Citrus Sinensis ID: 022386
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 298 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LTV6 | 298 | Peroxisomal 2,4-dienoyl-C | yes | no | 1.0 | 1.0 | 0.765 | 1e-119 | |
| Q5RBV3 | 292 | Peroxisomal 2,4-dienoyl-C | yes | no | 0.862 | 0.880 | 0.417 | 2e-47 | |
| Q6NV34 | 300 | Peroxisomal 2,4-dienoyl-C | yes | no | 0.865 | 0.86 | 0.413 | 7e-47 | |
| Q9NUI1 | 292 | Peroxisomal 2,4-dienoyl-C | yes | no | 0.852 | 0.869 | 0.415 | 2e-46 | |
| Q9WV68 | 292 | Peroxisomal 2,4-dienoyl-C | yes | no | 0.852 | 0.869 | 0.430 | 2e-44 | |
| Q9Z2M4 | 292 | Peroxisomal 2,4-dienoyl-C | yes | no | 0.859 | 0.876 | 0.416 | 2e-43 | |
| O34717 | 254 | Probable 2,4-dienoyl-CoA | yes | no | 0.838 | 0.984 | 0.366 | 1e-40 | |
| P32573 | 292 | Peroxisomal 2,4-dienoyl-C | yes | no | 0.842 | 0.859 | 0.378 | 4e-39 | |
| Q9WYG0 | 251 | Uncharacterized oxidoredu | no | no | 0.802 | 0.952 | 0.326 | 3e-29 | |
| Q9WVK3 | 303 | Peroxisomal trans-2-enoyl | no | no | 0.838 | 0.825 | 0.315 | 9e-29 |
| >sp|Q9LTV6|DECR2_ARATH Peroxisomal 2,4-dienoyl-CoA reductase OS=Arabidopsis thaliana GN=At3g12800 PE=2 SV=1 | Back alignment and function desciption |
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Score = 428 bits (1100), Expect = e-119, Method: Compositional matrix adjust.
Identities = 228/298 (76%), Positives = 257/298 (86%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
M+SPFK D+++G+VAL+TGGGSGIGFEIS Q GKHGA+IAIMGRRK VL AV+AL SLG
Sbjct: 1 MDSPFKPDVVRGQVALITGGGSGIGFEISSQFGKHGASIAIMGRRKQVLDDAVSALRSLG 60
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
I AIGLEGDVRK+EDA RVVE+T HFGKLDILVNAAAGNFL AEDLSPNGFRTV++ID
Sbjct: 61 IQAIGLEGDVRKQEDARRVVEATFQHFGKLDILVNAAAGNFLAAAEDLSPNGFRTVLDID 120
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
+VGTF MCH ALKYLKKG G+ SSS GG IINISATLHYTA+WYQIHVSAAKAAVD+ T
Sbjct: 121 AVGTFNMCHAALKYLKKGAPGRDSSSGGGSIINISATLHYTASWYQIHVSAAKAAVDATT 180
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
R+LALEWGTDY IRVNGIAPGPI T G+SKL PEEI +K +YM YK GEKWDIAMAA
Sbjct: 181 RNLALEWGTDYDIRVNGIAPGPIGGTPGMSKLVPEEIENKTREYMPLYKVGEKWDIAMAA 240
Query: 241 LYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKSRDSPVGIPKSRL 298
LYL+ D+GKYV+G T++VDGG WLS PR LPKEAV QLSRAVE++SR PVG+P S+L
Sbjct: 241 LYLSCDSGKYVSGLTMVVDGGLWLSKPRHLPKEAVKQLSRAVEKRSRAKPVGLPTSKL 298
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Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: 3EC: 4 |
| >sp|Q5RBV3|DECR2_PONAB Peroxisomal 2,4-dienoyl-CoA reductase OS=Pongo abelii GN=DECR2 PE=2 SV=1 | Back alignment and function description |
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Score = 189 bits (480), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/268 (41%), Positives = 150/268 (55%), Gaps = 11/268 (4%)
Query: 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPA 63
F D+L+ KVA +TGGGSGIGF I+ +HG I R VL +A + G
Sbjct: 21 FCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRC 80
Query: 64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
+ L DVR V V+ + FG++DIL+N AAGNFL PA LS N F+TV++ID+ G
Sbjct: 81 LPLSMDVRAPPAIVAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSG 140
Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
TF + + + GG+I+NI+ATL Q+H +AKAAVD++TR L
Sbjct: 141 TFNVSRVLYEKFFR--------DHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHL 192
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALY 242
A+EWG IRVN +APGPI T G+ +L P+ S + G K +IA + LY
Sbjct: 193 AVEWGPQN-IRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLY 251
Query: 243 LASDAGKYVNGNTLIVDGGNWLSNPRDL 270
LAS YV G L+ DGG WL+ P D+
Sbjct: 252 LASPLASYVTGAVLVADGGAWLTFPNDV 279
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Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA. Has activity towards short and medium chain 2,4-dienoyl-CoAs, but also towards 2,4,7,10,13,16,19-docosaheptaenoyl-CoA, suggesting that it does not constitute a rate limiting step in the peroxisomal degradation of docosahexaenoic acid. Pongo abelii (taxid: 9601) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 3 EC: 4 |
| >sp|Q6NV34|DECR2_DANRE Peroxisomal 2,4-dienoyl-CoA reductase OS=Danio rerio GN=decr2 PE=2 SV=1 | Back alignment and function description |
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Score = 187 bits (475), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 112/271 (41%), Positives = 154/271 (56%), Gaps = 13/271 (4%)
Query: 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPA 63
+ D+L +VA +TGGGSGIGF I+ L +HG I R + A L S G
Sbjct: 28 YSPDLLSDQVAFITGGGSGIGFRIAEVLMRHGCDTVIASRNLEKISQAAKKLTSTTGRRC 87
Query: 64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
+ + DVR+ E + V+ T+ FG++DIL+N AAGNFL PA LS N F+TV+EID++G
Sbjct: 88 LPIAMDVRQPETILAAVDETLKTFGRVDILINNAAGNFLCPATSLSFNAFKTVMEIDTMG 147
Query: 124 TFIMCHEAL-KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 182
TF K+ K GG I+NISATL Y Q+H +AKAA D++TR
Sbjct: 148 TFNTSKVIYDKWFK---------DHGGSIVNISATLGYRGQALQVHAGSAKAANDAMTRH 198
Query: 183 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK-ATDYMAAYKFGEKWDIAMAAL 241
LA+EWG +RVN +APGPI T G +L + A + + G K ++A A L
Sbjct: 199 LAVEWGPS-GVRVNTVAPGPISGTEGYRRLGGSHAETAGAFHSIPLQRAGNKTEMAHAVL 257
Query: 242 YLASDAGKYVNGNTLIVDGGNWLSNPRDLPK 272
+LAS A YV G+ L+ DGG WL++ D+ +
Sbjct: 258 FLASRASSYVTGSVLVADGGAWLTSANDVER 288
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Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA. Danio rerio (taxid: 7955) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 3 EC: 4 |
| >sp|Q9NUI1|DECR2_HUMAN Peroxisomal 2,4-dienoyl-CoA reductase OS=Homo sapiens GN=DECR2 PE=1 SV=1 | Back alignment and function description |
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Score = 186 bits (472), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/265 (41%), Positives = 148/265 (55%), Gaps = 11/265 (4%)
Query: 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPA 63
F D+L+ KVA +TGGGSGIGF I+ +HG I R VL +A + G
Sbjct: 21 FCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRC 80
Query: 64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
+ L DVR + V+ + FG++DIL+N AAGNFL PA LS N F+TV++ID+ G
Sbjct: 81 LPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSG 140
Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
TF + + + GG+I+NI+ATL Q+H +AKAAVD++TR L
Sbjct: 141 TFNVSRVLYEKFFR--------DHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHL 192
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALY 242
A+EWG IRVN +APGPI T G+ +L P+ S + G K +IA + LY
Sbjct: 193 AVEWGPQN-IRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLY 251
Query: 243 LASDAGKYVNGNTLIVDGGNWLSNP 267
LAS YV G L+ DGG WL+ P
Sbjct: 252 LASPLASYVTGAVLVADGGAWLTFP 276
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Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA. Has activity towards short and medium chain 2,4-dienoyl-CoAs, but also towards 2,4,7,10,13,16,19-docosaheptaenoyl-CoA, suggesting that it does not constitute a rate limiting step in the peroxisomal degradation of docosahexaenoic acid. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 3 EC: 4 |
| >sp|Q9WV68|DECR2_MOUSE Peroxisomal 2,4-dienoyl-CoA reductase OS=Mus musculus GN=Decr2 PE=1 SV=1 | Back alignment and function description |
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Score = 179 bits (454), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/265 (43%), Positives = 159/265 (60%), Gaps = 11/265 (4%)
Query: 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPA 63
F D+L+ KVA +TGGGSGIGF I+ +HG I+GR + V +A + + G
Sbjct: 21 FCPDLLQDKVAFITGGGSGIGFRIAEIFMRHGCHTVIVGRSLQKVTTAAKKLVAATGKRC 80
Query: 64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
+ L DVR + + V+ + FGK++IL+N AAGNFL PA LS N F+TV++ID++G
Sbjct: 81 LPLSMDVRVPPEVMTAVDQALQEFGKINILINCAAGNFLCPASALSFNAFKTVVDIDTIG 140
Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
TF + ++ Y KK R GG+I+NI+ATL Q+H AAKAAVD++TR L
Sbjct: 141 TFNV--SSVLY-KKFFRDH-----GGVIVNITATLSMRGQVLQLHAGAAKAAVDAMTRHL 192
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY-KFGEKWDIAMAALY 242
A+EWG IRVN +APG I T G+ +L SK + + G K +IA + LY
Sbjct: 193 AVEWGPQ-NIRVNSLAPGAISGTEGLRRLRGSNASSKLKHFSNPIPRLGTKTEIAHSVLY 251
Query: 243 LASDAGKYVNGNTLIVDGGNWLSNP 267
LAS YV+G L+VDGG+W++ P
Sbjct: 252 LASPLASYVSGIVLVVDGGSWMTFP 276
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Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA. Has activity towards short and medium chain 2,4-dienoyl-CoAs, but also towards 2,4,7,10,13,16,19-docosaheptaenoyl-CoA, suggesting that it does not constitute a rate limiting step in the peroxisomal degradation of docosahexaenoic acid. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 3 EC: 4 |
| >sp|Q9Z2M4|DECR2_RAT Peroxisomal 2,4-dienoyl-CoA reductase OS=Rattus norvegicus GN=Decr2 PE=2 SV=1 | Back alignment and function description |
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Score = 176 bits (446), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/269 (41%), Positives = 158/269 (58%), Gaps = 13/269 (4%)
Query: 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPA 63
F D+L+ KVA +TGGGSGIGF I+ +HG I+ R V +A + + G
Sbjct: 21 FCPDLLQDKVAFITGGGSGIGFRIAEIFMRHGCHTVIVSRSLPRVSEAAKKLVAATGKRC 80
Query: 64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
+ L DVR + V+ + FGK+DIL+N AAGNFL PA LS N F+TV++ID++G
Sbjct: 81 LPLSMDVRVPPAVMAAVDQALKEFGKIDILINCAAGNFLCPASALSFNAFKTVVDIDTLG 140
Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
TF + + + GG+I+NI+ATL Q+H AAKAAVD++TR L
Sbjct: 141 TFNVSRVLYEKFFR--------DHGGVIVNITATLSMRGQVLQLHAGAAKAAVDAMTRHL 192
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA--YKFGEKWDIAMAAL 241
A+EWG IRVN +APG I T G+ +L + SK Y+++ + G K +IA + L
Sbjct: 193 AVEWGPQ-NIRVNSLAPGAISGTEGLRRLGGPKASSK-FKYLSSPIPRLGTKTEIAHSVL 250
Query: 242 YLASDAGKYVNGNTLIVDGGNWLSNPRDL 270
YLAS YV+G L+VDGG+W++ P D+
Sbjct: 251 YLASPLASYVSGIVLVVDGGSWMTLPNDI 279
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Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA. Has activity towards short and medium chain 2,4-dienoyl-CoAs, but also towards 2,4,7,10,13,16,19-docosaheptaenoyl-CoA, suggesting that it does not constitute a rate limiting step in the peroxisomal degradation of docosahexaenoic acid. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 3 EC: 4 |
| >sp|O34717|FADH_BACSU Probable 2,4-dienoyl-CoA reductase OS=Bacillus subtilis (strain 168) GN=fadH PE=2 SV=1 | Back alignment and function description |
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Score = 167 bits (423), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/259 (36%), Positives = 144/259 (55%), Gaps = 9/259 (3%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
++ K ++TGG SG+G ++ + + G + + GR L + + + D
Sbjct: 1 MEKKAVIITGGSSGMGKAMAKKQAELGWHVMVTGRNHEALEETKKEIQTFEGQVACFQMD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
VR A +++ + FG+LD L+N AAGNF+ PAE L+PNG++ VIEI GTF C
Sbjct: 61 VRSDSAASDMIKEAVKAFGRLDALINNAAGNFICPAEKLTPNGWKAVIEIVLNGTFF-CS 119
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+A R G+I+N++AT + A +H +AAKA V S+TR+LA+EWG+
Sbjct: 120 QA------AARHWIDQKQQGVILNMAATYAWGAGAGVVHSAAAKAGVLSLTRTLAVEWGS 173
Query: 190 DYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
Y IR N IAPGPI+ T G KL E+ ++ + + + G +IA A +L SD
Sbjct: 174 KYGIRTNAIAPGPIERTGGAEKLFESEKAMARTMNSVPLGRLGTPEEIAALAAFLLSDEA 233
Query: 249 KYVNGNTLIVDGGNWLSNP 267
Y+NG+ + +DGG WL NP
Sbjct: 234 SYINGDCITMDGGQWL-NP 251
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Auxiliary enzyme of beta-oxidation. It participates in the metabolism of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA. Bacillus subtilis (strain 168) (taxid: 224308) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 3 EC: 4 |
| >sp|P32573|SPS19_YEAST Peroxisomal 2,4-dienoyl-CoA reductase SPS19 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SPS19 PE=1 SV=4 | Back alignment and function description |
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Score = 162 bits (409), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 144/267 (53%), Gaps = 16/267 (5%)
Query: 2 ESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG- 60
E ++ D+ KGKVA +TGG I + L G AI+GR + A + L
Sbjct: 14 EGSWRPDLFKGKVAFVTGGAGTICRVQTEALVLLGCKAAIVGRDQERTEQAAKGISQLAK 73
Query: 61 ----IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV 116
+ AI DVR E V+ T+ FGK+D ++ AAGNF+ +LSPN F++V
Sbjct: 74 DKDAVLAIA-NVDVRNFEQVENAVKKTVEKFGKIDFVIAGAAGNFVCDFANLSPNAFKSV 132
Query: 117 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 176
++ID +G+F LK LKK S G I+ +SAT HY +Q HV AAKA +
Sbjct: 133 VDIDLLGSFNTAKACLKELKK---------SKGSILFVSATFHYYGVPFQGHVGAAKAGI 183
Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
D++ ++LA+E G IR N IAPG I +T G+ +LA ++ + KA + + G DI
Sbjct: 184 DALAKNLAVELGP-LGIRSNCIAPGAIDNTEGLKRLAGKKYKEKALAKIPLQRLGSTRDI 242
Query: 237 AMAALYLASDAGKYVNGNTLIVDGGNW 263
A + +Y+ S A YV G L+VDGG W
Sbjct: 243 AESTVYIFSPAASYVTGTVLVVDGGMW 269
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Auxiliary enzyme of beta-oxidation. Participates in the degradation of unsaturated fatty enoyl-CoA esters having double bonds in both even- and odd-numbered positions in peroxisome. Catalyzes the NADP-dependent reduction of 2,4-dienoyl-CoA to yield trans-3-enoyl-CoA. Dispensable for growth and sporulation on solid acetate and oleate media, but is essential for these processes to occur on petroselineate. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 3 EC: 4 |
| >sp|Q9WYG0|Y325_THEMA Uncharacterized oxidoreductase TM_0325 OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=TM_0325 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 129 bits (323), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 142/260 (54%), Gaps = 21/260 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+GKV L+TG GSGIG + ++ + GA +AI + + V + S+G A + GD
Sbjct: 3 FQGKVVLITGAGSGIGKKAAVMFAERGAKVAINDISEEKGKETVELIKSMGGEAAFIFGD 62
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP---AEDLSPNGFRTVIEIDSVGTFI 126
V K DA ++V+ T+ FG+LDILVN A +VP E+ S F + ++ G F+
Sbjct: 63 VAK--DAEQIVKKTVETFGRLDILVNNAG---IVPYGNIEETSEEDFDKTMAVNVKGPFL 117
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
+ A++ +KK G GG+I+N+S+ + S +KAA+ +TRSLA++
Sbjct: 118 LSKYAVEQMKKQG--------GGVIVNVSSEAGLIGIPRRCVYSVSKAALLGLTRSLAVD 169
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLA----PEEIRSKATDYMAAYKFGEKWDIAMAALY 242
+ DY IRVN + PG + ++++ PEE+ K T + + G++ +IA A L+
Sbjct: 170 Y-VDYGIRVNAVCPGTTQSEGLMARVKASPNPEELLKKMTSRIPMKRLGKEEEIAFAILF 228
Query: 243 LASDAGKYVNGNTLIVDGGN 262
A D ++ G+ + +DGG+
Sbjct: 229 AACDEAGFMTGSIINIDGGS 248
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Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) (taxid: 243274) EC: 1 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q9WVK3|PECR_RAT Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus GN=Pecr PE=2 SV=1 | Back alignment and function description |
|---|
Score = 127 bits (319), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 139/273 (50%), Gaps = 23/273 (8%)
Query: 2 ESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGI 61
+S +L+ +VA++TGG +GIG IS +L G + I R+ L +AV L +
Sbjct: 8 QSYLAAGLLQNQVAVVTGGATGIGKAISRELLHLGCNVVIASRKLDRLTAAVDELRASQP 67
Query: 62 PA-----IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV 116
P+ ++ ++RK E+ +V+ST+ +GK++ LVN A G F+ PAED++ G++ V
Sbjct: 68 PSSSTQVTAIQCNIRKEEEVNNLVKSTLAKYGKINFLVNNAGGQFMAPAEDITAKGWQAV 127
Query: 117 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY---TATWYQIHVSAAK 173
IE + GTF MC K GG I+NI L+ TA H AA+
Sbjct: 128 IETNLTGTFYMCKAVYNSWMK--------DHGGSIVNIIVLLNNGFPTAA----HSGAAR 175
Query: 174 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP--EEIRSKATDYMAAYKFG 231
A V ++T+++AL W + +R+N +APG I V + + A + + A + G
Sbjct: 176 AGVYNLTKTMALTWASS-GVRINCVAPGTIYSQTAVDNYGELGQTMFEMAFENIPAKRVG 234
Query: 232 EKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 264
+I+ +L S A ++ G + VDGG L
Sbjct: 235 LPEEISPLVCFLLSPAASFITGQLINVDGGQAL 267
|
Participates in chain elongation of fatty acids. Has no 2,4-dienoyl-CoA reductase activity. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 3 EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 298 | ||||||
| 225423652 | 297 | PREDICTED: peroxisomal 2,4-dienoyl-CoA r | 0.996 | 1.0 | 0.815 | 1e-137 | |
| 255565323 | 298 | 2,4-dienoyl-CoA reductase, putative [Ric | 1.0 | 1.0 | 0.795 | 1e-137 | |
| 224120278 | 299 | predicted protein [Populus trichocarpa] | 1.0 | 0.996 | 0.791 | 1e-134 | |
| 225462240 | 297 | PREDICTED: peroxisomal 2,4-dienoyl-CoA r | 0.996 | 1.0 | 0.802 | 1e-134 | |
| 388502636 | 297 | unknown [Lotus japonicus] | 0.996 | 1.0 | 0.775 | 1e-132 | |
| 358248016 | 298 | uncharacterized protein LOC100793630 [Gl | 1.0 | 1.0 | 0.781 | 1e-128 | |
| 358249176 | 298 | uncharacterized protein LOC100800885 [Gl | 1.0 | 1.0 | 0.771 | 1e-127 | |
| 449444144 | 297 | PREDICTED: peroxisomal 2,4-dienoyl-CoA r | 0.996 | 1.0 | 0.765 | 1e-127 | |
| 297834090 | 298 | short-chain dehydrogenase/reductase fami | 1.0 | 1.0 | 0.765 | 1e-124 | |
| 388519645 | 275 | unknown [Lotus japonicus] | 0.919 | 0.996 | 0.792 | 1e-122 |
| >gi|225423652|ref|XP_002275982.1| PREDICTED: peroxisomal 2,4-dienoyl-CoA reductase [Vitis vinifera] gi|147772171|emb|CAN73418.1| hypothetical protein VITISV_019955 [Vitis vinifera] gi|297737992|emb|CBI27193.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 493 bits (1268), Expect = e-137, Method: Compositional matrix adjust.
Identities = 243/298 (81%), Positives = 270/298 (90%), Gaps = 1/298 (0%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
MESPF+GDILKGKVALLTGGGSGIG+EIS QLGKHGA+IAIMGRR+ VL +AV++LHSLG
Sbjct: 1 MESPFRGDILKGKVALLTGGGSGIGYEISRQLGKHGASIAIMGRRRQVLDAAVSSLHSLG 60
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
IPAIGLEGDVRK+EDAVRV+ESTI HFG+LDILVNAAAGNFLVPAEDLSP GF+TVI+ID
Sbjct: 61 IPAIGLEGDVRKQEDAVRVLESTIKHFGRLDILVNAAAGNFLVPAEDLSPKGFQTVIDID 120
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
SVGTF MCHEAL+YLKKGG G+ S S+GGIIINISATLHYTATWYQIHVSAAKAAVDSIT
Sbjct: 121 SVGTFTMCHEALQYLKKGGPGK-SPSTGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 179
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
RSLALEWGTDY IRVNGIAPGPI DTAG+SKLAPE++ KA ++ +K GEKWDIAMAA
Sbjct: 180 RSLALEWGTDYDIRVNGIAPGPIDDTAGLSKLAPEDVVRKAKEHEPLFKLGEKWDIAMAA 239
Query: 241 LYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKSRDSPVGIPKSRL 298
+YLAS+AGKY+NG TL VDGG WLS PR L KEAV QLSRAVER+SR VG+PKS+L
Sbjct: 240 VYLASNAGKYINGTTLTVDGGLWLSKPRHLSKEAVKQLSRAVERRSRKILVGVPKSKL 297
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255565323|ref|XP_002523653.1| 2,4-dienoyl-CoA reductase, putative [Ricinus communis] gi|223537105|gb|EEF38739.1| 2,4-dienoyl-CoA reductase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 492 bits (1267), Expect = e-137, Method: Compositional matrix adjust.
Identities = 237/298 (79%), Positives = 270/298 (90%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
MESPFKGDILKGKVAL+TGGGSGIG+EISLQLGKHGA+IAIMGRRK VL SAVA+LHSLG
Sbjct: 1 MESPFKGDILKGKVALITGGGSGIGYEISLQLGKHGASIAIMGRRKNVLLSAVASLHSLG 60
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
IPAIGLEGDVRK++DAV+++EST+ HFG+LDILVNAAAGNFLV +EDLSPNGFRTVI+ID
Sbjct: 61 IPAIGLEGDVRKKDDAVKILESTVRHFGRLDILVNAAAGNFLVASEDLSPNGFRTVIDID 120
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
SVGTF MCHEA KYLKKGG+G+ S+ GGIIINISATLHYTATWYQIHVSAAKAAVDSIT
Sbjct: 121 SVGTFTMCHEAFKYLKKGGQGKDPSTGGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
RSLALEWGT+Y I+VNGIAPGPI DTAG+SKLAPEEI +A + + K GEKWDIAMAA
Sbjct: 181 RSLALEWGTEYDIKVNGIAPGPIGDTAGLSKLAPEEILREAKEKLPLDKLGEKWDIAMAA 240
Query: 241 LYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKSRDSPVGIPKSRL 298
LYL SDAGK+VNG L+VDGG+WL P LPK+AV QLSR VE++S+++PVG+PKS+L
Sbjct: 241 LYLTSDAGKHVNGTILVVDGGDWLRKPPHLPKDAVKQLSRVVEKRSKNAPVGVPKSKL 298
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224120278|ref|XP_002318290.1| predicted protein [Populus trichocarpa] gi|222858963|gb|EEE96510.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 236/298 (79%), Positives = 266/298 (89%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
+ESPFK +IL+GKVALLTGGGSGIG+EISLQLGKHGA+IAIMGRRK V+ SAV++L+SLG
Sbjct: 2 VESPFKPEILRGKVALLTGGGSGIGYEISLQLGKHGASIAIMGRRKHVVDSAVSSLNSLG 61
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
IPAIG EGDVRKREDA+RVVEST HFG+LDILVNAAAGNFLVP+EDLS NGFRTV++ID
Sbjct: 62 IPAIGFEGDVRKREDAIRVVESTFKHFGRLDILVNAAAGNFLVPSEDLSSNGFRTVMDID 121
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
SVGTF MCHEALKYLKKGG G+ S++GG IINISATLHYTATWYQIHVSAAKAAVDSIT
Sbjct: 122 SVGTFTMCHEALKYLKKGGLGKDPSTAGGTIINISATLHYTATWYQIHVSAAKAAVDSIT 181
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
R+LALEWGTDY IRVNGIAPGPI DTAG+SKL E I SKA + M +K GEKWDIAMAA
Sbjct: 182 RNLALEWGTDYDIRVNGIAPGPIGDTAGMSKLGLEGILSKAMEKMPLFKVGEKWDIAMAA 241
Query: 241 LYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKSRDSPVGIPKSRL 298
+YLASDAGKYVNG TL+VDGG WLS PR PK+AV QLSR VE++S+ +P GIP+S+L
Sbjct: 242 VYLASDAGKYVNGTTLVVDGGEWLSKPRHFPKDAVKQLSRVVEKRSKHAPAGIPRSKL 299
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225462240|ref|XP_002262755.1| PREDICTED: peroxisomal 2,4-dienoyl-CoA reductase [Vitis vinifera] gi|297736138|emb|CBI24176.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 239/298 (80%), Positives = 262/298 (87%), Gaps = 1/298 (0%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
MESPFK D+LKGKVALLTGGGSGIGFEIS Q G HGA+IAIMGRRK VL SAV+ L S G
Sbjct: 1 MESPFKADVLKGKVALLTGGGSGIGFEISTQFGLHGASIAIMGRRKQVLDSAVSGLCSQG 60
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
IPA+G GDVRK+EDA RVVEST+ HFG+LDILVNAAAGNFLV +EDLSPNGFRTV++ID
Sbjct: 61 IPAVGFVGDVRKQEDAKRVVESTVKHFGRLDILVNAAAGNFLVSSEDLSPNGFRTVMDID 120
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
SVGTF MCHEALKYLKKGG G+ S SSGG I+NISATLHYTA WYQIHVSAAKAAVD+ T
Sbjct: 121 SVGTFTMCHEALKYLKKGGPGR-SFSSGGSILNISATLHYTAAWYQIHVSAAKAAVDATT 179
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
R+LALEWGTDY IRVNGIAPGPI DTAG+SKLAPEEI +KA + M YK GEKWDIAMAA
Sbjct: 180 RNLALEWGTDYDIRVNGIAPGPIGDTAGMSKLAPEEISNKAREIMPLYKLGEKWDIAMAA 239
Query: 241 LYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKSRDSPVGIPKSRL 298
LYLASDAGKY+NG TL+VDGG WLS PR LPKEAV QLSRAVE++SR PVG+PKS+L
Sbjct: 240 LYLASDAGKYINGTTLVVDGGLWLSRPRHLPKEAVKQLSRAVEKRSRGVPVGVPKSKL 297
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388502636|gb|AFK39384.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 476 bits (1224), Expect = e-132, Method: Compositional matrix adjust.
Identities = 231/298 (77%), Positives = 260/298 (87%), Gaps = 1/298 (0%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
MESPFKG+ILKGKVAL+TGG SGIGFEIS Q GKHGA++A+MGRRK VL SAV+ L SL
Sbjct: 1 MESPFKGNILKGKVALITGGASGIGFEISTQFGKHGASVALMGRRKQVLDSAVSVLQSLS 60
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
IPAIG GDVRK+EDA RVVEST HFGK+DILVNAAAGNFLV AEDLSPNGFRTV++ID
Sbjct: 61 IPAIGFVGDVRKQEDAARVVESTFKHFGKIDILVNAAAGNFLVSAEDLSPNGFRTVLDID 120
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
SVGTF MC EALKYLKKGG G+ SS +G II NISATLHYTA+WYQIHVSAAKAAVD+ T
Sbjct: 121 SVGTFTMCSEALKYLKKGGLGRGSSGAGAII-NISATLHYTASWYQIHVSAAKAAVDATT 179
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
R+LALEWGTDY IRVNGIAPGPI T G+SKLAP+EI +K+ DYM YK GEKWDIAMAA
Sbjct: 180 RNLALEWGTDYDIRVNGIAPGPISGTPGMSKLAPDEINNKSKDYMPLYKEGEKWDIAMAA 239
Query: 241 LYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKSRDSPVGIPKSRL 298
L+L SDAGKY+NG+TLIVDGG WLS PR LPKEAV Q SRA+E++SR+ P+G+PKS+L
Sbjct: 240 LFLVSDAGKYINGDTLIVDGGLWLSRPRHLPKEAVKQASRAIEKRSRNQPIGVPKSKL 297
|
Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|358248016|ref|NP_001239792.1| uncharacterized protein LOC100793630 [Glycine max] gi|255647355|gb|ACU24144.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 233/298 (78%), Positives = 265/298 (88%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
MESPFK +ILKGKVAL+TGG SGIGFEIS Q GKHGA++A+MGRRK VL+SAV+ L SL
Sbjct: 1 MESPFKPEILKGKVALITGGASGIGFEISTQFGKHGASVALMGRRKQVLQSAVSVLQSLV 60
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
IPA+G EGDVRK+EDA RVVEST HFG++DILVNAAAGNFLV AEDLS NGFRTV++ID
Sbjct: 61 IPAVGFEGDVRKQEDAARVVESTFKHFGRIDILVNAAAGNFLVSAEDLSSNGFRTVLDID 120
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
SVGTF MCHEALKYLKKGG G+++SSSGG IINISATLHYTA+WYQIHVSAAKAAVD+ T
Sbjct: 121 SVGTFTMCHEALKYLKKGGEGRSNSSSGGSIINISATLHYTASWYQIHVSAAKAAVDATT 180
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
R+LALEWGTDY IRVNGIAPGPI T G+SKLAP+EI SKA DYM YK GEKWDIAMAA
Sbjct: 181 RNLALEWGTDYDIRVNGIAPGPISGTPGMSKLAPDEISSKARDYMPLYKLGEKWDIAMAA 240
Query: 241 LYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKSRDSPVGIPKSRL 298
L+LASDAGK+VNG+T+IVDGG WLS PR L KEAV Q+SR+VE++SR+ PVG+PKS+L
Sbjct: 241 LFLASDAGKFVNGDTMIVDGGLWLSRPRHLEKEAVKQVSRSVEKRSRNVPVGVPKSKL 298
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|358249176|ref|NP_001240261.1| uncharacterized protein LOC100800885 [Glycine max] gi|255644975|gb|ACU22987.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 230/298 (77%), Positives = 264/298 (88%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
MESPF+ +ILKGKVAL+TGG SGIGFEIS Q GKHGA++A+MGRRK VL+SAV+ L SL
Sbjct: 1 MESPFRPEILKGKVALITGGASGIGFEISTQFGKHGASVALMGRRKQVLQSAVSVLQSLA 60
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
IPA+G EGDVRK+EDAVRVVEST HFG++DILVNAAAGNFLV AEDLSPNGFRTV++ID
Sbjct: 61 IPAVGFEGDVRKQEDAVRVVESTFKHFGRIDILVNAAAGNFLVSAEDLSPNGFRTVLDID 120
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
SVGTF MCHEALKYLKKGG G+++SSSGG IINISATLHYTA+WYQIHVSAAKAAVD+ T
Sbjct: 121 SVGTFTMCHEALKYLKKGGEGRSNSSSGGSIINISATLHYTASWYQIHVSAAKAAVDATT 180
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
R+LALEWGTDY IRVNGIAPGPI DT G+SKLAP+EI SKA DYM YK GEKWDIAMAA
Sbjct: 181 RNLALEWGTDYDIRVNGIAPGPISDTPGMSKLAPDEISSKARDYMPLYKLGEKWDIAMAA 240
Query: 241 LYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKSRDSPVGIPKSRL 298
L+L SDAGK++NG+ +IVDGG WLS PR L KEAV Q+SR+VE +SR++ V +PKS+L
Sbjct: 241 LFLVSDAGKFINGDIMIVDGGLWLSRPRHLAKEAVKQVSRSVENRSRNASVSVPKSKL 298
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449444144|ref|XP_004139835.1| PREDICTED: peroxisomal 2,4-dienoyl-CoA reductase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/298 (76%), Positives = 256/298 (85%), Gaps = 1/298 (0%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
M SPF+ DIL+GKVAL+TGGGSGIGFEI+ Q G+HGA+IAIMGRRK VL SAVAAL SLG
Sbjct: 1 MASPFRSDILRGKVALITGGGSGIGFEIATQFGQHGASIAIMGRRKQVLDSAVAALRSLG 60
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
I A G EGDVRK+EDA VV+ST N G LDILVNAAAGNFLV AEDLSPNGFRTV++ID
Sbjct: 61 ISAFGFEGDVRKQEDASSVVDSTFNKLGSLDILVNAAAGNFLVSAEDLSPNGFRTVMDID 120
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
SVGTF MCH+ALKYLKKGG G+ +S +GG IINISATLHYTA WYQIHVSAAKAAVD+IT
Sbjct: 121 SVGTFTMCHQALKYLKKGGPGR-NSLTGGTIINISATLHYTAAWYQIHVSAAKAAVDAIT 179
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
R+LALEWG D+ IRVNGIAPGPI+ T G+SKLAPEEI SK + M Y+ GEKWDIAMAA
Sbjct: 180 RNLALEWGADHDIRVNGIAPGPIQGTPGLSKLAPEEINSKIREDMPLYRIGEKWDIAMAA 239
Query: 241 LYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKSRDSPVGIPKSRL 298
LYLASDAGKYVNG T+I DGG WLS+PR LPK+AV QLSR VE++SR+ PVG PKS+L
Sbjct: 240 LYLASDAGKYVNGTTIIADGGMWLSSPRRLPKDAVKQLSRVVEKRSRNLPVGAPKSKL 297
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297834090|ref|XP_002884927.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata] gi|297330767|gb|EFH61186.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/298 (76%), Positives = 258/298 (86%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
MESPFK D+++G+VAL+TGGGSGIGFEIS Q GKHGA+IAIMGRRK VL AV+AL SLG
Sbjct: 1 MESPFKPDVVRGQVALITGGGSGIGFEISSQFGKHGASIAIMGRRKQVLDDAVSALRSLG 60
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
I AIGLEGDVRK+EDA RVVE+T HFG++DILVNAAAGNFL AEDLSPNGFRTV++ID
Sbjct: 61 IQAIGLEGDVRKQEDARRVVEATYQHFGRIDILVNAAAGNFLAAAEDLSPNGFRTVLDID 120
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
+VGTF MCH ALKYLKKGG G+ SS+ GG IINISATLHYTA+WYQIHVSAAKAAVD+ T
Sbjct: 121 AVGTFNMCHAALKYLKKGGPGRDSSTGGGSIINISATLHYTASWYQIHVSAAKAAVDATT 180
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
R+LALEWGTDY IRVNGIAPGPI T G+SKL PEEI +K +YM YK GEKWDIAMAA
Sbjct: 181 RNLALEWGTDYDIRVNGIAPGPIGGTPGMSKLVPEEIENKTREYMPLYKLGEKWDIAMAA 240
Query: 241 LYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKSRDSPVGIPKSRL 298
LYL+ D+GKYVNG T++VDGG WLS PR LPKEAV QLSRAVE++SR PVG+P S+L
Sbjct: 241 LYLSCDSGKYVNGLTVVVDGGLWLSKPRHLPKEAVKQLSRAVEKRSRAKPVGLPTSKL 298
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388519645|gb|AFK47884.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/275 (79%), Positives = 240/275 (87%), Gaps = 1/275 (0%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
MESPFKG+ILKGKVAL+TGG SGIGFEIS Q GKHGA++A+MGRRK VL SAV+ L SL
Sbjct: 1 MESPFKGNILKGKVALITGGASGIGFEISTQFGKHGASVALMGRRKQVLDSAVSVLQSLS 60
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
IPAIG GDVRK+EDA RVVEST HFGK+DILVNAAAGNFLV AEDLSPNGFRTV++ID
Sbjct: 61 IPAIGFVGDVRKQEDAARVVESTFKHFGKIDILVNAAAGNFLVSAEDLSPNGFRTVLDID 120
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
SVGTF MC EALKYLKKGG G+ SS +G IINISATLHYTA+WYQIHVSAAKAAVD+ T
Sbjct: 121 SVGTFTMCSEALKYLKKGGLGRGSSGAGA-IINISATLHYTASWYQIHVSAAKAAVDATT 179
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
R+LALEWGTDY IRVNGIAPGPI T G+SKLAP+EI +K+ DYM YK GEKWDIAMAA
Sbjct: 180 RNLALEWGTDYDIRVNGIAPGPISGTPGMSKLAPDEINNKSKDYMPLYKGGEKWDIAMAA 239
Query: 241 LYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAV 275
L+L SDAGKY+NG+TLIVDGG WLS PR LPKEAV
Sbjct: 240 LFLVSDAGKYINGDTLIVDGGLWLSRPRHLPKEAV 274
|
Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 298 | ||||||
| TAIR|locus:2087770 | 298 | SDRB "short-chain dehydrogenas | 1.0 | 1.0 | 0.724 | 2.9e-112 | |
| UNIPROTKB|F1NG68 | 308 | LOC100858408 "Uncharacterized | 0.845 | 0.818 | 0.426 | 3.8e-46 | |
| TAIR|locus:3437247 | 156 | AT2G07640 [Arabidopsis thalian | 0.493 | 0.942 | 0.639 | 3.4e-45 | |
| MGI|MGI:1347059 | 292 | Decr2 "2-4-dienoyl-Coenzyme A | 0.862 | 0.880 | 0.399 | 1.2e-42 | |
| RGD|71002 | 292 | Decr2 "2,4-dienoyl CoA reducta | 0.859 | 0.876 | 0.405 | 4e-42 | |
| ZFIN|ZDB-GENE-040426-2612 | 300 | decr2 "2,4-dienoyl CoA reducta | 0.869 | 0.863 | 0.385 | 6.6e-42 | |
| UNIPROTKB|F1PEZ3 | 266 | DECR2 "Uncharacterized protein | 0.842 | 0.943 | 0.412 | 2.2e-41 | |
| UNIPROTKB|Q5RBV3 | 292 | DECR2 "Peroxisomal 2,4-dienoyl | 0.862 | 0.880 | 0.406 | 2.2e-41 | |
| UNIPROTKB|Q9NUI1 | 292 | DECR2 "Peroxisomal 2,4-dienoyl | 0.852 | 0.869 | 0.403 | 2e-40 | |
| UNIPROTKB|F1RGV4 | 320 | DECR2 "Uncharacterized protein | 0.859 | 0.8 | 0.401 | 2e-40 |
| TAIR|locus:2087770 SDRB "short-chain dehydrogenase-reductase B" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1108 (395.1 bits), Expect = 2.9e-112, P = 2.9e-112
Identities = 216/298 (72%), Positives = 244/298 (81%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
M+SPFK D+++G+VAL+TGGGSGIGFEIS Q GKHGA+IAIMGRRK VL AV+AL SLG
Sbjct: 1 MDSPFKPDVVRGQVALITGGGSGIGFEISSQFGKHGASIAIMGRRKQVLDDAVSALRSLG 60
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
I AIGLEGDVRK+EDA RVVE+T HFGKLDILVNAAAGNFL AEDLSPNGFRTV++ID
Sbjct: 61 IQAIGLEGDVRKQEDARRVVEATFQHFGKLDILVNAAAGNFLAAAEDLSPNGFRTVLDID 120
Query: 121 SVGTFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSIT 180
+VGTF MCH ALKYLKK ATLHYTA+WYQIHVSAAKAAVD+ T
Sbjct: 121 AVGTFNMCHAALKYLKKGAPGRDSSSGGGSIINISATLHYTASWYQIHVSAAKAAVDATT 180
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
R+LALEWGTDY IRVNGIAPGPI T G+SKL PEEI +K +YM YK GEKWDIAMAA
Sbjct: 181 RNLALEWGTDYDIRVNGIAPGPIGGTPGMSKLVPEEIENKTREYMPLYKVGEKWDIAMAA 240
Query: 241 LYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKSRDSPVGIPKSRL 298
LYL+ D+GKYV+G T++VDGG WLS PR LPKEAV QLSRAVE++SR PVG+P S+L
Sbjct: 241 LYLSCDSGKYVSGLTMVVDGGLWLSKPRHLPKEAVKQLSRAVEKRSRAKPVGLPTSKL 298
|
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| UNIPROTKB|F1NG68 LOC100858408 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
Identities = 113/265 (42%), Positives = 157/265 (59%)
Query: 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPA 63
F DIL G+VA +TGGGSGIGF I+ +HG AI GR ++ V++++ + + G
Sbjct: 35 FSPDILAGRVAFITGGGSGIGFRIAEIFMRHGCRTAIAGRNQQRVVQASKKLVVATGQQC 94
Query: 64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
+ L DVR+ + V V+ T+ F ++DILVN AAGNFL PA LS N F+TV++ID++G
Sbjct: 95 LPLSIDVRQPQTIVAAVDETLKQFKQIDILVNGAAGNFLCPASALSFNAFKTVMDIDTLG 154
Query: 124 TFIMCHEAL-KYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRS 182
TF KY + ATL Y Q+H +AKAA+D++TR
Sbjct: 155 TFNTSKVLFEKYFRDHGGVIINIT---------ATLSYRGQALQVHAGSAKAAIDAMTRH 205
Query: 183 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR-SKATDYMAAYKFGEKWDIAMAAL 241
LA+EWG + IRVN +APGPI T G +L + + SK D + + G K +IA +AL
Sbjct: 206 LAVEWGPNN-IRVNSLAPGPITGTEGFRRLGGKFAKDSKQFDTIPLQRAGNKTEIAHSAL 264
Query: 242 YLASDAGKYVNGNTLIVDGGNWLSN 266
YLAS YV G TL+VDGG+WL++
Sbjct: 265 YLASPLSSYVTGTTLVVDGGSWLTS 289
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| TAIR|locus:3437247 AT2G07640 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
Identities = 94/147 (63%), Positives = 106/147 (72%)
Query: 127 MCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
MCH ALKYLKK ATLHYTA+ YQIHVSAAK AVD+ TR+LALE
Sbjct: 1 MCHAALKYLKKVAPGRDSSSGGGSIINISATLHYTASRYQIHVSAAKVAVDATTRNLALE 60
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
WGTDY IRVNGIA GPI T G+SKL PEEI +K +YM YK GEKWDIAMAALYL+ D
Sbjct: 61 WGTDYDIRVNGIATGPIGGTPGMSKLVPEEIENKTREYMPLYKLGEKWDIAMAALYLSCD 120
Query: 247 AGKYVNGNTLIVDGGNWLSNPRDLPKE 273
+GKY++G T++VDGG LS PR L KE
Sbjct: 121 SGKYMSGLTMVVDGGLCLSKPRHLAKE 147
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| MGI|MGI:1347059 Decr2 "2-4-dienoyl-Coenzyme A reductase 2, peroxisomal" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 107/268 (39%), Positives = 150/268 (55%)
Query: 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPA 63
F D+L+ KVA +TGGGSGIGF I+ +HG I+GR + V +A + + G
Sbjct: 21 FCPDLLQDKVAFITGGGSGIGFRIAEIFMRHGCHTVIVGRSLQKVTTAAKKLVAATGKRC 80
Query: 64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
+ L DVR + + V+ + FGK++IL+N AAGNFL PA LS N F+TV++ID++G
Sbjct: 81 LPLSMDVRVPPEVMTAVDQALQEFGKINILINCAAGNFLCPASALSFNAFKTVVDIDTIG 140
Query: 124 TFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSL 183
TF + ++ Y K ATL Q+H AAKAAVD++TR L
Sbjct: 141 TFNV--SSVLYKK------FFRDHGGVIVNITATLSMRGQVLQLHAGAAKAAVDAMTRHL 192
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY-KFGEKWDIAMAALY 242
A+EWG IRVN +APG I T G+ +L SK + + G K +IA + LY
Sbjct: 193 AVEWGPQN-IRVNSLAPGAISGTEGLRRLRGSNASSKLKHFSNPIPRLGTKTEIAHSVLY 251
Query: 243 LASDAGKYVNGNTLIVDGGNWLSNPRDL 270
LAS YV+G L+VDGG+W++ P +
Sbjct: 252 LASPLASYVSGIVLVVDGGSWMTFPNGI 279
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| RGD|71002 Decr2 "2,4-dienoyl CoA reductase 2, peroxisomal" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 109/269 (40%), Positives = 151/269 (56%)
Query: 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPA 63
F D+L+ KVA +TGGGSGIGF I+ +HG I+ R V +A + + G
Sbjct: 21 FCPDLLQDKVAFITGGGSGIGFRIAEIFMRHGCHTVIVSRSLPRVSEAAKKLVAATGKRC 80
Query: 64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
+ L DVR + V+ + FGK+DIL+N AAGNFL PA LS N F+TV++ID++G
Sbjct: 81 LPLSMDVRVPPAVMAAVDQALKEFGKIDILINCAAGNFLCPASALSFNAFKTVVDIDTLG 140
Query: 124 TFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSL 183
TF + + Y K ATL Q+H AAKAAVD++TR L
Sbjct: 141 TFNVSR--VLYEK------FFRDHGGVIVNITATLSMRGQVLQLHAGAAKAAVDAMTRHL 192
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY--KFGEKWDIAMAAL 241
A+EWG IRVN +APG I T G+ +L + SK Y+++ + G K +IA + L
Sbjct: 193 AVEWGPQN-IRVNSLAPGAISGTEGLRRLGGPKASSKFK-YLSSPIPRLGTKTEIAHSVL 250
Query: 242 YLASDAGKYVNGNTLIVDGGNWLSNPRDL 270
YLAS YV+G L+VDGG+W++ P D+
Sbjct: 251 YLASPLASYVSGIVLVVDGGSWMTLPNDI 279
|
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| ZFIN|ZDB-GENE-040426-2612 decr2 "2,4-dienoyl CoA reductase 2, peroxisomal" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
Identities = 104/270 (38%), Positives = 145/270 (53%)
Query: 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPA 63
+ D+L +VA +TGGGSGIGF I+ L +HG I R + A L S G
Sbjct: 28 YSPDLLSDQVAFITGGGSGIGFRIAEVLMRHGCDTVIASRNLEKISQAAKKLTSTTGRRC 87
Query: 64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
+ + DVR+ E + V+ T+ FG++DIL+N AAGNFL PA LS N F+TV+EID++G
Sbjct: 88 LPIAMDVRQPETILAAVDETLKTFGRVDILINNAAGNFLCPATSLSFNAFKTVMEIDTMG 147
Query: 124 TFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSL 183
TF K ATL Y Q+H +AKAA D++TR L
Sbjct: 148 TF--------NTSKVIYDKWFKDHGGSIVNISATLGYRGQALQVHAGSAKAANDAMTRHL 199
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY-MAAYKFGEKWDIAMAALY 242
A+EWG +RVN +APGPI T G +L + + + + G K ++A A L+
Sbjct: 200 AVEWGPS-GVRVNTVAPGPISGTEGYRRLGGSHAETAGAFHSIPLQRAGNKTEMAHAVLF 258
Query: 243 LASDAGKYVNGNTLIVDGGNWLSNPRDLPK 272
LAS A YV G+ L+ DGG WL++ D+ +
Sbjct: 259 LASRASSYVTGSVLVADGGAWLTSANDVER 288
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| UNIPROTKB|F1PEZ3 DECR2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 439 (159.6 bits), Expect = 2.2e-41, P = 2.2e-41
Identities = 109/264 (41%), Positives = 143/264 (54%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEG 68
L+ KVA +TGGGSGIGF I+ +HG I R V ++A + G + L
Sbjct: 1 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSFPRVSKAARKLAAATGQRCLPLSL 60
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DVR V+ + FGK+DILVN AAGNFL PA LS N F+TV++IDS+GTF M
Sbjct: 61 DVRAFPAITAAVDQALKEFGKIDILVNCAAGNFLCPASALSFNAFKTVMDIDSLGTFNMS 120
Query: 129 HEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
+ Y K ATL Q+H +AKAAVD++TR LA+EWG
Sbjct: 121 R--VLYEK------FFRDHGGVIVNITATLGTRGQVLQVHAGSAKAAVDAMTRHLAVEWG 172
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEE--IRSKATDYMAAYKFGEKWDIAMAALYLASD 246
IR+N +APGPI T G +L + + +K D + + G K ++A ALYLAS
Sbjct: 173 PQN-IRINSLAPGPISGTEGFRRLGGHQASVSTKVLD-IPLQRLGNKTEVAHGALYLASP 230
Query: 247 AGKYVNGNTLIVDGGNWLSNPRDL 270
Y+ G L+VDGG WL+ P DL
Sbjct: 231 LTSYMTGAVLVVDGGAWLTFPNDL 254
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| UNIPROTKB|Q5RBV3 DECR2 "Peroxisomal 2,4-dienoyl-CoA reductase" [Pongo abelii (taxid:9601)] | Back alignment and assigned GO terms |
|---|
Score = 439 (159.6 bits), Expect = 2.2e-41, P = 2.2e-41
Identities = 109/268 (40%), Positives = 143/268 (53%)
Query: 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPA 63
F D+L+ KVA +TGGGSGIGF I+ +HG I R VL +A + G
Sbjct: 21 FCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRC 80
Query: 64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
+ L DVR V V+ + FG++DIL+N AAGNFL PA LS N F+TV++ID+ G
Sbjct: 81 LPLSMDVRAPPAIVAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSG 140
Query: 124 TFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSL 183
TF + + Y K ATL Q+H +AKAAVD++TR L
Sbjct: 141 TFNVSR--VLYEK------FFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHL 192
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALY 242
A+EWG IRVN +APGPI T G+ +L P+ S + G K +IA + LY
Sbjct: 193 AVEWGPQN-IRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLY 251
Query: 243 LASDAGKYVNGNTLIVDGGNWLSNPRDL 270
LAS YV G L+ DGG WL+ P D+
Sbjct: 252 LASPLASYVTGAVLVADGGAWLTFPNDV 279
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| UNIPROTKB|Q9NUI1 DECR2 "Peroxisomal 2,4-dienoyl-CoA reductase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 107/265 (40%), Positives = 141/265 (53%)
Query: 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPA 63
F D+L+ KVA +TGGGSGIGF I+ +HG I R VL +A + G
Sbjct: 21 FCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRC 80
Query: 64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
+ L DVR + V+ + FG++DIL+N AAGNFL PA LS N F+TV++ID+ G
Sbjct: 81 LPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSG 140
Query: 124 TFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSL 183
TF + + Y K ATL Q+H +AKAAVD++TR L
Sbjct: 141 TFNVSR--VLYEK------FFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHL 192
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALY 242
A+EWG IRVN +APGPI T G+ +L P+ S + G K +IA + LY
Sbjct: 193 AVEWGPQN-IRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLY 251
Query: 243 LASDAGKYVNGNTLIVDGGNWLSNP 267
LAS YV G L+ DGG WL+ P
Sbjct: 252 LASPLASYVTGAVLVADGGAWLTFP 276
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| UNIPROTKB|F1RGV4 DECR2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 108/269 (40%), Positives = 143/269 (53%)
Query: 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPA 63
F D+L+ KVA +TGGGSGIGF I+ +HG I R + +A L + G
Sbjct: 49 FCPDLLQDKVAFITGGGSGIGFRIAELFMRHGCHTVIASRSLPRVSTAARKLAAATGQTC 108
Query: 64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
+ L DVR V VE + GK+DILVN AAGNFL PA LSPN F+ V++ D++G
Sbjct: 109 LPLSLDVRVPATIVAAVEQALQGLGKVDILVNCAAGNFLCPASALSPNAFKAVLDTDTLG 168
Query: 124 TFIMCHEALKYLKKXXXXXXXXXXXXXXXXXXATLHYTATWYQIHVSAAKAAVDSITRSL 183
TF MC + Y K ATL Q+H +AKAAVD++TR L
Sbjct: 169 TFNMCR--VLYEK------FFRDHGGVIVNITATLGTRGQVLQVHAGSAKAAVDAMTRHL 220
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA--YKFGEKWDIAMAAL 241
A+EW IRVN +A GPI T G +L T+ +A + G K ++A +AL
Sbjct: 221 AVEWAPQN-IRVNSLALGPISGTEGFRRLGGLNA-GLHTETLAGPQQRLGNKTEVAHSAL 278
Query: 242 YLASDAGKYVNGNTLIVDGGNWLSNPRDL 270
+LAS YV G L+VDGG W++ P D+
Sbjct: 279 FLASPLASYVTGAVLVVDGGTWMTFPNDV 307
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P32573 | SPS19_YEAST | 1, ., 3, ., 1, ., 3, 4 | 0.3782 | 0.8422 | 0.8595 | yes | no |
| Q9NUI1 | DECR2_HUMAN | 1, ., 3, ., 1, ., 3, 4 | 0.4150 | 0.8523 | 0.8698 | yes | no |
| Q22230 | YVX3_CAEEL | 1, ., -, ., -, ., - | 0.3167 | 0.8355 | 0.8058 | yes | no |
| Q9LTV6 | DECR2_ARATH | 1, ., 3, ., 1, ., 3, 4 | 0.7651 | 1.0 | 1.0 | yes | no |
| O34717 | FADH_BACSU | 1, ., 3, ., 1, ., 3, 4 | 0.3667 | 0.8389 | 0.9842 | yes | no |
| Q5RBV3 | DECR2_PONAB | 1, ., 3, ., 1, ., 3, 4 | 0.4179 | 0.8624 | 0.8801 | yes | no |
| Q9WV68 | DECR2_MOUSE | 1, ., 3, ., 1, ., 3, 4 | 0.4301 | 0.8523 | 0.8698 | yes | no |
| Q6NV34 | DECR2_DANRE | 1, ., 3, ., 1, ., 3, 4 | 0.4132 | 0.8657 | 0.86 | yes | no |
| Q9Z2M4 | DECR2_RAT | 1, ., 3, ., 1, ., 3, 4 | 0.4163 | 0.8590 | 0.8767 | yes | no |
| Q05528 | KDUD_DICD3 | 1, ., 1, ., 1, ., 1, 2, 7 | 0.3333 | 0.8154 | 0.9604 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.3.1.34 | 0.979 |
| 3rd Layer | 1.3.1 | 0.983 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | GSVIVG00030139001 | SubName- Full=Putative uncharacterized protein (Chromosome chr1 scaffold_5, whole genome shotgun sequence); (297 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 298 | |||
| cd05369 | 249 | cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta | 1e-110 | |
| PRK07576 | 264 | PRK07576, PRK07576, short chain dehydrogenase; Pro | 2e-75 | |
| PRK07677 | 252 | PRK07677, PRK07677, short chain dehydrogenase; Pro | 9e-68 | |
| cd05233 | 234 | cd05233, SDR_c, classical (c) SDRs | 5e-57 | |
| PRK05653 | 246 | PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) | 5e-55 | |
| PRK05557 | 248 | PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) | 2e-54 | |
| PRK08213 | 259 | PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro | 9e-54 | |
| cd05358 | 253 | cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc | 6e-52 | |
| cd05347 | 248 | cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena | 3e-50 | |
| PRK12826 | 251 | PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote | 6e-50 | |
| COG1028 | 251 | COG1028, FabG, Dehydrogenases with different speci | 6e-50 | |
| PRK07231 | 251 | PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) | 3e-49 | |
| cd05333 | 240 | cd05333, BKR_SDR_c, beta-Keto acyl carrier protein | 5e-48 | |
| PRK05565 | 247 | PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) | 4e-46 | |
| TIGR01830 | 239 | TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier | 7e-45 | |
| PRK12825 | 249 | PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) | 2e-43 | |
| cd05362 | 243 | cd05362, THN_reductase-like_SDR_c, tetrahydroxynap | 1e-42 | |
| PRK08936 | 261 | PRK08936, PRK08936, glucose-1-dehydrogenase; Provi | 4e-42 | |
| cd05352 | 252 | cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M | 4e-42 | |
| PRK12939 | 250 | PRK12939, PRK12939, short chain dehydrogenase; Pro | 4e-41 | |
| cd05359 | 242 | cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c | 1e-40 | |
| PRK07097 | 265 | PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro | 8e-39 | |
| PRK06114 | 254 | PRK06114, PRK06114, short chain dehydrogenase; Pro | 9e-39 | |
| PRK06841 | 255 | PRK06841, PRK06841, short chain dehydrogenase; Pro | 3e-38 | |
| TIGR01832 | 248 | TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena | 4e-38 | |
| cd05364 | 253 | cd05364, SDR_c11, classical (c) SDR, subgroup 11 | 1e-37 | |
| PRK06463 | 255 | PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) | 2e-37 | |
| cd05345 | 248 | cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl | 6e-37 | |
| PRK06138 | 252 | PRK06138, PRK06138, short chain dehydrogenase; Pro | 6e-37 | |
| PRK12429 | 258 | PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas | 1e-36 | |
| PRK06113 | 255 | PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro | 2e-36 | |
| PRK08277 | 278 | PRK08277, PRK08277, D-mannonate oxidoreductase; Pr | 2e-36 | |
| PRK12829 | 264 | PRK12829, PRK12829, short chain dehydrogenase; Pro | 2e-36 | |
| PRK08063 | 250 | PRK08063, PRK08063, enoyl-(acyl carrier protein) r | 3e-36 | |
| PRK07067 | 257 | PRK07067, PRK07067, sorbitol dehydrogenase; Provis | 3e-36 | |
| cd05341 | 247 | cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta | 3e-36 | |
| cd05344 | 253 | cd05344, BKR_like_SDR_like, putative beta-ketoacyl | 4e-36 | |
| PRK06124 | 256 | PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro | 6e-36 | |
| cd08935 | 271 | cd08935, mannonate_red_SDR_c, putative D-mannonate | 1e-35 | |
| cd05355 | 270 | cd05355, SDR_c1, classical (c) SDR, subgroup 1 | 2e-35 | |
| cd05329 | 251 | cd05329, TR_SDR_c, tropinone reductase-I and II (T | 2e-35 | |
| cd05365 | 242 | cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi | 5e-35 | |
| PRK12935 | 247 | PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro | 5e-35 | |
| TIGR01963 | 255 | TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase | 1e-34 | |
| PRK06935 | 258 | PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog | 1e-34 | |
| cd05349 | 246 | cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl | 3e-34 | |
| cd05366 | 257 | cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol | 5e-34 | |
| PRK07856 | 252 | PRK07856, PRK07856, short chain dehydrogenase; Pro | 1e-33 | |
| cd08930 | 250 | cd08930, SDR_c8, classical (c) SDR, subgroup 8 | 1e-33 | |
| PRK06701 | 290 | PRK06701, PRK06701, short chain dehydrogenase; Pro | 2e-33 | |
| PRK09242 | 257 | PRK09242, PRK09242, tropinone reductase; Provision | 3e-33 | |
| PRK07814 | 263 | PRK07814, PRK07814, short chain dehydrogenase; Pro | 6e-33 | |
| PRK08217 | 253 | PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) | 7e-33 | |
| cd05323 | 244 | cd05323, ADH_SDR_c_like, insect type alcohol dehyd | 1e-32 | |
| PRK07035 | 252 | PRK07035, PRK07035, short chain dehydrogenase; Pro | 1e-32 | |
| PRK07478 | 254 | PRK07478, PRK07478, short chain dehydrogenase; Pro | 7e-32 | |
| PRK08993 | 253 | PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog | 1e-31 | |
| PRK12827 | 249 | PRK12827, PRK12827, short chain dehydrogenase; Pro | 2e-31 | |
| PRK07326 | 237 | PRK07326, PRK07326, short chain dehydrogenase; Pro | 3e-31 | |
| PRK06500 | 249 | PRK06500, PRK06500, short chain dehydrogenase; Pro | 4e-31 | |
| PRK08324 | 681 | PRK08324, PRK08324, short chain dehydrogenase; Val | 1e-30 | |
| PRK06484 | 520 | PRK06484, PRK06484, short chain dehydrogenase; Val | 3e-30 | |
| cd08944 | 246 | cd08944, SDR_c12, classical (c) SDR, subgroup 12 | 3e-30 | |
| cd05326 | 249 | cd05326, secoisolariciresinol-DH_like_SDR_c, secoi | 5e-30 | |
| PRK07063 | 260 | PRK07063, PRK07063, short chain dehydrogenase; Pro | 1e-29 | |
| PRK07774 | 250 | PRK07774, PRK07774, short chain dehydrogenase; Pro | 2e-29 | |
| TIGR03971 | 265 | TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil | 3e-29 | |
| PRK08643 | 256 | PRK08643, PRK08643, acetoin reductase; Validated | 5e-29 | |
| PRK12828 | 239 | PRK12828, PRK12828, short chain dehydrogenase; Pro | 6e-29 | |
| PRK07890 | 258 | PRK07890, PRK07890, short chain dehydrogenase; Pro | 4e-28 | |
| PRK12937 | 245 | PRK12937, PRK12937, short chain dehydrogenase; Pro | 6e-28 | |
| cd05374 | 248 | cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster | 8e-28 | |
| PRK06484 | 520 | PRK06484, PRK06484, short chain dehydrogenase; Val | 1e-27 | |
| PRK08085 | 254 | PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro | 1e-27 | |
| cd05363 | 254 | cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), | 1e-27 | |
| PRK07523 | 255 | PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro | 1e-27 | |
| cd08943 | 250 | cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al | 2e-27 | |
| TIGR02415 | 254 | TIGR02415, 23BDH, acetoin reductases | 5e-27 | |
| cd08940 | 258 | cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge | 6e-27 | |
| cd08933 | 261 | cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl | 7e-27 | |
| PRK12743 | 256 | PRK12743, PRK12743, oxidoreductase; Provisional | 9e-27 | |
| cd05338 | 246 | cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena | 9e-27 | |
| cd08942 | 250 | cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy | 1e-26 | |
| PRK12823 | 260 | PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1 | 2e-26 | |
| PRK12481 | 251 | PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog | 3e-26 | |
| PRK06198 | 260 | PRK06198, PRK06198, short chain dehydrogenase; Pro | 4e-26 | |
| PRK07060 | 245 | PRK07060, PRK07060, short chain dehydrogenase; Pro | 4e-26 | |
| PRK09135 | 249 | PRK09135, PRK09135, pteridine reductase; Provision | 4e-26 | |
| cd08936 | 256 | cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re | 4e-26 | |
| pfam13561 | 239 | pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote | 1e-25 | |
| cd05332 | 257 | cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste | 1e-25 | |
| PRK06172 | 253 | PRK06172, PRK06172, short chain dehydrogenase; Pro | 2e-25 | |
| PRK07831 | 262 | PRK07831, PRK07831, short chain dehydrogenase; Pro | 4e-25 | |
| PLN02253 | 280 | PLN02253, PLN02253, xanthoxin dehydrogenase | 4e-25 | |
| PRK06057 | 255 | PRK06057, PRK06057, short chain dehydrogenase; Pro | 5e-25 | |
| PRK13394 | 262 | PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas | 7e-25 | |
| cd05330 | 257 | cd05330, cyclohexanol_reductase_SDR_c, cyclohexano | 1e-24 | |
| cd05351 | 244 | cd05351, XR_like_SDR_c, xylulose reductase-like, c | 1e-24 | |
| cd05357 | 234 | cd05357, PR_SDR_c, pteridine reductase (PR), class | 1e-24 | |
| PRK06123 | 248 | PRK06123, PRK06123, short chain dehydrogenase; Pro | 2e-24 | |
| PRK08642 | 253 | PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) | 3e-24 | |
| cd08934 | 243 | cd08934, CAD_SDR_c, clavulanic acid dehydrogenase | 4e-24 | |
| PRK08278 | 273 | PRK08278, PRK08278, short chain dehydrogenase; Pro | 9e-24 | |
| PRK06949 | 258 | PRK06949, PRK06949, short chain dehydrogenase; Pro | 9e-24 | |
| PRK12745 | 256 | PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote | 1e-23 | |
| PRK08628 | 258 | PRK08628, PRK08628, short chain dehydrogenase; Pro | 2e-23 | |
| cd05372 | 250 | cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) | 4e-23 | |
| PRK07109 | 334 | PRK07109, PRK07109, short chain dehydrogenase; Pro | 4e-23 | |
| PRK06200 | 263 | PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny | 4e-23 | |
| PRK06398 | 258 | PRK06398, PRK06398, aldose dehydrogenase; Validate | 5e-23 | |
| PRK08226 | 263 | PRK08226, PRK08226, short chain dehydrogenase; Pro | 7e-23 | |
| cd08937 | 256 | cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa | 8e-23 | |
| cd05348 | 257 | cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro | 1e-22 | |
| cd09761 | 242 | cd09761, A3DFK9-like_SDR_c, Clostridium thermocell | 1e-22 | |
| cd05324 | 225 | cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu | 1e-22 | |
| PRK05875 | 276 | PRK05875, PRK05875, short chain dehydrogenase; Pro | 2e-22 | |
| PRK07069 | 251 | PRK07069, PRK07069, short chain dehydrogenase; Val | 3e-22 | |
| cd05368 | 241 | cd05368, DHRS6_like_SDR_c, human DHRS6-like, class | 3e-22 | |
| PRK07062 | 265 | PRK07062, PRK07062, short chain dehydrogenase; Pro | 3e-22 | |
| TIGR01829 | 242 | TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta | 4e-22 | |
| PRK05867 | 253 | PRK05867, PRK05867, short chain dehydrogenase; Pro | 5e-22 | |
| PRK12746 | 254 | PRK12746, PRK12746, short chain dehydrogenase; Pro | 1e-21 | |
| PRK06181 | 263 | PRK06181, PRK06181, short chain dehydrogenase; Pro | 1e-21 | |
| PRK07666 | 239 | PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) | 2e-21 | |
| COG0300 | 265 | COG0300, DltE, Short-chain dehydrogenases of vario | 3e-21 | |
| TIGR02632 | 676 | TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate | 5e-21 | |
| cd05371 | 252 | cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr | 6e-21 | |
| PRK12824 | 245 | PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro | 6e-21 | |
| cd08939 | 239 | cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine | 7e-21 | |
| PRK08589 | 272 | PRK08589, PRK08589, short chain dehydrogenase; Val | 8e-21 | |
| COG4221 | 246 | COG4221, COG4221, Short-chain alcohol dehydrogenas | 1e-20 | |
| PRK09730 | 247 | PRK09730, PRK09730, putative NAD(P)-binding oxidor | 1e-20 | |
| PRK06077 | 252 | PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) | 2e-20 | |
| PRK06171 | 266 | PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro | 3e-20 | |
| TIGR03206 | 250 | TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy | 5e-20 | |
| cd08929 | 226 | cd08929, SDR_c4, classical (c) SDR, subgroup 4 | 5e-20 | |
| PRK08265 | 261 | PRK08265, PRK08265, short chain dehydrogenase; Pro | 7e-20 | |
| COG0623 | 259 | COG0623, FabI, Enoyl-[acyl-carrier-protein] | 9e-20 | |
| PRK06128 | 300 | PRK06128, PRK06128, oxidoreductase; Provisional | 1e-19 | |
| pfam00106 | 167 | pfam00106, adh_short, short chain dehydrogenase | 1e-19 | |
| cd08945 | 258 | cd08945, PKR_SDR_c, Polyketide ketoreductase, clas | 1e-19 | |
| PRK08416 | 260 | PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro | 2e-19 | |
| TIGR04316 | 250 | TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben | 2e-19 | |
| PRK12747 | 252 | PRK12747, PRK12747, short chain dehydrogenase; Pro | 3e-19 | |
| PRK09186 | 256 | PRK09186, PRK09186, flagellin modification protein | 6e-19 | |
| PRK07985 | 294 | PRK07985, PRK07985, oxidoreductase; Provisional | 1e-18 | |
| PRK06947 | 248 | PRK06947, PRK06947, glucose-1-dehydrogenase; Provi | 2e-18 | |
| cd05360 | 233 | cd05360, SDR_c3, classical (c) SDR, subgroup 3 | 2e-18 | |
| TIGR03325 | 262 | TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3- | 5e-18 | |
| PRK12384 | 259 | PRK12384, PRK12384, sorbitol-6-phosphate dehydroge | 6e-18 | |
| cd09762 | 243 | cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro | 1e-17 | |
| cd05340 | 236 | cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li | 2e-17 | |
| cd05337 | 255 | cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl | 4e-17 | |
| PRK08220 | 252 | PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy | 5e-17 | |
| cd05353 | 250 | cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)- | 6e-17 | |
| PRK12936 | 245 | PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote | 7e-17 | |
| cd05370 | 228 | cd05370, SDR_c2, classical (c) SDR, subgroup 2 | 8e-17 | |
| PRK06523 | 260 | PRK06523, PRK06523, short chain dehydrogenase; Pro | 1e-16 | |
| PRK07792 | 306 | PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) | 3e-16 | |
| cd09763 | 265 | cd09763, DHRS1-like_SDR_c, human dehydrogenase/red | 4e-16 | |
| PRK05786 | 238 | PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) | 1e-15 | |
| PRK12744 | 257 | PRK12744, PRK12744, short chain dehydrogenase; Pro | 1e-15 | |
| cd05343 | 250 | cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c | 1e-15 | |
| cd08932 | 223 | cd08932, HetN_like_SDR_c, HetN oxidoreductase-like | 1e-15 | |
| PRK05872 | 296 | PRK05872, PRK05872, short chain dehydrogenase; Pro | 4e-15 | |
| PRK07074 | 257 | PRK07074, PRK07074, short chain dehydrogenase; Pro | 6e-15 | |
| PRK08267 | 260 | PRK08267, PRK08267, short chain dehydrogenase; Pro | 8e-15 | |
| cd05322 | 257 | cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy | 9e-15 | |
| PRK06550 | 235 | PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) | 3e-14 | |
| PRK07791 | 286 | PRK07791, PRK07791, short chain dehydrogenase; Pro | 3e-14 | |
| PRK05650 | 270 | PRK05650, PRK05650, short chain dehydrogenase; Pro | 4e-14 | |
| PRK07370 | 258 | PRK07370, PRK07370, enoyl-(acyl carrier protein) r | 4e-14 | |
| cd05350 | 239 | cd05350, SDR_c6, classical (c) SDR, subgroup 6 | 5e-14 | |
| cd05327 | 269 | cd05327, retinol-DH_like_SDR_c_like, retinol dehyd | 6e-14 | |
| TIGR02685 | 267 | TIGR02685, pter_reduc_Leis, pteridine reductase | 6e-14 | |
| PRK08945 | 247 | PRK08945, PRK08945, putative oxoacyl-(acyl carrier | 9e-14 | |
| PRK06125 | 259 | PRK06125, PRK06125, short chain dehydrogenase; Pro | 1e-13 | |
| cd05339 | 243 | cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy | 2e-13 | |
| cd05334 | 221 | cd05334, DHPR_SDR_c_like, dihydropteridine reducta | 5e-13 | |
| TIGR01831 | 239 | TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote | 6e-13 | |
| PRK05717 | 255 | PRK05717, PRK05717, oxidoreductase; Validated | 7e-13 | |
| PRK07533 | 258 | PRK07533, PRK07533, enoyl-(acyl carrier protein) r | 9e-13 | |
| cd05331 | 244 | cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz | 1e-12 | |
| cd05373 | 238 | cd05373, SDR_c10, classical (c) SDR, subgroup 10 | 2e-12 | |
| PRK06179 | 270 | PRK06179, PRK06179, short chain dehydrogenase; Pro | 4e-12 | |
| PRK08339 | 263 | PRK08339, PRK08339, short chain dehydrogenase; Pro | 7e-12 | |
| cd05325 | 233 | cd05325, carb_red_sniffer_like_SDR_c, carbonyl red | 9e-12 | |
| PRK12748 | 256 | PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote | 1e-11 | |
| PRK12859 | 256 | PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote | 1e-11 | |
| PRK09134 | 258 | PRK09134, PRK09134, short chain dehydrogenase; Pro | 2e-11 | |
| PRK07454 | 241 | PRK07454, PRK07454, short chain dehydrogenase; Pro | 2e-11 | |
| cd05346 | 249 | cd05346, SDR_c5, classical (c) SDR, subgroup 5 | 4e-11 | |
| PRK08703 | 239 | PRK08703, PRK08703, short chain dehydrogenase; Pro | 4e-11 | |
| PRK07041 | 230 | PRK07041, PRK07041, short chain dehydrogenase; Pro | 7e-11 | |
| PRK06182 | 273 | PRK06182, PRK06182, short chain dehydrogenase; Val | 9e-11 | |
| PRK06940 | 275 | PRK06940, PRK06940, short chain dehydrogenase; Pro | 1e-10 | |
| cd05356 | 239 | cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst | 1e-10 | |
| PRK05866 | 293 | PRK05866, PRK05866, short chain dehydrogenase; Pro | 3e-10 | |
| cd08931 | 227 | cd08931, SDR_c9, classical (c) SDR, subgroup 9 | 3e-10 | |
| PRK07577 | 234 | PRK07577, PRK07577, short chain dehydrogenase; Pro | 3e-10 | |
| PRK08263 | 275 | PRK08263, PRK08263, short chain dehydrogenase; Pro | 3e-10 | |
| PRK07825 | 273 | PRK07825, PRK07825, short chain dehydrogenase; Pro | 4e-10 | |
| PRK07201 | 657 | PRK07201, PRK07201, short chain dehydrogenase; Pro | 4e-10 | |
| PRK09072 | 263 | PRK09072, PRK09072, short chain dehydrogenase; Pro | 4e-10 | |
| PRK06194 | 287 | PRK06194, PRK06194, hypothetical protein; Provisio | 5e-10 | |
| PLN02730 | 303 | PLN02730, PLN02730, enoyl-[acyl-carrier-protein] r | 7e-10 | |
| cd05367 | 241 | cd05367, SPR-like_SDR_c, sepiapterin reductase (SP | 8e-10 | |
| cd11731 | 198 | cd11731, Lin1944_like_SDR_c, Lin1944 and related p | 2e-09 | |
| PRK05876 | 275 | PRK05876, PRK05876, short chain dehydrogenase; Pro | 2e-09 | |
| PRK12938 | 246 | PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro | 2e-09 | |
| cd09806 | 258 | cd09806, type1_17beta-HSD-like_SDR_c, human estrog | 3e-09 | |
| PRK06914 | 280 | PRK06914, PRK06914, short chain dehydrogenase; Pro | 4e-09 | |
| PRK08264 | 238 | PRK08264, PRK08264, short chain dehydrogenase; Val | 4e-09 | |
| PRK12742 | 237 | PRK12742, PRK12742, oxidoreductase; Provisional | 5e-09 | |
| PRK06300 | 299 | PRK06300, PRK06300, enoyl-(acyl carrier protein) r | 5e-09 | |
| PRK06180 | 277 | PRK06180, PRK06180, short chain dehydrogenase; Pro | 6e-09 | |
| COG3967 | 245 | COG3967, DltE, Short-chain dehydrogenase involved | 6e-09 | |
| cd05328 | 250 | cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de | 8e-09 | |
| PRK07775 | 274 | PRK07775, PRK07775, short chain dehydrogenase; Pro | 9e-09 | |
| cd02266 | 186 | cd02266, SDR, Short-chain dehydrogenases/reductase | 2e-08 | |
| PRK08415 | 274 | PRK08415, PRK08415, enoyl-(acyl carrier protein) r | 2e-08 | |
| PRK06720 | 169 | PRK06720, PRK06720, hypothetical protein; Provisio | 2e-08 | |
| PRK07806 | 248 | PRK07806, PRK07806, short chain dehydrogenase; Pro | 4e-08 | |
| PRK06196 | 315 | PRK06196, PRK06196, oxidoreductase; Provisional | 4e-08 | |
| cd05354 | 235 | cd05354, SDR_c7, classical (c) SDR, subgroup 7 | 6e-08 | |
| PRK10538 | 248 | PRK10538, PRK10538, malonic semialdehyde reductase | 3e-07 | |
| smart00822 | 180 | smart00822, PKS_KR, This enzymatic domain is part | 3e-07 | |
| PRK08219 | 227 | PRK08219, PRK08219, short chain dehydrogenase; Pro | 3e-07 | |
| PRK05855 | 582 | PRK05855, PRK05855, short chain dehydrogenase; Val | 7e-07 | |
| PRK06505 | 271 | PRK06505, PRK06505, enoyl-(acyl carrier protein) r | 8e-07 | |
| cd08953 | 436 | cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup | 3e-06 | |
| PRK08159 | 272 | PRK08159, PRK08159, enoyl-(acyl carrier protein) r | 3e-06 | |
| PRK08594 | 257 | PRK08594, PRK08594, enoyl-(acyl carrier protein) r | 4e-06 | |
| PRK06139 | 330 | PRK06139, PRK06139, short chain dehydrogenase; Pro | 4e-06 | |
| pfam08659 | 181 | pfam08659, KR, KR domain | 5e-06 | |
| PRK06483 | 236 | PRK06483, PRK06483, dihydromonapterin reductase; P | 1e-05 | |
| PRK12428 | 241 | PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydro | 1e-05 | |
| PRK08251 | 248 | PRK08251, PRK08251, short chain dehydrogenase; Pro | 1e-05 | |
| PRK07832 | 272 | PRK07832, PRK07832, short chain dehydrogenase; Pro | 1e-05 | |
| PRK07024 | 257 | PRK07024, PRK07024, short chain dehydrogenase; Pro | 2e-05 | |
| cd09807 | 274 | cd09807, retinol-DH_like_SDR_c, retinol dehydrogen | 2e-05 | |
| PRK07889 | 256 | PRK07889, PRK07889, enoyl-(acyl carrier protein) r | 5e-05 | |
| cd05361 | 242 | cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de | 6e-05 | |
| cd09809 | 284 | cd09809, human_WWOX_like_SDR_c-like, human WWOX (W | 8e-05 | |
| PRK05993 | 277 | PRK05993, PRK05993, short chain dehydrogenase; Pro | 9e-05 | |
| PRK05693 | 274 | PRK05693, PRK05693, short chain dehydrogenase; Pro | 1e-04 | |
| PRK08690 | 261 | PRK08690, PRK08690, enoyl-(acyl carrier protein) r | 1e-04 | |
| PRK08340 | 259 | PRK08340, PRK08340, glucose-1-dehydrogenase; Provi | 1e-04 | |
| PRK06482 | 276 | PRK06482, PRK06482, short chain dehydrogenase; Pro | 1e-04 | |
| TIGR01500 | 256 | TIGR01500, sepiapter_red, sepiapterin reductase | 2e-04 | |
| PRK08303 | 305 | PRK08303, PRK08303, short chain dehydrogenase; Pro | 2e-04 | |
| PRK06079 | 252 | PRK06079, PRK06079, enoyl-(acyl carrier protein) r | 4e-04 | |
| PRK06603 | 260 | PRK06603, PRK06603, enoyl-(acyl carrier protein) r | 8e-04 | |
| cd09805 | 281 | cd09805, type2_17beta_HSD-like_SDR_c, human 17beta | 0.001 | |
| PRK09291 | 257 | PRK09291, PRK09291, short chain dehydrogenase; Pro | 0.003 | |
| cd11730 | 206 | cd11730, Tthb094_like_SDR_c, Tthb094 and related p | 0.004 |
| >gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR | Back alignment and domain information |
|---|
Score = 320 bits (822), Expect = e-110
Identities = 127/257 (49%), Positives = 162/257 (63%), Gaps = 10/257 (3%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEG 68
LKGKVA +TGGG+GIG I+ + GA++AI GR+ VL +A + S G A ++
Sbjct: 1 LKGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGRAHPIQC 60
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DVR E V+ T+ FGK+DIL+N AAGNFL PAE LSPNGF+TVI+ID GTF
Sbjct: 61 DVRDPEAVEAAVDETLKEFGKIDILINNAAGNFLAPAESLSPNGFKTVIDIDLNGTFNTT 120
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
K L + GG I+NISAT YT + +Q+H +AAKA VD++TRSLA+EWG
Sbjct: 121 KAVGKRLIEAKH-------GGSILNISATYAYTGSPFQVHSAAAKAGVDALTRSLAVEWG 173
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEE-IRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
Y IRVN IAPGPI T G+ +LAP K + + + G +IA AL+L SDA
Sbjct: 174 -PYGIRVNAIAPGPIPTTEGMERLAPSGKSEKKMIERVPLGRLGTPEEIANLALFLLSDA 232
Query: 248 GKYVNGNTLIVDGGNWL 264
Y+NG TL+VDGG WL
Sbjct: 233 ASYINGTTLVVDGGQWL 249
|
TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249 |
| >gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 230 bits (590), Expect = 2e-75
Identities = 105/262 (40%), Positives = 143/262 (54%), Gaps = 14/262 (5%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
M + F GK ++ GG SGI I+ + GA +A+ R + + +AVA L G
Sbjct: 1 MTTMFD---FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAG 57
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
+G+ DVR + FG +D+LV+ AAGNF PA +S NGF+TV++ID
Sbjct: 58 PEGLGVSADVRDYAAVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDID 117
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
+GTF + A L++ G II ISA + Q HV AAKA VD +T
Sbjct: 118 LLGTFNVLKAAYPLLRR---------PGASIIQISAPQAFVPMPMQAHVCAAKAGVDMLT 168
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDIAMA 239
R+LALEWG + IRVN I PGPI T G+++LAP E+++ + + G K DIA A
Sbjct: 169 RTLALEWGPE-GIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANA 227
Query: 240 ALYLASDAGKYVNGNTLIVDGG 261
AL+LASD Y+ G L VDGG
Sbjct: 228 ALFLASDMASYITGVVLPVDGG 249
|
Length = 264 |
| >gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 211 bits (539), Expect = 9e-68
Identities = 104/255 (40%), Positives = 144/255 (56%), Gaps = 10/255 (3%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
KV ++TGG SG+G ++ + + GA + I GR K L A + + ++ DVR
Sbjct: 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVR 60
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
ED ++VE FG++D L+N AAGNF+ PAEDLS NG+ +VI+I GTF
Sbjct: 61 NPEDVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAV 120
Query: 132 LKY-LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTD 190
KY ++KG +G IIN+ AT + A IH +AAKA V ++TR+LA+EWG
Sbjct: 121 GKYWIEKGIKGN--------IINMVATYAWDAGPGVIHSAAAKAGVLAMTRTLAVEWGRK 172
Query: 191 YAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK 249
Y IRVN IAPGPI+ T G KL EE + + + G +IA A +L SD
Sbjct: 173 YGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFLLSDEAA 232
Query: 250 YVNGNTLIVDGGNWL 264
Y+NG + +DGG WL
Sbjct: 233 YINGTCITMDGGQWL 247
|
Length = 252 |
| >gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 183 bits (466), Expect = 5e-57
Identities = 89/245 (36%), Positives = 136/245 (55%), Gaps = 11/245 (4%)
Query: 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRE 74
AL+TG SGIG I+ +L + GA + + R + L +AA+ +LG A+ ++ DV E
Sbjct: 1 ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALA-ELAAIEALGGNAVAVQADVSDEE 59
Query: 75 DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 134
D +VE + FG+LDILVN A P E+L+ + V++++ G F++ AL +
Sbjct: 60 DVEALVEEALEEFGRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVFLLTRAALPH 119
Query: 135 LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIR 194
+KK G GG I+NIS+ Q +A+KAA++ +TRSLALE Y IR
Sbjct: 120 MKKQG--------GGRIVNISSVAGLRPLPGQAAYAASKAALEGLTRSLALELA-PYGIR 170
Query: 195 VNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGN 254
VN +APG + DT ++KL PEE + + + G ++A A ++LASD Y+ G
Sbjct: 171 VNAVAPGLV-DTPMLAKLGPEEAEKELAAAIPLGRLGTPEEVAEAVVFLASDEASYITGQ 229
Query: 255 TLIVD 259
+ VD
Sbjct: 230 VIPVD 234
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234 |
| >gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 178 bits (454), Expect = 5e-55
Identities = 86/253 (33%), Positives = 126/253 (49%), Gaps = 11/253 (4%)
Query: 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEG 68
L+GK AL+TG GIG I+L+L GA + I + + A L + G A L
Sbjct: 2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVF 61
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV ++E+ + FG LDILVN A +S + VI+++ GTF +
Sbjct: 62 DVSDEAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVV 121
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
AL + K G+ I+NIS+ T Q + SAAKA V T++LALE
Sbjct: 122 RAALPPMIKARYGR--------IVNISSVSGVTGNPGQTNYSAAKAGVIGFTKALALELA 173
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
+ I VN +APG I DT L PEE++++ + + G+ ++A A +LASDA
Sbjct: 174 S-RGITVNAVAPGFI-DTDMTEGL-PEEVKAEILKEIPLGRLGQPEEVANAVAFLASDAA 230
Query: 249 KYVNGNTLIVDGG 261
Y+ G + V+GG
Sbjct: 231 SYITGQVIPVNGG 243
|
Length = 246 |
| >gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 176 bits (449), Expect = 2e-54
Identities = 82/253 (32%), Positives = 122/253 (48%), Gaps = 12/253 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEG 68
L+GKVAL+TG GIG I+ +L GA + I + + VA + +LG A+ ++G
Sbjct: 3 LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQG 62
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV E R V+ FG +DILVN A + + VI+ + G F +
Sbjct: 63 DVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLT 122
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
+ + K G IINIS+ + Q + +A+KA V T+SLA E
Sbjct: 123 KAVARPMMKQR--------SGRIINISSVVGLMGNPGQANYAASKAGVIGFTKSLARELA 174
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
+ I VN +APG I +T L PE+++ + + G+ +IA A +LASD
Sbjct: 175 S-RGITVNAVAPGFI-ETDMTDAL-PEDVKEAILAQIPLGRLGQPEEIASAVAFLASDEA 231
Query: 249 KYVNGNTLIVDGG 261
Y+ G TL V+GG
Sbjct: 232 AYITGQTLHVNGG 244
|
Length = 248 |
| >gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 175 bits (446), Expect = 9e-54
Identities = 93/258 (36%), Positives = 131/258 (50%), Gaps = 18/258 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GK AL+TGG G+G +I+ LG+ GA + + R+ L A A L +LGI A+ + D
Sbjct: 10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAAD 69
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V D R+ E T+ FG +DILVN A + PAED + V+ ++ G F++
Sbjct: 70 VADEADIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQ 129
Query: 130 EALKYLKKGGRGQASSSSGGIIINIS--ATL--HYTATWYQIHVSAAKAAVDSITRSLAL 185
K G IIN++ A L + I + +K AV + TR+LA
Sbjct: 130 AVAKRSMIPRG-------YGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAA 182
Query: 186 EWGTDYAIRVNGIAPG--PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
EWG + IRVN IAPG P K T G + E++ + + G+ D+ AAL L
Sbjct: 183 EWG-PHGIRVNAIAPGFFPTKMTRGTLERLGEDLLAHT----PLGRLGDDEDLKGAALLL 237
Query: 244 ASDAGKYVNGNTLIVDGG 261
ASDA K++ G L VDGG
Sbjct: 238 ASDASKHITGQILAVDGG 255
|
Length = 259 |
| >gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 170 bits (433), Expect = 6e-52
Identities = 90/253 (35%), Positives = 131/253 (51%), Gaps = 9/253 (3%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPAIGLEG 68
LKGKVAL+TG SGIG I+++L GA + + R ++ V + ++G AI ++
Sbjct: 1 LKGKVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAVGGKAIAVQA 60
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV K ED V + +S I FG LDILVN A + +++ + VI+++ G F+
Sbjct: 61 DVSKEEDVVALFQSAIKEFGTLDILVNNAGLQGDASSHEMTLEDWNKVIDVNLTGQFLCA 120
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
EA+K +K S G IIN+S+ ++ +A+K V +T++LA E+
Sbjct: 121 REAIKRFRK-------SKIKGKIINMSSVHEKIPWPGHVNYAASKGGVKMMTKTLAQEYA 173
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
IRVN IAPG I E R+ + + GE +IA AA +LASD
Sbjct: 174 -PKGIRVNAIAPGAINTPINAEAWDDPEQRADLLSLIPMGRIGEPEEIAAAAAWLASDEA 232
Query: 249 KYVNGNTLIVDGG 261
YV G TL VDGG
Sbjct: 233 SYVTGTTLFVDGG 245
|
GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253 |
| >gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 165 bits (421), Expect = 3e-50
Identities = 92/258 (35%), Positives = 129/258 (50%), Gaps = 14/258 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LKGKVAL+TG GIGF I+ L + GA I I R + A + G+ A D
Sbjct: 3 LKGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGVEATAFTCD 62
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V E VE+ FGK+DILVN A PAE+ +R VI+++ G F +
Sbjct: 63 VSDEEAIKAAVEAIEEDFGKIDILVNNAGIIRRHPAEEFPEAEWRDVIDVNLNGVFFVSQ 122
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+++ K G G+ IINI + L +A+K V +T++LA EW
Sbjct: 123 AVARHMIKQGHGK--------IINICSLLSELGGPPVPAYAASKGGVAGLTKALATEWA- 173
Query: 190 DYAIRVNGIAPGPI--KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
+ I+VN IAPG + T V +A E + A ++G+ D+ AA++LASDA
Sbjct: 174 RHGIQVNAIAPGYFATEMTEAV--VADPEFNDDILKRIPAGRWGQPEDLVGAAVFLASDA 231
Query: 248 GKYVNGNTLIVDGGNWLS 265
YVNG + VDGG WL+
Sbjct: 232 SDYVNGQIIFVDGG-WLA 248
|
Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248 |
| >gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Score = 165 bits (420), Expect = 6e-50
Identities = 81/254 (31%), Positives = 119/254 (46%), Gaps = 11/254 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+G+VAL+TG GIG I+++L GA + ++ + + + G A + D
Sbjct: 4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVD 63
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
VR R V + + FG+LDILV A L P ++ + VI+++ GTF++
Sbjct: 64 VRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQ 123
Query: 130 EALKYLKKGGRGQASSSSGGIIINI-SATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
AL L + G GG I+ S H +A+KA + TR+LALE
Sbjct: 124 AALPALIRAG--------GGRIVLTSSVAGPRVGYPGLAHYAASKAGLVGFTRALALELA 175
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
I VN + PG + DT L + + + GE DIA A L+LASD
Sbjct: 176 A-RNITVNSVHPGGV-DTPMAGNLGDAQWAEAIAAAIPLGRLGEPEDIAAAVLFLASDEA 233
Query: 249 KYVNGNTLIVDGGN 262
+Y+ G TL VDGG
Sbjct: 234 RYITGQTLPVDGGA 247
|
Length = 251 |
| >gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 165 bits (419), Expect = 6e-50
Identities = 89/260 (34%), Positives = 131/260 (50%), Gaps = 21/260 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR--KTVLRSAVAALHSLGIP-AIGL 66
L GKVAL+TG SGIG I+ L + GA + + RR + + AA+ G A +
Sbjct: 3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAV 62
Query: 67 EGDVRKREDAVR-VVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGT 124
DV E++V +V + FG++DILV NA P E+L+ + VI+++ +G
Sbjct: 63 AADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGA 122
Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
F++ AL +KK I+NIS+ Q +A+KAA+ +T++LA
Sbjct: 123 FLLTRAALPLMKK-----------QRIVNISSVAGLGGPPGQAAYAASKAALIGLTKALA 171
Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKL--APEEIRSKATDYMAAYKFGEKWDIAMAALY 242
LE IRVN +APG I DT + L A E + + + G ++A A +
Sbjct: 172 LELA-PRGIRVNAVAPGYI-DTPMTAALESAELEALKRLAARIPLGRLGTPEEVAAAVAF 229
Query: 243 LASD-AGKYVNGNTLIVDGG 261
LASD A Y+ G TL VDGG
Sbjct: 230 LASDEAASYITGQTLPVDGG 249
|
Length = 251 |
| >gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 163 bits (415), Expect = 3e-49
Identities = 81/259 (31%), Positives = 124/259 (47%), Gaps = 21/259 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+GKVA++TG SGIG I+ + GA + + R + A + + G AI + D
Sbjct: 3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGG-RAIAVAAD 61
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLV-PAEDLSPNGFRTVIEIDSVGTFIMC 128
V D V + + FG +DILVN A P D+ F + ++ ++
Sbjct: 62 VSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWT 121
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISAT--LHYTA--TWYQIHVSAAKAAVDSITRSLA 184
A+ ++ G GG I+N+++T L WY +A+K AV ++T++LA
Sbjct: 122 QAAVPAMRGEG--------GGAIVNVASTAGLRPRPGLGWY----NASKGAVITLTKALA 169
Query: 185 LEWGTDYAIRVNGIAPGPIKD--TAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242
E G D IRVN +AP ++ E R+K + + G DIA AAL+
Sbjct: 170 AELGPD-KIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALF 228
Query: 243 LASDAGKYVNGNTLIVDGG 261
LASD ++ G TL+VDGG
Sbjct: 229 LASDEASWITGVTLVVDGG 247
|
Length = 251 |
| >gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 160 bits (406), Expect = 5e-48
Identities = 86/252 (34%), Positives = 124/252 (49%), Gaps = 17/252 (6%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
KVAL+TG GIG I+L+L GA +A+ R + V + +LG A LE DV
Sbjct: 1 KVALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNAAALEADVSD 60
Query: 73 REDAVRVVESTINHFGKLDILVNAA---AGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
RE +VE FG +DILVN A N L+ +S + VI ++ G F +
Sbjct: 61 REAVEALVEKVEAEFGPVDILVNNAGITRDNLLM---RMSEEDWDAVINVNLTGVFNVTQ 117
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
++ + K G+ IINIS+ + Q + +A+KA V T+SLA E +
Sbjct: 118 AVIRAMIKRRSGR--------IINISSVVGLIGNPGQANYAASKAGVIGFTKSLAKELAS 169
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK 249
I VN +APG I DT L PE+++ K + + G ++A A +LASD
Sbjct: 170 -RGITVNAVAPGFI-DTDMTDAL-PEKVKEKILKQIPLGRLGTPEEVANAVAFLASDDAS 226
Query: 250 YVNGNTLIVDGG 261
Y+ G L V+GG
Sbjct: 227 YITGQVLHVNGG 238
|
This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240 |
| >gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 155 bits (394), Expect = 4e-46
Identities = 83/253 (32%), Positives = 126/253 (49%), Gaps = 12/253 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEG 68
L GKVA++TG GIG I+ L K GA + I + + + + G AI ++
Sbjct: 3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKA 62
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV ED +VE + FGK+DILVN A + D++ + VI+++ G ++
Sbjct: 63 DVSSEEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLT 122
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
AL Y+ K G+I+NIS+ ++ SA+K AV++ T++LA E
Sbjct: 123 RYALPYMIKRK--------SGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAKELA 174
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
IRVN +APG I DT S + E+ A + + G+ +IA L+LASD
Sbjct: 175 P-SGIRVNAVAPGAI-DTEMWSSFSEEDKEGLAEEIPLG-RLGKPEEIAKVVLFLASDDA 231
Query: 249 KYVNGNTLIVDGG 261
Y+ G + VDGG
Sbjct: 232 SYITGQIITVDGG 244
|
Length = 247 |
| >gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Score = 151 bits (385), Expect = 7e-45
Identities = 88/253 (34%), Positives = 123/253 (48%), Gaps = 22/253 (8%)
Query: 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHSLGIPAIGLEGDVRKR 73
AL+TG GIG I+L+L K GA + I R V L + G+ A+G+ DV R
Sbjct: 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDR 60
Query: 74 EDAVRVVESTINHFGKLDILVNAA---AGNFLV--PAEDLSPNGFRTVIEIDSVGTFIMC 128
ED VVE G +DILVN A N L+ ED + VI+ + G F +
Sbjct: 61 EDVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEED-----WDAVIDTNLTGVFNLT 115
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
L+ + K G+ IINIS+ + Q + +A+KA V T+SLA E
Sbjct: 116 QAVLRIMIKQRSGR--------IINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKELA 167
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
+ I VN +APG I DT KL E+++ K + +FG ++A A +LASD
Sbjct: 168 S-RNITVNAVAPGFI-DTDMTDKL-SEKVKKKILSQIPLGRFGTPEEVANAVAFLASDEA 224
Query: 249 KYVNGNTLIVDGG 261
Y+ G + VDGG
Sbjct: 225 SYITGQVIHVDGG 237
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239 |
| >gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 148 bits (376), Expect = 2e-43
Identities = 79/253 (31%), Positives = 123/253 (48%), Gaps = 12/253 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPAIGLEG 68
L G+VAL+TG G+G I+L+L + GA + + R + V A+ +LG A ++
Sbjct: 4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQA 63
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV + V + + FG++DILVN A P D+S + + VI+++ G F +
Sbjct: 64 DVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLL 123
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
+ ++K GG I+NIS+ + + +AAKA + +T++LA E
Sbjct: 124 RAVVPPMRKQR--------GGRIVNISSVAGLPGWPGRSNYAAAKAGLVGLTKALARELA 175
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
+Y I VN +APG I DT E +K + G DIA A +L SDA
Sbjct: 176 -EYGITVNMVAPGDI-DTDMKEATIEEAREAK-DAETPLGRSGTPEDIARAVAFLCSDAS 232
Query: 249 KYVNGNTLIVDGG 261
Y+ G + V GG
Sbjct: 233 DYITGQVIEVTGG 245
|
Length = 249 |
| >gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 146 bits (371), Expect = 1e-42
Identities = 86/253 (33%), Positives = 122/253 (48%), Gaps = 13/253 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEG 68
L GKVAL+TG GIG I+ +L + GA++ + K VA + + G AI ++
Sbjct: 1 LAGKVALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEAAGGKAIAVQA 60
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV R+ ++ FG +DILVN A P + S F + +++ G F +
Sbjct: 61 DVSDPSQVARLFDAAEKAFGGVDILVNNAGVMLKKPIAETSEEEFDRMFTVNTKGAFFVL 120
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
EA K L+ GGR IINIS++L T + +KAAV++ TR LA E G
Sbjct: 121 QEAAKRLRDGGR----------IINISSSLTAAYTPNYGAYAGSKAAVEAFTRVLAKELG 170
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
I VN +APGP+ DT EE + GE DIA +LAS G
Sbjct: 171 -GRGITVNAVAPGPV-DTDMFYAGKTEEAVEGYAKMSPLGRLGEPEDIAPVVAFLASPDG 228
Query: 249 KYVNGNTLIVDGG 261
++VNG + +GG
Sbjct: 229 RWVNGQVIRANGG 241
|
1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243 |
| >gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 145 bits (368), Expect = 4e-42
Identities = 80/254 (31%), Positives = 126/254 (49%), Gaps = 11/254 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPAIGLEG 68
L+GKV ++TGG +G+G ++++ GK A + I R + + G AI ++G
Sbjct: 5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKG 64
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV D V ++++ + FG LD+++N A VP+ ++S + VI + G F+
Sbjct: 65 DVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGS 124
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-YQIHVSAAKAAVDSITRSLALEW 187
EA+KY + G IIN+S ++H W +H +A+K V +T +LA+E+
Sbjct: 125 REAIKYFVEHDI-------KGNIINMS-SVHEQIPWPLFVHYAASKGGVKLMTETLAMEY 176
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
IRVN I PG I K A + R+ + G+ +IA A +LAS
Sbjct: 177 APK-GIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVAAWLASSE 235
Query: 248 GKYVNGNTLIVDGG 261
YV G TL DGG
Sbjct: 236 ASYVTGITLFADGG 249
|
Length = 261 |
| >gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 145 bits (367), Expect = 4e-42
Identities = 86/256 (33%), Positives = 124/256 (48%), Gaps = 14/256 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEG 68
LKGKVA++TGG GIG I+ L + GA +AI+ A G+ +
Sbjct: 6 LKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTKAYKC 65
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV +E + + FGK+DIL+ A PA D + + VI+++ G F
Sbjct: 66 DVSSQESVEKTFKQIQKDFGKIDILIANAGITVHKPALDYTYEQWNKVIDVNLNGVFNCA 125
Query: 129 HEALKYLKKGGRGQ--ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
A K KK G+G ++S G I+N Q +A+KAAV + +SLA+E
Sbjct: 126 QAAAKIFKKQGKGSLIITASMSGTIVNRPQP--------QAAYNASKAAVIHLAKSLAVE 177
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
W Y IRVN I+PG I ++ +E+R K Y+ + ++ A LYLASD
Sbjct: 178 W-AKYFIRVNSISPGYID--TDLTDFVDKELRKKWESYIPLKRIALPEELVGAYLYLASD 234
Query: 247 AGKYVNGNTLIVDGGN 262
A Y G+ LI+DGG
Sbjct: 235 ASSYTTGSDLIIDGGY 250
|
NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252 |
| >gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 142 bits (361), Expect = 4e-41
Identities = 82/255 (32%), Positives = 115/255 (45%), Gaps = 16/255 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GK AL+TG G+G + L + GA +A R AAL + G A + D
Sbjct: 5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAAD 64
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ R ++ G LD LVN A A +L + + V+ ++ GTF+M
Sbjct: 65 LADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLR 124
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV---SAAKAAVDSITRSLALE 186
AL +L+ GRG+ I+N+++ TA W + A+K AV +TRSLA E
Sbjct: 125 AALPHLRDSGRGR--------IVNLASD---TALWGAPKLGAYVASKGAVIGMTRSLARE 173
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
G I VN IAPG A A E A + D+A A L+L SD
Sbjct: 174 LGGR-GITVNAIAPGLTATEATAYVPADERHAYYL-KGRALERLQVPDDVAGAVLFLLSD 231
Query: 247 AGKYVNGNTLIVDGG 261
A ++V G L V+GG
Sbjct: 232 AARFVTGQLLPVNGG 246
|
Length = 250 |
| >gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 141 bits (357), Expect = 1e-40
Identities = 77/250 (30%), Positives = 122/250 (48%), Gaps = 14/250 (5%)
Query: 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVRKR 73
AL+TGG GIG I+L+L + GA + I R+ K A + LG A+ + DV +
Sbjct: 1 ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIEELGGKAVVVRADVSQP 60
Query: 74 EDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALK 133
+D + + FG+LD+LV+ AA P +L+P + + + +A K
Sbjct: 61 QDVEEMFAAVKERFGRLDVLVSNAAAGAFRPLSELTPAHWDAKMNTNLKALVHCAQQAAK 120
Query: 134 YLKKGGRGQASSSSGGIIINISAT--LHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
+++ G GG I+ IS+ + + + AKAA++++ R LA+E G
Sbjct: 121 LMRERG--------GGRIVAISSLGSIRALPNYLAV--GTAKAALEALVRYLAVELG-PR 169
Query: 192 AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYV 251
IRVN ++PG I A E++ A A + G D+A A +L SDA + +
Sbjct: 170 GIRVNAVSPGVIDTDALAHFPNREDLLEAAAANTPAGRVGTPQDVADAVGFLCSDAARMI 229
Query: 252 NGNTLIVDGG 261
G TL+VDGG
Sbjct: 230 TGQTLVVDGG 239
|
This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242 |
| >gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 137 bits (346), Expect = 8e-39
Identities = 89/262 (33%), Positives = 132/262 (50%), Gaps = 23/262 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LKGK+AL+TG GIGF I+ K GA I + ++ +AA LGI A G D
Sbjct: 8 LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCD 67
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + +V G +DILVN A +P ++S FR VI+ID FI+
Sbjct: 68 VTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSK 127
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATL----HYTATWYQIHVSAAKAAVDSITRSLAL 185
+ + K G G+ IINI + + T + Y +AAK + +T+++A
Sbjct: 128 AVIPSMIKKGHGK--------IINICSMMSELGRETVSAY----AAAKGGLKMLTKNIAS 175
Query: 186 EWGTDYAIRVNGIAPGPI--KDTAGVSKLAPEEIRSKATDYM----AAYKFGEKWDIAMA 239
E+G + I+ NGI PG I TA + +L + R ++ A ++G+ D+A
Sbjct: 176 EYG-EANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGP 234
Query: 240 ALYLASDAGKYVNGNTLIVDGG 261
A++LASDA +VNG+ L VDGG
Sbjct: 235 AVFLASDASNFVNGHILYVDGG 256
|
Length = 265 |
| >gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 136 bits (344), Expect = 9e-39
Identities = 82/261 (31%), Positives = 121/261 (46%), Gaps = 25/261 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEG 68
L G+VA +TG GSGIG I++ L + GA +A+ R L + + G AI +
Sbjct: 6 LDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAA 65
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV + D V T G L + VNAA PAE++ ++TV++I+ G F+ C
Sbjct: 66 DVTSKADLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSC 125
Query: 129 HEALKYLKKGGRGQ----ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
+ + + G G AS S GII+N Q H +A+KA V +++SLA
Sbjct: 126 QAEARAMLENGGGSIVNIASMS--GIIVNRGLL--------QAHYNASKAGVIHLSKSLA 175
Query: 185 LEWGTDYAIRVNGIAPG----PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
+EW IRVN I+PG P+ + MA ++ A
Sbjct: 176 MEW-VGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPMQRMAKVD-----EMVGPA 229
Query: 241 LYLASDAGKYVNGNTLIVDGG 261
++L SDA + G L+VDGG
Sbjct: 230 VFLLSDAASFCTGVDLLVDGG 250
|
Length = 254 |
| >gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 135 bits (341), Expect = 3e-38
Identities = 91/252 (36%), Positives = 131/252 (51%), Gaps = 13/252 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GKVA++TGG SGIG I+ GA +A++ R + V A L G A GL D
Sbjct: 13 LSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLL---GGNAKGLVCD 69
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + V + I+ FG++DILVN+A L PAED+S + I+I+ G+F+M
Sbjct: 70 VSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQ 129
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+++ G GG I+N+++ A + A+KA V +T+ LALEWG
Sbjct: 130 AVGRHMIAAG--------GGKIVNLASQAGVVALERHVAYCASKAGVVGMTKVLALEWG- 180
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK 249
Y I VN I+P + T K E +A + A +F +IA AAL+LASDA
Sbjct: 181 PYGITVNAISP-TVVLTELGKKAWAGEKGERAKKLIPAGRFAYPEEIAAAALFLASDAAA 239
Query: 250 YVNGNTLIVDGG 261
+ G L++DGG
Sbjct: 240 MITGENLVIDGG 251
|
Length = 255 |
| >gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Score = 134 bits (340), Expect = 4e-38
Identities = 91/257 (35%), Positives = 131/257 (50%), Gaps = 13/257 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+GKVAL+TG +G+G I++ L + GA I GR + + +LG + L D
Sbjct: 3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE--PSETQQQVEALGRRFLSLTAD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ E +V+S + FG +DILVN A AE+ S + V+ ++ F +
Sbjct: 61 LSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQ 120
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
A K+ K GRG G IINI++ L + +A+K AV +T+ LA EW
Sbjct: 121 AAAKHFLKQGRG-------GKIINIASMLSFQGGIRVPSYTASKHAVAGLTKLLANEWAA 173
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA-TDYMAAYKFGEKWDIAMAALYLASDAG 248
I VN IAPG + T L +E R+ A + + A ++G DI A++LAS A
Sbjct: 174 -KGINVNAIAPGYM-ATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLASSAS 231
Query: 249 KYVNGNTLIVDGGNWLS 265
YVNG TL VDGG WL+
Sbjct: 232 DYVNGYTLAVDGG-WLA 247
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248 |
| >gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11 | Back alignment and domain information |
|---|
Score = 133 bits (337), Expect = 1e-37
Identities = 72/259 (27%), Positives = 120/259 (46%), Gaps = 17/259 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA---IGL 66
L GKVA++TG SGIG ++ + GA +A+ GR L + G+ + +
Sbjct: 1 LSGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLV 60
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
D+ + E R++ +T+ FG+LDILVN A ED + V+ ++
Sbjct: 61 VADLTEEEGQDRIISTTLAKFGRLDILVNNAGILAKGGGEDQDIEEYDKVMNLNLRAVIY 120
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
+ A+ +L K + G I+N+S+ + ++ +KAA+D TR ALE
Sbjct: 121 LTKLAVPHLIK---------TKGEIVNVSSVAGGRSFPGVLYYCISKAALDQFTRCTALE 171
Query: 187 WGTDYAIRVNGIAPG----PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242
+RVN ++PG G+ + + S+A + + G ++A A +
Sbjct: 172 LAP-KGVRVNSVSPGVIVTGFHRRMGMPEEQYIKFLSRAKETHPLGRPGTVDEVAEAIAF 230
Query: 243 LASDAGKYVNGNTLIVDGG 261
LASDA ++ G L VDGG
Sbjct: 231 LASDASSFITGQLLPVDGG 249
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253 |
| >gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 132 bits (335), Expect = 2e-37
Identities = 84/264 (31%), Positives = 124/264 (46%), Gaps = 34/264 (12%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
KGKVAL+TGG GIG I+ + GA +A++ + L G+ I + D
Sbjct: 5 FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSA---ENEAKELREKGVFTI--KCD 59
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V R+ + E FG++D+LVN A +L+P E+ + +I+I+ G +
Sbjct: 60 VGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTY 119
Query: 130 EALKYLKKGGRGQASSSSGGIIINISA-----TLHYTATWYQIHVSAAKAAVDSITRSLA 184
E L LK S G I+NI++ T T+Y I KA + +TR LA
Sbjct: 120 EFLPLLKL--------SKNGAIVNIASNAGIGTAAEGTTFYAI----TKAGIIILTRRLA 167
Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI-------RSKATDYMAAYKFGEKWDIA 237
E G Y IRVN +APG ++ +S + EE R+K G+ DIA
Sbjct: 168 FELG-KYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKT----TGKPEDIA 222
Query: 238 MAALYLASDAGKYVNGNTLIVDGG 261
L+LASD +Y+ G ++ DGG
Sbjct: 223 NIVLFLASDDARYITGQVIVADGG 246
|
Length = 255 |
| >gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR | Back alignment and domain information |
|---|
Score = 131 bits (332), Expect = 6e-37
Identities = 83/260 (31%), Positives = 127/260 (48%), Gaps = 25/260 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+GKVA++TG GSG G I+ + + GA + I A + G AI ++ D
Sbjct: 3 LEGKVAIVTGAGSGFGEGIARRFAQEGARVVIADINADGAERVAADI---GEAAIAIQAD 59
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMC 128
V KR D +VE+ ++ FG+LDILVN A P ++ F V ++ ++
Sbjct: 60 VTKRADVEAMVEAALSKFGRLDILVNNAGITHRNKPMLEVDEEEFDRVFAVNVKSIYLSA 119
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTA----TWYQIHVSAAKAAVDSITRSLA 184
+ ++++ G GG+IINI++T TWY +A+K V + T+++A
Sbjct: 120 QALVPHMEEQG--------GGVIINIASTAGLRPRPGLTWY----NASKGWVVTATKAMA 167
Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE---EIRSKATDYMAAYKFGEKWDIAMAAL 241
+E IRVN + P +T +S E E R+K + + DIA AAL
Sbjct: 168 VELAPR-NIRVNCLCP-VAGETPLLSMFMGEDTPENRAKFRATIPLGRLSTPDDIANAAL 225
Query: 242 YLASDAGKYVNGNTLIVDGG 261
YLASD ++ G L VDGG
Sbjct: 226 YLASDEASFITGVALEVDGG 245
|
This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248 |
| >gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 131 bits (332), Expect = 6e-37
Identities = 80/256 (31%), Positives = 123/256 (48%), Gaps = 14/256 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L G+VA++TG GSGIG + + GA + + R VAA + G A +GD
Sbjct: 3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAA-ERVAAAIAAGGRAFARQGD 61
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V E +V+ +G+LD+LVN A + V+ ++ G F+
Sbjct: 62 VGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAK 121
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
A+ +++ G GG I+N ++ L + A+K A+ S+TR++AL+ T
Sbjct: 122 YAIPIMQRQG--------GGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHAT 173
Query: 190 DYAIRVNGIAPGPIKD---TAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
D IRVN +APG I ++ A PE +R +FG ++A AAL+LAS
Sbjct: 174 D-GIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLAS 232
Query: 246 DAGKYVNGNTLIVDGG 261
D + G TL+VDGG
Sbjct: 233 DESSFATGTTLVVDGG 248
|
Length = 252 |
| >gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 131 bits (331), Expect = 1e-36
Identities = 95/271 (35%), Positives = 126/271 (46%), Gaps = 37/271 (13%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LKGKVAL+TG SGIG EI+L L K GA + I +A AL G AIG+ D
Sbjct: 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMD 61
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V E ++ + FG +DILVN A + P ED ++ +I I G F+
Sbjct: 62 VTDEEAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTK 121
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV-SAAKAAVDS-------ITR 181
AL +K G GG IIN+ A++H V SA KAA S +T+
Sbjct: 122 AALPIMKAQG--------GGRIINM-ASVHG-------LVGSAGKAAYVSAKHGLIGLTK 165
Query: 182 SLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-----------F 230
+ALE G + + VN I PG + DT V K P+ + + + F
Sbjct: 166 VVALE-GATHGVTVNAICPGYV-DTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRF 223
Query: 231 GEKWDIAMAALYLASDAGKYVNGNTLIVDGG 261
+IA AL+LAS A K V G +VDGG
Sbjct: 224 TTVEEIADYALFLASFAAKGVTGQAWVVDGG 254
|
Length = 258 |
| >gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 130 bits (329), Expect = 2e-36
Identities = 79/264 (29%), Positives = 121/264 (45%), Gaps = 22/264 (8%)
Query: 2 ESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGI 61
+ L GK A++TG G+GIG EI++ GA++ + V + LG
Sbjct: 4 SDNLR---LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG 60
Query: 62 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN----FLVPAEDLSPNGFRTVI 117
A D+ ++ + + ++ GK+DILVN A G F +P D FR
Sbjct: 61 QAFACRCDITSEQELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMAD-----FRRAY 115
Query: 118 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVD 177
E++ F + ++K G GG+I+ I++ +++KAA
Sbjct: 116 ELNVFSFFHLSQLVAPEMEKNG--------GGVILTITSMAAENKNINMTSYASSKAAAS 167
Query: 178 SITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA 237
+ R++A + G IRVNGIAPG I A S + P EI K + + G+ DIA
Sbjct: 168 HLVRNMAFDLGEK-NIRVNGIAPGAILTDALKSVITP-EIEQKMLQHTPIRRLGQPQDIA 225
Query: 238 MAALYLASDAGKYVNGNTLIVDGG 261
AAL+L S A +V+G L V GG
Sbjct: 226 NAALFLCSPAASWVSGQILTVSGG 249
|
Length = 255 |
| >gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 130 bits (330), Expect = 2e-36
Identities = 82/277 (29%), Positives = 129/277 (46%), Gaps = 38/277 (13%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LKGKVA++TGGG +G ++ +L + GA +AI+ R + + VA + + G A+ ++ D
Sbjct: 8 LKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKAD 67
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGN----------FLVPAE-----DLSPNGFR 114
V +E + + + FG DIL+N A GN + DL GF
Sbjct: 68 VLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFE 127
Query: 115 TVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKA 174
V +++ +GT + K + GG IINIS+ +T SAAKA
Sbjct: 128 FVFDLNLLGTLLPTQVFAKDMVGRK--------GGNIINISSMNAFTPLTKVPAYSAAKA 179
Query: 175 AVDSITRSLALEWGTDYAIRVNGIAPG---------PIKDTAGVSKLAPEEIRSKATDYM 225
A+ + T+ LA+ + IRVN IAPG + + G + E +K +
Sbjct: 180 AISNFTQWLAVHFAKV-GIRVNAIAPGFFLTEQNRALLFNEDG----SLTERANKILAHT 234
Query: 226 AAYKFGEKWDIAMAALYLASD-AGKYVNGNTLIVDGG 261
+FG+ ++ L+LA + A +V G L VDGG
Sbjct: 235 PMGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGG 271
|
Length = 278 |
| >gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 130 bits (329), Expect = 2e-36
Identities = 75/262 (28%), Positives = 117/262 (44%), Gaps = 20/262 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L G L+TGG SGIG I+ + GA + + + L + A L G D
Sbjct: 9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP--GAKVTATVAD 66
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA-EDLSPNGFRTVIEIDSVGTFIMC 128
V RV ++ + FG LD+LVN A ++++P + + ++ G F
Sbjct: 67 VADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFA 126
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
A+ LK G G G+II +S+ + +A+K AV + +SLA+E G
Sbjct: 127 RAAVPLLKASGHG-------GVIIALSSVAGRLGYPGRTPYAASKWAVVGLVKSLAIELG 179
Query: 189 TDYAIRVNGIAPG---------PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239
IRVN I PG I+ A + +E+ + + ++ + E DIA
Sbjct: 180 -PLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAAT 238
Query: 240 ALYLASDAGKYVNGNTLIVDGG 261
AL+LAS A +Y+ G + VDG
Sbjct: 239 ALFLASPAARYITGQAISVDGN 260
|
Length = 264 |
| >gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 129 bits (327), Expect = 3e-36
Identities = 78/254 (30%), Positives = 120/254 (47%), Gaps = 12/254 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEG 68
GKVAL+TG GIG I+L+L + G IA+ R + + +LG A+ ++
Sbjct: 2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKA 61
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
+V E + FG+LD+ VN AA L PA +L + + + I++
Sbjct: 62 NVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCA 121
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
EA K ++K G GG II++S+ V +KAA++++TR LA+E
Sbjct: 122 QEAAKLMEKVG--------GGKIISLSSLGSIRYLENYTTVGVSKAALEALTRYLAVELA 173
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
I VN ++ G + DT + EE+ A A + E D+A A L+L S
Sbjct: 174 P-KGIAVNAVSGGAV-DTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAVLFLCSPE 231
Query: 248 GKYVNGNTLIVDGG 261
+ G T+IVDGG
Sbjct: 232 ADMIRGQTIIVDGG 245
|
Length = 250 |
| >gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 130 bits (328), Expect = 3e-36
Identities = 86/275 (31%), Positives = 127/275 (46%), Gaps = 40/275 (14%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+GKVALLTG SGIG ++ + GA + I + A A +G AI + D
Sbjct: 4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIK---PARARLAALEIGPAAIAVSLD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V +++ R+V + + FG +DIL N AA + P D+S + + + ++ G F +
Sbjct: 61 VTRQDSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQ 120
Query: 130 EALKYLKKGGRGQASSSSGGIIINISA---------TLHYTATWYQIHVSAAKAAVDSIT 180
+++ + GR GG IIN+++ HY AT KAAV S T
Sbjct: 121 AVARHMVEQGR-------GGKIINMASQAGRRGEALVSHYCAT---------KAAVISYT 164
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDT----------AGVSKLAPEEIRSKATDYMAAYKF 230
+S AL + I VN IAPG + DT A P E + + + +
Sbjct: 165 QSAALAL-IRHGINVNAIAPGVV-DTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRM 222
Query: 231 GEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265
G D+ AL+LAS Y+ T VDGGNW+S
Sbjct: 223 GVPDDLTGMALFLASADADYIVAQTYNVDGGNWMS 257
|
Length = 257 |
| >gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 129 bits (327), Expect = 3e-36
Identities = 81/253 (32%), Positives = 119/253 (47%), Gaps = 13/253 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LKGKVA++TGG G+G + L GA + + ++A A LG A D
Sbjct: 3 LKGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAA---ELGDAARFFHLD 59
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + VV++ FG+LD+LVN A E + +R +++I+ G F+
Sbjct: 60 VTDEDGWTAVVDTAREAFGRLDVLVNNAGILTGGTVETTTLEEWRRLLDINLTGVFLGTR 119
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ +K+ G GG IIN+S+ +A+K AV +T+S ALE T
Sbjct: 120 AVIPPMKEAG--------GGSIINMSSIEGLVGDPALAAYNASKGAVRGLTKSAALECAT 171
Query: 190 -DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
Y IRVN + PG I T +L + + GE +IA A +YLASD
Sbjct: 172 QGYGIRVNSVHPGYIY-TPMTDELLIAQGEMGNYPNTPMGRAGEPDEIAYAVVYLASDES 230
Query: 249 KYVNGNTLIVDGG 261
+V G+ L+VDGG
Sbjct: 231 SFVTGSELVVDGG 243
|
This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247 |
| >gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR | Back alignment and domain information |
|---|
Score = 129 bits (327), Expect = 4e-36
Identities = 69/259 (26%), Positives = 118/259 (45%), Gaps = 18/259 (6%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
GKVAL+T SGIG I+ L + GA +AI R + L A + L + G + + D+
Sbjct: 1 GKVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRAGGAGVLAVVADLT 60
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
ED R+VE + FG++DILVN A G P +L+ + ++ + +
Sbjct: 61 DPEDIDRLVEKAGDAFGRVDILVNNAGGPPPGPFAELTDEDWLEAFDLKLLSVIRIVRAV 120
Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
L +K+ G I+NIS+ + + A+A + + ++L+ E D
Sbjct: 121 LPGMKE--------RGWGRIVNISSLTVKEPEPNLVLSNVARAGLIGLVKTLSRELAPD- 171
Query: 192 AIRVNGIAPGPI---------KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242
+ VN + PG I + A ++ EE + + + G+ ++A +
Sbjct: 172 GVTVNSVLPGYIDTERVRRLLEARAEKEGISVEEAEKEVASQIPLGRVGKPEELAALIAF 231
Query: 243 LASDAGKYVNGNTLIVDGG 261
LAS+ Y+ G ++VDGG
Sbjct: 232 LASEKASYITGQAILVDGG 250
|
This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253 |
| >gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 129 bits (326), Expect = 6e-36
Identities = 82/252 (32%), Positives = 115/252 (45%), Gaps = 9/252 (3%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L G+VAL+TG G+GFEI+ L GA + + GR L +AVAAL + G A L D
Sbjct: 9 LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFD 68
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ E G+LDILVN P +L R ++E D V ++
Sbjct: 69 IADEEAVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSR 128
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
A + +K+ G G II I++ A AAK + + R+LA E+G
Sbjct: 129 LAAQRMKRQG--------YGRIIAITSIAGQVARAGDAVYPAAKQGLTGLMRALAAEFGP 180
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK 249
+ I N IAPG + A + ++G +IA AA++LAS A
Sbjct: 181 -HGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFLASPAAS 239
Query: 250 YVNGNTLIVDGG 261
YVNG+ L VDGG
Sbjct: 240 YVNGHVLAVDGG 251
|
Length = 256 |
| >gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR | Back alignment and domain information |
|---|
Score = 128 bits (324), Expect = 1e-35
Identities = 85/274 (31%), Positives = 124/274 (45%), Gaps = 33/274 (12%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LK KVA++TGG +G ++ L + GA +A +GR + + +LG AI L D
Sbjct: 3 LKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGRAIALAAD 62
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGN---------FLVPAE-----DLSPNGFRT 115
V R R E + FG +DIL+N A GN P DL G+
Sbjct: 63 VLDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEGWEF 122
Query: 116 VIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAA 175
V +++ G+F+ K + + GG IINIS+ ++ SAAKAA
Sbjct: 123 VFDLNLNGSFLPSQVFGKDMLEQK--------GGSIINISSMNAFSPLTKVPAYSAAKAA 174
Query: 176 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY------- 228
V + T+ LA+E+ T +RVN IAPG L + TD
Sbjct: 175 VSNFTQWLAVEFATT-GVRVNAIAPGFFVTPQNRKLLINPD--GSYTDRSNKILGRTPMG 231
Query: 229 KFGEKWDIAMAALYLASD-AGKYVNGNTLIVDGG 261
+FG+ ++ A L+LAS+ A +V G + VDGG
Sbjct: 232 RFGKPEELLGALLFLASEKASSFVTGVVIPVDGG 265
|
D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271 |
| >gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1 | Back alignment and domain information |
|---|
Score = 128 bits (324), Expect = 2e-35
Identities = 82/267 (30%), Positives = 127/267 (47%), Gaps = 16/267 (5%)
Query: 2 ESPFKG-DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAALHS 58
E +KG LKGK AL+TGG SGIG +++ + GA +AI + + +
Sbjct: 15 EKSYKGSGKLKGKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEE 74
Query: 59 LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA-EDLSPNGFRTVI 117
G + + GD+ +V+ + FGKLDILVN AA + ED++
Sbjct: 75 EGRKCLLIPGDLGDESFCRDLVKEVVKEFGKLDILVNNAAYQHPQESIEDITTEQLEKTF 134
Query: 118 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVD 177
+ F + AL +LKKG IIN ++ Y + + + +A K A+
Sbjct: 135 RTNIFSMFYLTKAALPHLKKGSS----------IINTTSVTAYKGSPHLLDYAATKGAIV 184
Query: 178 SITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA 237
+ TR L+L+ + IRVN +APGPI T + PEE S+ + + G+ ++A
Sbjct: 185 AFTRGLSLQLA-EKGIRVNAVAPGPIW-TPLIPSSFPEEKVSEFGSQVPMGRAGQPAEVA 242
Query: 238 MAALYLASDAGKYVNGNTLIVDGGNWL 264
A ++LAS YV G L V+GG +
Sbjct: 243 PAYVFLASQDSSYVTGQVLHVNGGEII 269
|
These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270 |
| >gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 127 bits (322), Expect = 2e-35
Identities = 76/253 (30%), Positives = 113/253 (44%), Gaps = 10/253 (3%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+GK AL+TGG GIG+ I +L GA + R + L + G G D
Sbjct: 4 LEGKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGFKVEGSVCD 63
Query: 70 VRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
V R + ++++ +HF GKL+ILVN A N A+D + + ++ + + +
Sbjct: 64 VSSRSERQELMDTVASHFGGKLNILVNNAGTNIRKEAKDYTEEDYSLIMSTNFEAAYHLS 123
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
A LK G G I+ IS+ A A K A++ +TRSLA EW
Sbjct: 124 RLAHPLLKASGNGN--------IVFISSVAGVIAVPSGAPYGATKGALNQLTRSLACEWA 175
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
D IRVN +AP I + +E K + +FGE ++A +L A
Sbjct: 176 KD-NIRVNAVAPWVIATPLVEPVIQQKENLDKVIERTPLKRFGEPEEVAALVAFLCMPAA 234
Query: 249 KYVNGNTLIVDGG 261
Y+ G + VDGG
Sbjct: 235 SYITGQIIAVDGG 247
|
This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251 |
| >gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 126 bits (318), Expect = 5e-35
Identities = 86/249 (34%), Positives = 127/249 (51%), Gaps = 11/249 (4%)
Query: 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR 73
VA++TGG +GIG I+ L K GA++ I + + AA+ G AIGLE +V
Sbjct: 1 VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAIGLECNVTSE 60
Query: 74 EDAVRVVESTINHFGKLDILVNAAAGNFLVPAE-DLSPNGFRTVIEIDSVGTFIMCHEAL 132
+D VV++T++ FG + ILVN A G P + ++ F +++ F +
Sbjct: 61 QDLEAVVKATVSQFGGITILVNNAGGGGPKPFDMPMTEEDFEWAFKLNLFSAFRLSQLCA 120
Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
+++K G GG I+NIS+ ++KAAV+ +TR+LA + G
Sbjct: 121 PHMQKAG--------GGAILNISSMSSENKNVRIAAYGSSKAAVNHMTRNLAFDLGPK-G 171
Query: 193 IRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVN 252
IRVN +APG +K A S L P EI + + GE DIA AAL+L S A +V+
Sbjct: 172 IRVNAVAPGAVKTDALASVLTP-EIERAMLKHTPLGRLGEPEDIANAALFLCSPASAWVS 230
Query: 253 GNTLIVDGG 261
G L V GG
Sbjct: 231 GQVLTVSGG 239
|
This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242 |
| >gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Score = 126 bits (318), Expect = 5e-35
Identities = 90/256 (35%), Positives = 133/256 (51%), Gaps = 13/256 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEG 68
L GKVA++TGG GIG I++ L + GA + I K + V L G ++
Sbjct: 4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQA 63
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV K EDA R+VE +NHFGK+DILVN A + L+ + VI+++ F
Sbjct: 64 DVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTT 123
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
L Y+ + + G II+IS+ + + Q + SAAKA + T+SLALE
Sbjct: 124 SAVLPYI--------TEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELA 175
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
+ VN I PG I DT V+++ PEE+R K + +FG+ +IA +YL D G
Sbjct: 176 KT-NVTVNAICPGFI-DTEMVAEV-PEEVRQKIVAKIPKKRFGQADEIAKGVVYLCRD-G 231
Query: 249 KYVNGNTLIVDGGNWL 264
Y+ G L ++GG ++
Sbjct: 232 AYITGQQLNINGGLYM 247
|
Length = 247 |
| >gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Score = 125 bits (317), Expect = 1e-34
Identities = 77/261 (29%), Positives = 119/261 (45%), Gaps = 21/261 (8%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
GK AL+TG SGIG I+ L GA + + + +A G I L DV
Sbjct: 1 GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGSVIYLPADVT 60
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
K ++ ++ + FG LDILVN A + P E+ P + +I + F A
Sbjct: 61 KEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAVMLTSAFHTIRAA 120
Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
L ++KK G G+ IINI++ A+ ++ AAK + +T+ LALE ++
Sbjct: 121 LPHMKKQGWGR--------IINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALE-VAEH 171
Query: 192 AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY-----------MAAYKFGEKWDIAMAA 240
I VN I PG + T V K ++ +++ +F ++A A
Sbjct: 172 GITVNAICPGYV-RTPLVEKQIADQAKTRGIPEEQVIREVMLKGQPTKRFVTVDEVAETA 230
Query: 241 LYLASDAGKYVNGNTLIVDGG 261
LYLASDA + G +++DGG
Sbjct: 231 LYLASDAAAQITGQAIVLDGG 251
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255 |
| >gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 126 bits (317), Expect = 1e-34
Identities = 85/257 (33%), Positives = 131/257 (50%), Gaps = 13/257 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GKVA++TGG +G+G ++ L K GA I I+ T + G ++ D
Sbjct: 13 LDGKVAIVTGGNTGLGQGYAVALAKAGADI-IITTHGTNWDETRRLIEKEGRKVTFVQVD 71
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ K E A +VV+ + FGK+DILVN A P + + V++I+ + +
Sbjct: 72 LTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQ 131
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
K + K G G+ IINI++ L + + +A+K V +T++ A E
Sbjct: 132 AVAKVMAKQGSGK--------IINIASMLSFQGGKFVPAYTASKHGVAGLTKAFANELA- 182
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT-DYMAAYKFGEKWDIAMAALYLASDAG 248
Y I+VN IAPG IK TA + + ++ R+ + A ++GE D+ AA++LAS A
Sbjct: 183 AYNIQVNAIAPGYIK-TANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFLASRAS 241
Query: 249 KYVNGNTLIVDGGNWLS 265
YVNG+ L VDGG WL
Sbjct: 242 DYVNGHILAVDGG-WLV 257
|
Length = 258 |
| >gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR | Back alignment and domain information |
|---|
Score = 124 bits (313), Expect = 3e-34
Identities = 76/255 (29%), Positives = 112/255 (43%), Gaps = 18/255 (7%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
+V L+TG G+G I+ + GA + + R T AVAA G AI ++ DVR
Sbjct: 1 QVVLVTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAA--EAGERAIAIQADVRD 58
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNFLV------PAEDLSPNGFRTVIEIDSVGTFI 126
R+ ++E NHFG +D +VN A +F + + ++ +E G
Sbjct: 59 RDQVQAMIEEAKNHFGPVDTIVNNALIDFPFDPDQRKTFDTIDWEDYQQQLEGAVKGALN 118
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
+ L K+ G G+ +INI L + AKAA+ TR++A E
Sbjct: 119 LLQAVLPDFKERGSGR--------VINIGTNLFQNPVVPYHDYTTAKAALLGFTRNMAKE 170
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
G Y I VN ++ G +K T S P+E+ K DIA A L+ AS
Sbjct: 171 LG-PYGITVNMVSGGLLKVT-DASAATPKEVFDAIAQTTPLGKVTTPQDIADAVLFFASP 228
Query: 247 AGKYVNGNTLIVDGG 261
+ V G L+VDGG
Sbjct: 229 WARAVTGQNLVVDGG 243
|
This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246 |
| >gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 124 bits (313), Expect = 5e-34
Identities = 69/260 (26%), Positives = 109/260 (41%), Gaps = 18/260 (6%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMG-RRKTVLRSAVAALHSLGIPAIGLEGDV 70
KVA++TG GIG I+ +L G I + + +S + + G A+ + DV
Sbjct: 2 SKVAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYNAVAVGADV 61
Query: 71 RKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
++D +++ + FG D++VN A + P ++ + V ++ G
Sbjct: 62 TDKDDVEALIDQAVEKFGSFDVMVNNAGIAPITPLLTITEEDLKKVYAVNVFGVLFGIQA 121
Query: 131 ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTD 190
A + KK G GG IIN S+ SA+K AV +T++ A E
Sbjct: 122 AARQFKKLGH-------GGKIINASSIAGVQGFPNLGAYSASKFAVRGLTQTAAQELA-P 173
Query: 191 YAIRVNGIAPGPIKDT------AGVSKLA--PEEIRSKATDYMAAYK-FGEKWDIAMAAL 241
I VN APG +K V ++A PE E D+A
Sbjct: 174 KGITVNAYAPGIVKTEMWDYIDEEVGEIAGKPEGEGFAEFSSSIPLGRLSEPEDVAGLVS 233
Query: 242 YLASDAGKYVNGNTLIVDGG 261
+LAS+ Y+ G T++VDGG
Sbjct: 234 FLASEDSDYITGQTILVDGG 253
|
2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 123 bits (310), Expect = 1e-33
Identities = 78/262 (29%), Positives = 120/262 (45%), Gaps = 37/262 (14%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L G+V L+TGG GIG I+ GA + + GRR A G PA D
Sbjct: 4 LTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRR--------APETVDGRPAEFHAAD 55
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
VR + +V++ + G+LD+LVN A G+ A + SP ++E++ + ++
Sbjct: 56 VRDPDQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQ 115
Query: 130 EALKYLKKGGRGQASSSSGGIIINISA---------TLHYTATWYQIHVSAAKAAVDSIT 180
A +++ GG I+NI + T Y AAKA + ++T
Sbjct: 116 AANAVMQQ-------QPGGGSIVNIGSVSGRRPSPGTAAY---------GAAKAGLLNLT 159
Query: 181 RSLALEWGTDYAIRVNGIAPGPIK-DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239
RSLA+EW +RVN + G ++ + + + E I + A + + DIA A
Sbjct: 160 RSLAVEWAPK--VRVNAVVVGLVRTEQSELHYGDAEGIAAVA-ATVPLGRLATPADIAWA 216
Query: 240 ALYLASDAGKYVNGNTLIVDGG 261
L+LASD YV+G L V GG
Sbjct: 217 CLFLASDLASYVSGANLEVHGG 238
|
Length = 252 |
| >gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8 | Back alignment and domain information |
|---|
Score = 122 bits (309), Expect = 1e-33
Identities = 73/265 (27%), Positives = 110/265 (41%), Gaps = 29/265 (10%)
Query: 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGD 69
+ K+ L+TG IG L GA + + L L +L I LE D
Sbjct: 1 EDKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIALELD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLV---PAEDLSPNGFRTVIEIDSVGTFI 126
+ +E ++ES + FG++DIL+N A + V E+ + V+ ++ G F+
Sbjct: 61 ITSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGAFL 120
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATL--------HYTATWYQ--IHVSAAKAAV 176
+K KK G IINI++ Y T + S KA +
Sbjct: 121 CSQAFIKLFKK--------QGKGSIINIASIYGVIAPDFRIYENTQMYSPVEYSVIKAGI 172
Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
+T+ LA + D IRVN I+PG I + P E K T + D+
Sbjct: 173 IHLTKYLAKYYA-DTGIRVNAISPGGILNNQ------PSEFLEKYTKKCPLKRMLNPEDL 225
Query: 237 AMAALYLASDAGKYVNGNTLIVDGG 261
A ++L SDA YV G L++DGG
Sbjct: 226 RGAIIFLLSDASSYVTGQNLVIDGG 250
|
This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 123 bits (310), Expect = 2e-33
Identities = 89/269 (33%), Positives = 122/269 (45%), Gaps = 26/269 (9%)
Query: 2 ESPF-KG-DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM----GRRKTVLRSAVAA 55
E+P KG LKGKVAL+TGG SGIG +++ K GA IAI+ + V
Sbjct: 34 EAPNYKGSGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEK 93
Query: 56 LHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA---EDLSPNG 112
G+ + + GDV VE T+ G+LDILVN AA F P ED++
Sbjct: 94 ---EGVKCLLIPGDVSDEAFCKDAVEETVRELGRLDILVNNAA--FQYPQQSLEDITAEQ 148
Query: 113 FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 172
+ + F M AL +LK G IIN + Y I SA
Sbjct: 149 LDKTFKTNIYSYFHMTKAALPHLK----------QGSAIINTGSITGYEGNETLIDYSAT 198
Query: 173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 232
K A+ + TRSLA IRVN +APGPI S E++ ++ + G+
Sbjct: 199 KGAIHAFTRSLAQSLVQK-GIRVNAVAPGPIWTPLIPSDFDEEKVSQFGSN-TPMQRPGQ 256
Query: 233 KWDIAMAALYLASDAGKYVNGNTLIVDGG 261
++A A ++LAS Y+ G L V+GG
Sbjct: 257 PEELAPAYVFLASPDSSYITGQMLHVNGG 285
|
Length = 290 |
| >gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional | Back alignment and domain information |
|---|
Score = 122 bits (307), Expect = 3e-33
Identities = 74/254 (29%), Positives = 111/254 (43%), Gaps = 11/254 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLE 67
L G+ AL+TG GIG I+ + GA + I+ R L A L GL
Sbjct: 7 LDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLA 66
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
DV ED +++ +H+ L ILVN A GN A D + + +R + E + F +
Sbjct: 67 ADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFEL 126
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
A LK+ + I+NI + T KAA+ +TR+LA+EW
Sbjct: 127 SRYAHPLLKQ--------HASSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNLAVEW 178
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
D IRVN +AP I+ L+ + + + + GE ++A A +L A
Sbjct: 179 AED-GIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAFLCMPA 237
Query: 248 GKYVNGNTLIVDGG 261
Y+ G + VDGG
Sbjct: 238 ASYITGQCIAVDGG 251
|
Length = 257 |
| >gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 121 bits (305), Expect = 6e-33
Identities = 81/254 (31%), Positives = 115/254 (45%), Gaps = 13/254 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L +VA++TG G G+G I+L + GA + I R ++ L + + G A + D
Sbjct: 8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAAD 67
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ E + + FG+LDI+VN G P S + +
Sbjct: 68 LAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTV 127
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
A+ + + S GG +INIS+T+ A AKAA+ TR AL
Sbjct: 128 AAVPLMLE-------HSGGGSVINISSTMGRLAGRGFAAYGTAKAALAHYTRLAAL---- 176
Query: 190 DYA--IRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
D IRVN IAPG I +A A +E+R+ + G+ DIA AA+YLAS A
Sbjct: 177 DLCPRIRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLASPA 236
Query: 248 GKYVNGNTLIVDGG 261
G Y+ G TL VDGG
Sbjct: 237 GSYLTGKTLEVDGG 250
|
Length = 263 |
| >gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 121 bits (305), Expect = 7e-33
Identities = 81/262 (30%), Positives = 124/262 (47%), Gaps = 24/262 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LK KV ++TGG G+G ++ L + GA +A++ + L AVA +LG G +
Sbjct: 3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAAN 62
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAED------LSPNGFRTVIEID 120
V ED FG+L+ L+N A LV A+D +S F++VI+++
Sbjct: 63 VTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVN 122
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
G F+ EA + + G G+IINIS+ Q + SA+KA V ++T
Sbjct: 123 LTGVFLCGREAAAKMIESGS-------KGVIINISSIARA-GNMGQTNYSASKAGVAAMT 174
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
+ A E Y IRV IAPG I+ T + + P E + + + GE +IA
Sbjct: 175 VTWAKELAR-YGIRVAAIAPGVIE-TEMTAAMKP-EALERLEKMIPVGRLGEPEEIAHTV 231
Query: 241 LY-LASDAGKYVNGNTLIVDGG 261
+ + +D YV G L +DGG
Sbjct: 232 RFIIEND---YVTGRVLEIDGG 250
|
Length = 253 |
| >gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 120 bits (302), Expect = 1e-32
Identities = 77/257 (29%), Positives = 114/257 (44%), Gaps = 21/257 (8%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP--AIGLEGDV 70
KVA++TGG SGIG + L K GA +AI+ R + A A L ++ A ++ DV
Sbjct: 1 KVAIITGGASGIGLATAKLLLKKGAKVAILDRNENP--GAAAELQAINPKVKATFVQCDV 58
Query: 71 RKREDAVRVVESTINHFGKLDILVNAAAGN---FLVPAEDLSPNGFRTVIEIDSVGTFIM 127
E + I FG++DIL+N A + A L P + I+++ G
Sbjct: 59 TSWEQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPP-WEKTIDVNLTGVINT 117
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
+ AL Y+ K G GG+I+NI + SA+K V TRSLA
Sbjct: 118 TYLALHYMDKNKGG-----KGGVIVNIGSVAGLYPAPQFPVYSASKHGVVGFTRSLADLL 172
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
+RVN I PG +T + ++ +K + + + +A A +YL D
Sbjct: 173 EYKTGVRVNAICPGFT-NTPLL-----PDLVAKEAEMLPSAPTQSPEVVAKAIVYLIEDD 226
Query: 248 GKYVNGNTLIVDGGNWL 264
K NG IVDGG +
Sbjct: 227 EK--NGAIWIVDGGKLI 241
|
This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244 |
| >gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 120 bits (302), Expect = 1e-32
Identities = 83/254 (32%), Positives = 124/254 (48%), Gaps = 12/254 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GK+AL+TG GIG I+ L + GA + + R+ ++ A+ + G A L
Sbjct: 6 LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACH 65
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
+ + E + G+LDILVN AA N + D F+ ++++ G F M
Sbjct: 66 IGEMEQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMS 125
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
EA K +K+ G GG I+N+++ + +Q S KAAV S+T++ A E
Sbjct: 126 VEAGKLMKEQG--------GGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECA 177
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
IRVN + PG + DT S L + I +A ++ + E ++A A LYLASDA
Sbjct: 178 PF-GIRVNALLPG-LTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYLASDA 235
Query: 248 GKYVNGNTLIVDGG 261
Y G L VDGG
Sbjct: 236 SSYTTGECLNVDGG 249
|
Length = 252 |
| >gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 118 bits (298), Expect = 7e-32
Identities = 82/256 (32%), Positives = 121/256 (47%), Gaps = 13/256 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GKVA++TG SGIG + + GA + + RR+ L VA + + G A+ L GD
Sbjct: 4 LNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGD 63
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
VR A +V + FG LDI N A + P ++S G+R + + F+
Sbjct: 64 VRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGA 123
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA-KAAVDSITRSLALEW 187
+ + G GG +I S + +TA + + AA KA + +T+ LA E+
Sbjct: 124 KHQIPAMLARG--------GGSLIFTSTFVGHTAGFPGMAAYAASKAGLIGLTQVLAAEY 175
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
G IRVN + PG DT + E + A + + +IA AAL+LASD
Sbjct: 176 GAQ-GIRVNALLPGGT-DTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAALFLASD 233
Query: 247 AGKYVNGNTLIVDGGN 262
A +V G L+VDGG
Sbjct: 234 AASFVTGTALLVDGGV 249
|
Length = 254 |
| >gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 117 bits (295), Expect = 1e-31
Identities = 82/257 (31%), Positives = 129/257 (50%), Gaps = 13/257 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+GKVA++TG +G+G ++L L + G I +G + + +LG + L D
Sbjct: 8 LEGKVAVVTGCDTGLGQGMALGLAEAGCDI--VGINIVEPTETIEQVTALGRRFLSLTAD 65
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+RK + ++E + FG +DILVN A A + S + V+ ++ F M
Sbjct: 66 LRKIDGIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQ 125
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
A K+ G +GG IINI++ L + +A+K+ V +TR +A EW
Sbjct: 126 AAAKHFIAQG-------NGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAK 178
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT-DYMAAYKFGEKWDIAMAALYLASDAG 248
+ I VN IAPG + T +L +E RS D + A ++G D+ ++LAS A
Sbjct: 179 -HNINVNAIAPGYMA-TNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLASSAS 236
Query: 249 KYVNGNTLIVDGGNWLS 265
Y+NG T+ VDGG WL+
Sbjct: 237 DYINGYTIAVDGG-WLA 252
|
Length = 253 |
| >gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 117 bits (295), Expect = 2e-31
Identities = 76/256 (29%), Positives = 122/256 (47%), Gaps = 16/256 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL----GIPAIG 65
L + L+TGG G+G I+++L GA + ++ R+ A+ + G A+G
Sbjct: 4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALG 63
Query: 66 LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 125
L DVR +++ + FG+LDILVN A +LS + VI+++ G F
Sbjct: 64 LAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFF 123
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
+ AL + + R GG I+NI++ Q++ +A+KA + +T++LA
Sbjct: 124 NVTQAALPPMIRARR-------GGRIVNIASVAGVRGNRGQVNYAASKAGLIGLTKTLAN 176
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
E I VN +APG I +T AP E + + + GE ++A +L S
Sbjct: 177 ELA-PRGITVNAVAPGAI-NTPMADNAAPTE---HLLNPVPVQRLGEPDEVAALVAFLVS 231
Query: 246 DAGKYVNGNTLIVDGG 261
DA YV G + VDGG
Sbjct: 232 DAASYVTGQVIPVDGG 247
|
Length = 249 |
| >gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 116 bits (293), Expect = 3e-31
Identities = 71/193 (36%), Positives = 100/193 (51%), Gaps = 13/193 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LKGKVAL+TGG GIGF I+ L G +AI R + L A A L++ G +GL D
Sbjct: 4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKG-NVLGLAAD 62
Query: 70 VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
VR D R V++ + FG LD+L+ NA G+F P E+L+P +R VI+ + G F
Sbjct: 63 VRDEADVQRAVDAIVAAFGGLDVLIANAGVGHF-APVEELTPEEWRLVIDTNLTGAFYTI 121
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
A+ LK+G GG IINIS+ +A+K + + + L+
Sbjct: 122 KAAVPALKRG---------GGYIINISSLAGTNFFAGGAAYNASKFGLVGFSEAAMLDL- 171
Query: 189 TDYAIRVNGIAPG 201
Y I+V+ I PG
Sbjct: 172 RQYGIKVSTIMPG 184
|
Length = 237 |
| >gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 116 bits (293), Expect = 4e-31
Identities = 84/258 (32%), Positives = 121/258 (46%), Gaps = 22/258 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+GK AL+TGG SGIG E + Q GA +AI GR L +A A LG A+ + D
Sbjct: 4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAE---LGESALVIRAD 60
Query: 70 VRKREDAVRVVESTINHFGKLDIL-VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
+ ++ FG+LD + +NA F P ED F + G + +
Sbjct: 61 AGDVAAQKALAQALAEAFGRLDAVFINAGVAKFA-PLEDWDEAMFDRSFNTNVKGPYFLI 119
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
L L AS I++N S H ++ +A+KAA+ S+ ++L+ E
Sbjct: 120 QALLPLLANP----AS-----IVLNGSINAHIGMPNSSVY-AASKAALLSLAKTLSGEL- 168
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMAAY----KFGEKWDIAMAALYL 243
IRVN ++PGP+ T KL PE + A +FG +IA A LYL
Sbjct: 169 LPRGIRVNAVSPGPV-QTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYL 227
Query: 244 ASDAGKYVNGNTLIVDGG 261
ASD ++ G+ +IVDGG
Sbjct: 228 ASDESAFIVGSEIIVDGG 245
|
Length = 249 |
| >gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 120 bits (304), Expect = 1e-30
Identities = 81/272 (29%), Positives = 116/272 (42%), Gaps = 35/272 (12%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GKVAL+TG GIG + +L GA + + + +A A L A+G+ D
Sbjct: 420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPD-RALGVACD 478
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLV-PAEDLSPNGFRTVIEIDSVGTFIMC 128
V E FG +DI+V+ AG + P E+ S +R ++++ G F++
Sbjct: 479 VTDEAAVQAAFEEAALAFGGVDIVVS-NAGIAISGPIEETSDEDWRRSFDVNATGHFLVA 537
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHY---TATWYQIHVSAAKAAVDSITRSLAL 185
EA++ +K G G G I+ S Y AAKAA + R LAL
Sbjct: 538 REAVRIMKAQGLG------GSIVFIASKNAVNPGPNFGAY----GAAKAAELHLVRQLAL 587
Query: 186 EWGTDYAIRVNGIAP------------GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEK 233
E G D IRVNG+ P I+ A L+ EE+ Y A +
Sbjct: 588 ELGPD-GIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEEL---EEFYRARNLLKRE 643
Query: 234 W---DIAMAALYLASDAGKYVNGNTLIVDGGN 262
D+A A ++LAS G + VDGGN
Sbjct: 644 VTPEDVAEAVVFLASGLLSKTTGAIITVDGGN 675
|
Length = 681 |
| >gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 118 bits (298), Expect = 3e-30
Identities = 77/259 (29%), Positives = 118/259 (45%), Gaps = 24/259 (9%)
Query: 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDV 70
+ +V L+TG GIG + + G + + R + A SLG L DV
Sbjct: 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRN---VERARERADSLGPDHHALAMDV 60
Query: 71 RKREDAVRVVESTINHFGKLDILVNAAA--GNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
E FG++D+LVN A + D + F + I+ G +++
Sbjct: 61 SDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVA 120
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
EAL+ + + G G A I+N+++ A + SA+KAAV S+TRSLA EW
Sbjct: 121 REALRLMIEQGHGAA-------IVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWA 173
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY------KFGEKWDIAMAALY 242
IRVN + PG ++ +++ E R+ D A + G +IA A +
Sbjct: 174 AK-GIRVNAVLPGYVR-----TQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFF 227
Query: 243 LASDAGKYVNGNTLIVDGG 261
LASD Y+ G+TL+VDGG
Sbjct: 228 LASDQASYITGSTLVVDGG 246
|
Length = 520 |
| >gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12 | Back alignment and domain information |
|---|
Score = 113 bits (285), Expect = 3e-30
Identities = 77/258 (29%), Positives = 119/258 (46%), Gaps = 18/258 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+GKVA++TG G+GIG + +L + GA + + +A A + + A+ L D
Sbjct: 1 LEGKVAIVTGAGAGIGAACAARLAREGARVVVADID---GGAAQAVVAQIAGGALALRVD 57
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA-EDLSPNGFRTVIEIDSVGTFIMC 128
V + + E + FG LD+LVN A L PA D + + I+ GTF+ C
Sbjct: 58 VTDEQQVAALFERAVEEFGGLDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGTFLCC 117
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
A + + GG I+N+S+ + A+KAA+ ++TR+LA E
Sbjct: 118 RHAAPRMI--------ARGGGSIVNLSSIAGQSGDPGYGAYGASKAAIRNLTRTLAAELR 169
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY-----KFGEKWDIAMAALYL 243
IR N +APG I ++KLA E + + G D+A A ++L
Sbjct: 170 HA-GIRCNALAPGLIDTPLLLAKLAGFEGALGPGGFHLLIHQLQGRLGRPEDVAAAVVFL 228
Query: 244 ASDAGKYVNGNTLIVDGG 261
SD ++ G L VDGG
Sbjct: 229 LSDDASFITGQVLCVDGG 246
|
These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246 |
| >gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 113 bits (284), Expect = 5e-30
Identities = 82/258 (31%), Positives = 120/258 (46%), Gaps = 18/258 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIG-LEG 68
L GKVA++TGG SGIG + KHGA + I AVAA LG P I +
Sbjct: 2 LDGKVAIITGGASGIGEATARLFAKHGARVVIADIDDD-AGQAVAA--ELGDPDISFVHC 58
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAA--GNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
DV D V++ + FG+LDI+ N A G + S F V++++ G F+
Sbjct: 59 DVTVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVYGAFL 118
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
A + + +G I+++++ +A+K AV +TRS A E
Sbjct: 119 GTKHAARVMIPAKKGS--------IVSVASVAGVVGGLGPHAYTASKHAVLGLTRSAATE 170
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG---EKWDIAMAALYL 243
G ++ IRVN ++P + + E+ + AA G DIA A LYL
Sbjct: 171 LG-EHGIRVNCVSPYGVATPLLTAGFGVEDEAIEEAVRGAANLKGTALRPEDIAAAVLYL 229
Query: 244 ASDAGKYVNGNTLIVDGG 261
ASD +YV+G L+VDGG
Sbjct: 230 ASDDSRYVSGQNLVVDGG 247
|
Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249 |
| >gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 1e-29
Identities = 76/262 (29%), Positives = 115/262 (43%), Gaps = 23/262 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA--IGLE 67
L GKVAL+TG GIG I+ + GAA+A+ + A AA+ A + +
Sbjct: 5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVP 64
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFI 126
DV V + FG LD+LVN A N F P ++ +R +D G +
Sbjct: 65 ADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLA-MTDEDWRRCFAVDLDGAWN 123
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
C L + + GRG I+NI++T + AK + +TR+L +E
Sbjct: 124 GCRAVLPGMVERGRGS--------IVNIASTHAFKIIPGCFPYPVAKHGLLGLTRALGIE 175
Query: 187 WGTDYA---IRVNGIAPGPIKDTAGVSKLA----PEEIRSKATDYMAAYKFGEKWDIAMA 239
YA +RVN IAPG I+ P R++ + G ++AM
Sbjct: 176 ----YAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMT 231
Query: 240 ALYLASDAGKYVNGNTLIVDGG 261
A++LASD ++N + +DGG
Sbjct: 232 AVFLASDEAPFINATCITIDGG 253
|
Length = 260 |
| >gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 111 bits (280), Expect = 2e-29
Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 18/256 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
KVA++TG GIG + L + GA++ + + + G AI ++ D
Sbjct: 4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVD 63
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
V + A + ++T++ FG +D LVN AA G L + + ++ + ++ G +
Sbjct: 64 VSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALV 123
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-YQIHVSAAKAAVDSITRSLAL 185
K++ K G GG I+N S+ TA W Y AK ++ +T+ LA
Sbjct: 124 CTRAVYKHMAKRG--------GGAIVNQSS----TAAWLYSNFYGLAKVGLNGLTQQLAR 171
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
E G IRVN IAPGPI DT + P+E + + + G D+ L+L S
Sbjct: 172 ELGG-MNIRVNAIAPGPI-DTEATRTVTPKEFVADMVKGIPLSRMGTPEDLVGMCLFLLS 229
Query: 246 DAGKYVNGNTLIVDGG 261
D ++ G VDGG
Sbjct: 230 DEASWITGQIFNVDGG 245
|
Length = 250 |
| >gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family | Back alignment and domain information |
|---|
Score = 111 bits (280), Expect = 3e-29
Identities = 78/272 (28%), Positives = 123/272 (45%), Gaps = 29/272 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-------------LRSAVAAL 56
L+GKVA +TG G G +++L GA I + + L +
Sbjct: 1 LEGKVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLV 60
Query: 57 HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV 116
+LG + + DVR + VVE + FG+LD++V A + +LS + TV
Sbjct: 61 EALGRKVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVLSYGRSWELSEEQWDTV 120
Query: 117 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 176
++I+ G + C + ++ + G +GG II S+ A H +AAK +
Sbjct: 121 LDINLTGVWRTCKAVVPHMIERG-------NGGSIIITSSVAGLKALPGLAHYAAAKHGL 173
Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK------- 229
+T++LA E +Y IRVN I P + DT ++ A E K + A+
Sbjct: 174 VGLTKTLANELA-EYGIRVNSIHPYSV-DTPMIAPEAMREAFLKYPEAARAFMPALPVSG 231
Query: 230 FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 261
F D+A A L+LASD +Y+ G+ L VD G
Sbjct: 232 FVPPEDVADAVLWLASDESRYITGHQLPVDAG 263
|
Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265 |
| >gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated | Back alignment and domain information |
|---|
Score = 110 bits (278), Expect = 5e-29
Identities = 78/263 (29%), Positives = 122/263 (46%), Gaps = 23/263 (8%)
Query: 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDV 70
KVAL+TG G GIGF I+ +L + G +AI+ + ++A L G AI ++ DV
Sbjct: 1 MSKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADV 60
Query: 71 RKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI---M 127
R+ V ++ FG L+++VN A P E ++ F V I+ G
Sbjct: 61 SDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQA 120
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
EA K L GG+ ++S G++ N ++ S+ K AV +T++ A +
Sbjct: 121 AQEAFKKLGHGGKIINATSQAGVVGNPELAVY----------SSTKFAVRGLTQTAARDL 170
Query: 188 GTDYAIRVNGIAPGPIK-----DTA-GVSKLA--PEEIRSKA-TDYMAAYKFGEKWDIAM 238
++ I VN APG +K D A V + A P+E + + + E D+A
Sbjct: 171 ASE-GITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVAN 229
Query: 239 AALYLASDAGKYVNGNTLIVDGG 261
+LA Y+ G T+IVDGG
Sbjct: 230 CVSFLAGPDSDYITGQTIIVDGG 252
|
Length = 256 |
| >gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 6e-29
Identities = 71/252 (28%), Positives = 107/252 (42%), Gaps = 21/252 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+GKV +TGG G+G + L GA +A++GR L + + + + G+ D
Sbjct: 5 LQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGI--D 62
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ + A R V+ FG+LD LVN A D + + + ++ T
Sbjct: 63 LVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASK 122
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
AL L ++S GG I+NI A A +AAKA V +T +LA E
Sbjct: 123 AALPAL--------TASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELL- 173
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK 249
D I VN + P I DT P+ S ++ IA +L SD +
Sbjct: 174 DRGITVNAVLPSII-DTPPNRADMPDADFS---------RWVTPEQIAAVIAFLLSDEAQ 223
Query: 250 YVNGNTLIVDGG 261
+ G ++ VDGG
Sbjct: 224 AITGASIPVDGG 235
|
Length = 239 |
| >gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 4e-28
Identities = 76/266 (28%), Positives = 125/266 (46%), Gaps = 22/266 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LKGKV +++G G G+G ++++ + GA + + R L A + LG A+ + D
Sbjct: 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTD 62
Query: 70 VRKREDAVRVVESTINHFGKLDILVN-AAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
+ + +V + FG++D LVN A + P D +R VIE++ +GT +
Sbjct: 63 ITDEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLT 122
Query: 129 HEALKYLKKGGRGQASSSSGGIIINI-SATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
L + SGG I+ I S L ++ Y + AK A+ + ++SLA E
Sbjct: 123 QAFTPALAE---------SGGSIVMINSMVLRHSQPKYGAY-KMAKGALLAASQSLATEL 172
Query: 188 GTDYAIRVNGIAPG-----PIKD----TAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 238
G IRVN +APG P+K AG + E+I ++ + ++A
Sbjct: 173 G-PQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVAS 231
Query: 239 AALYLASDAGKYVNGNTLIVDGGNWL 264
A L+LASD + + G TL V+ G +
Sbjct: 232 AVLFLASDLARAITGQTLDVNCGEYH 257
|
Length = 258 |
| >gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 107 bits (270), Expect = 6e-28
Identities = 78/257 (30%), Positives = 116/257 (45%), Gaps = 21/257 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA-LHSLGIPAIGLEG 68
L KVA++TG GIG I+ +L G A+A+ + A + + G AI ++
Sbjct: 3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQA 62
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV R+ ++ FG++D+LVN A L D F I + G F++
Sbjct: 63 DVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVL 122
Query: 129 HEALKYLKKGGRGQASSSSGGIIINIS----ATLHYTATWYQIHVSAAKAAVDSITRSLA 184
EA ++L +GGR IIN+S A Y +A+KAAV+ + LA
Sbjct: 123 REAARHLGQGGR----------IINLSTSVIALPLPGYGPY----AASKAAVEGLVHVLA 168
Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
E I VN +APGP+ + + E+I A + G +IA A +LA
Sbjct: 169 NELRGR-GITVNAVAPGPVATELFFNGKSAEQIDQLA-GLAPLERLGTPEEIAAAVAFLA 226
Query: 245 SDAGKYVNGNTLIVDGG 261
G +VNG L V+GG
Sbjct: 227 GPDGAWVNGQVLRVNGG 243
|
Length = 245 |
| >gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 107 bits (270), Expect = 8e-28
Identities = 60/196 (30%), Positives = 89/196 (45%), Gaps = 20/196 (10%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
KV L+TG SGIG ++L L G IA R L S L+ LE DV
Sbjct: 1 KVVLITGCSSGIGLALALALAAQGYRVIATA-RNPDKLESLGELLND---NLEVLELDVT 56
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
E V+ I FG++D+LVN A P E+ S R + E++ G +
Sbjct: 57 DEESIKAAVKEVIERFGRIDVLVNNAGYGLFGPLEETSIEEVRELFEVNVFGPLRVTRAF 116
Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE---WG 188
L ++K G I+N+S+ T + A+KAA+++++ SL LE +G
Sbjct: 117 LPLMRK--------QGSGRIVNVSSVAGLVPTPFLGPYCASKAALEALSESLRLELAPFG 168
Query: 189 TDYAIRVNGIAPGPIK 204
I+V I PGP++
Sbjct: 169 ----IKVTIIEPGPVR 180
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248 |
| >gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 111 bits (278), Expect = 1e-27
Identities = 73/256 (28%), Positives = 113/256 (44%), Gaps = 17/256 (6%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
+V +TGG GIG ++ + G + I+ R A +LG + ++ D+
Sbjct: 269 PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDA---EGAKKLAEALGDEHLSVQADIT 325
Query: 72 KREDAVRVVESTINHFGKLDILVN-AAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
+G+LD+LVN A P+ + S F V +++ G F
Sbjct: 326 DEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARA 385
Query: 131 ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTD 190
A + S GG+I+N+ + A + A+KAAV ++RSLA EW
Sbjct: 386 AAR----------LMSQGGVIVNLGSIASLLALPPRNAYCASKAAVTMLSRSLACEWAP- 434
Query: 191 YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY-KFGEKWDIAMAALYLASDAGK 249
IRVN +APG I+ A ++ A + + G+ ++A A +LAS A
Sbjct: 435 AGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLASPAAS 494
Query: 250 YVNGNTLIVDGGNWLS 265
YVNG TL VDGG W +
Sbjct: 495 YVNGATLTVDGG-WTA 509
|
Length = 520 |
| >gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 1e-27
Identities = 76/256 (29%), Positives = 118/256 (46%), Gaps = 17/256 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GK L+TG GIGF ++ L ++GA I I AVA L GI A +
Sbjct: 7 LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFN 66
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V +++ +E G +D+L+N A P + + VI ++ F++
Sbjct: 67 VTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQ 126
Query: 130 EALKYLKKGGRGQASSSSGGIIINI----SATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
+Y+ K G+ IINI S T T Y +A+K AV +TR + +
Sbjct: 127 AVARYMVKRQAGK--------IINICSMQSELGRDTITPY----AASKGAVKMLTRGMCV 174
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
E + I+VNGIAPG K + + E + A ++G+ ++ AA++L+S
Sbjct: 175 ELAR-HNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSS 233
Query: 246 DAGKYVNGNTLIVDGG 261
A +VNG+ L VDGG
Sbjct: 234 KASDFVNGHLLFVDGG 249
|
Length = 254 |
| >gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR | Back alignment and domain information |
|---|
Score = 107 bits (268), Expect = 1e-27
Identities = 86/266 (32%), Positives = 119/266 (44%), Gaps = 22/266 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GK AL+TG GIG + + GA +AI L +A A +G A + D
Sbjct: 1 LDGKTALITGSARGIGRAFAQAYVREGARVAIADIN---LEAARATAAEIGPAACAISLD 57
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + R V + ++ +G +DILVN AA L P D++ + + I+ GT M
Sbjct: 58 VTDQASIDRCVAALVDRWGSIDILVNNAALFDLAPIVDITRESYDRLFAINVSGTLFMMQ 117
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ + GR GG IIN+++ A KAAV S+T+S L
Sbjct: 118 AVARAMIAQGR-------GGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNL-I 169
Query: 190 DYAIRVNGIAPGPIKDTA---GV-SKLAPEEIR---SKATDYMAAYKFGEKW---DIAMA 239
+ I VN IAPG + D GV +K A E R K A FG D+
Sbjct: 170 RHGINVNAIAPG-VVDGEHWDGVDAKFARYENRPRGEKKRLVGEAVPFGRMGRAEDLTGM 228
Query: 240 ALYLASDAGKYVNGNTLIVDGGNWLS 265
A++LAS Y+ T VDGGNW+S
Sbjct: 229 AIFLASTDADYIVAQTYNVDGGNWMS 254
|
This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254 |
| >gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 1e-27
Identities = 72/252 (28%), Positives = 120/252 (47%), Gaps = 9/252 (3%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L G+ AL+TG GIG+ ++ L + GA + + GR L +A +L G+ A L D
Sbjct: 8 LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFD 67
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + +++ G +DILVN A F P ED + F ++ + F +
Sbjct: 68 VTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQ 127
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+++ G G+ IINI++ A +A K AV ++T+ +A +W
Sbjct: 128 AVARHMIARGAGK--------IINIASVQSALARPGIAPYTATKGAVGNLTKGMATDWAK 179
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK 249
+ ++ N IAPG + +A E + A ++G+ ++ A ++LASDA
Sbjct: 180 -HGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVFLASDASS 238
Query: 250 YVNGNTLIVDGG 261
+VNG+ L VDGG
Sbjct: 239 FVNGHVLYVDGG 250
|
Length = 255 |
| >gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 2e-27
Identities = 80/262 (30%), Positives = 116/262 (44%), Gaps = 23/262 (8%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
GKVAL+TGG SGIG I+ +L GAA+ + + VA G A+G++ DV
Sbjct: 1 GKVALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEK-VAEAAQGGPRALGVQCDVT 59
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
E + FG LDI+V+ A P + S + ++I+ G F++ EA
Sbjct: 60 SEAQVQSAFEQAVLEFGGLDIVVSNAGIATSSPIAETSLEDWNRSMDINLTGHFLVSREA 119
Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYT---ATWYQIHVSAAKAAVDSITRSLALEWG 188
+ +K G G G I+ N S A Y SAAKAA + R LALE G
Sbjct: 120 FRIMKSQGIG------GNIVFNASKNAVAPGPNAAAY----SAAKAAEAHLARCLALEGG 169
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD-----YMAAYKFGEK---WDIAMAA 240
+ IRVN + P + + + + R+KA Y + D+A A
Sbjct: 170 -EDGIRVNTVNPDAVFRGSKIWEGVWRAARAKAYGLLEEEYRTRNLLKREVLPEDVAEAV 228
Query: 241 LYLASDAGKYVNGNTLIVDGGN 262
+ +AS+ G + VDGGN
Sbjct: 229 VAMASEDFGKTTGAIVTVDGGN 250
|
This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases | Back alignment and domain information |
|---|
Score = 105 bits (264), Expect = 5e-27
Identities = 67/258 (25%), Positives = 113/258 (43%), Gaps = 17/258 (6%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
KVAL+TGG GIG I+ +L K G A+A+ + + ++ G A+ + DV
Sbjct: 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD 60
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
++ ++ FG D++VN A + P +++ + V ++ G A
Sbjct: 61 KDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAA 120
Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
+ KK G GG IIN ++ + S+ K AV +T++ A E
Sbjct: 121 RQFKKQG-------HGGKIINAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQELAPKG- 172
Query: 193 IRVNGIAPGPIKDT------AGVSKLAPEEIRSKATDYMAAYKFG---EKWDIAMAALYL 243
I VN PG +K S++A + I ++ + G E D+A +L
Sbjct: 173 ITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFL 232
Query: 244 ASDAGKYVNGNTLIVDGG 261
AS+ Y+ G +++VDGG
Sbjct: 233 ASEDSDYITGQSILVDGG 250
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254 |
| >gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 105 bits (264), Expect = 6e-27
Identities = 80/269 (29%), Positives = 115/269 (42%), Gaps = 33/269 (12%)
Query: 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT----VLRSAVAALHSLGIPAIGL 66
KGKVAL+TG SGIG I+ L GA I + G +R+ +AA H G+ +
Sbjct: 1 KGKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKH--GVKVLYH 58
Query: 67 EGDVRKR---EDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
D+ K ED V + FG +DILVN A + P ED + +I ++
Sbjct: 59 GADLSKPAAIEDMVAYAQRQ---FGGVDILVNNAGIQHVAPIEDFPTEKWDAIIALNLSA 115
Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
F AL ++KK G G+ IINI++ A+ + AAK V +T+ +
Sbjct: 116 VFHTTRLALPHMKKQGWGR--------IINIASVHGLVASANKSAYVAAKHGVVGLTKVV 167
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY-----------KFGE 232
ALE + N I PG + T V K + A +F
Sbjct: 168 ALE-TAGTGVTCNAICPGWV-LTPLVEKQISALAQKNGVPQEQAARELLLEKQPSKQFVT 225
Query: 233 KWDIAMAALYLASDAGKYVNGNTLIVDGG 261
+ A++LASDA + G + VDGG
Sbjct: 226 PEQLGDTAVFLASDAASQITGTAVSVDGG 254
|
DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258 |
| >gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 105 bits (264), Expect = 7e-27
Identities = 66/257 (25%), Positives = 119/257 (46%), Gaps = 17/257 (6%)
Query: 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP-AIGLEGD 69
KV ++TGG GIG I ++GA + R + ++ + L+ G + D
Sbjct: 8 ADKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGSCKFVPCD 67
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
V K ED ++ T+ FG++D LVN A + ++ S FR ++ ++ + F+
Sbjct: 68 VTKEEDIKTLISVTVERFGRIDCLVNNAGWHPPHQTTDETSAQEFRDLLNLNLISYFLAS 127
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
AL +L+K S G IIN+S+ + A K A+ ++T++LA++
Sbjct: 128 KYALPHLRK---------SQGNIINLSSLVGSIGQKQAAPYVATKGAITAMTKALAVD-E 177
Query: 189 TDYAIRVNGIAPG----PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
+ Y +RVN I+PG P+ + + + G + + +AAL+LA
Sbjct: 178 SRYGVRVNCISPGNIWTPLWEELAAQTPDTLATIKEGELAQLLGRMGTEAESGLAALFLA 237
Query: 245 SDAGKYVNGNTLIVDGG 261
++A + G L++ GG
Sbjct: 238 AEA-TFCTGIDLLLSGG 253
|
These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261 |
| >gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 9e-27
Identities = 71/257 (27%), Positives = 126/257 (49%), Gaps = 13/257 (5%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR--KTVLRSAVAALHSLGIPAIGLEGDV 70
+VA++T SGIG +L L + G I I + +A + S G+ A + D+
Sbjct: 3 QVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETA-EEVRSHGVRAEIRQLDL 61
Query: 71 RKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
+ + ++ I G++D+LVN A P D+ + +R + +D G F+
Sbjct: 62 SDLPEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQI 121
Query: 131 ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTD 190
A +++ K G+ GG IINI++ +T +AAK A+ +T+++ALE +
Sbjct: 122 AARHMVKQGQ-------GGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALEL-VE 173
Query: 191 YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKY 250
+ I VN +APG I ++ + +++ + + + G+ +IA +L S+ Y
Sbjct: 174 HGILVNAVAPGAI--ATPMNGMDDSDVKPDSRPGIPLGRPGDTHEIASLVAWLCSEGASY 231
Query: 251 VNGNTLIVDGGNWLSNP 267
G +LIVDGG L+NP
Sbjct: 232 TTGQSLIVDGGFMLANP 248
|
Length = 256 |
| >gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 104 bits (262), Expect = 9e-27
Identities = 67/227 (29%), Positives = 107/227 (47%), Gaps = 23/227 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT------------VLRSAVAALH 57
L GKVA +TG GIG I+L+L K GA + + + + + +
Sbjct: 1 LSGKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIE 60
Query: 58 SLGIPAIGLEGDVRKREDAVR-VVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV 116
+ G A+ + DVR ED VR +VE+T++ FG+LDILVN A +L ED F +
Sbjct: 61 AAGGQALPIVVDVRD-EDQVRALVEATVDQFGRLDILVNNAGAIWLSLVEDTPAKRFDLM 119
Query: 117 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 176
++ GT+++ AL ++ K G+G I+NIS L + +A KA +
Sbjct: 120 QRVNLRGTYLLSQAALPHMVKAGQGH--------ILNISPPLSLRPARGDVAYAAGKAGM 171
Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD 223
+T LA E + I VN + P +T ++L+ ++A
Sbjct: 172 SRLTLGLAAELR-RHGIAVNSLWPSTAIETPAATELSGGSDPARARS 217
|
This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246 |
| >gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 1e-26
Identities = 73/255 (28%), Positives = 113/255 (44%), Gaps = 11/255 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+ GK+ L+TGG GIG I+ + GA + I R+ A L + G I + D
Sbjct: 4 VAGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELSAYG-ECIAIPAD 62
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ E +V +LD+LVN A + P E +G+ V++I+ F +
Sbjct: 63 LSSEEGIEALVARVAERSDRLDVLVNNAGATWGAPLEAFPESGWDKVMDINVKSVFFLTQ 122
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV-SAAKAAVDSITRSLALEWG 188
L L+ + + +INI + + + + A+KAAV +TR LA E
Sbjct: 123 ALLPLLRAAATAENPAR----VINIGSIAGIVVSGLENYSYGASKAAVHQLTRKLAKELA 178
Query: 189 TDYAIRVNGIAPGPI--KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
++ I VN IAPG K TA + + ++G D+A A+ LAS
Sbjct: 179 GEH-ITVNAIAPGRFPSKMTAFLLN--DPAALEAEEKSIPLGRWGRPEDMAGLAIMLASR 235
Query: 247 AGKYVNGNTLIVDGG 261
AG Y+ G + VDGG
Sbjct: 236 AGAYLTGAVIPVDGG 250
|
Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 103 bits (260), Expect = 2e-26
Identities = 75/264 (28%), Positives = 120/264 (45%), Gaps = 26/264 (9%)
Query: 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDV 70
GKV ++TG GIG ++L+ GA + ++ R + V A L + G A+ L D+
Sbjct: 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELV-HEVAAELRAAGGEALALTADL 65
Query: 71 RKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
A + + + FG++D+L+N G + P E+ I T C
Sbjct: 66 ETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCR 125
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
L ++ G GG I+N+S+ T ++ SAAK V+++T SLA E+
Sbjct: 126 AVLPHMLAQG--------GGAIVNVSSIA--TRGINRVPYSAAKGGVNALTASLAFEYA- 174
Query: 190 DYAIRVNGIAPG---------PIKDTAGVS---KLAPEEIRSKATDYMAAYKFGEKWDIA 237
++ IRVN +APG P ++ A S K ++I + D ++G +
Sbjct: 175 EHGIRVNAVAPGGTEAPPRRVP-RNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQV 233
Query: 238 MAALYLASDAGKYVNGNTLIVDGG 261
A L+LASD Y+ G L V GG
Sbjct: 234 AAILFLASDEASYITGTVLPVGGG 257
|
Length = 260 |
| >gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 3e-26
Identities = 83/260 (31%), Positives = 132/260 (50%), Gaps = 19/260 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GKVA++TG +G+G +++ L K GA I +G A + +LG + D
Sbjct: 6 LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVA--EAPETQAQVEALGRKFHFITAD 63
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL---SPNGFRTVIEIDSVGTFI 126
+ +++D +V + G +DIL+N A ++ +DL + VI I+ F
Sbjct: 64 LIQQKDIDSIVSQAVEVMGHIDILINNAG---IIRRQDLLEFGNKDWDDVININQKTVFF 120
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
+ K K G +GG IINI++ L + +A+K+AV +TR+LA E
Sbjct: 121 LSQAVAKQFVKQG-------NGGKIINIASMLSFQGGIRVPSYTASKSAVMGLTRALATE 173
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT-DYMAAYKFGEKWDIAMAALYLAS 245
+ Y I VN IAPG + T + L + R++A + + A ++G D+A A++L+S
Sbjct: 174 L-SQYNINVNAIAPGYMA-TDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFLSS 231
Query: 246 DAGKYVNGNTLIVDGGNWLS 265
A YV G TL VDGG WL+
Sbjct: 232 SASDYVTGYTLAVDGG-WLA 250
|
Length = 251 |
| >gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 4e-26
Identities = 81/270 (30%), Positives = 124/270 (45%), Gaps = 34/270 (12%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSAVAALHSLGIPAIGLEG 68
L GKVAL+TGG G+G I+ + GAA + I GR + A L +LG A+ ++
Sbjct: 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQA 63
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAA----GNFLVPAEDLSPNGFRTVIEIDSVGT 124
D+ ED RVV + FG+LD LVNAA G L D SP F ++
Sbjct: 64 DLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTIL----DTSPELFDRHFAVNVRAP 119
Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
F + EA+K +++ R G I+NI + + + A+K A+ ++TR+ A
Sbjct: 120 FFLMQEAIKLMRR--RKAE-----GTIVNIGSMSAHGGQPFLAAYCASKGALATLTRNAA 172
Query: 185 LEWGTDYA-----IRVNGIAPGPIKDTAGVSKL------APEEIRSKATDYMAAYKFGEK 233
YA IRVNG+ G + T G ++ AP++ KA + +
Sbjct: 173 ------YALLRNRIRVNGLNIGWM-ATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDP 225
Query: 234 WDIAMAALYLASDAGKYVNGNTLIVDGGNW 263
++A A +L SD + G+ + D W
Sbjct: 226 DEVARAVAFLLSDESGLMTGSVIDFDQSVW 255
|
Length = 260 |
| >gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 4e-26
Identities = 73/252 (28%), Positives = 109/252 (43%), Gaps = 21/252 (8%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG--IPAIGLEGD 69
GK L+TG SGIG ++ L + GA + R AAL L L D
Sbjct: 9 GKSVLVTGASSGIGRACAVALAQRGARVVAAAR-------NAAALDRLAGETGCEPLRLD 61
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + A+R + G D LVN A L A D++ GF V+ +++ G ++
Sbjct: 62 V-GDDAAIRAALAA---AGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVAR 117
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
R ++ GG I+N+S+ + A+KAA+D+ITR L +E G
Sbjct: 118 HV-------ARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVELG- 169
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK 249
+ IRVN + P + + + +F E D+A L+L SDA
Sbjct: 170 PHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDAAS 229
Query: 250 YVNGNTLIVDGG 261
V+G +L VDGG
Sbjct: 230 MVSGVSLPVDGG 241
|
Length = 245 |
| >gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 4e-26
Identities = 80/264 (30%), Positives = 119/264 (45%), Gaps = 29/264 (10%)
Query: 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHSL-GIPAIGLEG 68
KVAL+TGG IG I+ L G +AI R + A L++L A L+
Sbjct: 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQA 64
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
D+ + +V + + FG+LD LVN A+ + P ++ + + + F +
Sbjct: 65 DLLDPDALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLS 124
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATW----YQIHVSAAKAAVDSITRSLA 184
A L+K G I+NI +H A Y ++ AAKAA++ +TRSLA
Sbjct: 125 QAAAPQLRK---------QRGAIVNI-TDIH--AERPLKGYPVY-CAAKAALEMLTRSLA 171
Query: 185 LEWGTDYAIRVNGIAPGPI---KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241
LE + +RVN +APG I +D EE R + G DIA A
Sbjct: 172 LELAPE--VRVNAVAPGAILWPED----GNSFDEEARQAILARTPLKRIGTPEDIAEAVR 225
Query: 242 YLASDAGKYVNGNTLIVDGGNWLS 265
+L +DA ++ G L VDGG L+
Sbjct: 226 FLLADAS-FITGQILAVDGGRSLT 248
|
Length = 249 |
| >gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 4e-26
Identities = 71/255 (27%), Positives = 121/255 (47%), Gaps = 10/255 (3%)
Query: 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLE 67
D L KVAL+T GIG I+ +L + GA + + R++ + AVA L G+ G
Sbjct: 6 DPLANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGTV 65
Query: 68 GDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
V K ED R+V + +N G +DILV NAA F D + + +++++ T +
Sbjct: 66 CHVGKAEDRERLVATAVNLHGGVDILVSNAAVNPFFGNILDSTEEVWDKILDVNVKATAL 125
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
M + ++K G GG ++ +S+ + + +K A+ +T++LA E
Sbjct: 126 MTKAVVPEMEKRG--------GGSVVIVSSVAAFHPFPGLGPYNVSKTALLGLTKNLAPE 177
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
IRVN +APG IK + + + + + + + G+ D A +L S+
Sbjct: 178 LAPR-NIRVNCLAPGLIKTSFSSALWMDKAVEESMKETLRIRRLGQPEDCAGIVSFLCSE 236
Query: 247 AGKYVNGNTLIVDGG 261
Y+ G T++V GG
Sbjct: 237 DASYITGETVVVGGG 251
|
This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256 |
| >gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 1e-25
Identities = 69/255 (27%), Positives = 102/255 (40%), Gaps = 38/255 (14%)
Query: 22 SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVE 81
+ I + I+ + GA + + + AV L +PA + DV ED + E
Sbjct: 6 NSIAWAIAKAAAEEGAEVVLTTWPPALRMGAVDELAKE-LPADVIPLDVTSDEDIDELFE 64
Query: 82 STINHFGKLDILVNAAA----GNFLVPAEDLSPNGFRTVIEIDSVGTFI-MCHEALKYLK 136
GK+D LV++ A P D S GF ++I S +FI + A +
Sbjct: 65 KVKEDGGKIDFLVHSIAMSPEIRKGKPYLDTSREGFLKALDI-SAYSFISLAKAAKPLMN 123
Query: 137 KGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN 196
+GG A S + AKAA++S+ R LA E G IRVN
Sbjct: 124 EGGSIVALSYIAAE----------RVFPGYGGMGVAKAALESLARYLAYELG-RKGIRVN 172
Query: 197 GIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW----------DIAMAALYLASD 246
I+ GP K TAG S + ++ E+ ++A AA +L SD
Sbjct: 173 TISAGPTKTTAG----------SGIGGFDKMVEYAEEMAPLGRNASAEEVANAAAFLLSD 222
Query: 247 AGKYVNGNTLIVDGG 261
+ + G L VDGG
Sbjct: 223 LARGITGQILYVDGG 237
|
Length = 239 |
| >gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 101 bits (255), Expect = 1e-25
Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 10/196 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP-AIGLEG 68
L+GKV ++TG SGIG E++ L + GA + + RR+ L + LG P +
Sbjct: 1 LQGKVVIITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLELGAPSPHVVPL 60
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
D+ EDA +VVE + FG LDIL+N A + D S + R ++E++ G +
Sbjct: 61 DMSDLEDAEQVVEEALKLFGGLDILINNAGISMRSLFHDTSIDVDRKIMEVNYFGPVALT 120
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
AL +L + +G I+ +S+ ++ +A+K A+ SL E
Sbjct: 121 KAALPHLIERSQGS--------IVVVSSIAGKIGVPFRTAYAASKHALQGFFDSLRAEL- 171
Query: 189 TDYAIRVNGIAPGPIK 204
++ I V + PG I
Sbjct: 172 SEPNISVTVVCPGLID 187
|
Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 2e-25
Identities = 72/255 (28%), Positives = 114/255 (44%), Gaps = 13/255 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
GKVAL+TGG +GIG +L + GA + + R VA + G A+ + D
Sbjct: 5 FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACD 64
Query: 70 VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI-M 127
V + + +VE TI +G+LD NA + S F ++ ++ G ++ M
Sbjct: 65 VTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCM 124
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
++ L +G GG I+N ++ A +A+K AV +T+S A+E+
Sbjct: 125 KYQIPLMLAQG---------GGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEY 175
Query: 188 GTDYAIRVNGIAPGPIK-DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
IRVN + P I D + A A + G+ ++A A LYL SD
Sbjct: 176 AKK-GIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYLCSD 234
Query: 247 AGKYVNGNTLIVDGG 261
+ G+ L+VDGG
Sbjct: 235 GASFTTGHALMVDGG 249
|
Length = 253 |
| >gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 100 bits (252), Expect = 4e-25
Identities = 74/254 (29%), Positives = 126/254 (49%), Gaps = 12/254 (4%)
Query: 8 DILKGKVALLTGG-GSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAI- 64
+L GKV L+T G+GIG + + + GA + I + L L + LG+ +
Sbjct: 13 GLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVE 72
Query: 65 GLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT 124
+ DV ++++ + G+LD+LVN A P D++ + + V+++ GT
Sbjct: 73 AVVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGT 132
Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
F AL+Y++ RG GG+I+N ++ L + A Q H +AAKA V ++TR A
Sbjct: 133 FRATRAALRYMR--ARGH-----GGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTRCSA 185
Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
LE +Y +R+N +AP I ++K+ E+ + A + E W++A +LA
Sbjct: 186 LE-AAEYGVRINAVAPS-IAMHPFLAKVTSAELLDELAAREAFGRAAEPWEVANVIAFLA 243
Query: 245 SDAGKYVNGNTLIV 258
SD Y+ G + V
Sbjct: 244 SDYSSYLTGEVVSV 257
|
Length = 262 |
| >gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Score = 101 bits (252), Expect = 4e-25
Identities = 89/280 (31%), Positives = 137/280 (48%), Gaps = 41/280 (14%)
Query: 3 SPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP 62
S L GKVAL+TGG +GIG I KHGA + I+ + + ++ +L G P
Sbjct: 9 SSLPSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG--GEP 66
Query: 63 AIG-LEGDVRKREDAVRVVESTINHFGKLDILVNAA--AGNFLVPAEDLSPNGFRTVIEI 119
+ DV +D R V+ T++ FG LDI+VN A G ++ + F V ++
Sbjct: 67 NVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDV 126
Query: 120 DSVGTFI-MCHEA--LKYLKKG---GRGQASSSSGGIIINISATLHYTATWYQIHVSAAK 173
+ G F+ M H A + LKKG +S+ GG+ YT + K
Sbjct: 127 NVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGL-----GPHAYTGS---------K 172
Query: 174 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-FGE 232
AV +TRS+A E G + IRVN ++P + ++ L PE+ R++ D +A ++ F
Sbjct: 173 HAVLGLTRSVAAELG-KHGIRVNCVSPYAVPTALALAHL-PEDERTE--DALAGFRAFAG 228
Query: 233 KW-----------DIAMAALYLASDAGKYVNGNTLIVDGG 261
K D+A A L+LASD +Y++G L++DGG
Sbjct: 229 KNANLKGVELTVDDVANAVLFLASDEARYISGLNLMIDGG 268
|
Length = 280 |
| >gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 5e-25
Identities = 70/260 (26%), Positives = 128/260 (49%), Gaps = 26/260 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L G+VA++TGGGSGIG + +L GA + + ++A + L +P D
Sbjct: 5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPT-----D 59
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS-----PNGFRTVIEIDSVGT 124
V + + ++ +G +DI N A + P ED S + ++ V +++
Sbjct: 60 VTDEDAVNALFDTAAETYGSVDIAFNNAG---ISPPEDDSILNTGLDAWQRVQDVNLTSV 116
Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
++ C AL ++ + G+G +++ + + SAT QI +A+K V +++R L
Sbjct: 117 YLCCKAALPHMVRQGKGSIINTASFVAVMGSAT-------SQISYTASKGGVLAMSRELG 169
Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKL---APEEIRSKATDYMAAYKFGEKWDIAMAAL 241
+++ IRVN + PGP+ +T + +L PE + ++ +F E +IA A
Sbjct: 170 VQFARQ-GIRVNALCPGPV-NTPLLQELFAKDPERAARRLV-HVPMGRFAEPEEIAAAVA 226
Query: 242 YLASDAGKYVNGNTLIVDGG 261
+LASD ++ +T +VDGG
Sbjct: 227 FLASDDASFITASTFLVDGG 246
|
Length = 255 |
| >gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 99 bits (249), Expect = 7e-25
Identities = 72/263 (27%), Positives = 119/263 (45%), Gaps = 20/263 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GK A++TG SGIG EI+L+L + GAA+AI + + ++ G AIG+ D
Sbjct: 5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMD 64
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + ++ FG +DILV+ A + P E+ S ++ + I G F+
Sbjct: 65 VTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTK 124
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
ALK++ K R GG++I + + + A+ + AK + + R LA E G
Sbjct: 125 AALKHMYKDDR-------GGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKE-GA 176
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-----------FGEKWDIAM 238
+ +R + + PG ++ T V K PE+ + K F D+A
Sbjct: 177 KHNVRSHVVCPGFVR-TPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQ 235
Query: 239 AALYLASDAGKYVNGNTLIVDGG 261
L+L+S + G + +V G
Sbjct: 236 TVLFLSSFPSAALTGQSFVVSHG 258
|
Length = 262 |
| >gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 99.5 bits (248), Expect = 1e-24
Identities = 80/263 (30%), Positives = 126/263 (47%), Gaps = 22/263 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGL--- 66
K KV L+TGGGSG+G +++L K GA ++++ + L +A AAL + P +
Sbjct: 1 FKDKVVLITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEI-APDAEVLLI 59
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 125
+ DV V++T+ FG++D NA ED + F V+ I+ G F
Sbjct: 60 KADVSDEAQVEAYVDATVEQFGRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSINLRGVF 119
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
+ LK +++ G G I+N ++ Q +AAK V +TR+ A+
Sbjct: 120 YGLEKVLKVMREQGSGM--------IVNTASVGGIRGVGNQSGYAAAKHGVVGLTRNSAV 171
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVS----KLAPEEIRSKATDYMA---AYKFGEKWDIAM 238
E+G Y IR+N IAPG I T V +L PE ++++ +FGE ++A
Sbjct: 172 EYG-QYGIRINAIAPGAIL-TPMVEGSLKQLGPENPEEAGEEFVSVNPMKRFGEPEEVAA 229
Query: 239 AALYLASDAGKYVNGNTLIVDGG 261
+L SD YVN + +DGG
Sbjct: 230 VVAFLLSDDAGYVNAAVVPIDGG 252
|
Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 99.1 bits (247), Expect = 1e-24
Identities = 70/256 (27%), Positives = 107/256 (41%), Gaps = 16/256 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
GK AL+TG G GIG L K GA + + R + L S V + + D
Sbjct: 5 FAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVRECPGI----EPVCVD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ + E + G +D+LVN AA L P +++ F +++ +
Sbjct: 61 LSDWD----ATEEALGSVGPVDLLVNNAAVAILQPFLEVTKEAFDRSFDVNVRAVIHVSQ 116
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ + G G I+N+S+ A + KAA+D +T+ +ALE G
Sbjct: 117 IVARGMIARG-------VPGSIVNVSSQASQRALTNHTVYCSTKAALDMLTKVMALELGP 169
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK 249
+ IRVN + P + G + E K + + KF E D+ A L+L SD
Sbjct: 170 -HKIRVNSVNPTVVMTDMGRDNWSDPEKAKKMLNRIPLGKFAEVEDVVNAILFLLSDKSS 228
Query: 250 YVNGNTLIVDGGNWLS 265
G+TL VDGG S
Sbjct: 229 MTTGSTLPVDGGFLAS 244
|
Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244 |
| >gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 98.5 bits (246), Expect = 1e-24
Identities = 63/250 (25%), Positives = 101/250 (40%), Gaps = 17/250 (6%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVR 71
VAL+TG IG I+ L G + + R + + L++L A+ ++ D+
Sbjct: 1 AVALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDELNALRNSAVLVQADLS 60
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
+V + FG+ D+LVN A+ + P S + + + I+ +++
Sbjct: 61 DFAACADLVAAAFRAFGRCDVLVNNASAFYPTPLGQGSEDAWAELFGINLKAPYLLIQAF 120
Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
+ L G IINI + +KAA++ +TRS ALE +
Sbjct: 121 ARRLAGSRNGS--------IINIIDAMTDRPLTGYFAYCMSKAALEGLTRSAALELAPN- 171
Query: 192 AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYV 251
IRVNGIAPG I + E K +IA A ++L Y+
Sbjct: 172 -IRVNGIAPGLILLPEDMDAEYRENALRKVPLKRR----PSAEEIADAVIFLLDS--NYI 224
Query: 252 NGNTLIVDGG 261
G + VDGG
Sbjct: 225 TGQIIKVDGG 234
|
Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234 |
| >gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 98.7 bits (246), Expect = 2e-24
Identities = 77/257 (29%), Positives = 117/257 (45%), Gaps = 20/257 (7%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
KV ++TG GIG +L + G A+ + R + + V A+ G A+ + DV
Sbjct: 3 KVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVA 62
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPA---EDLSPNGFRTVIEIDSVGTFIMC 128
D +R+ E+ G+LD LVN A L E + + + VG+F+
Sbjct: 63 DEADVLRLFEAVDRELGRLDALVNNAG--ILEAQMRLEQMDAARLTRIFATNVVGSFLCA 120
Query: 129 HEALKYL--KKGGRGQASSSSGGIIINISATL-HYTATWYQIHVSAAKAAVDSITRSLAL 185
EA+K + + GGR GG I+N+S+ + I +A+K A+D++T LA
Sbjct: 121 REAVKRMSTRHGGR-------GGAIVNVSSMAARLGSPGEYIDYAASKGAIDTMTIGLAK 173
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI-RSKATDYMAAYKFGEKWDIAMAALYLA 244
E + IRVN + PG I S P + R KA M + G ++A A L+L
Sbjct: 174 EVAAE-GIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPMG--RGGTAEEVARAILWLL 230
Query: 245 SDAGKYVNGNTLIVDGG 261
SD Y G + V GG
Sbjct: 231 SDEASYTTGTFIDVSGG 247
|
Length = 248 |
| >gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 97.9 bits (244), Expect = 3e-24
Identities = 79/266 (29%), Positives = 119/266 (44%), Gaps = 39/266 (14%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
+ L+TGG G+G I+ + GA + + + +A A LG AI L+ DV
Sbjct: 6 QTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSE--DAAEALADELGDRAIALQADVTD 63
Query: 73 REDAVRVVESTINHFGK-LDILVNAAAGNFLV------PAEDLSPNGFRTVIEIDSVGTF 125
RE + + HFGK + +VN A +F A+D++ F+ +E G
Sbjct: 64 REQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGAL 123
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV------SAAKAAVDSI 179
AL +++ G G+ IINI L +Q V + AKAA+ +
Sbjct: 124 NTIQAALPGMREQGFGR--------IINIGTNL------FQNPVVPYHDYTTAKAALLGL 169
Query: 180 TRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA----YKFGEKWD 235
TR+LA E G Y I VN ++ G ++ T S P+E+ D +AA K +
Sbjct: 170 TRNLAAELG-PYGITVNMVSGGLLRTT-DASAATPDEV----FDLIAATTPLRKVTTPQE 223
Query: 236 IAMAALYLASDAGKYVNGNTLIVDGG 261
A A L+ AS + V G L+VDGG
Sbjct: 224 FADAVLFFASPWARAVTGQNLVVDGG 249
|
Length = 253 |
| >gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR | Back alignment and domain information |
|---|
Score = 97.6 bits (243), Expect = 4e-24
Identities = 82/255 (32%), Positives = 115/255 (45%), Gaps = 23/255 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+GKVAL+TG SGIG + L GAA+AI RR L + L + G A+ LE D
Sbjct: 1 LQGKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGKALVLELD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + VE T+ G+LDILVN A L P ED + +I+ + +G H
Sbjct: 61 VTDEQQVDAAVERTVEALGRLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYTTH 120
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
AL + + G I+NIS+ A +A K V++ + L E T
Sbjct: 121 AALPHHL--------LRNKGTIVNISSVAGRVAVRNSAVYNATKFGVNAFSEGLRQEV-T 171
Query: 190 DYAIRVNGIAPG----PIKD--TAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
+ +RV I PG ++D T ++K A EE S A DIA A Y
Sbjct: 172 ERGVRVVVIEPGTVDTELRDHITHTITKEAYEERISTIRKLQAE-------DIAAAVRY- 223
Query: 244 ASDAGKYVNGNTLIV 258
A A +V N +++
Sbjct: 224 AVTAPHHVTVNEILI 238
|
CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243 |
| >gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 97.3 bits (243), Expect = 9e-24
Identities = 75/260 (28%), Positives = 107/260 (41%), Gaps = 32/260 (12%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV---------LRSAVAALHSLG 60
L GK +TG GIG I+L+ + GA I I KT + +A + + G
Sbjct: 4 LSGKTLFITGASRGIGLAIALRAARDGANIVIAA--KTAEPHPKLPGTIHTAAEEIEAAG 61
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
A+ L GDVR + V + FG +DI VN A+ L ED F + +I+
Sbjct: 62 GQALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQIN 121
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS--AAKAAVDS 178
GTF++ L +LKK S I+ +S L+ W+ H + AK +
Sbjct: 122 VRGTFLVSQACLPHLKK--------SENPHILTLSPPLNLDPKWFAPHTAYTMAKYGMSL 173
Query: 179 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI-A 237
T LA E+ D I VN + P TA V L + A + +I A
Sbjct: 174 CTLGLAEEFR-DDGIAVNALWPRTTIATAAVRNLLGGD---------EAMRRSRTPEIMA 223
Query: 238 MAALYLASDAGKYVNGNTLI 257
AA + S + GN LI
Sbjct: 224 DAAYEILSRPAREFTGNFLI 243
|
Length = 273 |
| >gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 96.8 bits (241), Expect = 9e-24
Identities = 79/253 (31%), Positives = 121/253 (47%), Gaps = 4/253 (1%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+GKVAL+TG SG+G + L + GA + + RR L+ A + + G A + D
Sbjct: 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLD 66
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + V G +DILVN + + D++P F V + ++ G F +
Sbjct: 67 VTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQ 126
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV-SAAKAAVDSITRSLALEWG 188
E K + +G ++ GG IINI A++ QI + +KAAV +TR++ALEWG
Sbjct: 127 EVAKRMIARAKGAGNTKPGGRIINI-ASVAGLRVLPQIGLYCMSKAAVVHMTRAMALEWG 185
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
+ I VN I PG I DT E K + + G+ D+ L LA+D
Sbjct: 186 R-HGINVNAICPGYI-DTEINHHHWETEQGQKLVSMLPRKRVGKPEDLDGLLLLLAADES 243
Query: 249 KYVNGNTLIVDGG 261
+++NG + D G
Sbjct: 244 QFINGAIISADDG 256
|
Length = 258 |
| >gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 96.6 bits (241), Expect = 1e-23
Identities = 72/265 (27%), Positives = 107/265 (40%), Gaps = 21/265 (7%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEGDVR 71
VAL+TGG GIG I+ L G +AI R L + L +LG+ I DV
Sbjct: 3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVA 62
Query: 72 KREDAVRVVESTINHFGKLDILVNAAA------GNFLVPAEDLSPNGFRTVIEIDSVGTF 125
++++ +G++D LVN A G+ L DL+P F V+ I+ G F
Sbjct: 63 DLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLL----DLTPESFDRVLAINLRGPF 118
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
+ K + + I+ +S+ + + +KA + + A
Sbjct: 119 FLTQAVAKRMLAQPEPEELPH--RSIVFVSSVNAIMVSPNRGEYCISKAGLSMAAQLFAA 176
Query: 186 EWGTDYAIRVNGIAPGPIKD--TAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
+ I V + PG IK TA V+ I ++GE D+A A L
Sbjct: 177 RLA-EEGIGVYEVRPGLIKTDMTAPVTAKYDALIAKGLV---PMPRWGEPEDVARAVAAL 232
Query: 244 ASDAGKYVNGNTLIVDGGNWLSNPR 268
AS Y G + VDGG LS PR
Sbjct: 233 ASGDLPYSTGQAIHVDGG--LSIPR 255
|
Length = 256 |
| >gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 96.2 bits (240), Expect = 2e-23
Identities = 82/263 (31%), Positives = 117/263 (44%), Gaps = 29/263 (11%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LK KV ++TGG SGIG ISL+L + GA I GR A L +L A ++ D
Sbjct: 5 LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFA-EELRALQPRAEFVQVD 63
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ VE T+ FG++D LVN A N V E F +E + + ++M H
Sbjct: 64 LTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEA-GREAFVASLERNLIHYYVMAH 122
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS---AAKAAVDSITRSLALE 186
L +LK S G I+NIS+ TA Q S AAK A ++TR E
Sbjct: 123 YCLPHLKA---------SRGAIVNISSK---TALTGQGGTSGYAAAKGAQLALTR----E 166
Query: 187 WGTD---YAIRVNGIAPG----PIKDTAGVSKLAPEEIRSKATDYMA-AYKFGEKWDIAM 238
W +RVN + P P+ + + PE + T + ++ +IA
Sbjct: 167 WAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIAD 226
Query: 239 AALYLASDAGKYVNGNTLIVDGG 261
A++L S+ + G L VDGG
Sbjct: 227 TAVFLLSERSSHTTGQWLFVDGG 249
|
Length = 258 |
| >gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR | Back alignment and domain information |
|---|
Score = 95.0 bits (237), Expect = 4e-23
Identities = 73/274 (26%), Positives = 110/274 (40%), Gaps = 53/274 (19%)
Query: 12 GKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
GK L+TG + I + I+ L + GA +A + + + + LG A+ L D
Sbjct: 1 GKRILITGIANDRSIAWGIAKALHEAGAELAFTYQPEALRKRVEKLAERLGESALVLPCD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRTVIEIDS 121
V E+ + +GKLD LV++ A G FL D S GF ++I +
Sbjct: 61 VSNDEEIKELFAEVKKDWGKLDGLVHSIAFAPKVQLKGPFL----DTSRKGFLKALDISA 116
Query: 122 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH----VSAAKAAVD 177
+ AL + G G I+ TL Y + + + AKAA++
Sbjct: 117 YSLVSLAKAALPIMNPG---------GSIV-----TLSYLGSERVVPGYNVMGVAKAALE 162
Query: 178 SITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW--- 234
S R LA E G IRVN I+ GPIK A S T + ++ E+
Sbjct: 163 SSVRYLAYELG-RKGIRVNAISAGPIKTLAA----------SGITGFDKMLEYSEQRAPL 211
Query: 235 -------DIAMAALYLASDAGKYVNGNTLIVDGG 261
++ A +L SD + G + VDGG
Sbjct: 212 GRNVTAEEVGNTAAFLLSDLSSGITGEIIYVDGG 245
|
This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 96.5 bits (241), Expect = 4e-23
Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 8/177 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+ +V ++TG +G+G + + GA + ++ R + L + A + + G A+ + D
Sbjct: 6 IGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVAD 65
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V E + G +D VN A P ED++P FR V E+ +G
Sbjct: 66 VADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTL 125
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
AL++++ R G II + + L Y + Q AAK A+ T SL E
Sbjct: 126 AALRHMRPRDR--------GAIIQVGSALAYRSIPLQSAYCAAKHAIRGFTDSLRCE 174
|
Length = 334 |
| >gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 95.0 bits (237), Expect = 4e-23
Identities = 75/279 (26%), Positives = 115/279 (41%), Gaps = 53/279 (18%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L G+VAL+TGGGSGIG + + GA +A++ R L +++ + + EGD
Sbjct: 4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKL-ASLRQRFGDHVLVV--EGD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPN----GFRTVIEIDSVGT 124
V D R V+ T++ FGKLD V NA ++ D+ F + ++ G
Sbjct: 61 VTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGY 120
Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
+ AL LK G G +I +S + Y ++ A+K AV + R LA
Sbjct: 121 LLGAKAALPALKASG--------GSMIFTLSNSSFYPGGGGPLYT-ASKHAVVGLVRQLA 171
Query: 185 LEWGTDYAIRVNGIAPG-----------------PIKDTAG----VSKLAPEEIRSKATD 223
E IRVNG+APG I D+ G ++ + P + + D
Sbjct: 172 YELAPK--IRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPED 229
Query: 224 YMAAYKFGEKWDIAMAALYLASDA-GKYVNGNTLIVDGG 261
+ Y LAS + + G + DGG
Sbjct: 230 HTGPYVL------------LASRRNSRALTGVVINADGG 256
|
Length = 263 |
| >gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 95.3 bits (237), Expect = 5e-23
Identities = 68/264 (25%), Positives = 119/264 (45%), Gaps = 36/264 (13%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LK KVA++TGG GIG + +L + G+ + ++ S + + D
Sbjct: 4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKE---PSYNDVDY--------FKVD 52
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V +E ++ ++ I+ +G++DILVN A + + + +I ++ G F+M
Sbjct: 53 VSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSK 112
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ Y+ K G+IINI++ + T +K AV +TRS+A+
Sbjct: 113 YTIPYMLKQD--------KGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAV---- 160
Query: 190 DYA--IRVNGIAPGPIKDTAGVSKLA-------PEEIRSKATDYMAAY---KFGEKWDIA 237
DYA IR + PG I T + A PE + K ++ + + G+ ++A
Sbjct: 161 DYAPTIRCVAVCPGSI-RTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVA 219
Query: 238 MAALYLASDAGKYVNGNTLIVDGG 261
+LASD ++ G + VDGG
Sbjct: 220 YVVAFLASDLASFITGECVTVDGG 243
|
Length = 258 |
| >gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 94.9 bits (236), Expect = 7e-23
Identities = 72/265 (27%), Positives = 116/265 (43%), Gaps = 23/265 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GK AL+TG GIG I+ +HGA + ++ + + A L G + D
Sbjct: 4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLA-DELCGRGHRCTAVVAD 62
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
VR ++ G++DILVN A L D+S I+I+ G + +
Sbjct: 63 VRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTK 122
Query: 130 EALKYLKKGGRGQ---ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
L + G+ SS +G ++ + T + KAA+ +T+SLA+E
Sbjct: 123 AVLPEMIARKDGRIVMMSSVTGDMVADPGETAYAL----------TKAAIVGLTKSLAVE 172
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLA----PEEIRSKATDYMAAY---KFGEKWDIAMA 239
+ IRVN I PG ++ T +A PE+ S T+ A + + ++
Sbjct: 173 YA-QSGIRVNAICPGYVR-TPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGEL 230
Query: 240 ALYLASDAGKYVNGNTLIVDGGNWL 264
A +LASD Y+ G ++DGG+ L
Sbjct: 231 AAFLASDESSYLTGTQNVIDGGSTL 255
|
Length = 263 |
| >gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 94.5 bits (235), Expect = 8e-23
Identities = 75/265 (28%), Positives = 118/265 (44%), Gaps = 24/265 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+GKV ++TG GIG ++ +L GA + ++ R + V +A + + G A D
Sbjct: 2 FEGKVVVVTGAAQGIGRGVAERLAGEGARVLLVDRSELVH-EVLAEILAAGDAAHVHTAD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLV-PAEDLSPNGFRTVIEIDSVGTFIMC 128
+ A VV + + FG++D+L+N G P E I T C
Sbjct: 61 LETYAGAQGVVRAAVERFGRVDVLINNVGGTIWAKPYEHYEEEQIEAEIRRSLFPTLWCC 120
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
L ++ + R Q G+I+N+S+ T Y+I SAAK V+++T SLA E
Sbjct: 121 RAVLPHMLE--RQQ------GVIVNVSSIA--TRGIYRIPYSAAKGGVNALTASLAFEHA 170
Query: 189 TDYAIRVNGIAPGP--------IKDTAGVSKLAPE---EIRSKATDYMAAYKFGEKWDIA 237
IRVN +APG ++ A +S+ I + D ++G +
Sbjct: 171 -RDGIRVNAVAPGGTEAPPRKIPRNAAPMSEQEKVWYQRIVDQTLDSSLMGRYGTIDEQV 229
Query: 238 MAALYLASDAGKYVNGNTLIVDGGN 262
A L+LASD Y+ G L V GG+
Sbjct: 230 RAILFLASDEASYITGTVLPVGGGD 254
|
DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256 |
| >gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 94.0 bits (234), Expect = 1e-22
Identities = 78/267 (29%), Positives = 116/267 (43%), Gaps = 30/267 (11%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LKG+VAL+TGGGSG+G + + GA +A++ R + + + A G +G+EGD
Sbjct: 2 LKGEVALITGGGSGLGRALVERFVAEGAKVAVLDRSAEKV-AELRADF--GDAVVGVEGD 58
Query: 70 VRKREDAVRVVESTINHFGKLDILV-NAAAGNFL-----VPAEDLSPNGFRTVIEIDSVG 123
VR D R V + FGKLD + NA ++ +P E L F + I+ G
Sbjct: 59 VRSLADNERAVARCVERFGKLDCFIGNAGIWDYSTSLVDIPEEKLDE-AFDELFHINVKG 117
Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
+ AL L + G +I +S Y ++ A+K AV + + L
Sbjct: 118 YILGAKAALPALYA--------TEGSVIFTVSNAGFYPGGGGPLYT-ASKHAVVGLVKQL 168
Query: 184 ALEWGTDYAIRVNGIAPGPI-KDTAGVSKLAPEEIRSKAT---DYMAAY----KFGEKWD 235
A E IRVNG+APG + D G + L E D + + E D
Sbjct: 169 AYELAPH--IRVNGVAPGGMVTDLRGPASLGQGETSISTPPLDDMLKSILPLGFAPEPED 226
Query: 236 IAMAALYLAS-DAGKYVNGNTLIVDGG 261
A ++LAS + G + DGG
Sbjct: 227 YTGAYVFLASRGDNRPATGTVINYDGG 253
|
cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 93.4 bits (232), Expect = 1e-22
Identities = 70/250 (28%), Positives = 110/250 (44%), Gaps = 15/250 (6%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
GKVA++TGGG GIG +I L + G + + R A A + G + GDV
Sbjct: 1 GKVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEE--RGADFA-EAEGPNLFFVHGDVA 57
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
VV + + G++D+LVN AA L + ++ ++ G + +
Sbjct: 58 DETLVKFVVYAMLEKLGRIDVLVNNAARGSKGILSSLLLEEWDRILSVNLTGPYELSRYC 117
Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
L K G IINI++T + + +A+K + ++T +LA+ G D
Sbjct: 118 RDELIKN---------KGRIINIASTRAFQSEPDSEAYAASKGGLVALTHALAMSLGPD- 167
Query: 192 AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYV 251
IRVN I+PG I +T + + + A + G DIA L+L ++
Sbjct: 168 -IRVNCISPGWI-NTTEQQEFTAAPLTQEDHAQHPAGRVGTPKDIANLVLFLCQQDAGFI 225
Query: 252 NGNTLIVDGG 261
G T IVDGG
Sbjct: 226 TGETFIVDGG 235
|
This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242 |
| >gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 93.1 bits (232), Expect = 1e-22
Identities = 60/194 (30%), Positives = 86/194 (44%), Gaps = 15/194 (7%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVL-RSAVAALHSLGIPAIGLEGDVR 71
KVAL+TG GIGFEI QL K G I+ R ++AV L + G+ + DV
Sbjct: 1 KVALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVRFHQLDVT 60
Query: 72 KREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
+ +G LDILV NA + R ++ + GT +
Sbjct: 61 DDASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTPTREQARETMKTNFFGTVDVTQA 120
Query: 131 ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTD 190
L LKK S G I+N+S+ L + Y +KAA++++TR LA E +
Sbjct: 121 LLPLLKK--------SPAGRIVNVSSGLGSLTSAYG----VSKAALNALTRILAKEL-KE 167
Query: 191 YAIRVNGIAPGPIK 204
I+VN PG +K
Sbjct: 168 TGIKVNACCPGWVK 181
|
PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225 |
| >gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 93.7 bits (233), Expect = 2e-22
Identities = 79/268 (29%), Positives = 128/268 (47%), Gaps = 20/268 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLE- 67
+ + L+TGGGSGIG ++ L GAA+ I+GR L +A + +L G A+ E
Sbjct: 5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEP 64
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV-PAEDLSPNGFRTVIEIDSVGTFI 126
DV + R V++ G+L +V+ A G+ + P + + +R ++++ GT
Sbjct: 65 ADVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMY 124
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISA-TLHYTATWYQIHVSAAKAAVDSITRSLAL 185
+ A + L +GG GG + IS+ T W+ + K+AVD + + A
Sbjct: 125 VLKHAARELVRGG--------GGSFVGISSIAASNTHRWFGAY-GVTKSAVDHLMKLAAD 175
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY---KFGEKWDIAMAALY 242
E G + +RVN I PG I+ E+ + DY A + GE D+A A++
Sbjct: 176 ELGPSW-VRVNSIRPGLIRTDLVAPITESPELSA---DYRACTPLPRVGEVEDVANLAMF 231
Query: 243 LASDAGKYVNGNTLIVDGGNWLSNPRDL 270
L SDA ++ G + VDGG+ L D
Sbjct: 232 LLSDAASWITGQVINVDGGHMLRRGPDF 259
|
Length = 276 |
| >gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 92.9 bits (231), Expect = 3e-22
Identities = 74/256 (28%), Positives = 113/256 (44%), Gaps = 19/256 (7%)
Query: 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVA----ALHSLGIPAIGLEGDV 70
A +TG G+G I+ ++ + GA + + A A A H G+ A DV
Sbjct: 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGV-AFAAVQDV 60
Query: 71 RKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
++ + G L +LVN A E + + +R V+ I+ F+ C
Sbjct: 61 TDEAQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKH 120
Query: 131 ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG-T 189
AL YL+ I+NIS+ + A +A+KAAV S+T+S+AL+
Sbjct: 121 ALPYLRASQPAS--------IVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCARR 172
Query: 190 DYAIRVNGIAPGPIKDT---AGVSK-LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
+R N I P I T + + L EE K + + GE D+A A LYLAS
Sbjct: 173 GLDVRCNSIHPTFI-RTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLAS 231
Query: 246 DAGKYVNGNTLIVDGG 261
D ++V G L++DGG
Sbjct: 232 DESRFVTGAELVIDGG 247
|
Length = 251 |
| >gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 92.5 bits (230), Expect = 3e-22
Identities = 71/265 (26%), Positives = 109/265 (41%), Gaps = 41/265 (15%)
Query: 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDV 70
GKVAL+T GIG I+L + GA + + L+ GI L DV
Sbjct: 1 DGKVALITAAAQGIGRAIALAFAREGANVIATDINEEKLKELER---GPGITTRVL--DV 55
Query: 71 RKREDAVRVVESTINHFGKLDILVNAAA----GNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
+E V + G++D+L N A G+ L D + + + ++ ++
Sbjct: 56 TDKEQ----VAALAKEEGRIDVLFNCAGFVHHGSIL----DCEDDDWDFAMNLNVRSMYL 107
Query: 127 MCHEAL-KYLKKGGRGQASSSSGGIIINI-SATLHYTATWYQIHVSAAKAAVDSITRSLA 184
M L K L + G IIN+ S + S KAAV +T+S+A
Sbjct: 108 MIKAVLPKMLARKD---------GSIINMSSVASSIKGVPNRFVYSTTKAAVIGLTKSVA 158
Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYMAAY---KFGEKWDI 236
++ IR N I PG + DT + + PEE + A + ++
Sbjct: 159 ADF-AQQGIRCNAICPGTV-DTPSLEERIQAQPDPEEAL---KAFAARQPLGRLATPEEV 213
Query: 237 AMAALYLASDAGKYVNGNTLIVDGG 261
A A+YLASD YV G +++DGG
Sbjct: 214 AALAVYLASDESAYVTGTAVVIDGG 238
|
Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241 |
| >gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 92.8 bits (231), Expect = 3e-22
Identities = 69/264 (26%), Positives = 111/264 (42%), Gaps = 21/264 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA--IGLE 67
L+G+VA++TGG SGIG L + GA++AI GR + L SA A L A +
Sbjct: 6 LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAAR 65
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
DV D + FG +D+LVN A + D + + +R +E+
Sbjct: 66 CDVLDEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINP 125
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
L L+ S+ I+ +++ L + + SAA+A + ++ +SLA E
Sbjct: 126 TRAFLPLLRA--------SAAASIVCVNSLLALQPEPHMVATSAARAGLLNLVKSLATEL 177
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA----TDYMAAYK------FGEKWDIA 237
+RVN I G ++ + ++ T +A K G + A
Sbjct: 178 -APKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAA 236
Query: 238 MAALYLASDAGKYVNGNTLIVDGG 261
A +LAS Y G+ + V GG
Sbjct: 237 RALFFLASPLSSYTTGSHIDVSGG 260
|
Length = 265 |
| >gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Score = 92.1 bits (229), Expect = 4e-22
Identities = 72/252 (28%), Positives = 112/252 (44%), Gaps = 16/252 (6%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA---IGLEGD 69
++AL+TGG GIG I +L K G +A A A L G +EGD
Sbjct: 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNE--ERAEAWLQEQGALGFDFRVVEGD 58
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V E V G +D+LVN A + ++ + VI+ + F +
Sbjct: 59 VSSFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQ 118
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ +++ G G+ IINIS+ + Q + SAAKA + T++LA E G
Sbjct: 119 PVIDGMRERGWGR--------IINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQE-GA 169
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK 249
+ VN I+PG I T V + E++ + + + G +IA A +LAS+
Sbjct: 170 TKGVTVNTISPGYI-ATDMVMAM-REDVLNSIVAQIPVGRLGRPEEIAAAVAFLASEEAG 227
Query: 250 YVNGNTLIVDGG 261
Y+ G TL ++GG
Sbjct: 228 YITGATLSINGG 239
|
This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242 |
| >gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 92.0 bits (228), Expect = 5e-22
Identities = 72/255 (28%), Positives = 120/255 (47%), Gaps = 15/255 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GK AL+TG +GIG ++L + GA +AI R L + + G + + D
Sbjct: 7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCD 66
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + + +++ G +DI V A + P D+ F+ + + G F+
Sbjct: 67 VSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQ 126
Query: 130 EALKYLKKGGRGQA---SSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
A K + K G+G ++S G IIN+ + H A+KAAV +T+++A+E
Sbjct: 127 AAAKAMVKQGQGGVIINTASMSGHIINVPQQVS--------HYCASKAAVIHLTKAMAVE 178
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
+ IRVN ++PG I T V E + + + G ++A LYLAS+
Sbjct: 179 LAP-HKIRVNSVSPGYIL-TELVEPYT--EYQPLWEPKIPLGRLGRPEELAGLYLYLASE 234
Query: 247 AGKYVNGNTLIVDGG 261
A Y+ G+ +++DGG
Sbjct: 235 ASSYMTGSDIVIDGG 249
|
Length = 253 |
| >gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 91.2 bits (226), Expect = 1e-21
Identities = 80/262 (30%), Positives = 121/262 (46%), Gaps = 24/262 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEG 68
L GKVAL+TG GIG I+++L GA +AI GR K + + S G A +E
Sbjct: 4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEA 63
Query: 69 DVRKREDAVRVVESTINHF------GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 122
D+ + ++VE N ++DILVN A E+ + F ++ ++
Sbjct: 64 DLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIK 123
Query: 123 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT---LHYTATWYQIHVSAAKAAVDSI 179
F + + L L+ GR +INIS+ L +T + I +K A++++
Sbjct: 124 APFFLIQQTLPLLRAEGR----------VINISSAEVRLGFTGS---IAYGLSKGALNTM 170
Query: 180 TRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239
T LA G + I VN I PG K L EIR+ AT+ + G+ DIA A
Sbjct: 171 TLPLAKHLG-ERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADA 229
Query: 240 ALYLASDAGKYVNGNTLIVDGG 261
+LAS ++V G + V GG
Sbjct: 230 VAFLASSDSRWVTGQIIDVSGG 251
|
Length = 254 |
| >gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 91.2 bits (227), Expect = 1e-21
Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
GKV ++TG GIG ++++L + GA + + R +T L S L G A+ + DV
Sbjct: 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVS 60
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS-PNGFRTVIEIDSVGTFIMCHE 130
E R++E+ + FG +DILVN A ++L+ + F V+ ++ +G H
Sbjct: 61 DAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHA 120
Query: 131 ALKYLKKGGRGQ--ASSSSGGII 151
AL +LK RGQ SS G+
Sbjct: 121 ALPHLKA-SRGQIVVVSSLAGLT 142
|
Length = 263 |
| >gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 90.1 bits (224), Expect = 2e-21
Identities = 55/195 (28%), Positives = 89/195 (45%), Gaps = 17/195 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+GK AL+TG G GIG +++ L K G + ++ R + L++ + + G+ + D
Sbjct: 5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATAD 64
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAA----GNFLVPAEDLSPNGFRTVIEIDSVGTF 125
V E+ +E N G +DIL+N A G FL +L P + +I+++ +G +
Sbjct: 65 VSDYEEVTAAIEQLKNELGSIDILINNAGISKFGKFL----ELDPAEWEKIIQVNLMGVY 120
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
L + + G IINIS+T SA+K V +T SL
Sbjct: 121 YATRAVLPSMIERQSGD--------IINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQ 172
Query: 186 EWGTDYAIRVNGIAP 200
E + IRV + P
Sbjct: 173 EV-RKHNIRVTALTP 186
|
Length = 239 |
| >gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Score = 90.0 bits (224), Expect = 3e-21
Identities = 58/215 (26%), Positives = 95/215 (44%), Gaps = 16/215 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEG 68
+KGK AL+TG SGIG E++ QL + G + ++ RR+ L + L G+ +
Sbjct: 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPA 63
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
D+ E R+ + G +D+LVN A P +LS + +I+++ + +
Sbjct: 64 DLSDPEALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLT 123
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
L + + G G IINI + T Y SA KA V S + +L E
Sbjct: 124 KAVLPGMVERGAGH--------IINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELK 175
Query: 189 TDYAIRVNGIAPGPIK------DTAGVSKLAPEEI 217
++V + PGP + + V L+P E+
Sbjct: 176 -GTGVKVTAVCPGPTRTEFFDAKGSDVYLLSPGEL 209
|
Length = 265 |
| >gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 92.6 bits (230), Expect = 5e-21
Identities = 74/276 (26%), Positives = 117/276 (42%), Gaps = 28/276 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL---HSLGIPAIGL 66
L +VA +TGG GIG E + +L GA + + + A + G A+ L
Sbjct: 412 LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGR-AVAL 470
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
+ DV + +G +DI+VN A P E+ + ++ ++I + G F+
Sbjct: 471 KMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFL 530
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
+ EA + +++ G GG I+ I++ A SAAKAA + R LA E
Sbjct: 531 VAREAFRQMREQG-------LGGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARCLAAE 583
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY-MAAYKFGEKW----------- 234
G Y IRVN + P + +G+ E +A Y + A + E +
Sbjct: 584 -GGTYGIRVNTVNPDAVLQGSGI--WDGEWREERAAAYGIPADELEEHYAKRTLLKRHIF 640
Query: 235 --DIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPR 268
DIA A +LAS + G + VDGG + R
Sbjct: 641 PADIAEAVFFLASSKSEKTTGCIITVDGGVPAAFLR 676
|
Length = 676 |
| >gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 89.3 bits (222), Expect = 6e-21
Identities = 67/264 (25%), Positives = 107/264 (40%), Gaps = 30/264 (11%)
Query: 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDV 70
KG VA++TGG SG+G +L GA + I+ S + LG + DV
Sbjct: 1 KGLVAVVTGGASGLGLATVERLLAQGAKVVILDLPN----SPGETVAKLGDNCRFVPVDV 56
Query: 71 RKREDAVRVVESTINHFGKLDILVNAAA-----------GNFLVPAEDLSPNGFRTVIEI 119
+D + FG+LDI+VN A G E F+ VI +
Sbjct: 57 TSEKDVKAALALAKAKFGRLDIVVNCAGIAVAAKTYNKKGQQPHSLEL-----FQRVINV 111
Query: 120 DSVGTFIMCHEALKYLKKGGRGQASSSSG--GIIINISATLHYTATWYQIHVSAAKAAVD 177
+ +GTF + A + K G G+IIN ++ + Q SA+K +
Sbjct: 112 NLIGTFNVIRLAAGAMGK----NEPDQGGERGVIINTASVAAFEGQIGQAAYSASKGGIV 167
Query: 178 SITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA 237
+T +A + IRV IAPG + DT ++ L + A + G+ + A
Sbjct: 168 GMTLPIARDLAPQ-GIRVVTIAPG-LFDTPLLAGLPEKVRDFLAKQVPFPSRLGDPAEYA 225
Query: 238 MAALYLASDAGKYVNGNTLIVDGG 261
++ + Y+NG + +DG
Sbjct: 226 HLVQHIIEN--PYLNGEVIRLDGA 247
|
HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252 |
| >gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Score = 89.1 bits (221), Expect = 6e-21
Identities = 72/267 (26%), Positives = 106/267 (39%), Gaps = 46/267 (17%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
K+AL+TG GIG I+ +L G +A S A +
Sbjct: 3 KIALVTGAKRGIGSAIARELLNDG-------------YRVIATYFSGNDCAKDWFEEYGF 49
Query: 73 REDAVRVVESTINHF--------------GKLDILVNAAA----GNFLVPAEDLSPNGFR 114
ED VR+ E + G +DILVN A F +S +
Sbjct: 50 TEDQVRLKELDVTDTEECAEALAEIEEEEGPVDILVNNAGITRDSVFK----RMSHQEWN 105
Query: 115 TVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKA 174
VI + F + + + G G IINIS+ + Q + SAAKA
Sbjct: 106 DVINTNLNSVFNVTQPLFAAMCEQG--------YGRIINISSVNGLKGQFGQTNYSAAKA 157
Query: 175 AVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW 234
+ T++LA E G Y I VN IAPG I T V + E+ + + + G
Sbjct: 158 GMIGFTKALASE-GARYGITVNCIAPGYIA-TPMVEQ-MGPEVLQSIVNQIPMKRLGTPE 214
Query: 235 DIAMAALYLASDAGKYVNGNTLIVDGG 261
+IA A +L S+A ++ G T+ ++GG
Sbjct: 215 EIAAAVAFLVSEAAGFITGETISINGG 241
|
Length = 245 |
| >gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR | Back alignment and domain information |
|---|
Score = 88.5 bits (220), Expect = 7e-21
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 30/210 (14%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA----IGLE 67
GK L+TGG SGIG ++ +L K GA + I+ R ++ L AV + + + +
Sbjct: 1 GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYIS 60
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA--EDLSPNGFRTVIEIDSVGTF 125
D+ E+ + + G D++VN A +P EDL+ F ++++ G+
Sbjct: 61 ADLSDYEEVEQAFAQAVEKGGPPDLVVNCAG--ISIPGLFEDLTAEEFERGMDVNYFGSL 118
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATL------HYTATWYQIHVSAAKAAVDSI 179
+ H L +K+ G I+ +S+ Y+A Y +K A+ +
Sbjct: 119 NVAHAVLPLMKEQRPGH--------IVFVSSQAALVGIYGYSA--Y----CPSKFALRGL 164
Query: 180 TRSLALEWGTDYAIRVNGIAPGPIKDTAGV 209
SL E Y IRV+ + P DT G
Sbjct: 165 AESLRQEL-KPYNIRVSVVYPPDT-DTPGF 192
|
These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239 |
| >gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 89.5 bits (222), Expect = 8e-21
Identities = 76/264 (28%), Positives = 119/264 (45%), Gaps = 28/264 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+ KVA++TG +GIG ++ L + GA + + + V + S G A D
Sbjct: 4 LENKVAVITGASTGIGQASAIALAQEGAYV-LAVDIAEAVSETVDKIKSNGGKAKAYHVD 62
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAA-----AGNFLVPAEDLSPNGFRTVIEIDSVGT 124
+ + FG++D+L N A AG D+ F ++ +D GT
Sbjct: 63 ISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDV----FDKIMAVDMRGT 118
Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
F+M L + + GG IIN S+ A Y+ +AAK AV + T+S+A
Sbjct: 119 FLMTKMLLPLMME---------QGGSIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIA 169
Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKF-------GEKWDIA 237
+E+G D IR N IAPG I +T V KL + K+ G+ ++A
Sbjct: 170 IEYGRD-GIRANAIAPGTI-ETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVA 227
Query: 238 MAALYLASDAGKYVNGNTLIVDGG 261
++LASD ++ G T+ +DGG
Sbjct: 228 KLVVFLASDDSSFITGETIRIDGG 251
|
Length = 272 |
| >gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Score = 88.5 bits (220), Expect = 1e-20
Identities = 56/198 (28%), Positives = 88/198 (44%), Gaps = 13/198 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LKGKVAL+TG SGIG + L + GA + + RR+ L + + + A+ L D
Sbjct: 4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA--GAALALALD 61
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V R +E+ FG++DILVN A P ++ + + +I+ + G
Sbjct: 62 VTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTR 121
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATL-HYTATWYQIHVSAAKAAVDSITRSLALEWG 188
L + + G IIN+ + Y ++ A KAAV + + L E
Sbjct: 122 AVLPGMVERKSGH--------IINLGSIAGRYPYPGGAVY-GATKAAVRAFSLGLRQELA 172
Query: 189 TDYAIRVNGIAPGPIKDT 206
IRV I+PG ++ T
Sbjct: 173 -GTGIRVTVISPGLVETT 189
|
Length = 246 |
| >gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 88.4 bits (219), Expect = 1e-20
Identities = 73/253 (28%), Positives = 114/253 (45%), Gaps = 12/253 (4%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
+AL+TGG GIG +L L + G +A+ + + V + G A L+ D+
Sbjct: 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADIS 61
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
V + + H L LVN A F E+L+ V+ + G F+ C E
Sbjct: 62 DENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCRE 121
Query: 131 ALKYLKKGGRGQASSSSGGIIINI-SATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
A+K + G GG I+N+ SA A + +A+K A+D++T L+LE
Sbjct: 122 AVKRMALKHGGS-----GGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTTGLSLEVAA 176
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEI-RSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
IRVN + PG I S P + R K+ M + G+ ++A A ++L SD
Sbjct: 177 Q-GIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQ--RGGQPEEVAQAIVWLLSDKA 233
Query: 249 KYVNGNTLIVDGG 261
YV G+ + + GG
Sbjct: 234 SYVTGSFIDLAGG 246
|
Length = 247 |
| >gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 88.2 bits (219), Expect = 2e-20
Identities = 71/261 (27%), Positives = 112/261 (42%), Gaps = 23/261 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEG 68
LK KV ++TG G GIG I+++L K G+ + + +R + + + G IG+
Sbjct: 4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLA 63
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV RE + ++TI+ +G DILVN A P ++ I D
Sbjct: 64 DVSTREGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCS 123
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
E K +++GG +S GI +++ A KAAV ++T+ LALE
Sbjct: 124 QELAKEMREGGAIVNIASVAGIRPAYGLSIY----------GAMKAAVINLTKYLALELA 173
Query: 189 TDYAIRVNGIAPGPIKDTAG-----VSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
IRVN IAPG +K G V ++ +E K T K + ++A +
Sbjct: 174 P--KIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFT---LMGKILDPEEVAEFVAAI 228
Query: 244 ASDAGKYVNGNTLIVDGGNWL 264
+ G ++D G L
Sbjct: 229 LKIES--ITGQVFVLDSGESL 247
|
Length = 252 |
| >gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 87.4 bits (217), Expect = 3e-20
Identities = 80/278 (28%), Positives = 117/278 (42%), Gaps = 48/278 (17%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGL--- 66
L+GK+ ++TGG SGIG I +L +GA + A +H
Sbjct: 7 LQGKIIIVTGGSSGIGLAIVKELLANGANVVN------------ADIHGGDGQHENYQFV 54
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF---LVPAED------LSPNGFRTVI 117
DV E+ V I FG++D LVN A N LV +D L+ F +
Sbjct: 55 PTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMF 114
Query: 118 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVD 177
I+ G F+M + + K G+I+N+S+ + Q +A KAA++
Sbjct: 115 NINQKGVFLMSQAVARQMVKQH--------DGVIVNMSSEAGLEGSEGQSCYAATKAALN 166
Query: 178 SITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE----IRSKATDYMAA-YK--- 229
S TRS A E G + IRV G+APG I + G+ EE R + + A Y
Sbjct: 167 SFTRSWAKELG-KHNIRVVGVAPG-ILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTS 224
Query: 230 ------FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 261
G+ ++A YL SD Y+ G T + GG
Sbjct: 225 TIPLGRSGKLSEVADLVCYLLSDRASYITGVTTNIAGG 262
|
Length = 266 |
| >gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Score = 86.9 bits (215), Expect = 5e-20
Identities = 67/257 (26%), Positives = 114/257 (44%), Gaps = 15/257 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LK K A++TGGG GIG + + GA +A+ + A + + G A D
Sbjct: 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ R+ V + G +D+LVN A + P P + +I I+ G M H
Sbjct: 61 ITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHH 120
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
L + + G G+ I+NI++ + + +A K + + ++++A E
Sbjct: 121 AVLPGMVERGAGR--------IVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREHAR 172
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
+ I VN + PGP DTA + + PE++R T + + G+ D+ A L+ +
Sbjct: 173 -HGITVNVVCPGP-TDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFS 230
Query: 245 SDAGKYVNGNTLIVDGG 261
SD ++ G L V GG
Sbjct: 231 SDDASFITGQVLSVSGG 247
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250 |
| >gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4 | Back alignment and domain information |
|---|
Score = 86.0 bits (213), Expect = 5e-20
Identities = 64/211 (30%), Positives = 96/211 (45%), Gaps = 18/211 (8%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
K AL+TG GIG + L G + I R + L +A A +GL GDVR
Sbjct: 1 KAALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQE---LEGVLGLAGDVRD 57
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
D R V++ FG LD LVN A + P E+L+P +R V++ + G F H+A
Sbjct: 58 EADVRRAVDAMEEAFGGLDALVNNAGVGVMKPVEELTPEEWRLVLDTNLTGAFYCIHKAA 117
Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
L + G GG I+N+ + A +A+K + ++ + L+ +
Sbjct: 118 PALLRRG--------GGTIVNVGSLAGKNAFKGGAAYNASKFGLLGLSEAAMLDL-REAN 168
Query: 193 IRVNGIAPGPI-KDTAGVS-----KLAPEEI 217
IRV + PG + AG KLAPE++
Sbjct: 169 IRVVNVMPGSVDTGFAGSPEGQAWKLAPEDV 199
|
This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226 |
| >gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 86.6 bits (215), Expect = 7e-20
Identities = 80/261 (30%), Positives = 125/261 (47%), Gaps = 30/261 (11%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GKVA++TGG + IG ++ L GA +AI+ +AVAA SLG A + D
Sbjct: 4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVD-IDADNGAAVAA--SLGERARFIATD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ R V + + FG++DILVN A +L S + ++++ V ++
Sbjct: 61 ITDDAAIERAVATVVARFGRVDILVNLAC-TYLDDGLASSRADWLAALDVNLVSAAMLAQ 119
Query: 130 EALKYLKKGGRGQASSSSGGIIIN---ISATLHYTATW-YQIHVSAAKAAVDSITRSLAL 185
A +L +G GG I+N ISA T W Y A+KAA+ +TRS+A+
Sbjct: 120 AAHPHLARG---------GGAIVNFTSISAKFAQTGRWLY----PASKAAIRQLTRSMAM 166
Query: 186 EWGTDYAIRVNGIAPG----PIKDT-AGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
+ D IRVN ++PG + D +G + + + A + + G+ ++A
Sbjct: 167 DLAPD-GIRVNSVSPGWTWSRVMDELSGGDRAKADRV---AAPFHLLGRVGDPEEVAQVV 222
Query: 241 LYLASDAGKYVNGNTLIVDGG 261
+L SDA +V G VDGG
Sbjct: 223 AFLCSDAASFVTGADYAVDGG 243
|
Length = 261 |
| >gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Score = 86.1 bits (214), Expect = 9e-20
Identities = 71/279 (25%), Positives = 109/279 (39%), Gaps = 58/279 (20%)
Query: 9 ILKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGL 66
+L+GK L+ G + I + I+ L + GA +A + L V L + L
Sbjct: 3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQ-GERLEKRVEELAEELGSDLVL 61
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRTVIE 118
DV E + + +GKLD LV++ A G++L D S GF ++
Sbjct: 62 PCDVTNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYL----DTSREGFLIAMD 117
Query: 119 IDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-----YQIHVSAA 172
I S +F + A + GG I+ TL Y + Y + + A
Sbjct: 118 I-SAYSFTALAKAARPLMNNGG---------SIL-----TLTYLGSERVVPNYNV-MGVA 161
Query: 173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 232
KAA+++ R LA + G IRVN I+ GPI+ A S D+ K E
Sbjct: 162 KAALEASVRYLAADLG-KEGIRVNAISAGPIRTLAA----------SGIGDFRKMLKENE 210
Query: 233 KW----------DIAMAALYLASDAGKYVNGNTLIVDGG 261
++ A +L SD + G + VD G
Sbjct: 211 ANAPLRRNVTIEEVGNTAAFLLSDLSSGITGEIIYVDSG 249
|
Length = 259 |
| >gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 86.5 bits (214), Expect = 1e-19
Identities = 78/262 (29%), Positives = 117/262 (44%), Gaps = 20/262 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAALHSLGIPAIGLE 67
L+G+ AL+TG SGIG ++ + GA IA+ + + V + + G A+ L
Sbjct: 53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALP 112
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP-AEDLSPNGFRTVIEIDSVGTFI 126
GD++ ++VE + G LDILVN A V D++ F + + F
Sbjct: 113 GDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFW 172
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
+C A+ +L G AS IIN + Y + + ++ KAA+ + T++LA +
Sbjct: 173 LCKAAIPHLPPG----AS------IINTGSIQSYQPSPTLLDYASTKAAIVAFTKALAKQ 222
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA-MAALY--L 243
+ IRVN +APGP+ S P E K D+ + MA LY L
Sbjct: 223 V-AEKGIRVNAVAPGPVWTPLQPSGGQPPE---KIPDFGSETPMKRPGQPVEMAPLYVLL 278
Query: 244 ASDAGKYVNGNTLIVDGGNWLS 265
AS YV G V GG LS
Sbjct: 279 ASQESSYVTGEVFGVTGGLLLS 300
|
Length = 300 |
| >gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase | Back alignment and domain information |
|---|
Score = 83.8 bits (208), Expect = 1e-19
Identities = 40/181 (22%), Positives = 65/181 (35%), Gaps = 21/181 (11%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTV--LRSAVAALHSLGIPAIGLEGD 69
L+TGG G+G ++ L GA ++ RR VA L +LG D
Sbjct: 1 GTVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTVAACD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V R+ ++ + G LD +V+ A P E+L+P F V+ G + +
Sbjct: 61 VADRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEELTPERFERVLAPKVTGAWNLHE 120
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWY---QIHVSAAKAAVDSITRSLALE 186
G + S+ Q + +AA AA+D++ E
Sbjct: 121 LTRD------------LDLGAFVLFSSV---AGVLGSPGQANYAAANAALDALAEHRRAE 165
Query: 187 W 187
Sbjct: 166 G 166
|
This family contains a wide variety of dehydrogenases. Length = 167 |
| >gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR | Back alignment and domain information |
|---|
Score = 85.7 bits (212), Expect = 1e-19
Identities = 73/258 (28%), Positives = 117/258 (45%), Gaps = 16/258 (6%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
+VAL+TG SGIG I+ +LGK G + + R + L + V L G+ A G DVR
Sbjct: 4 EVALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAGVEADGRTCDVRS 63
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
+ +V + + +G +D+LVN A + +L+ + V+E + G F + E
Sbjct: 64 VPEIEALVAAAVARYGPIDVLVNNAGRSGGGATAELADELWLDVVETNLTGVFRVTKEV- 122
Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
LK GG + + G IINI++T + SA+K V T++L LE
Sbjct: 123 --LKAGGMLERGT---GRIINIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELART-G 176
Query: 193 IRVNGIAPGPIKDT---------AGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
I VN + PG ++ A + +++ EE + T + ++ ++A YL
Sbjct: 177 ITVNAVCPGFVETPMAASVREHYADIWEVSTEEAFDRITARVPLGRYVTPEEVAGMVAYL 236
Query: 244 ASDAGKYVNGNTLIVDGG 261
D V L V GG
Sbjct: 237 IGDGAAAVTAQALNVCGG 254
|
Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258 |
| >gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 85.2 bits (211), Expect = 2e-19
Identities = 73/266 (27%), Positives = 122/266 (45%), Gaps = 25/266 (9%)
Query: 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA--LHSLGIPAIG 65
+ +KGK +++GG GIG I + + G IA + +A GI A
Sbjct: 4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKA 63
Query: 66 LEGDVRKREDAVRVVESTINHFGKLDILVNAA-------AGNFLVPAEDLSPNGFRTVIE 118
++ + E + + F ++D ++ A G + L P G I
Sbjct: 64 YPLNILEPETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGY-TKFMRLKPKGLNN-IY 121
Query: 119 IDSVGTFIM-CHEALKYLKKGGRGQASSSSGGIIINISAT--LHYTATWYQIHVSAAKAA 175
+V F++ EA K ++K G GG II++S+T L Y Y H +KAA
Sbjct: 122 TATVNAFVVGAQEAAKRMEKVG--------GGSIISLSSTGNLVYIEN-YAGH-GTSKAA 171
Query: 176 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 235
V+++ + A E G + IRVN ++ GPI A + EE+++K + + G+ D
Sbjct: 172 VETMVKYAATELG-EKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQPED 230
Query: 236 IAMAALYLASDAGKYVNGNTLIVDGG 261
+A A L+L S+ ++ G T++VDGG
Sbjct: 231 LAGACLFLCSEKASWLTGQTIVVDGG 256
|
Length = 260 |
| >gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | Back alignment and domain information |
|---|
Score = 84.6 bits (210), Expect = 2e-19
Identities = 71/260 (27%), Positives = 115/260 (44%), Gaps = 27/260 (10%)
Query: 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRE 74
L+TG GIG+ ++ L + GA +A + R L VA L G P + DV
Sbjct: 1 VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFATYKLDVADSA 60
Query: 75 DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 134
VV+ +G +D+LVN A L + LS ++ +++ G F +
Sbjct: 61 AVDEVVQRLEREYGPIDVLVNVAGILRLGAIDSLSDEDWQATFAVNTFGVFNVSQAVSPR 120
Query: 135 LKKGGRGQ----ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTD 190
+K+ G S+++ + ++A Y +A+KAA+ +T+ L LE
Sbjct: 121 MKRRRSGAIVTVGSNAANVPRMGMAA---Y---------AASKAALTMLTKCLGLELA-P 167
Query: 191 YAIRVNGIAPGPIKDTAGVSKLAPEE--IRSKATDYMAAYKFG-------EKWDIAMAAL 241
Y IR N ++PG DT +L +E + ++ G E DIA A L
Sbjct: 168 YGIRCNVVSPGS-TDTEMQRQLWNDEYGEQQVIAGSPEQFRLGIPLGKIAEPSDIANAVL 226
Query: 242 YLASDAGKYVNGNTLIVDGG 261
+LASD ++ + L+VDGG
Sbjct: 227 FLASDLASHITMHDLVVDGG 246
|
Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250 |
| >gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 84.7 bits (209), Expect = 3e-19
Identities = 82/266 (30%), Positives = 121/266 (45%), Gaps = 24/266 (9%)
Query: 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLE 67
+LKGKVAL+TG GIG I+ +L GA +AI G RK V + S G A +
Sbjct: 1 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIG 60
Query: 68 GDVRKREDAVRVVESTINHF------GKLDILVNAAA---GNFLVPAEDLSPNGFRTVIE 118
++ + S N K DIL+N A G F+ E+ + F ++
Sbjct: 61 ANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFI---EETTEQFFDRMVS 117
Query: 119 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDS 178
+++ F + +AL L+ R IINIS+ + I S K A+++
Sbjct: 118 VNAKAPFFIIQQALSRLRDNSR----------IINISSAATRISLPDFIAYSMTKGAINT 167
Query: 179 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 238
+T +LA + G I VN I PG IK L+ ++ AT A + GE DIA
Sbjct: 168 MTFTLAKQLGAR-GITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIAD 226
Query: 239 AALYLASDAGKYVNGNTLIVDGGNWL 264
A +LAS ++V G + V GG+ L
Sbjct: 227 TAAFLASPDSRWVTGQLIDVSGGSCL 252
|
Length = 252 |
| >gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Score = 83.9 bits (208), Expect = 6e-19
Identities = 68/273 (24%), Positives = 107/273 (39%), Gaps = 42/273 (15%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-------MGRRKTVLRSAVA-ALHSLGI 61
LKGK L+TG G IG + + + G + + L SL
Sbjct: 2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSL-- 59
Query: 62 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA---AGNFLVPAEDLSPNGFRTVIE 118
+E D+ +E + + +GK+D VN A ++ D+S + F +
Sbjct: 60 ----VELDITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLS 115
Query: 119 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL--------HYTATWYQ--IH 168
+ +F+ + KY KK G GG ++NIS+ Y T +
Sbjct: 116 LHLGSSFLFSQQFAKYFKKQG--------GGNLVNISSIYGVVAPKFEIYEGTSMTSPVE 167
Query: 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 228
+A KA + +T+ LA + D IRVN ++PG I D PE +
Sbjct: 168 YAAIKAGIIHLTKYLAKYFK-DSNIRVNCVSPGGILDNQ------PEAFLNAYKKCCNGK 220
Query: 229 KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 261
+ DI ++L SD KY+ G +IVD G
Sbjct: 221 GMLDPDDICGTLVFLLSDQSKYITGQNIIVDDG 253
|
Length = 256 |
| >gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 83.5 bits (206), Expect = 1e-18
Identities = 71/259 (27%), Positives = 112/259 (43%), Gaps = 14/259 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAALHSLGIPAIGLE 67
LK + AL+TGG SGIG ++ + GA +AI + + + + G A+ L
Sbjct: 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLP 106
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP-AEDLSPNGFRTVIEIDSVGTFI 126
GD+ + A +V G LDI+ A +P DL+ F+ I+ F
Sbjct: 107 GDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFW 166
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
+ EA+ L KG II S+ Y + + + +A KAA+ + +R LA +
Sbjct: 167 LTQEAIPLLPKGAS----------IITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQ 216
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
+ IRVN +APGPI +S ++ + + G+ ++A +YLAS
Sbjct: 217 VA-EKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQ 275
Query: 247 AGKYVNGNTLIVDGGNWLS 265
YV V GG L
Sbjct: 276 ESSYVTAEVHGVCGGEHLG 294
|
Length = 294 |
| >gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 82.2 bits (203), Expect = 2e-18
Identities = 74/257 (28%), Positives = 118/257 (45%), Gaps = 20/257 (7%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVR 71
KV L+TG GIG ++ G ++ I R A+ + G A + GDV
Sbjct: 3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVA 62
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAE---DLSPNGFRTVIEIDSVGTFIMC 128
D + + ++ + FG+LD LVN A + P+ D+ R + + + +G ++
Sbjct: 63 NEADVIAMFDAVQSAFGRLDALVNNAG--IVAPSMPLADMDAARLRRMFDTNVLGAYLCA 120
Query: 129 HEALKYLK--KGGRGQASSSSGGIIINISATLHYTATWYQ-IHVSAAKAAVDSITRSLAL 185
EA + L +GGRG G I+N+S+ + + + + +K AVD++T LA
Sbjct: 121 REAARRLSTDRGGRG-------GAIVNVSSIASRLGSPNEYVDYAGSKGAVDTLTLGLAK 173
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI-RSKATDYMAAYKFGEKWDIAMAALYLA 244
E G +RVN + PG I+ S P R A + + GE ++A ++L
Sbjct: 174 ELGPH-GVRVNAVRPGLIETEIHASGGQPGRAARLGAQTPLG--RAGEADEVAETIVWLL 230
Query: 245 SDAGKYVNGNTLIVDGG 261
SDA YV G L V GG
Sbjct: 231 SDAASYVTGALLDVGGG 247
|
Length = 248 |
| >gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3 | Back alignment and domain information |
|---|
Score = 81.7 bits (202), Expect = 2e-18
Identities = 57/191 (29%), Positives = 86/191 (45%), Gaps = 9/191 (4%)
Query: 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR 73
V ++TG SGIG +L + GA + + R L + LG AI + DV
Sbjct: 2 VVVITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRELGGEAIAVVADVADA 61
Query: 74 EDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALK 133
R ++ + FG++D VN A ED++P FR V +++ +G AL
Sbjct: 62 AQVERAADTAVERFGRIDTWVNNAGVAVFGRFEDVTPEEFRRVFDVNYLGHVYGTLAALP 121
Query: 134 YLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA- 192
+L++ G GG +IN+ + L Y + Q SA+K AV T SL E D A
Sbjct: 122 HLRRRG--------GGALINVGSLLGYRSAPLQAAYSASKHAVRGFTESLRAELAHDGAP 173
Query: 193 IRVNGIAPGPI 203
I V + P +
Sbjct: 174 ISVTLVQPTAM 184
|
These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233 |
| >gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Score = 81.4 bits (201), Expect = 5e-18
Identities = 66/209 (31%), Positives = 97/209 (46%), Gaps = 20/209 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LKG+V L+TGG SG+G I + GA +A++ + L+ + A H G +G+EGD
Sbjct: 3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQ-ELEAAH--GDAVVGVEGD 59
Query: 70 VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVP----AEDLSPNGFRTVIEIDSVGT 124
VR +D V + FGK+D L+ NA ++ +D F V I+ G
Sbjct: 60 VRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGY 119
Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
+ AL L +S G +I IS Y ++ +AAK AV + + LA
Sbjct: 120 LLAVKAALPAL--------VASRGSVIFTISNAGFYPNGGGPLY-TAAKHAVVGLVKELA 170
Query: 185 LEWGTDYAIRVNGIAPGPI-KDTAGVSKL 212
E +RVNG+APG + D G L
Sbjct: 171 FELAP--YVRVNGVAPGGMSSDLRGPKSL 197
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262 |
| >gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 80.8 bits (200), Expect = 6e-18
Identities = 57/264 (21%), Positives = 106/264 (40%), Gaps = 22/264 (8%)
Query: 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIM---GRRKTVLRSAVAALHSLGIPAIGLE 67
+VA++ GGG +G + L + G +A+ + + + A + G+ A G
Sbjct: 1 MNQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGM-AYGFG 59
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
D + + + FG++D+LV A D F ++++ VG F+
Sbjct: 60 ADATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLC 119
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
E + + + G G II I++ + + SAAK +T+SLAL+
Sbjct: 120 AREFSRLMIRDG-------IQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDL 172
Query: 188 GTDYAIRVNGIAPGPIKDT----------AGVSKLAPEEIRSKATDYMAAYKFGEKWDIA 237
+Y I V+ + G + + A + P+E+ D + + + D+
Sbjct: 173 A-EYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVL 231
Query: 238 MAALYLASDAGKYVNGNTLIVDGG 261
L+ AS Y G ++ V GG
Sbjct: 232 NMLLFYASPKASYCTGQSINVTGG 255
|
Length = 259 |
| >gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 80.2 bits (198), Expect = 1e-17
Identities = 68/262 (25%), Positives = 111/262 (42%), Gaps = 33/262 (12%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-------VLRSAVAALHSLGIP 62
L GK +TG GIG I+L+ + GA + I + + +A + + G
Sbjct: 1 LAGKTLFITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGGK 60
Query: 63 AIGLEGDVRKREDAVRV-VESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 121
A+ D+R ED VR VE + FG +DILVN A+ L D + ++ +++
Sbjct: 61 ALPCIVDIRD-EDQVRAAVEKAVEKFGGIDILVNNASAISLTGTLDTPMKRYDLMMGVNT 119
Query: 122 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV--SAAKAAVDSI 179
GT++ L YLKK I+N+S L+ W++ H + AK +
Sbjct: 120 RGTYLCSKACLPYLKKSKNPH--------ILNLSPPLNLNPKWFKNHTAYTMAKYGMSMC 171
Query: 180 TRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI--RSKATDYMAAYKFGEKWDIA 237
+A E+ I VN + P TA ++ L ++ + + MA D A
Sbjct: 172 VLGMAEEFK-PGGIAVNALWPRTAIATAAMNMLGGVDVAACCRKPEIMA--------DAA 222
Query: 238 MAALYLASDAGKYVNGNTLIVD 259
A L + ++ GN LI +
Sbjct: 223 YAI--LTKPSSEF-TGNFLIDE 241
|
This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243 |
| >gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 79.2 bits (195), Expect = 2e-17
Identities = 57/255 (22%), Positives = 104/255 (40%), Gaps = 29/255 (11%)
Query: 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA---IG 65
+L ++ L+TG GIG E +L ++GA + ++GR + LR ++ G
Sbjct: 1 LLNDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFI 60
Query: 66 LEGDVRKREDAVRVVESTINHFGKLD-ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT 124
L+ E+ ++ + ++ +LD +L NA + P + +P ++ V +++ T
Sbjct: 61 LDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQVNVNAT 120
Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
F++ L L K S G ++ S+++ + +K A + + + LA
Sbjct: 121 FMLTQALLPLLLK--------SDAGSLVFTSSSVGRQGRANWGAYAVSKFATEGLXQVLA 172
Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE---IRSKATDYMAAYKFGEKWDIAMAAL 241
E+ +RVN I PG TA + P E D M Y L
Sbjct: 173 DEY-QQRNLRVNCINPGGT-RTAMRASAFPTEDPQKLKTPADIMPLY------------L 218
Query: 242 YLASDAGKYVNGNTL 256
+L D + G T
Sbjct: 219 WLMGDDSRRKTGMTF 233
|
Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236 |
| >gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR | Back alignment and domain information |
|---|
Score = 78.7 bits (194), Expect = 4e-17
Identities = 70/257 (27%), Positives = 111/257 (43%), Gaps = 19/257 (7%)
Query: 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSA-VAALHSLGIPAIGLEGDVRK 72
VA++TG GIG I+ +L G IAI + VA + + G AI + D+ +
Sbjct: 3 VAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAIYFQADIGE 62
Query: 73 REDAVRVVESTINHFGKLDILVNAAA------GNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
D +++ FG+LD LVN A G+ L DL+ + F +I I+ G F
Sbjct: 63 LSDHEALLDQAWEDFGRLDCLVNNAGIAVRPRGDLL----DLTEDSFDRLIAINLRGPFF 118
Query: 127 MCHE-ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
+ A + +++ R S II +++ Y + + +KA + TR LA
Sbjct: 119 LTQAVARRMVEQPDRFDGPHRS---IIFVTSINAYLVSPNRGEYCISKAGLSMATRLLAY 175
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY-KFGEKWDIAMAALYLA 244
D I V+ I PG I ++ E+ + ++G+ DIA A LA
Sbjct: 176 RLA-DEGIAVHEIRPGLIH--TDMTAPVKEKYDELIAAGLVPIRRWGQPEDIAKAVRTLA 232
Query: 245 SDAGKYVNGNTLIVDGG 261
S Y G + +DGG
Sbjct: 233 SGLLPYSTGQPINIDGG 249
|
This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255 |
| >gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 78.4 bits (194), Expect = 5e-17
Identities = 62/265 (23%), Positives = 107/265 (40%), Gaps = 36/265 (13%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
GK +TG GIG+ ++L + GA + + A L D
Sbjct: 6 FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQEDYPFATFVL---------D 56
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V +V + + G LD+LVNAA + + LS ++ +++ G F +
Sbjct: 57 VSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFR 116
Query: 130 EALKYLKKGGRGQ----ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
+ ++ G S+++ I ++A Y A+KAA+ S+ + + L
Sbjct: 117 AVMPQFRRQRSGAIVTVGSNAAHVPRIGMAA---Y---------GASKAALTSLAKCVGL 164
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT--DYMAAYKFG-------EKWDI 236
E Y +R N ++PG DT L +E + + +K G +I
Sbjct: 165 ELA-PYGVRCNVVSPGS-TDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEI 222
Query: 237 AMAALYLASDAGKYVNGNTLIVDGG 261
A A L+LASD ++ ++VDGG
Sbjct: 223 ANAVLFLASDLASHITLQDIVVDGG 247
|
Length = 252 |
| >gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs | Back alignment and domain information |
|---|
Score = 78.1 bits (193), Expect = 6e-17
Identities = 72/276 (26%), Positives = 118/276 (42%), Gaps = 49/276 (17%)
Query: 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIA---IMGRRKTVLRSAVAA------LHSL 59
G+V L+TG G G+G +L + GA + + G RK +S+ AA + +
Sbjct: 2 RFDGRVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAA 61
Query: 60 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA----GNFLVPAEDLSPNGFRT 115
G A+ V ED ++V++ I+ FG++DILVN A +F +E+ +
Sbjct: 62 GGKAVANYDSV---EDGEKIVKTAIDAFGRVDILVNNAGILRDRSFAKMSEED----WDL 114
Query: 116 VIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAA 175
V+ + G+F + A Y++K G IIN S+ + Q + SAAK
Sbjct: 115 VMRVHLKGSFKVTRAAWPYMRK--------QKFGRIINTSSAAGLYGNFGQANYSAAKLG 166
Query: 176 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 235
+ ++ +LA+E G Y I N IAP S+ T+ + +
Sbjct: 167 LLGLSNTLAIE-GAKYNITCNTIAPAA---------------GSRMTETVMPEDLFDALK 210
Query: 236 ---IAMAALYLASDAGKYVNGNTLIVDGGNWLSNPR 268
+A LYL ++ + V G V G W+ R
Sbjct: 211 PEYVAPLVLYLCHESCE-VTGGLFEVGAG-WIGKLR 244
|
Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250 |
| >gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Score = 78.0 bits (192), Expect = 7e-17
Identities = 73/256 (28%), Positives = 118/256 (46%), Gaps = 22/256 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L G+ AL+TG GIG EI+ L GA + + G R L + A LG +
Sbjct: 4 LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAA---ELGERVKIFPAN 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAA----GNFLVPAEDLSPNGFRTVIEIDSVGTF 125
+ R++ + + +DILVN A G F+ +S + +V+E++ TF
Sbjct: 61 LSDRDEVKALGQKAEADLEGVDILVNNAGITKDGLFV----RMSDEDWDSVLEVNLTATF 116
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
+ E + + G+ IINI++ + T Q + A+KA + ++SLA
Sbjct: 117 RLTRELTHPMMRRRYGR--------IINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQ 168
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
E T + VN +APG I ++A KL ++ + + + G ++A A YLAS
Sbjct: 169 EIATR-NVTVNCVAPGFI-ESAMTGKLNDKQ-KEAIMGAIPMKRMGTGAEVASAVAYLAS 225
Query: 246 DAGKYVNGNTLIVDGG 261
YV G T+ V+GG
Sbjct: 226 SEAAYVTGQTIHVNGG 241
|
Length = 245 |
| >gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2 | Back alignment and domain information |
|---|
Score = 77.3 bits (191), Expect = 8e-17
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 28/213 (13%)
Query: 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLE 67
L G L+TGG SGIG ++ + + G + I GRR+ L A L ++ +
Sbjct: 1 MKLTGNTVLITGGTSGIGLALARKFLEAGNTVIITGRREERLAEAKKELPNIHT----IV 56
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAA----GNFLVPAEDLSPNGFRTVIEIDSVG 123
DV E + E+ ++ + LDIL+N A + PA DL + T I+ + +G
Sbjct: 57 LDVGDAESVEALAEALLSEYPNLDILINNAGIQRPIDLRDPASDL--DKADTEIDTNLIG 114
Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH--VSAAKAAVDSITR 181
+ L +LKK + +A+ I+N+S+ L + + A KAA+ S T
Sbjct: 115 PIRLIKAFLPHLKK--QPEAT------IVNVSSGLAFVP--MAANPVYCATKAALHSYTL 164
Query: 182 SL--ALEWGTDYAIRVNGIAPGPIKDTAGVSKL 212
+L L+ D + V I P P DT +
Sbjct: 165 ALRHQLK---DTGVEVVEIVP-PAVDTELHEER 193
|
Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228 |
| >gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 77.6 bits (192), Expect = 1e-16
Identities = 73/286 (25%), Positives = 114/286 (39%), Gaps = 71/286 (24%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GK AL+TGG GIG +L + GA V+ +A + L + D
Sbjct: 7 LAGKRALVTGGTKGIGAATVARLLEAGA---------RVVTTARSRPDDLPEGVEFVAAD 57
Query: 70 VRKREDAVRVVESTINHFGKLDILVN------AAAGNFLVPAED-----LSPNGFRTVIE 118
+ E V + + G +DILV+ A AG F ++ L+ N V
Sbjct: 58 LTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAV-R 116
Query: 119 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS----------ATLHYTATWYQIH 168
+D L G + S G+II+++ +T Y
Sbjct: 117 LDRA------------LLPGMIARGS----GVIIHVTSIQRRLPLPESTTAY-------- 152
Query: 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY 228
+AAKAA+ + ++SL+ E +RVN ++PG I+ A V+ LA + TDY A
Sbjct: 153 -AAAKAALSTYSKSLSKEVAPK-GVRVNTVSPGWIETEAAVA-LAERLAEAAGTDYEGAK 209
Query: 229 K-------------FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 261
+ E ++A +LASD + G ++DGG
Sbjct: 210 QIIMDSLGGIPLGRPAEPEEVAELIAFLASDRAASITGTEYVIDGG 255
|
Length = 260 |
| >gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 77.1 bits (190), Expect = 3e-16
Identities = 73/257 (28%), Positives = 115/257 (44%), Gaps = 18/257 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA-LHSLGIPAIGLEG 68
L GKVA++TG +G+G +L L + GA + + + S V + + G A+ + G
Sbjct: 10 LSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAG 69
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
D+ +R A +V + + G LDI+VN A ++S + VI + G F++
Sbjct: 70 DISQRATADELVATAVG-LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLT 128
Query: 129 HEALKYLKKGGRGQASSSSG---GIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
A Y R +A ++ G G I+N S+ Q + AAKA + ++T S A
Sbjct: 129 RNAAAYW----RAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGITALTLSAAR 184
Query: 186 EWGTDYAIRVNGIAP-GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
G Y +R N I P TA V AP ++ + D ++ + +LA
Sbjct: 185 ALGR-YGVRANAICPRARTAMTADVFGDAP-DVEAGGIDPLSPEH------VVPLVQFLA 236
Query: 245 SDAGKYVNGNTLIVDGG 261
S A VNG IV G
Sbjct: 237 SPAAAEVNGQVFIVYGP 253
|
Length = 306 |
| >gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 76.3 bits (188), Expect = 4e-16
Identities = 63/260 (24%), Positives = 104/260 (40%), Gaps = 22/260 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-LRSAVAALHSLGIPAIGLEG 68
L GK+AL+TG GIG I+LQLG+ GA + I GR L + + G I +
Sbjct: 1 LSGKIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARGGKCIPVRC 60
Query: 69 DVRKREDAVRVVESTINHF-GKLDILVNAAAG-------NFLVPAEDLSPNGFRTVIEID 120
D ++ + E G+LDILVN A P + P + + +
Sbjct: 61 DHSDDDEVEALFERVAREQQGRLDILVNNAYAAVQLILVGVAKPFWEEPPTIWDDINNVG 120
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
+ A + K G+G I+ IS + + + KAA+D +
Sbjct: 121 LRAHYACSVYAAPLMVKAGKGL--------IVIIS-STGGLEYLFNVAYGVGKAAIDRMA 171
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD-IAMA 239
+A E + + V + PG ++ T V ++ ++ S A+ GE +
Sbjct: 172 ADMAHEL-KPHGVAVVSLWPGFVR-TELVLEMPEDDEGSWHAKERDAFLNGETTEYSGRC 229
Query: 240 ALYLASDAG-KYVNGNTLIV 258
+ LA+D ++G LI
Sbjct: 230 VVALAADPDLMELSGRVLIT 249
|
This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265 |
| >gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 74.4 bits (183), Expect = 1e-15
Identities = 70/263 (26%), Positives = 102/263 (38%), Gaps = 42/263 (15%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LKGK + G G+G+ ++ K GA + I R + L+ L G + GD
Sbjct: 3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVV-GD 61
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V E A V+E +D LV G E+ S G ++ +
Sbjct: 62 VSSTESARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFS--GLEEMLTNHIKIPLYAVN 119
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+L++LK+G SS GI Y A+ Q+ + AKA + LA E
Sbjct: 120 ASLRFLKEGSSIVLVSSMSGI---------YKASPDQLSYAVAKAGLAKAVEILASEL-L 169
Query: 190 DYAIRVNGIAPG-------PIKDTAGVSKL----APEEIRSKATDYMAAYKFGEKWDIAM 238
IRVNGIAP P ++ + KL AP E D A
Sbjct: 170 GRGIRVNGIAPTTISGDFEPERNWKKLRKLGDDMAPPE------------------DFAK 211
Query: 239 AALYLASDAGKYVNGNTLIVDGG 261
++L +D +V+G + VDGG
Sbjct: 212 VIIWLLTDEADWVDGVVIPVDGG 234
|
Length = 238 |
| >gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 74.4 bits (183), Expect = 1e-15
Identities = 64/260 (24%), Positives = 110/260 (42%), Gaps = 20/260 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAI---MGRRKTVLRSAVAALHSLGIPAIG 65
LKGKV L+ GG +G I+ L GA A+AI K VAA+ + G A+
Sbjct: 6 LKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVA 65
Query: 66 LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 125
+ D+ ++ + FG+ DI +N P ++S + + ++S F
Sbjct: 66 FQADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAF 125
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
EA ++L G+ I+ + +L T + + +KA V+ TR+ +
Sbjct: 126 FFIKEAGRHLNDNGK----------IVTLVTSLLGAFTPFYSAYAGSKAPVEHFTRAASK 175
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM--AAYKFG--EKWDIAMAAL 241
E+G I V + PGP+ + E + T K G + DI
Sbjct: 176 EFG-ARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPFIR 234
Query: 242 YLASDAGKYVNGNTLIVDGG 261
+L +D G ++ G T++++GG
Sbjct: 235 FLVTD-GWWITGQTILINGG 253
|
Length = 257 |
| >gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 74.5 bits (183), Expect = 1e-15
Identities = 59/240 (24%), Positives = 100/240 (41%), Gaps = 12/240 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAI-GLEG 68
+G+VAL+TG GIG ++ L +HG + RR + + A S G P + +
Sbjct: 4 WRGRVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSAGYPTLFPYQC 63
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
D+ E + + + +D+ +N A P G++ + +++ + I
Sbjct: 64 DLSNEEQILSMFSAIRTQHQGVDVCINNAGLARPEPLLSGKTEGWKEMFDVNVLALSICT 123
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATL-HYTATWYQIHV-SAAKAAVDSITRSLALE 186
EA + +K+ G IINI++ H H +A K AV ++T L E
Sbjct: 124 REAYQSMKERNVDD------GHIININSMSGHRVPPVSVFHFYAATKHAVTALTEGLRQE 177
Query: 187 W-GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
IR I+PG + +T KL + A Y + + D+A A LY+ S
Sbjct: 178 LREAKTHIRATSISPGLV-ETEFAFKLHDNDPEKAAATYESIPCLKPE-DVANAVLYVLS 235
|
Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 73.6 bits (181), Expect = 1e-15
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 20/204 (9%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
KVAL+TG GIG EI+ L + G +++ R L + A+ + D R
Sbjct: 1 KVALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLAALSASGGD----VEAVPYDARD 56
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
EDA +V++ + FG++D+LV+ A + S I+ + + L
Sbjct: 57 PEDARALVDALRDRFGRIDVLVHNAGIGRPTTLREGSDAELEAHFSINVIAPAELTRALL 116
Query: 133 KYLKKGGRGQA---SSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
L++ G G+ +S SG ++ +A SA+K A+ ++ +L E G
Sbjct: 117 PALREAGSGRVVFLNSLSGKRVLAGNAGY-----------SASKFALRALAHALRQE-GW 164
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLA 213
D+ +RV+ + PG + DT L
Sbjct: 165 DHGVRVSAVCPGFV-DTPMAQGLT 187
|
This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223 |
| >gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 73.9 bits (182), Expect = 4e-15
Identities = 45/178 (25%), Positives = 77/178 (43%), Gaps = 12/178 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GKV ++TG GIG E++ +L GA +A++ + L + A L + + D
Sbjct: 7 LAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG-DDRVLTVVAD 65
Query: 70 VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
V E + FG +D++V NA + + P+ FR VI+++ +G F
Sbjct: 66 VTDLAAMQAAAEEAVERFGGIDVVVANAGIASG-GSVAQVDPDAFRRVIDVNLLGVFHTV 124
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
L L G ++ +S+ + A A+KA V++ +L LE
Sbjct: 125 RATLPAL---------IERRGYVLQVSSLAAFAAAPGMAAYCASKAGVEAFANALRLE 173
|
Length = 296 |
| >gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 72.9 bits (179), Expect = 6e-15
Identities = 62/250 (24%), Positives = 106/250 (42%), Gaps = 13/250 (5%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
+ AL+TG GIG ++ + G + + L + AL + D+
Sbjct: 3 RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVAC--DLTD 60
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
+ + G +D+LV A D +P +R ++ + +C EA+
Sbjct: 61 AASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAY-LCVEAV 119
Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
S G ++NI +++ A SAAKA + T+ LA+E+G +
Sbjct: 120 -------LEGMLKRSRGAVVNI-GSVNGMAALGHPAYSAAKAGLIHYTKLLAVEYGR-FG 170
Query: 193 IRVNGIAPGPIKDTAGVSKLAPE-EIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYV 251
IR N +APG +K A +++A ++ + + F D+A A L+LAS A + +
Sbjct: 171 IRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLASPAARAI 230
Query: 252 NGNTLIVDGG 261
G L VDGG
Sbjct: 231 TGVCLPVDGG 240
|
Length = 257 |
| >gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 72.3 bits (178), Expect = 8e-15
Identities = 62/216 (28%), Positives = 89/216 (41%), Gaps = 28/216 (12%)
Query: 16 LLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRED 75
+TG SGIG +L G + + L A+AA G G DV R
Sbjct: 5 FITGAASGIGRATALLFAAEGWRVGAYDINEAGLA-ALAAELGAGNAWTG-ALDVTDRAA 62
Query: 76 -AVRVVESTINHFGKLDILVNAA----AGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
+ + G+LD+L N A G F ED+ VI+I+ G H
Sbjct: 63 WDAALADFAAATGGRLDVLFNNAGILRGGPF----EDIPLEAHDRVIDINVKGVLNGAHA 118
Query: 131 ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV---SAAKAAVDSITRSLALEW 187
AL YLK + G +IN S+ +A + Q + SA K AV +T +L LEW
Sbjct: 119 ALPYLKA--------TPGARVINTSSA---SAIYGQPGLAVYSATKFAVRGLTEALDLEW 167
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD 223
+ IRV + P + DTA + E+ + +T
Sbjct: 168 R-RHGIRVADVMPLFV-DTAML-DGTSNEVDAGSTK 200
|
Length = 260 |
| >gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 72.1 bits (177), Expect = 9e-15
Identities = 56/262 (21%), Positives = 102/262 (38%), Gaps = 19/262 (7%)
Query: 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMG-RRKTVLRSAVAALHSLGIPAIGLEGD 69
+VA++ GGG +G + L + G +A+ + + A G A G D
Sbjct: 1 MNQVAVVIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVADEINAEYGEKAYGFGAD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ + + + F ++D+LV +A D F ++++ VG F+
Sbjct: 61 ATNEQSVIALSKGVDEIFKRVDLLVYSAGIAKSAKITDFELGDFDRSLQVNLVGYFLCAR 120
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
E K + + G G II I++ + + SAAK +T+SLAL+
Sbjct: 121 EFSKLMIRDG-------IQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLA- 172
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAP----------EEIRSKATDYMAAYKFGEKWDIAMA 239
++ I VN + G + + L P E+ D + + + D+
Sbjct: 173 EHGITVNSLMLGNLLKSPMFQSLLPQYAKKLGIKESEVEQYYIDKVPLKRGCDYQDVLNM 232
Query: 240 ALYLASDAGKYVNGNTLIVDGG 261
L+ AS Y G ++ + GG
Sbjct: 233 LLFYASPKASYCTGQSINITGG 254
|
Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 70.4 bits (173), Expect = 3e-14
Identities = 64/262 (24%), Positives = 101/262 (38%), Gaps = 38/262 (14%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSAVAALHSLGIPAIGLEG 68
K L+TG SGIG + GA + + K L L +
Sbjct: 3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDLSGNFHFL----------QL 52
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFL---VPAEDLSPNGFRTVIEIDSVGTF 125
D+ +E + +DIL N A L P D S ++ + + + TF
Sbjct: 53 DLSDD------LEPLFDWVPSVDILCNTAG--ILDDYKPLLDTSLEEWQHIFDTNLTSTF 104
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
++ L + + G IIIN+ + + A +A+K A+ T+ LAL
Sbjct: 105 LLTRAYLPQMLERKSG--------IIINMCSIASFVAGGGGAAYTASKHALAGFTKQLAL 156
Query: 186 EWGTDYA---IRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242
DYA I+V GIAPG +K + P + ++ E ++A L+
Sbjct: 157 ----DYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLF 212
Query: 243 LASDAGKYVNGNTLIVDGGNWL 264
LAS Y+ G + +DGG W
Sbjct: 213 LASGKADYMQGTIVPIDGG-WT 233
|
Length = 235 |
| >gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 70.9 bits (174), Expect = 3e-14
Identities = 66/266 (24%), Positives = 110/266 (41%), Gaps = 25/266 (9%)
Query: 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAI---------MGRRKTVLRSAVAALHSL 59
+L G+V ++TG G GIG +L GA + + + ++ V + +
Sbjct: 3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA 62
Query: 60 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA---AGNFLVPAEDLSPNGFRTV 116
G A+ D+ + A +V++ + FG LD+LVN A + ++S + V
Sbjct: 63 GGEAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIA---NMSEEEWDAV 119
Query: 117 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 176
I + G F A Y + +A + IIN S+ + Q + SAAKA +
Sbjct: 120 IAVHLKGHFATLRHAAAYWR--AESKAGRAVDARIINTSSGAGLQGSVGQGNYSAAKAGI 177
Query: 177 DSITRSLALEWGTDYAIRVNGIAPGP-IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 235
++T A E G Y + VN IAP + T V + D MA +
Sbjct: 178 AALTLVAAAELGR-YGVTVNAIAPAARTRMTETVFAEMMAKPEEGEFDAMAPE------N 230
Query: 236 IAMAALYLASDAGKYVNGNTLIVDGG 261
++ ++L S + V G V+GG
Sbjct: 231 VSPLVVWLGSAESRDVTGKVFEVEGG 256
|
Length = 286 |
| >gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 70.5 bits (173), Expect = 4e-14
Identities = 44/190 (23%), Positives = 79/190 (41%), Gaps = 17/190 (8%)
Query: 16 LLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRED 75
++TG SG+G I+L+ + G +A+ + + L G DVR
Sbjct: 4 MITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQ 63
Query: 76 AVRVVESTINHFGKLDILVN----AAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
+ ++ +G +D++VN A+ G F E+LS + I I+ +G C
Sbjct: 64 LTALAQACEEKWGGIDVIVNNAGVASGGFF----EELSLEDWDWQIAINLMGVVKGCKAF 119
Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
L K+ G+ I+NI++ + AKA V +++ +L +E D
Sbjct: 120 LPLFKRQKSGR--------IVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVEL-ADD 170
Query: 192 AIRVNGIAPG 201
I V+ + P
Sbjct: 171 EIGVHVVCPS 180
|
Length = 270 |
| >gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 70.5 bits (173), Expect = 4e-14
Identities = 79/284 (27%), Positives = 113/284 (39%), Gaps = 67/284 (23%)
Query: 10 LKGKVALLTG--GGSGIGFEISLQLGKHGAAIAIM------GRRKTVLRSAVAALHSLGI 61
L GK AL+TG I + I+ QL GA + I GR + +R L+
Sbjct: 4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLN---- 59
Query: 62 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGF 113
P++ L DV+ E+ +GKLDILV+ A G+F S GF
Sbjct: 60 PSLFLPCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDF----SATSREGF 115
Query: 114 RTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH----V 169
+EI + +C A + +GG I+ TL Y I +
Sbjct: 116 ARALEISAYSLAPLCKAAKPLMSEGG---------SIV-----TLTYLGGVRAIPNYNVM 161
Query: 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG------------VSKLAPEEI 217
AKAA+++ R LA E G IRVN I+ GPI+ A V + AP +
Sbjct: 162 GVAKAALEASVRYLAAELGPK-NIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAP--L 218
Query: 218 RSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 261
R T + ++ A +L SD + G T+ VD G
Sbjct: 219 RRTVT----------QTEVGNTAAFLLSDLASGITGQTIYVDAG 252
|
Length = 258 |
| >gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6 | Back alignment and domain information |
|---|
Score = 69.7 bits (171), Expect = 5e-14
Identities = 56/195 (28%), Positives = 79/195 (40%), Gaps = 19/195 (9%)
Query: 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRE 74
L+TG SGIG ++ + K G +A+ RR L A L + DV E
Sbjct: 1 VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSVEVEILDVTDEE 60
Query: 75 DAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALK 133
V+ G LD+++ NA G DLS FR I+ + +G + AL
Sbjct: 61 RNQLVIAELEAELGGLDLVIINAGVG-KGTSLGDLSFKAFRETIDTNLLGAAAILEAALP 119
Query: 134 YLKKGGRGQASSSSGGIIINISATLHY----TATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ GRG ++ IS+ A Y SA+KAA+ S+ SL +
Sbjct: 120 QFRAKGRGH--------LVLISSVAALRGLPGAAAY----SASKAALSSLAESLRYDV-K 166
Query: 190 DYAIRVNGIAPGPIK 204
IRV I PG I
Sbjct: 167 KRGIRVTVINPGFID 181
|
These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239 |
| >gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 69.9 bits (172), Expect = 6e-14
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 24/159 (15%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG----IPAIGLE 67
GKV ++TG SGIG E + +L K GA + I R + A A + + I L+
Sbjct: 1 GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVIQLD 60
Query: 68 ----GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
VR+ E + F +LDIL+N A + P L+ +GF ++ +G
Sbjct: 61 LSSLASVRQ------FAEEFLARFPRLDILINNAGI--MAPPRRLTKDGFELQFAVNYLG 112
Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162
F++ + L LK S+ I+N+S+ H
Sbjct: 113 HFLLTNLLLPVLKA--------SAPSRIVNVSSIAHRAG 143
|
Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269 |
| >gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase | Back alignment and domain information |
|---|
Score = 70.0 bits (171), Expect = 6e-14
Identities = 66/269 (24%), Positives = 115/269 (42%), Gaps = 31/269 (11%)
Query: 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP--AIGLEGDVR 71
A++TG IG I++ L + G + + R S +AA + P A+ + D+
Sbjct: 3 AAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLS 62
Query: 72 KREDAVRVVESTIN----HFGKLDILVNAAAGNF---LVPAEDLSPNGFRTVIEI----- 119
E+ I+ FG+ D+LVN A+ + L+ + G + +E+
Sbjct: 63 NSATLFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAEL 122
Query: 120 ---DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 176
+++ + + +A + G R + S++ I+ A + ++ + AK A+
Sbjct: 123 FGSNAIAPYFLI-KAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMY-TMAKHAL 180
Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEK--- 233
+ +TRS ALE IRVNG+APG +S L DY G++
Sbjct: 181 EGLTRSAALELAP-LQIRVNGVAPG-------LSLLPDAMPFEVQEDYRRKVPLGQREAS 232
Query: 234 -WDIAMAALYLASDAGKYVNGNTLIVDGG 261
IA ++L S KY+ G + VDGG
Sbjct: 233 AEQIADVVIFLVSPKAKYITGTCIKVDGG 261
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267 |
| >gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 69.1 bits (170), Expect = 9e-14
Identities = 73/266 (27%), Positives = 115/266 (43%), Gaps = 35/266 (13%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
M K D+LK ++ L+TG G GIG E +L +HGA + ++GR + L + + + G
Sbjct: 1 MHYQPKPDLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAG 60
Query: 61 I--PAI---GLEGDVRKREDAVRVVESTINHFGKLD-ILVNAAAGNFLVPAEDLSPNGFR 114
PAI L ++ ++ ++ FG+LD +L NA L P E P ++
Sbjct: 61 GPQPAIIPLDLLT--ATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQ 118
Query: 115 TVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQIHVSAAK 173
V++++ TF++ L L K S + ++ S+ A W VS K
Sbjct: 119 DVMQVNVNATFMLTQALLPLLLK-------SPAASLVFTSSSVGRQGRANWGAYAVS--K 169
Query: 174 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK---ATDYMAAYKF 230
A + + + LA E+ +RVN I PG + TA + P E K D M Y
Sbjct: 170 FATEGMMQVLADEY-QGTNLRVNCINPGGTR-TAMRASAFPGEDPQKLKTPEDIMPLY-- 225
Query: 231 GEKWDIAMAALYLASDAGKYVNGNTL 256
LYL D + NG +
Sbjct: 226 ----------LYLMGDDSRRKNGQSF 241
|
Length = 247 |
| >gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 69.3 bits (170), Expect = 1e-13
Identities = 69/267 (25%), Positives = 110/267 (41%), Gaps = 34/267 (12%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEG 68
L GK L+TG GIG + G + ++ R L + A L + G+
Sbjct: 5 LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHAL 64
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA---EDLSPNGFRTVIEIDSVGTF 125
D+ E ++ G +DILVN A +P +D+ +R E+ G
Sbjct: 65 DLSSPEAREQLAAEA----GDIDILVNNAGA---IPGGGLDDVDDAAWRAGWELKVFGYI 117
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINI--SATLHYTATWYQIHVSAAKAAVDSITRSL 183
+ A +K RG G+I+N+ +A + A + I SA AA+ + TR+L
Sbjct: 118 DLTRLAYPRMK--ARG------SGVIVNVIGAAGENPDADY--ICGSAGNAALMAFTRAL 167
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR------SKATDYMAAYKFG---EKW 234
+ D +RV G+ PGP+ T + L R S+ + +A G
Sbjct: 168 GGK-SLDDGVRVVGVNPGPVA-TDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPE 225
Query: 235 DIAMAALYLASDAGKYVNGNTLIVDGG 261
++A +LAS Y +G + VDGG
Sbjct: 226 EVADLVAFLASPRSGYTSGTVVTVDGG 252
|
Length = 259 |
| >gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 68.4 bits (168), Expect = 2e-13
Identities = 45/196 (22%), Positives = 73/196 (37%), Gaps = 16/196 (8%)
Query: 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR 73
+ L+TGGGSGIG ++L+ K GA + I+ + + G + DV KR
Sbjct: 1 IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGKVHYYKCDVSKR 60
Query: 74 EDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
E+ + G + IL+N A G L +L E++++ F
Sbjct: 61 EEVYEAAKKIKKEVGDVTILINNAGVVSGKKL---LELPDEEIEKTFEVNTLAHFWTTKA 117
Query: 131 ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE--WG 188
L + + G I+ I++ + A+KAA SL LE
Sbjct: 118 FLPDMLERNHGH--------IVTIASVAGLISPAGLADYCASKAAAVGFHESLRLELKAY 169
Query: 189 TDYAIRVNGIAPGPIK 204
I+ + P I
Sbjct: 170 GKPGIKTTLVCPYFIN 185
|
17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243 |
| >gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 66.6 bits (163), Expect = 5e-13
Identities = 60/244 (24%), Positives = 86/244 (35%), Gaps = 32/244 (13%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
+V L+ GG +G + G +A + L A S+ +
Sbjct: 1 ARVVLVYGGRGALGSAVVQAFKSRGWWVASID-----LAENEEADASIIVLDSDSF---- 51
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAG-NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
E A +VV S GK+D L+ A G + + + + +FI H
Sbjct: 52 -TEQAKQVVASVARLSGKVDALICVAGGWAGGSAKSKSFVKNWDLMWKQNLWTSFIASHL 110
Query: 131 ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW-GT 189
A K+L GG ++ A T I AAKAAV +T+SLA E G
Sbjct: 111 ATKHLLSGGL----------LVLTGAKAALEPTPGMIGYGAAKAAVHQLTQSLAAENSGL 160
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK 249
N I P + DT K P+ S T IA L+ AS A +
Sbjct: 161 PAGSTANAILPVTL-DTPANRKAMPDADFSSWTPLEF---------IAELILFWASGAAR 210
Query: 250 YVNG 253
+G
Sbjct: 211 PKSG 214
|
Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221 |
| >gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Score = 66.5 bits (162), Expect = 6e-13
Identities = 69/250 (27%), Positives = 112/250 (44%), Gaps = 18/250 (7%)
Query: 16 LLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVRKRE 74
L+TG GIG I+ +L G I + ++ S V+A+ + G A L+ DV R
Sbjct: 2 LVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRV 61
Query: 75 DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA--- 131
++E+ I G +V A LS + VI + G + + H
Sbjct: 62 ACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMP 121
Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
+ ++GGR +S G++ N Q++ SAAKA + T++LA+E
Sbjct: 122 MIRARQGGRIITLASVSGVMGNRG----------QVNYSAAKAGLIGATKALAVELAKR- 170
Query: 192 AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYV 251
I VN IAPG I DT ++++ E +A + + G+ ++A A +L SD YV
Sbjct: 171 KITVNCIAPGLI-DTEMLAEV--EHDLDEALKTVPMNRMGQPAEVASLAGFLMSDGASYV 227
Query: 252 NGNTLIVDGG 261
+ V+GG
Sbjct: 228 TRQVISVNGG 237
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239 |
| >gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated | Back alignment and domain information |
|---|
Score = 66.8 bits (163), Expect = 7e-13
Identities = 71/254 (27%), Positives = 112/254 (44%), Gaps = 21/254 (8%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
G+VAL+TG GIG I+ L G +A + R + S VA +LG A + D
Sbjct: 10 GRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERG---SKVAK--ALGENAWFIAMD 64
Query: 70 VRKREDAVRVVESTINHFGKLDILV-NAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIM 127
V V + FG+LD LV NAA + E LS + V+ ++ G ++
Sbjct: 65 VADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLL 124
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
YL+ + G I+N+++T + +A+K + ++T +LA+
Sbjct: 125 AKHCAPYLR---------AHNGAIVNLASTRARQSEPDTEAYAASKGGLLALTHALAISL 175
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
G + IRVN ++PG I D S+ E + A + G D+A +L S
Sbjct: 176 GPE--IRVNAVSPGWI-DARDPSQRRAEPLSEADHAQHPAGRVGTVEDVAAMVAWLLSRQ 232
Query: 248 GKYVNGNTLIVDGG 261
+V G +VDGG
Sbjct: 233 AGFVTGQEFVVDGG 246
|
Length = 255 |
| >gnl|CDD|181020 PRK07533, PRK07533, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 66.5 bits (163), Expect = 9e-13
Identities = 62/205 (30%), Positives = 94/205 (45%), Gaps = 31/205 (15%)
Query: 69 DVRKREDAVRVVESTI-NHFGKLDILVNAAAGNFLVPAEDL-------SPNGFRTVIEID 120
DVR + V + I +G+LD L+++ A P EDL S GF +++
Sbjct: 68 DVR-EPGQLEAVFARIAEEWGRLDFLLHSIA---FAPKEDLHGRVVDCSREGFALAMDV- 122
Query: 121 SVGTFI-MCHEALKYLKKGGRGQASSSSGG--IIINISATLHYTATWYQIHVSAAKAAVD 177
S +FI M A + GG S G ++ N Y + + KAA++
Sbjct: 123 SCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVVEN-----------YNL-MGPVKAALE 170
Query: 178 SITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDI 236
S R LA E G IRV+ I+PGP+K T S + + + A + + + D+
Sbjct: 171 SSVRYLAAELG-PKGIRVHAISPGPLK-TRAASGIDDFDALLEDAAERAPLRRLVDIDDV 228
Query: 237 AMAALYLASDAGKYVNGNTLIVDGG 261
A +LASDA + + GNTL +DGG
Sbjct: 229 GAVAAFLASDAARRLTGNTLYIDGG 253
|
Length = 258 |
| >gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 66.0 bits (161), Expect = 1e-12
Identities = 61/258 (23%), Positives = 100/258 (38%), Gaps = 30/258 (11%)
Query: 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVL--RSAVAALHSLGIPAIGLEGDVRK 72
++TG GIG ++ L + GA + + +L L L DV
Sbjct: 1 VIVTGAAQGIGRAVARHLLQAGATVIALDLPFVLLLEYGDPLRLTPL---------DVAD 51
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
V + G +D LVN A + LS + ++ G F +
Sbjct: 52 AAAVREVCSRLLAEHGPIDALVNCAGVLRPGATDPLSTEDWEQTFAVNVTGVFNLLQAVA 111
Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
++K G I+ +++ + A+KAA+ S+++ L LE Y
Sbjct: 112 PHMKDRR--------TGAIVTVASNAAHVPRISMAAYGASKAALASLSKCLGLELA-PYG 162
Query: 193 IRVNGIAPGPIKDTAGVSKLAPEE------IRSKATDY---MAAYKFGEKWDIAMAALYL 243
+R N ++PG DTA L +E I + + K + DIA A L+L
Sbjct: 163 VRCNVVSPGS-TDTAMQRTLWHDEDGAAQVIAGVPEQFRLGIPLGKIAQPADIANAVLFL 221
Query: 244 ASDAGKYVNGNTLIVDGG 261
ASD ++ + L+VDGG
Sbjct: 222 ASDQAGHITMHDLVVDGG 239
|
2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244 |
| >gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10 | Back alignment and domain information |
|---|
Score = 65.5 bits (160), Expect = 2e-12
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 9/176 (5%)
Query: 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRS-AVAALHSLGIPAIGLEGDVRK 72
VA + G G G+G I+ + G ++A+ RR+ L + V + G A + D R
Sbjct: 1 VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGGSAKAVPTDARD 60
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
++ + + + G L++LV A N P + +P F V E+ + G F+ EA
Sbjct: 61 EDEVIALFDLIEEEIGPLEVLVYNAGANVWFPILETTPRVFEKVWEMAAFGGFLAAREAA 120
Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
K + GRG II AT + AK A+ ++ +S+A E G
Sbjct: 121 KRMLARGRGT--------IIFTGATASLRGRAGFAAFAGAKFALRALAQSMARELG 168
|
This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238 |
| >gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 64.9 bits (159), Expect = 4e-12
Identities = 53/194 (27%), Positives = 84/194 (43%), Gaps = 17/194 (8%)
Query: 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDV 70
KVAL+TG SGIG + +L + G + R + A + G+ + L DV
Sbjct: 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNP----ARAAPIP--GVELLEL--DV 54
Query: 71 RKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
V+ I G++D+LVN A AE+ S + + + + G M
Sbjct: 55 TDDASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRA 114
Query: 131 ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTD 190
L +++ G G+ IINIS+ L + Y +A+K AV+ + SL E
Sbjct: 115 VLPHMRAQGSGR--------IINISSVLGFLPAPYMALYAASKHAVEGYSESLDHEVRQ- 165
Query: 191 YAIRVNGIAPGPIK 204
+ IRV+ + P K
Sbjct: 166 FGIRVSLVEPAYTK 179
|
Length = 270 |
| >gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 64.1 bits (156), Expect = 7e-12
Identities = 70/267 (26%), Positives = 117/267 (43%), Gaps = 30/267 (11%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEG 68
L GK+A T GIGF ++ L + GA + ++ R + L+ A + S + +
Sbjct: 6 LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVA 65
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
D+ KRED R V+ N G+ DI + G ++S + +++ +
Sbjct: 66 DLTKREDLERTVKELKN-IGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLT 124
Query: 129 HEALKYLKKGGRGQ-ASSSSGGI---IINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
+ +++ G G+ S+S I I NI+ + + + ++ + R+LA
Sbjct: 125 RALVPAMERKGFGRIIYSTSVAIKEPIPNIALS------------NVVRISMAGLVRTLA 172
Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK----------FGEKW 234
E G I VNGI PG I+ T V +LA + + + A + GE
Sbjct: 173 KELGP-KGITVNGIMPGIIR-TDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPE 230
Query: 235 DIAMAALYLASDAGKYVNGNTLIVDGG 261
+I +LASD G Y+NG + VDGG
Sbjct: 231 EIGYLVAFLASDLGSYINGAMIPVDGG 257
|
Length = 263 |
| >gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 63.1 bits (154), Expect = 9e-12
Identities = 55/194 (28%), Positives = 83/194 (42%), Gaps = 19/194 (9%)
Query: 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR- 73
L+TG GIG E+ QL G I R + +AAL + LE DV
Sbjct: 1 VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAALGASHSRLHILELDVTDEI 60
Query: 74 EDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
++ V + LD+L+ NA + PA ++ V +++ +G ++ L
Sbjct: 61 AESAEAVAERL-GDAGLDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLGPLLLTQAFL 119
Query: 133 KYLKKGGRGQASSSSGGIIINISA-----TLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
L KG R IINIS+ + + WY S KAA++ +T+SLA+E
Sbjct: 120 PLLLKGAR--------AKIINISSRVGSIGDNTSGGWYSYRAS--KAALNMLTKSLAVEL 169
Query: 188 GTDYAIRVNGIAPG 201
D I V + PG
Sbjct: 170 KRD-GITVVSLHPG 182
|
Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233 |
| >gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 63.6 bits (155), Expect = 1e-11
Identities = 65/267 (24%), Positives = 110/267 (41%), Gaps = 31/267 (11%)
Query: 10 LKGKVALLTGG--GSGIGFEISLQLGKHGAAI-------------AIMGRRKTVLRSAVA 54
L K+AL+TG +GIG + +L G I M ++ VL
Sbjct: 3 LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEE- 61
Query: 55 ALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFR 114
+ S G+ +E D+ + RV + G IL+N AA + E+L+
Sbjct: 62 -IESYGVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLD 120
Query: 115 TVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKA 174
++ T ++ K Q +GG IIN+++ ++ +A K
Sbjct: 121 KHYAVNVRATMLLSSAFAK--------QYDGKAGGRIINLTSGQSLGPMPDELAYAATKG 172
Query: 175 AVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW 234
A+++ T+SLA E + I VN + PGP DT ++ EE++ + GE
Sbjct: 173 AIEAFTKSLAPELA-EKGITVNAVNPGPT-DTGWIT----EELKHHLVPKFPQGRVGEPV 226
Query: 235 DIAMAALYLASDAGKYVNGNTLIVDGG 261
D A +L S+ K++ G + +GG
Sbjct: 227 DAARLIAFLVSEEAKWITGQVIHSEGG 253
|
Length = 256 |
| >gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 63.3 bits (154), Expect = 1e-11
Identities = 67/267 (25%), Positives = 108/267 (40%), Gaps = 27/267 (10%)
Query: 10 LKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIM-----------GRRKTVLRSAVAAL 56
LK KVA++TG GIG I +L + GA I G + L
Sbjct: 4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEEL 63
Query: 57 HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV 116
G+ +E D+ + + ++ G ILVN AA + +L+
Sbjct: 64 LKNGVKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKH 123
Query: 117 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 176
++ T ++ + + K SGG IIN+++ ++ +A K A+
Sbjct: 124 YMVNVRATTLLSSQFARGFDKK--------SGGRIINMTSGQFQGPMVGELAYAATKGAI 175
Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
D++T SLA E I VN I PGP DT ++ EEI+ + GE D
Sbjct: 176 DALTSSLAAEVAH-LGITVNAINPGP-TDTGWMT----EEIKQGLLPMFPFGRIGEPKDA 229
Query: 237 AMAALYLASDAGKYVNGNTLIVDGGNW 263
A +LAS+ +++ G + +GG
Sbjct: 230 ARLIKFLASEEAEWITGQIIHSEGGFK 256
|
Length = 256 |
| >gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 63.0 bits (154), Expect = 2e-11
Identities = 70/275 (25%), Positives = 108/275 (39%), Gaps = 50/275 (18%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA-LHSLGIPAIGLEGDVR 71
+ AL+TG IG I+L L HG +A+ R A+AA + +LG A+ L+ D+
Sbjct: 10 RAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLA 69
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
+ +V G + +LVN A+ A + + + + F++
Sbjct: 70 DEAEVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAF 129
Query: 132 LKYLKKGGRGQASSSSGGIIINI-------------SATLHYTATWYQIHVSAAKAAVDS 178
+ L R G+++N+ S TL +KAA+ +
Sbjct: 130 ARALPADAR--------GLVVNMIDQRVWNLNPDFLSYTL-------------SKAALWT 168
Query: 179 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG---EKWD 235
TR+LA IRVN I PGP T + +PE+ + AA G +
Sbjct: 169 ATRTLAQALAPR--IRVNAIGPGP---TLPSGRQSPEDFARQH----AATPLGRGSTPEE 219
Query: 236 IAMAALYLASDAGKYVNGNTLIVDGGNWLS-NPRD 269
IA A YL V G + VDGG L+ D
Sbjct: 220 IAAAVRYLLDAPS--VTGQMIAVDGGQHLAWLTPD 252
|
Length = 258 |
| >gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 62.3 bits (152), Expect = 2e-11
Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 21/209 (10%)
Query: 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEG 68
+ AL+TG SGIG +L K G +A++ R + L + A L S G+ A
Sbjct: 3 LNSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSI 62
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
D+ E + + FG D+L+N A + P ++ + ++ VI+++ F C
Sbjct: 63 DLSNPEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCC 122
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTA--TW--YQIHVSAAKAAVDSITRSLA 184
L ++ G GG+IIN+S+ A W Y +KAA+ + T+ LA
Sbjct: 123 SAVLPGMRARG--------GGLIINVSSIAARNAFPQWGAY----CVSKAALAAFTKCLA 170
Query: 185 LEWGTDYAIRVNGIAPG----PIKDTAGV 209
E + IRV I G P+ DT V
Sbjct: 171 EE-ERSHGIRVCTITLGAVNTPLWDTETV 198
|
Length = 241 |
| >gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5 | Back alignment and domain information |
|---|
Score = 61.5 bits (150), Expect = 4e-11
Identities = 67/254 (26%), Positives = 109/254 (42%), Gaps = 26/254 (10%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEGDVR 71
K L+TG SGIG + + K GA + + GRR L+ L + + + L+ DV
Sbjct: 1 KTVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFPVKVLPLQLDVS 60
Query: 72 KREDAVRVVESTINHFGKLDILVNAA---AGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
RE +E+ F +DILVN A G L PA++ + T+I+ + G +
Sbjct: 61 DRESIEAALENLPEEFRDIDILVNNAGLALG--LDPAQEADLEDWETMIDTNVKGLLNVT 118
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATL-HYTATWYQIHVSAAKAAVDSITRSLALEW 187
L + R Q G IIN+ + Y ++ A KAAV + +L +
Sbjct: 119 RLILPIMIA--RNQ------GHIINLGSIAGRYPYAGGNVY-CATKAAVRQFSLNLRKDL 169
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW---DIAMAALYLA 244
IRV I PG ++ + + ++ ++ Y+ E DIA L++A
Sbjct: 170 -IGTGIRVTNIEPGLVETEFSLVRFHGDKEKADKV-----YEGVEPLTPEDIAETILWVA 223
Query: 245 SDAGKYVNGNTLIV 258
S +VN N + +
Sbjct: 224 SRP-AHVNINDIEI 236
|
These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249 |
| >gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 61.5 bits (149), Expect = 4e-11
Identities = 57/225 (25%), Positives = 92/225 (40%), Gaps = 37/225 (16%)
Query: 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP---AI 64
L K L+TG G+G +++ GA + ++ R + L A+ G P AI
Sbjct: 2 ATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAI 61
Query: 65 GLE----GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIE-- 118
+ + + A + E+T GKLD +V+ A + LSP F+TV E
Sbjct: 62 RFDLMSAEEKEFEQFAATIAEATQ---GKLDGIVHCAGYFYA-----LSPLDFQTVAEWV 113
Query: 119 ----IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKA 174
I++V + LK+ S + I + S A W A+KA
Sbjct: 114 NQYRINTVAPMGLTRALFPLLKQ------SPDASVIFVGESHGETPKAYWGGF--GASKA 165
Query: 175 AVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS 219
A++ + + A EW +R N + PGPI +P+ I+S
Sbjct: 166 ALNYLCKVAADEWERFGNLRANVLVPGPIN--------SPQRIKS 202
|
Length = 239 |
| >gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 60.4 bits (147), Expect = 7e-11
Identities = 69/250 (27%), Positives = 108/250 (43%), Gaps = 28/250 (11%)
Query: 16 LLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRED 75
L+ GG SGIG ++ GA + I R + L +A AL G P D+ E
Sbjct: 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG-GAPVRTAALDIT-DEA 58
Query: 76 AVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL 135
AV ++ G D +V AA P L + ++ G A +
Sbjct: 59 AV---DAFFAEAGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWG-------AYRVA 108
Query: 136 KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRV 195
+ A + GG + +S + + A AA++++ R LALE +RV
Sbjct: 109 R-----AARIAPGGSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALELA---PVRV 160
Query: 196 NGIAPGPIKDTAGVSKLAPEEIRSKATDYMA----AYKFGEKWDIAMAALYLASDAGKYV 251
N ++PG + DT SKLA + R A A + G+ D+A A L+LA++ +
Sbjct: 161 NTVSPGLV-DTPLWSKLAGDA-REAMFAAAAERLPARRVGQPEDVANAILFLAANG--FT 216
Query: 252 NGNTLIVDGG 261
G+T++VDGG
Sbjct: 217 TGSTVLVDGG 226
|
Length = 230 |
| >gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 60.7 bits (148), Expect = 9e-11
Identities = 56/196 (28%), Positives = 83/196 (42%), Gaps = 23/196 (11%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
KVAL+TG SGIG + +L G + RR + L SLG+ + L DV
Sbjct: 4 KVALVTGASSGIGKATARRLAAQGYTVYGAARRV----DKMEDLASLGVHPLSL--DVTD 57
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
V++ I G++D+LVN A ED+ + R E++ G + L
Sbjct: 58 EASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVL 117
Query: 133 KYLKKGGRGQASSSSGGIIINISAT----LHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
+++ G+ IINIS+ WY A K A++ + +L LE
Sbjct: 118 PHMRAQRSGR--------IINISSMGGKIYTPLGAWYH----ATKFALEGFSDALRLEVA 165
Query: 189 TDYAIRVNGIAPGPIK 204
+ I V I PG IK
Sbjct: 166 -PFGIDVVVIEPGGIK 180
|
Length = 273 |
| >gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 60.8 bits (148), Expect = 1e-10
Identities = 72/280 (25%), Positives = 115/280 (41%), Gaps = 51/280 (18%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
+V ++ G G GIG I+ ++G G + + + L +A L G E DV
Sbjct: 3 EVVVVIGAG-GIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS 60
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
RE +V+ + +T G + LV+ A + P++ SP ++++D GT ++ E
Sbjct: 61 RE-SVKALAATAQTLGPVTGLVHTAG---VSPSQ-ASP---EAILKVDLYGTALVLEEFG 112
Query: 133 KYLKKGGRGQASSSSGG-----IIINISATLHYTAT-------------------WYQIH 168
K + GG G +S G + L T T YQI
Sbjct: 113 KVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQI- 171
Query: 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM--- 225
AK A + A++WG A R+N I+PG I + LA +E+ D
Sbjct: 172 ---AKRANALRVMAEAVKWGERGA-RINSISPGII-----STPLAQDELNGPRGDGYRNM 222
Query: 226 ----AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 261
A + G +IA A +L G ++ G+ +VDGG
Sbjct: 223 FAKSPAGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGG 262
|
Length = 275 |
| >gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 59.9 bits (146), Expect = 1e-10
Identities = 42/180 (23%), Positives = 74/180 (41%), Gaps = 16/180 (8%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEGDV 70
G A++TG GIG + +L K G + ++ R + L + + G+ + D
Sbjct: 1 GTWAVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYGVETKTIAADF 60
Query: 71 RKREDAVRVVESTINHFGKLDI--LVNAAAGNFLVPAE--DLSPNGFRTVIEIDSVGTFI 126
+D +E + LDI LVN + +P + + + +I ++ + T
Sbjct: 61 SAGDDIYERIEKELEG---LDIGILVNNVGISHSIPEYFLETPEDELQDIINVNVMATLK 117
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
M L + K + G I+NIS+ T SA+KA +D +R+L E
Sbjct: 118 MTRLILPGMVKRKK--------GAIVNISSFAGLIPTPLLATYSASKAFLDFFSRALYEE 169
|
This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239 |
| >gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 59.8 bits (145), Expect = 3e-10
Identities = 60/234 (25%), Positives = 94/234 (40%), Gaps = 40/234 (17%)
Query: 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA 63
P + L GK LLTG SGIG + Q + GA + + RR+ +L + + G A
Sbjct: 32 PRQPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDA 91
Query: 64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
+ + D+ + +V G +DIL+N A + P + S + + D
Sbjct: 92 MAVPCDLSDLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAE-SLDRWH-----DVER 145
Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW------------YQIHVSA 171
T ++ + A L +G G IIN+ ATW Y A
Sbjct: 146 TMVLNYYAPLRLIRGLAPGMLERGDGHIINV-------ATWGVLSEASPLFSVYN----A 194
Query: 172 AKAAVDSITRSLALEWG-------TDY--AIRVNGIAPGPIKDTAGVSKLAPEE 216
+KAA+ +++R + EWG T Y + IA P K G+ L +E
Sbjct: 195 SKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIA--PTKAYDGLPALTADE 246
|
Length = 293 |
| >gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9 | Back alignment and domain information |
|---|
Score = 59.0 bits (143), Expect = 3e-10
Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 19/199 (9%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
K +TG SGIG E +L ++G + + + L + A L + + A L DV
Sbjct: 1 KAIFITGAASGIGRETALLFARNGWFVGLYDIDEDGLAALAAELGAENVVAGAL--DVTD 58
Query: 73 RED-AVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
R A + + G+LD L N A P ED+ +++I+ G + A
Sbjct: 59 RAAWAAALADFAAATGGRLDALFNNAGVGRGGPFEDVPLAAHDRMVDINVKGVLNGAYAA 118
Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV---SAAKAAVDSITRSLALEWG 188
L YLK + G +IN +++ +A + Q + SA K AV +T +L +EW
Sbjct: 119 LPYLKA--------TPGARVINTASS---SAIYGQPDLAVYSATKFAVRGLTEALDVEW- 166
Query: 189 TDYAIRVNGIAPGPIKDTA 207
+ IRV + P + DT
Sbjct: 167 ARHGIRVADVWPWFV-DTP 184
|
This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227 |
| >gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 59.0 bits (143), Expect = 3e-10
Identities = 62/257 (24%), Positives = 99/257 (38%), Gaps = 31/257 (12%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+ + L+TG GIG +SL+L G + + R P D
Sbjct: 1 MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-----------DFPGELFACD 49
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ E + +D +VN P + + V +++ +
Sbjct: 50 LADIEQTAATLAQINEIHP-VDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQ 108
Query: 130 EALKYLKKGGRGQASSSSGGIIINI-SATLH--YTATWYQIHVSAAKAAVDSITRSLALE 186
L+ +K +G+ I+NI S + T Y SAAK+A+ TR+ ALE
Sbjct: 109 AFLEGMKLREQGR--------IVNICSRAIFGALDRTSY----SAAKSALVGCTRTWALE 156
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAP--EEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
Y I VN +APGPI +T + P E + + + G ++A A +L
Sbjct: 157 LAE-YGITVNAVAPGPI-ETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAFLL 214
Query: 245 SDAGKYVNGNTLIVDGG 261
SD ++ G L VDGG
Sbjct: 215 SDDAGFITGQVLGVDGG 231
|
Length = 234 |
| >gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 59.3 bits (144), Expect = 3e-10
Identities = 52/196 (26%), Positives = 86/196 (43%), Gaps = 22/196 (11%)
Query: 12 GKVALLTGGGSGIGF---EISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEG 68
KV +TG G G E +L+ G A A R T + +A + + + L
Sbjct: 3 EKVWFITGASRGFGRAWTEAALERGDRVVATA----RDTATLADLAEKYGDRLLPLAL-- 56
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV R VE+ + HFG+LDI+VN A E+++ + R I+ + G +
Sbjct: 57 DVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVT 116
Query: 129 HEALKYLKKGGRGQ--ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
L YL++ G SS GGI + ++ A+K A++ ++ +LA E
Sbjct: 117 QAVLPYLREQRSGHIIQISSIGGISAFPMSGIY----------HASKWALEGMSEALAQE 166
Query: 187 WGTDYAIRVNGIAPGP 202
++ I+V + PG
Sbjct: 167 -VAEFGIKVTLVEPGG 181
|
Length = 275 |
| >gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 59.2 bits (144), Expect = 4e-10
Identities = 47/216 (21%), Positives = 81/216 (37%), Gaps = 21/216 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+GKV +TGG GIG + L GA +AI + + + A L +G D
Sbjct: 3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG----LVVGGPLD 58
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V +++ G +D+LVN A + P D R +++++ G +
Sbjct: 59 VTDPASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSK 118
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
A + GRG ++N+++ A+K AV T + LE
Sbjct: 119 LAAPRMVPRGRGH--------VVNVASLAGKIPVPGMATYCASKHAVVGFTDAARLELR- 169
Query: 190 DYAIRVNGIAPG--------PIKDTAGVSKLAPEEI 217
+ V+ + P G + PE++
Sbjct: 170 GTGVHVSVVLPSFVNTELIAGTGGAKGFKNVEPEDV 205
|
Length = 273 |
| >gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 60.0 bits (146), Expect = 4e-10
Identities = 27/88 (30%), Positives = 42/88 (47%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GKV L+TG SGIG ++++ + GA + ++ R L VA + + G A D
Sbjct: 369 LVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCD 428
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAA 97
+ V+ + G +D LVN A
Sbjct: 429 LTDSAAVDHTVKDILAEHGHVDYLVNNA 456
|
Length = 657 |
| >gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 58.8 bits (143), Expect = 4e-10
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 23/197 (11%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LK K LLTG GIG ++ L GA + ++GR L A+AA + D
Sbjct: 3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLE-ALAARLPYPGRHRWVVAD 61
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ E V + G +++L+N A N ED P ++ ++ +
Sbjct: 62 LTS-EAGREAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTR 120
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLH------YTATWYQIHVSAAKAAVDSITRSL 183
L L+ +++N+ +T Y + Y A+K A+ + +L
Sbjct: 121 ALLPLLRAQPS--------AMVVNVGSTFGSIGYPGYAS--Y----CASKFALRGFSEAL 166
Query: 184 ALEWGTDYAIRVNGIAP 200
E D +RV +AP
Sbjct: 167 RREL-ADTGVRVLYLAP 182
|
Length = 263 |
| >gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 58.9 bits (143), Expect = 5e-10
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 3/96 (3%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
GKVA++TG SG G + G + + ++ L AVA L + G +G+ D
Sbjct: 4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTD 63
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAA---AGNFL 102
V + ++ + FG + +L N A AG +
Sbjct: 64 VSDAAQVEALADAALERFGAVHLLFNNAGVGAGGLV 99
|
Length = 287 |
| >gnl|CDD|178331 PLN02730, PLN02730, enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Score = 58.6 bits (142), Expect = 7e-10
Identities = 59/202 (29%), Positives = 81/202 (40%), Gaps = 43/202 (21%)
Query: 78 RVVESTINHFGKLDILVNAAAGNFLV--PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL 135
V ES FG +DILV++ A V P + S G+ I S + +
Sbjct: 109 EVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIM 168
Query: 136 KKGGRGQASSSSGGIIINISATLHYTAT-----WYQIHVSAAKAAVDSITRSLALEWGTD 190
GG S +L Y A+ Y +S+AKAA++S TR LA E G
Sbjct: 169 NPGGA--------------SISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRK 214
Query: 191 YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA---TDYMAAYKFG--------EKWDIAMA 239
Y IRVN I+ GP+ A +KA D M Y + ++ A
Sbjct: 215 YKIRVNTISAGPLGSRA-----------AKAIGFIDDMIEYSYANAPLQKELTADEVGNA 263
Query: 240 ALYLASDAGKYVNGNTLIVDGG 261
A +LAS + G T+ VD G
Sbjct: 264 AAFLASPLASAITGATIYVDNG 285
|
Length = 303 |
| >gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 57.7 bits (140), Expect = 8e-10
Identities = 57/253 (22%), Positives = 104/253 (41%), Gaps = 32/253 (12%)
Query: 14 VALLTGGGSGIGFEISLQLGKHGAAI--AIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
V +LTG GIG ++ +L K G+ ++ R + L+ L G+ ++ D+
Sbjct: 1 VIILTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQELKEELRP-GLRVTTVKADLS 59
Query: 72 KREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
+++E+ G+ D+L+ NA + + E + + + +++ +
Sbjct: 60 DAAGVEQLLEAIRKLDGERDLLINNAGSLGPVSKIEFIDLDELQKYFDLNLTSPVCLTST 119
Query: 131 ALKYLKKGGRGQASSSSGGIIINIS--ATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
L+ KK ++N+S A ++ W ++KAA D R LA E
Sbjct: 120 LLRAFKK-------RGLKKTVVNVSSGAAVNPFKGW--GLYCSSKAARDMFFRVLAAE-- 168
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKF------GEKWDIAMAALY 242
+ +RV APG + DT EIR + D +F GE D +A
Sbjct: 169 -EPDVRVLSYAPGVV-DTDMQR-----EIRETSADPETRSRFRSLKEKGELLDPEQSAEK 221
Query: 243 LAS--DAGKYVNG 253
LA+ + K+ +G
Sbjct: 222 LANLLEKDKFESG 234
|
Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241 |
| >gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 2e-09
Identities = 46/245 (18%), Positives = 80/245 (32%), Gaps = 47/245 (19%)
Query: 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRE 74
++ G IG ++ L HG + GR S G + D+
Sbjct: 1 IIVIGATGTIGLAVAQLLSAHGHEVITAGR-------------SSGDYQV----DITDEA 43
Query: 75 DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 134
+ E G D +V+ A P +L+ F+ + +G + L Y
Sbjct: 44 SIKALFEKV----GHFDAIVSTAGDAEFAPLAELTDADFQRGLNSKLLGQINLVRHGLPY 99
Query: 135 LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIR 194
L + GG I S L + A++ R+ A+E IR
Sbjct: 100 L----------NDGGSITLTSGILAQRPIPGGAAAATVNGALEGFVRAAAIELPRG--IR 147
Query: 195 VNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGN 254
+N ++PG ++++ D+ ++ D+A A + A G
Sbjct: 148 INAVSPGVVEESLEAYG-----------DFFPGFEPVPAEDVAKAYVRSVEGA---FTGQ 193
Query: 255 TLIVD 259
L VD
Sbjct: 194 VLHVD 198
|
Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198 |
| >gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 57.3 bits (138), Expect = 2e-09
Identities = 38/134 (28%), Positives = 63/134 (47%)
Query: 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLE 67
D G+ A++TGG SGIG + + GA + + K LR AV L + G G+
Sbjct: 2 DGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVM 61
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
DVR RE+ + + G +D++ + A P +++ + +R VI++D G+
Sbjct: 62 CDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHT 121
Query: 128 CHEALKYLKKGGRG 141
L L + G G
Sbjct: 122 VEAFLPRLLEQGTG 135
|
Length = 275 |
| >gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Score = 56.6 bits (136), Expect = 2e-09
Identities = 62/250 (24%), Positives = 104/250 (41%), Gaps = 12/250 (4%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
++A +TGG GIG I +L K G +A G + +LG I EG+V
Sbjct: 4 RIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVG 63
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
+ + G++D+LVN A V ++ + VI+ + F + +
Sbjct: 64 DWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQV 123
Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
+ + + G G+ IINIS+ + Q + S AKA + T SLA E T
Sbjct: 124 IDGMVERGWGR--------IINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATK- 174
Query: 192 AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYV 251
+ VN ++PG I + K ++ K + + G +I +LAS+ +
Sbjct: 175 GVTVNTVSPGYI--GTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFS 232
Query: 252 NGNTLIVDGG 261
G ++GG
Sbjct: 233 TGADFSLNGG 242
|
Length = 246 |
| >gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 56.3 bits (136), Expect = 3e-09
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 22/219 (10%)
Query: 13 KVALLTGGGSGIGFEISLQLG----KHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEG 68
V L+TG SGIG ++++L K A M K R AA G L+
Sbjct: 1 TVVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEAAGALAGGTLETLQL 60
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV + VE +D+LV A L P E LS + +V +++ GT M
Sbjct: 61 DVCDSKSVAAAVERVTE--RHVDVLVCNAGVGLLGPLEALSEDAMASVFDVNVFGTVRML 118
Query: 129 HEALKYLKKGGRGQ--ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
L +K+ G G+ +SS GG+ L + + A+K A++ + SLA++
Sbjct: 119 QAFLPDMKRRGSGRILVTSSVGGL-----QGLPFNDVY-----CASKFALEGLCESLAVQ 168
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKL--APEEIRSKATD 223
+ + ++ I GP+ TA + K+ +PEE+ + D
Sbjct: 169 L-LPFNVHLSLIECGPVH-TAFMEKVLGSPEEVLDRTAD 205
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258 |
| >gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 56.2 bits (136), Expect = 4e-09
Identities = 55/199 (27%), Positives = 86/199 (43%), Gaps = 24/199 (12%)
Query: 11 KGKVALLTGGGSGIGFEISLQLGKHG-AAIAIMGR--RKTVLRSAVAALHSLG-IPAIGL 66
K+A++TG SG G +L+L K G IA M ++ L S L+ I L
Sbjct: 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQL 61
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVN---AAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
DV ++++ + + G++D+LVN A G F E++ +R E + G
Sbjct: 62 --DVTD-QNSIHNFQLVLKEIGRIDLLVNNAGYANGGF---VEEIPVEEYRKQFETNVFG 115
Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-TWYQIHVSAAKAAVDSITRS 182
+ L Y++K G IINIS+ +VS +K A++ + S
Sbjct: 116 AISVTQAVLPYMRK--------QKSGKIINISSISGRVGFPGLSPYVS-SKYALEGFSES 166
Query: 183 LALEWGTDYAIRVNGIAPG 201
L LE + I V I PG
Sbjct: 167 LRLEL-KPFGIDVALIEPG 184
|
Length = 280 |
| >gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 55.7 bits (135), Expect = 4e-09
Identities = 61/219 (27%), Positives = 83/219 (37%), Gaps = 36/219 (16%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+KGKV L+TG GIG QL GAA R +V L +P L+ D
Sbjct: 4 IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDP---ESVTDLGPRVVP---LQLD 57
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA--EDLSPNGFRTVIEIDSVGTFIM 127
V E + ILVN AG F + + + R +E + G M
Sbjct: 58 VTDPASVAAAAE----AASDVTILVN-NAGIFRTGSLLLEGDEDALRAEMETNYFGPLAM 112
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV----SAAKAAVDSITRSL 183
L G GG I+N+ +W SA+KAA S+T++L
Sbjct: 113 ARAFAPVLAANG--------GGAIVNV----LSVLSWVNFPNLGTYSASKAAAWSLTQAL 160
Query: 184 ALEWGTDYAIRVNGIAPGPIKDT-----AGVSKLAPEEI 217
E RV G+ PGPI DT K +P ++
Sbjct: 161 RAELA-PQGTRVLGVHPGPI-DTDMAAGLDAPKASPADV 197
|
Length = 238 |
| >gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 55.5 bits (134), Expect = 5e-09
Identities = 64/257 (24%), Positives = 97/257 (37%), Gaps = 31/257 (12%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA---LHSLGIPAIGL 66
GK L+ GG GIG I + GA + T S AA G A+
Sbjct: 4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRF-----TYAGSKDAAERLAQETGATAVQT 58
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
+ R V + G LDILV A A +L + + +I+ +
Sbjct: 59 DSADRDA------VIDVVRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYH 112
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
EA + + +GGR S G + ++ Y A+ K+A+ + R LA +
Sbjct: 113 ASVEAARQMPEGGRIIIIGSVNGDRMPVAGMAAYAAS---------KSALQGMARGLARD 163
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT--DYMAAYKFGEKWDIAMAALYLA 244
+G I +N + PGPI DT P K +MA + G ++A +LA
Sbjct: 164 FG-PRGITINVVQPGPI-DT----DANPANGPMKDMMHSFMAIKRHGRPEEVAGMVAWLA 217
Query: 245 SDAGKYVNGNTLIVDGG 261
+V G +DG
Sbjct: 218 GPEASFVTGAMHTIDGA 234
|
Length = 237 |
| >gnl|CDD|235776 PRK06300, PRK06300, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 56.0 bits (135), Expect = 5e-09
Identities = 52/190 (27%), Positives = 80/190 (42%), Gaps = 21/190 (11%)
Query: 79 VVESTINHFGKLDILVNAAAGNFLV--PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLK 136
V E FG +DILV++ A + + P + S G+ + S + +
Sbjct: 109 VAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMN 168
Query: 137 KGGRGQASSSSGGIIINISATLHYTATW-----YQIHVSAAKAAVDSITRSLALEWGTDY 191
GG + +L Y A+ Y +S+AKAA++S T+ LA E G +
Sbjct: 169 PGGS--------------TISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRW 214
Query: 192 AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYV 251
IRVN I+ GP+ AG + E + D+ + E + AA +L S +
Sbjct: 215 GIRVNTISAGPLASRAGKAIGFIERMVDYYQDWAPLPEPMEAEQVGAAAAFLVSPLASAI 274
Query: 252 NGNTLIVDGG 261
G TL VD G
Sbjct: 275 TGETLYVDHG 284
|
Length = 299 |
| >gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 55.7 bits (135), Expect = 6e-09
Identities = 56/207 (27%), Positives = 80/207 (38%), Gaps = 27/207 (13%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-----RKTVLRSAVAALHSLGIPAIGL 66
K L+TG SG G ++ AA+A R R R+ ALH A+
Sbjct: 4 MKTWLITGVSSGFGRALA------QAALAAGHRVVGTVRSEAARADFEALH--PDRALAR 55
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
DV + VV FG +D+LVN A E+ R E++ G
Sbjct: 56 LLDVTDFDAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVA 115
Query: 127 MCHEALKYLKKGGRGQ--ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
M L ++ RG +S GG+I +Y + K A++ I+ SLA
Sbjct: 116 MTKAVLPGMRARRRGHIVNITSMGGLITM-PGIGYYCGS---------KFALEGISESLA 165
Query: 185 LEWGTDYAIRVNGIAPGPIK-DTAGVS 210
E + I V + PG + D AG S
Sbjct: 166 KEVA-PFGIHVTAVEPGSFRTDWAGRS 191
|
Length = 277 |
| >gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 55.1 bits (133), Expect = 6e-09
Identities = 56/223 (25%), Positives = 88/223 (39%), Gaps = 32/223 (14%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAI-GLEG 68
G L+TGG SGIG ++ + + G + I GR + L A A P I
Sbjct: 3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAE-----NPEIHTEVC 57
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS--PNGFRTV---IEIDSVG 123
DV R+ +VE + L++L+N A + EDL+ + I + +
Sbjct: 58 DVADRDSRRELVEWLKKEYPNLNVLINNAG---IQRNEDLTGAEDLLDDAEQEIATNLLA 114
Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
+ L +L + IIN+S+ L + A KAA+ S T +L
Sbjct: 115 PIRLTALLLPHLLR--------QPEATIINVSSGLAFVPMASTPVYCATKAAIHSYTLAL 166
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA 226
E D ++ V +AP P+ DT E ++A M
Sbjct: 167 R-EQLKDTSVEVIELAP-PLVDT--------TEGNTQARGKMP 199
|
Length = 245 |
| >gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 54.8 bits (132), Expect = 8e-09
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD---TAGVS-KLAPEEIRSKATDYM 225
+ +K A+ TR A W +RVN +APGP++ A + E + + T
Sbjct: 152 AGSKEALTVWTRRRAATWLYGAGVRVNTVAPGPVETPILQAFLQDPRGGESVDAFVTPMG 211
Query: 226 AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 261
E +IA +LASDA ++NG L VDGG
Sbjct: 212 RR---AEPDEIAPVIAFLASDAASWINGANLFVDGG 244
|
Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 55.1 bits (133), Expect = 9e-09
Identities = 49/204 (24%), Positives = 82/204 (40%), Gaps = 12/204 (5%)
Query: 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRE 74
AL+ G SGIG +++L G +A+ RR V + + G A+ DV +
Sbjct: 13 ALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPD 72
Query: 75 DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 134
V G++++LV+ A + ++S F + ++I VG + L
Sbjct: 73 SVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLP- 131
Query: 135 LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW-GTDYAI 193
G G +I S + AAKA ++++ +L +E GT +
Sbjct: 132 ------GMIERRRGDLIFVGSDVALRQRPHMGAYG-AAKAGLEAMVTNLQMELEGT--GV 182
Query: 194 RVNGIAPGPIKDTAGVSKLAPEEI 217
R + + PGP G S L E I
Sbjct: 183 RASIVHPGPTLTGMGWS-LPAEVI 205
|
Length = 274 |
| >gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR) | Back alignment and domain information |
|---|
Score = 53.3 bits (128), Expect = 2e-08
Identities = 44/207 (21%), Positives = 68/207 (32%), Gaps = 54/207 (26%)
Query: 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRE 74
L+TGG GIG I+ L G+
Sbjct: 1 VLVTGGSGGIGGAIARWLASRGS------------------------------------- 23
Query: 75 DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 134
V VV + D++V+ AA DL+ + I + VGT + A +
Sbjct: 24 PKVLVVS-------RRDVVVHNAAILDDGRLIDLTGSRIERAIRANVVGTRRLLEAAREL 76
Query: 135 LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIR 194
+K G+ I IS+ +A+KAA+D + + A E G +
Sbjct: 77 MKAKRLGR--------FILISSVAGLFGAPGLGGYAASKAALDGLAQQWASE-GWGNGLP 127
Query: 195 VNGIAPGPIKDTAGVS-KLAPEEIRSK 220
+A G + +APEEI
Sbjct: 128 ATAVACGTWAGSGMAKGPVAPEEILGN 154
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186 |
| >gnl|CDD|181416 PRK08415, PRK08415, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 53.6 bits (129), Expect = 2e-08
Identities = 76/274 (27%), Positives = 108/274 (39%), Gaps = 48/274 (17%)
Query: 9 ILKGKVALLTG--GGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGL 66
I+KGK L+ G I + I+ + GA +A + + + LG +
Sbjct: 2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYV-Y 60
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRTVIE 118
E DV K E + ES GK+D +V++ A G+FL + S F +E
Sbjct: 61 ELDVSKPEHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFL----ETSKEAFNIAME 116
Query: 119 IDSVGTFIMCHEALK-YLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVD 177
I SV + I AL L G S GG+ HY + AKAA++
Sbjct: 117 I-SVYSLIELTRALLPLLNDGASVLTLSYLGGV----KYVPHYNV------MGVAKAALE 165
Query: 178 SITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEK---- 233
S R LA++ G IRVN I+ GPIK A S D+ K+ E
Sbjct: 166 SSVRYLAVDLGKK-GIRVNAISAGPIKTLAA----------SGIGDFRMILKWNEINAPL 214
Query: 234 ------WDIAMAALYLASDAGKYVNGNTLIVDGG 261
++ + +YL SD V G VD G
Sbjct: 215 KKNVSIEEVGNSGMYLLSDLSSGVTGEIHYVDAG 248
|
Length = 274 |
| >gnl|CDD|180669 PRK06720, PRK06720, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 52.3 bits (125), Expect = 2e-08
Identities = 32/88 (36%), Positives = 51/88 (57%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GKVA++TGGG GIG +L L K GA + + + ++ V + +LG A+ + D
Sbjct: 14 LAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYD 73
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAA 97
+ K+ D RV+ T+N F ++D+L A
Sbjct: 74 MEKQGDWQRVISITLNAFSRIDMLFQNA 101
|
Length = 169 |
| >gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 4e-08
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVA-ALHSLGIPAIGLEG 68
L GK AL+TG GIG + + L GA + + R+K + V + + G A +
Sbjct: 4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGA 63
Query: 69 DVRKREDAVRVVESTINHFGKLDILV-NAAAG 99
D+ E ++++ FG LD LV NA+ G
Sbjct: 64 DLTDEESVAALMDTAREEFGGLDALVLNASGG 95
|
Length = 248 |
| >gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 53.1 bits (128), Expect = 4e-08
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GK A++TGG SG+G E + L + GA + + RR V R A+A + + + + L
Sbjct: 24 LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADL 83
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAA 98
R A R ++S ++DIL+N A
Sbjct: 84 ESVRAFAERFLDSG----RRIDILINNAG 108
|
Length = 315 |
| >gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7 | Back alignment and domain information |
|---|
Score = 52.0 bits (125), Expect = 6e-08
Identities = 52/228 (22%), Positives = 85/228 (37%), Gaps = 24/228 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAI-GLEG 68
+K K L+TG GIG L HGA R + A L + + L
Sbjct: 1 IKDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDP---GSAAHLVAKYGDKVVPLRL 57
Query: 69 DVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
DV E +++ +D+++ NA E+ + + ++++ G +
Sbjct: 58 DVTDPES----IKAAAAQAKDVDVVINNAGVLKPATLLEEGALEALKQEMDVNVFGLLRL 113
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
LK G G I+N+++ SA+K+A S+T+ L E
Sbjct: 114 AQAFAPVLKANGGGA--------IVNLNSVASLKNFPAMGTYSASKSAAYSLTQGLRAEL 165
Query: 188 GTDYAIRVNGIAPGPIKDT-----AGVSKLAPEEIRSKATDYMAAYKF 230
V + PGPI DT AG K +PE + + A +F
Sbjct: 166 A-AQGTLVLSVHPGPI-DTRMAAGAGGPKESPETVAEAVLKALKAGEF 211
|
These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235 |
| >gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 3e-07
Identities = 55/204 (26%), Positives = 82/204 (40%), Gaps = 33/204 (16%)
Query: 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR 73
+ L+TG +G G I+ + + G + GRR+ L+ LG + DVR R
Sbjct: 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKD---ELGDNLYIAQLDVRNR 58
Query: 74 EDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
++ S + +D+LVN A L PA S + T+I+ ++ G M L
Sbjct: 59 AAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVL 118
Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATW-------YQIHVSAAKAAVDSITRSLAL 185
+ + G IINI +T +W Y A KA V R +L
Sbjct: 119 PGMVERNHGH--------IINIGST---AGSWPYAGGNVY----GATKAFV----RQFSL 159
Query: 186 EWGTDY---AIRVNGIAPGPIKDT 206
TD A+RV I PG + T
Sbjct: 160 NLRTDLHGTAVRVTDIEPGLVGGT 183
|
Length = 248 |
| >gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases | Back alignment and domain information |
|---|
Score = 49.0 bits (118), Expect = 3e-07
Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 4/109 (3%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSA---VAALHSLGIPAIGLEG 68
L+TGG G+G ++ L + GA + ++ R A +A L + G +
Sbjct: 1 GTYLITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAGARVTVVAC 60
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVI 117
DV R+ V+ + G L +++AA L+P F V+
Sbjct: 61 DVADRDALAAVLAAIPAVEGPLTGVIHAAGVLDDGVLASLTPERFAAVL 109
|
It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180 |
| >gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 49.9 bits (120), Expect = 3e-07
Identities = 48/196 (24%), Positives = 77/196 (39%), Gaps = 25/196 (12%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
AL+TG GIG I+ +L + GR L A L A D+
Sbjct: 4 PTALITGASRGIGAAIARELAPTHTLLL-GGRPAERLDELAAELPG----ATPFPVDLTD 58
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
E + + + G+LD+LV+ A L P + + + +R +E++ V + L
Sbjct: 59 PEA----IAAAVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLL 114
Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATW--YQIHVSAAKAAVDSITRSLALEWGTD 190
L + G + IN A L W Y +A+K A+ ++ +L E
Sbjct: 115 PAL-RAAHGHV------VFINSGAGLRANPGWGSY----AASKFALRALADALREEEPG- 162
Query: 191 YAIRVNGIAPGPIKDT 206
+RV + PG DT
Sbjct: 163 -NVRVTSVHPGRT-DT 176
|
Length = 227 |
| >gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 50.0 bits (120), Expect = 7e-07
Identities = 57/231 (24%), Positives = 86/231 (37%), Gaps = 23/231 (9%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
GK+ ++TG GSGIG E +L + GA + + + + G A DV
Sbjct: 315 GKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVS 374
Query: 72 KREDAVRVVESTINHFGKLDILVNAA----AGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
+ E G DI+VN A AG FL D S + V++++ + I
Sbjct: 375 DADAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFL----DTSAEDWDRVLDVN-LWGVIH 429
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
GR +GG I+N+++ Y + + +KAAV ++ L E
Sbjct: 430 GCRLF------GRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSECLRAEL 483
Query: 188 GTDYAIRVNGIAPG----PIKDT---AGVSKLAPEEIRSKATDYMAAYKFG 231
I V I PG I T AG R +A +G
Sbjct: 484 A-AAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYG 533
|
Length = 582 |
| >gnl|CDD|180596 PRK06505, PRK06505, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 8e-07
Identities = 74/292 (25%), Positives = 116/292 (39%), Gaps = 67/292 (22%)
Query: 8 DILKGKVALLTG--GGSGIGFEISLQLGKHGAAIAI------MGRRKTVLRSAVAALHSL 59
+++GK L+ G I + I+ QL GA +A +G+R L ++ +
Sbjct: 3 GLMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGS---- 58
Query: 60 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAE------DLSPNGF 113
L DV V E+ +GKLD +V+A F E D + F
Sbjct: 59 ---DFVLPCDVEDIASVDAVFEALEKKWGKLDFVVHAIG--FSDKNELKGRYADTTRENF 113
Query: 114 -RTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-----YQI 167
RT++ I C + K R GG ++ TL Y + Y +
Sbjct: 114 SRTMV--------ISCFSFTEIAK---RAAKLMPDGGSML----TLTYGGSTRVMPNYNV 158
Query: 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA 227
+ AKAA+++ R LA ++G IRVN I+ GP++ AG + D A
Sbjct: 159 -MGVAKAALEASVRYLAADYGPQ-GIRVNAISAGPVRTLAG----------AGIGDARAI 206
Query: 228 YKFGEKW----------DIAMAALYLASDAGKYVNGNTLIVDGG-NWLSNPR 268
+ + ++ ++ +ALYL SD V G VD G N +S P
Sbjct: 207 FSYQQRNSPLRRTVTIDEVGGSALYLLSDLSSGVTGEIHFVDSGYNIVSMPT 258
|
Length = 271 |
| >gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 3e-06
Identities = 48/223 (21%), Positives = 79/223 (35%), Gaps = 25/223 (11%)
Query: 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRR-----KTVLRSAVAALHSLGIP 62
+ G V L+TGG GIG ++ L + A + ++GR + +AAL +LG
Sbjct: 202 LKPGGVYLVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGAR 261
Query: 63 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 122
+ + DV R++E +G +D +++AA + F V+
Sbjct: 262 VLYISADVTDAAAVRRLLEKVRERYGAIDGVIHAAGVLRDALLAQKTAEDFEAVLAPKVD 321
Query: 123 GTFIM----CHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQIHVSAAKAAVD 177
G + E L + SS Y A + +A
Sbjct: 322 GLLNLAQALADEPLDFF------VLFSSVSAFFGGAGQA-DYAAANAFLDAFAAYLRQRG 374
Query: 178 SITRSLALEWGTDYAIRVNGIAPGPI----KDTAGVSKLAPEE 216
R L++ W A R G+A AG+ + PEE
Sbjct: 375 PQGRVLSINWP---AWREGGMAADLGARELLARAGLLPIEPEE 414
|
Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436 |
| >gnl|CDD|181260 PRK08159, PRK08159, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 3e-06
Identities = 69/267 (25%), Positives = 110/267 (41%), Gaps = 34/267 (12%)
Query: 9 ILKGKVALLTG--GGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGL 66
++ GK L+ G I + I+ GA +A + + + LG G
Sbjct: 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAG- 65
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRTVIE 118
DV V E+ +GKLD +V+A G ++ D S + F ++
Sbjct: 66 HCDVTDEASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYV----DTSRDNFTMTMD 121
Query: 119 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH---VSAAKAA 175
I SV +F + R + + GG I+ ++ +Y A H + AKAA
Sbjct: 122 I-SVYSFTAVAQ---------RAEKLMTDGGSILTLT---YYGAEKVMPHYNVMGVAKAA 168
Query: 176 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 235
+++ + LA++ G IRVN I+ GPIK T S + K +Y A + +
Sbjct: 169 LEASVKYLAVDLGPK-NIRVNAISAGPIK-TLAASGIGDFRYILKWNEYNAPLRRTVTIE 226
Query: 236 -IAMAALYLASDAGKYVNGNTLIVDGG 261
+ +ALYL SD + V G VD G
Sbjct: 227 EVGDSALYLLSDLSRGVTGEVHHVDSG 253
|
Length = 272 |
| >gnl|CDD|236308 PRK08594, PRK08594, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 4e-06
Identities = 58/253 (22%), Positives = 101/253 (39%), Gaps = 36/253 (14%)
Query: 24 IGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP-AIGLEGDVRKREDAVRVVES 82
I + I+ L GA + + + + +L ++ L DV E+ E+
Sbjct: 21 IAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFET 80
Query: 83 TINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 134
G + + + A G FL + S +GF I + + EA K
Sbjct: 81 IKEEVGVIHGVAHCIAFANKEDLRGEFL----ETSRDGFLLAQNISAYSLTAVAREAKKL 136
Query: 135 LKKGGRGQASSSSGG--IIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
+ +GG + GG ++ N Y + + AKA++++ + LA + G D
Sbjct: 137 MTEGGSIVTLTYLGGERVVQN-----------YNV-MGVAKASLEASVKYLANDLGKD-G 183
Query: 193 IRVNGIAPGPIKDTA--GVSKLAP--EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
IRVN I+ GPI+ + GV +EI +A + + ++ A +L SD
Sbjct: 184 IRVNAISAGPIRTLSAKGVGGFNSILKEIEERA----PLRRTTTQEEVGDTAAFLFSDLS 239
Query: 249 KYVNGNTLIVDGG 261
+ V G + VD G
Sbjct: 240 RGVTGENIHVDSG 252
|
Length = 257 |
| >gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 4e-06
Identities = 54/206 (26%), Positives = 84/206 (40%), Gaps = 19/206 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L G V ++TG SGIG + + GA + + R + L++ +LG + + D
Sbjct: 5 LHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTD 64
Query: 70 VRKREDAVRVVESTINHF-GKLDILVN----AAAGNFLVPAEDLSPNGFRTVIEIDSVGT 124
V D V+ + + F G++D+ VN A G F E+ VI+ + +G
Sbjct: 65 V-TDADQVKALATQAASFGGRIDVWVNNVGVGAVGRF----EETPIEAHEQVIQTNLIGY 119
Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
H AL KK G GI IN+ + + A Y SA+K + + +L
Sbjct: 120 MRDAHAALPIFKKQGH--------GIFINMISLGGFAAQPYAAAYSASKFGLRGFSEALR 171
Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVS 210
E I V + P DT G
Sbjct: 172 GELADHPDIHVCDVYPA-FMDTPGFR 196
|
Length = 330 |
| >gnl|CDD|219957 pfam08659, KR, KR domain | Back alignment and domain information |
|---|
Score = 45.6 bits (109), Expect = 5e-06
Identities = 22/106 (20%), Positives = 44/106 (41%), Gaps = 4/106 (3%)
Query: 16 LLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVL---RSAVAALHSLGIPAIGLEGDVR 71
L+TGG G+G E++ L + GA + ++ R + +A L + G + DV
Sbjct: 4 LVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALLAELEARGAEVTVVACDVS 63
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVI 117
R+ ++ L +++AA +++ F V+
Sbjct: 64 DRDAVRALLAEIRADGPPLRGVIHAAGVLRDALLANMTAEDFARVL 109
|
This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181 |
| >gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Score = 45.3 bits (108), Expect = 1e-05
Identities = 61/251 (24%), Positives = 98/251 (39%), Gaps = 29/251 (11%)
Query: 16 LLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRED 75
L+TG G IG ++ L G + + R A+ L G A ++ D
Sbjct: 6 LITGAGQRIGLALAWHLLAQGQPVIVSYRTH---YPAIDGLRQAG--AQCIQADFSTNAG 60
Query: 76 AVRVVESTINHFGKLD-ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 134
+ ++ H L I+ NA+ P L+ +++I +++
Sbjct: 61 IMAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADV-LARMMQIHVNAPYLLNLALEDL 119
Query: 135 LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA-- 192
L+ G + II+I+ + + I +A+KAA+D++T S A A
Sbjct: 120 LRGHGHAASD------IIHITDYVVEKGSDKHIAYAASKAALDNMTLSFA----AKLAPE 169
Query: 193 IRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKF--GEKWDIAMAALYLASDAGKY 250
++VN IAP I G R KA + K GE+ I + L S Y
Sbjct: 170 VKVNSIAPALILFNEGDD----AAYRQKALA-KSLLKIEPGEEEIIDLVDYLLTSC---Y 221
Query: 251 VNGNTLIVDGG 261
V G +L VDGG
Sbjct: 222 VTGRSLPVDGG 232
|
Length = 236 |
| >gnl|CDD|237099 PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 1e-05
Identities = 36/105 (34%), Positives = 49/105 (46%), Gaps = 12/105 (11%)
Query: 162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA----GVSKLAPEEI 217
AT YQ+ +K A+ T A W IRVN +APGP+ T S L E +
Sbjct: 134 ATGYQL----SKEALILWTMRQAQPWFGARGIRVNCVAPGPV-FTPILGDFRSMLGQERV 188
Query: 218 RSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN 262
S A M + + A ++L SDA +++NG L VDGG
Sbjct: 189 DSDAKR-MGRPATAD--EQAAVLVFLCSDAARWINGVNLPVDGGL 230
|
Length = 241 |
| >gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 45.3 bits (108), Expect = 1e-05
Identities = 50/201 (24%), Positives = 81/201 (40%), Gaps = 24/201 (11%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK---TVLRSAVAALHSLGIPAIGLEGD 69
+ L+TG SG+G ++ + G +A+ RR L++ + A + GI D
Sbjct: 3 QKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYP-GIKVAVAALD 61
Query: 70 VRKREDAVRVVESTINHFGKLD-ILVNAAAGNFLVPAEDLSPNGF---RTVIEIDSVGTF 125
V + V + G LD ++VNA G L F + E + V
Sbjct: 62 VNDHDQVFEVFAEFRDELGGLDRVIVNAGIGK----GARLGTGKFWANKATAETNFVAAL 117
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISAT--LHYTATWYQIHVSAAKAAVDSITRSL 183
C A++ ++ G G +I ++SA L Y +A+KA V S+ L
Sbjct: 118 AQCEAAMEIFREQGSGHLV-----LISSVSAVRGLPGVKAAY----AASKAGVASLGEGL 168
Query: 184 ALEWGTDYAIRVNGIAPGPIK 204
E I+V+ I PG I+
Sbjct: 169 RAE-LAKTPIKVSTIEPGYIR 188
|
Length = 248 |
| >gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 1e-05
Identities = 45/210 (21%), Positives = 86/210 (40%), Gaps = 16/210 (7%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVR 71
K +TG SGIG +L+L GA + + R L VA +LG D+
Sbjct: 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDIS 60
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
+ G +D+++N A + + L+ +R +++++ +G +
Sbjct: 61 DYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETF 120
Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
+ + GR GG ++N+S+ A + SA+K + ++ L + +
Sbjct: 121 VPPMVAAGR-------GGHLVNVSSAAGLVALPWHAAYSASKFGLRGLSEVLRFDLAR-H 172
Query: 192 AIRVNGIAPGPIK-------DTAGVSKLAP 214
I V+ + PG +K + AGV + P
Sbjct: 173 GIGVSVVVPGAVKTPLVNTVEIAGVDREDP 202
|
Length = 272 |
| >gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 44.9 bits (107), Expect = 2e-05
Identities = 49/193 (25%), Positives = 80/193 (41%), Gaps = 19/193 (9%)
Query: 17 LTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDA 76
+TG SGIG ++ + + GA + ++ RR L++ A L ++ DVR +
Sbjct: 7 ITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSV-YAADVRDADAL 65
Query: 77 VRVVESTINHFGKLDILV-NA--AAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALK 133
I G D+++ NA + G EDL+ FR V++ + G +
Sbjct: 66 AAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLA--VFREVMDTNYFGMVATFQPFIA 123
Query: 134 YLKKGGRGQ--ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
++ RG +S G+ L + SA+KAA SL +E
Sbjct: 124 PMRAARRGTLVGIASVAGV-----RGLPGAGAY-----SASKAAAIKYLESLRVELR-PA 172
Query: 192 AIRVNGIAPGPIK 204
+RV IAPG I+
Sbjct: 173 GVRVVTIAPGYIR 185
|
Length = 257 |
| >gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 2e-05
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 22/155 (14%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
GK ++TG +GIG E + +L + GA + IM R + + AA I L +V
Sbjct: 1 GKTVIITGANTGIGKETARELARRGARV-IMACRD-MAKCEEAAAE---IRRDTLNHEVI 55
Query: 72 KRE------DAVR-VVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT 124
R ++R + +LD+L+N AG P + +GF ++ +G
Sbjct: 56 VRHLDLASLKSIRAFAAEFLAEEDRLDVLIN-NAGVMRCP-YSKTEDGFEMQFGVNHLGH 113
Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159
F++ + L LKK S+ I+N+S+ H
Sbjct: 114 FLLTNLLLDLLKK--------SAPSRIVNVSSLAH 140
|
Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274 |
| >gnl|CDD|236124 PRK07889, PRK07889, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 5e-05
Identities = 59/213 (27%), Positives = 91/213 (42%), Gaps = 35/213 (16%)
Query: 9 ILKGKVALLTG--GGSGIGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAALHSLGIPAI 64
+L+GK L+TG S I F ++ + GA + + GR + L PA
Sbjct: 4 LLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAK---RLPEPAP 60
Query: 65 GLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFL-VPAEDLSPNGFRT 115
LE DV E + + H LD +V++ GNFL P ED++ T
Sbjct: 61 VLELDVTNEEHLASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVA-----T 115
Query: 116 VIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-TWYQIHVSAAKA 174
+ + + +LK L K + + ++ AT+ + A W + AKA
Sbjct: 116 ALHVSAY--------SLKSLAKALLPLMNEGGSIVGLDFDATVAWPAYDW----MGVAKA 163
Query: 175 AVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 207
A++S R LA + G IRVN +A GPI+ A
Sbjct: 164 ALESTNRYLARDLGPR-GIRVNLVAAGPIRTLA 195
|
Length = 256 |
| >gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 43.3 bits (102), Expect = 6e-05
Identities = 42/193 (21%), Positives = 70/193 (36%), Gaps = 15/193 (7%)
Query: 74 EDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
+ +V++ + G +D+LV N + P + S R E S+ F + A+
Sbjct: 57 QKPEELVDAVLQAGGAIDVLVSNDYIPRPMNPIDGTSEADIRQAFEALSIFPFALLQAAI 116
Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
+KK G G II SA + ++ A+AA ++ SLA E
Sbjct: 117 AQMKKAG-------GGSIIFITSAVPKKPLAYNSLY-GPARAAAVALAESLAKELS-RDN 167
Query: 193 IRVNGIAPGPIKDT----AGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
I V I P + P E+R + + + G ++ +LAS
Sbjct: 168 ILVYAIGPNFFNSPTYFPTSDWENNP-ELRERVKRDVPLGRLGRPDEMGALVAFLASRRA 226
Query: 249 KYVNGNTLIVDGG 261
+ G GG
Sbjct: 227 DPITGQFFAFAGG 239
|
Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242 |
| >gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs | Back alignment and domain information |
|---|
Score = 43.0 bits (101), Expect = 8e-05
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 10/121 (8%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL----HSLGIPAIGLE 67
GKV ++TG SGIGFE + HGA + + R + +AV+ + H + A+ L+
Sbjct: 1 GKVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTLD 60
Query: 68 -GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
+R + ++ + L +LV A F +P L+ +G T +++ +G F
Sbjct: 61 LASLRSVQRFAEAFKAKNSP---LHVLV-CNAAVFALPWT-LTEDGLETTFQVNHLGHFY 115
Query: 127 M 127
+
Sbjct: 116 L 116
|
Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284 |
| >gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 9e-05
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 18/194 (9%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
+ L+TG SGIG + L G + R++ VAAL + G+ A L D +
Sbjct: 5 RSILITGCSSGIGAYCARALQSDGWRVFATCRKE----EDVAALEAEGLEAFQL--DYAE 58
Query: 73 REDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
E +V + G+LD L N A EDL R E + G +
Sbjct: 59 PESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRV 118
Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW-GTD 190
+ ++K G+G+ I+ S+ L Y+ +A+K A++ ++ +L +E G+
Sbjct: 119 IPVMRKQGQGR--------IVQCSSILGLVPMKYRGAYNASKFAIEGLSLTLRMELQGSG 170
Query: 191 YAIRVNGIAPGPIK 204
I V+ I PGPI+
Sbjct: 171 --IHVSLIEPGPIE 182
|
Length = 277 |
| >gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 42.9 bits (101), Expect = 1e-04
Identities = 51/191 (26%), Positives = 79/191 (41%), Gaps = 16/191 (8%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
V L+TG SGIG ++ G + R+ V AL + G A+ L DV
Sbjct: 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKA----EDVEALAAAGFTAVQL--DVND 55
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
R+ E G LD+L+N A + P D R E + V + AL
Sbjct: 56 GAALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETN-VFAVVGVTRAL 114
Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
L + R G+++NI + T + A+KAAV +++ +L LE +
Sbjct: 115 FPLLRRSR--------GLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLELAP-FG 165
Query: 193 IRVNGIAPGPI 203
++V + PG I
Sbjct: 166 VQVMEVQPGAI 176
|
Length = 274 |
| >gnl|CDD|169553 PRK08690, PRK08690, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 1e-04
Identities = 65/274 (23%), Positives = 111/274 (40%), Gaps = 33/274 (12%)
Query: 10 LKGKVALLTG--GGSGIGFEISLQLGKHGAAIA---IMGRRKTVLRSAVAALHSLGIPAI 64
L+GK L+TG I + I+ + GA +A ++ + + +R A L S +
Sbjct: 4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDS----EL 59
Query: 65 GLEGDVRKREDAVRVVESTINHFGKLDILVN--------AAAGNFLVPAEDLSPNGFRTV 116
DV ++ +V H+ LD LV+ A +G+FL + +S F T
Sbjct: 60 VFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFL---DSISREAFNTA 116
Query: 117 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 176
EI + + +A + + +G + S + + A +Y + AKA++
Sbjct: 117 HEISAY-SLPALAKAARPMMRGRNSAIVALS--YLGAVRAIPNYNV------MGMAKASL 167
Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
++ R A G + IR NGI+ GPIK A ++ + + ++
Sbjct: 168 EAGIRFTAACLGKE-GIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVTIEEV 226
Query: 237 AMAALYLASDAGKYVNGNTLIVDGG---NWLSNP 267
A +L SD + G VDGG N LS
Sbjct: 227 GNTAAFLLSDLSSGITGEITYVDGGYSINALSTE 260
|
Length = 261 |
| >gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 42.5 bits (100), Expect = 1e-04
Identities = 55/262 (20%), Positives = 109/262 (41%), Gaps = 31/262 (11%)
Query: 16 LLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKRE 74
L+T GIGF ++ +L K GA + I R + L A+ L G + A+ + D+ ++
Sbjct: 4 LVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAV--KADLSDKD 61
Query: 75 DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT----FIMCHE 130
D +V+ G +D LV AGN L G+ +E + ++
Sbjct: 62 DLKNLVKEAWELLGGIDALV-WNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLL 120
Query: 131 ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTD 190
+L+K + G+++ +S+ + +A + + + ++ +G
Sbjct: 121 IQAWLEKKMK--------GVLVYLSSVSVKEPMPPLVLADVTRAGLVQLAKGVSRTYGG- 171
Query: 191 YAIRVNGIAPGPIKDTAG----VSKLA------PEEIRSKATDYMAAYKFGEKWDIAMAA 240
IR + G DT G ++++A EE + K +W+ + +
Sbjct: 172 KGIRAYTVLLGSF-DTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWE-ELGS 229
Query: 241 L--YLASDAGKYVNGNTLIVDG 260
L +L S+ +Y+ G+T++ DG
Sbjct: 230 LIAFLLSENAEYMLGSTIVFDG 251
|
Length = 259 |
| >gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 1e-04
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 11/158 (6%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH--SLGIPAIGLEGD 69
K +TG SG G ++ +L G +A RR L + A + L + L+ D
Sbjct: 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDD-LKARYGDRLWV----LQLD 56
Query: 70 VRKREDAVR-VVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
V AVR VV+ G++D++V+ A AE+LS R I+ + +G+ +
Sbjct: 57 VTD-SAAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVI 115
Query: 129 HEALKYLKK--GGRGQASSSSGGIIINISATLHYTATW 164
AL +L++ GGR SS GG I +L++ W
Sbjct: 116 RAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKW 153
|
Length = 276 |
| >gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 2e-04
Identities = 49/208 (23%), Positives = 80/208 (38%), Gaps = 25/208 (12%)
Query: 14 VALLTGGGSGIGFEISLQLGK----HGAAIAIMGRRKTVLRSAVAALHS----LGIPAIG 65
V L+TG G G I+ +L K G+ + + R LR A + + L + +
Sbjct: 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVS 61
Query: 66 LE-GDVRKREDAVRVVESTI--NHFGKLDILVNAAA-GNFLVPAEDLSPNGFRTVIEIDS 121
L+ G E ++ + +L ++ NA G+ DLS + +
Sbjct: 62 LDLGAEAGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALN 121
Query: 122 VGTFI-MCHEALKYLKKGGRGQASSSSGGIIINIS--ATLHYTATWYQIHVSAAKAAVDS 178
+ + + + LK K S ++NIS + W A KAA D
Sbjct: 122 LTSMLCLTSSVLKAFKD------SPGLNRTVVNISSLCAIQPFKGW--ALYCAGKAARDM 173
Query: 179 ITRSLALEWGTDYAIRVNGIAPGPIKDT 206
+ + LALE +RV APG + DT
Sbjct: 174 LFQVLALEEKNP-NVRVLNYAPGVL-DT 199
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256 |
| >gnl|CDD|236229 PRK08303, PRK08303, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 2e-04
Identities = 58/197 (29%), Positives = 87/197 (44%), Gaps = 30/197 (15%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR----------RKTVLRSAVAALHSL 59
L+GKVAL+ G G G I+++LG GA + + GR R + + +
Sbjct: 6 LRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAA 65
Query: 60 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG-----NFLVPAEDLS-PNGF 113
G I ++ D E +VE G+LDILVN G + P + S G
Sbjct: 66 GGRGIAVQVDHLVPEQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGL 125
Query: 114 RTV-IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS-ATLHYTATWYQIHV-- 169
R + + ID+ I H AL L + GG+++ I+ T Y AT Y++ V
Sbjct: 126 RMLRLAIDT--HLITSHFALPLLIR--------RPGGLVVEITDGTAEYNATHYRLSVFY 175
Query: 170 SAAKAAVDSITRSLALE 186
AK +V+ + SLA E
Sbjct: 176 DLAKTSVNRLAFSLAHE 192
|
Length = 305 |
| >gnl|CDD|235694 PRK06079, PRK06079, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 4e-04
Identities = 54/207 (26%), Positives = 82/207 (39%), Gaps = 29/207 (14%)
Query: 66 LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAE------DLSPNGFRTVIEI 119
+E DV E R + GK+D +V+A A + E D S +G+ +I
Sbjct: 60 VECDVASDESIERAFATIKERVGKIDGIVHAIA--YAKKEELGGNVTDTSRDGYALAQDI 117
Query: 120 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH----VSAAKAA 175
+ + A L G I+ TL Y + I + AKAA
Sbjct: 118 SAYSLIAVAKYARPLLNPGA---------SIV-----TLTYFGSERAIPNYNVMGIAKAA 163
Query: 176 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 235
++S R LA + G IRVN I+ G +K T V+ + + K +D G +
Sbjct: 164 LESSVRYLARDLG-KKGIRVNAISAGAVK-TLAVTGIKGHKDLLKESDSRTVDGVGVTIE 221
Query: 236 -IAMAALYLASDAGKYVNGNTLIVDGG 261
+ A +L SD V G+ + VD G
Sbjct: 222 EVGNTAAFLLSDLSTGVTGDIIYVDKG 248
|
Length = 252 |
| >gnl|CDD|168626 PRK06603, PRK06603, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 8e-04
Identities = 66/260 (25%), Positives = 109/260 (41%), Gaps = 20/260 (7%)
Query: 9 ILKGKVALLTG--GGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGL 66
+L+GK L+TG I + I+ KHGA + + + + + +G +
Sbjct: 5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVS- 63
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
E DV + + + +G D L++ A +L T +E I
Sbjct: 64 ELDVTNPKSISNLFDDIKEKWGSFDFLLHGMA---FADKNELKGRYVDTSLENFHNSLHI 120
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW----YQIHVSAAKAAVDSITRS 182
C+ L+ + +A GG I+ ++ +Y A Y + + AKAA+++ +
Sbjct: 121 SCYSLLELSRSA---EALMHDGGSIVTLT---YYGAEKVIPNYNV-MGVAKAALEASVKY 173
Query: 183 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE-KWDIAMAAL 241
LA + G + IRVN I+ GPIK A S + K+ A K + D+ AA+
Sbjct: 174 LANDMGEN-NIRVNAISAGPIKTLAS-SAIGDFSTMLKSHAATAPLKRNTTQEDVGGAAV 231
Query: 242 YLASDAGKYVNGNTLIVDGG 261
YL S+ K V G VD G
Sbjct: 232 YLFSELSKGVTGEIHYVDCG 251
|
Length = 260 |
| >gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.001
Identities = 54/225 (24%), Positives = 87/225 (38%), Gaps = 44/225 (19%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEG---- 68
K L+TG SG G ++ +L G TVL + + G A L
Sbjct: 1 KAVLITGCDSGFGNLLAKKLDSLGF---------TVL-AGCLTKNGPG--AKELRRVCSD 48
Query: 69 -------DVRKREDAVRVVESTINHFGKLDI--LVN-AAAGNFLVPAEDLSPNGFRTVIE 118
DV K E R + H G+ + LVN A F E L + +R +E
Sbjct: 49 RLRTLQLDVTKPEQIKRAAQWVKEHVGEKGLWGLVNNAGILGFGGDEELLPMDDYRKCME 108
Query: 119 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDS 178
++ GT + L L++ + G ++N+S+ A+KAAV++
Sbjct: 109 VNLFGTVEVTKAFLPLLRR---------AKGRVVNVSSMGGRVPFPAGGAYCASKAAVEA 159
Query: 179 ITRSLALE---WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK 220
+ SL E WG ++V+ I PG K G++ + +
Sbjct: 160 FSDSLRRELQPWG----VKVSIIEPGNFK--TGITGNSELWEKQA 198
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281 |
| >gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 38.1 bits (89), Expect = 0.003
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 37/202 (18%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHG----AAIAIMGRRKTVLRSAVAALHSLGIPAIGLE 67
K L+TG GSG G E++L+L + G A + I + T LR+ A L + L
Sbjct: 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAP-QVTALRAEAARR-GLALRVEKL- 58
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAA----AGNFL-VPAEDLSPNGFRTVIEIDSV 122
D+ D + E + D+L+N A AG + +P E + R + E +
Sbjct: 59 -DLTDAIDRAQAAEWDV------DVLLNNAGIGEAGAVVDIPVELV-----RELFETNVF 106
Query: 123 GTFIMCHEALKYLKKGGRGQA--SSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
G + ++ + G+G+ +SS G+I T +T + A+K A+++I
Sbjct: 107 GPLELTQGFVRKMVARGKGKVVFTSSMAGLI-----TGPFTGAY-----CASKHALEAIA 156
Query: 181 RSLALEWGTDYAIRVNGIAPGP 202
++ E + I+V + PGP
Sbjct: 157 EAMHAEL-KPFGIQVATVNPGP 177
|
Length = 257 |
| >gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 37.5 bits (87), Expect = 0.004
Identities = 40/173 (23%), Positives = 62/173 (35%), Gaps = 19/173 (10%)
Query: 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRE 74
AL+ G GIG ++ L G + + GR L A + +L PA
Sbjct: 1 ALILGATGGIGRALARALAGRGWRLLLSGRDAGALAGLAAEVGALARPA---------DV 51
Query: 75 DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 134
A V + G LD+LV AA P P +R +++ + G ++ AL
Sbjct: 52 AAELEVWALAQELGPLDLLVYAAGAILGKPLARTKPAAWRRILDANLTGAALVLKHALAL 111
Query: 135 LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
L G R + + A +AAKAA+++ E
Sbjct: 112 LAAGARL----------VFLGAYPELVMLPGLSAYAAAKAALEAYVEVARKEV 154
|
Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 298 | |||
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 100.0 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 100.0 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 100.0 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 100.0 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 100.0 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 100.0 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 100.0 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 100.0 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 100.0 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 100.0 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 100.0 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 100.0 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 100.0 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 100.0 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 100.0 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 100.0 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 100.0 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 100.0 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 100.0 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 100.0 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 100.0 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 100.0 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 100.0 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 100.0 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 100.0 | |
| PRK08643 | 256 | acetoin reductase; Validated | 100.0 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 100.0 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 100.0 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 100.0 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 100.0 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 100.0 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 100.0 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 100.0 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 100.0 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 100.0 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 100.0 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 100.0 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 100.0 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 100.0 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 100.0 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 100.0 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 100.0 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05717 | 255 | oxidoreductase; Validated | 100.0 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 100.0 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 100.0 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 100.0 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 100.0 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 100.0 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 100.0 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 100.0 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 100.0 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 100.0 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 100.0 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 100.0 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 100.0 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 100.0 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 100.0 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 100.0 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 100.0 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 100.0 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PLN00015 | 308 | protochlorophyllide reductase | 100.0 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 100.0 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 100.0 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 100.0 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 100.0 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 100.0 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 100.0 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 100.0 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 100.0 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 100.0 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 100.0 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 100.0 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 100.0 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 100.0 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 100.0 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 100.0 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 100.0 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 100.0 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 100.0 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 100.0 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 100.0 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 100.0 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 100.0 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 100.0 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 100.0 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 100.0 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 100.0 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 99.98 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.97 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 99.97 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 99.97 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.97 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 99.97 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.97 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.97 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 99.96 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.96 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.96 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 99.95 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.94 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 99.94 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.92 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.91 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 99.91 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.91 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.9 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 99.89 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.88 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 99.87 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.86 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.86 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 99.85 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.85 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.85 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.84 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.83 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.83 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.83 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.82 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.82 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.81 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.81 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.81 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.8 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.79 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.79 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.79 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.79 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.76 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.76 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 99.76 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.75 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.74 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.74 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.74 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.73 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.7 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.69 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.69 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.69 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.69 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.67 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.66 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.66 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.65 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.65 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.63 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.62 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.62 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.61 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.6 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.57 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.52 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.51 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.49 | |
| KOG4022 | 236 | consensus Dihydropteridine reductase DHPR/QDPR [Am | 99.48 | |
| PF08643 | 299 | DUF1776: Fungal family of unknown function (DUF177 | 99.45 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.44 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.42 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.4 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.34 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.33 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.32 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.31 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.29 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.28 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 99.26 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.26 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.25 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.25 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 99.24 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.23 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.23 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.23 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.23 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 99.2 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.16 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.14 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 99.1 | |
| COG4982 | 866 | 3-oxoacyl-[acyl-carrier protein] | 98.91 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 98.9 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 98.82 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 98.79 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 98.79 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 98.78 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 98.7 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 98.64 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 98.64 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 98.59 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 98.57 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 98.54 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 98.42 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 98.23 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 98.13 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 98.13 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 98.1 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 98.09 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 98.03 | |
| PLN00106 | 323 | malate dehydrogenase | 98.02 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 98.01 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 97.98 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 97.96 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 97.9 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 97.72 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.71 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 97.7 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 97.67 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 97.62 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 97.55 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 97.52 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 97.51 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 97.4 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 97.34 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 97.31 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 97.31 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 97.23 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 97.21 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 97.2 | |
| PLN02520 | 529 | bifunctional 3-dehydroquinate dehydratase/shikimat | 97.18 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 97.14 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 97.14 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 97.13 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 97.11 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 97.07 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 97.03 | |
| PRK13982 | 475 | bifunctional SbtC-like/phosphopantothenoylcysteine | 97.03 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 96.98 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 96.95 | |
| PRK09310 | 477 | aroDE bifunctional 3-dehydroquinate dehydratase/sh | 96.94 | |
| PRK14968 | 188 | putative methyltransferase; Provisional | 96.88 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 96.87 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 96.85 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 96.84 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 96.82 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 96.78 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.74 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 96.73 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 96.73 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 96.7 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 96.69 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 96.69 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 96.69 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 96.68 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 96.66 | |
| cd05276 | 323 | p53_inducible_oxidoreductase PIG3 p53-inducible qu | 96.64 | |
| PF12242 | 78 | Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2 | 96.64 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 96.63 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 96.62 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.62 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 96.61 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 96.6 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 96.56 | |
| TIGR00561 | 511 | pntA NAD(P) transhydrogenase, alpha subunit. In so | 96.54 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 96.52 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 96.52 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 96.51 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 96.47 | |
| COG3007 | 398 | Uncharacterized paraquat-inducible protein B [Func | 96.46 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 96.44 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 96.41 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 96.4 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 96.4 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 96.37 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 96.34 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 96.34 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 96.32 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 96.29 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 96.26 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 96.22 | |
| cd05212 | 140 | NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom | 96.16 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 96.1 | |
| PRK13403 | 335 | ketol-acid reductoisomerase; Provisional | 96.09 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 96.08 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 96.06 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.04 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 96.02 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 96.02 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 96.0 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 95.98 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 95.93 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 95.92 | |
| TIGR02824 | 325 | quinone_pig3 putative NAD(P)H quinone oxidoreducta | 95.91 | |
| PLN02928 | 347 | oxidoreductase family protein | 95.88 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 95.85 | |
| cd05288 | 329 | PGDH Prostaglandin dehydrogenases. Prostaglandins | 95.84 | |
| PRK04308 | 445 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.84 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.83 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 95.81 | |
| PF02882 | 160 | THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl | 95.8 | |
| cd08268 | 328 | MDR2 Medium chain dehydrogenases/reductase (MDR)/z | 95.77 | |
| cd00401 | 413 | AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado | 95.73 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 95.72 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 95.72 | |
| PRK14191 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.68 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 95.57 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 95.57 | |
| cd05191 | 86 | NAD_bind_amino_acid_DH NAD(P) binding domain of am | 95.56 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 95.55 | |
| PTZ00082 | 321 | L-lactate dehydrogenase; Provisional | 95.49 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 95.49 | |
| cd08239 | 339 | THR_DH_like L-threonine dehydrogenase (TDH)-like. | 95.49 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 95.45 | |
| TIGR02818 | 368 | adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr | 95.41 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 95.41 | |
| PRK12480 | 330 | D-lactate dehydrogenase; Provisional | 95.4 | |
| PF02737 | 180 | 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind | 95.39 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 95.37 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 95.35 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 95.35 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 95.33 | |
| TIGR01724 | 341 | hmd_rel H2-forming N(5),N(10)-methenyltetrahydrome | 95.33 | |
| PRK14188 | 296 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.31 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 95.27 | |
| PF12076 | 164 | Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194 | 95.27 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 95.26 | |
| PF13241 | 103 | NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ | 95.24 | |
| cd08238 | 410 | sorbose_phosphate_red L-sorbose-1-phosphate reduct | 95.22 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 95.19 | |
| cd08244 | 324 | MDR_enoyl_red Possible enoyl reductase. Member ide | 95.19 | |
| cd08290 | 341 | ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi | 95.19 | |
| PRK14189 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.16 | |
| PLN03139 | 386 | formate dehydrogenase; Provisional | 95.15 | |
| PTZ00075 | 476 | Adenosylhomocysteinase; Provisional | 95.14 | |
| PLN02740 | 381 | Alcohol dehydrogenase-like | 95.13 | |
| cd05311 | 226 | NAD_bind_2_malic_enz NAD(P) binding domain of mali | 95.1 | |
| cd08300 | 368 | alcohol_DH_class_III class III alcohol dehydrogena | 95.1 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 95.09 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 95.08 | |
| PRK10792 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.07 | |
| PRK14183 | 281 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.06 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 95.06 | |
| PRK08223 | 287 | hypothetical protein; Validated | 95.05 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 95.04 | |
| cd01489 | 312 | Uba2_SUMO Ubiquitin activating enzyme (E1) subunit | 95.03 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 94.99 | |
| PRK14179 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.96 | |
| PRK05479 | 330 | ketol-acid reductoisomerase; Provisional | 94.96 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 94.95 | |
| KOG0025 | 354 | consensus Zn2+-binding dehydrogenase (nuclear rece | 94.94 | |
| PRK14172 | 278 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.93 | |
| PRK14190 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.92 | |
| PRK14177 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.91 | |
| PRK14176 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.88 | |
| PRK12550 | 272 | shikimate 5-dehydrogenase; Reviewed | 94.86 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 94.85 | |
| cd08289 | 326 | MDR_yhfp_like Yhfp putative quinone oxidoreductase | 94.85 | |
| COG2130 | 340 | Putative NADP-dependent oxidoreductases [General f | 94.82 | |
| PRK14173 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.8 | |
| PRK14180 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.78 | |
| COG2263 | 198 | Predicted RNA methylase [Translation, ribosomal st | 94.74 | |
| cd08292 | 324 | ETR_like_2 2-enoyl thioester reductase (ETR) like | 94.72 | |
| cd08250 | 329 | Mgc45594_like Mgc45594 gene product and other MDR | 94.71 | |
| PRK14170 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.7 | |
| TIGR03201 | 349 | dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co | 94.69 | |
| cd08241 | 323 | QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t | 94.68 | |
| cd00300 | 300 | LDH_like L-lactate dehydrogenase-like enzymes. Mem | 94.67 | |
| PRK14186 | 297 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.66 | |
| TIGR02819 | 393 | fdhA_non_GSH formaldehyde dehydrogenase, glutathio | 94.64 | |
| PRK14169 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.62 | |
| PRK14171 | 288 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.61 | |
| PLN02602 | 350 | lactate dehydrogenase | 94.61 | |
| cd05290 | 307 | LDH_3 A subgroup of L-lactate dehydrogenases. L-la | 94.59 | |
| cd08301 | 369 | alcohol_DH_plants Plant alcohol dehydrogenase. NAD | 94.59 | |
| PRK14851 | 679 | hypothetical protein; Provisional | 94.58 | |
| COG1052 | 324 | LdhA Lactate dehydrogenase and related dehydrogena | 94.57 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 94.53 | |
| PLN02586 | 360 | probable cinnamyl alcohol dehydrogenase | 94.53 | |
| cd05211 | 217 | NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of | 94.51 | |
| TIGR03451 | 358 | mycoS_dep_FDH mycothiol-dependent formaldehyde deh | 94.51 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 94.51 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 94.49 | |
| cd08243 | 320 | quinone_oxidoreductase_like_1 Quinone oxidoreducta | 94.49 | |
| PLN02775 | 286 | Probable dihydrodipicolinate reductase | 94.48 | |
| cd08291 | 324 | ETR_like_1 2-enoyl thioester reductase (ETR) like | 94.46 | |
| cd08281 | 371 | liver_ADH_like1 Zinc-dependent alcohol dehydrogena | 94.46 | |
| PLN02516 | 299 | methylenetetrahydrofolate dehydrogenase (NADP+) | 94.45 | |
| cd08230 | 355 | glucose_DH Glucose dehydrogenase. Glucose dehydrog | 94.45 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 94.43 | |
| PLN02178 | 375 | cinnamyl-alcohol dehydrogenase | 94.42 | |
| PLN02306 | 386 | hydroxypyruvate reductase | 94.4 | |
| PRK14187 | 294 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.38 | |
| cd01076 | 227 | NAD_bind_1_Glu_DH NAD(P) binding domain of glutama | 94.37 | |
| cd05282 | 323 | ETR_like 2-enoyl thioester reductase-like. 2-enoyl | 94.36 | |
| PTZ00354 | 334 | alcohol dehydrogenase; Provisional | 94.36 | |
| TIGR00537 | 179 | hemK_rel_arch HemK-related putative methylase. The | 94.36 | |
| PRK14166 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.35 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 94.34 |
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-48 Score=304.01 Aligned_cols=245 Identities=29% Similarity=0.381 Sum_probs=223.9
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
.+..|+++||||++|||++++..|+++|++|++++++....++++..+...+ +...+.||+++.++++.++++..+.+|
T Consensus 11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~-~h~aF~~DVS~a~~v~~~l~e~~k~~g 89 (256)
T KOG1200|consen 11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYG-DHSAFSCDVSKAHDVQNTLEEMEKSLG 89 (256)
T ss_pred HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCC-ccceeeeccCcHHHHHHHHHHHHHhcC
Confidence 4667999999999999999999999999999999999988888888776553 455678999999999999999999999
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchh
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~ 168 (298)
+++++|||||+.....+..+..++|.+.+.+|+.|.|+.+|++...|...... +.+||||||+.+..+..++..
T Consensus 90 ~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~------~~sIiNvsSIVGkiGN~GQtn 163 (256)
T KOG1200|consen 90 TPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQ------GLSIINVSSIVGKIGNFGQTN 163 (256)
T ss_pred CCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCC------CceEEeehhhhcccccccchh
Confidence 99999999999988888888999999999999999999999999986554321 469999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCC
Q 022386 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (298)
Q Consensus 169 Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~ 248 (298)
|+++|+++.+|++++++|++ .+|||||.|.||++.|||... .++....++...+|+++++++||+|+.+.||+|+.+
T Consensus 164 YAAsK~GvIgftktaArEla-~knIrvN~VlPGFI~tpMT~~--mp~~v~~ki~~~iPmgr~G~~EevA~~V~fLAS~~s 240 (256)
T KOG1200|consen 164 YAASKGGVIGFTKTAARELA-RKNIRVNVVLPGFIATPMTEA--MPPKVLDKILGMIPMGRLGEAEEVANLVLFLASDAS 240 (256)
T ss_pred hhhhcCceeeeeHHHHHHHh-hcCceEeEeccccccChhhhh--cCHHHHHHHHccCCccccCCHHHHHHHHHHHhcccc
Confidence 99999999999999999998 889999999999999987544 357778889999999999999999999999999999
Q ss_pred CCccccEEEeCCCCC
Q 022386 249 KYVNGNTLIVDGGNW 263 (298)
Q Consensus 249 ~~~~G~~i~~dgG~~ 263 (298)
+|+||+.+.++||..
T Consensus 241 sYiTG~t~evtGGl~ 255 (256)
T KOG1200|consen 241 SYITGTTLEVTGGLA 255 (256)
T ss_pred ccccceeEEEecccc
Confidence 999999999999975
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-47 Score=326.36 Aligned_cols=251 Identities=25% Similarity=0.337 Sum_probs=222.4
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC-CCCeEEEEccCCCHHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
|.+.+|+||+++||||++|||+++|+.|+++|++|++++|+.+.+++..+++.+. +.++.++.+|++|+++++++++++
T Consensus 1 ~~~~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~ 80 (263)
T PRK08339 1 MLKIDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKEL 80 (263)
T ss_pred CCccCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 4566799999999999999999999999999999999999988888888777654 557889999999999999999998
Q ss_pred HHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
. +++++|++|||||.....++.+.+.++|++.+++|+.++++++++++|+|++++ .|+||++||..+..+.
T Consensus 81 ~-~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~--------~g~Ii~isS~~~~~~~ 151 (263)
T PRK08339 81 K-NIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG--------FGRIIYSTSVAIKEPI 151 (263)
T ss_pred H-hhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--------CCEEEEEcCccccCCC
Confidence 5 589999999999987667788899999999999999999999999999998765 6899999999998888
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc---------CChHHHHHHHhhhccCCCCCCHH
Q 022386 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK---------LAPEEIRSKATDYMAAYKFGEKW 234 (298)
Q Consensus 164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~ 234 (298)
+....|+++|+|+.+|+++++.|++ ++|||||+|+||+++|++.... ...++..+.+....|.+++.+|+
T Consensus 152 ~~~~~y~asKaal~~l~~~la~el~-~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~ 230 (263)
T PRK08339 152 PNIALSNVVRISMAGLVRTLAKELG-PKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPE 230 (263)
T ss_pred CcchhhHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHH
Confidence 8889999999999999999999998 8899999999999999864321 11233344555667899999999
Q ss_pred HHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 235 DIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 235 dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
|+++++.||+++.+.++||+.+.+|||...+
T Consensus 231 dva~~v~fL~s~~~~~itG~~~~vdgG~~~~ 261 (263)
T PRK08339 231 EIGYLVAFLASDLGSYINGAMIPVDGGRLNS 261 (263)
T ss_pred HHHHHHHHHhcchhcCccCceEEECCCcccc
Confidence 9999999999999999999999999997654
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-46 Score=320.27 Aligned_cols=247 Identities=31% Similarity=0.426 Sum_probs=216.8
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
+.+|+||+++||||++|||++++++|+++|++|++++|+.. ++..+.+...+.++.++.+|++++++++++++++.+.
T Consensus 3 ~~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (251)
T PRK12481 3 LFDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEV 80 (251)
T ss_pred CcccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999988642 4455556666778899999999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
++++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|.+++. +|+||++||..+..+.+..
T Consensus 81 ~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~-------~g~ii~isS~~~~~~~~~~ 153 (251)
T PRK12481 81 MGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGN-------GGKIINIASMLSFQGGIRV 153 (251)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCC-------CCEEEEeCChhhcCCCCCC
Confidence 999999999999877777888899999999999999999999999999986531 4899999999998888888
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
..|++||+|++.++++++.|++ ++|||||+|+||+++|++.......+...+......|.+++.+|+|+++++.||+++
T Consensus 154 ~~Y~asK~a~~~l~~~la~e~~-~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~peeva~~~~~L~s~ 232 (251)
T PRK12481 154 PSYTASKSAVMGLTRALATELS-QYNINVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFLSSS 232 (251)
T ss_pred cchHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 9999999999999999999998 889999999999999986543222233334445667889999999999999999999
Q ss_pred CCCCccccEEEeCCCCC
Q 022386 247 AGKYVNGNTLIVDGGNW 263 (298)
Q Consensus 247 ~~~~~~G~~i~~dgG~~ 263 (298)
.+.+++|+.|.+|||..
T Consensus 233 ~~~~~~G~~i~vdgg~~ 249 (251)
T PRK12481 233 ASDYVTGYTLAVDGGWL 249 (251)
T ss_pred cccCcCCceEEECCCEe
Confidence 99999999999999964
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-46 Score=320.28 Aligned_cols=242 Identities=23% Similarity=0.248 Sum_probs=210.3
Q ss_pred CCCCcEEEEecCC--chhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 9 ILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 9 ~l~gk~~lVtG~t--~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.|+||+++||||+ +|||+++|++|+++|++|++++|+. +.++..+++. +.++.+++||++|+++++++++++.++
T Consensus 4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 80 (252)
T PRK06079 4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV--DEEDLLVECDVASDESIERAFATIKER 80 (252)
T ss_pred ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc--cCceeEEeCCCCCHHHHHHHHHHHHHH
Confidence 4789999999999 8999999999999999999999983 4444444443 245788999999999999999999999
Q ss_pred hCCccEEEECCCCCCC----CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC
Q 022386 87 FGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (298)
Q Consensus 87 ~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~ 162 (298)
++++|++|||||.... +++.+.+.++|+..+++|+.+++++++.++|+|.+ +|+||+++|..+..+
T Consensus 81 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~----------~g~Iv~iss~~~~~~ 150 (252)
T PRK06079 81 VGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP----------GASIVTLTYFGSERA 150 (252)
T ss_pred hCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc----------CceEEEEeccCcccc
Confidence 9999999999997542 57778899999999999999999999999999963 478999999999888
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHH
Q 022386 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (298)
Q Consensus 163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 242 (298)
.+.+..|++||+|+.+|+++++.|++ ++|||||+|+||+|+|++.......++..+......|.+++.+|+|+++++.|
T Consensus 151 ~~~~~~Y~asKaal~~l~~~la~el~-~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~ 229 (252)
T PRK06079 151 IPNYNVMGIAKAALESSVRYLARDLG-KKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVDGVGVTIEEVGNTAAF 229 (252)
T ss_pred CCcchhhHHHHHHHHHHHHHHHHHhh-hcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcccCCCCHHHHHHHHHH
Confidence 88889999999999999999999998 78999999999999998653332334444555566788999999999999999
Q ss_pred hcCCCCCCccccEEEeCCCCCC
Q 022386 243 LASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 243 L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
|+++.+.+++|+++.+|||..+
T Consensus 230 l~s~~~~~itG~~i~vdgg~~~ 251 (252)
T PRK06079 230 LLSDLSTGVTGDIIYVDKGVHL 251 (252)
T ss_pred HhCcccccccccEEEeCCceec
Confidence 9999999999999999999653
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-46 Score=322.34 Aligned_cols=247 Identities=25% Similarity=0.293 Sum_probs=208.1
Q ss_pred CCCCCCcEEEEecCCc--hhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~--giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
++.|+||++|||||++ |||+++|++|+++|++|++++|+....+...+...+.+. ..+++||++|+++++++++++.
T Consensus 2 ~~~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~-~~~~~~Dv~d~~~v~~~~~~~~ 80 (271)
T PRK06505 2 EGLMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGS-DFVLPCDVEDIASVDAVFEALE 80 (271)
T ss_pred ccccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCC-ceEEeCCCCCHHHHHHHHHHHH
Confidence 3458899999999997 999999999999999999999875433333222222333 3578999999999999999999
Q ss_pred HHhCCccEEEECCCCCCC----CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc
Q 022386 85 NHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 160 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~ 160 (298)
+++|++|++|||||+... .++.+.+.++|++.+++|+.++++++++++|+|.+ +|+||+++|..+.
T Consensus 81 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~----------~G~Iv~isS~~~~ 150 (271)
T PRK06505 81 KKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD----------GGSMLTLTYGGST 150 (271)
T ss_pred HHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc----------CceEEEEcCCCcc
Confidence 999999999999997542 45678899999999999999999999999999963 4789999999988
Q ss_pred cCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHH
Q 022386 161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240 (298)
Q Consensus 161 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 240 (298)
.+.+.+..|++||+|+.+|+++++.|++ ++|||||+|+||+++|++.......+..........|.+++.+|+|+++.+
T Consensus 151 ~~~~~~~~Y~asKaAl~~l~r~la~el~-~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peeva~~~ 229 (271)
T PRK06505 151 RVMPNYNVMGVAKAALEASVRYLAADYG-PQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPLRRTVTIDEVGGSA 229 (271)
T ss_pred ccCCccchhhhhHHHHHHHHHHHHHHHh-hcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCccccCCHHHHHHHH
Confidence 8888889999999999999999999998 889999999999999976432211222233344556888999999999999
Q ss_pred HHhcCCCCCCccccEEEeCCCCCCC
Q 022386 241 LYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 241 ~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
+||+++.+.++||+.|.+|||..+.
T Consensus 230 ~fL~s~~~~~itG~~i~vdgG~~~~ 254 (271)
T PRK06505 230 LYLLSDLSSGVTGEIHFVDSGYNIV 254 (271)
T ss_pred HHHhCccccccCceEEeecCCcccC
Confidence 9999999999999999999997653
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-45 Score=317.83 Aligned_cols=250 Identities=24% Similarity=0.248 Sum_probs=211.3
Q ss_pred CCCCCCCCcEEEEecCCc--hhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES 82 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~--giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~ 82 (298)
|....|+||+++||||++ |||+++|+.|+++|++|++++|+. ..++..+++.+..+...+++||++|+++++++++.
T Consensus 1 ~~~~~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~ 79 (260)
T PRK06603 1 MTTGLLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDD 79 (260)
T ss_pred CCCcccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHH
Confidence 455678899999999997 999999999999999999998873 34444555544322234678999999999999999
Q ss_pred HHHHhCCccEEEECCCCCC----CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccc
Q 022386 83 TINHFGKLDILVNAAAGNF----LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (298)
Q Consensus 83 ~~~~~~~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~ 158 (298)
+.++|+++|++|||||... ..++.+.+.++|++.+++|+.+++++++.+.|+|.+ +|+||+++|..
T Consensus 80 ~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~----------~G~Iv~isS~~ 149 (260)
T PRK06603 80 IKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD----------GGSIVTLTYYG 149 (260)
T ss_pred HHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc----------CceEEEEecCc
Confidence 9999999999999999753 246778899999999999999999999999999953 48899999998
Q ss_pred cccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHH
Q 022386 159 HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 238 (298)
Q Consensus 159 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 238 (298)
+..+.+.+..|++||+|+.+|+++++.|++ ++|||||+|+||+++|++.......++..+......|.+++.+|+|+++
T Consensus 150 ~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~ 228 (260)
T PRK06603 150 AEKVIPNYNVMGVAKAALEASVKYLANDMG-ENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQEDVGG 228 (260)
T ss_pred cccCCCcccchhhHHHHHHHHHHHHHHHhh-hcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCcCCCCCHHHHHH
Confidence 888888889999999999999999999998 8899999999999998753221111233344555678899999999999
Q ss_pred HHHHhcCCCCCCccccEEEeCCCCCCCC
Q 022386 239 AALYLASDAGKYVNGNTLIVDGGNWLSN 266 (298)
Q Consensus 239 ~~~~L~s~~~~~~~G~~i~~dgG~~~~~ 266 (298)
++.||+++.+.++||+.+.+|||..+..
T Consensus 229 ~~~~L~s~~~~~itG~~i~vdgG~~~~~ 256 (260)
T PRK06603 229 AAVYLFSELSKGVTGEIHYVDCGYNIMG 256 (260)
T ss_pred HHHHHhCcccccCcceEEEeCCcccccC
Confidence 9999999999999999999999987743
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-45 Score=320.80 Aligned_cols=243 Identities=27% Similarity=0.292 Sum_probs=205.2
Q ss_pred CCCCcEEEEecCC--chhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHH-HhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 9 ILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-HSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 9 ~l~gk~~lVtG~t--~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~-~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
.|+||+++||||+ +|||+++|++|+++|++|++++|+.. .++..+.+ .+.+.. .+++||++|+++++++++++.+
T Consensus 2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~ 79 (274)
T PRK08415 2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKK 79 (274)
T ss_pred ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHH
Confidence 5689999999997 89999999999999999999999853 22233333 223334 6789999999999999999999
Q ss_pred HhCCccEEEECCCCCC----CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc
Q 022386 86 HFGKLDILVNAAAGNF----LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 161 (298)
Q Consensus 86 ~~~~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~ 161 (298)
.++++|++|||||+.. ..++.+.+.++|+++|++|+.++++++++++|+|.+ +|+||++||..+..
T Consensus 80 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~----------~g~Iv~isS~~~~~ 149 (274)
T PRK08415 80 DLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND----------GASVLTLSYLGGVK 149 (274)
T ss_pred HcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc----------CCcEEEEecCCCcc
Confidence 9999999999999754 256778899999999999999999999999999964 47899999999888
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCCh-HHHHHHHhhhccCCCCCCHHHHHHHH
Q 022386 162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDIAMAA 240 (298)
Q Consensus 162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~ 240 (298)
+.+.+..|++||+|+.+|+++++.|++ ++|||||+|+||+++|++... ..+ +..........|++++.+|+|+++++
T Consensus 150 ~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~pl~r~~~pedva~~v 227 (274)
T PRK08415 150 YVPHYNVMGVAKAALESSVRYLAVDLG-KKGIRVNAISAGPIKTLAASG-IGDFRMILKWNEINAPLKKNVSIEEVGNSG 227 (274)
T ss_pred CCCcchhhhhHHHHHHHHHHHHHHHhh-hcCeEEEEEecCccccHHHhc-cchhhHHhhhhhhhCchhccCCHHHHHHHH
Confidence 888889999999999999999999998 889999999999999875322 111 11112223356888999999999999
Q ss_pred HHhcCCCCCCccccEEEeCCCCCCC
Q 022386 241 LYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 241 ~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
.||+++.+.++||+.+.+|||..+.
T Consensus 228 ~fL~s~~~~~itG~~i~vdGG~~~~ 252 (274)
T PRK08415 228 MYLLSDLSSGVTGEIHYVDAGYNIM 252 (274)
T ss_pred HHHhhhhhhcccccEEEEcCccccc
Confidence 9999998999999999999998763
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-45 Score=315.02 Aligned_cols=249 Identities=29% Similarity=0.450 Sum_probs=221.3
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHh--CCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS--LGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
.+|++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.. .+.++.+++||++++++++++++++.+
T Consensus 3 ~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 82 (260)
T PRK07063 3 NRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEE 82 (260)
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 568899999999999999999999999999999999998888888888876 456788999999999999999999999
Q ss_pred HhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC
Q 022386 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~ 165 (298)
.++++|++|||||.....+..+.+.++|++++++|+.++++++++++|+|.+++ .|+||++||..+..+.+.
T Consensus 83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~ 154 (260)
T PRK07063 83 AFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERG--------RGSIVNIASTHAFKIIPG 154 (260)
T ss_pred HhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhC--------CeEEEEECChhhccCCCC
Confidence 999999999999987666667788999999999999999999999999998765 589999999999888888
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC---C-hHHHHHHHhhhccCCCCCCHHHHHHHHH
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---A-PEEIRSKATDYMAAYKFGEKWDIAMAAL 241 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~dva~~~~ 241 (298)
...|++||+|+..++++++.|++ ++|||||+|+||+++|++..... . ++..........|.+++.+|+|+++.++
T Consensus 155 ~~~Y~~sKaa~~~~~~~la~el~-~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~va~~~~ 233 (260)
T PRK07063 155 CFPYPVAKHGLLGLTRALGIEYA-ARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAV 233 (260)
T ss_pred chHHHHHHHHHHHHHHHHHHHhC-ccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 99999999999999999999998 78999999999999998643221 1 1223334455678899999999999999
Q ss_pred HhcCCCCCCccccEEEeCCCCCCC
Q 022386 242 YLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 242 ~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
||+++.+.++||+++.+|||..+.
T Consensus 234 fl~s~~~~~itG~~i~vdgg~~~~ 257 (260)
T PRK07063 234 FLASDEAPFINATCITIDGGRSVL 257 (260)
T ss_pred HHcCccccccCCcEEEECCCeeee
Confidence 999999999999999999997653
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-45 Score=315.91 Aligned_cols=247 Identities=27% Similarity=0.306 Sum_probs=211.6
Q ss_pred CCCCCcEEEEecCC--chhHHHHHHHHHHcCCcEEEEcCChh--HHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKT--VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 8 ~~l~gk~~lVtG~t--~giG~~ia~~l~~~G~~Vv~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
.+|+||+++||||+ +|||+++|++|+++|++|+++.++.+ +.++..+++.+.+.++.+++||++|+++++++++.+
T Consensus 2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~ 81 (258)
T PRK07370 2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETI 81 (258)
T ss_pred cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHH
Confidence 45789999999986 89999999999999999998876543 344555666555556778899999999999999999
Q ss_pred HHHhCCccEEEECCCCCC----CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 84 INHFGKLDILVNAAAGNF----LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
.+.++++|++|||||+.. ..++.+.+.++|++.|++|+.++++++++++|.|++ +|+||++||..+
T Consensus 82 ~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~----------~g~Iv~isS~~~ 151 (258)
T PRK07370 82 KQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE----------GGSIVTLTYLGG 151 (258)
T ss_pred HHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh----------CCeEEEEecccc
Confidence 999999999999999753 256778899999999999999999999999999974 478999999999
Q ss_pred ccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHH
Q 022386 160 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239 (298)
Q Consensus 160 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (298)
..+.+....|++||+|+.+|+++++.|++ ++||+||+|+||+++|++.......++..+......|.+++.+|+|+++.
T Consensus 152 ~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~ 230 (258)
T PRK07370 152 VRAIPNYNVMGVAKAALEASVRYLAAELG-PKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPLRRTVTQTEVGNT 230 (258)
T ss_pred ccCCcccchhhHHHHHHHHHHHHHHHHhC-cCCeEEEEEecCcccCchhhccccchhhhhhhhhcCCcCcCCCHHHHHHH
Confidence 88888899999999999999999999998 88999999999999998543221112333444456788899999999999
Q ss_pred HHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 240 ALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 240 ~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
+.||+++.+.++||+.+.+|||..+.
T Consensus 231 ~~fl~s~~~~~~tG~~i~vdgg~~~~ 256 (258)
T PRK07370 231 AAFLLSDLASGITGQTIYVDAGYCIM 256 (258)
T ss_pred HHHHhChhhccccCcEEEECCccccc
Confidence 99999999999999999999997654
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-45 Score=315.82 Aligned_cols=246 Identities=22% Similarity=0.215 Sum_probs=208.6
Q ss_pred CCCCCcEEEEecC--CchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGG--GSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 8 ~~l~gk~~lVtG~--t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
..|+||+++|||| ++|||+++|+.|+++|++|++++|+. +.++..+++....+....++||++|+++++++++++.+
T Consensus 2 ~~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (261)
T PRK08690 2 GFLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGK 80 (261)
T ss_pred CccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHH
Confidence 3488999999997 67999999999999999999988763 34444555544434456789999999999999999999
Q ss_pred HhCCccEEEECCCCCCCC----C-CCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc
Q 022386 86 HFGKLDILVNAAAGNFLV----P-AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 160 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~~----~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~ 160 (298)
+++++|++|||||+.... + +++.+.++|+.++++|+.++++++++++|.|+++ +|+||++||..+.
T Consensus 81 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~---------~g~Iv~iss~~~~ 151 (261)
T PRK08690 81 HWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR---------NSAIVALSYLGAV 151 (261)
T ss_pred HhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc---------CcEEEEEcccccc
Confidence 999999999999976432 2 3456788999999999999999999999999753 4789999999998
Q ss_pred cCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHH
Q 022386 161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240 (298)
Q Consensus 161 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 240 (298)
.+.+.+..|++||+|+..|+++++.|++ ++|||||+|+||+++|++.......++.........|.+++.+|+|+|+++
T Consensus 152 ~~~~~~~~Y~asKaal~~l~~~la~e~~-~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v 230 (261)
T PRK08690 152 RAIPNYNVMGMAKASLEAGIRFTAACLG-KEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVTIEEVGNTA 230 (261)
T ss_pred cCCCCcccchhHHHHHHHHHHHHHHHhh-hcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCCCCCCCHHHHHHHH
Confidence 8888899999999999999999999998 889999999999999985432222233334455667899999999999999
Q ss_pred HHhcCCCCCCccccEEEeCCCCCC
Q 022386 241 LYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 241 ~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
.||+++.+.++||+.|.+|||..+
T Consensus 231 ~~l~s~~~~~~tG~~i~vdgG~~~ 254 (261)
T PRK08690 231 AFLLSDLSSGITGEITYVDGGYSI 254 (261)
T ss_pred HHHhCcccCCcceeEEEEcCCccc
Confidence 999999999999999999999765
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-45 Score=312.84 Aligned_cols=248 Identities=28% Similarity=0.383 Sum_probs=218.5
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
.+.+++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++++++++++++++.+
T Consensus 3 ~~~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (253)
T PRK05867 3 DLFDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTA 82 (253)
T ss_pred ccccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 44578999999999999999999999999999999999999888888888887777888999999999999999999999
Q ss_pred HhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC-C
Q 022386 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-W 164 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~-~ 164 (298)
.++++|++|||||.....++.+.+.++|++.+++|+.+++++++++.|+|.+++. +|+||++||..+.... +
T Consensus 83 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-------~g~iv~~sS~~~~~~~~~ 155 (253)
T PRK05867 83 ELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQ-------GGVIINTASMSGHIINVP 155 (253)
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCC-------CcEEEEECcHHhcCCCCC
Confidence 9999999999999877777888899999999999999999999999999987531 4789999998776433 3
Q ss_pred -CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHh
Q 022386 165 -YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (298)
Q Consensus 165 -~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L 243 (298)
....|++||+|++.++++++.|++ ++||+||+|+||+++|++.... .+.........+.+++.+|+|+|+++.||
T Consensus 156 ~~~~~Y~asKaal~~~~~~la~e~~-~~gI~vn~i~PG~v~t~~~~~~---~~~~~~~~~~~~~~r~~~p~~va~~~~~L 231 (253)
T PRK05867 156 QQVSHYCASKAAVIHLTKAMAVELA-PHKIRVNSVSPGYILTELVEPY---TEYQPLWEPKIPLGRLGRPEELAGLYLYL 231 (253)
T ss_pred CCccchHHHHHHHHHHHHHHHHHHh-HhCeEEEEeecCCCCCcccccc---hHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 457899999999999999999998 7899999999999999865322 12233444567889999999999999999
Q ss_pred cCCCCCCccccEEEeCCCCCC
Q 022386 244 ASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 244 ~s~~~~~~~G~~i~~dgG~~~ 264 (298)
+++.++++||+.|.+|||...
T Consensus 232 ~s~~~~~~tG~~i~vdgG~~~ 252 (253)
T PRK05867 232 ASEASSYMTGSDIVIDGGYTC 252 (253)
T ss_pred cCcccCCcCCCeEEECCCccC
Confidence 999999999999999999653
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-45 Score=312.15 Aligned_cols=253 Identities=38% Similarity=0.521 Sum_probs=219.1
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCC---CCeEEEEccCCCHHHHHHHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVES 82 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dls~~~~~~~~~~~ 82 (298)
.+..|.||+++|||+++|||+++|++|++.|++|++++|+.+.+++....+...+ .++..+.||++++++++++++.
T Consensus 2 ~~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~ 81 (270)
T KOG0725|consen 2 SGGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEF 81 (270)
T ss_pred CCccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHH
Confidence 4578999999999999999999999999999999999999999999888877654 4589999999999999999999
Q ss_pred HHHH-hCCccEEEECCCCCCCC-CCCCCCHHHHHHHHHhhhHH-HHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 83 TINH-FGKLDILVNAAAGNFLV-PAEDLSPNGFRTVIEIDSVG-TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 83 ~~~~-~~~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~n~~~-~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
..+. ||++|++|||||..... +..+.+.++|+.++++|++| .+.+.+.+.+++++++ +|.|+++||..+
T Consensus 82 ~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~--------gg~I~~~ss~~~ 153 (270)
T KOG0725|consen 82 AVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSK--------GGSIVNISSVAG 153 (270)
T ss_pred HHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcC--------CceEEEEecccc
Confidence 9999 79999999999987654 78899999999999999995 6666777777777755 789999999998
Q ss_pred ccCCCCc-hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCCh---HHHHHH--HhhhccCCCCCCH
Q 022386 160 YTATWYQ-IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP---EEIRSK--ATDYMAAYKFGEK 233 (298)
Q Consensus 160 ~~~~~~~-~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~ 233 (298)
..+.+.. ..|+++|+|+++|+|+++.||. ++|||||+|+||.+.|+........ +++.+. .....|.+++..|
T Consensus 154 ~~~~~~~~~~Y~~sK~al~~ltr~lA~El~-~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~ 232 (270)
T KOG0725|consen 154 VGPGPGSGVAYGVSKAALLQLTRSLAKELA-KHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRVGTP 232 (270)
T ss_pred ccCCCCCcccchhHHHHHHHHHHHHHHHHh-hcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccccCCccCH
Confidence 8776555 7999999999999999999998 8999999999999999862222221 233333 3445689999999
Q ss_pred HHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCC
Q 022386 234 WDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNP 267 (298)
Q Consensus 234 ~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~ 267 (298)
+|+++.+.||++++++|++|+.|.+|||.++..+
T Consensus 233 ~eva~~~~fla~~~asyitG~~i~vdgG~~~~~~ 266 (270)
T KOG0725|consen 233 EEVAEAAAFLASDDASYITGQTIIVDGGFTVVGP 266 (270)
T ss_pred HHHHHhHHhhcCcccccccCCEEEEeCCEEeecc
Confidence 9999999999999877999999999999998543
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-44 Score=310.14 Aligned_cols=250 Identities=31% Similarity=0.432 Sum_probs=221.2
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
|+++++|+++||||++|||++++++|+++|++|++++|+.++++++.+++.+.+.++.++.||++++++++++++++.++
T Consensus 1 ~~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (254)
T PRK07478 1 MMRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVER 80 (254)
T ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 34678999999999999999999999999999999999998888888888877778999999999999999999999999
Q ss_pred hCCccEEEECCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc-cCCC
Q 022386 87 FGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATW 164 (298)
Q Consensus 87 ~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~-~~~~ 164 (298)
++++|++|||||... ..++.+.+.++|++.+++|+.+++++++.++|.|++++ .++||++||..+. .+.+
T Consensus 81 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~--------~~~iv~~sS~~~~~~~~~ 152 (254)
T PRK07478 81 FGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARG--------GGSLIFTSTFVGHTAGFP 152 (254)
T ss_pred cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--------CceEEEEechHhhccCCC
Confidence 999999999999753 46677888999999999999999999999999998765 6889999998876 4677
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhc
Q 022386 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (298)
Q Consensus 165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~ 244 (298)
....|++||++++.++++++.|++ ++||+||+|+||+++|++.......++.........+.+++.+|+|+++.++||+
T Consensus 153 ~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~ 231 (254)
T PRK07478 153 GMAAYAASKAGLIGLTQVLAAEYG-AQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAALFLA 231 (254)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHh-hcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence 889999999999999999999997 7899999999999999865433223343444455567888999999999999999
Q ss_pred CCCCCCccccEEEeCCCCCCC
Q 022386 245 SDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 245 s~~~~~~~G~~i~~dgG~~~~ 265 (298)
++.+.+++|+.|.+|||..+.
T Consensus 232 s~~~~~~~G~~~~~dgg~~~~ 252 (254)
T PRK07478 232 SDAASFVTGTALLVDGGVSIT 252 (254)
T ss_pred CchhcCCCCCeEEeCCchhcc
Confidence 998899999999999997653
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-45 Score=297.10 Aligned_cols=231 Identities=27% Similarity=0.298 Sum_probs=204.9
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
|..+++|+++|||||+|||.++|+.|++.|++|++++|+.+++++++.++.+ .++..+..|++|.++++.+++.+.++
T Consensus 1 m~~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~--~~~~~~~~DVtD~~~~~~~i~~~~~~ 78 (246)
T COG4221 1 MTTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA--GAALALALDVTDRAAVEAAIEALPEE 78 (246)
T ss_pred CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc--CceEEEeeccCCHHHHHHHHHHHHHh
Confidence 3567789999999999999999999999999999999999999999999876 67889999999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
|+++|+||||||.....++.+.+.++|+.++++|+.|.++.+++++|.|.+++ .|.|||+||+++..+++..
T Consensus 79 ~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~--------~G~IiN~~SiAG~~~y~~~ 150 (246)
T COG4221 79 FGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERK--------SGHIINLGSIAGRYPYPGG 150 (246)
T ss_pred hCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcC--------CceEEEeccccccccCCCC
Confidence 99999999999988779999999999999999999999999999999999987 7899999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
..|+++|+++..|+..++.|+. .++|||..|.||.+.|+.+.... .+...++...........+|+|+|+.+.|.++.
T Consensus 151 ~vY~ATK~aV~~fs~~LR~e~~-g~~IRVt~I~PG~v~~~~~s~v~-~~g~~~~~~~~y~~~~~l~p~dIA~~V~~~~~~ 228 (246)
T COG4221 151 AVYGATKAAVRAFSLGLRQELA-GTGIRVTVISPGLVETTEFSTVR-FEGDDERADKVYKGGTALTPEDIAEAVLFAATQ 228 (246)
T ss_pred ccchhhHHHHHHHHHHHHHHhc-CCCeeEEEecCceecceeccccc-CCchhhhHHHHhccCCCCCHHHHHHHHHHHHhC
Confidence 9999999999999999999997 88999999999999766433322 222222222322345578999999999999987
Q ss_pred CCC
Q 022386 247 AGK 249 (298)
Q Consensus 247 ~~~ 249 (298)
+..
T Consensus 229 P~~ 231 (246)
T COG4221 229 PQH 231 (246)
T ss_pred CCc
Confidence 644
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-45 Score=312.37 Aligned_cols=246 Identities=26% Similarity=0.283 Sum_probs=208.0
Q ss_pred CCCCCCcEEEEecCC--chhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t--~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
..+|+||+++||||+ +|||+++|++|+++|++|++++|+.+..+ ..+++.+....+.+++||++|+++++++++.+.
T Consensus 5 ~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 83 (258)
T PRK07533 5 LLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARP-YVEPLAEELDAPIFLPLDVREPGQLEAVFARIA 83 (258)
T ss_pred ccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHH-HHHHHHHhhccceEEecCcCCHHHHHHHHHHHH
Confidence 345789999999999 59999999999999999999999854322 222332222235678999999999999999999
Q ss_pred HHhCCccEEEECCCCCCC----CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc
Q 022386 85 NHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 160 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~ 160 (298)
++|+++|++|||||.... +++.+.+.++|+++|++|+.+++++++.++|+|++ +|+||++||..+.
T Consensus 84 ~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~----------~g~Ii~iss~~~~ 153 (258)
T PRK07533 84 EEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN----------GGSLLTMSYYGAE 153 (258)
T ss_pred HHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc----------CCEEEEEeccccc
Confidence 999999999999997542 56778899999999999999999999999999953 4789999999888
Q ss_pred cCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHH
Q 022386 161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240 (298)
Q Consensus 161 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 240 (298)
.+.+.+..|++||+|+.+|+++++.|++ ++||+||+|+||+++|++.......++..+......|.+++.+|+|+++.+
T Consensus 154 ~~~~~~~~Y~asKaal~~l~~~la~el~-~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~ 232 (258)
T PRK07533 154 KVVENYNLMGPVKAALESSVRYLAAELG-PKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPLRRLVDIDDVGAVA 232 (258)
T ss_pred cCCccchhhHHHHHHHHHHHHHHHHHhh-hcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCcCCCCCHHHHHHHH
Confidence 8888889999999999999999999998 889999999999999986533222233334455567888999999999999
Q ss_pred HHhcCCCCCCccccEEEeCCCCCC
Q 022386 241 LYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 241 ~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
+||+++.+.+++|+.+.+|||..+
T Consensus 233 ~~L~s~~~~~itG~~i~vdgg~~~ 256 (258)
T PRK07533 233 AFLASDAARRLTGNTLYIDGGYHI 256 (258)
T ss_pred HHHhChhhccccCcEEeeCCcccc
Confidence 999999889999999999999764
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-44 Score=312.20 Aligned_cols=244 Identities=22% Similarity=0.241 Sum_probs=207.2
Q ss_pred CCCCcEEEEecCCc--hhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 9 ILKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 9 ~l~gk~~lVtG~t~--giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.|+||+++||||++ |||+++|+.|+++|++|++++|+ +++++..+++....+.+.++.||++|+++++++++++.+.
T Consensus 3 ~l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 81 (262)
T PRK07984 3 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKV 81 (262)
T ss_pred ccCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhh
Confidence 37899999999986 99999999999999999999987 3455555666555455778899999999999999999999
Q ss_pred hCCccEEEECCCCCCCCC-----CCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc
Q 022386 87 FGKLDILVNAAAGNFLVP-----AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 161 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~ 161 (298)
|+++|++|||||+....+ +.+.+.++|+..+++|+.+++++++.+.|.+.+ +|+||++||..+..
T Consensus 82 ~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~----------~g~Iv~iss~~~~~ 151 (262)
T PRK07984 82 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP----------GSALLTLSYLGAER 151 (262)
T ss_pred cCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcC----------CcEEEEEecCCCCC
Confidence 999999999999754322 456788999999999999999999999986642 47899999998888
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHH
Q 022386 162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241 (298)
Q Consensus 162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~ 241 (298)
+.+.+..|++||+|+.+|+++++.|++ ++|||||+|+||+++|++.......++..+......|.+++.+|+|+++.+.
T Consensus 152 ~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~ 230 (262)
T PRK07984 152 AIPNYNVMGLAKASLEANVRYMANAMG-PEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAA 230 (262)
T ss_pred CCCCcchhHHHHHHHHHHHHHHHHHhc-ccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCCcCCCCHHHHHHHHH
Confidence 888889999999999999999999998 8899999999999998753221111233334445678899999999999999
Q ss_pred HhcCCCCCCccccEEEeCCCCCC
Q 022386 242 YLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 242 ~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
||+++.+.+++|+.+.+|||..+
T Consensus 231 ~L~s~~~~~itG~~i~vdgg~~~ 253 (262)
T PRK07984 231 FLCSDLSAGISGEVVHVDGGFSI 253 (262)
T ss_pred HHcCcccccccCcEEEECCCccc
Confidence 99999899999999999999765
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-44 Score=310.97 Aligned_cols=245 Identities=22% Similarity=0.247 Sum_probs=207.7
Q ss_pred CCCCCCcEEEEecCC--chhHHHHHHHHHHcCCcEEEEcCCh---hHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRK---TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVE 81 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t--~giG~~ia~~l~~~G~~Vv~~~r~~---~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~ 81 (298)
+.+++||+++||||+ +|||+++|+.|+++|++|++++|+. +.++++.+++. +.++.+++||++|+++++++++
T Consensus 2 ~~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~ 79 (257)
T PRK08594 2 MLSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE--GQESLLLPCDVTSDEEITACFE 79 (257)
T ss_pred ccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC--CCceEEEecCCCCHHHHHHHHH
Confidence 356889999999997 8999999999999999999998753 23333333332 4568889999999999999999
Q ss_pred HHHHHhCCccEEEECCCCCC----CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccc
Q 022386 82 STINHFGKLDILVNAAAGNF----LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 157 (298)
Q Consensus 82 ~~~~~~~~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~ 157 (298)
++.+.+|++|++|||||+.. ..++.+.+.++|...+++|+.++++++++++|+|.+ +|+||++||.
T Consensus 80 ~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~----------~g~Iv~isS~ 149 (257)
T PRK08594 80 TIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE----------GGSIVTLTYL 149 (257)
T ss_pred HHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc----------CceEEEEccc
Confidence 99999999999999999753 256677889999999999999999999999999954 4889999999
Q ss_pred ccccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHH
Q 022386 158 LHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA 237 (298)
Q Consensus 158 ~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva 237 (298)
.+..+.+....|++||+|+.+|+++++.|++ ++|||||+|+||+++|++.......++..+......|.+++.+|+|++
T Consensus 150 ~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va 228 (257)
T PRK08594 150 GGERVVQNYNVMGVAKASLEASVKYLANDLG-KDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPLRRTTTQEEVG 228 (257)
T ss_pred CCccCCCCCchhHHHHHHHHHHHHHHHHHhh-hcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCCccccCCHHHHH
Confidence 9988888889999999999999999999998 789999999999999875322111122223344556888999999999
Q ss_pred HHHHHhcCCCCCCccccEEEeCCCCCC
Q 022386 238 MAALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 238 ~~~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
+.+.||+++.++++||+.+.+|||..+
T Consensus 229 ~~~~~l~s~~~~~~tG~~~~~dgg~~~ 255 (257)
T PRK08594 229 DTAAFLFSDLSRGVTGENIHVDSGYHI 255 (257)
T ss_pred HHHHHHcCcccccccceEEEECCchhc
Confidence 999999999999999999999999654
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-44 Score=307.51 Aligned_cols=249 Identities=31% Similarity=0.450 Sum_probs=218.6
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh-HHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
.+.+|++|+++||||++|||+++|++|+++|++|++++|+.+ .+++..+.+.+.+.++.++.+|++|+++++++++++.
T Consensus 2 ~~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~ 81 (254)
T PRK06114 2 QLFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTE 81 (254)
T ss_pred CccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999999754 4567777777767788899999999999999999999
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~ 164 (298)
+.++++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++ .++||++||..+..+.+
T Consensus 82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~ 153 (254)
T PRK06114 82 AELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENG--------GGSIVNIASMSGIIVNR 153 (254)
T ss_pred HHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC--------CcEEEEECchhhcCCCC
Confidence 9999999999999987667778889999999999999999999999999998765 68999999998876654
Q ss_pred C--chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHH
Q 022386 165 Y--QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (298)
Q Consensus 165 ~--~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 242 (298)
. ...|+++|+|++.++++++.|+. ++|||||+|+||+++|++...... .+..+.+....|.+++.+|+|+++.++|
T Consensus 154 ~~~~~~Y~~sKaa~~~l~~~la~e~~-~~gi~v~~v~PG~i~t~~~~~~~~-~~~~~~~~~~~p~~r~~~~~dva~~~~~ 231 (254)
T PRK06114 154 GLLQAHYNASKAGVIHLSKSLAMEWV-GRGIRVNSISPGYTATPMNTRPEM-VHQTKLFEEQTPMQRMAKVDEMVGPAVF 231 (254)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEeecCccCcccccccc-hHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 3 68999999999999999999998 889999999999999986543211 2223445566789999999999999999
Q ss_pred hcCCCCCCccccEEEeCCCCCC
Q 022386 243 LASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 243 L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
|+++.++++||++|.+|||..+
T Consensus 232 l~s~~~~~~tG~~i~~dgg~~~ 253 (254)
T PRK06114 232 LLSDAASFCTGVDLLVDGGFVC 253 (254)
T ss_pred HcCccccCcCCceEEECcCEec
Confidence 9999999999999999999753
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-44 Score=309.65 Aligned_cols=246 Identities=23% Similarity=0.204 Sum_probs=202.5
Q ss_pred CCCCCcEEEEecC--CchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGG--GSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 8 ~~l~gk~~lVtG~--t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
..|++|+++|||| ++|||+++|++|+++|++|++++|..... +..+++.+..+...+++||++|+++++++++.+.+
T Consensus 2 ~~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 80 (260)
T PRK06997 2 GFLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFK-DRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQ 80 (260)
T ss_pred CccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHH-HHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHH
Confidence 3478999999996 68999999999999999999987653222 22223322212335688999999999999999999
Q ss_pred HhCCccEEEECCCCCCCC----C-CCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc
Q 022386 86 HFGKLDILVNAAAGNFLV----P-AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 160 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~~----~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~ 160 (298)
.|+++|++|||||+.... + +.+.+.++|++.|++|+.++++++++++|+|.+ .|+||++||..+.
T Consensus 81 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~----------~g~Ii~iss~~~~ 150 (260)
T PRK06997 81 HWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD----------DASLLTLSYLGAE 150 (260)
T ss_pred HhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC----------CceEEEEeccccc
Confidence 999999999999975432 2 345788999999999999999999999999942 4789999999998
Q ss_pred cCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHH
Q 022386 161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240 (298)
Q Consensus 161 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 240 (298)
.+.+...+|++||+|+.+|+++++.|++ ++|||||+|+||+++|++.......++..+......|.+++.+|+|+++.+
T Consensus 151 ~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~ 229 (260)
T PRK06997 151 RVVPNYNTMGLAKASLEASVRYLAVSLG-PKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPLRRNVTIEEVGNVA 229 (260)
T ss_pred cCCCCcchHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeeCccccchhccccchhhHHHHHHhcCcccccCCHHHHHHHH
Confidence 8888889999999999999999999998 889999999999999875332211123333344556888999999999999
Q ss_pred HHhcCCCCCCccccEEEeCCCCCCC
Q 022386 241 LYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 241 ~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
.||+++.+.++||+.|.+|||.+..
T Consensus 230 ~~l~s~~~~~itG~~i~vdgg~~~~ 254 (260)
T PRK06997 230 AFLLSDLASGVTGEITHVDSGFNAV 254 (260)
T ss_pred HHHhCccccCcceeEEEEcCChhhc
Confidence 9999999999999999999997753
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-44 Score=306.37 Aligned_cols=248 Identities=29% Similarity=0.410 Sum_probs=224.0
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
++|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++++++++++++.+.+.+
T Consensus 5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (254)
T PRK08085 5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDI 84 (254)
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 46889999999999999999999999999999999999888888888887777778889999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
+++|++|||+|.....++.+.+.++|++.+++|+.+++++++++.+.|.+++ .++||++||..+..+.+...
T Consensus 85 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~ 156 (254)
T PRK08085 85 GPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQ--------AGKIINICSMQSELGRDTIT 156 (254)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--------CcEEEEEccchhccCCCCCc
Confidence 9999999999987767788889999999999999999999999999998754 58899999998888888889
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~ 247 (298)
.|+++|++++.++++++.|++ ++||++|+|+||+++|++.......++..+......|.+++.+|+|+++.+.||+++.
T Consensus 157 ~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~ 235 (254)
T PRK08085 157 PYAASKGAVKMLTRGMCVELA-RHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKA 235 (254)
T ss_pred chHHHHHHHHHHHHHHHHHHH-hhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence 999999999999999999998 7899999999999999865543333444455566778899999999999999999999
Q ss_pred CCCccccEEEeCCCCCC
Q 022386 248 GKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 248 ~~~~~G~~i~~dgG~~~ 264 (298)
++++||+++.+|||...
T Consensus 236 ~~~i~G~~i~~dgg~~~ 252 (254)
T PRK08085 236 SDFVNGHLLFVDGGMLV 252 (254)
T ss_pred ccCCcCCEEEECCCeee
Confidence 99999999999999754
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-43 Score=307.94 Aligned_cols=247 Identities=28% Similarity=0.418 Sum_probs=216.4
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
..|++|++|||||++|||+++++.|+++|++|++++|+ +.+++..+++.+.+.++.++.||++++++++++++++.+.+
T Consensus 2 ~~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (272)
T PRK08589 2 KRLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQF 80 (272)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 46889999999999999999999999999999999999 77888888887777789999999999999999999999999
Q ss_pred CCccEEEECCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 88 GKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 88 ~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
+++|++|||||... ..++.+.+.+.|++++++|+.+++++++.++|+|+++ +|+||++||..+..+.+..
T Consensus 81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~ 151 (272)
T PRK08589 81 GRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQ---------GGSIINTSSFSGQAADLYR 151 (272)
T ss_pred CCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---------CCEEEEeCchhhcCCCCCC
Confidence 99999999999764 3567788899999999999999999999999999865 4789999999998888888
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCCh-H-H----HHHHHhhhccCCCCCCHHHHHHHH
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-E-E----IRSKATDYMAAYKFGEKWDIAMAA 240 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~-~-~----~~~~~~~~~~~~~~~~~~dva~~~ 240 (298)
.+|++||+|++.|+++++.|++ ++||+||+|+||+++|++....... + . +........|.+++.+|+|+++.+
T Consensus 152 ~~Y~asKaal~~l~~~la~e~~-~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~ 230 (272)
T PRK08589 152 SGYNAAKGAVINFTKSIAIEYG-RDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLV 230 (272)
T ss_pred chHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHHHHHHHH
Confidence 9999999999999999999998 7899999999999999865432211 1 1 111122345788899999999999
Q ss_pred HHhcCCCCCCccccEEEeCCCCCCC
Q 022386 241 LYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 241 ~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
.||+++.+.+++|+.+.+|||....
T Consensus 231 ~~l~s~~~~~~~G~~i~vdgg~~~~ 255 (272)
T PRK08589 231 VFLASDDSSFITGETIRIDGGVMAY 255 (272)
T ss_pred HHHcCchhcCcCCCEEEECCCcccC
Confidence 9999998899999999999997653
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-44 Score=307.35 Aligned_cols=250 Identities=26% Similarity=0.333 Sum_probs=218.7
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC--CCCeEEEEccCCCHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVES 82 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~ 82 (298)
|.+.+|+||+++||||++|||+++++.|+++|++|++++|+.+++++..+++... +.++.++.+|++|++++++++++
T Consensus 1 m~~~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 80 (265)
T PRK07062 1 MMQIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAA 80 (265)
T ss_pred CCccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHH
Confidence 3456789999999999999999999999999999999999988888887777654 34688899999999999999999
Q ss_pred HHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC
Q 022386 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (298)
Q Consensus 83 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~ 162 (298)
+.+.++++|++|||||.....++.+.+.++|++.+++|+.+++++++.++|.|++++ .|+||++||..+..+
T Consensus 81 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~ 152 (265)
T PRK07062 81 VEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASA--------AASIVCVNSLLALQP 152 (265)
T ss_pred HHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC--------CcEEEEeccccccCC
Confidence 999999999999999987777888889999999999999999999999999998765 589999999999988
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC--------hHHHHHHH--hhhccCCCCCC
Q 022386 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--------PEEIRSKA--TDYMAAYKFGE 232 (298)
Q Consensus 163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~--------~~~~~~~~--~~~~~~~~~~~ 232 (298)
.+....|+++|+|+.+++++++.|++ ++||+||+|+||+++|++...... .++..+.. ....|.+++.+
T Consensus 153 ~~~~~~y~asKaal~~~~~~la~e~~-~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~ 231 (265)
T PRK07062 153 EPHMVATSAARAGLLNLVKSLATELA-PKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGR 231 (265)
T ss_pred CCCchHhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCC
Confidence 88889999999999999999999998 789999999999999986432111 11111111 24568889999
Q ss_pred HHHHHHHHHHhcCCCCCCccccEEEeCCCCC
Q 022386 233 KWDIAMAALYLASDAGKYVNGNTLIVDGGNW 263 (298)
Q Consensus 233 ~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~ 263 (298)
|+|+++.++||+++.+.++||+++.+|||..
T Consensus 232 p~~va~~~~~L~s~~~~~~tG~~i~vdgg~~ 262 (265)
T PRK07062 232 PDEAARALFFLASPLSSYTTGSHIDVSGGFA 262 (265)
T ss_pred HHHHHHHHHHHhCchhcccccceEEEcCceE
Confidence 9999999999999988999999999999954
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-43 Score=304.83 Aligned_cols=250 Identities=32% Similarity=0.455 Sum_probs=221.0
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
|...+|++|++|||||++|||++++++|+++|++|++++|+ ++.++..+.+.+.+.++.++.||+++.++++++++++.
T Consensus 8 ~~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~ 86 (258)
T PRK06935 8 MDFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEAL 86 (258)
T ss_pred cccccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 44457889999999999999999999999999999999998 55667777776667778999999999999999999999
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~ 164 (298)
+.++++|++|||+|.....++.+.+.++|++.+++|+.++++++++++|+|.+++ .|+||++||..+..+.+
T Consensus 87 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~ 158 (258)
T PRK06935 87 EEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQG--------SGKIINIASMLSFQGGK 158 (258)
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC--------CeEEEEECCHHhccCCC
Confidence 9999999999999987667777888999999999999999999999999998765 58899999999988888
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhc
Q 022386 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (298)
Q Consensus 165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~ 244 (298)
....|+++|+++++++++++.|++ ++||+||.|+||+++|+........+...+......+.+++.+|+|+++.+.||+
T Consensus 159 ~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~ 237 (258)
T PRK06935 159 FVPAYTASKHGVAGLTKAFANELA-AYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFLA 237 (258)
T ss_pred CchhhHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEeccccccchhhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence 889999999999999999999998 7899999999999998864432222333344555678899999999999999999
Q ss_pred CCCCCCccccEEEeCCCCCC
Q 022386 245 SDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 245 s~~~~~~~G~~i~~dgG~~~ 264 (298)
++.+.+++|++|.+|||..+
T Consensus 238 s~~~~~~~G~~i~~dgg~~~ 257 (258)
T PRK06935 238 SRASDYVNGHILAVDGGWLV 257 (258)
T ss_pred ChhhcCCCCCEEEECCCeec
Confidence 99999999999999999654
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-44 Score=309.09 Aligned_cols=244 Identities=25% Similarity=0.245 Sum_probs=203.7
Q ss_pred CCCCcEEEEecCC--chhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 9 ILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 9 ~l~gk~~lVtG~t--~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
-|+||+++||||+ +|||+++|+.|+++|++|++++|+.. ..+..+++.+.-+...+++||++|+++++++++++.++
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 85 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK 85 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh
Confidence 4578999999997 89999999999999999999988632 23333333332233567899999999999999999999
Q ss_pred hCCccEEEECCCCCC----CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC
Q 022386 87 FGKLDILVNAAAGNF----LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (298)
Q Consensus 87 ~~~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~ 162 (298)
++++|++|||||+.. ..++.+.+.++|++.|++|+.++++++++++|+|.+ +|+||+++|..+..+
T Consensus 86 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~----------~g~Iv~iss~~~~~~ 155 (272)
T PRK08159 86 WGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD----------GGSILTLTYYGAEKV 155 (272)
T ss_pred cCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC----------CceEEEEeccccccC
Confidence 999999999999754 256678899999999999999999999999999953 488999999988888
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHH
Q 022386 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (298)
Q Consensus 163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 242 (298)
.+.+..|++||+|+.+|+++++.|++ ++|||||+|+||+++|++.......+..........|.+++.+|+|+|++++|
T Consensus 156 ~p~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~~~~ 234 (272)
T PRK08159 156 MPHYNVMGVAKAALEASVKYLAVDLG-PKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIEEVGDSALY 234 (272)
T ss_pred CCcchhhhhHHHHHHHHHHHHHHHhc-ccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCcccccCCHHHHHHHHHH
Confidence 88899999999999999999999998 88999999999999987532211111112222335688899999999999999
Q ss_pred hcCCCCCCccccEEEeCCCCCC
Q 022386 243 LASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 243 L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
|+++.+.++||+.|.+|||+.+
T Consensus 235 L~s~~~~~itG~~i~vdgG~~~ 256 (272)
T PRK08159 235 LLSDLSRGVTGEVHHVDSGYHV 256 (272)
T ss_pred HhCccccCccceEEEECCCcee
Confidence 9999999999999999999765
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-43 Score=305.54 Aligned_cols=250 Identities=26% Similarity=0.376 Sum_probs=216.7
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcC-ChhHHHHHHHHHHhC-CCCeEEEEccCCCHHHHHHHHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
.+.+|+||+++||||++|||+++++.|+++|++|+++++ +.+.++...+++... +.++.+++||++|+++++++++++
T Consensus 2 ~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 81 (260)
T PRK08416 2 MSNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKI 81 (260)
T ss_pred cccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence 457789999999999999999999999999999998875 455666666666543 567899999999999999999999
Q ss_pred HHHhCCccEEEECCCCCC------CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccc
Q 022386 84 INHFGKLDILVNAAAGNF------LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 157 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~~------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~ 157 (298)
.+.++++|++|||||... ..++.+.+.++|++.+++|+.+++.+++.++|.|++.+ .|+||++||.
T Consensus 82 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--------~g~iv~isS~ 153 (260)
T PRK08416 82 DEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVG--------GGSIISLSST 153 (260)
T ss_pred HHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccC--------CEEEEEEecc
Confidence 999999999999998642 24566778899999999999999999999999998764 5899999999
Q ss_pred ccccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHH
Q 022386 158 LHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA 237 (298)
Q Consensus 158 ~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva 237 (298)
.+..+.+....|++||+|++.++++++.|++ ++|||||+|+||+++|++.......++..+......|.+++.+|+|++
T Consensus 154 ~~~~~~~~~~~Y~asK~a~~~~~~~la~el~-~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va 232 (260)
T PRK08416 154 GNLVYIENYAGHGTSKAAVETMVKYAATELG-EKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQPEDLA 232 (260)
T ss_pred ccccCCCCcccchhhHHHHHHHHHHHHHHhh-hhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCCCCCCCHHHHH
Confidence 8888888899999999999999999999998 789999999999999986543322244445555667888999999999
Q ss_pred HHHHHhcCCCCCCccccEEEeCCCCCC
Q 022386 238 MAALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 238 ~~~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
+.++||+++.+.+++|+.+.+|||...
T Consensus 233 ~~~~~l~~~~~~~~~G~~i~vdgg~~~ 259 (260)
T PRK08416 233 GACLFLCSEKASWLTGQTIVVDGGTTF 259 (260)
T ss_pred HHHHHHcChhhhcccCcEEEEcCCeec
Confidence 999999999889999999999999653
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-43 Score=302.38 Aligned_cols=250 Identities=30% Similarity=0.443 Sum_probs=217.0
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
|+..+|+||+++|||+++|||++++++|+++|++|++++++. .++..+.+.+.+.++.++++|++|.++++++++++.
T Consensus 3 ~~~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 80 (253)
T PRK08993 3 LDAFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVE--PTETIEQVTALGRRFLSLTADLRKIDGIPALLERAV 80 (253)
T ss_pred ccccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcc--hHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 445578999999999999999999999999999999887754 244555565556678899999999999999999999
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~ 164 (298)
+.++++|++|||||.....++.+.+.++|++.+++|+.+++.+++++.|.|.+++. +|+||++||..+..+.+
T Consensus 81 ~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~ 153 (253)
T PRK08993 81 AEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGN-------GGKIINIASMLSFQGGI 153 (253)
T ss_pred HHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCC-------CeEEEEECchhhccCCC
Confidence 99999999999999876677788899999999999999999999999999987531 48899999999988888
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhc
Q 022386 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (298)
Q Consensus 165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~ 244 (298)
....|++||+|++.++++++.|+. ++||+||.|.||+++|++.......+..........|.+++.+|+|+++.+.||+
T Consensus 154 ~~~~Y~~sKaa~~~~~~~la~e~~-~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~ 232 (253)
T PRK08993 154 RVPSYTASKSGVMGVTRLMANEWA-KHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLA 232 (253)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhh-hhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence 889999999999999999999997 7899999999999999865433222333334456678899999999999999999
Q ss_pred CCCCCCccccEEEeCCCCCC
Q 022386 245 SDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 245 s~~~~~~~G~~i~~dgG~~~ 264 (298)
++.+.+++|+.+.+|||...
T Consensus 233 s~~~~~~~G~~~~~dgg~~~ 252 (253)
T PRK08993 233 SSASDYINGYTIAVDGGWLA 252 (253)
T ss_pred CccccCccCcEEEECCCEec
Confidence 99999999999999999653
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-43 Score=309.65 Aligned_cols=246 Identities=27% Similarity=0.272 Sum_probs=207.5
Q ss_pred CCCCCcEEEEecC--CchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC----------CC---CeEEEEccC--
Q 022386 8 DILKGKVALLTGG--GSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL----------GI---PAIGLEGDV-- 70 (298)
Q Consensus 8 ~~l~gk~~lVtG~--t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~----------~~---~~~~~~~Dl-- 70 (298)
.+|+||++||||+ ++|||+++|+.|+++|++|++ +|+.++++++...+... +. ....+.+|+
T Consensus 5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 83 (303)
T PLN02730 5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF 83 (303)
T ss_pred cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence 4599999999999 899999999999999999998 78888888877666431 11 145678898
Q ss_pred CC------------------HHHHHHHHHHHHHHhCCccEEEECCCCCC--CCCCCCCCHHHHHHHHHhhhHHHHHHHHH
Q 022386 71 RK------------------REDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130 (298)
Q Consensus 71 s~------------------~~~~~~~~~~~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~ 130 (298)
++ +++++++++++.+.||++|+||||||... ..++.+.+.++|+++|++|+.++++++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~ 163 (303)
T PLN02730 84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQH 163 (303)
T ss_pred CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence 33 44899999999999999999999998543 37788899999999999999999999999
Q ss_pred HHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc-hhhHHHHHHHHHHHHHHHHHhcCC-CCeEEEEEeCCcccCCcc
Q 022386 131 ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ-IHVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTAG 208 (298)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~-~~Y~~sK~a~~~l~~~la~e~~~~-~girv~~i~PG~v~t~~~ 208 (298)
++|.|++ +|+||++||..+..+.+.. ..|++||+|+.+|+++++.|++ + +|||||+|+||+++|++.
T Consensus 164 ~~p~m~~----------~G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~-~~~gIrVn~V~PG~v~T~~~ 232 (303)
T PLN02730 164 FGPIMNP----------GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAG-RKYKIRVNTISAGPLGSRAA 232 (303)
T ss_pred HHHHHhc----------CCEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhC-cCCCeEEEEEeeCCccCchh
Confidence 9999975 4889999999988887755 5899999999999999999997 5 699999999999999876
Q ss_pred cCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 209 VSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
......++.........|..++.+|+|++..++||+++.+.+++|+.+.+|||....
T Consensus 233 ~~~~~~~~~~~~~~~~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~~~~ 289 (303)
T PLN02730 233 KAIGFIDDMIEYSYANAPLQKELTADEVGNAAAFLASPLASAITGATIYVDNGLNAM 289 (303)
T ss_pred hcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCcccc
Confidence 432112333333344457788999999999999999999999999999999998763
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-43 Score=302.31 Aligned_cols=252 Identities=29% Similarity=0.438 Sum_probs=226.7
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
|++.+|+||+++||||++|||++++++|+++|++|++++|+.+..++..+.+.+.+.++.++++|++|+++++++++.+.
T Consensus 3 ~~~~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 82 (255)
T PRK07523 3 LNLFDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFE 82 (255)
T ss_pred ccccCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHH
Confidence 55667899999999999999999999999999999999999888888888887767788999999999999999999999
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~ 164 (298)
+.++++|++|||+|.....++.+.+.++|++.+++|+.+++++++++.++|.++. .|+||++||..+..+.+
T Consensus 83 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~g~iv~iss~~~~~~~~ 154 (255)
T PRK07523 83 AEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARG--------AGKIINIASVQSALARP 154 (255)
T ss_pred HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC--------CeEEEEEccchhccCCC
Confidence 9999999999999987777888889999999999999999999999999998765 58899999998888888
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhc
Q 022386 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (298)
Q Consensus 165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~ 244 (298)
....|+++|++++.++++++.|++ ++||+||+|.||+++|+........+.....+....+.+++..|+|+|+++.||+
T Consensus 155 ~~~~y~~sK~a~~~~~~~~a~e~~-~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~ 233 (255)
T PRK07523 155 GIAPYTATKGAVGNLTKGMATDWA-KHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVFLA 233 (255)
T ss_pred CCccHHHHHHHHHHHHHHHHHHhh-HhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence 899999999999999999999997 7899999999999998865433333444556666778899999999999999999
Q ss_pred CCCCCCccccEEEeCCCCCCC
Q 022386 245 SDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 245 s~~~~~~~G~~i~~dgG~~~~ 265 (298)
++.+.+++|+.+.+|||...+
T Consensus 234 ~~~~~~~~G~~i~~~gg~~~~ 254 (255)
T PRK07523 234 SDASSFVNGHVLYVDGGITAS 254 (255)
T ss_pred CchhcCccCcEEEECCCeecc
Confidence 998899999999999997643
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-43 Score=306.61 Aligned_cols=248 Identities=24% Similarity=0.340 Sum_probs=212.2
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh---------hHHHHHHHHHHhCCCCeEEEEccCCCHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK---------TVLRSAVAALHSLGIPAIGLEGDVRKREDAVR 78 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~ 78 (298)
..|++|+++||||++|||+++|+.|+++|++|++++++. +.+++..+++...+.++.++.||++|++++++
T Consensus 2 ~~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~ 81 (286)
T PRK07791 2 GLLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAAN 81 (286)
T ss_pred CccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHH
Confidence 458899999999999999999999999999999998876 66777778887777788899999999999999
Q ss_pred HHHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccc
Q 022386 79 VVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (298)
Q Consensus 79 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~ 158 (298)
+++.+.+.++++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|.++... .....|+||++||..
T Consensus 82 ~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~--~~~~~g~Iv~isS~~ 159 (286)
T PRK07791 82 LVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKA--GRAVDARIINTSSGA 159 (286)
T ss_pred HHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhccc--CCCCCcEEEEeCchh
Confidence 999999999999999999998776778889999999999999999999999999999764210 001147899999999
Q ss_pred cccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCC--CCCCHHHH
Q 022386 159 HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY--KFGEKWDI 236 (298)
Q Consensus 159 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~dv 236 (298)
+..+.+.+..|++||+|+.+|+++++.|++ ++|||||+|+|| +.|++... .........+.. +..+|+|+
T Consensus 160 ~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~v~Pg-~~T~~~~~------~~~~~~~~~~~~~~~~~~pedv 231 (286)
T PRK07791 160 GLQGSVGQGNYSAAKAGIAALTLVAAAELG-RYGVTVNAIAPA-ARTRMTET------VFAEMMAKPEEGEFDAMAPENV 231 (286)
T ss_pred hCcCCCCchhhHHHHHHHHHHHHHHHHHHH-HhCeEEEEECCC-CCCCcchh------hHHHHHhcCcccccCCCCHHHH
Confidence 999989999999999999999999999998 789999999999 77765321 111111222322 45799999
Q ss_pred HHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 237 AMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 237 a~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
+++++||+++.+.+++|+.|.+|||....
T Consensus 232 a~~~~~L~s~~~~~itG~~i~vdgG~~~~ 260 (286)
T PRK07791 232 SPLVVWLGSAESRDVTGKVFEVEGGKISV 260 (286)
T ss_pred HHHHHHHhCchhcCCCCcEEEEcCCceEE
Confidence 99999999998999999999999997763
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-43 Score=306.72 Aligned_cols=247 Identities=28% Similarity=0.368 Sum_probs=215.3
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh--hHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK--TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
+..|++|+++||||++|||++++++|+++|++|++++|+. +..+++.+.+...+.++.++.||+++++++.++++++.
T Consensus 44 ~~~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 123 (294)
T PRK07985 44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAH 123 (294)
T ss_pred CCccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 3468999999999999999999999999999999987653 34556666666667778899999999999999999999
Q ss_pred HHhCCccEEEECCCCC-CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 85 NHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 85 ~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
+.++++|++|||||.. ...++.+.+.++|++.+++|+.++++++++++|+|.+ +|+||++||..+..+.
T Consensus 124 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~----------~g~iv~iSS~~~~~~~ 193 (294)
T PRK07985 124 KALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK----------GASIITTSSIQAYQPS 193 (294)
T ss_pred HHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc----------CCEEEEECCchhccCC
Confidence 9999999999999974 3456778899999999999999999999999999964 4789999999999888
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHh
Q 022386 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (298)
Q Consensus 164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L 243 (298)
+....|++||+|++.++++++.|++ ++||+||+|.||+++|++......+++..+.+....+.+++.+|+|+|+++.||
T Consensus 194 ~~~~~Y~asKaal~~l~~~la~el~-~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~~~fL 272 (294)
T PRK07985 194 PHLLDYAATKAAILNYSRGLAKQVA-EKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYL 272 (294)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHh-HhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCCCCCCCHHHHHHHHHhh
Confidence 8889999999999999999999998 789999999999999986432222334445566677888999999999999999
Q ss_pred cCCCCCCccccEEEeCCCCCC
Q 022386 244 ASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 244 ~s~~~~~~~G~~i~~dgG~~~ 264 (298)
+++.+.+++|+.|.+|||..+
T Consensus 273 ~s~~~~~itG~~i~vdgG~~~ 293 (294)
T PRK07985 273 ASQESSYVTAEVHGVCGGEHL 293 (294)
T ss_pred hChhcCCccccEEeeCCCeeC
Confidence 999999999999999999754
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-43 Score=303.39 Aligned_cols=248 Identities=33% Similarity=0.445 Sum_probs=219.4
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.+.+.++.+++||++++++++++++++.+.++
T Consensus 7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 86 (278)
T PRK08277 7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFG 86 (278)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 67899999999999999999999999999999999998888888888877777889999999999999999999999999
Q ss_pred CccEEEECCCCCCC---------------CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEE
Q 022386 89 KLDILVNAAAGNFL---------------VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIIN 153 (298)
Q Consensus 89 ~id~li~~ag~~~~---------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~ 153 (298)
++|++|||||.... .++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||+
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--------~g~ii~ 158 (278)
T PRK08277 87 PCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRK--------GGNIIN 158 (278)
T ss_pred CCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC--------CcEEEE
Confidence 99999999996432 2456778899999999999999999999999998765 589999
Q ss_pred ecccccccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC-----hHHHHHHHhhhccCC
Q 022386 154 ISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYMAAY 228 (298)
Q Consensus 154 vss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~-----~~~~~~~~~~~~~~~ 228 (298)
+||..+..+.+....|++||+|++.++++++.|++ +.|||||+|+||+++|++...... ..+..+......|.+
T Consensus 159 isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~-~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 237 (278)
T PRK08277 159 ISSMNAFTPLTKVPAYSAAKAAISNFTQWLAVHFA-KVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMG 237 (278)
T ss_pred EccchhcCCCCCCchhHHHHHHHHHHHHHHHHHhC-ccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCCcc
Confidence 99999999988899999999999999999999998 789999999999999986432211 122334445567889
Q ss_pred CCCCHHHHHHHHHHhcCC-CCCCccccEEEeCCCCCCC
Q 022386 229 KFGEKWDIAMAALYLASD-AGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 229 ~~~~~~dva~~~~~L~s~-~~~~~~G~~i~~dgG~~~~ 265 (298)
++.+|+|+|++++||+++ .+.++||+.|.+|||.+..
T Consensus 238 r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG~~~~ 275 (278)
T PRK08277 238 RFGKPEELLGTLLWLADEKASSFVTGVVLPVDGGFSAY 275 (278)
T ss_pred CCCCHHHHHHHHHHHcCccccCCcCCCEEEECCCeecc
Confidence 999999999999999999 8999999999999998764
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-43 Score=302.26 Aligned_cols=243 Identities=25% Similarity=0.245 Sum_probs=202.2
Q ss_pred CCCCCCcEEEEecC--CchhHHHHHHHHHHcCCcEEEEcCCh--hHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGG--GSGIGFEISLQLGKHGAAIAIMGRRK--TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES 82 (298)
Q Consensus 7 ~~~l~gk~~lVtG~--t~giG~~ia~~l~~~G~~Vv~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~ 82 (298)
|+.|++|+++|||+ ++|||+++|+.|+++|++|++++|+. +.++++.+++ +.++.+++||++|++++++++++
T Consensus 2 ~~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~i~~~~~~ 78 (256)
T PRK07889 2 MGLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL---PEPAPVLELDVTNEEHLASLADR 78 (256)
T ss_pred cccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc---CCCCcEEeCCCCCHHHHHHHHHH
Confidence 35689999999999 89999999999999999999998764 2234433333 33577899999999999999999
Q ss_pred HHHHhCCccEEEECCCCCCC----CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccc
Q 022386 83 TINHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (298)
Q Consensus 83 ~~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~ 158 (298)
+.+.++++|++|||||+... .++.+.+.++|++++++|+.+++++++.++|+|++ +|+||++++..
T Consensus 79 ~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~----------~g~Iv~is~~~ 148 (256)
T PRK07889 79 VREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE----------GGSIVGLDFDA 148 (256)
T ss_pred HHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc----------CceEEEEeecc
Confidence 99999999999999997643 35667789999999999999999999999999973 47899998653
Q ss_pred cccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCC-CCCCHHHHH
Q 022386 159 HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY-KFGEKWDIA 237 (298)
Q Consensus 159 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva 237 (298)
..+.+.+..|++||+|+.+|+++++.|++ ++|||||+|+||+++|++.......++..+......|.+ ++.+|+|+|
T Consensus 149 -~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~evA 226 (256)
T PRK07889 149 -TVAWPAYDWMGVAKAALESTNRYLARDLG-PRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPLGWDVKDPTPVA 226 (256)
T ss_pred -cccCCccchhHHHHHHHHHHHHHHHHHhh-hcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCccccccCCHHHHH
Confidence 34556677899999999999999999998 889999999999999986433222223333344556776 689999999
Q ss_pred HHHHHhcCCCCCCccccEEEeCCCCCC
Q 022386 238 MAALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 238 ~~~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
+.++||+++.+.+++|+.+.+|||...
T Consensus 227 ~~v~~l~s~~~~~~tG~~i~vdgg~~~ 253 (256)
T PRK07889 227 RAVVALLSDWFPATTGEIVHVDGGAHA 253 (256)
T ss_pred HHHHHHhCcccccccceEEEEcCceec
Confidence 999999999899999999999999764
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-43 Score=301.46 Aligned_cols=246 Identities=26% Similarity=0.414 Sum_probs=214.2
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
|.+|+||+++||||++|||++++++|+++|++|++++|+.... .++.+++||++++++++++++++.+.
T Consensus 1 ~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-----------~~~~~~~~D~~~~~~i~~~~~~~~~~ 69 (258)
T PRK06398 1 DLGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-----------NDVDYFKVDVSNKEQVIKGIDYVISK 69 (258)
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-----------CceEEEEccCCCHHHHHHHHHHHHHH
Confidence 3468999999999999999999999999999999999985421 25788999999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
++++|++|||||+....++.+.+.++|++++++|+.++++++++++|+|.+++ .|+||++||..+..+.+.+
T Consensus 70 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~ 141 (258)
T PRK06398 70 YGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQD--------KGVIINIASVQSFAVTRNA 141 (258)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--------CeEEEEeCcchhccCCCCC
Confidence 99999999999987777888899999999999999999999999999998765 6899999999999888899
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC------ChHHH---HHHHhhhccCCCCCCHHHHH
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL------APEEI---RSKATDYMAAYKFGEKWDIA 237 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~------~~~~~---~~~~~~~~~~~~~~~~~dva 237 (298)
..|++||++++.++++++.|+. ++ |+||+|+||+++|++..... .++.. ...+....+.+++.+|+|++
T Consensus 142 ~~Y~~sKaal~~~~~~la~e~~-~~-i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva 219 (258)
T PRK06398 142 AAYVTSKHAVLGLTRSIAVDYA-PT-IRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVA 219 (258)
T ss_pred chhhhhHHHHHHHHHHHHHHhC-CC-CEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCHHHHH
Confidence 9999999999999999999997 64 99999999999988643211 11111 12234456788999999999
Q ss_pred HHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchh
Q 022386 238 MAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKE 273 (298)
Q Consensus 238 ~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~ 273 (298)
++++||+++.+.+++|+.+.+|||.....|+-+||.
T Consensus 220 ~~~~~l~s~~~~~~~G~~i~~dgg~~~~~~~~~~~~ 255 (258)
T PRK06398 220 YVVAFLASDLASFITGECVTVDGGLRALIPLSTPKI 255 (258)
T ss_pred HHHHHHcCcccCCCCCcEEEECCccccCCCCCCCCc
Confidence 999999999899999999999999988777777653
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-42 Score=297.38 Aligned_cols=243 Identities=32% Similarity=0.398 Sum_probs=209.3
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEc-CChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH--
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMG-RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH-- 86 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~-r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~-- 86 (298)
|++|+++||||++|||+++++.|+++|++|+++. ++.+..++...++...+.++..+.+|+++.++++.+++++.+.
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 81 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence 5789999999999999999999999999998875 5666777777777776777888999999999999999988763
Q ss_pred --hC--CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC
Q 022386 87 --FG--KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (298)
Q Consensus 87 --~~--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~ 162 (298)
++ ++|++|||||.....++.+.+.++|++++++|+.++++++++++|.|++ .|+||++||..+..+
T Consensus 82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~----------~g~iv~isS~~~~~~ 151 (252)
T PRK12747 82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD----------NSRIINISSAATRIS 151 (252)
T ss_pred hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc----------CCeEEEECCcccccC
Confidence 34 8999999999866667788899999999999999999999999999964 478999999999988
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHH
Q 022386 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (298)
Q Consensus 163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 242 (298)
.+....|++||++++.++++++.|++ ++|||||+|+||+++|++.......+..........+.+++.+|+|+++++.|
T Consensus 152 ~~~~~~Y~~sKaa~~~~~~~la~e~~-~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 230 (252)
T PRK12747 152 LPDFIAYSMTKGAINTMTFTLAKQLG-ARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAF 230 (252)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHHh-HcCCEEEEEecCCccCchhhhcccCHHHHHHHHhcCcccCCCCHHHHHHHHHH
Confidence 88899999999999999999999998 88999999999999998654322222222222233467889999999999999
Q ss_pred hcCCCCCCccccEEEeCCCCC
Q 022386 243 LASDAGKYVNGNTLIVDGGNW 263 (298)
Q Consensus 243 L~s~~~~~~~G~~i~~dgG~~ 263 (298)
|+++.+.+++|+.+.+|||..
T Consensus 231 l~s~~~~~~~G~~i~vdgg~~ 251 (252)
T PRK12747 231 LASPDSRWVTGQLIDVSGGSC 251 (252)
T ss_pred HcCccccCcCCcEEEecCCcc
Confidence 999988999999999999964
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-42 Score=297.02 Aligned_cols=248 Identities=27% Similarity=0.385 Sum_probs=222.1
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
++|++|+++||||++|||.+++++|+++|++|++++|+.+.+++..+.+.+.+.++.++.+|+++.++++++++.+.+.+
T Consensus 3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 82 (253)
T PRK06172 3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAY 82 (253)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 56889999999999999999999999999999999999888888888887777789999999999999999999999999
Q ss_pred CCccEEEECCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 88 GKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 88 ~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
+++|++|||+|.... .++.+.+.++|++.+++|+.++++++++++|+|.+++ .++||++||..+..+.+.+
T Consensus 83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--------~~~ii~~sS~~~~~~~~~~ 154 (253)
T PRK06172 83 GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQG--------GGAIVNTASVAGLGAAPKM 154 (253)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--------CcEEEEECchhhccCCCCC
Confidence 999999999997543 4467788999999999999999999999999998765 5889999999999898999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC-hHHHHHHHhhhccCCCCCCHHHHHHHHHHhcC
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s 245 (298)
..|+++|++++.++++++.|+. ++||+|++|+||+++|++...... .++..+.+....+..++.+|+|+++.+.||++
T Consensus 155 ~~Y~~sKaa~~~~~~~la~e~~-~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ia~~~~~l~~ 233 (253)
T PRK06172 155 SIYAASKHAVIGLTKSAAIEYA-KKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYLCS 233 (253)
T ss_pred chhHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCCCCccCHHHHHHHHHHHhC
Confidence 9999999999999999999997 789999999999999987654322 34444555566788899999999999999999
Q ss_pred CCCCCccccEEEeCCCCCC
Q 022386 246 DAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 246 ~~~~~~~G~~i~~dgG~~~ 264 (298)
+.+.+++|++|.+|||.++
T Consensus 234 ~~~~~~~G~~i~~dgg~~~ 252 (253)
T PRK06172 234 DGASFTTGHALMVDGGATA 252 (253)
T ss_pred ccccCcCCcEEEECCCccC
Confidence 9899999999999999754
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-44 Score=304.03 Aligned_cols=233 Identities=33% Similarity=0.466 Sum_probs=210.4
Q ss_pred cCC--chhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh-CCccEEEE
Q 022386 19 GGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVN 95 (298)
Q Consensus 19 G~t--~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-~~id~li~ 95 (298)
|++ +|||+++|++|+++|++|++++|+.+++++..+++.+..+ ...+.||++++++++++++++.+.+ |++|++||
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~-~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~ 79 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG-AEVIQCDLSDEESVEALFDEAVERFGGRIDILVN 79 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT-SEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC-CceEeecCcchHHHHHHHHHHHhhcCCCeEEEEe
Confidence 566 9999999999999999999999999887666666655433 2259999999999999999999999 99999999
Q ss_pred CCCCCCC----CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHH
Q 022386 96 AAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (298)
Q Consensus 96 ~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~ 171 (298)
|++.... .++.+.+.++|++.+++|+.+++.+++++.|+|.+ +|+||+++|..+..+.+....|++
T Consensus 80 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~gsii~iss~~~~~~~~~~~~y~~ 149 (241)
T PF13561_consen 80 NAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKK----------GGSIINISSIAAQRPMPGYSAYSA 149 (241)
T ss_dssp EEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHH----------EEEEEEEEEGGGTSBSTTTHHHHH
T ss_pred cccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh----------CCCcccccchhhcccCccchhhHH
Confidence 9997654 77788889999999999999999999999998887 488999999999989999999999
Q ss_pred HHHHHHHHHHHHHHHhcCC-CCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCCCC
Q 022386 172 AKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKY 250 (298)
Q Consensus 172 sK~a~~~l~~~la~e~~~~-~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~ 250 (298)
+|+|++.|+++++.||+ + +|||||+|+||+++|++.......++..+......|++++.+|+|||++++||+|+.+++
T Consensus 150 sKaal~~l~r~lA~el~-~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~evA~~v~fL~s~~a~~ 228 (241)
T PF13561_consen 150 SKAALEGLTRSLAKELA-PKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLGRLGTPEEVANAVLFLASDAASY 228 (241)
T ss_dssp HHHHHHHHHHHHHHHHG-GHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHHHHhc-cccCeeeeeecccceeccchhccccccchhhhhhhhhccCCCcCHHHHHHHHHHHhCccccC
Confidence 99999999999999998 8 899999999999998865444345777888889999999999999999999999999999
Q ss_pred ccccEEEeCCCCC
Q 022386 251 VNGNTLIVDGGNW 263 (298)
Q Consensus 251 ~~G~~i~~dgG~~ 263 (298)
+||++|.+|||.+
T Consensus 229 itG~~i~vDGG~s 241 (241)
T PF13561_consen 229 ITGQVIPVDGGFS 241 (241)
T ss_dssp GTSEEEEESTTGG
T ss_pred ccCCeEEECCCcC
Confidence 9999999999974
|
... |
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-42 Score=298.87 Aligned_cols=247 Identities=27% Similarity=0.342 Sum_probs=211.6
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
|.++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++ +.++.+++||++++++++++++.+.+.
T Consensus 1 m~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 77 (261)
T PRK08265 1 MIGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL---GERARFIATDITDDAAIERAVATVVAR 77 (261)
T ss_pred CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCeeEEEEecCCCHHHHHHHHHHHHHH
Confidence 35688999999999999999999999999999999999987666665554 456889999999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
++++|++|||||....... +.+.++|++.+++|+.+++++++.++|.|+ +. +|+||++||..+..+.+.+
T Consensus 78 ~g~id~lv~~ag~~~~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~--------~g~ii~isS~~~~~~~~~~ 147 (261)
T PRK08265 78 FGRVDILVNLACTYLDDGL-ASSRADWLAALDVNLVSAAMLAQAAHPHLA-RG--------GGAIVNFTSISAKFAQTGR 147 (261)
T ss_pred hCCCCEEEECCCCCCCCcC-cCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cC--------CcEEEEECchhhccCCCCC
Confidence 9999999999997544433 568899999999999999999999999997 33 5899999999999888889
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCCh-HHHHHHH-hhhccCCCCCCHHHHHHHHHHhc
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKA-TDYMAAYKFGEKWDIAMAALYLA 244 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~dva~~~~~L~ 244 (298)
..|+++|+++..++++++.|++ ++||+||+|+||+++|++....... .+..... ....+.+++.+|+|+|++++||+
T Consensus 148 ~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~ 226 (261)
T PRK08265 148 WLYPASKAAIRQLTRSMAMDLA-PDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFLC 226 (261)
T ss_pred chhHHHHHHHHHHHHHHHHHhc-ccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCCCCCccCHHHHHHHHHHHc
Confidence 9999999999999999999998 7899999999999998864322111 1111222 23457889999999999999999
Q ss_pred CCCCCCccccEEEeCCCCCCCCC
Q 022386 245 SDAGKYVNGNTLIVDGGNWLSNP 267 (298)
Q Consensus 245 s~~~~~~~G~~i~~dgG~~~~~~ 267 (298)
++.+.+++|+.|.+|||..+..+
T Consensus 227 s~~~~~~tG~~i~vdgg~~~~~~ 249 (261)
T PRK08265 227 SDAASFVTGADYAVDGGYSALGP 249 (261)
T ss_pred CccccCccCcEEEECCCeeccCC
Confidence 99899999999999999876543
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-42 Score=294.02 Aligned_cols=248 Identities=32% Similarity=0.411 Sum_probs=221.6
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
+.+|++|+++||||++|||.+++++|+++|++|++++|+.+.++.+.+++.+.+.++.+++||+++.++++++++++.+.
T Consensus 3 ~~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (252)
T PRK07035 3 LFDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRER 82 (252)
T ss_pred ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 35789999999999999999999999999999999999988888888888777777889999999999999999999999
Q ss_pred hCCccEEEECCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC
Q 022386 87 FGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (298)
Q Consensus 87 ~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~ 165 (298)
++++|++|||||... ..++.+.+.++|++.+++|+.++++++++++|+|.++. .++|+++||..+..+.+.
T Consensus 83 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~ 154 (252)
T PRK07035 83 HGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQG--------GGSIVNVASVNGVSPGDF 154 (252)
T ss_pred cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC--------CcEEEEECchhhcCCCCC
Confidence 999999999999643 35667788999999999999999999999999998765 689999999998888888
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcC
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s 245 (298)
...|++||++++.++++++.|+. ++||+|++|+||+++|++.......++..+......+..++.+|+|+++.+.||++
T Consensus 155 ~~~Y~~sK~al~~~~~~l~~e~~-~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~ 233 (252)
T PRK07035 155 QGIYSITKAAVISMTKAFAKECA-PFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYLAS 233 (252)
T ss_pred CcchHHHHHHHHHHHHHHHHHHh-hcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCCCCcCCHHHHHHHHHHHhC
Confidence 99999999999999999999997 78999999999999988654443334445555666788899999999999999999
Q ss_pred CCCCCccccEEEeCCCCC
Q 022386 246 DAGKYVNGNTLIVDGGNW 263 (298)
Q Consensus 246 ~~~~~~~G~~i~~dgG~~ 263 (298)
+.+.+++|+.+.+|||..
T Consensus 234 ~~~~~~~g~~~~~dgg~~ 251 (252)
T PRK07035 234 DASSYTTGECLNVDGGYL 251 (252)
T ss_pred ccccCccCCEEEeCCCcC
Confidence 999999999999999953
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-42 Score=297.37 Aligned_cols=244 Identities=18% Similarity=0.257 Sum_probs=211.5
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
++++||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+ ++.+++||++|+++++++++++.+.++++|+
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~ 79 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG-EVYAVKADLSDKDDLKNLVKEAWELLGGIDA 79 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 379999999999999999999999999999999888888888886644 6888999999999999999999999999999
Q ss_pred EEECCCCCC--CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhH
Q 022386 93 LVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS 170 (298)
Q Consensus 93 li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~ 170 (298)
+|||||... ..++.+.+.++|.+.+++|+.+++++++.++|.|.+... .|+||++||..+..+.+....|+
T Consensus 80 li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~y~ 152 (259)
T PRK08340 80 LVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKM-------KGVLVYLSSVSVKEPMPPLVLAD 152 (259)
T ss_pred EEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCC-------CCEEEEEeCcccCCCCCCchHHH
Confidence 999999743 345667788999999999999999999999999864321 58999999999988888889999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC---------ChHH-HHHHHhhhccCCCCCCHHHHHHHH
Q 022386 171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---------APEE-IRSKATDYMAAYKFGEKWDIAMAA 240 (298)
Q Consensus 171 ~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~---------~~~~-~~~~~~~~~~~~~~~~~~dva~~~ 240 (298)
++|+++.+++++++.|++ ++||+||+|+||+++|++..... ..++ ..+......|.+++.+|+|+|+++
T Consensus 153 ~sKaa~~~~~~~la~e~~-~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~ 231 (259)
T PRK08340 153 VTRAGLVQLAKGVSRTYG-GKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLI 231 (259)
T ss_pred HHHHHHHHHHHHHHHHhC-CCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHHHHHHHH
Confidence 999999999999999998 88999999999999998653211 1122 223344567889999999999999
Q ss_pred HHhcCCCCCCccccEEEeCCCCCCC
Q 022386 241 LYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 241 ~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
.||+++.++++||+++.+|||....
T Consensus 232 ~fL~s~~~~~itG~~i~vdgg~~~~ 256 (259)
T PRK08340 232 AFLLSENAEYMLGSTIVFDGAMTRG 256 (259)
T ss_pred HHHcCcccccccCceEeecCCcCCC
Confidence 9999999999999999999997654
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-42 Score=302.40 Aligned_cols=247 Identities=28% Similarity=0.405 Sum_probs=216.4
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh--HHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT--VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
+..|+||++|||||++|||+++++.|+++|++|+++.++.+ ..++..+.+...+.++.++.||+++.++++++++++.
T Consensus 50 ~~~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 129 (300)
T PRK06128 50 FGRLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAV 129 (300)
T ss_pred ccccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHH
Confidence 34588999999999999999999999999999998877543 3455666777767788899999999999999999999
Q ss_pred HHhCCccEEEECCCCC-CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 85 NHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 85 ~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
+.++++|++|||||.. ...++.+.+.++|++.+++|+.++++++++++|+|.+ +++||++||..++.+.
T Consensus 130 ~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~----------~~~iv~~sS~~~~~~~ 199 (300)
T PRK06128 130 KELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP----------GASIINTGSIQSYQPS 199 (300)
T ss_pred HHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc----------CCEEEEECCccccCCC
Confidence 9999999999999975 3456778899999999999999999999999999864 4789999999999888
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHh
Q 022386 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (298)
Q Consensus 164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L 243 (298)
+....|++||++++.|+++++.|+. ++||+||+|.||+++|++.......++..+.+....+.+++.+|+|++.+++||
T Consensus 200 ~~~~~Y~asK~a~~~~~~~la~el~-~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l 278 (300)
T PRK06128 200 PTLLDYASTKAAIVAFTKALAKQVA-EKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPMKRPGQPVEMAPLYVLL 278 (300)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCCCCCCcCHHHHHHHHHHH
Confidence 8899999999999999999999997 789999999999999986533222344445566677899999999999999999
Q ss_pred cCCCCCCccccEEEeCCCCCC
Q 022386 244 ASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 244 ~s~~~~~~~G~~i~~dgG~~~ 264 (298)
+++.+.+++|+.|.+|||..+
T Consensus 279 ~s~~~~~~~G~~~~v~gg~~~ 299 (300)
T PRK06128 279 ASQESSYVTGEVFGVTGGLLL 299 (300)
T ss_pred hCccccCccCcEEeeCCCEeC
Confidence 999889999999999999764
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-42 Score=298.89 Aligned_cols=246 Identities=28% Similarity=0.338 Sum_probs=211.2
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
..|++|+++||||++|||++++++|+++|++|++++|+.+.++++.+.+ +.++.++++|++++++++++++++.+.+
T Consensus 2 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (263)
T PRK06200 2 GWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF---GDHVLVVEGDVTSYADNQRAVDQTVDAF 78 (263)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHhc
Confidence 4578999999999999999999999999999999999987766655544 4468889999999999999999999999
Q ss_pred CCccEEEECCCCCC-CCCCCCCCHHH----HHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC
Q 022386 88 GKLDILVNAAAGNF-LVPAEDLSPNG----FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (298)
Q Consensus 88 ~~id~li~~ag~~~-~~~~~~~~~~~----~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~ 162 (298)
+++|++|||||+.. ..++.+.+.++ |++++++|+.+++.+++.++|.|+++ +|+||+++|..+..+
T Consensus 79 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---------~g~iv~~sS~~~~~~ 149 (263)
T PRK06200 79 GKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS---------GGSMIFTLSNSSFYP 149 (263)
T ss_pred CCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc---------CCEEEEECChhhcCC
Confidence 99999999999754 34555566654 88999999999999999999998764 488999999999888
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC---------ChHHHHHHHhhhccCCCCCCH
Q 022386 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---------APEEIRSKATDYMAAYKFGEK 233 (298)
Q Consensus 163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~ 233 (298)
.+....|++||+++..|+++++.|++ + +||||+|.||+++|++..... ..++..+......|.+++.+|
T Consensus 150 ~~~~~~Y~~sK~a~~~~~~~la~el~-~-~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~ 227 (263)
T PRK06200 150 GGGGPLYTASKHAVVGLVRQLAYELA-P-KIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQP 227 (263)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHh-c-CcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCH
Confidence 88888999999999999999999997 6 599999999999998643210 112233445566789999999
Q ss_pred HHHHHHHHHhcCCC-CCCccccEEEeCCCCCCCCC
Q 022386 234 WDIAMAALYLASDA-GKYVNGNTLIVDGGNWLSNP 267 (298)
Q Consensus 234 ~dva~~~~~L~s~~-~~~~~G~~i~~dgG~~~~~~ 267 (298)
+|+++++.||+++. +.++||+.|.+|||..+..+
T Consensus 228 ~eva~~~~fl~s~~~~~~itG~~i~vdgG~~~~~~ 262 (263)
T PRK06200 228 EDHTGPYVLLASRRNSRALTGVVINADGGLGIRGI 262 (263)
T ss_pred HHHhhhhhheecccccCcccceEEEEcCceeeccc
Confidence 99999999999998 99999999999999887654
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-42 Score=293.66 Aligned_cols=241 Identities=26% Similarity=0.335 Sum_probs=212.8
Q ss_pred CCCCCcEEEEecCC--chhHHHHHHHHHHcCCcEEEEcCC-----------hhHHHHHHHHHHhCCCCeEEEEccCCCHH
Q 022386 8 DILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRR-----------KTVLRSAVAALHSLGIPAIGLEGDVRKRE 74 (298)
Q Consensus 8 ~~l~gk~~lVtG~t--~giG~~ia~~l~~~G~~Vv~~~r~-----------~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 74 (298)
..|+||+++||||+ +|||+++|++|+++|++|++++++ .+...+..+++.+.+.++.++++|+++.+
T Consensus 2 ~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~ 81 (256)
T PRK12859 2 NQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQND 81 (256)
T ss_pred CCcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHH
Confidence 47899999999999 499999999999999999987532 23344555667777788999999999999
Q ss_pred HHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEe
Q 022386 75 DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI 154 (298)
Q Consensus 75 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~v 154 (298)
+++++++++.+.++++|++|||||.....++.+.+.++|++.+++|+.+++++++.++|.|.++. .|+||++
T Consensus 82 ~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~g~iv~i 153 (256)
T PRK12859 82 APKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKS--------GGRIINM 153 (256)
T ss_pred HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--------CeEEEEE
Confidence 99999999999999999999999987667888899999999999999999999999999998765 6899999
Q ss_pred cccccccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHH
Q 022386 155 SATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW 234 (298)
Q Consensus 155 ss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (298)
||..+..+.+.+..|+++|+++..|+++++.|++ ++||+||+|+||+++|+... ++..+......+..++.+|+
T Consensus 154 sS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~-~~~i~v~~v~PG~i~t~~~~-----~~~~~~~~~~~~~~~~~~~~ 227 (256)
T PRK12859 154 TSGQFQGPMVGELAYAATKGAIDALTSSLAAEVA-HLGITVNAINPGPTDTGWMT-----EEIKQGLLPMFPFGRIGEPK 227 (256)
T ss_pred cccccCCCCCCchHHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEEccccCCCCC-----HHHHHHHHhcCCCCCCcCHH
Confidence 9999998888999999999999999999999997 78999999999999987432 23334455566788899999
Q ss_pred HHHHHHHHhcCCCCCCccccEEEeCCCC
Q 022386 235 DIAMAALYLASDAGKYVNGNTLIVDGGN 262 (298)
Q Consensus 235 dva~~~~~L~s~~~~~~~G~~i~~dgG~ 262 (298)
|+++.+.||+++.+.+++|++|.+|||.
T Consensus 228 d~a~~~~~l~s~~~~~~~G~~i~~dgg~ 255 (256)
T PRK12859 228 DAARLIKFLASEEAEWITGQIIHSEGGF 255 (256)
T ss_pred HHHHHHHHHhCccccCccCcEEEeCCCc
Confidence 9999999999998899999999999994
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=292.34 Aligned_cols=247 Identities=41% Similarity=0.655 Sum_probs=217.1
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
||+++||||++|||+++++.|+++|++|++++|+.+.+++..+++.+.+.++.+++||++++++++++++++.+.++++|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 68999999999999999999999999999999998888888877776667789999999999999999999999999999
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHH
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~ 171 (298)
++|||+|.....++.+.+.++|++++++|+.++++++++++++|.+... .|+||++||..+..+.+....|++
T Consensus 81 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-------~g~ii~isS~~~~~~~~~~~~Y~~ 153 (252)
T PRK07677 81 ALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGI-------KGNIINMVATYAWDAGPGVIHSAA 153 (252)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCC-------CEEEEEEcChhhccCCCCCcchHH
Confidence 9999999765667778899999999999999999999999999876421 489999999999888888889999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc-CChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCCCC
Q 022386 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK-LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKY 250 (298)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~ 250 (298)
||+|++.++++++.|+...+||+||+|+||+++|+.+... ...++..+......+.+++.+|+|+++++.||+++.+.+
T Consensus 154 sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~ 233 (252)
T PRK07677 154 AKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFLLSDEAAY 233 (252)
T ss_pred HHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCccccc
Confidence 9999999999999998634699999999999986543222 223455555666778889999999999999999988889
Q ss_pred ccccEEEeCCCCCCC
Q 022386 251 VNGNTLIVDGGNWLS 265 (298)
Q Consensus 251 ~~G~~i~~dgG~~~~ 265 (298)
++|+++.+|||.++.
T Consensus 234 ~~g~~~~~~gg~~~~ 248 (252)
T PRK07677 234 INGTCITMDGGQWLN 248 (252)
T ss_pred cCCCEEEECCCeecC
Confidence 999999999998874
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-42 Score=289.75 Aligned_cols=224 Identities=26% Similarity=0.307 Sum_probs=203.4
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC-CCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
..+++++++|||||+|||+++|+.|+++|++|++++|+.++++++.+++.+. +.+++.+.+|+++.+++.++.+++.++
T Consensus 2 ~~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~ 81 (265)
T COG0300 2 GPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKER 81 (265)
T ss_pred CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhc
Confidence 5678999999999999999999999999999999999999999999999875 578999999999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
+..||+||||||+...+++.+.++++.++++++|+.++..++++++|.|.+++ .|.||||+|.+++.+.|..
T Consensus 82 ~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~--------~G~IiNI~S~ag~~p~p~~ 153 (265)
T COG0300 82 GGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG--------AGHIINIGSAAGLIPTPYM 153 (265)
T ss_pred CCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------CceEEEEechhhcCCCcch
Confidence 99999999999999999999999999999999999999999999999999987 7999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
..|++||+++.+|+++|+.|+. ++||+|..++||++.|+... .... ......+...+.+|+++|+.....+..
T Consensus 154 avY~ATKa~v~~fSeaL~~EL~-~~gV~V~~v~PG~~~T~f~~-~~~~-----~~~~~~~~~~~~~~~~va~~~~~~l~~ 226 (265)
T COG0300 154 AVYSATKAFVLSFSEALREELK-GTGVKVTAVCPGPTRTEFFD-AKGS-----DVYLLSPGELVLSPEDVAEAALKALEK 226 (265)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-CCCeEEEEEecCcccccccc-cccc-----ccccccchhhccCHHHHHHHHHHHHhc
Confidence 9999999999999999999997 88999999999999988654 1111 111112345578999999999998854
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=291.49 Aligned_cols=245 Identities=35% Similarity=0.498 Sum_probs=213.6
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
+|+||+++||||++|||.+++++|+++|++|++++|+. .++..+.+...+.++.++.+|++++++++++++++.+.++
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (248)
T TIGR01832 2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE--PSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFG 79 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCch--HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 58899999999999999999999999999999999874 3455566666667789999999999999999999999999
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchh
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~ 168 (298)
++|++|||||.....++.+.+.++|++.+++|+.+++++++++++.|.+++. .|+||++||..+..+.+....
T Consensus 80 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-------~g~iv~~sS~~~~~~~~~~~~ 152 (248)
T TIGR01832 80 HIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGR-------GGKIINIASMLSFQGGIRVPS 152 (248)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC-------CeEEEEEecHHhccCCCCCch
Confidence 9999999999877677778889999999999999999999999999976431 478999999988888888889
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCC
Q 022386 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (298)
Q Consensus 169 Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~ 248 (298)
|++||+++..++++++.|+. ++||+||+|+||+++|++.......+..........+.+++.+|+|+|+++.||+++.+
T Consensus 153 Y~~sKaa~~~~~~~la~e~~-~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~ 231 (248)
T TIGR01832 153 YTASKHGVAGLTKLLANEWA-AKGINVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLASSAS 231 (248)
T ss_pred hHHHHHHHHHHHHHHHHHhC-ccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence 99999999999999999997 88999999999999998654332222323344456788899999999999999999988
Q ss_pred CCccccEEEeCCCCC
Q 022386 249 KYVNGNTLIVDGGNW 263 (298)
Q Consensus 249 ~~~~G~~i~~dgG~~ 263 (298)
.+++|+++.+|||..
T Consensus 232 ~~~~G~~i~~dgg~~ 246 (248)
T TIGR01832 232 DYVNGYTLAVDGGWL 246 (248)
T ss_pred cCcCCcEEEeCCCEe
Confidence 999999999999964
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=291.98 Aligned_cols=252 Identities=33% Similarity=0.430 Sum_probs=227.4
Q ss_pred CCCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHH
Q 022386 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 4 ~~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
.+.+..+++|+++||||+++||++++++|+++|++|++++|+.+.+++..+++...+.++.++.||+++++++.++++.+
T Consensus 3 ~~~~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 82 (256)
T PRK06124 3 ILQRFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARI 82 (256)
T ss_pred cccccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHH
Confidence 45678899999999999999999999999999999999999988888888888777778999999999999999999999
Q ss_pred HHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
.+.++++|++|||+|.....++.+.+.++|++.+++|+.+++.+.+.+++.|.++. .++||++||..+..+.
T Consensus 83 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--------~~~iv~~ss~~~~~~~ 154 (256)
T PRK06124 83 DAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQG--------YGRIIAITSIAGQVAR 154 (256)
T ss_pred HHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--------CcEEEEEeechhccCC
Confidence 99999999999999987767788889999999999999999999999999998765 5889999999998888
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHh
Q 022386 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (298)
Q Consensus 164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L 243 (298)
+....|+++|+++..+++.++.|++ ++||++++|+||+++|+.......+++.........+.+++.+++|+++.+.+|
T Consensus 155 ~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l 233 (256)
T PRK06124 155 AGDAVYPAAKQGLTGLMRALAAEFG-PHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFL 233 (256)
T ss_pred CCccHhHHHHHHHHHHHHHHHHHHH-HhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 8899999999999999999999997 779999999999999986444333445555566667888999999999999999
Q ss_pred cCCCCCCccccEEEeCCCCCC
Q 022386 244 ASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 244 ~s~~~~~~~G~~i~~dgG~~~ 264 (298)
+++.+++++|+.+.+|||..+
T Consensus 234 ~~~~~~~~~G~~i~~dgg~~~ 254 (256)
T PRK06124 234 ASPAASYVNGHVLAVDGGYSV 254 (256)
T ss_pred cCcccCCcCCCEEEECCCccc
Confidence 999999999999999999653
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=292.37 Aligned_cols=247 Identities=30% Similarity=0.422 Sum_probs=223.1
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC--CCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.|+||+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +.++.++.||++++++++++++++.+.
T Consensus 6 ~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 85 (257)
T PRK09242 6 RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDH 85 (257)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999999988888888887665 567889999999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
++++|++|||+|.....+..+.+.++|++.+++|+.++++++++++|+|++++ .++||++||..+..+.+..
T Consensus 86 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~~ii~~sS~~~~~~~~~~ 157 (257)
T PRK09242 86 WDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHA--------SSAIVNIGSVSGLTHVRSG 157 (257)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC--------CceEEEECccccCCCCCCC
Confidence 99999999999987667777889999999999999999999999999998765 5889999999998888888
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
..|+++|++++.++++++.|+. +.||++|+|+||+++|++.......++..+......+..++.+|+|+++.++||+++
T Consensus 158 ~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~ 236 (257)
T PRK09242 158 APYGMTKAALLQMTRNLAVEWA-EDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAFLCMP 236 (257)
T ss_pred cchHHHHHHHHHHHHHHHHHHH-HhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 9999999999999999999997 779999999999999987655444455555666677888999999999999999998
Q ss_pred CCCCccccEEEeCCCCCC
Q 022386 247 AGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 247 ~~~~~~G~~i~~dgG~~~ 264 (298)
...+++|+.+.+|||...
T Consensus 237 ~~~~~~g~~i~~~gg~~~ 254 (257)
T PRK09242 237 AASYITGQCIAVDGGFLR 254 (257)
T ss_pred ccccccCCEEEECCCeEe
Confidence 888999999999999654
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-41 Score=292.25 Aligned_cols=253 Identities=33% Similarity=0.449 Sum_probs=224.6
Q ss_pred CCCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHH
Q 022386 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 4 ~~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
+|+..++.+|+++||||++|||++++++|+++|++|++++|+.+++++..+.+...+.++.+++||++++++++++++++
T Consensus 2 ~~~~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 81 (265)
T PRK07097 2 SENLFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQI 81 (265)
T ss_pred CccccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence 46777889999999999999999999999999999999999988888888888777778999999999999999999999
Q ss_pred HHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
.+.++++|++|||||.....++.+.+.++|++++++|+.+++.+++.++|+|++.. .++||++||..+..+.
T Consensus 82 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~ 153 (265)
T PRK07097 82 EKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKG--------HGKIINICSMMSELGR 153 (265)
T ss_pred HHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC--------CcEEEEEcCccccCCC
Confidence 99999999999999987777888889999999999999999999999999998765 6899999999888888
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC------ChHHHHHHHhhhccCCCCCCHHHHH
Q 022386 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL------APEEIRSKATDYMAAYKFGEKWDIA 237 (298)
Q Consensus 164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~dva 237 (298)
+....|+++|+++..++++++.|+. ++||+||+|.||+++|+...... ....+...+....+..++.+|+|++
T Consensus 154 ~~~~~Y~~sKaal~~l~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva 232 (265)
T PRK07097 154 ETVSAYAAAKGGLKMLTKNIASEYG-EANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLA 232 (265)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHhh-hcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCHHHHH
Confidence 8899999999999999999999997 78999999999999988643321 1122333344556778899999999
Q ss_pred HHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 238 MAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 238 ~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
+.+.+|+++.+.+++|+.+.+|||....
T Consensus 233 ~~~~~l~~~~~~~~~g~~~~~~gg~~~~ 260 (265)
T PRK07097 233 GPAVFLASDASNFVNGHILYVDGGILAY 260 (265)
T ss_pred HHHHHHhCcccCCCCCCEEEECCCceec
Confidence 9999999998899999999999996543
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-41 Score=290.93 Aligned_cols=250 Identities=32% Similarity=0.500 Sum_probs=220.3
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh-hHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.+|++|+++||||++|||+++|+.|+++|++|++++|+. +..+...+.+...+.++.++.+|+++.++++++++.+.+.
T Consensus 3 ~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~ 82 (261)
T PRK08936 3 SDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKE 82 (261)
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Confidence 458899999999999999999999999999999988854 4566677777766777889999999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
++++|++|||||.....++.+.+.++|++.+++|+.+++++++.++++|.+... .|+||++||..+..+.+..
T Consensus 83 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~-------~g~iv~~sS~~~~~~~~~~ 155 (261)
T PRK08936 83 FGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDI-------KGNIINMSSVHEQIPWPLF 155 (261)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-------CcEEEEEccccccCCCCCC
Confidence 999999999999877777888899999999999999999999999999987531 4889999999988888889
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
..|+++|+|+..++++++.|+. +.||+|++|+||+++|++.......++.........+.+++.+++|+++.+.||+++
T Consensus 156 ~~Y~~sKaa~~~~~~~la~e~~-~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~ 234 (261)
T PRK08936 156 VHYAASKGGVKLMTETLAMEYA-PKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVAAWLASS 234 (261)
T ss_pred cccHHHHHHHHHHHHHHHHHHh-hcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 9999999999999999999997 779999999999999986544333344444455667888999999999999999999
Q ss_pred CCCCccccEEEeCCCCCCC
Q 022386 247 AGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 247 ~~~~~~G~~i~~dgG~~~~ 265 (298)
.+.+++|+.+.+|||..+.
T Consensus 235 ~~~~~~G~~i~~d~g~~~~ 253 (261)
T PRK08936 235 EASYVTGITLFADGGMTLY 253 (261)
T ss_pred ccCCccCcEEEECCCcccC
Confidence 9999999999999998764
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-42 Score=299.91 Aligned_cols=241 Identities=24% Similarity=0.290 Sum_probs=199.5
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh----------hHHHHHHHHHHhCCCCeEEEEccCCCHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK----------TVLRSAVAALHSLGIPAIGLEGDVRKREDA 76 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~----------~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~ 76 (298)
+.+|+||+++||||++|||+++|+.|+++|++|++++|+. +.+++..+.+.+.+.++.+++||+++++++
T Consensus 3 ~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v 82 (305)
T PRK08303 3 MKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQV 82 (305)
T ss_pred CcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence 4668999999999999999999999999999999999973 355666677777677788999999999999
Q ss_pred HHHHHHHHHHhCCccEEEECC-CCC----CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEE
Q 022386 77 VRVVESTINHFGKLDILVNAA-AGN----FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGII 151 (298)
Q Consensus 77 ~~~~~~~~~~~~~id~li~~a-g~~----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~i 151 (298)
+++++++.+.||++|++|||| |.. ...++.+.+.++|++.+++|+.++++++++++|+|.++. +|+|
T Consensus 83 ~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~--------~g~I 154 (305)
T PRK08303 83 RALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRP--------GGLV 154 (305)
T ss_pred HHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCC--------CcEE
Confidence 999999999999999999999 742 125677788899999999999999999999999998754 5899
Q ss_pred EEeccccccc---CCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC--ChHHHHHHHhhhcc
Q 022386 152 INISATLHYT---ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL--APEEIRSKATDYMA 226 (298)
Q Consensus 152 v~vss~~~~~---~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~ 226 (298)
|+++|..+.. +.+....|++||+|+.+|+++++.|++ +.|||||+|+||+++|++..... ..+..... ....|
T Consensus 155 V~isS~~~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~-~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~-~~~~p 232 (305)
T PRK08303 155 VEITDGTAEYNATHYRLSVFYDLAKTSVNRLAFSLAHELA-PHGATAVALTPGWLRSEMMLDAFGVTEENWRDA-LAKEP 232 (305)
T ss_pred EEECCccccccCcCCCCcchhHHHHHHHHHHHHHHHHHhh-hcCcEEEEecCCccccHHHHHhhccCccchhhh-hcccc
Confidence 9999976533 233467899999999999999999998 88999999999999998643211 11111111 12334
Q ss_pred -CCCCCCHHHHHHHHHHhcCCCC-CCccccEEE
Q 022386 227 -AYKFGEKWDIAMAALYLASDAG-KYVNGNTLI 257 (298)
Q Consensus 227 -~~~~~~~~dva~~~~~L~s~~~-~~~~G~~i~ 257 (298)
.++..+|+|++++++||+++.. .++||+.|.
T Consensus 233 ~~~~~~~peevA~~v~fL~s~~~~~~itG~~l~ 265 (305)
T PRK08303 233 HFAISETPRYVGRAVAALAADPDVARWNGQSLS 265 (305)
T ss_pred ccccCCCHHHHHHHHHHHHcCcchhhcCCcEEE
Confidence 4677899999999999999874 689999865
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-41 Score=288.71 Aligned_cols=246 Identities=31% Similarity=0.494 Sum_probs=218.9
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
+++.|++|+++||||++|||++++++|+++|++|++++|+.+..+...+++...+.++.++.||+++.++++++++.+.+
T Consensus 5 ~~~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~ 84 (255)
T PRK06113 5 DNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALS 84 (255)
T ss_pred cccCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 45568899999999999999999999999999999999998888888888877777888999999999999999999999
Q ss_pred HhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC
Q 022386 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~ 165 (298)
.++++|++|||||.....++ +.+.++|++.+++|+.+++++++++.|+|.+.+ .++||++||..+..+.+.
T Consensus 85 ~~~~~d~li~~ag~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~ 155 (255)
T PRK06113 85 KLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG--------GGVILTITSMAAENKNIN 155 (255)
T ss_pred HcCCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC--------CcEEEEEecccccCCCCC
Confidence 99999999999997655544 578899999999999999999999999997654 578999999999888888
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcC
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s 245 (298)
...|+++|+|++.++++++.++. ++||+||.|+||+++|++...... ++.........+..++.+|+|+++++.||++
T Consensus 156 ~~~Y~~sK~a~~~~~~~la~~~~-~~~i~v~~v~pg~~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~ 233 (255)
T PRK06113 156 MTSYASSKAAASHLVRNMAFDLG-EKNIRVNGIAPGAILTDALKSVIT-PEIEQKMLQHTPIRRLGQPQDIANAALFLCS 233 (255)
T ss_pred cchhHHHHHHHHHHHHHHHHHhh-hhCeEEEEEecccccccccccccC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence 89999999999999999999997 789999999999999987654332 3344445566778889999999999999999
Q ss_pred CCCCCccccEEEeCCCC
Q 022386 246 DAGKYVNGNTLIVDGGN 262 (298)
Q Consensus 246 ~~~~~~~G~~i~~dgG~ 262 (298)
+.+.+++|+.|.+|||.
T Consensus 234 ~~~~~~~G~~i~~~gg~ 250 (255)
T PRK06113 234 PAASWVSGQILTVSGGG 250 (255)
T ss_pred ccccCccCCEEEECCCc
Confidence 98999999999999994
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-41 Score=289.99 Aligned_cols=245 Identities=30% Similarity=0.399 Sum_probs=216.6
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
+|+++||||++|||+++++.|+++|++|++++|+.+.+++...++...+.++.+++||++++++++++++++.+.++++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 78999999999999999999999999999999998888888888877677788999999999999999999999999999
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHH
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~ 171 (298)
++|||||.....++.+.+.++|++.+++|+.+++.+++.+++.|++.+. .++||++||..+..+.+....|++
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~Y~~ 154 (256)
T PRK08643 82 VVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGH-------GGKIINATSQAGVVGNPELAVYSS 154 (256)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-------CCEEEEECccccccCCCCCchhHH
Confidence 9999999877777888899999999999999999999999999976531 478999999999888888899999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC---------ChHHHHHHHhhhccCCCCCCHHHHHHHHHH
Q 022386 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---------APEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (298)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 242 (298)
+|++++.+++.++.|+. ++||+||+|+||+++|++..... ..+.....+....+.+++.+|+|+++.+.|
T Consensus 155 sK~a~~~~~~~la~e~~-~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~ 233 (256)
T PRK08643 155 TKFAVRGLTQTAARDLA-SEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSF 233 (256)
T ss_pred HHHHHHHHHHHHHHHhc-ccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCHHHHHHHHHH
Confidence 99999999999999997 88999999999999988653211 111112334455678889999999999999
Q ss_pred hcCCCCCCccccEEEeCCCCCC
Q 022386 243 LASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 243 L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
|+++.+.+++|+.|.+|||.+.
T Consensus 234 L~~~~~~~~~G~~i~vdgg~~~ 255 (256)
T PRK08643 234 LAGPDSDYITGQTIIVDGGMVF 255 (256)
T ss_pred HhCccccCccCcEEEeCCCeec
Confidence 9999999999999999999653
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-41 Score=289.99 Aligned_cols=244 Identities=25% Similarity=0.310 Sum_probs=213.5
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC-CCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
+|++|+++|||+++|||+++++.|+++|++|++++|+.+++++..+++... +.++.++.+|++++++++++++. +
T Consensus 4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~----~ 79 (259)
T PRK06125 4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE----A 79 (259)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH----h
Confidence 578999999999999999999999999999999999988888877777654 55688999999999999888763 5
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
+++|++|||+|.....++.+.+.++|+.++++|+.++++++++++|.|.+++ .|+||+++|..+..+.+.+.
T Consensus 80 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--------~g~iv~iss~~~~~~~~~~~ 151 (259)
T PRK06125 80 GDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARG--------SGVIVNVIGAAGENPDADYI 151 (259)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--------CcEEEEecCccccCCCCCch
Confidence 8999999999987777888899999999999999999999999999998764 58899999998888877888
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc--------CChHHHHHHHhhhccCCCCCCHHHHHHH
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK--------LAPEEIRSKATDYMAAYKFGEKWDIAMA 239 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (298)
.|+++|+|++.++++++.|+. +.|||||+|+||+++|+..... ..+++....+....+.+++.+|+|+++.
T Consensus 152 ~y~ask~al~~~~~~la~e~~-~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~ 230 (259)
T PRK06125 152 CGSAGNAALMAFTRALGGKSL-DDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADL 230 (259)
T ss_pred HhHHHHHHHHHHHHHHHHHhC-ccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHH
Confidence 999999999999999999997 8899999999999998853321 1123333444556678899999999999
Q ss_pred HHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 240 ALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 240 ~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
++||+++.+.+++|+.|.+|||....
T Consensus 231 ~~~l~~~~~~~~~G~~i~vdgg~~~~ 256 (259)
T PRK06125 231 VAFLASPRSGYTSGTVVTVDGGISAR 256 (259)
T ss_pred HHHHcCchhccccCceEEecCCeeec
Confidence 99999998999999999999997764
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-41 Score=288.37 Aligned_cols=247 Identities=28% Similarity=0.443 Sum_probs=218.4
Q ss_pred CCCCCCcEEEEecCCc-hhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHh-CC-CCeEEEEccCCCHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGS-GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LG-IPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~-giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~-~~-~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
...+++|+++||||++ |||+++++.|+++|++|++++|+.+.+++..+.+.+ .+ .++.++++|++++++++++++.+
T Consensus 12 ~~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 91 (262)
T PRK07831 12 HGLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAA 91 (262)
T ss_pred ccccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence 4567899999999985 999999999999999999999998888887777765 33 46888999999999999999999
Q ss_pred HHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
.+.++++|++|||+|.....++.+.+.++|++.+++|+.+++.+++.++|.|..... .|+||+++|..+..+.
T Consensus 92 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-------~g~iv~~ss~~~~~~~ 164 (262)
T PRK07831 92 VERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGH-------GGVIVNNASVLGWRAQ 164 (262)
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-------CcEEEEeCchhhcCCC
Confidence 999999999999999876677888899999999999999999999999999986531 4789999999988888
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHh
Q 022386 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (298)
Q Consensus 164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L 243 (298)
+....|+++|+|+++++++++.|++ ++|||||+|+||+++|++.... .+++..+.+....+++++.+|+|++++++||
T Consensus 165 ~~~~~Y~~sKaal~~~~~~la~e~~-~~gI~v~~i~Pg~~~t~~~~~~-~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l 242 (262)
T PRK07831 165 HGQAHYAAAKAGVMALTRCSALEAA-EYGVRINAVAPSIAMHPFLAKV-TSAELLDELAAREAFGRAAEPWEVANVIAFL 242 (262)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHhC-ccCeEEEEEeeCCccCcccccc-cCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 8899999999999999999999998 8899999999999999865433 2344455555667889999999999999999
Q ss_pred cCCCCCCccccEEEeCCCC
Q 022386 244 ASDAGKYVNGNTLIVDGGN 262 (298)
Q Consensus 244 ~s~~~~~~~G~~i~~dgG~ 262 (298)
+++.+.++||+.|.+|+++
T Consensus 243 ~s~~~~~itG~~i~v~~~~ 261 (262)
T PRK07831 243 ASDYSSYLTGEVVSVSSQH 261 (262)
T ss_pred cCchhcCcCCceEEeCCCC
Confidence 9999999999999999974
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-42 Score=299.92 Aligned_cols=249 Identities=27% Similarity=0.311 Sum_probs=197.6
Q ss_pred CCCCCCCCcEEEEecCC--chhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHH----------HhCCC-----------
Q 022386 5 FKGDILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL----------HSLGI----------- 61 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t--~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~----------~~~~~----------- 61 (298)
|.+.+|+||+++|||++ +|||+++|+.|+++|++|++.++.. .+....... ...+.
T Consensus 1 ~~~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 79 (299)
T PRK06300 1 MLKIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMD 79 (299)
T ss_pred CCCcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhh
Confidence 45778999999999996 9999999999999999999976531 111110000 00001
Q ss_pred ----CeEEEEccCCC--------HHHHHHHHHHHHHHhCCccEEEECCCCCC--CCCCCCCCHHHHHHHHHhhhHHHHHH
Q 022386 62 ----PAIGLEGDVRK--------REDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIM 127 (298)
Q Consensus 62 ----~~~~~~~Dls~--------~~~~~~~~~~~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l 127 (298)
+..-+.+|+++ .++++++++++.++||++|++|||||... ..++.+.+.++|++.+++|+.+++++
T Consensus 80 ~d~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l 159 (299)
T PRK06300 80 ASFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSL 159 (299)
T ss_pred hhcCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHH
Confidence 11122222222 24699999999999999999999998653 46788899999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch-hhHHHHHHHHHHHHHHHHHhcCC-CCeEEEEEeCCcccC
Q 022386 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI-HVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKD 205 (298)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~-~Y~~sK~a~~~l~~~la~e~~~~-~girv~~i~PG~v~t 205 (298)
+++++|+|++ +|+||+++|..+..+.+... .|++||+|+.+|+++++.|++ + +|||||+|+||+++|
T Consensus 160 ~~a~~p~m~~----------~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~-~~~gIrVn~V~PG~v~T 228 (299)
T PRK06300 160 LSHFGPIMNP----------GGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAG-RRWGIRVNTISAGPLAS 228 (299)
T ss_pred HHHHHHHhhc----------CCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEEeCCccC
Confidence 9999999964 47899999999888877764 899999999999999999997 5 599999999999999
Q ss_pred CcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 206 TAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
++.......++..+......+.++..+|+|+++.++||+++.+.++||+.+.+|||..+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~~ 288 (299)
T PRK06300 229 RAGKAIGFIERMVDYYQDWAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGANVM 288 (299)
T ss_pred hhhhcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCccee
Confidence 864322112333344455678889999999999999999999999999999999998873
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-44 Score=274.05 Aligned_cols=243 Identities=28% Similarity=0.368 Sum_probs=222.1
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.-+|.|+.+++||+.-|||+++++.|++.|++|+.+.|+++.+..+.++. ...+..+..|+++++.+.+++...
T Consensus 2 ~t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~---p~~I~Pi~~Dls~wea~~~~l~~v--- 75 (245)
T KOG1207|consen 2 KTSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET---PSLIIPIVGDLSAWEALFKLLVPV--- 75 (245)
T ss_pred cccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC---CcceeeeEecccHHHHHHHhhccc---
Confidence 34689999999999999999999999999999999999998777665544 445889999999987777766543
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
+.+|.+|||||+...+++.+.+.++++..|++|+++.+++.|...+.+..+.. .|.||++||..+.++....
T Consensus 76 -~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~-------~GaIVNvSSqas~R~~~nH 147 (245)
T KOG1207|consen 76 -FPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQI-------KGAIVNVSSQASIRPLDNH 147 (245)
T ss_pred -CchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccC-------CceEEEecchhcccccCCc
Confidence 69999999999998899999999999999999999999999998776665532 5789999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
..||++|+|+++++++++.|++ +++||||+++|-.+.|+|....+.++.......+++|+++|.+.+++.+++.||+|+
T Consensus 148 tvYcatKaALDmlTk~lAlELG-p~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~rFaEV~eVVnA~lfLLSd 226 (245)
T KOG1207|consen 148 TVYCATKAALDMLTKCLALELG-PQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLKRFAEVDEVVNAVLFLLSD 226 (245)
T ss_pred eEEeecHHHHHHHHHHHHHhhC-cceeEeeccCCeEEEecccccccCCchhccchhhhCchhhhhHHHHHHhhheeeeec
Confidence 9999999999999999999998 889999999999999999999999999989999999999999999999999999999
Q ss_pred CCCCccccEEEeCCCCCC
Q 022386 247 AGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 247 ~~~~~~G~~i~~dgG~~~ 264 (298)
.++..||..+.++||+|.
T Consensus 227 ~ssmttGstlpveGGfs~ 244 (245)
T KOG1207|consen 227 NSSMTTGSTLPVEGGFSN 244 (245)
T ss_pred CcCcccCceeeecCCccC
Confidence 999999999999999985
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-41 Score=289.56 Aligned_cols=243 Identities=31% Similarity=0.455 Sum_probs=207.2
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
++|++|+++||||++|||+++|++|+++|++|+++.++.+.. .+.+.+. .+.++.||++|+++++++++++.+.+
T Consensus 3 ~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~ 77 (255)
T PRK06463 3 MRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELREK--GVFTIKCDVGNRDQVKKSKEVVEKEF 77 (255)
T ss_pred CCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHhC--CCeEEEecCCCHHHHHHHHHHHHHHc
Confidence 457899999999999999999999999999999887765422 2333332 47789999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc-CCCCc
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-ATWYQ 166 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~-~~~~~ 166 (298)
+++|++|||||.....++.+.+.++|++.+++|+.+++++++.++|.|++++ .|+||++||..+.. +.+..
T Consensus 78 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~--------~g~iv~isS~~~~~~~~~~~ 149 (255)
T PRK06463 78 GRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK--------NGAIVNIASNAGIGTAAEGT 149 (255)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC--------CcEEEEEcCHHhCCCCCCCc
Confidence 9999999999987667777889999999999999999999999999998654 68999999988764 34567
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCCh---HHHHHHHhhhccCCCCCCHHHHHHHHHHh
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP---EEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~~~~L 243 (298)
..|++||+|+++++++++.|++ ++||+||.|+||+++|++......+ +...+.+....+.+++.+|+|+++.++||
T Consensus 150 ~~Y~asKaa~~~~~~~la~e~~-~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l 228 (255)
T PRK06463 150 TFYAITKAGIIILTRRLAFELG-KYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFL 228 (255)
T ss_pred cHhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcCCCcCHHHHHHHHHHH
Confidence 8899999999999999999997 7899999999999998865332222 22334455667888999999999999999
Q ss_pred cCCCCCCccccEEEeCCCCCC
Q 022386 244 ASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 244 ~s~~~~~~~G~~i~~dgG~~~ 264 (298)
+++.+.+++|+.+.+|||..-
T Consensus 229 ~s~~~~~~~G~~~~~dgg~~~ 249 (255)
T PRK06463 229 ASDDARYITGQVIVADGGRID 249 (255)
T ss_pred cChhhcCCCCCEEEECCCeee
Confidence 999889999999999999653
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-41 Score=288.96 Aligned_cols=246 Identities=33% Similarity=0.450 Sum_probs=215.6
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
+.+++|+++||||++|||+++++.|+++|++|++++|+.+..++..+.+ +.++.++.+|++++++++++++++.+.+
T Consensus 2 ~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (257)
T PRK07067 2 MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI---GPAAIAVSLDVTRQDSIDRIVAAAVERF 78 (257)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3588999999999999999999999999999999999987777665554 3458889999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
+++|++|||||.....++.+.+.++|++.+++|+.+++.+++++++.|.++.. +++||++||..+..+.+...
T Consensus 79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~ 151 (257)
T PRK07067 79 GGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGR-------GGKIINMASQAGRRGEALVS 151 (257)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCC-------CcEEEEeCCHHhCCCCCCCc
Confidence 99999999999876677888899999999999999999999999999976531 47899999998888888899
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc---------CChHHHHHHHhhhccCCCCCCHHHHHH
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK---------LAPEEIRSKATDYMAAYKFGEKWDIAM 238 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~ 238 (298)
.|++||+++..+++.++.|+. ++||++|.|.||+++|++.... ..+.+.........|.+++.+|+|+|+
T Consensus 152 ~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 230 (257)
T PRK07067 152 HYCATKAAVISYTQSAALALI-RHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTG 230 (257)
T ss_pred hhhhhHHHHHHHHHHHHHHhc-ccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHH
Confidence 999999999999999999997 7899999999999998753221 112333444556678999999999999
Q ss_pred HHHHhcCCCCCCccccEEEeCCCCCC
Q 022386 239 AALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 239 ~~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
++.||+++.+.+++|+++++|||..+
T Consensus 231 ~~~~l~s~~~~~~~g~~~~v~gg~~~ 256 (257)
T PRK07067 231 MALFLASADADYIVAQTYNVDGGNWM 256 (257)
T ss_pred HHHHHhCcccccccCcEEeecCCEeC
Confidence 99999999899999999999999765
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-41 Score=288.15 Aligned_cols=246 Identities=28% Similarity=0.473 Sum_probs=209.8
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
|+...|++|+++||||++|||++++++|+++|++|++++|+. ..++..+++...+.++.++.||+++.++++++++++.
T Consensus 1 ~~~~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 79 (260)
T PRK12823 1 MMNQRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-LVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAV 79 (260)
T ss_pred CcccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHH
Confidence 345668899999999999999999999999999999999985 3456666676667778899999999999999999999
Q ss_pred HHhCCccEEEECCCCC-CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 85 NHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 85 ~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
+.++++|++|||||.. ...++.+.+.++|++.+++|+.+++++++.++|.|.+++ .|+||++||..+..
T Consensus 80 ~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--------~g~iv~~sS~~~~~-- 149 (260)
T PRK12823 80 EAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG--------GGAIVNVSSIATRG-- 149 (260)
T ss_pred HHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--------CCeEEEEcCccccC--
Confidence 9999999999999964 346777889999999999999999999999999998765 57899999987642
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc-----------CChHHHHHHHhhhccCCCCCC
Q 022386 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK-----------LAPEEIRSKATDYMAAYKFGE 232 (298)
Q Consensus 164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 232 (298)
+....|++||++++.|+++++.|++ ++||+||+|+||+++|++.... ...++.........+.+++.+
T Consensus 150 ~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (260)
T PRK12823 150 INRVPYSAAKGGVNALTASLAFEYA-EHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGT 228 (260)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHhc-ccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCC
Confidence 3456899999999999999999997 7899999999999999742110 001223344455678889999
Q ss_pred HHHHHHHHHHhcCCCCCCccccEEEeCCCC
Q 022386 233 KWDIAMAALYLASDAGKYVNGNTLIVDGGN 262 (298)
Q Consensus 233 ~~dva~~~~~L~s~~~~~~~G~~i~~dgG~ 262 (298)
|+|+++++.||+++.+.+++|+.+++|||.
T Consensus 229 ~~dva~~~~~l~s~~~~~~~g~~~~v~gg~ 258 (260)
T PRK12823 229 IDEQVAAILFLASDEASYITGTVLPVGGGD 258 (260)
T ss_pred HHHHHHHHHHHcCcccccccCcEEeecCCC
Confidence 999999999999998899999999999995
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-41 Score=287.42 Aligned_cols=240 Identities=30% Similarity=0.431 Sum_probs=211.5
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
++|++|+++||||++|||+++++.|+++|++|++++|+.+. ...+.++.++++|++++++++++++.+.+.+
T Consensus 2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 73 (252)
T PRK07856 2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--------TVDGRPAEFHAADVRDPDQVAALVDAIVERH 73 (252)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--------hhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 46889999999999999999999999999999999998653 1234568899999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
+++|++|||||.....++.+.+.+.|++.+++|+.+++.+++.+.+.|.++.. .|+||++||..+..+.+...
T Consensus 74 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-------~g~ii~isS~~~~~~~~~~~ 146 (252)
T PRK07856 74 GRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPG-------GGSIVNIGSVSGRRPSPGTA 146 (252)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-------CcEEEEEcccccCCCCCCCc
Confidence 99999999999877677778889999999999999999999999999986421 48899999999998888999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~ 247 (298)
.|+++|++++.|++.++.|++ +. |++|.|.||+++|++.......++....+....+.+++.+|+|+++.++||+++.
T Consensus 147 ~Y~~sK~a~~~l~~~la~e~~-~~-i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~L~~~~ 224 (252)
T PRK07856 147 AYGAAKAGLLNLTRSLAVEWA-PK-VRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGRLATPADIAWACLFLASDL 224 (252)
T ss_pred hhHHHHHHHHHHHHHHHHHhc-CC-eEEEEEEeccccChHHhhhccCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence 999999999999999999997 65 9999999999998865443333444455566678889999999999999999998
Q ss_pred CCCccccEEEeCCCCCC
Q 022386 248 GKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 248 ~~~~~G~~i~~dgG~~~ 264 (298)
+++++|+.|.+|||...
T Consensus 225 ~~~i~G~~i~vdgg~~~ 241 (252)
T PRK07856 225 ASYVSGANLEVHGGGER 241 (252)
T ss_pred cCCccCCEEEECCCcch
Confidence 89999999999999665
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-41 Score=288.28 Aligned_cols=249 Identities=27% Similarity=0.377 Sum_probs=215.8
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
|..|++|+++||||++|||++++++|+++|++|++++|+.. ..+..+.+...+.++.++.||++++++++++++++.+.
T Consensus 1 ~~~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 79 (263)
T PRK08226 1 MGKLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEK 79 (263)
T ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 35688999999999999999999999999999999999864 44555556555677889999999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc-ccCCCC
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH-YTATWY 165 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~-~~~~~~ 165 (298)
++++|++|||||.....++.+.+.+++++.+++|+.+++.+++.++++|.+.. .++||++||..+ ..+.+.
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~ 151 (263)
T PRK08226 80 EGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARK--------DGRIVMMSSVTGDMVADPG 151 (263)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC--------CcEEEEECcHHhcccCCCC
Confidence 99999999999987777788889999999999999999999999999997654 578999999877 456677
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC------ChHHHHHHHhhhccCCCCCCHHHHHHH
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL------APEEIRSKATDYMAAYKFGEKWDIAMA 239 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (298)
+..|+++|++++.++++++.|+. ++||+|++|+||+++|++..... ..++....+....|.+++.+|+|+++.
T Consensus 152 ~~~Y~~sK~a~~~~~~~la~~~~-~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~ 230 (263)
T PRK08226 152 ETAYALTKAAIVGLTKSLAVEYA-QSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGEL 230 (263)
T ss_pred cchHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHHHHHHH
Confidence 88999999999999999999997 77999999999999988643211 123344555566788899999999999
Q ss_pred HHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 240 ALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 240 ~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
+.||+++.+.+++|+.|.+|||..+.
T Consensus 231 ~~~l~~~~~~~~~g~~i~~dgg~~~~ 256 (263)
T PRK08226 231 AAFLASDESSYLTGTQNVIDGGSTLP 256 (263)
T ss_pred HHHHcCchhcCCcCceEeECCCcccC
Confidence 99999998899999999999997654
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-40 Score=284.30 Aligned_cols=247 Identities=28% Similarity=0.429 Sum_probs=216.9
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcC-ChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
+|+++||||++|||++++++|+++|++|+++.+ +.+..++..+++...+.++.++.||+++.++++++++++.+.++++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 689999999999999999999999999998865 5556777777887778889999999999999999999999999999
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhH
Q 022386 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS 170 (298)
Q Consensus 91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~ 170 (298)
|++|||+|.....++.+.+.++|++.+++|+.+++++++++.++|.+++. +|+||++||..+..+.++...|+
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-------~g~ii~isS~~~~~~~~~~~~Y~ 154 (256)
T PRK12743 82 DVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQ-------GGRIINITSVHEHTPLPGASAYT 154 (256)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-------CeEEEEEeeccccCCCCCcchhH
Confidence 99999999876667778899999999999999999999999999976431 47899999999988888899999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCCCC
Q 022386 171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKY 250 (298)
Q Consensus 171 ~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~ 250 (298)
++|+++..++++++.++. ++||++++|.||+++|+..... .++.........+..++.+|+|+++.+.||+++.+.+
T Consensus 155 ~sK~a~~~l~~~la~~~~-~~~i~v~~v~Pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~ 231 (256)
T PRK12743 155 AAKHALGGLTKAMALELV-EHGILVNAVAPGAIATPMNGMD--DSDVKPDSRPGIPLGRPGDTHEIASLVAWLCSEGASY 231 (256)
T ss_pred HHHHHHHHHHHHHHHHhh-hhCeEEEEEEeCCccCcccccc--ChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccC
Confidence 999999999999999997 7899999999999998864321 2333344445667888999999999999999998899
Q ss_pred ccccEEEeCCCCCCCCCC
Q 022386 251 VNGNTLIVDGGNWLSNPR 268 (298)
Q Consensus 251 ~~G~~i~~dgG~~~~~~~ 268 (298)
++|+.+.+|||..+..|.
T Consensus 232 ~~G~~~~~dgg~~~~~~~ 249 (256)
T PRK12743 232 TTGQSLIVDGGFMLANPQ 249 (256)
T ss_pred cCCcEEEECCCccccCCc
Confidence 999999999998876543
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-40 Score=283.75 Aligned_cols=246 Identities=37% Similarity=0.557 Sum_probs=213.5
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
++.++++|+++||||++|||.++++.|+++|++|++++|+.+. .+....+. +.++.++.+|++++++++++++++.+
T Consensus 9 ~~~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~-~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (255)
T PRK06841 9 LAFDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV-AEVAAQLL--GGNAKGLVCDVSDSQSVEAAVAAVIS 85 (255)
T ss_pred hhcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHH
Confidence 3356889999999999999999999999999999999998653 33333332 34577899999999999999999999
Q ss_pred HhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC
Q 022386 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~ 165 (298)
.++++|++|||+|.....++.+.+.++|++.+++|+.+++++++++.++|.++. .++||++||..+..+.+.
T Consensus 86 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~ 157 (255)
T PRK06841 86 AFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAG--------GGKIVNLASQAGVVALER 157 (255)
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC--------CceEEEEcchhhccCCCC
Confidence 999999999999987767777888999999999999999999999999998765 588999999998888889
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcC
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s 245 (298)
...|+++|++++.++++++.|++ ++||+||.|+||+++|++...... .+.........+.+++.+|+|+++.+++|++
T Consensus 158 ~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~ 235 (255)
T PRK06841 158 HVAYCASKAGVVGMTKVLALEWG-PYGITVNAISPTVVLTELGKKAWA-GEKGERAKKLIPAGRFAYPEEIAAAALFLAS 235 (255)
T ss_pred CchHHHHHHHHHHHHHHHHHHHH-hhCeEEEEEEeCcCcCcccccccc-hhHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence 99999999999999999999997 779999999999999886543322 2223344556788899999999999999999
Q ss_pred CCCCCccccEEEeCCCCCC
Q 022386 246 DAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 246 ~~~~~~~G~~i~~dgG~~~ 264 (298)
+.+.+++|+.|.+|||.++
T Consensus 236 ~~~~~~~G~~i~~dgg~~~ 254 (255)
T PRK06841 236 DAAAMITGENLVIDGGYTI 254 (255)
T ss_pred ccccCccCCEEEECCCccC
Confidence 9999999999999999765
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=289.06 Aligned_cols=250 Identities=28% Similarity=0.367 Sum_probs=210.6
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
...|+||+++||||++|||++++++|+++|++|++++|+.+..++..+++. .+.++.++++|++|.++++++++.+.+.
T Consensus 13 ~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 91 (280)
T PLN02253 13 SQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG-GEPNVCFFHCDVTVEDDVSRAVDFTVDK 91 (280)
T ss_pred ccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhc-CCCceEEEEeecCCHHHHHHHHHHHHHH
Confidence 457889999999999999999999999999999999998777766666663 2456889999999999999999999999
Q ss_pred hCCccEEEECCCCCCC--CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC
Q 022386 87 FGKLDILVNAAAGNFL--VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (298)
Q Consensus 87 ~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~ 164 (298)
++++|++|||||.... .++.+.+.++|++++++|+.+++++++++++.|.++. .|+||+++|..+..+.+
T Consensus 92 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--------~g~ii~isS~~~~~~~~ 163 (280)
T PLN02253 92 FGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLK--------KGSIVSLCSVASAIGGL 163 (280)
T ss_pred hCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC--------CceEEEecChhhcccCC
Confidence 9999999999997532 4577888999999999999999999999999998654 58899999999888877
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChH----HHHHH----HhhhccC-CCCCCHHH
Q 022386 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE----EIRSK----ATDYMAA-YKFGEKWD 235 (298)
Q Consensus 165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~----~~~~~----~~~~~~~-~~~~~~~d 235 (298)
....|++||++++.++++++.|++ ++||+||+|+||+++|++.....+.+ ..... .....+. ++..+|+|
T Consensus 164 ~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~d 242 (280)
T PLN02253 164 GPHAYTGSKHAVLGLTRSVAAELG-KHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDD 242 (280)
T ss_pred CCcccHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHHH
Confidence 788999999999999999999998 78999999999999988643322221 11111 1112222 45679999
Q ss_pred HHHHHHHhcCCCCCCccccEEEeCCCCCCCC
Q 022386 236 IAMAALYLASDAGKYVNGNTLIVDGGNWLSN 266 (298)
Q Consensus 236 va~~~~~L~s~~~~~~~G~~i~~dgG~~~~~ 266 (298)
+++++.||+++.+.+++|+.|.+|||.....
T Consensus 243 va~~~~~l~s~~~~~i~G~~i~vdgG~~~~~ 273 (280)
T PLN02253 243 VANAVLFLASDEARYISGLNLMIDGGFTCTN 273 (280)
T ss_pred HHHHHHhhcCcccccccCcEEEECCchhhcc
Confidence 9999999999999999999999999976643
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=288.64 Aligned_cols=233 Identities=24% Similarity=0.311 Sum_probs=198.7
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
+|+++|||+ +|||+++|++|+ +|++|++++|+.+.+++..+++...+.++.+++||++|+++++++++++ +.++++|
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~id 78 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTLGPVT 78 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-HhcCCCC
Confidence 689999998 699999999996 8999999999988888887888766778889999999999999999988 5689999
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC--------
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-------- 163 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~-------- 163 (298)
++|||||+.. ..++|++++++|+.+++++++.+.|.|.+ +|++|+++|..+..+.
T Consensus 79 ~li~nAG~~~-------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~----------~g~iv~isS~~~~~~~~~~~~~~~ 141 (275)
T PRK06940 79 GLVHTAGVSP-------SQASPEAILKVDLYGTALVLEEFGKVIAP----------GGAGVVIASQSGHRLPALTAEQER 141 (275)
T ss_pred EEEECCCcCC-------chhhHHHHHHHhhHHHHHHHHHHHHHHhh----------CCCEEEEEecccccCcccchhhhc
Confidence 9999999642 23679999999999999999999999975 3568899988776542
Q ss_pred ----------------------CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC--hHHHHH
Q 022386 164 ----------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRS 219 (298)
Q Consensus 164 ----------------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~--~~~~~~ 219 (298)
+.+..|++||+|+..++++++.|++ ++|||||+|+||+++|++...... .++...
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~ 220 (275)
T PRK06940 142 ALATTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWG-ERGARINSISPGIISTPLAQDELNGPRGDGYR 220 (275)
T ss_pred cccccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHc-cCCeEEEEeccCcCcCccchhhhcCCchHHHH
Confidence 2467899999999999999999997 789999999999999987543221 123334
Q ss_pred HHhhhccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 220 KATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 220 ~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
......|.+++.+|+|+|+.++||+++.++++||+.|.+|||....
T Consensus 221 ~~~~~~p~~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~~~~ 266 (275)
T PRK06940 221 NMFAKSPAGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGATAS 266 (275)
T ss_pred HHhhhCCcccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCeEEE
Confidence 4455678899999999999999999999999999999999997654
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-41 Score=288.58 Aligned_cols=243 Identities=28% Similarity=0.373 Sum_probs=203.0
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
.|++|+++||||++|||++++++|+++|++|++++|+.+.++++.+. .+.++.++.+|+++.++++++++++.+.++
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (262)
T TIGR03325 2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA---HGDAVVGVEGDVRSLDDHKEAVARCVAAFG 78 (262)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh---cCCceEEEEeccCCHHHHHHHHHHHHHHhC
Confidence 47899999999999999999999999999999999987666554332 345688899999999999999999999999
Q ss_pred CccEEEECCCCCCC-CCCCCCCH----HHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 89 KLDILVNAAAGNFL-VPAEDLSP----NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 89 ~id~li~~ag~~~~-~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
++|++|||||.... .++.+.+. +.|++.+++|+.++++++++++|.|.+. +|++|+++|..+..+.
T Consensus 79 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~---------~g~iv~~sS~~~~~~~ 149 (262)
T TIGR03325 79 KIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVAS---------RGSVIFTISNAGFYPN 149 (262)
T ss_pred CCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhc---------CCCEEEEeccceecCC
Confidence 99999999996432 33333333 5799999999999999999999999764 3679999999888888
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC---Ch-----HHHHHHHhhhccCCCCCCHHH
Q 022386 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---AP-----EEIRSKATDYMAAYKFGEKWD 235 (298)
Q Consensus 164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~---~~-----~~~~~~~~~~~~~~~~~~~~d 235 (298)
+....|++||+|++.|+++++.|++ ++ ||||+|+||+++|++..... .. ....+......|.+++.+|+|
T Consensus 150 ~~~~~Y~~sKaa~~~l~~~la~e~~-~~-irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~e 227 (262)
T TIGR03325 150 GGGPLYTAAKHAVVGLVKELAFELA-PY-VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEE 227 (262)
T ss_pred CCCchhHHHHHHHHHHHHHHHHhhc-cC-eEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCCCCCChHH
Confidence 8888999999999999999999997 65 99999999999998643211 11 011233345578999999999
Q ss_pred HHHHHHHhcCC-CCCCccccEEEeCCCCCCC
Q 022386 236 IAMAALYLASD-AGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 236 va~~~~~L~s~-~~~~~~G~~i~~dgG~~~~ 265 (298)
+++.++||+++ .+.++||++|.+|||..+.
T Consensus 228 va~~~~~l~s~~~~~~~tG~~i~vdgg~~~~ 258 (262)
T TIGR03325 228 YTGAYVFFATRGDTVPATGAVLNYDGGMGVR 258 (262)
T ss_pred hhhheeeeecCCCcccccceEEEecCCeeec
Confidence 99999999997 4678999999999997664
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-41 Score=283.39 Aligned_cols=198 Identities=31% Similarity=0.434 Sum_probs=180.9
Q ss_pred CCCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCC-CC-eEEEEccCCCHHHHHHHHH
Q 022386 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IP-AIGLEGDVRKREDAVRVVE 81 (298)
Q Consensus 4 ~~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~-~~~~~~Dls~~~~~~~~~~ 81 (298)
...+..++||+|+|||||+|||.++|..|+++|+.++++.|+..+++.+.+++.+.+ .+ +..++||++|+++++++++
T Consensus 4 ~~~~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~ 83 (282)
T KOG1205|consen 4 NLFMERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVE 83 (282)
T ss_pred cccHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHH
Confidence 356778999999999999999999999999999999999999999999988887753 34 8899999999999999999
Q ss_pred HHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc
Q 022386 82 STINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 161 (298)
Q Consensus 82 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~ 161 (298)
++...||++|+||||||+.......+.+.+++...|++|+.|+.+++++++|+|++++ .|+||+++|++|+.
T Consensus 84 ~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~--------~GhIVvisSiaG~~ 155 (282)
T KOG1205|consen 84 WAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN--------DGHIVVISSIAGKM 155 (282)
T ss_pred HHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC--------CCeEEEEecccccc
Confidence 9999999999999999998767777788899999999999999999999999999986 69999999999999
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHhcCCCC--eEEEEEeCCcccCCcccCc
Q 022386 162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYA--IRVNGIAPGPIKDTAGVSK 211 (298)
Q Consensus 162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~g--irv~~i~PG~v~t~~~~~~ 211 (298)
+.|....|++||+|+.+|.++++.|+. +++ |++ .|+||+|+|+.....
T Consensus 156 ~~P~~~~Y~ASK~Al~~f~etLR~El~-~~~~~i~i-~V~PG~V~Te~~~~~ 205 (282)
T KOG1205|consen 156 PLPFRSIYSASKHALEGFFETLRQELI-PLGTIIII-LVSPGPIETEFTGKE 205 (282)
T ss_pred CCCcccccchHHHHHHHHHHHHHHHhh-ccCceEEE-EEecCceeecccchh
Confidence 999999999999999999999999997 655 666 999999999855443
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=282.04 Aligned_cols=248 Identities=40% Similarity=0.600 Sum_probs=216.1
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
|+++++|+++||||++|||.+++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++++++++++++++.+.
T Consensus 4 ~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~ 83 (264)
T PRK07576 4 MFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADE 83 (264)
T ss_pred cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 34789999999999999999999999999999999999988877777777766667888999999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
++++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|.|+++ +|+||++||..+..+.+..
T Consensus 84 ~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~---------~g~iv~iss~~~~~~~~~~ 154 (264)
T PRK07576 84 FGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP---------GASIIQISAPQAFVPMPMQ 154 (264)
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC---------CCEEEEECChhhccCCCCc
Confidence 9999999999997666777788899999999999999999999999999754 4789999999888888889
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccc-CCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcC
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK-DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s 245 (298)
..|+++|++++.|+++++.|+. ++||+|+.|+||+++ |+......+.+..........+.+++.+|+|+++.+.+|++
T Consensus 155 ~~Y~asK~a~~~l~~~la~e~~-~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~ 233 (264)
T PRK07576 155 AHVCAAKAGVDMLTRTLALEWG-PEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANAALFLAS 233 (264)
T ss_pred cHHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC
Confidence 9999999999999999999997 779999999999997 43232222233333334445677889999999999999999
Q ss_pred CCCCCccccEEEeCCCCCC
Q 022386 246 DAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 246 ~~~~~~~G~~i~~dgG~~~ 264 (298)
+.+.+++|+.+.+|||..+
T Consensus 234 ~~~~~~~G~~~~~~gg~~~ 252 (264)
T PRK07576 234 DMASYITGVVLPVDGGWSL 252 (264)
T ss_pred hhhcCccCCEEEECCCccc
Confidence 8888999999999999764
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=279.78 Aligned_cols=252 Identities=29% Similarity=0.413 Sum_probs=220.8
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
++++|+++||||++|||+++++.|+++|++|++++|+.+.++++.+++...+.++.++.+|++++++++++++++.+.++
T Consensus 6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (258)
T PRK06949 6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAG 85 (258)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 57899999999999999999999999999999999998888888887776667788999999999999999999999999
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchh
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~ 168 (298)
++|++|||+|.....++.+.+.++|+.++++|+.+++.+++++++.|.++..........+++|+++|..+..+.+....
T Consensus 86 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~ 165 (258)
T PRK06949 86 TIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGL 165 (258)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCccH
Confidence 99999999998766777788889999999999999999999999999876532222223589999999998888888899
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCC
Q 022386 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (298)
Q Consensus 169 Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~ 248 (298)
|+++|+++..+++.++.+++ ++||+|+.|+||+++|++...... ++....+....+..++..|+|+++.+.||+++.+
T Consensus 166 Y~~sK~a~~~~~~~la~~~~-~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~ 243 (258)
T PRK06949 166 YCMSKAAVVHMTRAMALEWG-RHGINVNAICPGYIDTEINHHHWE-TEQGQKLVSMLPRKRVGKPEDLDGLLLLLAADES 243 (258)
T ss_pred HHHHHHHHHHHHHHHHHHHH-hcCeEEEEEeeCCCcCCcchhccC-hHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhh
Confidence 99999999999999999997 779999999999999886543322 2333455666788899999999999999999999
Q ss_pred CCccccEEEeCCCC
Q 022386 249 KYVNGNTLIVDGGN 262 (298)
Q Consensus 249 ~~~~G~~i~~dgG~ 262 (298)
++++|++|.+|||.
T Consensus 244 ~~~~G~~i~~dgg~ 257 (258)
T PRK06949 244 QFINGAIISADDGF 257 (258)
T ss_pred cCCCCcEEEeCCCC
Confidence 99999999999995
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=279.43 Aligned_cols=246 Identities=32% Similarity=0.449 Sum_probs=216.8
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEE-EcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
|.+|+++||||++|||++++++|+++|++|++ ..|+.+..++..+++++.+.++.++.||++|+++++++++++.+.++
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG 81 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 56899999999999999999999999999876 57887777888888887778899999999999999999999999999
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchh
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~ 168 (298)
++|++|||+|.....++.+.+.++++..+++|+.+++.++++++++|.+++ .|+||++||..+..+.+....
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--------~g~iv~~sS~~~~~~~~~~~~ 153 (250)
T PRK08063 82 RLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVG--------GGKIISLSSLGSIRYLENYTT 153 (250)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--------CeEEEEEcchhhccCCCCccH
Confidence 999999999987777888889999999999999999999999999998765 689999999988888788899
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCC
Q 022386 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (298)
Q Consensus 169 Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~ 248 (298)
|+++|++++.++++++.++. +.||+++.|.||+++|+.........+.........+.+++.+++|+++.+.+++++..
T Consensus 154 y~~sK~a~~~~~~~~~~~~~-~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~ 232 (250)
T PRK08063 154 VGVSKAALEALTRYLAVELA-PKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAVLFLCSPEA 232 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHh-HhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCchh
Confidence 99999999999999999997 78999999999999887643322223344444555677788999999999999999888
Q ss_pred CCccccEEEeCCCCCC
Q 022386 249 KYVNGNTLIVDGGNWL 264 (298)
Q Consensus 249 ~~~~G~~i~~dgG~~~ 264 (298)
.+++|+.+.+|||..+
T Consensus 233 ~~~~g~~~~~~gg~~~ 248 (250)
T PRK08063 233 DMIRGQTIIVDGGRSL 248 (250)
T ss_pred cCccCCEEEECCCeee
Confidence 8999999999999764
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-40 Score=285.55 Aligned_cols=238 Identities=30% Similarity=0.394 Sum_probs=203.6
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
.+|++|+++||||++|||++++++|+++|++|++++++....+ ..++.++.+|++++++++++++.+.+.+
T Consensus 5 ~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (266)
T PRK06171 5 LNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ---------HENYQFVPTDVSSAEEVNHTVAEIIEKF 75 (266)
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc---------cCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3678999999999999999999999999999999998865322 2357789999999999999999999999
Q ss_pred CCccEEEECCCCCCCC---------CCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccc
Q 022386 88 GKLDILVNAAAGNFLV---------PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (298)
Q Consensus 88 ~~id~li~~ag~~~~~---------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~ 158 (298)
+++|++|||||..... +..+.+.++|++++++|+.+++++++++.++|.+++ .|+||++||..
T Consensus 76 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~g~iv~isS~~ 147 (266)
T PRK06171 76 GRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQH--------DGVIVNMSSEA 147 (266)
T ss_pred CCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcC--------CcEEEEEcccc
Confidence 9999999999975332 234578899999999999999999999999998765 58899999999
Q ss_pred cccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccc-CCcccCc----------CChHHHHHHHhh--hc
Q 022386 159 HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK-DTAGVSK----------LAPEEIRSKATD--YM 225 (298)
Q Consensus 159 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~-t~~~~~~----------~~~~~~~~~~~~--~~ 225 (298)
+..+.+....|+++|++++.++++++.|++ ++||+||.|+||+++ |++.... ...++..+.+.. ..
T Consensus 148 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~-~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (266)
T PRK06171 148 GLEGSEGQSCYAATKAALNSFTRSWAKELG-KHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTI 226 (266)
T ss_pred ccCCCCCCchhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccc
Confidence 988888899999999999999999999998 789999999999997 3322111 011233333443 67
Q ss_pred cCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCC
Q 022386 226 AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW 263 (298)
Q Consensus 226 ~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~ 263 (298)
|.+++.+|+|+|+++.||+++.++++||++|.+|||..
T Consensus 227 p~~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdgg~~ 264 (266)
T PRK06171 227 PLGRSGKLSEVADLVCYLLSDRASYITGVTTNIAGGKT 264 (266)
T ss_pred cCCCCCCHHHhhhheeeeeccccccceeeEEEecCccc
Confidence 88999999999999999999999999999999999965
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-39 Score=277.93 Aligned_cols=243 Identities=29% Similarity=0.416 Sum_probs=206.4
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCC-hhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
++|++|+++||||++|||+++++.|+++|++|+++.++ .+..+.....+ +.++.++.||++++++++++++++.+.
T Consensus 1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (253)
T PRK08642 1 MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL---GDRAIALQADVTDREQVQAMFATATEH 77 (253)
T ss_pred CCCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 35678999999999999999999999999999887654 44444443333 356888999999999999999999999
Q ss_pred hCC-ccEEEECCCCCC------CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 87 FGK-LDILVNAAAGNF------LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 87 ~~~-id~li~~ag~~~------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
++. +|++|||||... ..++.+.+.++|++.+++|+.+++++++++++.|.+.+ .|+||+++|..+
T Consensus 78 ~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~g~iv~iss~~~ 149 (253)
T PRK08642 78 FGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQG--------FGRIINIGTNLF 149 (253)
T ss_pred hCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcC--------CeEEEEECCccc
Confidence 887 999999998631 24567788999999999999999999999999997654 588999999877
Q ss_pred ccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHH
Q 022386 160 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239 (298)
Q Consensus 160 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (298)
..+..+...|++||++++.++++++.+++ ++|||||+|+||+++|+..... .+++.........+.+++.+|+|++++
T Consensus 150 ~~~~~~~~~Y~~sK~a~~~l~~~la~~~~-~~~i~v~~i~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~va~~ 227 (253)
T PRK08642 150 QNPVVPYHDYTTAKAALLGLTRNLAAELG-PYGITVNMVSGGLLRTTDASAA-TPDEVFDLIAATTPLRKVTTPQEFADA 227 (253)
T ss_pred cCCCCCccchHHHHHHHHHHHHHHHHHhC-ccCeEEEEEeecccCCchhhcc-CCHHHHHHHHhcCCcCCCCCHHHHHHH
Confidence 76766778999999999999999999998 7899999999999998754332 234444555667788899999999999
Q ss_pred HHHhcCCCCCCccccEEEeCCCCC
Q 022386 240 ALYLASDAGKYVNGNTLIVDGGNW 263 (298)
Q Consensus 240 ~~~L~s~~~~~~~G~~i~~dgG~~ 263 (298)
+.||+++.+.+++|+.|.+|||..
T Consensus 228 ~~~l~~~~~~~~~G~~~~vdgg~~ 251 (253)
T PRK08642 228 VLFFASPWARAVTGQNLVVDGGLV 251 (253)
T ss_pred HHHHcCchhcCccCCEEEeCCCee
Confidence 999999988999999999999953
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-39 Score=277.87 Aligned_cols=252 Identities=31% Similarity=0.431 Sum_probs=220.8
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
|...++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+.+...+.++.++.||++++++++++++++.
T Consensus 3 ~~~~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 82 (263)
T PRK07814 3 LDRFRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAV 82 (263)
T ss_pred cccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 44567899999999999999999999999999999999999888888888887667778899999999999999999999
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~ 164 (298)
+.++++|++|||||.....++.+.+.+++++++++|+.+++.+++++.++|.+... .|+||++||..+..+.+
T Consensus 83 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-------~g~iv~~sS~~~~~~~~ 155 (263)
T PRK07814 83 EAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSG-------GGSVINISSTMGRLAGR 155 (263)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcC-------CeEEEEEccccccCCCC
Confidence 99999999999999766677778889999999999999999999999999987321 58899999999988888
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhc
Q 022386 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (298)
Q Consensus 165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~ 244 (298)
+...|+++|++++.++++++.|+. + +|++++|+||++.|++.......++.........+..++.+++|+++.++|++
T Consensus 156 ~~~~Y~~sK~a~~~~~~~~~~e~~-~-~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~ 233 (263)
T PRK07814 156 GFAAYGTAKAALAHYTRLAALDLC-P-RIRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLA 233 (263)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHC-C-CceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence 899999999999999999999996 5 69999999999998754332223444444555567778899999999999999
Q ss_pred CCCCCCccccEEEeCCCCCCC
Q 022386 245 SDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 245 s~~~~~~~G~~i~~dgG~~~~ 265 (298)
++.+.+++|+.+.+|||....
T Consensus 234 ~~~~~~~~g~~~~~~~~~~~~ 254 (263)
T PRK07814 234 SPAGSYLTGKTLEVDGGLTFP 254 (263)
T ss_pred CccccCcCCCEEEECCCccCC
Confidence 988889999999999997763
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-39 Score=275.78 Aligned_cols=243 Identities=24% Similarity=0.336 Sum_probs=212.7
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEE-cCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
|++|+++||||++|||++++++|+++|++|++. +++....++..+++...+.++..+.||++|.++++++++++.+.++
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG 80 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 568999999999999999999999999998884 4555556666677766677888899999999999999999999999
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchh
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~ 168 (298)
++|++|||||.....++.+.+.++|++.+++|+.+++.+++++++.|.+++ .++||++||..+..+.+....
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~ 152 (246)
T PRK12938 81 EIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERG--------WGRIINISSVNGQKGQFGQTN 152 (246)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--------CeEEEEEechhccCCCCCChh
Confidence 999999999987666777889999999999999999999999999998764 588999999988888888999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCC
Q 022386 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (298)
Q Consensus 169 Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~ 248 (298)
|+++|++++.++++++.|+. +.||+++.|.||+++|+..... .++..+......+..++.+++++++.+.||+++.+
T Consensus 153 y~~sK~a~~~~~~~l~~~~~-~~gi~v~~i~pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~ 229 (246)
T PRK12938 153 YSTAKAGIHGFTMSLAQEVA-TKGVTVNTVSPGYIGTDMVKAI--RPDVLEKIVATIPVRRLGSPDEIGSIVAWLASEES 229 (246)
T ss_pred HHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEecccCCchhhhc--ChHHHHHHHhcCCccCCcCHHHHHHHHHHHcCccc
Confidence 99999999999999999997 7899999999999998864332 23334444455677889999999999999999988
Q ss_pred CCccccEEEeCCCCC
Q 022386 249 KYVNGNTLIVDGGNW 263 (298)
Q Consensus 249 ~~~~G~~i~~dgG~~ 263 (298)
.+++|+.+.+|||..
T Consensus 230 ~~~~g~~~~~~~g~~ 244 (246)
T PRK12938 230 GFSTGADFSLNGGLH 244 (246)
T ss_pred CCccCcEEEECCccc
Confidence 999999999999954
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-39 Score=275.00 Aligned_cols=248 Identities=31% Similarity=0.370 Sum_probs=221.5
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
+..+++|+++||||+++||+++++.|+++|++|++++|+.+++++..+.+.+.+.++.++.+|++++++++++++.+.+.
T Consensus 2 ~~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 81 (250)
T PRK12939 2 ASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAA 81 (250)
T ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 45688999999999999999999999999999999999988888888888777778999999999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
++++|++|||+|.....++.+.+.+++++.+++|+.+++.+++++.++|.+++ .|++|++||..+..+.+..
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~ 153 (250)
T PRK12939 82 LGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSG--------RGRIVNLASDTALWGAPKL 153 (250)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--------CeEEEEECchhhccCCCCc
Confidence 99999999999987777777889999999999999999999999999998765 6899999999988888888
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
..|+++|++++.+++.++.++. +++|+++.|+||+++|+..... .............+.+++.+++|+++++++++++
T Consensus 154 ~~y~~sK~~~~~~~~~l~~~~~-~~~i~v~~v~pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 231 (250)
T PRK12939 154 GAYVASKGAVIGMTRSLARELG-GRGITVNAIAPGLTATEATAYV-PADERHAYYLKGRALERLQVPDDVAGAVLFLLSD 231 (250)
T ss_pred chHHHHHHHHHHHHHHHHHHHh-hhCEEEEEEEECCCCCcccccc-CChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence 9999999999999999999997 7799999999999998865432 2224444555667888899999999999999998
Q ss_pred CCCCccccEEEeCCCCCC
Q 022386 247 AGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 247 ~~~~~~G~~i~~dgG~~~ 264 (298)
..++++|+.|.+|||..+
T Consensus 232 ~~~~~~G~~i~~~gg~~~ 249 (250)
T PRK12939 232 AARFVTGQLLPVNGGFVM 249 (250)
T ss_pred cccCccCcEEEECCCccc
Confidence 888999999999999654
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=279.00 Aligned_cols=246 Identities=28% Similarity=0.416 Sum_probs=216.5
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
.|++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++++++++++++++.+.++
T Consensus 2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (258)
T PRK07890 2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFG 81 (258)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence 46789999999999999999999999999999999998888888888877677889999999999999999999999999
Q ss_pred CccEEEECCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 89 KLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 89 ~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
++|++|||||... ..++.+.+.++|++.+++|+.+++.+++++.+.|.+. .++||++||..+..+.++..
T Consensus 82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---------~~~ii~~sS~~~~~~~~~~~ 152 (258)
T PRK07890 82 RVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES---------GGSIVMINSMVLRHSQPKYG 152 (258)
T ss_pred CccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC---------CCEEEEEechhhccCCCCcc
Confidence 9999999999753 3667778899999999999999999999999999765 36899999999988888899
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc---------CChHHHHHHHhhhccCCCCCCHHHHHH
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK---------LAPEEIRSKATDYMAAYKFGEKWDIAM 238 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~ 238 (298)
.|+++|++++.+++.++.|++ ++||+++.|+||++.|+..... ...++....+....+..++.+++|+++
T Consensus 153 ~Y~~sK~a~~~l~~~~a~~~~-~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 231 (258)
T PRK07890 153 AYKMAKGALLAASQSLATELG-PQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVAS 231 (258)
T ss_pred hhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHHHHH
Confidence 999999999999999999997 7799999999999998754321 122344444455667788999999999
Q ss_pred HHHHhcCCCCCCccccEEEeCCCCCC
Q 022386 239 AALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 239 ~~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
++.||+++.+.+++|+.+.+|||...
T Consensus 232 a~~~l~~~~~~~~~G~~i~~~gg~~~ 257 (258)
T PRK07890 232 AVLFLASDLARAITGQTLDVNCGEYH 257 (258)
T ss_pred HHHHHcCHhhhCccCcEEEeCCcccc
Confidence 99999998778999999999999643
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=307.09 Aligned_cols=242 Identities=29% Similarity=0.423 Sum_probs=212.8
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
.+.||+++||||++|||+++|++|+++|++|++++|+.+.++++.+.+ +.++..+.+|++|+++++++++++.+.++
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 342 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL---GDEHLSVQADITDEAAVESAFAQIQARWG 342 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEccCCCHHHHHHHHHHHHHHcC
Confidence 457999999999999999999999999999999999987777666544 45677889999999999999999999999
Q ss_pred CccEEEECCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 89 KLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 89 ~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
++|++|||||... ..++.+.+.++|++++++|+.++++++++++|+|.+ .|+||++||..+..+.++..
T Consensus 343 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~----------~g~iv~isS~~~~~~~~~~~ 412 (520)
T PRK06484 343 RLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQ----------GGVIVNLGSIASLLALPPRN 412 (520)
T ss_pred CCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhcc----------CCEEEEECchhhcCCCCCCc
Confidence 9999999999763 356778899999999999999999999999999932 58899999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC-hHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
.|++||++++.|+++++.|+. ++|||||+|+||+++|++...... .+...+.+....+.+++.+|+|+|+.++||+++
T Consensus 413 ~Y~asKaal~~l~~~la~e~~-~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~s~ 491 (520)
T PRK06484 413 AYCASKAAVTMLSRSLACEWA-PAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLASP 491 (520)
T ss_pred hhHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 999999999999999999998 789999999999999986543221 122334455667888999999999999999999
Q ss_pred CCCCccccEEEeCCCCCC
Q 022386 247 AGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 247 ~~~~~~G~~i~~dgG~~~ 264 (298)
.+.+++|+.+.+|||...
T Consensus 492 ~~~~~~G~~i~vdgg~~~ 509 (520)
T PRK06484 492 AASYVNGATLTVDGGWTA 509 (520)
T ss_pred cccCccCcEEEECCCccC
Confidence 889999999999999754
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-39 Score=280.81 Aligned_cols=246 Identities=34% Similarity=0.451 Sum_probs=214.7
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh-HHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
...+++|++|||||++|||.+++++|+++|++|++++|+.+ ..+...+.+...+.++.++.||+++.++++++++++.+
T Consensus 41 ~~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~ 120 (290)
T PRK06701 41 SGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVR 120 (290)
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 35788999999999999999999999999999999999853 45555666666677889999999999999999999999
Q ss_pred HhCCccEEEECCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC
Q 022386 86 HFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (298)
Q Consensus 86 ~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~ 164 (298)
.++++|++|||||... ..++.+.+.++|++.+++|+.+++.+++++++.|++ .++||++||..++.+.+
T Consensus 121 ~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~----------~g~iV~isS~~~~~~~~ 190 (290)
T PRK06701 121 ELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ----------GSAIINTGSITGYEGNE 190 (290)
T ss_pred HcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh----------CCeEEEEecccccCCCC
Confidence 9999999999999753 356777889999999999999999999999999954 46799999999988888
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhc
Q 022386 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (298)
Q Consensus 165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~ 244 (298)
....|++||++++.++++++.++. ++||+|++|+||+++|+....... ++....+....+.+++.+++|++++++||+
T Consensus 191 ~~~~Y~~sK~a~~~l~~~la~~~~-~~gIrv~~i~pG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~ll 268 (290)
T PRK06701 191 TLIDYSATKGAIHAFTRSLAQSLV-QKGIRVNAVAPGPIWTPLIPSDFD-EEKVSQFGSNTPMQRPGQPEELAPAYVFLA 268 (290)
T ss_pred CcchhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecCCCCCcccccccC-HHHHHHHHhcCCcCCCcCHHHHHHHHHHHc
Confidence 889999999999999999999997 789999999999999986544322 333344555667888999999999999999
Q ss_pred CCCCCCccccEEEeCCCCCC
Q 022386 245 SDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 245 s~~~~~~~G~~i~~dgG~~~ 264 (298)
++.+.+++|+.|.+|||...
T Consensus 269 ~~~~~~~~G~~i~idgg~~~ 288 (290)
T PRK06701 269 SPDSSYITGQMLHVNGGVIV 288 (290)
T ss_pred CcccCCccCcEEEeCCCccc
Confidence 99889999999999999754
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-39 Score=275.79 Aligned_cols=239 Identities=24% Similarity=0.309 Sum_probs=203.5
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
.+++||+++||||++|||++++++|+++|++|++++|+.+. ....++.+++||++|+++++++++++.+.+
T Consensus 5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~---------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (260)
T PRK06523 5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPD---------DLPEGVEFVAADLTTAEGCAAVARAVLERL 75 (260)
T ss_pred cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhh---------hcCCceeEEecCCCCHHHHHHHHHHHHHHc
Confidence 35889999999999999999999999999999999998542 123457889999999999999999999999
Q ss_pred CCccEEEECCCCCC--CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC-
Q 022386 88 GKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW- 164 (298)
Q Consensus 88 ~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~- 164 (298)
+++|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|+|+++. .|+||++||..+..+.+
T Consensus 76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--------~g~ii~isS~~~~~~~~~ 147 (260)
T PRK06523 76 GGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG--------SGVIIHVTSIQRRLPLPE 147 (260)
T ss_pred CCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC--------CcEEEEEecccccCCCCC
Confidence 99999999999642 35567788999999999999999999999999998764 58899999998887755
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC---------ChHHHHHHH---hhhccCCCCCC
Q 022386 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---------APEEIRSKA---TDYMAAYKFGE 232 (298)
Q Consensus 165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~---------~~~~~~~~~---~~~~~~~~~~~ 232 (298)
....|+++|++++.+++.++.|++ ++||++|.|+||+++|++..... ..++....+ ....|.+++.+
T Consensus 148 ~~~~Y~~sK~a~~~l~~~~a~~~~-~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 226 (260)
T PRK06523 148 STTAYAAAKAALSTYSKSLSKEVA-PKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAE 226 (260)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCC
Confidence 688999999999999999999997 78999999999999998642210 112221111 23467888999
Q ss_pred HHHHHHHHHHhcCCCCCCccccEEEeCCCCCC
Q 022386 233 KWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 233 ~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
|+|+++.+.||+++.+++++|+.+.+|||...
T Consensus 227 ~~~va~~~~~l~s~~~~~~~G~~~~vdgg~~~ 258 (260)
T PRK06523 227 PEEVAELIAFLASDRAASITGTEYVIDGGTVP 258 (260)
T ss_pred HHHHHHHHHHHhCcccccccCceEEecCCccC
Confidence 99999999999999889999999999999654
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-39 Score=271.95 Aligned_cols=234 Identities=23% Similarity=0.289 Sum_probs=199.2
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
+|+++||||++|||++++++|+++|++|++++|+.+.. .+.+.+.+ +.++.+|++++++++++++.+.+.++++|
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~---~~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~~~id 76 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPA---IDGLRQAG--AQCIQADFSTNAGIMAFIDELKQHTDGLR 76 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhH---HHHHHHcC--CEEEEcCCCCHHHHHHHHHHHHhhCCCcc
Confidence 68999999999999999999999999999999986543 23343333 67889999999999999999999999999
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHH
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~ 171 (298)
++|||||........+.+.++|++.+++|+.+++.+++.++|.|.+... ..|+||+++|..+..+.+....|++
T Consensus 77 ~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~------~~g~iv~~ss~~~~~~~~~~~~Y~a 150 (236)
T PRK06483 77 AIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGH------AASDIIHITDYVVEKGSDKHIAYAA 150 (236)
T ss_pred EEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCC------CCceEEEEcchhhccCCCCCccHHH
Confidence 9999999765555567788999999999999999999999999986531 1478999999988888888899999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCCCCc
Q 022386 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYV 251 (298)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~ 251 (298)
||++++.|+++++.|++ + +||||+|+||++.++.. ..++.........+.+++..|+|+++.+.||++ +.++
T Consensus 151 sKaal~~l~~~~a~e~~-~-~irvn~v~Pg~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--~~~~ 222 (236)
T PRK06483 151 SKAALDNMTLSFAAKLA-P-EVKVNSIAPALILFNEG----DDAAYRQKALAKSLLKIEPGEEEIIDLVDYLLT--SCYV 222 (236)
T ss_pred HHHHHHHHHHHHHHHHC-C-CcEEEEEccCceecCCC----CCHHHHHHHhccCccccCCCHHHHHHHHHHHhc--CCCc
Confidence 99999999999999997 5 59999999999976532 123333344455678889999999999999997 5799
Q ss_pred cccEEEeCCCCCC
Q 022386 252 NGNTLIVDGGNWL 264 (298)
Q Consensus 252 ~G~~i~~dgG~~~ 264 (298)
||+.|.+|||..+
T Consensus 223 ~G~~i~vdgg~~~ 235 (236)
T PRK06483 223 TGRSLPVDGGRHL 235 (236)
T ss_pred CCcEEEeCccccc
Confidence 9999999999765
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-39 Score=274.69 Aligned_cols=241 Identities=23% Similarity=0.345 Sum_probs=210.7
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
..++|++|+++|||++++||++++++|+++|++|++++|+. +...+.++.++++|++++++++++++++.+
T Consensus 2 ~~~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 72 (252)
T PRK08220 2 NAMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQEDYPFATFVLDVSDAAAVAQVCQRLLA 72 (252)
T ss_pred CccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 34678999999999999999999999999999999999985 223355688999999999999999999999
Q ss_pred HhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC
Q 022386 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~ 165 (298)
.++++|++|||+|.....++.+.+.+++++.+++|+.+++.+++++.+.|+++. .|+||++||..+..+.+.
T Consensus 73 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~g~iv~~ss~~~~~~~~~ 144 (252)
T PRK08220 73 ETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQR--------SGAIVTVGSNAAHVPRIG 144 (252)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC--------CCEEEEECCchhccCCCC
Confidence 999999999999987777788889999999999999999999999999998765 588999999988888888
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHH--------HHHHHhhhccCCCCCCHHHHH
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE--------IRSKATDYMAAYKFGEKWDIA 237 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~dva 237 (298)
...|+++|++++.+++.++.|+. ++||+||.|.||+++|++.......+. ..+.+....+.+++.+|+|+|
T Consensus 145 ~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva 223 (252)
T PRK08220 145 MAAYGASKAALTSLAKCVGLELA-PYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIA 223 (252)
T ss_pred CchhHHHHHHHHHHHHHHHHHhh-HhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHH
Confidence 89999999999999999999997 789999999999999886433211111 123344556788899999999
Q ss_pred HHHHHhcCCCCCCccccEEEeCCCCCC
Q 022386 238 MAALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 238 ~~~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
+++.||+++...+++|+.+.+|||..+
T Consensus 224 ~~~~~l~~~~~~~~~g~~i~~~gg~~~ 250 (252)
T PRK08220 224 NAVLFLASDLASHITLQDIVVDGGATL 250 (252)
T ss_pred HHHHHHhcchhcCccCcEEEECCCeec
Confidence 999999999889999999999999766
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-39 Score=273.28 Aligned_cols=242 Identities=29% Similarity=0.398 Sum_probs=208.7
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
+.|++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++ +.++.+++||+++.+++.++++.+.+.+
T Consensus 2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (249)
T PRK06500 2 SRLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL---GESALVIRADAGDVAAQKALAQALAEAF 78 (249)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 3578999999999999999999999999999999999876655554443 5678889999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
+++|++|||||.....++.+.+.++|++.+++|+.+++.+++++.|+|.+ .+++|+++|..+..+.+...
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~----------~~~~i~~~S~~~~~~~~~~~ 148 (249)
T PRK06500 79 GRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN----------PASIVLNGSINAHIGMPNSS 148 (249)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc----------CCEEEEEechHhccCCCCcc
Confidence 99999999999876677778899999999999999999999999999864 36799999988888888899
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC----ChHHHHHHHhhhccCCCCCCHHHHHHHHHHh
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL----APEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L 243 (298)
.|+.+|++++.++++++.|+. ++||+++.|+||+++|++..... ..+.....+....+..++.+|+|+++++.||
T Consensus 149 ~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l 227 (249)
T PRK06500 149 VYAASKAALLSLAKTLSGELL-PRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYL 227 (249)
T ss_pred HHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 999999999999999999997 77999999999999988543211 1122333444556778889999999999999
Q ss_pred cCCCCCCccccEEEeCCCCC
Q 022386 244 ASDAGKYVNGNTLIVDGGNW 263 (298)
Q Consensus 244 ~s~~~~~~~G~~i~~dgG~~ 263 (298)
+++.+.+++|+.|.+|||.+
T Consensus 228 ~~~~~~~~~g~~i~~~gg~~ 247 (249)
T PRK06500 228 ASDESAFIVGSEIIVDGGMS 247 (249)
T ss_pred cCccccCccCCeEEECCCcc
Confidence 99888999999999999953
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=274.09 Aligned_cols=241 Identities=24% Similarity=0.326 Sum_probs=208.9
Q ss_pred CCCCcEEEEecCCc--hhHHHHHHHHHHcCCcEEEEcCC-----------hhHHHHHHHHHHhCCCCeEEEEccCCCHHH
Q 022386 9 ILKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRR-----------KTVLRSAVAALHSLGIPAIGLEGDVRKRED 75 (298)
Q Consensus 9 ~l~gk~~lVtG~t~--giG~~ia~~l~~~G~~Vv~~~r~-----------~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 75 (298)
.|++|+++||||++ |||.+++++|+++|++|++++|+ ........+++...+.++.++.||++++++
T Consensus 2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 81 (256)
T PRK12748 2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYA 81 (256)
T ss_pred CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence 56899999999994 99999999999999999999987 222222445565566779999999999999
Q ss_pred HHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEec
Q 022386 76 AVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS 155 (298)
Q Consensus 76 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vs 155 (298)
++++++++.+.++++|++|||||+....++.+.+.+++++.+++|+.+++++++++.+.|.++. .++||++|
T Consensus 82 ~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~~iv~~s 153 (256)
T PRK12748 82 PNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKA--------GGRIINLT 153 (256)
T ss_pred HHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcC--------CeEEEEEC
Confidence 9999999999999999999999987777888889999999999999999999999999997654 58899999
Q ss_pred ccccccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHH
Q 022386 156 ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 235 (298)
Q Consensus 156 s~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 235 (298)
|..+..+.++...|+++|++++.++++++.|+. ++||+|++|+||+++|+... +..........+..++.+|+|
T Consensus 154 s~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~i~Pg~~~t~~~~-----~~~~~~~~~~~~~~~~~~~~~ 227 (256)
T PRK12748 154 SGQSLGPMPDELAYAATKGAIEAFTKSLAPELA-EKGITVNAVNPGPTDTGWIT-----EELKHHLVPKFPQGRVGEPVD 227 (256)
T ss_pred CccccCCCCCchHHHHHHHHHHHHHHHHHHHHH-HhCeEEEEEEeCcccCCCCC-----hhHHHhhhccCCCCCCcCHHH
Confidence 998888888889999999999999999999997 77999999999999887432 222333344556677889999
Q ss_pred HHHHHHHhcCCCCCCccccEEEeCCCCC
Q 022386 236 IAMAALYLASDAGKYVNGNTLIVDGGNW 263 (298)
Q Consensus 236 va~~~~~L~s~~~~~~~G~~i~~dgG~~ 263 (298)
+++.+.||+++.+.+++|+.+.+|||+.
T Consensus 228 ~a~~~~~l~~~~~~~~~g~~~~~d~g~~ 255 (256)
T PRK12748 228 AARLIAFLVSEEAKWITGQVIHSEGGFS 255 (256)
T ss_pred HHHHHHHHhCcccccccCCEEEecCCcc
Confidence 9999999999988899999999999964
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-39 Score=275.63 Aligned_cols=246 Identities=30% Similarity=0.345 Sum_probs=210.4
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
.+|+||+++||||++|||++++++|+++|++|++++|+.+.. +..+++.+.+.++.++.+|++++++++++++++.+.+
T Consensus 3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK08628 3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF 81 (258)
T ss_pred CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence 468999999999999999999999999999999999987766 6667777777789999999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
+++|++|||||......+.+.+ ++|++.+++|+.+++.+++.+.|.|++. .++||++||..+..+.+.+.
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~---------~~~iv~~ss~~~~~~~~~~~ 151 (258)
T PRK08628 82 GRIDGLVNNAGVNDGVGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKAS---------RGAIVNISSKTALTGQGGTS 151 (258)
T ss_pred CCCCEEEECCcccCCCcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhcc---------CcEEEEECCHHhccCCCCCc
Confidence 9999999999976555555544 9999999999999999999999998754 47899999999988888899
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC---C-hHHHHHHHhhhccC-CCCCCHHHHHHHHHH
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---A-PEEIRSKATDYMAA-YKFGEKWDIAMAALY 242 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~---~-~~~~~~~~~~~~~~-~~~~~~~dva~~~~~ 242 (298)
.|++||++++.+++.++.|+. ++||+++.|+||.++|+...... . .+..........+. .++.+|+|+++.++|
T Consensus 152 ~Y~~sK~a~~~~~~~l~~e~~-~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 230 (258)
T PRK08628 152 GYAAAKGAQLALTREWAVALA-KDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVF 230 (258)
T ss_pred hhHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHHH
Confidence 999999999999999999997 78999999999999987543211 1 12222223333454 378999999999999
Q ss_pred hcCCCCCCccccEEEeCCCCCCC
Q 022386 243 LASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 243 L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
++++.+.+++|+.+.+|||.+..
T Consensus 231 l~~~~~~~~~g~~~~~~gg~~~~ 253 (258)
T PRK08628 231 LLSERSSHTTGQWLFVDGGYVHL 253 (258)
T ss_pred HhChhhccccCceEEecCCcccc
Confidence 99998899999999999997664
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-38 Score=274.98 Aligned_cols=245 Identities=23% Similarity=0.320 Sum_probs=212.4
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCC--CCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
+|+++||||+++||.+++++|+++|++|++++|+...+++..+.+.... .++.++.||+++.++++++++++.+.+++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 7899999999999999999999999999999999887777777776542 46889999999999999999999999999
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhh
Q 022386 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 169 (298)
Q Consensus 90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y 169 (298)
+|++|||||.....++.+.+.++|++.+++|+.+++++++++++.|.+++. .++||++||..+..+.+....|
T Consensus 82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-------~~~iv~~ss~~~~~~~~~~~~Y 154 (259)
T PRK12384 82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGI-------QGRIIQINSKSGKVGSKHNSGY 154 (259)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCC-------CcEEEEecCcccccCCCCCchh
Confidence 999999999877777888899999999999999999999999999986531 3789999998887787788899
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcc-cCCcccCcC---------ChHHHHHHHhhhccCCCCCCHHHHHHH
Q 022386 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI-KDTAGVSKL---------APEEIRSKATDYMAAYKFGEKWDIAMA 239 (298)
Q Consensus 170 ~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v-~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (298)
++||+|++.++++++.|++ ++||+|+.|.||.+ .++...... ..++..+...+..+.+++.+++|++++
T Consensus 155 ~~sKaa~~~l~~~la~e~~-~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~ 233 (259)
T PRK12384 155 SAAKFGGVGLTQSLALDLA-EYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNM 233 (259)
T ss_pred HHHHHHHHHHHHHHHHHHH-HcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHH
Confidence 9999999999999999997 78999999999976 443322111 123444455567788999999999999
Q ss_pred HHHhcCCCCCCccccEEEeCCCCCC
Q 022386 240 ALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 240 ~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
++||+++.+.+++|+.+++|||..+
T Consensus 234 ~~~l~~~~~~~~~G~~~~v~~g~~~ 258 (259)
T PRK12384 234 LLFYASPKASYCTGQSINVTGGQVM 258 (259)
T ss_pred HHHHcCcccccccCceEEEcCCEEe
Confidence 9999998888999999999999753
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=272.56 Aligned_cols=245 Identities=26% Similarity=0.400 Sum_probs=218.6
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
|++|++|||||+++||++++++|+++|++|++++|+.+..+++.+.+.+.+.++.++.+|+++.++++++++++.+.+++
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 80 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP 80 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 57899999999999999999999999999999999988888887877776778999999999999999999999999999
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhh
Q 022386 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 169 (298)
Q Consensus 90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y 169 (298)
+|++|||+|.....++.+.+.++|++.+++|+.+++++++.+.+.|++.+ .++||++||..+..+.+....|
T Consensus 81 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~~ii~iss~~~~~~~~~~~~Y 152 (250)
T TIGR03206 81 VDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERG--------AGRIVNIASDAARVGSSGEAVY 152 (250)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--------CeEEEEECchhhccCCCCCchH
Confidence 99999999987667777788899999999999999999999999998765 5789999999998888889999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC----ChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcC
Q 022386 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL----APEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (298)
Q Consensus 170 ~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s 245 (298)
+.+|+++..++++++.++. +.||+++.++||+++|++..... .+......+....+.+++.+++|+|+++.+|++
T Consensus 153 ~~sK~a~~~~~~~la~~~~-~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~ 231 (250)
T TIGR03206 153 AACKGGLVAFSKTMAREHA-RHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSS 231 (250)
T ss_pred HHHHHHHHHHHHHHHHHHh-HhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHHHHHHHHHHHcC
Confidence 9999999999999999987 67999999999999988543321 223344556667788889999999999999999
Q ss_pred CCCCCccccEEEeCCCCC
Q 022386 246 DAGKYVNGNTLIVDGGNW 263 (298)
Q Consensus 246 ~~~~~~~G~~i~~dgG~~ 263 (298)
++..+++|+++.+|||..
T Consensus 232 ~~~~~~~g~~~~~~~g~~ 249 (250)
T TIGR03206 232 DDASFITGQVLSVSGGLT 249 (250)
T ss_pred cccCCCcCcEEEeCCCcc
Confidence 999999999999999965
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-38 Score=279.18 Aligned_cols=249 Identities=25% Similarity=0.347 Sum_probs=207.4
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh-hHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
+..+|+||+++||||++|||++++++|+++|++|++++++. +..++..+++...+.++.++.||+++.++++++++.+.
T Consensus 6 ~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~ 85 (306)
T PRK07792 6 NTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAV 85 (306)
T ss_pred CCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 34678999999999999999999999999999999998753 45667777787777889999999999999999999999
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~ 164 (298)
+ ++++|++|||||+.....+.+.+.++|+..+++|+.+++++++++.++|+++.... .....|+||+++|..+..+.+
T Consensus 86 ~-~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~-~~~~~g~iv~isS~~~~~~~~ 163 (306)
T PRK07792 86 G-LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAA-GGPVYGRIVNTSSEAGLVGPV 163 (306)
T ss_pred H-hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccc-CCCCCcEEEEECCcccccCCC
Confidence 8 99999999999987777778889999999999999999999999999997542110 011247999999999988888
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCCh-HHHHHHHhhhccCCCCCCHHHHHHHHHHh
Q 022386 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (298)
Q Consensus 165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~L 243 (298)
....|+++|++++.|++.++.|+. ++||+||+|+||. .|++....... ++.. . ......+|++++..+.||
T Consensus 164 ~~~~Y~asKaal~~l~~~la~e~~-~~gI~vn~i~Pg~-~t~~~~~~~~~~~~~~---~---~~~~~~~pe~va~~v~~L 235 (306)
T PRK07792 164 GQANYGAAKAGITALTLSAARALG-RYGVRANAICPRA-RTAMTADVFGDAPDVE---A---GGIDPLSPEHVVPLVQFL 235 (306)
T ss_pred CCchHHHHHHHHHHHHHHHHHHhh-hcCeEEEEECCCC-CCchhhhhccccchhh---h---hccCCCCHHHHHHHHHHH
Confidence 889999999999999999999997 7899999999995 66653221111 1110 0 112235899999999999
Q ss_pred cCCCCCCccccEEEeCCCCCC
Q 022386 244 ASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 244 ~s~~~~~~~G~~i~~dgG~~~ 264 (298)
+++.+.+++|+.+.+|||...
T Consensus 236 ~s~~~~~~tG~~~~v~gg~~~ 256 (306)
T PRK07792 236 ASPAAAEVNGQVFIVYGPMVT 256 (306)
T ss_pred cCccccCCCCCEEEEcCCeEE
Confidence 999888999999999999754
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-39 Score=275.71 Aligned_cols=247 Identities=24% Similarity=0.396 Sum_probs=200.6
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCC----hhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR----KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVV 80 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~ 80 (298)
|++++|++|+++||||++|||+++|++|+++|++|+++.++ .+..++..+++...+.++.++++|+++++++++++
T Consensus 1 ~~~~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~ 80 (257)
T PRK12744 1 MADHSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLF 80 (257)
T ss_pred CCCCCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHH
Confidence 55677899999999999999999999999999997776543 23455555666666677889999999999999999
Q ss_pred HHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEe-ccccc
Q 022386 81 ESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI-SATLH 159 (298)
Q Consensus 81 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~v-ss~~~ 159 (298)
+++.+.++++|++|||||+....++.+.+.++|++.+++|+.+++++++++.|.|.+ .++++++ +|..+
T Consensus 81 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~----------~~~iv~~~ss~~~ 150 (257)
T PRK12744 81 DDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND----------NGKIVTLVTSLLG 150 (257)
T ss_pred HHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc----------CCCEEEEecchhc
Confidence 999999999999999999876677788899999999999999999999999999864 3567776 44433
Q ss_pred ccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHH--HHHhhhccC--CCCCCHHH
Q 022386 160 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR--SKATDYMAA--YKFGEKWD 235 (298)
Q Consensus 160 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~d 235 (298)
.+.+.+..|++||+|++.++++++.|+. ++||+|+.++||++.|+........+... .......+. .++.+|+|
T Consensus 151 -~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 228 (257)
T PRK12744 151 -AFTPFYSAYAGSKAPVEHFTRAASKEFG-ARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIED 228 (257)
T ss_pred -ccCCCcccchhhHHHHHHHHHHHHHHhC-cCceEEEEEecCccccchhccccccchhhcccccccccccccCCCCCHHH
Confidence 3456778999999999999999999998 78999999999999987643322211100 011112233 27889999
Q ss_pred HHHHHHHhcCCCCCCccccEEEeCCCCCC
Q 022386 236 IAMAALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 236 va~~~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
+++.+.||+++ +.+++|+.+.+|||..+
T Consensus 229 va~~~~~l~~~-~~~~~g~~~~~~gg~~~ 256 (257)
T PRK12744 229 IVPFIRFLVTD-GWWITGQTILINGGYTT 256 (257)
T ss_pred HHHHHHHhhcc-cceeecceEeecCCccC
Confidence 99999999996 67899999999999654
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-38 Score=272.22 Aligned_cols=249 Identities=35% Similarity=0.509 Sum_probs=216.4
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
....++++|+++||||+++||.+++++|+++|++|++++|+.++++...+.+...+.++.++.||++|+++++++++++.
T Consensus 5 ~~~~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~ 84 (259)
T PRK08213 5 LELFDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETL 84 (259)
T ss_pred hhhhCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 34567889999999999999999999999999999999999888888888887777788899999999999999999999
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHH-HHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY-LKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
+.++++|++|||||.....+..+.+.+.|++.+++|+.+++.+++++.++ |.+++ .+++|++||..+..+.
T Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~--------~~~~v~~sS~~~~~~~ 156 (259)
T PRK08213 85 ERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRG--------YGRIINVASVAGLGGN 156 (259)
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcC--------CeEEEEECChhhccCC
Confidence 99999999999999766666777889999999999999999999999998 66543 5789999998776655
Q ss_pred CC----chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHH
Q 022386 164 WY----QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239 (298)
Q Consensus 164 ~~----~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (298)
+. ...|+++|++++.++++++.++. ++||+++.++||+++|+..... . +...+......+..++.+++|+++.
T Consensus 157 ~~~~~~~~~Y~~sKa~~~~~~~~~a~~~~-~~gi~v~~v~Pg~~~t~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~va~~ 233 (259)
T PRK08213 157 PPEVMDTIAYNTSKGAVINFTRALAAEWG-PHGIRVNAIAPGFFPTKMTRGT-L-ERLGEDLLAHTPLGRLGDDEDLKGA 233 (259)
T ss_pred CccccCcchHHHHHHHHHHHHHHHHHHhc-ccCEEEEEEecCcCCCcchhhh-h-HHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 43 48899999999999999999997 7899999999999998754322 1 2333445566778889999999999
Q ss_pred HHHhcCCCCCCccccEEEeCCCCCC
Q 022386 240 ALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 240 ~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
+.+|+++.+.+++|+.+.+|||.++
T Consensus 234 ~~~l~~~~~~~~~G~~~~~~~~~~~ 258 (259)
T PRK08213 234 ALLLASDASKHITGQILAVDGGVSA 258 (259)
T ss_pred HHHHhCccccCccCCEEEECCCeec
Confidence 9999999999999999999999653
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-38 Score=270.76 Aligned_cols=243 Identities=30% Similarity=0.407 Sum_probs=214.8
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh-HHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
+++++|+++||||++|||+++++.|+++|++|+++.++.+ ..++..+.+.+.+.++.++.+|+++.++++++++++.+.
T Consensus 1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (245)
T PRK12937 1 MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETA 80 (245)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 3678999999999999999999999999999988877643 456666777777778999999999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
++++|++|||||.....++.+.+.++|++++++|+.+++.+++++++.|.+ .++||++||..+..+.+..
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~----------~~~iv~~ss~~~~~~~~~~ 150 (245)
T PRK12937 81 FGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ----------GGRIINLSTSVIALPLPGY 150 (245)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc----------CcEEEEEeeccccCCCCCC
Confidence 999999999999876677778889999999999999999999999999864 4789999999988888889
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
..|+.+|++++.++++++.|+. +.||+++.|+||+++|++...... ++....+....+..++.+++|+++.+.||+++
T Consensus 151 ~~Y~~sK~a~~~~~~~~a~~~~-~~~i~v~~i~pg~~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~ 228 (245)
T PRK12937 151 GPYAASKAAVEGLVHVLANELR-GRGITVNAVAPGPVATELFFNGKS-AEQIDQLAGLAPLERLGTPEEIAAAVAFLAGP 228 (245)
T ss_pred chhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEeCCccCchhcccCC-HHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCc
Confidence 9999999999999999999997 779999999999999886433322 34455666777888999999999999999998
Q ss_pred CCCCccccEEEeCCCC
Q 022386 247 AGKYVNGNTLIVDGGN 262 (298)
Q Consensus 247 ~~~~~~G~~i~~dgG~ 262 (298)
.+.+++|+.+++|||.
T Consensus 229 ~~~~~~g~~~~~~~g~ 244 (245)
T PRK12937 229 DGAWVNGQVLRVNGGF 244 (245)
T ss_pred cccCccccEEEeCCCC
Confidence 8889999999999984
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=272.72 Aligned_cols=242 Identities=26% Similarity=0.352 Sum_probs=206.8
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
..++||+++||||++|||+++|+.|+++|++|++++++.+..++..+.+ +.++.++++|+++.++++++++++.+.+
T Consensus 6 ~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 82 (255)
T PRK05717 6 PGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL---GENAWFIAMDVADEAQVAAGVAEVLGQF 82 (255)
T ss_pred cccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4678999999999999999999999999999999999876555544333 4568899999999999999999999999
Q ss_pred CCccEEEECCCCCCC--CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC
Q 022386 88 GKLDILVNAAAGNFL--VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (298)
Q Consensus 88 ~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~ 165 (298)
+++|++|||||.... .++.+.+.++|++.+++|+.+++.+++++.|+|.+. .|+||++||..+..+.+.
T Consensus 83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---------~g~ii~~sS~~~~~~~~~ 153 (255)
T PRK05717 83 GRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH---------NGAIVNLASTRARQSEPD 153 (255)
T ss_pred CCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc---------CcEEEEEcchhhcCCCCC
Confidence 999999999997543 466678899999999999999999999999999764 478999999999888888
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcC
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s 245 (298)
...|+++|++++.+++.++.+++ + +|+|++|.||+++|++..... .+..........+.+++.+|+|++..+.+|++
T Consensus 154 ~~~Y~~sKaa~~~~~~~la~~~~-~-~i~v~~i~Pg~i~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~ 230 (255)
T PRK05717 154 TEAYAASKGGLLALTHALAISLG-P-EIRVNAVSPGWIDARDPSQRR-AEPLSEADHAQHPAGRVGTVEDVAAMVAWLLS 230 (255)
T ss_pred CcchHHHHHHHHHHHHHHHHHhc-C-CCEEEEEecccCcCCcccccc-chHHHHHHhhcCCCCCCcCHHHHHHHHHHHcC
Confidence 89999999999999999999986 5 599999999999987543221 12222223335577889999999999999999
Q ss_pred CCCCCccccEEEeCCCCCC
Q 022386 246 DAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 246 ~~~~~~~G~~i~~dgG~~~ 264 (298)
+.+.+++|+.+.+|||...
T Consensus 231 ~~~~~~~g~~~~~~gg~~~ 249 (255)
T PRK05717 231 RQAGFVTGQEFVVDGGMTR 249 (255)
T ss_pred chhcCccCcEEEECCCceE
Confidence 8888999999999999653
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-39 Score=280.61 Aligned_cols=240 Identities=21% Similarity=0.224 Sum_probs=207.9
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
|.+.+++||+++||||++|||+++++.|+++|++|++++|+.++++++.+++.. +.++..+.||++|+++++++++++.
T Consensus 2 ~~~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~ 80 (296)
T PRK05872 2 PPMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG-DDRVLTVVADVTDLAAMQAAAEEAV 80 (296)
T ss_pred CCCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC-CCcEEEEEecCCCHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999999998888877777643 4557777899999999999999999
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~ 164 (298)
+.++++|++|||||+....++.+.+.++|++++++|+.+++++++.++|+|.+. .|+||++||..+..+.+
T Consensus 81 ~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~---------~g~iv~isS~~~~~~~~ 151 (296)
T PRK05872 81 ERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER---------RGYVLQVSSLAAFAAAP 151 (296)
T ss_pred HHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---------CCEEEEEeCHhhcCCCC
Confidence 999999999999998777888889999999999999999999999999999764 48899999999999988
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhh--ccCCCCCCHHHHHHHHHH
Q 022386 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY--MAAYKFGEKWDIAMAALY 242 (298)
Q Consensus 165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~dva~~~~~ 242 (298)
....|++||++++.++++++.|+. ++||+|++++||+++|++........+....+... .+.++..+++|+++.+.+
T Consensus 152 ~~~~Y~asKaal~~~~~~l~~e~~-~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~i~~ 230 (296)
T PRK05872 152 GMAAYCASKAGVEAFANALRLEVA-HHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAAAFVD 230 (296)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHH-HHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHHHHHH
Confidence 999999999999999999999998 78999999999999998754433222222223322 256788999999999999
Q ss_pred hcCCCCCCccccE
Q 022386 243 LASDAGKYVNGNT 255 (298)
Q Consensus 243 L~s~~~~~~~G~~ 255 (298)
++++...++++..
T Consensus 231 ~~~~~~~~i~~~~ 243 (296)
T PRK05872 231 GIERRARRVYAPR 243 (296)
T ss_pred HHhcCCCEEEchH
Confidence 9998777777653
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-38 Score=270.96 Aligned_cols=243 Identities=27% Similarity=0.376 Sum_probs=215.2
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
|+++|||++++||++++++|+++|++|++++|+.+.+++...++...+.++.++.+|++++++++++++.+.+.++++|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 68999999999999999999999999999999988888888888777778999999999999999999999999999999
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHHH
Q 022386 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 172 (298)
Q Consensus 93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~s 172 (298)
+|||+|.....++.+.+.++|++.+++|+.+++++++.+++.|++.+. .+++|++||..+..+.+....|+.|
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~Y~~s 153 (254)
T TIGR02415 81 MVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGH-------GGKIINAASIAGHEGNPILSAYSST 153 (254)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCC-------CeEEEEecchhhcCCCCCCcchHHH
Confidence 999999877778888899999999999999999999999999987542 4789999999998888889999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC---------hHHHHHHHhhhccCCCCCCHHHHHHHHHHh
Q 022386 173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---------PEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (298)
Q Consensus 173 K~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~dva~~~~~L 243 (298)
|++++.+++.++.|+. +.||+|+.|+||+++|++...... ..+..+.+....+.+++.+|+|+++++.||
T Consensus 154 K~a~~~~~~~l~~~~~-~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l 232 (254)
T TIGR02415 154 KFAVRGLTQTAAQELA-PKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFL 232 (254)
T ss_pred HHHHHHHHHHHHHHhc-ccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHHHHHHhh
Confidence 9999999999999997 779999999999999886432111 112233344567788899999999999999
Q ss_pred cCCCCCCccccEEEeCCCCC
Q 022386 244 ASDAGKYVNGNTLIVDGGNW 263 (298)
Q Consensus 244 ~s~~~~~~~G~~i~~dgG~~ 263 (298)
+++.+.+++|+++.+|||..
T Consensus 233 ~~~~~~~~~g~~~~~d~g~~ 252 (254)
T TIGR02415 233 ASEDSDYITGQSILVDGGMV 252 (254)
T ss_pred cccccCCccCcEEEecCCcc
Confidence 99999999999999999954
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-38 Score=269.24 Aligned_cols=246 Identities=31% Similarity=0.455 Sum_probs=216.1
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
++++++++||||+++||.+++++|+++|++|++++|+.+..++..+.+.+ +.++.++.||++++++++++++++.+.++
T Consensus 2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (251)
T PRK07231 2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA-GGRAIAVAADVSDEADVEAAVAAALERFG 80 (251)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 47899999999999999999999999999999999998887777777655 56688999999999999999999999999
Q ss_pred CccEEEECCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 89 KLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 89 ~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
++|++|||+|... ..++.+.+.+++++.+++|+.+++.+++.++++|.+++ .++||++||..+..+.+...
T Consensus 81 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~ 152 (251)
T PRK07231 81 SVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEG--------GGAIVNVASTAGLRPRPGLG 152 (251)
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC--------CcEEEEEcChhhcCCCCCch
Confidence 9999999999753 45566788999999999999999999999999998765 58899999999998888899
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC--hHHHHHHHhhhccCCCCCCHHHHHHHHHHhcC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s 245 (298)
.|+.+|++++.+++.++.+++ +.||+++.++||+++|++...... .++....+....+.+++.+++|++.++.+|++
T Consensus 153 ~y~~sk~~~~~~~~~~a~~~~-~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~ 231 (251)
T PRK07231 153 WYNASKGAVITLTKALAAELG-PDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFLAS 231 (251)
T ss_pred HHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHhC
Confidence 999999999999999999997 779999999999999876443221 12334445566678889999999999999999
Q ss_pred CCCCCccccEEEeCCCCCC
Q 022386 246 DAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 246 ~~~~~~~G~~i~~dgG~~~ 264 (298)
+...+++|+.+.+|||..+
T Consensus 232 ~~~~~~~g~~~~~~gg~~~ 250 (251)
T PRK07231 232 DEASWITGVTLVVDGGRCV 250 (251)
T ss_pred ccccCCCCCeEEECCCccC
Confidence 8888999999999999754
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-39 Score=268.66 Aligned_cols=220 Identities=21% Similarity=0.236 Sum_probs=199.4
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
...+.+|++||||||++|||+++|.+|+++|+.+++.+.+.+..+++.+++++.| +++.+.||+++.+++.+..+++.+
T Consensus 32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~eei~~~a~~Vk~ 110 (300)
T KOG1201|consen 32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDREEIYRLAKKVKK 110 (300)
T ss_pred chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCCHHHHHHHHHHHHH
Confidence 4568899999999999999999999999999999999999999999999998875 899999999999999999999999
Q ss_pred HhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC
Q 022386 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~ 165 (298)
+.|.+|++|||||+....++.+.+.+++++.|++|+.|++.++++|+|.|.+++ .|+||+|+|.+|..+.++
T Consensus 111 e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~--------~GHIV~IaS~aG~~g~~g 182 (300)
T KOG1201|consen 111 EVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN--------NGHIVTIASVAGLFGPAG 182 (300)
T ss_pred hcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC--------CceEEEehhhhcccCCcc
Confidence 999999999999999999999999999999999999999999999999999987 799999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhc--CCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHh
Q 022386 166 QIHVSAAKAAVDSITRSLALEWG--TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~--~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L 243 (298)
...|++||+|+.++++++..|+. ...||+...++|++++|.+.....+. ..+....+|+.+|+.++.-
T Consensus 183 l~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~~~~~----------~~l~P~L~p~~va~~Iv~a 252 (300)
T KOG1201|consen 183 LADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDGATPF----------PTLAPLLEPEYVAKRIVEA 252 (300)
T ss_pred chhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCCCCCC----------ccccCCCCHHHHHHHHHHH
Confidence 99999999999999999999985 35579999999999998876542111 1233456888998888765
Q ss_pred c
Q 022386 244 A 244 (298)
Q Consensus 244 ~ 244 (298)
.
T Consensus 253 i 253 (300)
T KOG1201|consen 253 I 253 (300)
T ss_pred H
Confidence 5
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-38 Score=268.70 Aligned_cols=236 Identities=28% Similarity=0.317 Sum_probs=206.6
Q ss_pred EEEecCCchhHHHHHHHHHHcCCcEEEEcCC-hhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 022386 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (298)
Q Consensus 15 ~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l 93 (298)
++||||++|||+++++.|+++|++|++++++ .+..+...+++++.+.++.++.+|++++++++++++++.+.++++|++
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l 80 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV 80 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5899999999999999999999999988865 455677777787777789999999999999999999999999999999
Q ss_pred EECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHH-HHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHHH
Q 022386 94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL-KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 172 (298)
Q Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~s 172 (298)
|||+|.....++.+.+.++|+.++++|+.++++++++++ |.+++++ .++||++||..+..+.+....|+++
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~~iv~vsS~~~~~~~~~~~~Y~~s 152 (239)
T TIGR01831 81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQ--------GGRIITLASVSGVMGNRGQVNYSAA 152 (239)
T ss_pred EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcC--------CeEEEEEcchhhccCCCCCcchHHH
Confidence 999998766677778899999999999999999999875 4554443 5789999999999898899999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCCCCcc
Q 022386 173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVN 252 (298)
Q Consensus 173 K~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~ 252 (298)
|+++..++++++.|+. ++||+++.|+||+++|++.... .+..+......|++++.+|+|+++.++||+++.+.+++
T Consensus 153 K~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~ 228 (239)
T TIGR01831 153 KAGLIGATKALAVELA-KRKITVNCIAPGLIDTEMLAEV---EHDLDEALKTVPMNRMGQPAEVASLAGFLMSDGASYVT 228 (239)
T ss_pred HHHHHHHHHHHHHHHh-HhCeEEEEEEEccCccccchhh---hHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCcc
Confidence 9999999999999997 7799999999999998865432 12233344567888999999999999999999999999
Q ss_pred ccEEEeCCCC
Q 022386 253 GNTLIVDGGN 262 (298)
Q Consensus 253 G~~i~~dgG~ 262 (298)
|+.+.+|||.
T Consensus 229 g~~~~~~gg~ 238 (239)
T TIGR01831 229 RQVISVNGGM 238 (239)
T ss_pred CCEEEecCCc
Confidence 9999999994
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-38 Score=267.63 Aligned_cols=242 Identities=28% Similarity=0.340 Sum_probs=210.5
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
.++++|+++||||+++||++++++|+++|+.|++.+|+.+.+++....+ +.++.++.+|+++.++++++++++.+.+
T Consensus 2 ~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (245)
T PRK12936 2 FDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL---GERVKIFPANLSDRDEVKALGQKAEADL 78 (245)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4678999999999999999999999999999999999877766655443 4568889999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
+++|++|||||.....++.+.+.++|++.+++|+.+++++++++.+.+.++. .++||++||..+..+.+...
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~ 150 (245)
T PRK12936 79 EGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRR--------YGRIINITSVVGVTGNPGQA 150 (245)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhC--------CCEEEEECCHHhCcCCCCCc
Confidence 9999999999987767777788899999999999999999999999887654 57899999998888888899
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~ 247 (298)
.|+.+|+++..+++.++.++. +.||++++|+||+++|++.... .+...+......+..++.+|+|+++.+.||+++.
T Consensus 151 ~Y~~sk~a~~~~~~~la~~~~-~~~i~v~~i~pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~~~~ 227 (245)
T PRK12936 151 NYCASKAGMIGFSKSLAQEIA-TRNVTVNCVAPGFIESAMTGKL--NDKQKEAIMGAIPMKRMGTGAEVASAVAYLASSE 227 (245)
T ss_pred chHHHHHHHHHHHHHHHHHhh-HhCeEEEEEEECcCcCchhccc--ChHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCcc
Confidence 999999999999999999997 7799999999999988754332 2222333445567788999999999999999988
Q ss_pred CCCccccEEEeCCCCC
Q 022386 248 GKYVNGNTLIVDGGNW 263 (298)
Q Consensus 248 ~~~~~G~~i~~dgG~~ 263 (298)
..+++|+.+.+|||..
T Consensus 228 ~~~~~G~~~~~~~g~~ 243 (245)
T PRK12936 228 AAYVTGQTIHVNGGMA 243 (245)
T ss_pred ccCcCCCEEEECCCcc
Confidence 8899999999999965
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-38 Score=274.89 Aligned_cols=239 Identities=28% Similarity=0.347 Sum_probs=205.2
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhH-------HHHHHHHHHhCCCCeEEEEccCCCHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-------LRSAVAALHSLGIPAIGLEGDVRKREDAVRV 79 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~ 79 (298)
|+++++|+++||||++|||+++++.|+++|++|++++|+.+. +++..+++...+.++.+++||++++++++++
T Consensus 1 ~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~ 80 (273)
T PRK08278 1 MMSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAA 80 (273)
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHH
Confidence 345789999999999999999999999999999999997542 4555666666677899999999999999999
Q ss_pred HHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 80 VESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 80 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
++++.+.++++|++|||||.....++.+.+.++|++.+++|+.++++++++++|+|+++. .|+||+++|..+
T Consensus 81 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~--------~g~iv~iss~~~ 152 (273)
T PRK08278 81 VAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSE--------NPHILTLSPPLN 152 (273)
T ss_pred HHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcC--------CCEEEEECCchh
Confidence 999999999999999999987777788889999999999999999999999999998765 588999999887
Q ss_pred ccCC--CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCC-cccCCcccCcCChHHHHHHHhhhccCCCCCCHHHH
Q 022386 160 YTAT--WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG-PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236 (298)
Q Consensus 160 ~~~~--~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv 236 (298)
..+. ++...|++||++++.++++++.|++ ++||+||+|+|| +++|+...... . ...+..++.+|+++
T Consensus 153 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~-~~~I~v~~i~Pg~~i~t~~~~~~~-~--------~~~~~~~~~~p~~v 222 (273)
T PRK08278 153 LDPKWFAPHTAYTMAKYGMSLCTLGLAEEFR-DDGIAVNALWPRTTIATAAVRNLL-G--------GDEAMRRSRTPEIM 222 (273)
T ss_pred ccccccCCcchhHHHHHHHHHHHHHHHHHhh-hcCcEEEEEeCCCccccHHHHhcc-c--------ccccccccCCHHHH
Confidence 7766 7788999999999999999999998 789999999999 57775322211 1 11234567899999
Q ss_pred HHHHHHhcCCCCCCccccEEEeCCCCCC
Q 022386 237 AMAALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 237 a~~~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
++.+++|+++.+.+++|+.+ +|++...
T Consensus 223 a~~~~~l~~~~~~~~~G~~~-~~~~~~~ 249 (273)
T PRK08278 223 ADAAYEILSRPAREFTGNFL-IDEEVLR 249 (273)
T ss_pred HHHHHHHhcCccccceeEEE-eccchhh
Confidence 99999999998889999987 6777544
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-38 Score=266.55 Aligned_cols=233 Identities=25% Similarity=0.350 Sum_probs=195.2
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCC-hhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
..|++|+++||||++|||+++++.|+++|++|+++.++ .+..+++.+++ .+.++.+|++|++++.++++ .
T Consensus 2 ~~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~-----~~~~~~~D~~~~~~~~~~~~----~ 72 (237)
T PRK12742 2 GAFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET-----GATAVQTDSADRDAVIDVVR----K 72 (237)
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh-----CCeEEecCCCCHHHHHHHHH----H
Confidence 45789999999999999999999999999999888764 34444333322 25678899999998887765 3
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc-cCCCC
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWY 165 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~-~~~~~ 165 (298)
++++|++|||||.....+..+.+.++|++.+++|+.+++.+++.+++.|.+ .++||++||..+. .+.+.
T Consensus 73 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~----------~g~iv~isS~~~~~~~~~~ 142 (237)
T PRK12742 73 SGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPE----------GGRIIIIGSVNGDRMPVAG 142 (237)
T ss_pred hCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc----------CCeEEEEeccccccCCCCC
Confidence 578999999999876666777889999999999999999999999999964 4789999998874 46678
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcC
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s 245 (298)
...|+++|++++.+++.++.++. ++||+||.|+||+++|++..... +..+......+.+++.+|+|+++.+.||++
T Consensus 143 ~~~Y~~sKaa~~~~~~~la~~~~-~~gi~v~~v~Pg~~~t~~~~~~~---~~~~~~~~~~~~~~~~~p~~~a~~~~~l~s 218 (237)
T PRK12742 143 MAAYAASKSALQGMARGLARDFG-PRGITINVVQPGPIDTDANPANG---PMKDMMHSFMAIKRHGRPEEVAGMVAWLAG 218 (237)
T ss_pred CcchHHhHHHHHHHHHHHHHHHh-hhCeEEEEEecCcccCCcccccc---HHHHHHHhcCCCCCCCCHHHHHHHHHHHcC
Confidence 88999999999999999999997 78999999999999988643321 222334455678889999999999999999
Q ss_pred CCCCCccccEEEeCCCCC
Q 022386 246 DAGKYVNGNTLIVDGGNW 263 (298)
Q Consensus 246 ~~~~~~~G~~i~~dgG~~ 263 (298)
+.+.++||+.+.+|||+.
T Consensus 219 ~~~~~~~G~~~~~dgg~~ 236 (237)
T PRK12742 219 PEASFVTGAMHTIDGAFG 236 (237)
T ss_pred cccCcccCCEEEeCCCcC
Confidence 999999999999999953
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-38 Score=270.17 Aligned_cols=249 Identities=27% Similarity=0.378 Sum_probs=215.6
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
+.++++|+++||||+++||+++++.|+++|++|++++|+.+..++..+.+.+.+.++.++++|+++.++++++++.+.+.
T Consensus 2 ~~~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 81 (262)
T PRK13394 2 MSNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAER 81 (262)
T ss_pred cccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence 44688999999999999999999999999999999999998888888888877778889999999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHH-HhcCCCCCCCCCCcEEEEecccccccCCCC
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL-KKGGRGQASSSSGGIIINISATLHYTATWY 165 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~~~~~~~~g~iv~vss~~~~~~~~~ 165 (298)
++++|++|||+|.....+..+.+.++++..+++|+.+++.+++.+++.| ++.+ .++||++||..+..+.+.
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~--------~~~iv~~ss~~~~~~~~~ 153 (262)
T PRK13394 82 FGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDR--------GGVVIYMGSVHSHEASPL 153 (262)
T ss_pred cCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcC--------CcEEEEEcchhhcCCCCC
Confidence 9999999999998766777777889999999999999999999999999 5443 588999999988888888
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC---------hHHHH-HHHhhhccCCCCCCHHH
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---------PEEIR-SKATDYMAAYKFGEKWD 235 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~---------~~~~~-~~~~~~~~~~~~~~~~d 235 (298)
...|+++|+++..+++.++.++. +.+|+++.|.||+++|+....... .++.. ..+....+.+.+.+++|
T Consensus 154 ~~~y~~sk~a~~~~~~~la~~~~-~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 232 (262)
T PRK13394 154 KSAYVTAKHGLLGLARVLAKEGA-KHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVED 232 (262)
T ss_pred CcccHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHH
Confidence 88999999999999999999987 779999999999999875432211 11111 12223445678999999
Q ss_pred HHHHHHHhcCCCCCCccccEEEeCCCCCC
Q 022386 236 IAMAALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 236 va~~~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
+++++.++++....+++|+.|.+|+|.++
T Consensus 233 va~a~~~l~~~~~~~~~g~~~~~~~g~~~ 261 (262)
T PRK13394 233 VAQTVLFLSSFPSAALTGQSFVVSHGWFM 261 (262)
T ss_pred HHHHHHHHcCccccCCcCCEEeeCCceec
Confidence 99999999988778899999999999754
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=267.04 Aligned_cols=245 Identities=31% Similarity=0.475 Sum_probs=213.8
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
+|++|+++||||+++||.+++++|+++|++|++++|+.+..++..+.+. .+.++.+++||++|+++++++++++.+.++
T Consensus 2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~ 80 (252)
T PRK06138 2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA-AGGRAFARQGDVGSAEAVEALVDFVAARWG 80 (252)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 5789999999999999999999999999999999999887777776665 456688999999999999999999999999
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchh
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~ 168 (298)
++|++|||+|.....++.+.+.+++++.+++|+.+++.+++.+++.|++.+ .++|+++||..+..+.+....
T Consensus 81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~~ii~~sS~~~~~~~~~~~~ 152 (252)
T PRK06138 81 RLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG--------GGSIVNTASQLALAGGRGRAA 152 (252)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC--------CeEEEEECChhhccCCCCccH
Confidence 999999999987777777889999999999999999999999999998765 588999999988888888899
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC----ChHHHHHHHhhhccCCCCCCHHHHHHHHHHhc
Q 022386 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL----APEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (298)
Q Consensus 169 Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~ 244 (298)
|+.+|++++.++++++.|+. .+||++++++||++.|++..... .++..........+..++.+++|+++.+++++
T Consensus 153 Y~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~ 231 (252)
T PRK06138 153 YVASKGAIASLTRAMALDHA-TDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLA 231 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHH-hcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence 99999999999999999997 77999999999999887643321 12222223333445667889999999999999
Q ss_pred CCCCCCccccEEEeCCCCC
Q 022386 245 SDAGKYVNGNTLIVDGGNW 263 (298)
Q Consensus 245 s~~~~~~~G~~i~~dgG~~ 263 (298)
.+...+++|+.+.+|||..
T Consensus 232 ~~~~~~~~g~~~~~~~g~~ 250 (252)
T PRK06138 232 SDESSFATGTTLVVDGGWL 250 (252)
T ss_pred CchhcCccCCEEEECCCee
Confidence 9888999999999999954
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-38 Score=265.26 Aligned_cols=222 Identities=18% Similarity=0.263 Sum_probs=191.9
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
+++||+++||||++|||++++++|+++|++|++++|+.+.+++..+.+...+.++..++||++++++++++++++.+.++
T Consensus 2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (227)
T PRK08862 2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFN 81 (227)
T ss_pred CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 57899999999999999999999999999999999999988888888877777788899999999999999999999999
Q ss_pred -CccEEEECCCCC-CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 89 -KLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 89 -~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
++|++|||||.. ...++.+.+.++|.+.+++|+.+++.+++.++|+|.+++. +|+||++||..+. +.+
T Consensus 82 ~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~-------~g~Iv~isS~~~~---~~~ 151 (227)
T PRK08862 82 RAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNK-------KGVIVNVISHDDH---QDL 151 (227)
T ss_pred CCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-------CceEEEEecCCCC---CCc
Confidence 999999999854 4467788899999999999999999999999999986531 5899999997544 457
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
..|+++|+|+.+|+++++.|++ ++|||||+|+||+++|+... .++.+.+ .. +|++.++.||++
T Consensus 152 ~~Y~asKaal~~~~~~la~el~-~~~Irvn~v~PG~i~t~~~~---~~~~~~~-~~-----------~~~~~~~~~l~~- 214 (227)
T PRK08862 152 TGVESSNALVSGFTHSWAKELT-PFNIRVGGVVPSIFSANGEL---DAVHWAE-IQ-----------DELIRNTEYIVA- 214 (227)
T ss_pred chhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEecCcCcCCCcc---CHHHHHH-HH-----------HHHHhheeEEEe-
Confidence 7899999999999999999998 88999999999999987321 1222211 11 699999999997
Q ss_pred CCCCccccEEEe
Q 022386 247 AGKYVNGNTLIV 258 (298)
Q Consensus 247 ~~~~~~G~~i~~ 258 (298)
+.|+||+.+..
T Consensus 215 -~~~~tg~~~~~ 225 (227)
T PRK08862 215 -NEYFSGRVVEA 225 (227)
T ss_pred -cccccceEEee
Confidence 67999998753
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=269.72 Aligned_cols=258 Identities=28% Similarity=0.418 Sum_probs=220.7
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC--CCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
+|++|+++|||++++||.++++.|+++|++|++++|+.+..+...+.+... +.++.++.||++++++++++++++.+.
T Consensus 4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (276)
T PRK05875 4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW 83 (276)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999987777777776654 346888999999999999999999999
Q ss_pred hCCccEEEECCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC
Q 022386 87 FGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (298)
Q Consensus 87 ~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~ 165 (298)
++++|++|||+|... ..++.+.+.++|..++++|+.+++.+++++.+.|.+.+ .++|+++||..+..+.+.
T Consensus 84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~g~iv~~sS~~~~~~~~~ 155 (276)
T PRK05875 84 HGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGG--------GGSFVGISSIAASNTHRW 155 (276)
T ss_pred cCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--------CcEEEEEechhhcCCCCC
Confidence 999999999999653 35666778899999999999999999999999998754 578999999998888788
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcC
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s 245 (298)
...|+++|++++.+++.++.++. ..+|+++.|.||+++|++.......+..........+..++.+++|+++++.||++
T Consensus 156 ~~~Y~~sK~a~~~~~~~~~~~~~-~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~ 234 (276)
T PRK05875 156 FGAYGVTKSAVDHLMKLAADELG-PSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVANLAMFLLS 234 (276)
T ss_pred CcchHHHHHHHHHHHHHHHHHhc-ccCeEEEEEecCccCCccccccccCHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcC
Confidence 89999999999999999999997 77999999999999988664433333333344455677889999999999999999
Q ss_pred CCCCCccccEEEeCCCCCCCCCCCCchhHH
Q 022386 246 DAGKYVNGNTLIVDGGNWLSNPRDLPKEAV 275 (298)
Q Consensus 246 ~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~ 275 (298)
.+...++|+.+++|+|..++....+.+.+.
T Consensus 235 ~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~ 264 (276)
T PRK05875 235 DAASWITGQVINVDGGHMLRRGPDFSSMLE 264 (276)
T ss_pred chhcCcCCCEEEECCCeeccCCccHHHHHH
Confidence 888889999999999988755445555443
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=267.72 Aligned_cols=250 Identities=30% Similarity=0.389 Sum_probs=216.9
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCc-EEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
|..+++|+++||||++|||++++++|+++|++ |++++|+.+..++..+++...+.++.++.+|++++++++++++.+.+
T Consensus 1 ~~~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (260)
T PRK06198 1 MGRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADE 80 (260)
T ss_pred CCCCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 35688999999999999999999999999999 99999998777777777766677788999999999999999999999
Q ss_pred HhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC
Q 022386 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~ 165 (298)
.++++|++|||+|.....++.+.+.+.|+..+++|+.+++.+++++++.|.++.. .|++|++||..++.+.+.
T Consensus 81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-------~g~iv~~ss~~~~~~~~~ 153 (260)
T PRK06198 81 AFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKA-------EGTIVNIGSMSAHGGQPF 153 (260)
T ss_pred HhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-------CCEEEEECCcccccCCCC
Confidence 9999999999999877677778899999999999999999999999999986531 478999999998888888
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc---C--ChHHHHHHHhhhccCCCCCCHHHHHHHH
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK---L--APEEIRSKATDYMAAYKFGEKWDIAMAA 240 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~dva~~~ 240 (298)
...|+.+|+++++++++++.|+. ..||+++.|+||++.|++.... . ..+.+........+.+++.+++|+++.+
T Consensus 154 ~~~Y~~sK~a~~~~~~~~a~e~~-~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 232 (260)
T PRK06198 154 LAAYCASKGALATLTRNAAYALL-RNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAV 232 (260)
T ss_pred cchhHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHHHHHHHH
Confidence 89999999999999999999997 7799999999999998753210 0 1122333344456778889999999999
Q ss_pred HHhcCCCCCCccccEEEeCCCCCC
Q 022386 241 LYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 241 ~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
.+|+++.+++++|+.|.+|+|.+=
T Consensus 233 ~~l~~~~~~~~~G~~~~~~~~~~~ 256 (260)
T PRK06198 233 AFLLSDESGLMTGSVIDFDQSVWG 256 (260)
T ss_pred HHHcChhhCCccCceEeECCcccc
Confidence 999998888999999999999763
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-37 Score=264.71 Aligned_cols=243 Identities=36% Similarity=0.534 Sum_probs=210.9
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcC-ChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
.+++|+++||||++|||.+++++|+++|++|+++.+ +.+..++..+.+.+.+.++.+++||+++++++.++++++.+.+
T Consensus 3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (247)
T PRK12935 3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHF 82 (247)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 478999999999999999999999999999987655 4556666777777767789999999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
+++|++|||||......+.+.+.+.+++.+++|+.+++.++++++|.|.+.. .++||++||..+..+.+++.
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~ 154 (247)
T PRK12935 83 GKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAE--------EGRIISISSIIGQAGGFGQT 154 (247)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--------CcEEEEEcchhhcCCCCCCc
Confidence 9999999999987767777788899999999999999999999999998654 57899999998888888899
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~ 247 (298)
.|++||++++.++++++.|+. +.||+++.+.||+++|+.... . ++..........+.+++..++|+++++.++++.
T Consensus 155 ~Y~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~pg~v~t~~~~~-~-~~~~~~~~~~~~~~~~~~~~edva~~~~~~~~~- 230 (247)
T PRK12935 155 NYSAAKAGMLGFTKSLALELA-KTNVTVNAICPGFIDTEMVAE-V-PEEVRQKIVAKIPKKRFGQADEIAKGVVYLCRD- 230 (247)
T ss_pred chHHHHHHHHHHHHHHHHHHH-HcCcEEEEEEeCCCcChhhhh-c-cHHHHHHHHHhCCCCCCcCHHHHHHHHHHHcCc-
Confidence 999999999999999999997 779999999999999875432 2 233334444566778899999999999999975
Q ss_pred CCCccccEEEeCCCCC
Q 022386 248 GKYVNGNTLIVDGGNW 263 (298)
Q Consensus 248 ~~~~~G~~i~~dgG~~ 263 (298)
..+++|+.+++|||..
T Consensus 231 ~~~~~g~~~~i~~g~~ 246 (247)
T PRK12935 231 GAYITGQQLNINGGLY 246 (247)
T ss_pred ccCccCCEEEeCCCcc
Confidence 4589999999999953
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-38 Score=266.33 Aligned_cols=232 Identities=25% Similarity=0.348 Sum_probs=198.7
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
+|++|+++||||++|||++++++|+++|++|++++|+.... ...++.++.+|++++ ++++.+.++
T Consensus 2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~~~~~~~D~~~~------~~~~~~~~~ 66 (235)
T PRK06550 2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD---------LSGNFHFLQLDLSDD------LEPLFDWVP 66 (235)
T ss_pred CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc---------cCCcEEEEECChHHH------HHHHHHhhC
Confidence 47899999999999999999999999999999999975321 134578899999987 445555678
Q ss_pred CccEEEECCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 89 KLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 89 ~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
++|++|||||... ..++.+.+.++|++.+++|+.++++++++++|.+.+++ .++||++||..+..+.+...
T Consensus 67 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~ 138 (235)
T PRK06550 67 SVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERK--------SGIIINMCSIASFVAGGGGA 138 (235)
T ss_pred CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--------CcEEEEEcChhhccCCCCCc
Confidence 9999999999753 35667788999999999999999999999999998765 58899999999988888889
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~ 247 (298)
.|+.+|++++.++++++.|+. ++||++|.|.||+++|+.......++..........+.+++.+|+|+|+++.||+++.
T Consensus 139 ~Y~~sK~a~~~~~~~la~~~~-~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~ 217 (235)
T PRK06550 139 AYTASKHALAGFTKQLALDYA-KDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLFLASGK 217 (235)
T ss_pred ccHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCCccCcccccccCchHHHHHHhccCCcCCCCCHHHHHHHHHHHcChh
Confidence 999999999999999999997 7899999999999999865443333444444556678889999999999999999998
Q ss_pred CCCccccEEEeCCCCCC
Q 022386 248 GKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 248 ~~~~~G~~i~~dgG~~~ 264 (298)
+.+++|+.+.+|||.++
T Consensus 218 ~~~~~g~~~~~~gg~~~ 234 (235)
T PRK06550 218 ADYMQGTIVPIDGGWTL 234 (235)
T ss_pred hccCCCcEEEECCceec
Confidence 89999999999999654
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=266.57 Aligned_cols=240 Identities=28% Similarity=0.368 Sum_probs=203.3
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC--CCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
+|++|+++||||++|||+++|+.|+++|++|++++|+.+.+++..+.+... +..+.++.||++|+++++++++.+.+.
T Consensus 1 ~~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 80 (256)
T PRK09186 1 MLKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEK 80 (256)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Confidence 467999999999999999999999999999999999988888887777543 234677899999999999999999999
Q ss_pred hCCccEEEECCCCCC---CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 87 FGKLDILVNAAAGNF---LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 87 ~~~id~li~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
++++|++||||+... ..++.+.+.+.++..+++|+.+++.++++++|+|++++ .++||++||..+..+.
T Consensus 81 ~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~ 152 (256)
T PRK09186 81 YGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQG--------GGNLVNISSIYGVVAP 152 (256)
T ss_pred cCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC--------CceEEEEechhhhccc
Confidence 999999999997532 34667888999999999999999999999999998765 5789999997765331
Q ss_pred C----------CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCH
Q 022386 164 W----------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEK 233 (298)
Q Consensus 164 ~----------~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (298)
. ....|++||++++.++++++.|+. ++||+|+.|+||.+.++. ............+..++.+|
T Consensus 153 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~-~~~i~v~~i~Pg~~~~~~------~~~~~~~~~~~~~~~~~~~~ 225 (256)
T PRK09186 153 KFEIYEGTSMTSPVEYAAIKAGIIHLTKYLAKYFK-DSNIRVNCVSPGGILDNQ------PEAFLNAYKKCCNGKGMLDP 225 (256)
T ss_pred cchhccccccCCcchhHHHHHHHHHHHHHHHHHhC-cCCeEEEEEecccccCCC------CHHHHHHHHhcCCccCCCCH
Confidence 1 123699999999999999999997 789999999999987642 12233334444566778999
Q ss_pred HHHHHHHHHhcCCCCCCccccEEEeCCCCC
Q 022386 234 WDIAMAALYLASDAGKYVNGNTLIVDGGNW 263 (298)
Q Consensus 234 ~dva~~~~~L~s~~~~~~~G~~i~~dgG~~ 263 (298)
+|+|+.+++++++.+.+++|+.+.+|||..
T Consensus 226 ~dva~~~~~l~~~~~~~~~g~~~~~~~g~~ 255 (256)
T PRK09186 226 DDICGTLVFLLSDQSKYITGQNIIVDDGFS 255 (256)
T ss_pred HHhhhhHhheeccccccccCceEEecCCcc
Confidence 999999999999988999999999999964
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-37 Score=263.65 Aligned_cols=241 Identities=27% Similarity=0.302 Sum_probs=209.6
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh-HHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
|+++||||+++||++++++|+++|++|++++|+.. ...+........+.++.++.+|++++++++++++.+.+.++++|
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id 82 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD 82 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 69999999999999999999999999999999853 23333333333456789999999999999999999999999999
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHH
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~ 171 (298)
++|||+|.....++.+.+.++|++.+++|+.+++++++++++.|++.. .++||++||..+..+.+....|+.
T Consensus 83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~~iv~iss~~~~~~~~~~~~Y~~ 154 (245)
T PRK12824 83 ILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQG--------YGRIINISSVNGLKGQFGQTNYSA 154 (245)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC--------CeEEEEECChhhccCCCCChHHHH
Confidence 999999987777777889999999999999999999999999998765 689999999999888888999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCCCCc
Q 022386 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYV 251 (298)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~ 251 (298)
+|++++.+++.++.++. +.||+++.+.||++.|++.... .+.....+....+.+.+.+++|+++.+.+|+++.+.++
T Consensus 155 sK~a~~~~~~~l~~~~~-~~~i~v~~v~pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~ 231 (245)
T PRK12824 155 AKAGMIGFTKALASEGA-RYGITVNCIAPGYIATPMVEQM--GPEVLQSIVNQIPMKRLGTPEEIAAAVAFLVSEAAGFI 231 (245)
T ss_pred HHHHHHHHHHHHHHHHH-HhCeEEEEEEEcccCCcchhhc--CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCc
Confidence 99999999999999997 7799999999999998764332 23444445556678889999999999999998888899
Q ss_pred cccEEEeCCCCCC
Q 022386 252 NGNTLIVDGGNWL 264 (298)
Q Consensus 252 ~G~~i~~dgG~~~ 264 (298)
+|+.+.+|||+.+
T Consensus 232 ~G~~~~~~~g~~~ 244 (245)
T PRK12824 232 TGETISINGGLYM 244 (245)
T ss_pred cCcEEEECCCeec
Confidence 9999999999754
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-37 Score=264.84 Aligned_cols=247 Identities=32% Similarity=0.417 Sum_probs=212.2
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEE-cCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
|.+|++++++||||++|||.++++.|+++|+.|+++ .|+.+..++..+.+...+.++.++++|++|++++.++++++.+
T Consensus 1 ~~~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~ 80 (254)
T PRK12746 1 MKNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKN 80 (254)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHH
Confidence 345789999999999999999999999999998775 6777777777777766566788999999999999999999998
Q ss_pred Hh------CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 86 HF------GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 86 ~~------~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
.+ +++|++|||||......+.+.+.+.|+..+++|+.+++++++++++.|.+ .+++|++||..+
T Consensus 81 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~----------~~~~v~~sS~~~ 150 (254)
T PRK12746 81 ELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA----------EGRVINISSAEV 150 (254)
T ss_pred HhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc----------CCEEEEECCHHh
Confidence 87 57999999999876677778899999999999999999999999999864 367999999988
Q ss_pred ccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHH
Q 022386 160 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239 (298)
Q Consensus 160 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (298)
..+.+++..|++||++++.++++++.++. ++|++++.+.||+++|+........++...........+++.+++|++++
T Consensus 151 ~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~-~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 229 (254)
T PRK12746 151 RLGFTGSIAYGLSKGALNTMTLPLAKHLG-ERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADA 229 (254)
T ss_pred cCCCCCCcchHhhHHHHHHHHHHHHHHHh-hcCcEEEEEEECCccCcchhhhccChhHHHHHHhcCCcCCCCCHHHHHHH
Confidence 88888899999999999999999999997 77999999999999988654433333333333445566788899999999
Q ss_pred HHHhcCCCCCCccccEEEeCCCCCC
Q 022386 240 ALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 240 ~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
+.+++++.+.+++|+.++++||.++
T Consensus 230 ~~~l~~~~~~~~~g~~~~i~~~~~~ 254 (254)
T PRK12746 230 VAFLASSDSRWVTGQIIDVSGGFCL 254 (254)
T ss_pred HHHHcCcccCCcCCCEEEeCCCccC
Confidence 9999998778899999999999653
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=275.42 Aligned_cols=227 Identities=22% Similarity=0.281 Sum_probs=199.4
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
+.++++|+++||||++|||+++++.|+++|++|++++|+.+.++++.+++.+.+.++.++.+|++|.++++++++++.+.
T Consensus 2 ~~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~ 81 (330)
T PRK06139 2 MGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASF 81 (330)
T ss_pred CcCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHh
Confidence 45688999999999999999999999999999999999999999998888888888999999999999999999999998
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
++++|++|||||+...+++.+.+.++|++.+++|+.++++++++++|+|.+++ .|+||+++|..+..+.+..
T Consensus 82 ~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~--------~g~iV~isS~~~~~~~p~~ 153 (330)
T PRK06139 82 GGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG--------HGIFINMISLGGFAAQPYA 153 (330)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC--------CCEEEEEcChhhcCCCCCc
Confidence 99999999999988778888999999999999999999999999999999865 6899999999999998999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCC-CCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcC
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~-~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s 245 (298)
..|++||+++.+|+++++.|+. + .||+|+.|+||+++|+......... . ....+...+.+|+++|+.+++++.
T Consensus 154 ~~Y~asKaal~~~~~sL~~El~-~~~gI~V~~v~Pg~v~T~~~~~~~~~~---~--~~~~~~~~~~~pe~vA~~il~~~~ 227 (330)
T PRK06139 154 AAYSASKFGLRGFSEALRGELA-DHPDIHVCDVYPAFMDTPGFRHGANYT---G--RRLTPPPPVYDPRRVAKAVVRLAD 227 (330)
T ss_pred hhHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEecCCccCcccccccccc---c--ccccCCCCCCCHHHHHHHHHHHHh
Confidence 9999999999999999999997 5 4899999999999998643211000 0 011123346799999999999986
Q ss_pred CC
Q 022386 246 DA 247 (298)
Q Consensus 246 ~~ 247 (298)
.+
T Consensus 228 ~~ 229 (330)
T PRK06139 228 RP 229 (330)
T ss_pred CC
Confidence 53
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-37 Score=262.47 Aligned_cols=246 Identities=28% Similarity=0.424 Sum_probs=212.6
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
|.++++|+++||||++|||++++++|+++|++|++++|+.+..+++.+.+...+.++.++.+|+++.++++++++++.+.
T Consensus 1 ~~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (250)
T PRK07774 1 MGRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSA 80 (250)
T ss_pred CcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999987777777777666667888999999999999999999999
Q ss_pred hCCccEEEECCCCCC---CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 87 FGKLDILVNAAAGNF---LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 87 ~~~id~li~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
++++|++|||||... ..++.+.+.+.+++.+++|+.+++.++++++++|.+.+ .++||++||..++.
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~-- 150 (250)
T PRK07774 81 FGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRG--------GGAIVNQSSTAAWL-- 150 (250)
T ss_pred hCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhC--------CcEEEEEecccccC--
Confidence 999999999999753 34566778899999999999999999999999998754 58899999987754
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHh
Q 022386 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (298)
Q Consensus 164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L 243 (298)
+...|++||++++.+++++++++. ..||+++.++||.++|+..... .++..........+..++.+++|+++.++++
T Consensus 151 -~~~~Y~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~pg~~~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~ 227 (250)
T PRK07774 151 -YSNFYGLAKVGLNGLTQQLARELG-GMNIRVNAIAPGPIDTEATRTV-TPKEFVADMVKGIPLSRMGTPEDLVGMCLFL 227 (250)
T ss_pred -CccccHHHHHHHHHHHHHHHHHhC-ccCeEEEEEecCcccCcccccc-CCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 356899999999999999999997 7799999999999998865433 3344445555666777788999999999999
Q ss_pred cCCCCCCccccEEEeCCCCCCC
Q 022386 244 ASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 244 ~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
+++.....+|+.+++++|+.+.
T Consensus 228 ~~~~~~~~~g~~~~v~~g~~~~ 249 (250)
T PRK07774 228 LSDEASWITGQIFNVDGGQIIR 249 (250)
T ss_pred hChhhhCcCCCEEEECCCeecc
Confidence 9876667899999999998764
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-37 Score=264.36 Aligned_cols=241 Identities=29% Similarity=0.406 Sum_probs=209.5
Q ss_pred EEEecCCchhHHHHHHHHHHcCCcEEEEcCC-hhHHHHHHHHHHhCC--CCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 15 ~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~~--~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
++||||++|||+++++.|+++|++|++++|+ .+.++++.+.+.... ..+..++||++++++++++++++.+.++++|
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 81 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS 81 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence 8999999999999999999999999999998 666777777665542 2355688999999999999999999999999
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHH
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~ 171 (298)
++|||||.....++.+.+.+++++++++|+.+++.+++.+++.|.+.+ .++||++||..+..+.+....|++
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--------~~~ii~~ss~~~~~~~~~~~~Y~~ 153 (251)
T PRK07069 82 VLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ--------PASIVNISSVAAFKAEPDYTAYNA 153 (251)
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC--------CcEEEEecChhhccCCCCCchhHH
Confidence 999999987777788889999999999999999999999999998764 588999999999988888999999
Q ss_pred HHHHHHHHHHHHHHHhcCCC--CeEEEEEeCCcccCCcccCc---CChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 172 AKAAVDSITRSLALEWGTDY--AIRVNGIAPGPIKDTAGVSK---LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~--girv~~i~PG~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
+|++++.++++++.|++ +. +|+++.|+||+++|++.... ...++....+....+..++.+|+|+++.+++|+++
T Consensus 154 sK~a~~~~~~~la~e~~-~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~ 232 (251)
T PRK07069 154 SKAAVASLTKSIALDCA-RRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASD 232 (251)
T ss_pred HHHHHHHHHHHHHHHhc-ccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHHHHHHHHHHcCc
Confidence 99999999999999986 44 59999999999999865432 12234444555667778899999999999999999
Q ss_pred CCCCccccEEEeCCCCCC
Q 022386 247 AGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 247 ~~~~~~G~~i~~dgG~~~ 264 (298)
.+.+++|+.+.+|||.++
T Consensus 233 ~~~~~~g~~i~~~~g~~~ 250 (251)
T PRK07069 233 ESRFVTGAELVIDGGICA 250 (251)
T ss_pred cccCccCCEEEECCCeec
Confidence 889999999999999653
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-37 Score=262.55 Aligned_cols=244 Identities=28% Similarity=0.404 Sum_probs=205.8
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEc-CChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMG-RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~-r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|+++||||++|||.++++.|+++|++|+++. |+.+.+++..+.+...+.++.++.||+++.++++++++++.+.++++
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL 81 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence 37999999999999999999999999988764 56666777777777767789999999999999999999999999999
Q ss_pred cEEEECCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC-chh
Q 022386 91 DILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIH 168 (298)
Q Consensus 91 d~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~-~~~ 168 (298)
|++|||||.... .++.+.+.++++..+++|+.+++++++.+++.+..++. ...++||+++|..+..+.+. ...
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-----~~~~~ii~~sS~~~~~~~~~~~~~ 156 (248)
T PRK06947 82 DALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRG-----GRGGAIVNVSSIASRLGSPNEYVD 156 (248)
T ss_pred CEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCC-----CCCcEEEEECchhhcCCCCCCCcc
Confidence 999999997643 45667889999999999999999999999999876431 11478999999888777654 468
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCC
Q 022386 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (298)
Q Consensus 169 Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~ 248 (298)
|++||++++.++++++.++. +.||+|+.|.||+++|++..... .++.........+..+..+++|+++.+++|+++.+
T Consensus 157 Y~~sK~~~~~~~~~la~~~~-~~~i~v~~i~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~e~va~~~~~l~~~~~ 234 (248)
T PRK06947 157 YAGSKGAVDTLTLGLAKELG-PHGVRVNAVRPGLIETEIHASGG-QPGRAARLGAQTPLGRAGEADEVAETIVWLLSDAA 234 (248)
T ss_pred cHhhHHHHHHHHHHHHHHhh-hhCcEEEEEeccCcccccccccC-CHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence 99999999999999999997 77999999999999998643321 12222333445577778899999999999999988
Q ss_pred CCccccEEEeCCCC
Q 022386 249 KYVNGNTLIVDGGN 262 (298)
Q Consensus 249 ~~~~G~~i~~dgG~ 262 (298)
.+++|+.|.+|||.
T Consensus 235 ~~~~G~~~~~~gg~ 248 (248)
T PRK06947 235 SYVTGALLDVGGGR 248 (248)
T ss_pred cCcCCceEeeCCCC
Confidence 99999999999984
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-37 Score=267.49 Aligned_cols=246 Identities=22% Similarity=0.313 Sum_probs=197.2
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCC-hhHHHHHHHHHHhC-CCCeEEEEccCCCHHHH----HHHHHHHHHH
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSL-GIPAIGLEGDVRKREDA----VRVVESTINH 86 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~-~~~~~~~~~Dls~~~~~----~~~~~~~~~~ 86 (298)
++++||||++|||+++++.|+++|++|++++|+ .+.++...+++... +.++.++.||++|++++ +++++.+.+.
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 689999999999999999999999999998764 55666666766543 45677889999999865 5566666677
Q ss_pred hCCccEEEECCCCCCCCCCCCCCH-----------HHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEec
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSP-----------NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS 155 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vs 155 (298)
++++|+||||||.....++.+.+. ++|.+++++|+.++++++++++++|+.... ...+..+.||+++
T Consensus 82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~--~~~~~~~~iv~~~ 159 (267)
T TIGR02685 82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRA--EQRSTNLSIVNLC 159 (267)
T ss_pred cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhccc--ccCCCCeEEEEeh
Confidence 899999999999765444443333 358999999999999999999999965321 1112357899999
Q ss_pred ccccccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCC-CCCCHH
Q 022386 156 ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY-KFGEKW 234 (298)
Q Consensus 156 s~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 234 (298)
|..+..+.+.+..|++||+++++|+++++.|+. ++||+|+.|+||+++++... +.+.........+.. ++.+|+
T Consensus 160 s~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 234 (267)
T TIGR02685 160 DAMTDQPLLGFTMYTMAKHALEGLTRSAALELA-PLQIRVNGVAPGLSLLPDAM----PFEVQEDYRRKVPLGQREASAE 234 (267)
T ss_pred hhhccCCCcccchhHHHHHHHHHHHHHHHHHHh-hhCeEEEEEecCCccCcccc----chhHHHHHHHhCCCCcCCCCHH
Confidence 998888888899999999999999999999997 78999999999999765321 122223333344554 678999
Q ss_pred HHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 235 DIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 235 dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
|+++.++||+++.+.+++|+.+.+|||..+.
T Consensus 235 ~va~~~~~l~~~~~~~~~G~~~~v~gg~~~~ 265 (267)
T TIGR02685 235 QIADVVIFLVSPKAKYITGTCIKVDGGLSLT 265 (267)
T ss_pred HHHHHHHHHhCcccCCcccceEEECCceecc
Confidence 9999999999998999999999999998764
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-37 Score=265.51 Aligned_cols=242 Identities=26% Similarity=0.417 Sum_probs=204.5
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
..|+||+++||||++|||.+++++|+++|++|++++|+....++..+.+. ..+++||++++++++++++++.+.+
T Consensus 3 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-----~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (255)
T PRK06057 3 QRLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG-----GLFVPTDVTDEDAVNALFDTAAETY 77 (255)
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-----CcEEEeeCCCHHHHHHHHHHHHHHc
Confidence 45789999999999999999999999999999999998776665555442 2578899999999999999999999
Q ss_pred CCccEEEECCCCCCC--CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC-C
Q 022386 88 GKLDILVNAAAGNFL--VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-W 164 (298)
Q Consensus 88 ~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~-~ 164 (298)
+++|++|||||.... .++.+.+.+.|++.+++|+.+++++++.++|+|+++. .++||++||..+..+. +
T Consensus 78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--------~g~iv~~sS~~~~~g~~~ 149 (255)
T PRK06057 78 GSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG--------KGSIINTASFVAVMGSAT 149 (255)
T ss_pred CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhC--------CcEEEEEcchhhccCCCC
Confidence 999999999997532 4566778899999999999999999999999998765 5889999998776655 3
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC-hHHHHHHHhhhccCCCCCCHHHHHHHHHHh
Q 022386 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (298)
Q Consensus 165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~L 243 (298)
....|+.+|+++..+++.++.++. ++||+|+.|+||+++|+....... .++...+.....+.+++.+|+|+++++.+|
T Consensus 150 ~~~~Y~~sKaal~~~~~~l~~~~~-~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l 228 (255)
T PRK06057 150 SQISYTASKGGVLAMSRELGVQFA-RQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPMGRFAEPEEIAAAVAFL 228 (255)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHH-hhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 677899999999999999999997 779999999999999886543321 122222333345777899999999999999
Q ss_pred cCCCCCCccccEEEeCCCCC
Q 022386 244 ASDAGKYVNGNTLIVDGGNW 263 (298)
Q Consensus 244 ~s~~~~~~~G~~i~~dgG~~ 263 (298)
+++.+.+++|+.+.+|||..
T Consensus 229 ~~~~~~~~~g~~~~~~~g~~ 248 (255)
T PRK06057 229 ASDDASFITASTFLVDGGIS 248 (255)
T ss_pred hCccccCccCcEEEECCCee
Confidence 99999999999999999965
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-37 Score=263.55 Aligned_cols=247 Identities=34% Similarity=0.458 Sum_probs=216.4
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
++++|+++||||+++||++++++|+++|++|++++|+.+..++...++...+.++.++.||++++++++++++.+.+.++
T Consensus 1 ~~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 80 (258)
T PRK12429 1 MLKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFG 80 (258)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 46789999999999999999999999999999999998888888888877777899999999999999999999999999
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchh
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~ 168 (298)
++|++|||||.....+..+.+.++++..+++|+.+++.+++.+++.|++++ .++||++||..+..+.++...
T Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~~iv~iss~~~~~~~~~~~~ 152 (258)
T PRK12429 81 GVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG--------GGRIINMASVHGLVGSAGKAA 152 (258)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC--------CeEEEEEcchhhccCCCCcch
Confidence 999999999987777777888999999999999999999999999998865 688999999999888889999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC---------ChH-HHHHHHhhhccCCCCCCHHHHHH
Q 022386 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---------APE-EIRSKATDYMAAYKFGEKWDIAM 238 (298)
Q Consensus 169 Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~---------~~~-~~~~~~~~~~~~~~~~~~~dva~ 238 (298)
|+++|+++..+++.++.|+. +.||+++.+.||+++++...... ... .....+....+.+++.+++|+++
T Consensus 153 y~~~k~a~~~~~~~l~~~~~-~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ 231 (258)
T PRK12429 153 YVSAKHGLIGLTKVVALEGA-THGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIAD 231 (258)
T ss_pred hHHHHHHHHHHHHHHHHHhc-ccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHHHHH
Confidence 99999999999999999997 77999999999999987543211 111 11123334446678999999999
Q ss_pred HHHHhcCCCCCCccccEEEeCCCCCC
Q 022386 239 AALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 239 ~~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
++.+|+.+....++|+++.+|||.+.
T Consensus 232 ~~~~l~~~~~~~~~g~~~~~~~g~~~ 257 (258)
T PRK12429 232 YALFLASFAAKGVTGQAWVVDGGWTA 257 (258)
T ss_pred HHHHHcCccccCccCCeEEeCCCEec
Confidence 99999988778899999999999653
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-37 Score=260.64 Aligned_cols=240 Identities=28% Similarity=0.374 Sum_probs=210.7
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcC-ChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
|+++||||++|||++++++|+++|++|+++.| +.+..++..+++...+.++.++.+|++++++++++++++.+.++++|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 78999999999999999999999999999888 55555655566655566799999999999999999999999999999
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHH
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~ 171 (298)
++|||+|......+.+.+.+++++.+++|+.+++.+++.+++.|++.+ .++||++||..+..+.+.+..|++
T Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--------~~~iv~iss~~~~~~~~~~~~y~~ 152 (242)
T TIGR01829 81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG--------WGRIINISSVNGQKGQFGQTNYSA 152 (242)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--------CcEEEEEcchhhcCCCCCcchhHH
Confidence 999999987666777888999999999999999999999999998765 578999999998888888999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCCCCc
Q 022386 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYV 251 (298)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~ 251 (298)
+|+++..++++++.++. +.||+++.+.||++.|+..... .++.........+..++.+|+++++.+.||++++..++
T Consensus 153 sk~a~~~~~~~la~~~~-~~~i~v~~i~pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~ 229 (242)
T TIGR01829 153 AKAGMIGFTKALAQEGA-TKGVTVNTISPGYIATDMVMAM--REDVLNSIVAQIPVGRLGRPEEIAAAVAFLASEEAGYI 229 (242)
T ss_pred HHHHHHHHHHHHHHHhh-hhCeEEEEEeeCCCcCcccccc--chHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCc
Confidence 99999999999999997 7799999999999998765332 23344445556778889999999999999999888899
Q ss_pred cccEEEeCCCCC
Q 022386 252 NGNTLIVDGGNW 263 (298)
Q Consensus 252 ~G~~i~~dgG~~ 263 (298)
+|+.+.+|||..
T Consensus 230 ~G~~~~~~gg~~ 241 (242)
T TIGR01829 230 TGATLSINGGLY 241 (242)
T ss_pred cCCEEEecCCcc
Confidence 999999999964
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-37 Score=261.41 Aligned_cols=244 Identities=27% Similarity=0.370 Sum_probs=206.8
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcC-ChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
+|+++||||++|||.+++++|+++|++|+++.+ +.+..++..+.+...+.++.+++||++|.++++++++++.+.++++
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 579999999999999999999999999988874 4455566666676666778899999999999999999999999999
Q ss_pred cEEEECCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC-chh
Q 022386 91 DILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIH 168 (298)
Q Consensus 91 d~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~-~~~ 168 (298)
|++|||||.... .++.+.+.++|++.+++|+.+++.+++++++.|.++.. .++|+||++||..+..+.+. +..
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-----~~~g~iv~~sS~~~~~~~~~~~~~ 156 (248)
T PRK06123 82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHG-----GRGGAIVNVSSMAARLGSPGEYID 156 (248)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-----CCCeEEEEECchhhcCCCCCCccc
Confidence 999999997643 45667788999999999999999999999999976421 11478999999988777665 367
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCC
Q 022386 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (298)
Q Consensus 169 Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~ 248 (298)
|+++|++++.++++++.|+. ++||+|+.|+||.+.|++..... .+..........|.+++.+++|+++++.+|+++..
T Consensus 157 Y~~sKaa~~~~~~~la~~~~-~~~i~v~~i~pg~v~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~d~a~~~~~l~~~~~ 234 (248)
T PRK06123 157 YAASKGAIDTMTIGLAKEVA-AEGIRVNAVRPGVIYTEIHASGG-EPGRVDRVKAGIPMGRGGTAEEVARAILWLLSDEA 234 (248)
T ss_pred hHHHHHHHHHHHHHHHHHhc-ccCeEEEEEecCcccCchhhccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence 99999999999999999997 77999999999999988543322 23334445566788888999999999999999888
Q ss_pred CCccccEEEeCCCC
Q 022386 249 KYVNGNTLIVDGGN 262 (298)
Q Consensus 249 ~~~~G~~i~~dgG~ 262 (298)
.+++|+.+++|||.
T Consensus 235 ~~~~g~~~~~~gg~ 248 (248)
T PRK06123 235 SYTTGTFIDVSGGR 248 (248)
T ss_pred cCccCCEEeecCCC
Confidence 89999999999973
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-37 Score=290.84 Aligned_cols=244 Identities=30% Similarity=0.433 Sum_probs=210.6
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
.+||+++||||++|||++++++|+++|++|++++|+.+.+++..+++ +.++.++.+|++++++++++++++.+.+++
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 79 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL---GPDHHALAMDVSDEAQIREGFEQLHREFGR 79 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEeccCCHHHHHHHHHHHHHHhCC
Confidence 47899999999999999999999999999999999987776665554 456788999999999999999999999999
Q ss_pred ccEEEECCCCCC--CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 90 LDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 90 id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
+|++|||||... ..++.+.+.++|++.+++|+.++++++++++|+|.+++. +++||++||..+..+.+...
T Consensus 80 iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-------g~~iv~isS~~~~~~~~~~~ 152 (520)
T PRK06484 80 IDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGH-------GAAIVNVASGAGLVALPKRT 152 (520)
T ss_pred CCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-------CCeEEEECCcccCCCCCCCc
Confidence 999999999742 356678899999999999999999999999999987541 34899999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHH-HHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE-IRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
.|+++|+++..|+++++.|+. +.||+|+.|+||+++|++......... .........+..++.+|+++++.+.||+++
T Consensus 153 ~Y~asKaal~~l~~~la~e~~-~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~v~~l~~~ 231 (520)
T PRK06484 153 AYSASKAAVISLTRSLACEWA-AKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLASD 231 (520)
T ss_pred hHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 999999999999999999997 789999999999999886543221111 122334456777888999999999999999
Q ss_pred CCCCccccEEEeCCCCCC
Q 022386 247 AGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 247 ~~~~~~G~~i~~dgG~~~ 264 (298)
.+.+++|+.+.+|||...
T Consensus 232 ~~~~~~G~~~~~~gg~~~ 249 (520)
T PRK06484 232 QASYITGSTLVVDGGWTV 249 (520)
T ss_pred cccCccCceEEecCCeec
Confidence 889999999999999754
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=266.08 Aligned_cols=237 Identities=20% Similarity=0.191 Sum_probs=199.1
Q ss_pred EEEEecCCchhHHHHHHHHHH----cCCcEEEEcCChhHHHHHHHHHHhC--CCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 14 VALLTGGGSGIGFEISLQLGK----HGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~----~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
+++||||++|||+++|++|++ .|++|++++|+.+.++++.+++... +.++.++.+|+++.++++++++.+.+.+
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP 81 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence 689999999999999999997 7999999999998888888888762 4568899999999999999999998877
Q ss_pred CCc----cEEEECCCCCCC--CCCCC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc
Q 022386 88 GKL----DILVNAAAGNFL--VPAED-LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 160 (298)
Q Consensus 88 ~~i----d~li~~ag~~~~--~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~ 160 (298)
+.+ |++|||||.... ....+ .+.++|++.+++|+.+++++++.++|.|+++. +..++||++||..+.
T Consensus 82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~------~~~~~iv~isS~~~~ 155 (256)
T TIGR01500 82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSP------GLNRTVVNISSLCAI 155 (256)
T ss_pred ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcC------CCCCEEEEECCHHhC
Confidence 653 699999997532 12232 25789999999999999999999999998642 114789999999998
Q ss_pred cCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC---ChHHHHHHHhhhccCCCCCCHHHHH
Q 022386 161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---APEEIRSKATDYMAAYKFGEKWDIA 237 (298)
Q Consensus 161 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~dva 237 (298)
.+.+....|++||+|++.|+++++.|++ +.||+||+|+||+++|++..... ..++..+.+....+.+++.+|+|+|
T Consensus 156 ~~~~~~~~Y~asKaal~~l~~~la~e~~-~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva 234 (256)
T TIGR01500 156 QPFKGWALYCAGKAARDMLFQVLALEEK-NPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAKGKLVDPKVSA 234 (256)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHhc-CCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhcCCCCCHHHHH
Confidence 8888899999999999999999999997 78999999999999988643211 1223344555667888999999999
Q ss_pred HHHHHhcCCCCCCccccEEEe
Q 022386 238 MAALYLASDAGKYVNGNTLIV 258 (298)
Q Consensus 238 ~~~~~L~s~~~~~~~G~~i~~ 258 (298)
+.+++|++ .++++||+.+++
T Consensus 235 ~~~~~l~~-~~~~~~G~~~~~ 254 (256)
T TIGR01500 235 QKLLSLLE-KDKFKSGAHVDY 254 (256)
T ss_pred HHHHHHHh-cCCcCCcceeec
Confidence 99999996 468999998865
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-37 Score=264.01 Aligned_cols=241 Identities=18% Similarity=0.150 Sum_probs=199.9
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCC-CeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
|+++||||++|||+++|++|+ +|++|++++|+.++++++.+++.+.+. .+.+++||++|+++++++++++.+.++++|
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 79 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS 79 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence 589999999999999999999 599999999999999998888877654 478899999999999999999999999999
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHH
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~ 171 (298)
++|||||.....+..+.+.+.+.+++++|+.+++++++.++|.|.++.. +|+||++||..+..+.+....|++
T Consensus 80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~-------~g~Iv~isS~~~~~~~~~~~~Y~a 152 (246)
T PRK05599 80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTA-------PAAIVAFSSIAGWRARRANYVYGS 152 (246)
T ss_pred EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCC-------CCEEEEEeccccccCCcCCcchhh
Confidence 9999999865555556677888899999999999999999999986521 489999999999988888999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCCCCc
Q 022386 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYV 251 (298)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~ 251 (298)
||+|+++|+++++.|++ ++||+||+|+||+++|++..... +.....+|+|+|+.++++++....
T Consensus 153 sKaa~~~~~~~la~el~-~~~I~v~~v~PG~v~T~~~~~~~-------------~~~~~~~pe~~a~~~~~~~~~~~~-- 216 (246)
T PRK05599 153 TKAGLDAFCQGLADSLH-GSHVRLIIARPGFVIGSMTTGMK-------------PAPMSVYPRDVAAAVVSAITSSKR-- 216 (246)
T ss_pred HHHHHHHHHHHHHHHhc-CCCceEEEecCCcccchhhcCCC-------------CCCCCCCHHHHHHHHHHHHhcCCC--
Confidence 99999999999999997 78999999999999987543211 111135899999999999976432
Q ss_pred cccEEEeCCCCCC--CCCCCCchhHHHhh
Q 022386 252 NGNTLIVDGGNWL--SNPRDLPKEAVNQL 278 (298)
Q Consensus 252 ~G~~i~~dgG~~~--~~~~~~~~~~~~~~ 278 (298)
+..+.++++..+ ...+.+|+.++++|
T Consensus 217 -~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 244 (246)
T PRK05599 217 -STTLWIPGRLRVLAWIMRLVPRPIWRKM 244 (246)
T ss_pred -CceEEeCccHHHHHHHHHhCcHHHHHhc
Confidence 455677776533 11235666666554
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-36 Score=258.66 Aligned_cols=243 Identities=31% Similarity=0.440 Sum_probs=209.2
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
+|++++++|||+++|||.++++.|+++|++|++++|+.+++++..+++...+.++.++++|+++.++++++++.+.+.++
T Consensus 2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (253)
T PRK08217 2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFG 81 (253)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 47899999999999999999999999999999999998888888888877777899999999999999999999998889
Q ss_pred CccEEEECCCCCCCCC--------C-CCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 89 KLDILVNAAAGNFLVP--------A-EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 89 ~id~li~~ag~~~~~~--------~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
++|++|||+|...... + .+.+.+.+..++++|+.+++.+++.+.+.|.+... ++.||++||..
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~-------~~~iv~~ss~~- 153 (253)
T PRK08217 82 QLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGS-------KGVIINISSIA- 153 (253)
T ss_pred CCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC-------CeEEEEEcccc-
Confidence 9999999999654322 1 56678999999999999999999999999986531 57899998864
Q ss_pred ccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHH
Q 022386 160 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239 (298)
Q Consensus 160 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (298)
..+.+....|++||++++.++++++.++. ++||++++++||+++|++... ..++..+.+....+.+++.+++|+++.
T Consensus 154 ~~~~~~~~~Y~~sK~a~~~l~~~la~~~~-~~~i~v~~v~pg~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~a~~ 230 (253)
T PRK08217 154 RAGNMGQTNYSASKAGVAAMTVTWAKELA-RYGIRVAAIAPGVIETEMTAA--MKPEALERLEKMIPVGRLGEPEEIAHT 230 (253)
T ss_pred ccCCCCCchhHHHHHHHHHHHHHHHHHHH-HcCcEEEEEeeCCCcCccccc--cCHHHHHHHHhcCCcCCCcCHHHHHHH
Confidence 45667789999999999999999999997 779999999999999886533 234455556666788889999999999
Q ss_pred HHHhcCCCCCCccccEEEeCCCCCC
Q 022386 240 ALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 240 ~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
+.+|++ +.+++|+.|++|||..+
T Consensus 231 ~~~l~~--~~~~~g~~~~~~gg~~~ 253 (253)
T PRK08217 231 VRFIIE--NDYVTGRVLEIDGGLRL 253 (253)
T ss_pred HHHHHc--CCCcCCcEEEeCCCccC
Confidence 999995 36899999999999753
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-37 Score=269.28 Aligned_cols=265 Identities=15% Similarity=0.118 Sum_probs=209.2
Q ss_pred EEecCCchhHHHHHHHHHHcC-CcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEE
Q 022386 16 LLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV 94 (298)
Q Consensus 16 lVtG~t~giG~~ia~~l~~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li 94 (298)
+||||++|||++++++|+++| ++|++++|+.+..++..+++...+.++.+++||+++.++++++++++.+.++++|++|
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI 80 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV 80 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 699999999999999999999 9999999998877777777754456788899999999999999999998889999999
Q ss_pred ECCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC-----------
Q 022386 95 NAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA----------- 162 (298)
Q Consensus 95 ~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~----------- 162 (298)
||||+... .+..+.+.++|+++|++|+.+++++++.++|.|.+++. .+|+||++||..+..+
T Consensus 81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~------~~g~IV~vsS~~~~~~~~~~~~~~~~~ 154 (308)
T PLN00015 81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDY------PSKRLIIVGSITGNTNTLAGNVPPKAN 154 (308)
T ss_pred ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC------CCCEEEEEeccccccccccccCCCccc
Confidence 99997533 35567789999999999999999999999999987531 1378999999876421
Q ss_pred ------------------------CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcc-cCCcccCcCChHHH
Q 022386 163 ------------------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI-KDTAGVSKLAPEEI 217 (298)
Q Consensus 163 ------------------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v-~t~~~~~~~~~~~~ 217 (298)
.....+|++||+|+..+++.+++++....||+|++|+||+| .|++..........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~ 234 (308)
T PLN00015 155 LGDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRL 234 (308)
T ss_pred hhhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHH
Confidence 12457899999999999999999986236999999999999 56664332211110
Q ss_pred HHHHhhhccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCC----CCCCCCCchhHHHhhHHhhhhcc
Q 022386 218 RSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW----LSNPRDLPKEAVNQLSRAVERKS 286 (298)
Q Consensus 218 ~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~----~~~~~~~~~~~~~~~~~~~~~~~ 286 (298)
........+.+++.+|++.|+.+++++++.....+|+.+.++|+.. ...+....+..++++|..+++.+
T Consensus 235 ~~~~~~~~~~~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~~g~~~~~~~~~~~~a~d~~~~~~lw~~~~~~~ 307 (308)
T PLN00015 235 LFPPFQKYITKGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWNGGSASFENQLSQEASDAEKAKKVWEISEKLV 307 (308)
T ss_pred HHHHHHHHHhcccccHHHhhhhhhhhccccccCCCccccccCCcccccccCcChhhcCHHHHHHHHHHHHHhc
Confidence 0011123345667899999999999999877789999999988632 22333455577888998887654
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-37 Score=273.19 Aligned_cols=247 Identities=23% Similarity=0.295 Sum_probs=208.4
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
|++..+++|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++.+.+.++.++.||++|+++++++++.+.
T Consensus 1 ~~~~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~ 80 (334)
T PRK07109 1 MMLKPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAE 80 (334)
T ss_pred CCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 45667899999999999999999999999999999999999988888888888878889999999999999999999999
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~ 164 (298)
+.++++|++|||||.....++.+.+.+++++.+++|+.+++++++.++++|.+++ .|+||++||..++.+.+
T Consensus 81 ~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~--------~g~iV~isS~~~~~~~~ 152 (334)
T PRK07109 81 EELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD--------RGAIIQVGSALAYRSIP 152 (334)
T ss_pred HHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--------CcEEEEeCChhhccCCC
Confidence 9999999999999987777888899999999999999999999999999998865 58999999999998888
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcC-CCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHh
Q 022386 165 YQIHVSAAKAAVDSITRSLALEWGT-DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (298)
Q Consensus 165 ~~~~Y~~sK~a~~~l~~~la~e~~~-~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L 243 (298)
....|++||+++.+|+++++.|+.. ..+|+++.|+||+++|+..... .... .....+...+.+|+|+|+.++++
T Consensus 153 ~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~---~~~~--~~~~~~~~~~~~pe~vA~~i~~~ 227 (334)
T PRK07109 153 LQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWA---RSRL--PVEPQPVPPIYQPEVVADAILYA 227 (334)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhh---hhhc--cccccCCCCCCCHHHHHHHHHHH
Confidence 8999999999999999999999861 2479999999999998753211 0000 01112345678999999999999
Q ss_pred cCCCCC--CccccEEEeCCCCCC
Q 022386 244 ASDAGK--YVNGNTLIVDGGNWL 264 (298)
Q Consensus 244 ~s~~~~--~~~G~~i~~dgG~~~ 264 (298)
++.+.. ++.+..+.++.+..+
T Consensus 228 ~~~~~~~~~vg~~~~~~~~~~~~ 250 (334)
T PRK07109 228 AEHPRRELWVGGPAKAAILGNRL 250 (334)
T ss_pred HhCCCcEEEeCcHHHHHHHHHHh
Confidence 976422 344444444544433
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-37 Score=265.02 Aligned_cols=231 Identities=22% Similarity=0.242 Sum_probs=196.3
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
|.+|+||+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.||++|+++++++++++.+.
T Consensus 1 ~~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 80 (275)
T PRK05876 1 MDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRL 80 (275)
T ss_pred CCCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 45689999999999999999999999999999999999988888888888777778899999999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
++++|++|||||+...+++.+.+.++|++.+++|+.++++++++++|.|.+++. +|+||++||..+..+.+..
T Consensus 81 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~-------~g~iv~isS~~~~~~~~~~ 153 (275)
T PRK05876 81 LGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGT-------GGHVVFTASFAGLVPNAGL 153 (275)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC-------CCEEEEeCChhhccCCCCC
Confidence 999999999999877788888999999999999999999999999999987531 4889999999999998999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC--hHHH-----HHHHhhhccCCCCCCHHHHHHH
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEI-----RSKATDYMAAYKFGEKWDIAMA 239 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~--~~~~-----~~~~~~~~~~~~~~~~~dva~~ 239 (298)
..|++||+++.+|+++++.|+. ++||+|+.|+||+++|++...... .... ............+.+|+|+|+.
T Consensus 154 ~~Y~asK~a~~~~~~~l~~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 232 (275)
T PRK05876 154 GAYGVAKYGVVGLAETLAREVT-ADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQL 232 (275)
T ss_pred chHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHHHHH
Confidence 9999999999999999999997 789999999999999875432110 0000 0000011112346799999999
Q ss_pred HHHhcC
Q 022386 240 ALYLAS 245 (298)
Q Consensus 240 ~~~L~s 245 (298)
++..+.
T Consensus 233 ~~~ai~ 238 (275)
T PRK05876 233 TADAIL 238 (275)
T ss_pred HHHHHH
Confidence 987764
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-36 Score=256.88 Aligned_cols=242 Identities=24% Similarity=0.351 Sum_probs=204.7
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCC-hhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
+.+..+|+++||||++|||++++++|+++|++|+++.++ .+.++.+.+.+...+.++.++.||++|.++++++++++.+
T Consensus 4 ~~~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 83 (258)
T PRK09134 4 MSMAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASA 83 (258)
T ss_pred CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 334678999999999999999999999999999887664 4556667777766677789999999999999999999999
Q ss_pred HhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC
Q 022386 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~ 165 (298)
.++++|++|||||.....++.+.+.++|++++++|+.+++++++++.++|.+.. .++||+++|.....+.+.
T Consensus 84 ~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~~iv~~~s~~~~~~~p~ 155 (258)
T PRK09134 84 ALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADA--------RGLVVNMIDQRVWNLNPD 155 (258)
T ss_pred HcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--------CceEEEECchhhcCCCCC
Confidence 999999999999987767777889999999999999999999999999998754 588999999877777777
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcC
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s 245 (298)
+..|++||++++.+++.++.++. +. |+|++|+||++.|.... ....+ .......+.++..+++|+|++++++++
T Consensus 156 ~~~Y~~sK~a~~~~~~~la~~~~-~~-i~v~~i~PG~v~t~~~~---~~~~~-~~~~~~~~~~~~~~~~d~a~~~~~~~~ 229 (258)
T PRK09134 156 FLSYTLSKAALWTATRTLAQALA-PR-IRVNAIGPGPTLPSGRQ---SPEDF-ARQHAATPLGRGSTPEEIAAAVRYLLD 229 (258)
T ss_pred chHHHHHHHHHHHHHHHHHHHhc-CC-cEEEEeecccccCCccc---ChHHH-HHHHhcCCCCCCcCHHHHHHHHHHHhc
Confidence 78999999999999999999986 54 99999999999875321 11222 223334566778899999999999997
Q ss_pred CCCCCccccEEEeCCCCCC
Q 022386 246 DAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 246 ~~~~~~~G~~i~~dgG~~~ 264 (298)
. .+++|+.+.+|||..+
T Consensus 230 ~--~~~~g~~~~i~gg~~~ 246 (258)
T PRK09134 230 A--PSVTGQMIAVDGGQHL 246 (258)
T ss_pred C--CCcCCCEEEECCCeec
Confidence 4 5789999999999754
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-37 Score=257.44 Aligned_cols=213 Identities=23% Similarity=0.273 Sum_probs=178.4
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l 93 (298)
+++||||++|||+++++.|+++|++|++++|+.+++++..+.+ .+.+++||++++++++++++.+.+ ++|++
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~---~id~l 73 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-----DVDAIVCDNTDPASLEEARGLFPH---HLDTI 73 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCcEEecCCCCHHHHHHHHHHHhh---cCcEE
Confidence 5899999999999999999999999999999987766655544 256788999999999999887653 69999
Q ss_pred EECCCCCCC------CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 94 VNAAAGNFL------VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 94 i~~ag~~~~------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
|||+|.... .++.+ +.++|++.+++|+.++++++++++|.|++ +|+||+++|.. .+...
T Consensus 74 v~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~----------~g~Iv~isS~~----~~~~~ 138 (223)
T PRK05884 74 VNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS----------GGSIISVVPEN----PPAGS 138 (223)
T ss_pred EECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc----------CCeEEEEecCC----CCCcc
Confidence 999985321 12333 46899999999999999999999999964 48899999975 34567
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~ 247 (298)
.|++||+|+.+|+++++.|++ ++|||||+|+||+++|++... . ...| ..+|+|+++.+.||+++.
T Consensus 139 ~Y~asKaal~~~~~~la~e~~-~~gI~v~~v~PG~v~t~~~~~----------~-~~~p---~~~~~~ia~~~~~l~s~~ 203 (223)
T PRK05884 139 AEAAIKAALSNWTAGQAAVFG-TRGITINAVACGRSVQPGYDG----------L-SRTP---PPVAAEIARLALFLTTPA 203 (223)
T ss_pred ccHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecCccCchhhhh----------c-cCCC---CCCHHHHHHHHHHHcCch
Confidence 899999999999999999998 789999999999999874211 0 0122 238999999999999999
Q ss_pred CCCccccEEEeCCCCCC
Q 022386 248 GKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 248 ~~~~~G~~i~~dgG~~~ 264 (298)
+.+++|+.+.+|||..+
T Consensus 204 ~~~v~G~~i~vdgg~~~ 220 (223)
T PRK05884 204 ARHITGQTLHVSHGALA 220 (223)
T ss_pred hhccCCcEEEeCCCeec
Confidence 99999999999999765
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-36 Score=257.15 Aligned_cols=233 Identities=21% Similarity=0.294 Sum_probs=200.9
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCC-CCeEEEEccCCC--HHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVRK--REDAVRVVEST 83 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dls~--~~~~~~~~~~~ 83 (298)
|.+|++|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++.+.+ .++.++.+|+++ .++++++++++
T Consensus 1 ~~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i 80 (239)
T PRK08703 1 MATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATI 80 (239)
T ss_pred CCCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHH
Confidence 456889999999999999999999999999999999999988888877776543 457788999985 67899999999
Q ss_pred HHHh-CCccEEEECCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc
Q 022386 84 INHF-GKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 161 (298)
Q Consensus 84 ~~~~-~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~ 161 (298)
.+.+ +.+|++|||||... ..++.+.+.++|++.+++|+.+++.+++++++.|.+.+ .+++|+++|..+..
T Consensus 81 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~--------~~~iv~~ss~~~~~ 152 (239)
T PRK08703 81 AEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSP--------DASVIFVGESHGET 152 (239)
T ss_pred HHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCC--------CCEEEEEecccccc
Confidence 9888 89999999999753 35777889999999999999999999999999998764 58899999999988
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHhcCCC-CeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHH
Q 022386 162 ATWYQIHVSAAKAAVDSITRSLALEWGTDY-AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240 (298)
Q Consensus 162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~-girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 240 (298)
+.+...+|++||++++.+++.++.|+. ++ +|+|+.|.||+++|++.......+. .....+++|+++.+
T Consensus 153 ~~~~~~~Y~~sKaa~~~~~~~la~e~~-~~~~i~v~~v~pG~v~t~~~~~~~~~~~----------~~~~~~~~~~~~~~ 221 (239)
T PRK08703 153 PKAYWGGFGASKAALNYLCKVAADEWE-RFGNLRANVLVPGPINSPQRIKSHPGEA----------KSERKSYGDVLPAF 221 (239)
T ss_pred CCCCccchHHhHHHHHHHHHHHHHHhc-cCCCeEEEEEecCcccCccccccCCCCC----------ccccCCHHHHHHHH
Confidence 888889999999999999999999997 55 6999999999999986543322111 12356999999999
Q ss_pred HHhcCCCCCCccccEEEe
Q 022386 241 LYLASDAGKYVNGNTLIV 258 (298)
Q Consensus 241 ~~L~s~~~~~~~G~~i~~ 258 (298)
+|++++.+.++||++|.+
T Consensus 222 ~~~~~~~~~~~~g~~~~~ 239 (239)
T PRK08703 222 VWWASAESKGRSGEIVYL 239 (239)
T ss_pred HHHhCccccCcCCeEeeC
Confidence 999999999999999864
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-36 Score=288.71 Aligned_cols=252 Identities=28% Similarity=0.380 Sum_probs=216.2
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC-C-CCeEEEEccCCCHHHHHHHHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-G-IPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~-~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
....|++|+++||||++|||++++++|+++|++|++++|+.+.++...+.+... + .++.+++||++|+++++++++++
T Consensus 408 ~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i 487 (676)
T TIGR02632 408 KEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADV 487 (676)
T ss_pred CCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHH
Confidence 456788999999999999999999999999999999999988777777766542 2 35778999999999999999999
Q ss_pred HHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
.+.|+++|++|||||.....++.+.+.++|+..+++|+.+++++++.+++.|+++.. +++||++||..+..+.
T Consensus 488 ~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~-------~g~IV~iSS~~a~~~~ 560 (676)
T TIGR02632 488 ALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGL-------GGNIVFIASKNAVYAG 560 (676)
T ss_pred HHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-------CCEEEEEeChhhcCCC
Confidence 999999999999999876677888889999999999999999999999999987531 4789999999998888
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCccc--CcC----------ChHHHHHHHhhhccCCCCC
Q 022386 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV--SKL----------APEEIRSKATDYMAAYKFG 231 (298)
Q Consensus 164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~--~~~----------~~~~~~~~~~~~~~~~~~~ 231 (298)
+....|++||++++.++++++.|++ ++|||||+|+||.+.+.... ... ..++.........+++++.
T Consensus 561 ~~~~aY~aSKaA~~~l~r~lA~el~-~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v 639 (676)
T TIGR02632 561 KNASAYSAAKAAEAHLARCLAAEGG-TYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHI 639 (676)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCc
Confidence 8899999999999999999999997 78999999999998643111 110 1222233355667888999
Q ss_pred CHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 232 EKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 232 ~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
+|+|+|+++.||+++...++||+.+.+|||....
T Consensus 640 ~peDVA~av~~L~s~~~~~~TG~~i~vDGG~~~~ 673 (676)
T TIGR02632 640 FPADIAEAVFFLASSKSEKTTGCIITVDGGVPAA 673 (676)
T ss_pred CHHHHHHHHHHHhCCcccCCcCcEEEECCCchhc
Confidence 9999999999999988889999999999997654
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-36 Score=255.55 Aligned_cols=242 Identities=29% Similarity=0.447 Sum_probs=207.7
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCC----hhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR----KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
.+|++++++||||++|||+++++.|+++|++|++++|. .+..++..+++...+.++.++.||+++.++++++++.+
T Consensus 2 ~~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 81 (249)
T PRK12827 2 ASLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAG 81 (249)
T ss_pred CCcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence 45778999999999999999999999999999987653 44455555666666778899999999999999999999
Q ss_pred HHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHH-HHHHhcCCCCCCCCCCcEEEEecccccccC
Q 022386 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL-KYLKKGGRGQASSSSGGIIINISATLHYTA 162 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~~~~~~~~~~~~~~~g~iv~vss~~~~~~ 162 (298)
.+.++++|++|||+|.....++.+.+.++|++.+++|+.+++.+++++. +.++++. .+++|++||..+..+
T Consensus 82 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--------~~~iv~~sS~~~~~~ 153 (249)
T PRK12827 82 VEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARR--------GGRIVNIASVAGVRG 153 (249)
T ss_pred HHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCC--------CeEEEEECCchhcCC
Confidence 9999999999999998777778888999999999999999999999999 6665543 578999999999888
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHH
Q 022386 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (298)
Q Consensus 163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 242 (298)
.++...|+.+|++++.++++++.++. +.||+++.|+||+++|+........ .......+...+.+++|+++.+.+
T Consensus 154 ~~~~~~y~~sK~a~~~~~~~l~~~~~-~~~i~~~~i~pg~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~va~~~~~ 228 (249)
T PRK12827 154 NRGQVNYAASKAGLIGLTKTLANELA-PRGITVNAVAPGAINTPMADNAAPT----EHLLNPVPVQRLGEPDEVAALVAF 228 (249)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHhh-hhCcEEEEEEECCcCCCcccccchH----HHHHhhCCCcCCcCHHHHHHHHHH
Confidence 88899999999999999999999987 7799999999999998754332211 233344566677899999999999
Q ss_pred hcCCCCCCccccEEEeCCCC
Q 022386 243 LASDAGKYVNGNTLIVDGGN 262 (298)
Q Consensus 243 L~s~~~~~~~G~~i~~dgG~ 262 (298)
|+++....++|+++.+|||.
T Consensus 229 l~~~~~~~~~g~~~~~~~g~ 248 (249)
T PRK12827 229 LVSDAASYVTGQVIPVDGGF 248 (249)
T ss_pred HcCcccCCccCcEEEeCCCC
Confidence 99888889999999999985
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-36 Score=255.55 Aligned_cols=240 Identities=29% Similarity=0.380 Sum_probs=204.5
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
.++++|+++|||++++||+++++.|+++|++|++++|+.+..++..+.. ...++.+|++++++++++++. +
T Consensus 5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~----~ 75 (245)
T PRK07060 5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-----GCEPLRLDVGDDAAIRAALAA----A 75 (245)
T ss_pred cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCeEEEecCCCHHHHHHHHHH----h
Confidence 3578999999999999999999999999999999999976655544432 256788999999988888765 5
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
+++|++|||+|.....+..+.+.+++++.+++|+.+++.+++++++.+.+... .++||++||..+..+.+...
T Consensus 76 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~ 148 (245)
T PRK07060 76 GAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGR-------GGSIVNVSSQAALVGLPDHL 148 (245)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC-------CcEEEEEccHHHcCCCCCCc
Confidence 78999999999877677777888999999999999999999999999875421 37899999999888888889
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~ 247 (298)
.|+.+|++++.+++.++.++. ++||+++++.||+++|+.....+..+..........+.+++.+++|+++++.+++++.
T Consensus 149 ~y~~sK~a~~~~~~~~a~~~~-~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~ 227 (245)
T PRK07060 149 AYCASKAALDAITRVLCVELG-PHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDA 227 (245)
T ss_pred HhHHHHHHHHHHHHHHHHHHh-hhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc
Confidence 999999999999999999997 7799999999999998865443333333344445567788999999999999999988
Q ss_pred CCCccccEEEeCCCCCC
Q 022386 248 GKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 248 ~~~~~G~~i~~dgG~~~ 264 (298)
+.+++|+.|.+|||..+
T Consensus 228 ~~~~~G~~~~~~~g~~~ 244 (245)
T PRK07060 228 ASMVSGVSLPVDGGYTA 244 (245)
T ss_pred cCCccCcEEeECCCccC
Confidence 89999999999999754
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=254.12 Aligned_cols=244 Identities=33% Similarity=0.481 Sum_probs=213.9
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEE-cCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
+|.+|+++||||+++||.+++++|+++|++|+++ +|+.+..++..+.+...+.++.++.+|++++++++++++.+.+.+
T Consensus 2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (247)
T PRK05565 2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF 81 (247)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 5788999999999999999999999999999998 998887777777777666778999999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
+++|++||++|.....++.+.+.+++++.+++|+.+++.+++.+.+.+.+++ .+++|++||..+..+.+...
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~~~v~~sS~~~~~~~~~~~ 153 (247)
T PRK05565 82 GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRK--------SGVIVNISSIWGLIGASCEV 153 (247)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--------CcEEEEECCHhhccCCCCcc
Confidence 9999999999987666777888999999999999999999999999998765 58899999999888888889
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~ 247 (298)
.|+.+|++++.+++.++.++. +.||++++++||+++|+...... +. .........+..++.+++++++.+.+|+++.
T Consensus 154 ~y~~sK~a~~~~~~~~~~~~~-~~gi~~~~v~pg~v~t~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~ 230 (247)
T PRK05565 154 LYSASKGAVNAFTKALAKELA-PSGIRVNAVAPGAIDTEMWSSFS-EE-DKEGLAEEIPLGRLGKPEEIAKVVLFLASDD 230 (247)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HcCeEEEEEEECCccCccccccC-hH-HHHHHHhcCCCCCCCCHHHHHHHHHHHcCCc
Confidence 999999999999999999997 77999999999999887543322 22 2222223456677889999999999999998
Q ss_pred CCCccccEEEeCCCCC
Q 022386 248 GKYVNGNTLIVDGGNW 263 (298)
Q Consensus 248 ~~~~~G~~i~~dgG~~ 263 (298)
...++|+.+.+|+|+.
T Consensus 231 ~~~~~g~~~~~~~~~~ 246 (247)
T PRK05565 231 ASYITGQIITVDGGWT 246 (247)
T ss_pred cCCccCcEEEecCCcc
Confidence 8999999999999964
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=254.42 Aligned_cols=248 Identities=32% Similarity=0.439 Sum_probs=216.7
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
.++++|+++||||+++||++++++|+++|++|++++|+.+...+..+.+...+.++.++.+|++|.++++++++++.+.+
T Consensus 2 ~~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (251)
T PRK12826 2 RDLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDF 81 (251)
T ss_pred CCCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 35678999999999999999999999999999999999887777777787777778999999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc-cCCCCc
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQ 166 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~-~~~~~~ 166 (298)
+++|++||++|.....++.+.+.+++++.++.|+.+++.+++.+++.|.+++ .++||++||..+. .+.+..
T Consensus 82 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~~ii~~ss~~~~~~~~~~~ 153 (251)
T PRK12826 82 GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG--------GGRIVLTSSVAGPRVGYPGL 153 (251)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--------CcEEEEEechHhhccCCCCc
Confidence 9999999999987767777788999999999999999999999999998765 5789999999887 777888
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
..|+.+|++++.+++.++.++. +.|++++.+.||.++++...... .......+....+.+++.+++|+++++.++++.
T Consensus 154 ~~y~~sK~a~~~~~~~~~~~~~-~~~i~~~~i~pg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 231 (251)
T PRK12826 154 AHYAASKAGLVGFTRALALELA-ARNITVNSVHPGGVDTPMAGNLG-DAQWAEAIAAAIPLGRLGEPEDIAAAVLFLASD 231 (251)
T ss_pred cHHHHHHHHHHHHHHHHHHHHH-HcCeEEEEEeeCCCCcchhhhcC-chHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 8999999999999999999997 67999999999999987643322 222123344456777889999999999999988
Q ss_pred CCCCccccEEEeCCCCCCC
Q 022386 247 AGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 247 ~~~~~~G~~i~~dgG~~~~ 265 (298)
...+++|+.+.+|||..+.
T Consensus 232 ~~~~~~g~~~~~~~g~~~~ 250 (251)
T PRK12826 232 EARYITGQTLPVDGGATLP 250 (251)
T ss_pred cccCcCCcEEEECCCccCC
Confidence 7788999999999997763
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=251.97 Aligned_cols=245 Identities=33% Similarity=0.435 Sum_probs=212.6
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh-HHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
+|++|+++|||++++||++++++|+++|++|+++.|+.. ..+...+++...+.++.++.+|+++.+++.++++++.+.+
T Consensus 2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (248)
T PRK05557 2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEF 81 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 578899999999999999999999999999988887754 3556666666667788999999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
+++|++||++|.....+..+.+.+.+++.+++|+.+++.+.+++.+.+.+.+ .+++|++||..+..+.+...
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~~~v~iss~~~~~~~~~~~ 153 (248)
T PRK05557 82 GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQR--------SGRIINISSVVGLMGNPGQA 153 (248)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--------CeEEEEEcccccCcCCCCCc
Confidence 9999999999987767777788999999999999999999999999998754 57899999998888888889
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~ 247 (298)
.|+.+|++++.+++.++.++. ..||+++.++||+++++..... .+..........+.+++.+++|+++.+.+|+.+.
T Consensus 154 ~y~~sk~a~~~~~~~~a~~~~-~~~i~~~~v~pg~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~ 230 (248)
T PRK05557 154 NYAASKAGVIGFTKSLARELA-SRGITVNAVAPGFIETDMTDAL--PEDVKEAILAQIPLGRLGQPEEIASAVAFLASDE 230 (248)
T ss_pred hhHHHHHHHHHHHHHHHHHhh-hhCeEEEEEecCccCCcccccc--ChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence 999999999999999999987 7799999999999987654332 2333444455567778899999999999999887
Q ss_pred CCCccccEEEeCCCCCC
Q 022386 248 GKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 248 ~~~~~G~~i~~dgG~~~ 264 (298)
+.+++|+.+++|||.++
T Consensus 231 ~~~~~g~~~~i~~~~~~ 247 (248)
T PRK05557 231 AAYITGQTLHVNGGMVM 247 (248)
T ss_pred cCCccccEEEecCCccC
Confidence 88999999999999765
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=254.66 Aligned_cols=242 Identities=25% Similarity=0.353 Sum_probs=207.8
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
+|+++||||+++||++++++|+++|++|++++|+.+..+...+.+. +.++.++.+|+++.+++.++++++.+.++++|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 79 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG--DARFVPVACDLTDAASLAAALANAAAERGPVD 79 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 5899999999999999999999999999999999887777766663 34688899999999999999999999999999
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHH
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~ 171 (298)
++||++|.....++.+.+.++|...+++|+.+++.+.+++++.+.+++ .++||++||..+... .+...|+.
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--------~~~iv~~sS~~~~~~-~~~~~y~~ 150 (257)
T PRK07074 80 VLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRS--------RGAVVNIGSVNGMAA-LGHPAYSA 150 (257)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--------CeEEEEEcchhhcCC-CCCcccHH
Confidence 999999987666777788999999999999999999999999998765 578999999766533 35678999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC-hHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCCCC
Q 022386 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKY 250 (298)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~ 250 (298)
+|++++.++++++.+++ ++||+|+.+.||+++|+....... .++.........+.+++.+++|+++++.+|+++...+
T Consensus 151 sK~a~~~~~~~~a~~~~-~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~ 229 (257)
T PRK07074 151 AKAGLIHYTKLLAVEYG-RFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLASPAARA 229 (257)
T ss_pred HHHHHHHHHHHHHHHHh-HhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcC
Confidence 99999999999999997 789999999999999876433221 2333333444567788999999999999999988889
Q ss_pred ccccEEEeCCCCCCC
Q 022386 251 VNGNTLIVDGGNWLS 265 (298)
Q Consensus 251 ~~G~~i~~dgG~~~~ 265 (298)
++|+.+.+|+|....
T Consensus 230 ~~g~~~~~~~g~~~~ 244 (257)
T PRK07074 230 ITGVCLPVDGGLTAG 244 (257)
T ss_pred cCCcEEEeCCCcCcC
Confidence 999999999997664
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=255.11 Aligned_cols=248 Identities=25% Similarity=0.324 Sum_probs=207.7
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh-hHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|+++||||++|||.++++.|+++|++|++++|+. +..++..+.+...+.++.++.+|+++++++.++++.+.+.++++
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI 81 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 48999999999999999999999999999999864 44555666666666778999999999999999999999999999
Q ss_pred cEEEECCCCCC--CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchh
Q 022386 91 DILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (298)
Q Consensus 91 d~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~ 168 (298)
|++|||||... ..++.+.+.++|++.+++|+.+++.+++++.+.|.++..+. ....++||++||..+..+.+....
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~--~~~~~~iv~~sS~~~~~~~~~~~~ 159 (256)
T PRK12745 82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPE--ELPHRSIVFVSSVNAIMVSPNRGE 159 (256)
T ss_pred CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcC--CCCCcEEEEECChhhccCCCCCcc
Confidence 99999999743 35567788899999999999999999999999998764210 011367999999999888888899
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHh-hhccCCCCCCHHHHHHHHHHhcCCC
Q 022386 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT-DYMAAYKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 169 Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dva~~~~~L~s~~ 247 (298)
|+.||++++.+++.++.|+. ++||+++.|+||++.|++..... +.....+. ...+..++.+++|+++++.+++++.
T Consensus 160 Y~~sK~a~~~~~~~l~~~~~-~~gi~v~~i~pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~a~~i~~l~~~~ 236 (256)
T PRK12745 160 YCISKAGLSMAAQLFAARLA-EEGIGVYEVRPGLIKTDMTAPVT--AKYDALIAKGLVPMPRWGEPEDVARAVAALASGD 236 (256)
T ss_pred cHHHHHHHHHHHHHHHHHHH-HhCCEEEEEecCCCcCccccccc--hhHHhhhhhcCCCcCCCcCHHHHHHHHHHHhCCc
Confidence 99999999999999999997 77999999999999987643321 22222221 2456778899999999999999988
Q ss_pred CCCccccEEEeCCCCCC
Q 022386 248 GKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 248 ~~~~~G~~i~~dgG~~~ 264 (298)
..+++|+.+++|||..+
T Consensus 237 ~~~~~G~~~~i~gg~~~ 253 (256)
T PRK12745 237 LPYSTGQAIHVDGGLSI 253 (256)
T ss_pred ccccCCCEEEECCCeec
Confidence 88999999999999775
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-35 Score=260.43 Aligned_cols=266 Identities=21% Similarity=0.214 Sum_probs=203.6
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
+..+|++|+++||||++|||+++++.|+++|++|++++|+.+..++..+++. ++.++.+|++|.++++++++++.+
T Consensus 20 ~~~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~----~v~~~~~Dl~d~~~v~~~~~~~~~ 95 (315)
T PRK06196 20 AGHDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID----GVEVVMLDLADLESVRAFAERFLD 95 (315)
T ss_pred cCCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh----hCeEEEccCCCHHHHHHHHHHHHh
Confidence 3456789999999999999999999999999999999999887777666653 277899999999999999999999
Q ss_pred HhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc----
Q 022386 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT---- 161 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~---- 161 (298)
.++++|++|||||+... ..+.+.++|+..+++|+.++++++++++|.|.+++ .++||++||..+..
T Consensus 96 ~~~~iD~li~nAg~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~--------~~~iV~vSS~~~~~~~~~ 165 (315)
T PRK06196 96 SGRRIDILINNAGVMAC--PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA--------GARVVALSSAGHRRSPIR 165 (315)
T ss_pred cCCCCCEEEECCCCCCC--CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC--------CCeEEEECCHHhccCCCC
Confidence 99999999999997532 23456688999999999999999999999998764 57899999976532
Q ss_pred --------CCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHH--HHhh-hccCC-C
Q 022386 162 --------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS--KATD-YMAAY-K 229 (298)
Q Consensus 162 --------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~--~~~~-~~~~~-~ 229 (298)
+.+....|+.||+++..+++.++.++. ++||+|++|+||+++|++.... ...+... .... ..+.. +
T Consensus 166 ~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~-~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 243 (315)
T PRK06196 166 WDDPHFTRGYDKWLAYGQSKTANALFAVHLDKLGK-DQGVRAFSVHPGGILTPLQRHL-PREEQVALGWVDEHGNPIDPG 243 (315)
T ss_pred ccccCccCCCChHHHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEeeCCcccCCccccC-Chhhhhhhhhhhhhhhhhhhh
Confidence 233457899999999999999999997 7899999999999998865332 2111111 1110 11222 4
Q ss_pred CCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC----------CCCCCchhHHHhhHHhhhhccC
Q 022386 230 FGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS----------NPRDLPKEAVNQLSRAVERKSR 287 (298)
Q Consensus 230 ~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~----------~~~~~~~~~~~~~~~~~~~~~~ 287 (298)
+.+|+++|..++||++.+....+|..+..|.+.... .+.....+..++||..+.+..+
T Consensus 244 ~~~~~~~a~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~lW~~s~~~~~ 311 (315)
T PRK06196 244 FKTPAQGAATQVWAATSPQLAGMGGLYCEDCDIAEPTPKDAPWSGVRPHAIDPEAAARLWALSAALTG 311 (315)
T ss_pred cCCHhHHHHHHHHHhcCCccCCCCCeEeCCCcccccCCcccccCCCCcccCCHHHHHHHHHHHHHHHC
Confidence 789999999999999765443444455445432211 1122355678888888776653
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-35 Score=248.18 Aligned_cols=244 Identities=34% Similarity=0.452 Sum_probs=214.6
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
+|.+|+++||||+++||++++++|+++|++|++++|+.+..+.....+...+.++.++.||+++++++.++++++.+.++
T Consensus 2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK05653 2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFG 81 (246)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 56789999999999999999999999999999999998888777777877778899999999999999999999999899
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchh
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~ 168 (298)
++|++||++|.....+..+.+.+++++.++.|+.+++++++.+.+++.+.+ .++||++||..+..+......
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--------~~~ii~~ss~~~~~~~~~~~~ 153 (246)
T PRK05653 82 ALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR--------YGRIVNISSVSGVTGNPGQTN 153 (246)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--------CcEEEEECcHHhccCCCCCcH
Confidence 999999999987667777788999999999999999999999999997754 578999999988888888889
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCC
Q 022386 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (298)
Q Consensus 169 Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~ 248 (298)
|+.+|++++.+++.+++++. +.|++++.++||.+.++.... ......+......+.+.+.+++|+++.+.+++++..
T Consensus 154 y~~sk~~~~~~~~~l~~~~~-~~~i~~~~i~pg~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~ 230 (246)
T PRK05653 154 YSAAKAGVIGFTKALALELA-SRGITVNAVAPGFIDTDMTEG--LPEEVKAEILKEIPLGRLGQPEEVANAVAFLASDAA 230 (246)
T ss_pred hHhHHHHHHHHHHHHHHHHh-hcCeEEEEEEeCCcCCcchhh--hhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchh
Confidence 99999999999999999986 779999999999998775422 122333344455677788999999999999998878
Q ss_pred CCccccEEEeCCCCC
Q 022386 249 KYVNGNTLIVDGGNW 263 (298)
Q Consensus 249 ~~~~G~~i~~dgG~~ 263 (298)
.+++|+.+.++||..
T Consensus 231 ~~~~g~~~~~~gg~~ 245 (246)
T PRK05653 231 SYITGQVIPVNGGMY 245 (246)
T ss_pred cCccCCEEEeCCCee
Confidence 899999999999975
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=255.01 Aligned_cols=243 Identities=19% Similarity=0.249 Sum_probs=205.9
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCC-eEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP-AIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~-~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.+ +.++.||++++++++++++++.+.++++|
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD 80 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 58999999999999999999999999999999988888887777765544 45678999999999999999999999999
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHH
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~ 171 (298)
++|||+|.....++.+.+.++|+..+++|+.+++.++++++|.|.+.+. .|+||++||..+..+.+....|++
T Consensus 81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-------~g~ii~isS~~~~~~~~~~~~Y~~ 153 (272)
T PRK07832 81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGR-------GGHLVNVSSAAGLVALPWHAAYSA 153 (272)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC-------CcEEEEEccccccCCCCCCcchHH
Confidence 9999999877777888899999999999999999999999999976431 478999999988888888899999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC-----hHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
+|+++.+++++++.|+. ++||+|+.|+||+++|+....... .++........ ..++..+|+|+|+.+++++.
T Consensus 154 sK~a~~~~~~~l~~e~~-~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~vA~~~~~~~~- 230 (272)
T PRK07832 154 SKFGLRGLSEVLRFDLA-RHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDR-FRGHAVTPEKAAEKILAGVE- 230 (272)
T ss_pred HHHHHHHHHHHHHHHhh-hcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHh-cccCCCCHHHHHHHHHHHHh-
Confidence 99999999999999997 789999999999999886443210 11111222222 23457899999999999995
Q ss_pred CCCCccccEEEeCCCCCCC
Q 022386 247 AGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 247 ~~~~~~G~~i~~dgG~~~~ 265 (298)
..++++++.+.+++|.++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~ 249 (272)
T PRK07832 231 KNRYLVYTSPDIRALYWFK 249 (272)
T ss_pred cCCeEEecCcchHHHHHHH
Confidence 4578999999999998775
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-35 Score=248.30 Aligned_cols=243 Identities=27% Similarity=0.386 Sum_probs=206.8
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEE-EcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
|+++||||+++||++++++|+++|++|++ ..|+.+..++...++...+.++.+++||++|+++++++++.+.+.++++|
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id 81 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA 81 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence 68999999999999999999999999877 46777777777777776677788999999999999999999999999999
Q ss_pred EEEECCCCC-CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC-chhh
Q 022386 92 ILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIHV 169 (298)
Q Consensus 92 ~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~-~~~Y 169 (298)
++|||+|.. ...+..+.+.++|+..+++|+.+++.+++.+++.+.++.. ..+|+||++||..+..+.+. ...|
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-----~~~g~~v~~sS~~~~~~~~~~~~~Y 156 (247)
T PRK09730 82 ALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHG-----GSGGAIVNVSSAASRLGAPGEYVDY 156 (247)
T ss_pred EEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC-----CCCcEEEEECchhhccCCCCcccch
Confidence 999999975 4456677888999999999999999999999999987532 11578999999988777665 4689
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCCC
Q 022386 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK 249 (298)
Q Consensus 170 ~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~ 249 (298)
+++|++++.+++.++.|+. +.||+++++.||+++|+..... ..+..........+..+..+++|+++.+.+++++...
T Consensus 157 ~~sK~~~~~~~~~l~~~~~-~~~i~v~~i~pg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~ 234 (247)
T PRK09730 157 AASKGAIDTLTTGLSLEVA-AQGIRVNCVRPGFIYTEMHASG-GEPGRVDRVKSNIPMQRGGQPEEVAQAIVWLLSDKAS 234 (247)
T ss_pred HhHHHHHHHHHHHHHHHHH-HhCeEEEEEEeCCCcCcccccC-CCHHHHHHHHhcCCCCCCcCHHHHHHHHHhhcChhhc
Confidence 9999999999999999987 7799999999999998854332 2233344445556777788999999999999998888
Q ss_pred CccccEEEeCCCC
Q 022386 250 YVNGNTLIVDGGN 262 (298)
Q Consensus 250 ~~~G~~i~~dgG~ 262 (298)
+++|+.+.+|||.
T Consensus 235 ~~~g~~~~~~g~~ 247 (247)
T PRK09730 235 YVTGSFIDLAGGK 247 (247)
T ss_pred CccCcEEecCCCC
Confidence 9999999999974
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-37 Score=244.73 Aligned_cols=234 Identities=26% Similarity=0.317 Sum_probs=196.3
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC--CCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
+++.||.+++||+.+|||++++++|+++|..+.++..+.+..+.. +.+++. ...+.|++||+++..+++++++++..
T Consensus 1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~-akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~ 79 (261)
T KOG4169|consen 1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAI-AKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILA 79 (261)
T ss_pred CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHH-HHHhccCCCceEEEEEeccccHHHHHHHHHHHHH
Confidence 368899999999999999999999999999988888887765444 445443 34688999999999999999999999
Q ss_pred HhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC
Q 022386 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~ 165 (298)
.||.+|++||+||+.. ..+|+.++.+|+.|..+-+...+|+|.++..+ ++|.|||+||..+..|.|.
T Consensus 80 ~fg~iDIlINgAGi~~--------dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG-----~GGiIvNmsSv~GL~P~p~ 146 (261)
T KOG4169|consen 80 TFGTIDILINGAGILD--------DKDWERTINVNLTGVINGTQLALPYMDKKQGG-----KGGIIVNMSSVAGLDPMPV 146 (261)
T ss_pred HhCceEEEEccccccc--------chhHHHhhccchhhhhhhhhhhhhhhhhhcCC-----CCcEEEEeccccccCcccc
Confidence 9999999999999753 46699999999999999999999999987633 3899999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEeCCcccCCcccCc------C-ChHHHHHHHhhhccCCCCCCHHHHH
Q 022386 166 QIHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSK------L-APEEIRSKATDYMAAYKFGEKWDIA 237 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~-~~~girv~~i~PG~v~t~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~dva 237 (298)
.+.|++||+++.+|+|+++.... ...||++++++||++.|++.... + ..+...+.+.. ..-.+|.+++
T Consensus 147 ~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~----~~~q~~~~~a 222 (261)
T KOG4169|consen 147 FPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALER----APKQSPACCA 222 (261)
T ss_pred chhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHH----cccCCHHHHH
Confidence 99999999999999999998753 35699999999999998754332 1 11222222222 2256889999
Q ss_pred HHHHHhcCCCCCCccccEEEeCCCC
Q 022386 238 MAALYLASDAGKYVNGNTLIVDGGN 262 (298)
Q Consensus 238 ~~~~~L~s~~~~~~~G~~i~~dgG~ 262 (298)
+.++..+.. ..+|+.+.+|.|.
T Consensus 223 ~~~v~aiE~---~~NGaiw~v~~g~ 244 (261)
T KOG4169|consen 223 INIVNAIEY---PKNGAIWKVDSGS 244 (261)
T ss_pred HHHHHHHhh---ccCCcEEEEecCc
Confidence 999998865 5789999999997
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=256.49 Aligned_cols=269 Identities=15% Similarity=0.110 Sum_probs=204.7
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcC-CcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
.+|+++||||++|||+++++.|+++| ++|++++|+.+..++..+++...+.++.++.||+++.++++++++++.+.+++
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 81 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP 81 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 47899999999999999999999999 99999999988887777777544566888999999999999999999888899
Q ss_pred ccEEEECCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC------
Q 022386 90 LDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA------ 162 (298)
Q Consensus 90 id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~------ 162 (298)
+|++|||||+... .+..+.+.++|+.++++|+.+++++++.++|.|+++.. ..|+||++||..+...
T Consensus 82 iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~------~~g~IV~vsS~~~~~~~~~~~~ 155 (314)
T TIGR01289 82 LDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPN------KDKRLIIVGSITGNTNTLAGNV 155 (314)
T ss_pred CCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCC------CCCeEEEEecCccccccCCCcC
Confidence 9999999997532 23345688999999999999999999999999986531 1379999999876421
Q ss_pred ---------------------------CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcc-cCCcccCcCCh
Q 022386 163 ---------------------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI-KDTAGVSKLAP 214 (298)
Q Consensus 163 ---------------------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v-~t~~~~~~~~~ 214 (298)
..++.+|++||+|+..+++.+++++..+.||+|++|+||+| .|++.......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~ 235 (314)
T TIGR01289 156 PPKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPL 235 (314)
T ss_pred CCcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHH
Confidence 12457899999999999999999984246899999999999 57765332111
Q ss_pred -HHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCC----CCCCCCCchhHHHhhHHhhhhcc
Q 022386 215 -EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW----LSNPRDLPKEAVNQLSRAVERKS 286 (298)
Q Consensus 215 -~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~----~~~~~~~~~~~~~~~~~~~~~~~ 286 (298)
......+. ....+.+.++++.++.+.+++.+.....+|..+..++..- -...........+++|..+++.+
T Consensus 236 ~~~~~~~~~-~~~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~ 311 (314)
T TIGR01289 236 FRTLFPPFQ-KYITKGYVSEEEAGERLAQVVSDPKLKKSGVYWSWGNRQESFVNQLSEEVSDDSKASKMWDLSEKLV 311 (314)
T ss_pred HHHHHHHHH-HHHhccccchhhhhhhhHHhhcCcccCCCceeeecCCcccccccCCChhhcCHHHHHHHHHHHHHHh
Confidence 01111111 1123346799999999999887654445788776544311 12222345567888888887765
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=255.86 Aligned_cols=273 Identities=18% Similarity=0.183 Sum_probs=206.6
Q ss_pred CCCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC--CCCeEEEEccCCCHHHHHHHHH
Q 022386 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVE 81 (298)
Q Consensus 4 ~~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~ 81 (298)
+.++.+|+||+++||||++|||+++|++|+++|++|++++|+.++.++..+++... +.++.++.||++|.++++++++
T Consensus 6 ~~~~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~ 85 (313)
T PRK05854 6 DITVPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGE 85 (313)
T ss_pred cccCcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHH
Confidence 45567899999999999999999999999999999999999998888888887654 3468899999999999999999
Q ss_pred HHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc
Q 022386 82 STINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 161 (298)
Q Consensus 82 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~ 161 (298)
++.+.++++|++|||||+... +..+.+.++++.+|++|+.+++++++.++|.|++. .++||++||..+..
T Consensus 86 ~~~~~~~~iD~li~nAG~~~~-~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~---------~~riv~vsS~~~~~ 155 (313)
T PRK05854 86 QLRAEGRPIHLLINNAGVMTP-PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG---------RARVTSQSSIAARR 155 (313)
T ss_pred HHHHhCCCccEEEECCccccC-CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC---------CCCeEEEechhhcC
Confidence 999999999999999997543 23356778999999999999999999999999764 37899999987654
Q ss_pred C------------CCCchhhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEeCCcccCCcccCcCC----hHHHHHHHhhh
Q 022386 162 A------------TWYQIHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKLA----PEEIRSKATDY 224 (298)
Q Consensus 162 ~------------~~~~~~Y~~sK~a~~~l~~~la~e~~-~~~girv~~i~PG~v~t~~~~~~~~----~~~~~~~~~~~ 224 (298)
+ ++....|+.||+|+..+++.++.++. ...||+||+++||++.|++...... .......+...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~ 235 (313)
T PRK05854 156 GAINWDDLNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRS 235 (313)
T ss_pred CCcCcccccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHH
Confidence 3 24467899999999999999998642 1568999999999999886532110 01111111111
Q ss_pred cc--CCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCC-----CC---CCCCCCchhHHHhhHHhhhhccC
Q 022386 225 MA--AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN-----WL---SNPRDLPKEAVNQLSRAVERKSR 287 (298)
Q Consensus 225 ~~--~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~-----~~---~~~~~~~~~~~~~~~~~~~~~~~ 287 (298)
.. ...+.++++.+...++++.++.. .+|..+.-.+.. .. ..+....+...+++|..+++..+
T Consensus 236 ~~~~~~~~~~~~~ga~~~l~~a~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~lw~~s~~~~~ 307 (313)
T PRK05854 236 LSARGFLVGTVESAILPALYAATSPDA-EGGAFYGPRGPGELGGGPVEQALYPPLRRNAEAARLWEVSEQLTG 307 (313)
T ss_pred HhhcccccCCHHHHHHHhhheeeCCCC-CCCcEECCCcccccCCCcccCCCCcccCCHHHHHHHHHHHHHHHC
Confidence 10 11246889999999988865422 247666543311 11 11123455678888888877765
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-35 Score=247.02 Aligned_cols=232 Identities=25% Similarity=0.355 Sum_probs=196.9
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
|.+|+++||||+++||++++++|+++|++|++++|+.+. .. ...++.+|+++.++++++++++.+.+ +
T Consensus 1 ~~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~---------~~--~~~~~~~D~~~~~~~~~~~~~~~~~~-~ 68 (234)
T PRK07577 1 MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID---------DF--PGELFACDLADIEQTAATLAQINEIH-P 68 (234)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc---------cc--CceEEEeeCCCHHHHHHHHHHHHHhC-C
Confidence 457999999999999999999999999999999998653 01 12468899999999999999998876 6
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhh
Q 022386 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 169 (298)
Q Consensus 90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y 169 (298)
+|++|||+|.....++.+.+.+++++.+++|+.+++.+.+.++|.|++.+ .++||++||... .+.+....|
T Consensus 69 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~-~~~~~~~~Y 139 (234)
T PRK07577 69 VDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE--------QGRIVNICSRAI-FGALDRTSY 139 (234)
T ss_pred CcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--------CcEEEEEccccc-cCCCCchHH
Confidence 89999999987777777788999999999999999999999999998765 578999999853 466778899
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC-hHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCC
Q 022386 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (298)
Q Consensus 170 ~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~ 248 (298)
+++|++++.++++++.|++ +.||++++|+||+++|++...... .++.........+..+..+|+|+++.+.+|++++.
T Consensus 140 ~~sK~a~~~~~~~~a~e~~-~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~ 218 (234)
T PRK07577 140 SAAKSALVGCTRTWALELA-EYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAFLLSDDA 218 (234)
T ss_pred HHHHHHHHHHHHHHHHHHH-hhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence 9999999999999999997 779999999999999886543221 12222233345567778899999999999999888
Q ss_pred CCccccEEEeCCCCC
Q 022386 249 KYVNGNTLIVDGGNW 263 (298)
Q Consensus 249 ~~~~G~~i~~dgG~~ 263 (298)
.+++|+.+.+|||..
T Consensus 219 ~~~~g~~~~~~g~~~ 233 (234)
T PRK07577 219 GFITGQVLGVDGGGS 233 (234)
T ss_pred CCccceEEEecCCcc
Confidence 899999999999965
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=248.36 Aligned_cols=244 Identities=28% Similarity=0.383 Sum_probs=203.8
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCC-hhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
+++++++++||||+++||++++++|+++|++|++..++ .+......+.+...+.++.++.+|+++++++.++++++.+.
T Consensus 2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (252)
T PRK06077 2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDR 81 (252)
T ss_pred CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHH
Confidence 45789999999999999999999999999998877654 44555555666666667888999999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
++++|++|||||.....+..+.+.+.+++.+++|+.+++.+++++.++|++ .++||++||..++.+.++.
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~----------~~~iv~~sS~~~~~~~~~~ 151 (252)
T PRK06077 82 YGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE----------GGAIVNIASVAGIRPAYGL 151 (252)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc----------CcEEEEEcchhccCCCCCc
Confidence 999999999999876677777888999999999999999999999999965 3789999999999888889
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC--hHHHHHHHhhhccCCCCCCHHHHHHHHHHhc
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~ 244 (298)
..|++||++++.+++.++.|++ + +|+++.+.||+++|+....... ............+.+++.+++|+++.+++++
T Consensus 152 ~~Y~~sK~~~~~~~~~l~~~~~-~-~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~ 229 (252)
T PRK06077 152 SIYGAMKAAVINLTKYLALELA-P-KIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAIL 229 (252)
T ss_pred hHHHHHHHHHHHHHHHHHHHHh-c-CCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHHHHHh
Confidence 9999999999999999999997 6 8999999999999875422110 0000011112334567899999999999999
Q ss_pred CCCCCCccccEEEeCCCCCCC
Q 022386 245 SDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 245 s~~~~~~~G~~i~~dgG~~~~ 265 (298)
+. ...+|+.+++|+|..+-
T Consensus 230 ~~--~~~~g~~~~i~~g~~~~ 248 (252)
T PRK06077 230 KI--ESITGQVFVLDSGESLK 248 (252)
T ss_pred Cc--cccCCCeEEecCCeecc
Confidence 64 45789999999998875
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=245.29 Aligned_cols=246 Identities=31% Similarity=0.451 Sum_probs=209.8
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCC-hhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.+++.|+++||||+++||++++++|+++|++|+++.++ ....+.....+...+.++.++.||+++.++++++++.+.+.
T Consensus 2 ~~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (249)
T PRK12825 2 GSLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVER 81 (249)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHH
Confidence 34667899999999999999999999999998776665 44455566666666777899999999999999999999988
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
++.+|++||++|.....++.+.+.+++++.+++|+.+++++++.+.+++.+.+ .+++|++||..+..+.+..
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~~~i~~SS~~~~~~~~~~ 153 (249)
T PRK12825 82 FGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR--------GGRIVNISSVAGLPGWPGR 153 (249)
T ss_pred cCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--------CCEEEEECccccCCCCCCc
Confidence 99999999999987777777788999999999999999999999999998765 5789999999988888888
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
..|+.+|++++.+++.++.++. ++||+++.++||++.++....... ...... ....+..++.+++|+++.+.+++++
T Consensus 154 ~~y~~sK~~~~~~~~~~~~~~~-~~~i~~~~i~pg~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~dva~~~~~~~~~ 230 (249)
T PRK12825 154 SNYAAAKAGLVGLTKALARELA-EYGITVNMVAPGDIDTDMKEATIE-EAREAK-DAETPLGRSGTPEDIARAVAFLCSD 230 (249)
T ss_pred hHHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEEECCccCCccccccc-hhHHhh-hccCCCCCCcCHHHHHHHHHHHhCc
Confidence 9999999999999999999987 779999999999999886544322 211111 1245677789999999999999988
Q ss_pred CCCCccccEEEeCCCCCC
Q 022386 247 AGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 247 ~~~~~~G~~i~~dgG~~~ 264 (298)
...+++|+.++++||..+
T Consensus 231 ~~~~~~g~~~~i~~g~~~ 248 (249)
T PRK12825 231 ASDYITGQVIEVTGGVDV 248 (249)
T ss_pred cccCcCCCEEEeCCCEee
Confidence 788999999999999654
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-35 Score=270.44 Aligned_cols=241 Identities=25% Similarity=0.323 Sum_probs=202.7
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh--hHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK--TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
..++||+++||||++|||++++++|+++|++|+++++.. +.+++..+ +.+ ..++.||+++.++++++++.+.+
T Consensus 206 ~~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~---~~~--~~~~~~Dv~~~~~~~~~~~~~~~ 280 (450)
T PRK08261 206 RPLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVAN---RVG--GTALALDITAPDAPARIAEHLAE 280 (450)
T ss_pred cCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHH---HcC--CeEEEEeCCCHHHHHHHHHHHHH
Confidence 356799999999999999999999999999999998853 22333322 222 35788999999999999999999
Q ss_pred HhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC
Q 022386 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~ 165 (298)
.++++|++|||||....+.+.+.+.+.|+..+++|+.+++++++++.+.+..+. +++||++||..+..+.+.
T Consensus 281 ~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~--------~g~iv~~SS~~~~~g~~~ 352 (450)
T PRK08261 281 RHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGD--------GGRIVGVSSISGIAGNRG 352 (450)
T ss_pred hCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcC--------CCEEEEECChhhcCCCCC
Confidence 999999999999987777888889999999999999999999999999755433 588999999999888888
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcC
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s 245 (298)
+..|+++|+++++|+++++.|+. ++||++|+|.||+++|++.... + ....+......+..+...|+|+++++.||++
T Consensus 353 ~~~Y~asKaal~~~~~~la~el~-~~gi~v~~v~PG~i~t~~~~~~-~-~~~~~~~~~~~~l~~~~~p~dva~~~~~l~s 429 (450)
T PRK08261 353 QTNYAASKAGVIGLVQALAPLLA-ERGITINAVAPGFIETQMTAAI-P-FATREAGRRMNSLQQGGLPVDVAETIAWLAS 429 (450)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHh-hhCcEEEEEEeCcCcchhhhcc-c-hhHHHHHhhcCCcCCCCCHHHHHHHHHHHhC
Confidence 99999999999999999999997 7899999999999998754322 1 1111112223456677899999999999999
Q ss_pred CCCCCccccEEEeCCCCCC
Q 022386 246 DAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 246 ~~~~~~~G~~i~~dgG~~~ 264 (298)
+.+.++||++|.+||+..+
T Consensus 430 ~~~~~itG~~i~v~g~~~~ 448 (450)
T PRK08261 430 PASGGVTGNVVRVCGQSLL 448 (450)
T ss_pred hhhcCCCCCEEEECCCccc
Confidence 9899999999999998765
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-35 Score=252.23 Aligned_cols=222 Identities=26% Similarity=0.270 Sum_probs=189.5
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
+++|+++||||++|||++++++|+++|++|++++|+.+++++.. . ..+.++.||++|.++++++++++.+.+++
T Consensus 1 ~~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~----~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~ 74 (273)
T PRK06182 1 MQKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA----S--LGVHPLSLDVTDEASIKAAVDTIIAEEGR 74 (273)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----h--CCCeEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 36899999999999999999999999999999999977655432 2 23778999999999999999999999999
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhh
Q 022386 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 169 (298)
Q Consensus 90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y 169 (298)
+|++|||||....+++.+.+.++++..+++|+.+++.+++.++|.|++++ .|+||++||..+..+.+....|
T Consensus 75 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y 146 (273)
T PRK06182 75 IDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR--------SGRIINISSMGGKIYTPLGAWY 146 (273)
T ss_pred CCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC--------CCEEEEEcchhhcCCCCCccHh
Confidence 99999999988778888889999999999999999999999999998765 5889999998887777777889
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC---------C-hHH----HHHHHhhhccCCCCCCHHH
Q 022386 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---------A-PEE----IRSKATDYMAAYKFGEKWD 235 (298)
Q Consensus 170 ~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~---------~-~~~----~~~~~~~~~~~~~~~~~~d 235 (298)
++||+++++++++++.|+. ++||+++.|+||+++|++..... . ..+ ....+....+.+++.+|+|
T Consensus 147 ~~sKaa~~~~~~~l~~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (273)
T PRK06182 147 HATKFALEGFSDALRLEVA-PFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSV 225 (273)
T ss_pred HHHHHHHHHHHHHHHHHhc-ccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHH
Confidence 9999999999999999997 78999999999999988532110 0 011 1123344446778899999
Q ss_pred HHHHHHHhcCC
Q 022386 236 IAMAALYLASD 246 (298)
Q Consensus 236 va~~~~~L~s~ 246 (298)
+|+.+.++++.
T Consensus 226 vA~~i~~~~~~ 236 (273)
T PRK06182 226 IADAISKAVTA 236 (273)
T ss_pred HHHHHHHHHhC
Confidence 99999999975
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=245.71 Aligned_cols=237 Identities=28% Similarity=0.334 Sum_probs=204.6
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
++.+++|+++|||++++||++++++|+++|++|++++|+.....+..+++... .+.++.+|++|.++++++++++.+.
T Consensus 2 ~~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (239)
T PRK12828 2 EHSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD--ALRIGGIDLVDPQAARRAVDEVNRQ 79 (239)
T ss_pred CCCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc--CceEEEeecCCHHHHHHHHHHHHHH
Confidence 45688999999999999999999999999999999999887666666655543 3567789999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
++++|++||++|.....+..+.+.+++++.+++|+.+++.+++++.+.+.+++ .+++|++||..+..+.+..
T Consensus 80 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~ 151 (239)
T PRK12828 80 FGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASG--------GGRIVNIGAGAALKAGPGM 151 (239)
T ss_pred hCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcC--------CCEEEEECchHhccCCCCc
Confidence 99999999999977666667778999999999999999999999999998765 5789999999988888888
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
..|+.+|++++.+++.++.++. +.||+++.+.||++.++......... ....+.+++|+++++.+++++
T Consensus 152 ~~y~~sk~a~~~~~~~~a~~~~-~~~i~~~~i~pg~v~~~~~~~~~~~~----------~~~~~~~~~dva~~~~~~l~~ 220 (239)
T PRK12828 152 GAYAAAKAGVARLTEALAAELL-DRGITVNAVLPSIIDTPPNRADMPDA----------DFSRWVTPEQIAAVIAFLLSD 220 (239)
T ss_pred chhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecCcccCcchhhcCCch----------hhhcCCCHHHHHHHHHHHhCc
Confidence 9999999999999999999986 77999999999999887432221111 223467899999999999998
Q ss_pred CCCCccccEEEeCCCCCC
Q 022386 247 AGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 247 ~~~~~~G~~i~~dgG~~~ 264 (298)
...+++|+.+.+|||+++
T Consensus 221 ~~~~~~g~~~~~~g~~~~ 238 (239)
T PRK12828 221 EAQAITGASIPVDGGVAL 238 (239)
T ss_pred ccccccceEEEecCCEeC
Confidence 777899999999999765
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=245.60 Aligned_cols=228 Identities=25% Similarity=0.303 Sum_probs=197.9
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
++|+++||||+++||++++++|+++|++|++++|+.+..+++.+.+.+.+.++.++.+|+++++++.++++.+.+.++++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP 84 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 45899999999999999999999999999999999888778877777767789999999999999999999999999999
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhH
Q 022386 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS 170 (298)
Q Consensus 91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~ 170 (298)
|++|||+|.....++.+.+.++++..+++|+.+++++++.++++|.+++ .++||++||..+..+.+....|+
T Consensus 85 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~ 156 (241)
T PRK07454 85 DVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG--------GGLIINVSSIAARNAFPQWGAYC 156 (241)
T ss_pred CEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC--------CcEEEEEccHHhCcCCCCccHHH
Confidence 9999999987767777888999999999999999999999999998765 58899999999888888889999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCCCC
Q 022386 171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKY 250 (298)
Q Consensus 171 ~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~ 250 (298)
.+|++++.++++++.|+. +.||+++.|.||+++|++....... ......++.+++|+|+++.+|++++...
T Consensus 157 ~sK~~~~~~~~~~a~e~~-~~gi~v~~i~pg~i~t~~~~~~~~~--------~~~~~~~~~~~~~va~~~~~l~~~~~~~ 227 (241)
T PRK07454 157 VSKAALAAFTKCLAEEER-SHGIRVCTITLGAVNTPLWDTETVQ--------ADFDRSAMLSPEQVAQTILHLAQLPPSA 227 (241)
T ss_pred HHHHHHHHHHHHHHHHhh-hhCCEEEEEecCcccCCcccccccc--------cccccccCCCHHHHHHHHHHHHcCCccc
Confidence 999999999999999997 7799999999999998764321110 0111235679999999999999977665
Q ss_pred ccccE
Q 022386 251 VNGNT 255 (298)
Q Consensus 251 ~~G~~ 255 (298)
+.+..
T Consensus 228 ~~~~~ 232 (241)
T PRK07454 228 VIEDL 232 (241)
T ss_pred eeeeE
Confidence 55543
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=251.42 Aligned_cols=248 Identities=22% Similarity=0.243 Sum_probs=203.1
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
+|++++++||||++|||++++++|+++|++|++++|+.+.+++..+.+. ++.++.||++++++++++++.+.+.++
T Consensus 2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (273)
T PRK07825 2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG----LVVGGPLDVTDPASFAAFLDAVEADLG 77 (273)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----cceEEEccCCCHHHHHHHHHHHHHHcC
Confidence 5778999999999999999999999999999999999887776655553 477889999999999999999999999
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchh
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~ 168 (298)
++|++|||||.....++.+.+.+.+++++++|+.+++.+++.++|.|.+++ .|+||++||..+..+.+....
T Consensus 78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~ 149 (273)
T PRK07825 78 PIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG--------RGHVVNVASLAGKIPVPGMAT 149 (273)
T ss_pred CCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--------CCEEEEEcCccccCCCCCCcc
Confidence 999999999988778888889999999999999999999999999998876 689999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCC
Q 022386 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (298)
Q Consensus 169 Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~ 248 (298)
|++||+++..++++++.|+. +.||+++.|+||+++|++...... .....+.+++|+|+.+..++....
T Consensus 150 Y~asKaa~~~~~~~l~~el~-~~gi~v~~v~Pg~v~t~~~~~~~~-----------~~~~~~~~~~~va~~~~~~l~~~~ 217 (273)
T PRK07825 150 YCASKHAVVGFTDAARLELR-GTGVHVSVVLPSFVNTELIAGTGG-----------AKGFKNVEPEDVAAAIVGTVAKPR 217 (273)
T ss_pred hHHHHHHHHHHHHHHHHHhh-ccCcEEEEEeCCcCcchhhccccc-----------ccCCCCCCHHHHHHHHHHHHhCCC
Confidence 99999999999999999997 789999999999999875432210 112246799999999999997643
Q ss_pred CCccccEEEeCCC--CCCCCCCCCchhHHHhhHHhhhhc
Q 022386 249 KYVNGNTLIVDGG--NWLSNPRDLPKEAVNQLSRAVERK 285 (298)
Q Consensus 249 ~~~~G~~i~~dgG--~~~~~~~~~~~~~~~~~~~~~~~~ 285 (298)
..+ .+.+- ........+|..+++.+.+.+...
T Consensus 218 ~~~-----~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 251 (273)
T PRK07825 218 PEV-----RVPRALGPLAQAQRLLPRRVREALNRLLGGD 251 (273)
T ss_pred CEE-----eccHHHHHHHHHHHhCcHHHHHHHHHHhccc
Confidence 311 11110 001112355666666665555543
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-34 Score=247.38 Aligned_cols=248 Identities=29% Similarity=0.423 Sum_probs=208.9
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
++++++|+++||||+++||++++++|+++|++|++++|+.+..++..+..... ++.++.+|++++++++.+++++.+.
T Consensus 6 ~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (264)
T PRK12829 6 LKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGA--KVTATVADVADPAQVERVFDTAVER 83 (264)
T ss_pred hhccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcC--ceEEEEccCCCHHHHHHHHHHHHHH
Confidence 45688999999999999999999999999999999999987766665555432 5788999999999999999999999
Q ss_pred hCCccEEEECCCCC-CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC
Q 022386 87 FGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (298)
Q Consensus 87 ~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~ 165 (298)
++++|++||++|.. ........+.+.+.+.+++|+.+++++++.+++.+...+. ++.|+++||..+..+.+.
T Consensus 84 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-------~~~vv~~ss~~~~~~~~~ 156 (264)
T PRK12829 84 FGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGH-------GGVIIALSSVAGRLGYPG 156 (264)
T ss_pred hCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC-------CeEEEEecccccccCCCC
Confidence 99999999999986 5556667788999999999999999999999999887541 267999999888888888
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC---------ChHHHHHHHhhhccCCCCCCHHHH
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---------APEEIRSKATDYMAAYKFGEKWDI 236 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dv 236 (298)
...|+.+|++++.+++.++.++. ..+++++.+.||+++|++..... .............+.+++.+++|+
T Consensus 157 ~~~y~~~K~a~~~~~~~l~~~~~-~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 235 (264)
T PRK12829 157 RTPYAASKWAVVGLVKSLAIELG-PLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDI 235 (264)
T ss_pred CchhHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHHHH
Confidence 88999999999999999999987 67999999999999887542221 111222233444567789999999
Q ss_pred HHHHHHhcCCCCCCccccEEEeCCCCCC
Q 022386 237 AMAALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 237 a~~~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
++.+.+++++....++|+.+.+|||.+.
T Consensus 236 a~~~~~l~~~~~~~~~g~~~~i~~g~~~ 263 (264)
T PRK12829 236 AATALFLASPAARYITGQAISVDGNVEY 263 (264)
T ss_pred HHHHHHHcCccccCccCcEEEeCCCccc
Confidence 9999999987777889999999999763
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=277.66 Aligned_cols=252 Identities=29% Similarity=0.364 Sum_probs=219.3
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
....+.||+++||||+||||+++++.|+++|++|++++|+.+.++...+.+... .++.++.||++++++++++++++.+
T Consensus 416 ~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~~~ 494 (681)
T PRK08324 416 KPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP-DRALGVACDVTDEAAVQAAFEEAAL 494 (681)
T ss_pred CCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc-CcEEEEEecCCCHHHHHHHHHHHHH
Confidence 455788999999999999999999999999999999999988877777766544 5688999999999999999999999
Q ss_pred HhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC
Q 022386 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~ 165 (298)
.++++|++|||||.....++.+.+.+.|+..+++|+.+++.+++.+.+.|++++. +|+||++||..+..+.++
T Consensus 495 ~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~-------~g~iV~vsS~~~~~~~~~ 567 (681)
T PRK08324 495 AFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGL-------GGSIVFIASKNAVNPGPN 567 (681)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-------CcEEEEECCccccCCCCC
Confidence 9999999999999888888888899999999999999999999999999987541 378999999999888888
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcc--cCCcccCcC----------ChHHHHHHHhhhccCCCCCCH
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI--KDTAGVSKL----------APEEIRSKATDYMAAYKFGEK 233 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v--~t~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~ 233 (298)
...|++||++++.++++++.+++ +.||++|.|+||.+ .|....... ..++..+.+....+.+++.++
T Consensus 568 ~~~Y~asKaa~~~l~~~la~e~~-~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~ 646 (681)
T PRK08324 568 FGAYGAAKAAELHLVRQLALELG-PDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTP 646 (681)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccCH
Confidence 99999999999999999999997 78999999999999 665432211 122233345566778889999
Q ss_pred HHHHHHHHHhcCCCCCCccccEEEeCCCCCCCC
Q 022386 234 WDIAMAALYLASDAGKYVNGNTLIVDGGNWLSN 266 (298)
Q Consensus 234 ~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~ 266 (298)
+|+++++.+++++.....+|+.+++|||.....
T Consensus 647 ~DvA~a~~~l~s~~~~~~tG~~i~vdgG~~~~~ 679 (681)
T PRK08324 647 EDVAEAVVFLASGLLSKTTGAIITVDGGNAAAF 679 (681)
T ss_pred HHHHHHHHHHhCccccCCcCCEEEECCCchhcc
Confidence 999999999998777889999999999977654
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-34 Score=245.35 Aligned_cols=237 Identities=25% Similarity=0.378 Sum_probs=204.0
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCC-CCeEEEEccCC--CHHHHHHHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVR--KREDAVRVVES 82 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dls--~~~~~~~~~~~ 82 (298)
+...+++|+++||||+++||.+++++|+++|++|++++|+.+..++..+++.+.+ .++.++.+|++ ++++++++++.
T Consensus 6 ~~~~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 85 (247)
T PRK08945 6 KPDLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADT 85 (247)
T ss_pred cccccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHH
Confidence 4567899999999999999999999999999999999999888888878777654 35677777775 78999999999
Q ss_pred HHHHhCCccEEEECCCCC-CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc
Q 022386 83 TINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 161 (298)
Q Consensus 83 ~~~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~ 161 (298)
+.+.++++|++|||||.. ...++.+.+.+.|++.+++|+.++++++++++++|.+++ .++||++||..+..
T Consensus 86 ~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~--------~~~iv~~ss~~~~~ 157 (247)
T PRK08945 86 IEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSP--------AASLVFTSSSVGRQ 157 (247)
T ss_pred HHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC--------CCEEEEEccHhhcC
Confidence 999999999999999975 335666778899999999999999999999999998865 57899999999888
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHH
Q 022386 162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241 (298)
Q Consensus 162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~ 241 (298)
+.+.+..|++||++++.++++++.++. ..||+++.++||++.|++........ ...++.+|+|+++.+.
T Consensus 158 ~~~~~~~Y~~sK~a~~~~~~~~~~~~~-~~~i~~~~v~pg~v~t~~~~~~~~~~----------~~~~~~~~~~~~~~~~ 226 (247)
T PRK08945 158 GRANWGAYAVSKFATEGMMQVLADEYQ-GTNLRVNCINPGGTRTAMRASAFPGE----------DPQKLKTPEDIMPLYL 226 (247)
T ss_pred CCCCCcccHHHHHHHHHHHHHHHHHhc-ccCEEEEEEecCCccCcchhhhcCcc----------cccCCCCHHHHHHHHH
Confidence 888899999999999999999999997 77999999999999887432222111 1245789999999999
Q ss_pred HhcCCCCCCccccEEEeCCC
Q 022386 242 YLASDAGKYVNGNTLIVDGG 261 (298)
Q Consensus 242 ~L~s~~~~~~~G~~i~~dgG 261 (298)
|++++.+.+++|+++...-+
T Consensus 227 ~~~~~~~~~~~g~~~~~~~~ 246 (247)
T PRK08945 227 YLMGDDSRRKNGQSFDAQPG 246 (247)
T ss_pred HHhCccccccCCeEEeCCCC
Confidence 99999889999999876443
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=250.78 Aligned_cols=268 Identities=21% Similarity=0.195 Sum_probs=217.5
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC--CCCeEEEEccCCCHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVES 82 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~ 82 (298)
....++.|++++|||+++|||+++|+.|+.+|++|++..|+.++.++..+.+... ..++.+++||+++.++++++++.
T Consensus 28 ~~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~ 107 (314)
T KOG1208|consen 28 THGIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEE 107 (314)
T ss_pred eccccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHH
Confidence 5567889999999999999999999999999999999999999999999999863 45688899999999999999999
Q ss_pred HHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC
Q 022386 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (298)
Q Consensus 83 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~ 162 (298)
+...++++|++|||||+..... ..+.|++|.+|.+|++|++++++.++|.|++.. +++||++||..+...
T Consensus 108 ~~~~~~~ldvLInNAGV~~~~~--~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~--------~~RIV~vsS~~~~~~ 177 (314)
T KOG1208|consen 108 FKKKEGPLDVLINNAGVMAPPF--SLTKDGLELTFATNYLGHFLLTELLLPLLKRSA--------PSRIVNVSSILGGGK 177 (314)
T ss_pred HHhcCCCccEEEeCcccccCCc--ccCccchhheehhhhHHHHHHHHHHHHHHhhCC--------CCCEEEEcCccccCc
Confidence 9999999999999999865543 567789999999999999999999999999865 488999999876110
Q ss_pred -------------CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCC
Q 022386 163 -------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK 229 (298)
Q Consensus 163 -------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~ 229 (298)
+....+|+.||.++..+++.+++.+. + ||.+++++||.+.|+.... .......+........
T Consensus 178 ~~~~~l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~-~-~V~~~~~hPG~v~t~~l~r---~~~~~~~l~~~l~~~~ 252 (314)
T KOG1208|consen 178 IDLKDLSGEKAKLYSSDAAYALSKLANVLLANELAKRLK-K-GVTTYSVHPGVVKTTGLSR---VNLLLRLLAKKLSWPL 252 (314)
T ss_pred cchhhccchhccCccchhHHHHhHHHHHHHHHHHHHHhh-c-CceEEEECCCcccccceec---chHHHHHHHHHHHHHh
Confidence 12234699999999999999999996 5 9999999999999873333 1222222333333333
Q ss_pred CCCHHHHHHHHHHhcCC-CCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhhhccCC
Q 022386 230 FGEKWDIAMAALYLASD-AGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKSRD 288 (298)
Q Consensus 230 ~~~~~dva~~~~~L~s~-~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (298)
+.++++-|+..++++.. +-...+|.. .-|+..........++...+++|..+++....
T Consensus 253 ~ks~~~ga~t~~~~a~~p~~~~~sg~y-~~d~~~~~~~~~a~d~~~~~~lw~~s~~l~~~ 311 (314)
T KOG1208|consen 253 TKSPEQGAATTCYAALSPELEGVSGKY-FEDCAIAEPSEEALDEELAEKLWKFSEELIDE 311 (314)
T ss_pred ccCHHHHhhheehhccCccccCccccc-cccccccccccccCCHHHHHHHHHHHHHHhhh
Confidence 46899999999999865 455677766 34455444555678888899999988877654
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-34 Score=247.75 Aligned_cols=225 Identities=21% Similarity=0.210 Sum_probs=194.9
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+.++.++.||++++++++++++.+.+.++++|+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 57999999999999999999999999999999998888888888877788999999999999999999999999999999
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHHH
Q 022386 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 172 (298)
Q Consensus 93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~s 172 (298)
+|||||....+.+.+.+.++|++.+++|+.+++.+++.++|.|.+.+ .++||++||..+..+.+....|+++
T Consensus 81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--------~~~iv~vsS~~~~~~~~~~~~Y~~s 152 (270)
T PRK05650 81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK--------SGRIVNIASMAGLMQGPAMSSYNVA 152 (270)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC--------CCEEEEECChhhcCCCCCchHHHHH
Confidence 99999988777888889999999999999999999999999998765 5889999999999998999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 173 K~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
|+++++++++++.|+. +.||+++.|+||+++|+.........................+++|+|+.++..+..
T Consensus 153 Kaa~~~~~~~l~~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~l~~ 225 (270)
T PRK05650 153 KAGVVALSETLLVELA-DDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLEKSPITAADIADYIYQQVAK 225 (270)
T ss_pred HHHHHHHHHHHHHHhc-ccCcEEEEEecCccccCcccccccCchhHHHHHHHHhhcCCCCHHHHHHHHHHHHhC
Confidence 9999999999999997 779999999999999886543221111111111112223457999999999998865
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=249.87 Aligned_cols=240 Identities=23% Similarity=0.284 Sum_probs=199.4
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.+|+++||||++|||++++++|+++|+.|++++|+.+.+++..+.+ +.++..+++|++++++++++++.+.+.++++
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 78 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY---GDRLLPLALDVTDRAAVFAAVETAVEHFGRL 78 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc---cCCeeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999999999999999999977665554432 4467888999999999999999999999999
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhH
Q 022386 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS 170 (298)
Q Consensus 91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~ 170 (298)
|++|||||....+++.+.+.++|++.+++|+.+++.+++.++|.|++.+ .++||++||..+..+.+....|+
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~~iv~vsS~~~~~~~~~~~~Y~ 150 (275)
T PRK08263 79 DIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR--------SGHIIQISSIGGISAFPMSGIYH 150 (275)
T ss_pred CEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--------CCEEEEEcChhhcCCCCCccHHH
Confidence 9999999988778888889999999999999999999999999998765 57899999999998888899999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC-------hHHHHHHHhhhccCCCC-CCHHHHHHHHHH
Q 022386 171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-------PEEIRSKATDYMAAYKF-GEKWDIAMAALY 242 (298)
Q Consensus 171 ~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~-~~~~dva~~~~~ 242 (298)
.+|++++.+++.++.|++ ++||+++.|.||+++|++...... .+..........+..++ .+|+|+++.+++
T Consensus 151 ~sKaa~~~~~~~la~e~~-~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~ 229 (275)
T PRK08263 151 ASKWALEGMSEALAQEVA-EFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAAEALLK 229 (275)
T ss_pred HHHHHHHHHHHHHHHHhh-hhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHHHHHHH
Confidence 999999999999999997 789999999999999876532110 11222233344455667 899999999999
Q ss_pred hcCCCCCCccccEEEeCCCCCC
Q 022386 243 LASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 243 L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
+++.+ ...++.+...++..+
T Consensus 230 l~~~~--~~~~~~~~~~~~~~~ 249 (275)
T PRK08263 230 LVDAE--NPPLRLFLGSGVLDL 249 (275)
T ss_pred HHcCC--CCCeEEEeCchHHHH
Confidence 99753 234555554444333
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-34 Score=251.48 Aligned_cols=267 Identities=18% Similarity=0.170 Sum_probs=205.0
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC--CCCeEEEEccCCCHHHHHHHHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
++.+++||+++||||++|||+++|+.|+++|++|++++|+.+..++..+.+... +.++.++.+|++|.++++++++++
T Consensus 10 ~~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~ 89 (306)
T PRK06197 10 DIPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADAL 89 (306)
T ss_pred ccccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHH
Confidence 456889999999999999999999999999999999999988777766666543 356889999999999999999999
Q ss_pred HHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc--
Q 022386 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-- 161 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~-- 161 (298)
.+.++++|++|||||+.... .+.+.++++..|++|+.+++.+++.+++.|++.. .++||++||..+..
T Consensus 90 ~~~~~~iD~li~nAg~~~~~--~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~--------~~~iV~vSS~~~~~~~ 159 (306)
T PRK06197 90 RAAYPRIDLLINNAGVMYTP--KQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP--------GSRVVTVSSGGHRIRA 159 (306)
T ss_pred HhhCCCCCEEEECCccccCC--CccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC--------CCEEEEECCHHHhccC
Confidence 99999999999999975432 3456678999999999999999999999998764 57899999986543
Q ss_pred -----------CCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEE--eCCcccCCcccCcCChHHHHHHHhhhccCC
Q 022386 162 -----------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI--APGPIKDTAGVSKLAPEEIRSKATDYMAAY 228 (298)
Q Consensus 162 -----------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i--~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~ 228 (298)
+.++...|+.||++++.+++.++.+++ +.|++|+++ +||+++|++.... + ......+....+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~-~~~i~v~~v~~~PG~v~T~~~~~~-~-~~~~~~~~~~~~~- 235 (306)
T PRK06197 160 AIHFDDLQWERRYNRVAAYGQSKLANLLFTYELQRRLA-AAGATTIAVAAHPGVSNTELARNL-P-RALRPVATVLAPL- 235 (306)
T ss_pred CCCccccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhh-cCCCCeEEEEeCCCcccCcccccC-c-HHHHHHHHHHHhh-
Confidence 223467899999999999999999997 667776655 7999999865432 1 1111111111111
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC--------CCCCCchhHHHhhHHhhhhccC
Q 022386 229 KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS--------NPRDLPKEAVNQLSRAVERKSR 287 (298)
Q Consensus 229 ~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~--------~~~~~~~~~~~~~~~~~~~~~~ 287 (298)
...++++-+...++++.+ ....+|..+..+|+.... .+....+...+++|..+++.++
T Consensus 236 ~~~~~~~g~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~ 301 (306)
T PRK06197 236 LAQSPEMGALPTLRAATD-PAVRGGQYYGPDGFGEQRGYPKVVASSAQSHDEDLQRRLWAVSEELTG 301 (306)
T ss_pred hcCCHHHHHHHHHHHhcC-CCcCCCeEEccCcccccCCCCccCCCccccCCHHHHHHHHHHHHHHHC
Confidence 134677777777777654 345689988887765321 1223456778888888887776
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=240.32 Aligned_cols=244 Identities=31% Similarity=0.396 Sum_probs=204.3
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh-hHHHHHHHHHHhC-CCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~-~~~~~~~~~~~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
..+++++++||||+++||++++++|+++|++|++++|+. ...+...+.+.+. +..+.++.+|+++++++.++++++.+
T Consensus 2 ~~~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 81 (249)
T PRK09135 2 MTDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVA 81 (249)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 345779999999999999999999999999999999864 3455555555543 34588899999999999999999999
Q ss_pred HhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC
Q 022386 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~ 165 (298)
.++++|++|||||.....++.+.+.++++.++++|+.+++.+.+++.+++.+. .+.++++++..+..+.++
T Consensus 82 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~ 152 (249)
T PRK09135 82 AFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ---------RGAIVNITDIHAERPLKG 152 (249)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC---------CeEEEEEeChhhcCCCCC
Confidence 99999999999998766677777889999999999999999999999998764 477888888777777778
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcC
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s 245 (298)
...|+.||++++.+++.++.++. + +|+++.+.||++.++...... +...........+.....+++|+++++.+++.
T Consensus 153 ~~~Y~~sK~~~~~~~~~l~~~~~-~-~i~~~~v~pg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~ 229 (249)
T PRK09135 153 YPVYCAAKAALEMLTRSLALELA-P-EVRVNAVAPGAILWPEDGNSF-DEEARQAILARTPLKRIGTPEDIAEAVRFLLA 229 (249)
T ss_pred chhHHHHHHHHHHHHHHHHHHHC-C-CCeEEEEEeccccCccccccC-CHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcC
Confidence 89999999999999999999985 4 799999999999988654333 23333334445566778899999999988887
Q ss_pred CCCCCccccEEEeCCCCCC
Q 022386 246 DAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 246 ~~~~~~~G~~i~~dgG~~~ 264 (298)
+ ..+.+|+.+++++|..+
T Consensus 230 ~-~~~~~g~~~~i~~g~~~ 247 (249)
T PRK09135 230 D-ASFITGQILAVDGGRSL 247 (249)
T ss_pred c-cccccCcEEEECCCeec
Confidence 5 46789999999999765
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-34 Score=250.13 Aligned_cols=222 Identities=21% Similarity=0.241 Sum_probs=189.6
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
+....+++|+++||||++|||+++|+.|+++|++|++++|+.+.+++..+++...+.++.++.+|++|.++++++++++.
T Consensus 33 ~~~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~ 112 (293)
T PRK05866 33 RQPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVE 112 (293)
T ss_pred CCCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 44567889999999999999999999999999999999999988888888887767778899999999999999999999
Q ss_pred HHhCCccEEEECCCCCCCCCCCCC--CHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc-
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDL--SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT- 161 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~- 161 (298)
+.++++|++|||||.....++.+. +.++++..+++|+.+++.++++++|+|.+.+ .|+||++||.....
T Consensus 113 ~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~ 184 (293)
T PRK05866 113 KRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERG--------DGHIINVATWGVLSE 184 (293)
T ss_pred HHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------CcEEEEECChhhcCC
Confidence 999999999999998665555442 4588999999999999999999999998765 58899999976654
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHH
Q 022386 162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241 (298)
Q Consensus 162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~ 241 (298)
+.+....|++||+|+++++++++.|+. ++||+|++|+||+++|++...... .......+|+++|+.+.
T Consensus 185 ~~p~~~~Y~asKaal~~l~~~la~e~~-~~gI~v~~v~pg~v~T~~~~~~~~-----------~~~~~~~~pe~vA~~~~ 252 (293)
T PRK05866 185 ASPLFSVYNASKAALSAVSRVIETEWG-DRGVHSTTLYYPLVATPMIAPTKA-----------YDGLPALTADEAAEWMV 252 (293)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEEcCcccCcccccccc-----------ccCCCCCCHHHHHHHHH
Confidence 356778999999999999999999997 789999999999999886532110 01112469999999998
Q ss_pred HhcCC
Q 022386 242 YLASD 246 (298)
Q Consensus 242 ~L~s~ 246 (298)
..+..
T Consensus 253 ~~~~~ 257 (293)
T PRK05866 253 TAART 257 (293)
T ss_pred HHHhc
Confidence 88854
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-34 Score=272.75 Aligned_cols=232 Identities=22% Similarity=0.266 Sum_probs=200.0
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
..+.+++++||||++|||++++++|+++|++|++++|+.+.++++.+.++..+.++.++.||++|.++++++++++.+.+
T Consensus 311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 390 (582)
T PRK05855 311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEH 390 (582)
T ss_pred ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 45678999999999999999999999999999999999988888888888777789999999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
+++|++|||||....+++.+.+.+++++++++|+.|+++++++++|.|.+++. +|+||++||..++.+.+...
T Consensus 391 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~-------~g~iv~~sS~~~~~~~~~~~ 463 (582)
T PRK05855 391 GVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGT-------GGHIVNVASAAAYAPSRSLP 463 (582)
T ss_pred CCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-------CcEEEEECChhhccCCCCCc
Confidence 99999999999877788888899999999999999999999999999987641 48999999999999988999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC----hHH--HHHHHhhhccCCCCCCHHHHHHHHH
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA----PEE--IRSKATDYMAAYKFGEKWDIAMAAL 241 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~dva~~~~ 241 (298)
.|++||++++.++++++.|++ ++||+|++|+||+++|++...... .++ ............+..+|+++|+.++
T Consensus 464 ~Y~~sKaa~~~~~~~l~~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~ 542 (582)
T PRK05855 464 AYATSKAAVLMLSECLRAELA-AAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPEKVAKAIV 542 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhccccCCCHHHHHHHHH
Confidence 999999999999999999998 789999999999999986543221 111 1111111222334568999999999
Q ss_pred HhcCCC
Q 022386 242 YLASDA 247 (298)
Q Consensus 242 ~L~s~~ 247 (298)
+++...
T Consensus 543 ~~~~~~ 548 (582)
T PRK05855 543 DAVKRN 548 (582)
T ss_pred HHHHcC
Confidence 999754
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-34 Score=242.13 Aligned_cols=227 Identities=26% Similarity=0.389 Sum_probs=191.6
Q ss_pred EEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEE
Q 022386 16 LLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVN 95 (298)
Q Consensus 16 lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~ 95 (298)
+||||++|||++++++|+++|++|++++|+.+..+...+.++. +.++.++.||+++++++++++++ ++++|++||
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~----~~~id~li~ 75 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG-GAPVRTAALDITDEAAVDAFFAE----AGPFDHVVI 75 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCceEEEEccCCCHHHHHHHHHh----cCCCCEEEE
Confidence 6999999999999999999999999999998777776666642 56688999999999999998875 478999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHHHHHH
Q 022386 96 AAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAA 175 (298)
Q Consensus 96 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a 175 (298)
|+|.....++.+.+.+++++++++|+.+++++++ .+.+.+ .++||+++|..++.+.+....|+++|++
T Consensus 76 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~~----------~g~iv~~ss~~~~~~~~~~~~Y~~sK~a 143 (230)
T PRK07041 76 TAADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIAP----------GGSLTFVSGFAAVRPSASGVLQGAINAA 143 (230)
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhcC----------CeEEEEECchhhcCCCCcchHHHHHHHH
Confidence 9998777777788899999999999999999999 444432 5889999999999888889999999999
Q ss_pred HHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC--hHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCCCCccc
Q 022386 176 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNG 253 (298)
Q Consensus 176 ~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G 253 (298)
+++++++++.|+. +||++.++||+++|++...... ............+.+++.+|+|+++++.+|+++ .+++|
T Consensus 144 ~~~~~~~la~e~~---~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~--~~~~G 218 (230)
T PRK07041 144 LEALARGLALELA---PVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAAN--GFTTG 218 (230)
T ss_pred HHHHHHHHHHHhh---CceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcC--CCcCC
Confidence 9999999999996 4999999999999876432211 122333344556777888999999999999974 58999
Q ss_pred cEEEeCCCCCC
Q 022386 254 NTLIVDGGNWL 264 (298)
Q Consensus 254 ~~i~~dgG~~~ 264 (298)
+.+.+|||..+
T Consensus 219 ~~~~v~gg~~~ 229 (230)
T PRK07041 219 STVLVDGGHAI 229 (230)
T ss_pred cEEEeCCCeec
Confidence 99999999764
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=246.30 Aligned_cols=226 Identities=21% Similarity=0.192 Sum_probs=189.7
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
+.+|+++||||+||||++++++|+++|++|++++|+.+.++.+.+. .+.++.++.+|++|++++.++++.+.+.+++
T Consensus 2 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~ 78 (277)
T PRK06180 2 SSMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL---HPDRALARLLDVTDFDAIDAVVADAEATFGP 78 (277)
T ss_pred CCCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh---cCCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 3578999999999999999999999999999999997765544332 2456888999999999999999999999999
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhh
Q 022386 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 169 (298)
Q Consensus 90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y 169 (298)
+|++|||||....+++.+.+.++|++.+++|+.++++++++++|+|++.. .++||++||..+..+.++...|
T Consensus 79 ~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~--------~~~iv~iSS~~~~~~~~~~~~Y 150 (277)
T PRK06180 79 IDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR--------RGHIVNITSMGGLITMPGIGYY 150 (277)
T ss_pred CCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC--------CCEEEEEecccccCCCCCcchh
Confidence 99999999987777888889999999999999999999999999998765 5789999999999888899999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC-----ChHHHHH------HHhhhccCCCCCCHHHHHH
Q 022386 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-----APEEIRS------KATDYMAAYKFGEKWDIAM 238 (298)
Q Consensus 170 ~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~-----~~~~~~~------~~~~~~~~~~~~~~~dva~ 238 (298)
+++|++++.++++++.|+. ++||++++|.||+++|++..... ..++... ......+..++.+|+|+++
T Consensus 151 ~~sK~a~~~~~~~la~e~~-~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 229 (277)
T PRK06180 151 CGSKFALEGISESLAKEVA-PFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQ 229 (277)
T ss_pred HHHHHHHHHHHHHHHHHhh-hhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHH
Confidence 9999999999999999997 78999999999999887432211 1111111 1112234566789999999
Q ss_pred HHHHhcCCC
Q 022386 239 AALYLASDA 247 (298)
Q Consensus 239 ~~~~L~s~~ 247 (298)
++.+++..+
T Consensus 230 ~~~~~l~~~ 238 (277)
T PRK06180 230 AILAAVESD 238 (277)
T ss_pred HHHHHHcCC
Confidence 999998754
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=247.26 Aligned_cols=214 Identities=21% Similarity=0.223 Sum_probs=184.8
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
+|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+ ++.++.||++++++++++++++.++++.+|
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id 80 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAA-RVSVYAADVRDADALAAAAADFIAAHGLPD 80 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCC-eeEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence 4799999999999999999999999999999999887777766665433 788999999999999999999999999999
Q ss_pred EEEECCCCCCCCCCCC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhH
Q 022386 92 ILVNAAAGNFLVPAED-LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS 170 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~ 170 (298)
++|||+|........+ .+.++++..+++|+.+++.+++.++|.|.+++ .++||++||..+..+.+....|+
T Consensus 81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~ 152 (257)
T PRK07024 81 VVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR--------RGTLVGIASVAGVRGLPGAGAYS 152 (257)
T ss_pred EEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC--------CCEEEEEechhhcCCCCCCcchH
Confidence 9999999754333333 67899999999999999999999999998765 58899999999999988899999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCC
Q 022386 171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 171 ~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~ 247 (298)
+||++++.++++++.|+. ++||++++|+||+++|++..... .+...+.+|+++++.++..+...
T Consensus 153 asK~a~~~~~~~l~~e~~-~~gi~v~~v~Pg~v~t~~~~~~~------------~~~~~~~~~~~~a~~~~~~l~~~ 216 (257)
T PRK07024 153 ASKAAAIKYLESLRVELR-PAGVRVVTIAPGYIRTPMTAHNP------------YPMPFLMDADRFAARAARAIARG 216 (257)
T ss_pred HHHHHHHHHHHHHHHHhh-ccCcEEEEEecCCCcCchhhcCC------------CCCCCccCHHHHHHHHHHHHhCC
Confidence 999999999999999997 78999999999999987532211 11123468999999999988653
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-33 Score=248.20 Aligned_cols=274 Identities=15% Similarity=0.080 Sum_probs=202.4
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
|+.+++|+++||||++|||+++++.|+++|++|++++|+.+..++..+++...+.++.++.+|+++.++++++++++.+.
T Consensus 1 m~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 80 (322)
T PRK07453 1 MSQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRAL 80 (322)
T ss_pred CCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 35667999999999999999999999999999999999988888877777544567889999999999999999998877
Q ss_pred hCCccEEEECCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc----
Q 022386 87 FGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT---- 161 (298)
Q Consensus 87 ~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~---- 161 (298)
++++|++|||||+... ....+.+.++++.++++|+.++++++++++|.|++++.+ .++||++||.....
T Consensus 81 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~------~~riV~vsS~~~~~~~~~ 154 (322)
T PRK07453 81 GKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAP------DPRLVILGTVTANPKELG 154 (322)
T ss_pred CCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCC------CceEEEEcccccCccccC
Confidence 7899999999997533 223456889999999999999999999999999876410 26899999965421
Q ss_pred -------------------------------CCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccc-CCccc
Q 022386 162 -------------------------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK-DTAGV 209 (298)
Q Consensus 162 -------------------------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~-t~~~~ 209 (298)
++.+...|+.||.+...+++.+++++....||++++++||+|. |++..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~ 234 (322)
T PRK07453 155 GKIPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFR 234 (322)
T ss_pred CccCCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcccc
Confidence 0123468999999999999999999842468999999999995 65433
Q ss_pred CcCCh-HHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCC--------CCCCCCCchhHHHhhHH
Q 022386 210 SKLAP-EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW--------LSNPRDLPKEAVNQLSR 280 (298)
Q Consensus 210 ~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~--------~~~~~~~~~~~~~~~~~ 280 (298)
..... ......+. ........+++..++.+++++.++....+|..+..+.... -..+....+...++||+
T Consensus 235 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~a~d~~~~~~lw~ 313 (322)
T PRK07453 235 NTPPLFQKLFPWFQ-KNITGGYVSQELAGERVAQVVADPEFAQSGVHWSWGNRQKKDRKAFSQELSDRATDDDKARRLWD 313 (322)
T ss_pred cCCHHHHHHHHHHH-HHHhhceecHHHHhhHHHHhhcCcccCCCCceeecCCCCCcCccccccccchhhcCHHHHHHHHH
Confidence 22110 11111111 1122335678888888888876654456888776322110 11222334566778888
Q ss_pred hhhhccC
Q 022386 281 AVERKSR 287 (298)
Q Consensus 281 ~~~~~~~ 287 (298)
.+++...
T Consensus 314 ~s~~~~~ 320 (322)
T PRK07453 314 LSAKLVG 320 (322)
T ss_pred HHHHHhC
Confidence 7776543
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=245.65 Aligned_cols=257 Identities=22% Similarity=0.248 Sum_probs=209.7
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCC--CCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
|++|+++||||++|||+++++.|+++|++|++++|+.+..++..+.+...+ .++.++.||++|+++++. ++++.+.+
T Consensus 1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~ 79 (280)
T PRK06914 1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI 79 (280)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc
Confidence 468999999999999999999999999999999999887777776665543 468899999999999999 99999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
+++|++|||||....+...+.+.+++++.+++|+.+++.+++.++|+|++.+ .++||++||..+..+.++..
T Consensus 80 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~~iv~vsS~~~~~~~~~~~ 151 (280)
T PRK06914 80 GRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQK--------SGKIINISSISGRVGFPGLS 151 (280)
T ss_pred CCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--------CCEEEEECcccccCCCCCCc
Confidence 9999999999987777777888999999999999999999999999998765 57899999998888888899
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC-----------hHHHHHHHhh--hccCCCCCCHH
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-----------PEEIRSKATD--YMAAYKFGEKW 234 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~-----------~~~~~~~~~~--~~~~~~~~~~~ 234 (298)
.|+.+|++++.++++++.|+. ++||+++.++||+++|+....... .......... ..+.+++.+++
T Consensus 152 ~Y~~sK~~~~~~~~~l~~~~~-~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (280)
T PRK06914 152 PYVSSKYALEGFSESLRLELK-PFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPI 230 (280)
T ss_pred hhHHhHHHHHHHHHHHHHHhh-hhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHH
Confidence 999999999999999999987 789999999999999885432110 0111111111 12446788999
Q ss_pred HHHHHHHHhcCCCCCCccccEEEeCCCCCC--CCCCCCchhHHHhhH
Q 022386 235 DIAMAALYLASDAGKYVNGNTLIVDGGNWL--SNPRDLPKEAVNQLS 279 (298)
Q Consensus 235 dva~~~~~L~s~~~~~~~G~~i~~dgG~~~--~~~~~~~~~~~~~~~ 279 (298)
|+|+++.+++++... +..+.+..+..+ .....+|+.+|+++.
T Consensus 231 dva~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 274 (280)
T PRK06914 231 DVANLIVEIAESKRP---KLRYPIGKGVKLMILAKKILPWRLWEYLV 274 (280)
T ss_pred HHHHHHHHHHcCCCC---CcccccCCchHHHHHHHHhcCHHHHHHHH
Confidence 999999999986433 235666655544 333467887777663
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-33 Score=239.81 Aligned_cols=244 Identities=32% Similarity=0.440 Sum_probs=208.0
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
+|++|||||+++||++++++|+++|++|++++|+.+..+++.+++...+.++.++.+|+++.++++++++.+.+.++++|
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 80 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD 80 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 47999999999999999999999999999999998888888887776667899999999999999999999999999999
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHH
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~ 171 (298)
++||++|........+.++++++++++.|+.+++.+++.+++.|++.. .+++|++||..+..+.+....|+.
T Consensus 81 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~--------~~~~v~~ss~~~~~~~~~~~~y~~ 152 (255)
T TIGR01963 81 ILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG--------WGRIINIASAHGLVASPFKSAYVA 152 (255)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--------CeEEEEEcchhhcCCCCCCchhHH
Confidence 999999977666666778899999999999999999999999998765 578999999988888888899999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC---------ChHHH-HHHHhhhccCCCCCCHHHHHHHHH
Q 022386 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---------APEEI-RSKATDYMAAYKFGEKWDIAMAAL 241 (298)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~---------~~~~~-~~~~~~~~~~~~~~~~~dva~~~~ 241 (298)
+|++++.+++.++.++. +.+|+++.++||++.++...... ..... ...+....+.+.+.+++|++++++
T Consensus 153 sk~a~~~~~~~~~~~~~-~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~ 231 (255)
T TIGR01963 153 AKHGLIGLTKVLALEVA-AHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETAL 231 (255)
T ss_pred HHHHHHHHHHHHHHHhh-hcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHH
Confidence 99999999999999987 67999999999999877532211 00111 111223335567899999999999
Q ss_pred HhcCCCCCCccccEEEeCCCCCC
Q 022386 242 YLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 242 ~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
+++++....++|+.+++|||+..
T Consensus 232 ~~~~~~~~~~~g~~~~~~~g~~~ 254 (255)
T TIGR01963 232 FLASDAAAGITGQAIVLDGGWTA 254 (255)
T ss_pred HHcCccccCccceEEEEcCcccc
Confidence 99987666789999999999753
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=245.38 Aligned_cols=237 Identities=18% Similarity=0.183 Sum_probs=193.9
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
.+|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|.++++++++.+.+.+
T Consensus 2 ~~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 81 (287)
T PRK06194 2 KDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERF 81 (287)
T ss_pred cCCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 45789999999999999999999999999999999999888888888877667778899999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
+++|++|||||....+++.+.+.++|+..+++|+.++++++++++|.|.++.... ....|+||++||..+..+.+...
T Consensus 82 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~--~~~~g~iv~~sS~~~~~~~~~~~ 159 (287)
T PRK06194 82 GAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKD--PAYEGHIVNTASMAGLLAPPAMG 159 (287)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCC--CCCCeEEEEeCChhhccCCCCCc
Confidence 9999999999987777788889999999999999999999999999998764210 01127899999999988888889
Q ss_pred hhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEeCCcccCCcccCcCC-hHH------------HHHHHhhhccCCCCCCH
Q 022386 168 HVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKLA-PEE------------IRSKATDYMAAYKFGEK 233 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~-~~~girv~~i~PG~v~t~~~~~~~~-~~~------------~~~~~~~~~~~~~~~~~ 233 (298)
.|+++|++++.++++++.|+. ...+||++.+.||++.|++...... +.. ...............++
T Consensus 160 ~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 239 (287)
T PRK06194 160 IYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQKAVGSGKVTA 239 (287)
T ss_pred chHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHHHHHHHhhhhccCCCH
Confidence 999999999999999999986 2357999999999998875433211 000 00111111111123699
Q ss_pred HHHHHHHHHhcCC
Q 022386 234 WDIAMAALYLASD 246 (298)
Q Consensus 234 ~dva~~~~~L~s~ 246 (298)
+|+|+.+..++..
T Consensus 240 ~dva~~i~~~~~~ 252 (287)
T PRK06194 240 EEVAQLVFDAIRA 252 (287)
T ss_pred HHHHHHHHHHHHc
Confidence 9999999987743
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-34 Score=243.76 Aligned_cols=235 Identities=22% Similarity=0.266 Sum_probs=190.0
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh-HHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.+|++|+++||||++|||+++++.|+++|++|++++|+.+ ..+...+.++..+.++.++.+|++++++++++++++.+.
T Consensus 2 ~~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (248)
T PRK07806 2 GDLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREE 81 (248)
T ss_pred CCCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 4578999999999999999999999999999999998753 456666667666667889999999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc-----c
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-----T 161 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~-----~ 161 (298)
++.+|++|||||..... .. .+...+++|+.+++++++++.++|.+ .+++|++||..+. .
T Consensus 82 ~~~~d~vi~~ag~~~~~---~~---~~~~~~~vn~~~~~~l~~~~~~~~~~----------~~~iv~isS~~~~~~~~~~ 145 (248)
T PRK07806 82 FGGLDALVLNASGGMES---GM---DEDYAMRLNRDAQRNLARAALPLMPA----------GSRVVFVTSHQAHFIPTVK 145 (248)
T ss_pred CCCCcEEEECCCCCCCC---CC---CcceeeEeeeHHHHHHHHHHHhhccC----------CceEEEEeCchhhcCcccc
Confidence 99999999999864321 11 24567899999999999999999853 3679999986543 2
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccC---cCChHHHHHHHhhhccCCCCCCHHHHHH
Q 022386 162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS---KLAPEEIRSKATDYMAAYKFGEKWDIAM 238 (298)
Q Consensus 162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~dva~ 238 (298)
+.+....|+.||++++.+++.++.|++ +.||+|+.|.||++.++.... ...+... . ....+.+++.+|+|+++
T Consensus 146 ~~~~~~~Y~~sK~a~e~~~~~l~~~~~-~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~dva~ 221 (248)
T PRK07806 146 TMPEYEPVARSKRAGEDALRALRPELA-EKGIGFVVVSGDMIEGTVTATLLNRLNPGAI-E--ARREAAGKLYTVSEFAA 221 (248)
T ss_pred CCccccHHHHHHHHHHHHHHHHHHHhh-ccCeEEEEeCCccccCchhhhhhccCCHHHH-H--HHHhhhcccCCHHHHHH
Confidence 234467899999999999999999997 789999999999998764321 1111111 1 12346778999999999
Q ss_pred HHHHhcCCCCCCccccEEEeCCCCCC
Q 022386 239 AALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 239 ~~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
++.++++ +.+.+|++++++||...
T Consensus 222 ~~~~l~~--~~~~~g~~~~i~~~~~~ 245 (248)
T PRK07806 222 EVARAVT--APVPSGHIEYVGGADYF 245 (248)
T ss_pred HHHHHhh--ccccCccEEEecCccce
Confidence 9999997 46789999999999764
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-33 Score=237.08 Aligned_cols=223 Identities=26% Similarity=0.347 Sum_probs=194.8
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
|.++++++++|||++++||++++++|+++|++|++++|+.+..++..+++...+.++.++.+|++++++++++++++.+.
T Consensus 2 ~~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (239)
T PRK07666 2 AQSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNE 81 (239)
T ss_pred CccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 34578899999999999999999999999999999999988888777777766677889999999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
++++|++|||+|....+++.+.++++|++.+++|+.+++++++++.+.+.++. .+++|++||..+..+.+..
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~~iv~~ss~~~~~~~~~~ 153 (239)
T PRK07666 82 LGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQ--------SGDIINISSTAGQKGAAVT 153 (239)
T ss_pred cCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--------CcEEEEEcchhhccCCCCC
Confidence 99999999999987667777888999999999999999999999999998765 5789999999998888888
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
..|+.+|+++..+++.++.|+. +.||+++.|+||++.|++....... . .....+.+++|+++.+..+++.
T Consensus 154 ~~Y~~sK~a~~~~~~~~a~e~~-~~gi~v~~v~pg~v~t~~~~~~~~~--------~-~~~~~~~~~~~~a~~~~~~l~~ 223 (239)
T PRK07666 154 SAYSASKFGVLGLTESLMQEVR-KHNIRVTALTPSTVATDMAVDLGLT--------D-GNPDKVMQPEDLAEFIVAQLKL 223 (239)
T ss_pred cchHHHHHHHHHHHHHHHHHhh-ccCcEEEEEecCcccCcchhhcccc--------c-cCCCCCCCHHHHHHHHHHHHhC
Confidence 9999999999999999999997 7899999999999988754322111 0 1123467999999999999975
Q ss_pred C
Q 022386 247 A 247 (298)
Q Consensus 247 ~ 247 (298)
.
T Consensus 224 ~ 224 (239)
T PRK07666 224 N 224 (239)
T ss_pred C
Confidence 4
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-33 Score=238.58 Aligned_cols=228 Identities=23% Similarity=0.239 Sum_probs=188.5
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
++++||||++|||.++++.|+++|++|++++|+.+.++++.+.+ +.++.++.+|+++.++++++++++.+.++++|+
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 77 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDV 77 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---ccceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 47999999999999999999999999999999987666555443 456888999999999999999999999999999
Q ss_pred EEECCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHH
Q 022386 93 LVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (298)
Q Consensus 93 li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~ 171 (298)
+|||||... ..+..+.+.++|++++++|+.+++.+++.++++|.+.+ .++||++||..+..+.+....|+.
T Consensus 78 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~~ 149 (248)
T PRK10538 78 LVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN--------HGHIINIGSTAGSWPYAGGNVYGA 149 (248)
T ss_pred EEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--------CcEEEEECCcccCCCCCCCchhHH
Confidence 999999753 35566778999999999999999999999999998765 578999999988888888889999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc-C-ChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCCC
Q 022386 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK-L-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK 249 (298)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~ 249 (298)
+|++++.+++.++.++. ++||+++.|.||++.+++.... . ..+... ........+.+|+|+|++++||++....
T Consensus 150 sK~~~~~~~~~l~~~~~-~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~dvA~~~~~l~~~~~~ 225 (248)
T PRK10538 150 TKAFVRQFSLNLRTDLH-GTAVRVTDIEPGLVGGTEFSNVRFKGDDGKA---EKTYQNTVALTPEDVSEAVWWVATLPAH 225 (248)
T ss_pred HHHHHHHHHHHHHHHhc-CCCcEEEEEeCCeecccccchhhccCcHHHH---HhhccccCCCCHHHHHHHHHHHhcCCCc
Confidence 99999999999999997 7899999999999985543221 1 111111 1111223457999999999999987666
Q ss_pred CccccE
Q 022386 250 YVNGNT 255 (298)
Q Consensus 250 ~~~G~~ 255 (298)
+.+++.
T Consensus 226 ~~~~~~ 231 (248)
T PRK10538 226 VNINTL 231 (248)
T ss_pred ccchhh
Confidence 555544
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-33 Score=235.36 Aligned_cols=237 Identities=34% Similarity=0.466 Sum_probs=205.3
Q ss_pred EEEecCCchhHHHHHHHHHHcCCcEEEEcCCh-hHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 022386 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (298)
Q Consensus 15 ~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l 93 (298)
++|||++++||.+++++|+++|++|++++|+. +..+...+.+.+.+.++.++.||++|+++++++++.+.+.++++|++
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 58999999999999999999999999998875 45556666777667788999999999999999999999999999999
Q ss_pred EECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHHHH
Q 022386 94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAK 173 (298)
Q Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK 173 (298)
||++|.....+..+.+.+.+++.+++|+.+++.+++.+.+++.+.. .+++|++||..+..+.+.+..|+.+|
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~~~v~~sS~~~~~g~~~~~~y~~~k 152 (239)
T TIGR01830 81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQR--------SGRIINISSVVGLMGNAGQANYAASK 152 (239)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--------CeEEEEECCccccCCCCCCchhHHHH
Confidence 9999987666666778899999999999999999999999997654 57899999998888888899999999
Q ss_pred HHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCCCCccc
Q 022386 174 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNG 253 (298)
Q Consensus 174 ~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G 253 (298)
++++.++++++.++. ..|++++.+.||+++++.... . +...........+..++.+++|+++.+++++.+...+++|
T Consensus 153 ~a~~~~~~~l~~~~~-~~g~~~~~i~pg~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g 229 (239)
T TIGR01830 153 AGVIGFTKSLAKELA-SRNITVNAVAPGFIDTDMTDK-L-SEKVKKKILSQIPLGRFGTPEEVANAVAFLASDEASYITG 229 (239)
T ss_pred HHHHHHHHHHHHHHh-hcCeEEEEEEECCCCChhhhh-c-ChHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCcccCCcCC
Confidence 999999999999987 679999999999998764322 1 2333344455667788999999999999999887788999
Q ss_pred cEEEeCCCC
Q 022386 254 NTLIVDGGN 262 (298)
Q Consensus 254 ~~i~~dgG~ 262 (298)
+.+++++|.
T Consensus 230 ~~~~~~~g~ 238 (239)
T TIGR01830 230 QVIHVDGGM 238 (239)
T ss_pred CEEEeCCCc
Confidence 999999985
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-35 Score=225.16 Aligned_cols=247 Identities=26% Similarity=0.376 Sum_probs=214.2
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
-+.+|-+++||||.+|+|++.+++|+++|+.|++.+-.+++.++.++++ +.++.|...|+++++++..++.....+|
T Consensus 5 rs~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel---g~~~vf~padvtsekdv~aala~ak~kf 81 (260)
T KOG1199|consen 5 RSTKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL---GGKVVFTPADVTSEKDVRAALAKAKAKF 81 (260)
T ss_pred hhhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh---CCceEEeccccCcHHHHHHHHHHHHhhc
Confidence 3567889999999999999999999999999999999988888887776 7789999999999999999999999999
Q ss_pred CCccEEEECCCCCCC------CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc
Q 022386 88 GKLDILVNAAAGNFL------VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 161 (298)
Q Consensus 88 ~~id~li~~ag~~~~------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~ 161 (298)
|++|.+|||||+... +.-...+.|++++.+++|+.|+|++++...-.|.++. +.....+|.||+..|.+++.
T Consensus 82 grld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~ne--pdq~gqrgviintasvaafd 159 (260)
T KOG1199|consen 82 GRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENE--PDQNGQRGVIINTASVAAFD 159 (260)
T ss_pred cceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCC--CCCCCcceEEEeeceeeeec
Confidence 999999999996422 2333457899999999999999999999999998754 33455689999999999999
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccC-CCCCCHHHHHHHH
Q 022386 162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA-YKFGEKWDIAMAA 240 (298)
Q Consensus 162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~ 240 (298)
+-.++.+|++||.++.+|+--++++++ ..|||++.|.||.++||+..+ .++....-+...+|+ .|++.|.|.+..+
T Consensus 160 gq~gqaaysaskgaivgmtlpiardla-~~gir~~tiapglf~tpllss--lpekv~~fla~~ipfpsrlg~p~eyahlv 236 (260)
T KOG1199|consen 160 GQTGQAAYSASKGAIVGMTLPIARDLA-GDGIRFNTIAPGLFDTPLLSS--LPEKVKSFLAQLIPFPSRLGHPHEYAHLV 236 (260)
T ss_pred CccchhhhhcccCceEeeechhhhhcc-cCceEEEeecccccCChhhhh--hhHHHHHHHHHhCCCchhcCChHHHHHHH
Confidence 999999999999999999999999998 889999999999999886433 345555556666666 4789999999999
Q ss_pred HHhcCCCCCCccccEEEeCCCCCC
Q 022386 241 LYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 241 ~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
-.+.. ..+++|++|.+||-..+
T Consensus 237 qaiie--np~lngevir~dgalrm 258 (260)
T KOG1199|consen 237 QAIIE--NPYLNGEVIRFDGALRM 258 (260)
T ss_pred HHHHh--CcccCCeEEEecceecC
Confidence 88885 47999999999997544
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-33 Score=240.47 Aligned_cols=237 Identities=17% Similarity=0.191 Sum_probs=193.0
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh-hHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc-
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL- 90 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i- 90 (298)
|+++||||++|||++++++|+++|++|++++|+. +.+++. ....+.++.++.+|++++++++++++++...++..
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 78 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKL---AEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDN 78 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHH---HhccCCceEEEEecCCCHHHHHHHHHHHHHhcCccc
Confidence 6899999999999999999999999999999986 333322 22335678899999999999999999988776532
Q ss_pred -c--EEEECCCCC-CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 91 -D--ILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 91 -d--~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
+ ++|+|+|.. ...++.+.+.++|.+.+++|+.+++.+++.++++|++.+. .++||++||..+..+.+..
T Consensus 79 ~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~ 151 (251)
T PRK06924 79 VSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKV-------DKRVINISSGAAKNPYFGW 151 (251)
T ss_pred CCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCC-------CceEEEecchhhcCCCCCc
Confidence 2 899999975 3467778899999999999999999999999999986421 4789999999998888889
Q ss_pred hhhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEeCCcccCCcccCcC--ChH--HHHHHHhhhccCCCCCCHHHHHHHHH
Q 022386 167 IHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKL--APE--EIRSKATDYMAAYKFGEKWDIAMAAL 241 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~-~~~girv~~i~PG~v~t~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~dva~~~~ 241 (298)
..|+++|++++.+++.++.|++ .++||+|++|.||+++|++..... ..+ ...+.+....+.+++.+|+|+|+.++
T Consensus 152 ~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~ 231 (251)
T PRK06924 152 SAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGKLLSPEYVAKALR 231 (251)
T ss_pred HHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCCcCCHHHHHHHHH
Confidence 9999999999999999999974 246899999999999987543210 011 11223334446678899999999999
Q ss_pred HhcCCCCCCccccEEEeCC
Q 022386 242 YLASDAGKYVNGNTLIVDG 260 (298)
Q Consensus 242 ~L~s~~~~~~~G~~i~~dg 260 (298)
+|+++. .+++|+.+.+|+
T Consensus 232 ~l~~~~-~~~~G~~~~v~~ 249 (251)
T PRK06924 232 NLLETE-DFPNGEVIDIDE 249 (251)
T ss_pred HHHhcc-cCCCCCEeehhh
Confidence 999874 789999998875
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-33 Score=224.53 Aligned_cols=247 Identities=24% Similarity=0.260 Sum_probs=215.9
Q ss_pred CCCCCCcEEEEecCC--chhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t--~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
+..|+||++||+|-. +.|+..||+.|.++|+++.++..+. ++++-.+++.+.-+....++||+++.++++++|+++.
T Consensus 1 ~g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~ 79 (259)
T COG0623 1 MGLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIK 79 (259)
T ss_pred CCccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHH
Confidence 467999999999976 8999999999999999999999886 5555555554443345678999999999999999999
Q ss_pred HHhCCccEEEECCCCCC----CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc
Q 022386 85 NHFGKLDILVNAAAGNF----LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 160 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~ 160 (298)
+++|++|++||+-++.+ .+++.+.+.+.|...+++...+...+.+++.|.|.+ +|+||.++-..+.
T Consensus 80 ~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~----------ggSiltLtYlgs~ 149 (259)
T COG0623 80 KKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN----------GGSILTLTYLGSE 149 (259)
T ss_pred HhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC----------CCcEEEEEeccce
Confidence 99999999999999865 367778899999999999999999999999999986 6889999888888
Q ss_pred cCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHH
Q 022386 161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240 (298)
Q Consensus 161 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 240 (298)
+..|.+..-+++|++++.-+|-+|.+++ +.|||||+|+-|+++|-....--.-.....+.....|+++-.+.|||++..
T Consensus 150 r~vPnYNvMGvAKAaLEasvRyLA~dlG-~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl~r~vt~eeVG~tA 228 (259)
T COG0623 150 RVVPNYNVMGVAKAALEASVRYLAADLG-KEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLRRNVTIEEVGNTA 228 (259)
T ss_pred eecCCCchhHHHHHHHHHHHHHHHHHhC-ccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCccCCCCHHHhhhhH
Confidence 8888888889999999999999999998 889999999999999753333323355666777888999999999999999
Q ss_pred HHhcCCCCCCccccEEEeCCCCCCC
Q 022386 241 LYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 241 ~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
+||+|+-++-+||+++.+|+|+++.
T Consensus 229 ~fLlSdLssgiTGei~yVD~G~~i~ 253 (259)
T COG0623 229 AFLLSDLSSGITGEIIYVDSGYHIM 253 (259)
T ss_pred HHHhcchhcccccceEEEcCCceee
Confidence 9999999999999999999999984
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-33 Score=247.42 Aligned_cols=211 Identities=20% Similarity=0.223 Sum_probs=174.8
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC--CCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
.|++++||||++|||+++|++|+++|++|++++|+.++++++.+++.+. +.++..+.+|+++ ++.+.++++.+.++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~~ 129 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETIE 129 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHhc
Confidence 5899999999999999999999999999999999999999988888664 2467888999995 23333444444444
Q ss_pred --CccEEEECCCCCCC--CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc-C-
Q 022386 89 --KLDILVNAAAGNFL--VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-A- 162 (298)
Q Consensus 89 --~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~-~- 162 (298)
++|++|||||+... ..+.+.+.+++++++++|+.+++.++++++|.|.+++ .|+||++||..+.. +
T Consensus 130 ~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~--------~g~IV~iSS~a~~~~~~ 201 (320)
T PLN02780 130 GLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK--------KGAIINIGSGAAIVIPS 201 (320)
T ss_pred CCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC--------CcEEEEEechhhccCCC
Confidence 46699999997643 4577889999999999999999999999999998765 68999999998864 3
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHH
Q 022386 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (298)
Q Consensus 163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 242 (298)
.|....|++||++++.++++++.|++ ++||+|++|+||+++|++..... ... ...+|+++|+.++.
T Consensus 202 ~p~~~~Y~aSKaal~~~~~~L~~El~-~~gI~V~~v~PG~v~T~~~~~~~------------~~~-~~~~p~~~A~~~~~ 267 (320)
T PLN02780 202 DPLYAVYAATKAYIDQFSRCLYVEYK-KSGIDVQCQVPLYVATKMASIRR------------SSF-LVPSSDGYARAALR 267 (320)
T ss_pred CccchHHHHHHHHHHHHHHHHHHHHh-ccCeEEEEEeeCceecCcccccC------------CCC-CCCCHHHHHHHHHH
Confidence 57789999999999999999999997 78999999999999988643110 011 14589999999988
Q ss_pred hcC
Q 022386 243 LAS 245 (298)
Q Consensus 243 L~s 245 (298)
.+.
T Consensus 268 ~~~ 270 (320)
T PLN02780 268 WVG 270 (320)
T ss_pred HhC
Confidence 884
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-32 Score=237.07 Aligned_cols=230 Identities=21% Similarity=0.277 Sum_probs=193.8
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
.+..|+++||||+++||+++++.|+++|++|++++|+.+.+++..+.+...+.++.++.+|++++++++++++++.+.++
T Consensus 7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 86 (274)
T PRK07775 7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALG 86 (274)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 46779999999999999999999999999999999988777777777766677788999999999999999999999899
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchh
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~ 168 (298)
++|++|||||.....+..+.+.+.+++.+++|+.+++++++++++.|.++. .++||++||..+..+.+....
T Consensus 87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~--------~g~iv~isS~~~~~~~~~~~~ 158 (274)
T PRK07775 87 EIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERR--------RGDLIFVGSDVALRQRPHMGA 158 (274)
T ss_pred CCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--------CceEEEECChHhcCCCCCcch
Confidence 999999999987666777788999999999999999999999999998754 578999999988888888889
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCCh--HHHHHHHhh--hccCCCCCCHHHHHHHHHHhc
Q 022386 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP--EEIRSKATD--YMAAYKFGEKWDIAMAALYLA 244 (298)
Q Consensus 169 Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~dva~~~~~L~ 244 (298)
|+.+|++++.+++.++.++. +.||++++|+||+++|+........ ......... ....+++.+++|+++++++++
T Consensus 159 Y~~sK~a~~~l~~~~~~~~~-~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~ 237 (274)
T PRK07775 159 YGAAKAGLEAMVTNLQMELE-GTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLARAITFVA 237 (274)
T ss_pred HHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhcccccccccCHHHHHHHHHHHh
Confidence 99999999999999999987 7799999999999988754321111 111111111 112356889999999999999
Q ss_pred CCC
Q 022386 245 SDA 247 (298)
Q Consensus 245 s~~ 247 (298)
+..
T Consensus 238 ~~~ 240 (274)
T PRK07775 238 ETP 240 (274)
T ss_pred cCC
Confidence 754
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-33 Score=242.45 Aligned_cols=222 Identities=21% Similarity=0.227 Sum_probs=183.7
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh-CC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GK 89 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-~~ 89 (298)
.+|+++||||++|||+++++.|+++|++|++++|+.+.++++. +. .+.++.+|++|.++++++++.+.+.+ ++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~----~~--~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~ 76 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALE----AE--GLEAFQLDYAEPESIAALVAQVLELSGGR 76 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----HC--CceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 3689999999999999999999999999999999977655433 22 36788999999999999999997776 68
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhh
Q 022386 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 169 (298)
Q Consensus 90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y 169 (298)
+|++|||||....+++.+.+.++++..+++|+.|++.+++.++|.|.+.+ .|+||++||..+..+.+....|
T Consensus 77 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y 148 (277)
T PRK05993 77 LDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG--------QGRIVQCSSILGLVPMKYRGAY 148 (277)
T ss_pred ccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC--------CCEEEEECChhhcCCCCccchH
Confidence 99999999988778888889999999999999999999999999998865 5889999999998888889999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC-------------hHHHH---HHHhh-hccCCCCCC
Q 022386 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-------------PEEIR---SKATD-YMAAYKFGE 232 (298)
Q Consensus 170 ~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~-------------~~~~~---~~~~~-~~~~~~~~~ 232 (298)
++||++++.++++++.|+. ++||+|+.|+||+++|++...... .+... ..... ..+.....+
T Consensus 149 ~asK~a~~~~~~~l~~el~-~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (277)
T PRK05993 149 NASKFAIEGLSLTLRMELQ-GSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLG 227 (277)
T ss_pred HHHHHHHHHHHHHHHHHhh-hhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCC
Confidence 9999999999999999997 889999999999999886432110 00000 00111 112223468
Q ss_pred HHHHHHHHHHhcCCC
Q 022386 233 KWDIAMAALYLASDA 247 (298)
Q Consensus 233 ~~dva~~~~~L~s~~ 247 (298)
|+++++.++..+...
T Consensus 228 ~~~va~~i~~a~~~~ 242 (277)
T PRK05993 228 PEAVYAVLLHALTAP 242 (277)
T ss_pred HHHHHHHHHHHHcCC
Confidence 999999999988653
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-33 Score=239.13 Aligned_cols=221 Identities=21% Similarity=0.280 Sum_probs=190.6
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
++++++++||||++|||++++++|+++|++|++++|+.+.+++..+++ ..+.++.++.+|++|.++++++++.+.+ ++
T Consensus 2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~~ 79 (263)
T PRK09072 2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-PYPGRHRWVVADLTSEAGREAVLARARE-MG 79 (263)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHHHh-cC
Confidence 568999999999999999999999999999999999988887777777 4456788999999999999999998876 79
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchh
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~ 168 (298)
++|++|||||.....++.+.+.+++++.+++|+.+++++++.++++|.++. .++||+++|..+..+.+....
T Consensus 80 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~ 151 (263)
T PRK09072 80 GINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQP--------SAMVVNVGSTFGSIGYPGYAS 151 (263)
T ss_pred CCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC--------CCEEEEecChhhCcCCCCccH
Confidence 999999999987667778889999999999999999999999999998764 588999999998888888899
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCC
Q 022386 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 169 Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~ 247 (298)
|+.+|+++..++++++.|+. +.||+|+.++||+++|++..... ..... ....+..+++|+|+.+++++...
T Consensus 152 Y~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~Pg~~~t~~~~~~~------~~~~~-~~~~~~~~~~~va~~i~~~~~~~ 222 (263)
T PRK09072 152 YCASKFALRGFSEALRRELA-DTGVRVLYLAPRATRTAMNSEAV------QALNR-ALGNAMDDPEDVAAAVLQAIEKE 222 (263)
T ss_pred HHHHHHHHHHHHHHHHHHhc-ccCcEEEEEecCcccccchhhhc------ccccc-cccCCCCCHHHHHHHHHHHHhCC
Confidence 99999999999999999997 78999999999999987532211 00001 11235779999999999999753
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-34 Score=223.85 Aligned_cols=185 Identities=24% Similarity=0.258 Sum_probs=167.9
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
.+.|.|+|||||++|||+++|++|.+.|.+|++++|+.+.+++..+.. ..+....||+.|.++.+++++++.++|+
T Consensus 2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~----p~~~t~v~Dv~d~~~~~~lvewLkk~~P 77 (245)
T COG3967 2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN----PEIHTEVCDVADRDSRRELVEWLKKEYP 77 (245)
T ss_pred cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC----cchheeeecccchhhHHHHHHHHHhhCC
Confidence 467999999999999999999999999999999999998887766654 4577889999999999999999999999
Q ss_pred CccEEEECCCCCCCCCCC--CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 89 KLDILVNAAAGNFLVPAE--DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
.++++|||||+-..-.+. +...++.++.+.+|+.++.++++.|+|++.+++ .+.||+|||..++.|....
T Consensus 78 ~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~--------~a~IInVSSGLafvPm~~~ 149 (245)
T COG3967 78 NLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQP--------EATIINVSSGLAFVPMAST 149 (245)
T ss_pred chheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCC--------CceEEEeccccccCccccc
Confidence 999999999986543333 335677899999999999999999999999987 6889999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCC
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT 206 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~ 206 (298)
+.||++|+|++.++.+|+.++. ..+|+|.-+.|-.|+|+
T Consensus 150 PvYcaTKAaiHsyt~aLR~Qlk-~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 150 PVYCATKAAIHSYTLALREQLK-DTSVEVIELAPPLVDTT 188 (245)
T ss_pred ccchhhHHHHHHHHHHHHHHhh-hcceEEEEecCCceecC
Confidence 9999999999999999999997 77899999999999986
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-33 Score=237.53 Aligned_cols=220 Identities=20% Similarity=0.178 Sum_probs=179.6
Q ss_pred cEEEEecCCchhHHHHHHHHHHcC--CcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
|+++||||++|||++++++|+++| +.|++..|+... + ....++.+++||+++.++++++. +.++++
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~--~------~~~~~~~~~~~Dls~~~~~~~~~----~~~~~i 68 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP--D------FQHDNVQWHALDVTDEAEIKQLS----EQFTQL 68 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc--c------cccCceEEEEecCCCHHHHHHHH----HhcCCC
Confidence 579999999999999999999985 556666665431 1 12356889999999999988854 456899
Q ss_pred cEEEECCCCCC------CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc---
Q 022386 91 DILVNAAAGNF------LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT--- 161 (298)
Q Consensus 91 d~li~~ag~~~------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~--- 161 (298)
|++|||||... ..++.+.+.+.|++.+++|+.+++.+++.++|.|++++ .++++++||..+..
T Consensus 69 d~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~--------~~~i~~iss~~~~~~~~ 140 (235)
T PRK09009 69 DWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSE--------SAKFAVISAKVGSISDN 140 (235)
T ss_pred CEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccC--------CceEEEEeecccccccC
Confidence 99999999753 24566778899999999999999999999999998654 57899998865532
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHhcCC--CCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHH
Q 022386 162 ATWYQIHVSAAKAAVDSITRSLALEWGTD--YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239 (298)
Q Consensus 162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~--~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (298)
+.+.+..|+++|++++.|+++++.|+. + .||+|++|.||+++|++.... ....+.+++.+|+|+++.
T Consensus 141 ~~~~~~~Y~asK~a~~~~~~~la~e~~-~~~~~i~v~~v~PG~v~t~~~~~~----------~~~~~~~~~~~~~~~a~~ 209 (235)
T PRK09009 141 RLGGWYSYRASKAALNMFLKTLSIEWQ-RSLKHGVVLALHPGTTDTALSKPF----------QQNVPKGKLFTPEYVAQC 209 (235)
T ss_pred CCCCcchhhhhHHHHHHHHHHHHHHhh-cccCCeEEEEEcccceecCCCcch----------hhccccCCCCCHHHHHHH
Confidence 235677999999999999999999986 4 589999999999998865321 122355668899999999
Q ss_pred HHHhcCCCCCCccccEEEeCCCCC
Q 022386 240 ALYLASDAGKYVNGNTLIVDGGNW 263 (298)
Q Consensus 240 ~~~L~s~~~~~~~G~~i~~dgG~~ 263 (298)
+++++++.+.+.+|+.+.+|||..
T Consensus 210 ~~~l~~~~~~~~~g~~~~~~g~~~ 233 (235)
T PRK09009 210 LLGIIANATPAQSGSFLAYDGETL 233 (235)
T ss_pred HHHHHHcCChhhCCcEEeeCCcCC
Confidence 999999988899999999999853
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-32 Score=233.65 Aligned_cols=241 Identities=34% Similarity=0.481 Sum_probs=197.8
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhH--HHHHHHHHHhCC-CCeEEEEccCCC-HHHHHHHHHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV--LRSAVAALHSLG-IPAIGLEGDVRK-REDAVRVVESTI 84 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~--~~~~~~~~~~~~-~~~~~~~~Dls~-~~~~~~~~~~~~ 84 (298)
++.+|+++||||++|||+++|+.|+++|+.|+++.++.+. .+...+.....+ ..+.+..+|+++ .++++.+++.+.
T Consensus 2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~ 81 (251)
T COG1028 2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE 81 (251)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence 6789999999999999999999999999999988887654 333433333122 357788899998 999999999999
Q ss_pred HHhCCccEEEECCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 85 NHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
+.+|++|++|||||.... .++.+.+.++|++.+++|+.+++.+++++.|.+++ . +||++||..+. +.
T Consensus 82 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~----------~-~Iv~isS~~~~-~~ 149 (251)
T COG1028 82 EEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKK----------Q-RIVNISSVAGL-GG 149 (251)
T ss_pred HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhh----------C-eEEEECCchhc-CC
Confidence 999999999999998776 48888899999999999999999999988888883 3 69999999998 77
Q ss_pred CC-chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHH-HHHHhhhccCCCCCCHHHHHHHHH
Q 022386 164 WY-QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI-RSKATDYMAAYKFGEKWDIAMAAL 241 (298)
Q Consensus 164 ~~-~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~dva~~~~ 241 (298)
+. ...|++||+|+.+|++.++.|+. ++||++++|+||++.|++.......... ........+..++..|++++..+.
T Consensus 150 ~~~~~~Y~~sK~al~~~~~~l~~e~~-~~gi~v~~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (251)
T COG1028 150 PPGQAAYAASKAALIGLTKALALELA-PRGIRVNAVAPGYIDTPMTAALESAELEALKRLAARIPLGRLGTPEEVAAAVA 228 (251)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHh-hhCcEEEEEEeccCCCcchhhhhhhhhhHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 77 49999999999999999999997 7899999999999998765543222100 111111115557889999999999
Q ss_pred HhcCCC-CCCccccEEEeCCCC
Q 022386 242 YLASDA-GKYVNGNTLIVDGGN 262 (298)
Q Consensus 242 ~L~s~~-~~~~~G~~i~~dgG~ 262 (298)
|+.+.. ..+++|+.+.+|||.
T Consensus 229 ~~~~~~~~~~~~g~~~~~~~~~ 250 (251)
T COG1028 229 FLASDEAASYITGQTLPVDGGL 250 (251)
T ss_pred HHcCcchhccccCCEEEeCCCC
Confidence 998764 678999999988885
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-33 Score=237.00 Aligned_cols=214 Identities=19% Similarity=0.175 Sum_probs=179.6
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcC-CcEEEEcCChhH-HHHHHHHHHhCCC-CeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTV-LRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G-~~Vv~~~r~~~~-~~~~~~~~~~~~~-~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
++|+++||||++|||+++|++|+++| ++|++++|+.+. +++..+++...+. ++.+++||++|+++++++++++.+ +
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~ 85 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-G 85 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-c
Confidence 47899999999999999999999995 899999999875 7777777776543 789999999999999999999886 5
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
+++|++|||+|..........+.++..+++++|+.+++.+++.++|.|.+++ .++||++||..+..+.+...
T Consensus 86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~--------~~~iv~isS~~g~~~~~~~~ 157 (253)
T PRK07904 86 GDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG--------FGQIIAMSSVAGERVRRSNF 157 (253)
T ss_pred CCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC--------CceEEEEechhhcCCCCCCc
Confidence 8999999999975332212224556668899999999999999999999875 58999999998877777788
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~ 247 (298)
.|++||+++.+|+++++.|+. ++||+|+.|+||+++|++..... ......+++|+|+.+...+...
T Consensus 158 ~Y~~sKaa~~~~~~~l~~el~-~~~i~v~~v~Pg~v~t~~~~~~~-------------~~~~~~~~~~~A~~i~~~~~~~ 223 (253)
T PRK07904 158 VYGSTKAGLDGFYLGLGEALR-EYGVRVLVVRPGQVRTRMSAHAK-------------EAPLTVDKEDVAKLAVTAVAKG 223 (253)
T ss_pred chHHHHHHHHHHHHHHHHHHh-hcCCEEEEEeeCceecchhccCC-------------CCCCCCCHHHHHHHHHHHHHcC
Confidence 999999999999999999997 78999999999999987543211 1122468999999999988653
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-33 Score=239.35 Aligned_cols=220 Identities=26% Similarity=0.284 Sum_probs=185.8
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
++++++||||+||||++++++|+++|++|++++|+.+..+. ..++.+++||++|+++++++++.+.+.++++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~ 74 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP--------IPGVELLELDVTDDASVQAAVDEVIARAGRI 74 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc--------cCCCeeEEeecCCHHHHHHHHHHHHHhCCCC
Confidence 57899999999999999999999999999999998654321 2357889999999999999999999999999
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhH
Q 022386 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS 170 (298)
Q Consensus 91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~ 170 (298)
|++|||||....+++.+.+.+++++.+++|+.+++.+++.++|+|++++ .++||++||..+..+.+....|+
T Consensus 75 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~ 146 (270)
T PRK06179 75 DVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG--------SGRIINISSVLGFLPAPYMALYA 146 (270)
T ss_pred CEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--------CceEEEECCccccCCCCCccHHH
Confidence 9999999987777888889999999999999999999999999998865 68999999999988888889999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCCh----H---HHHHHHh--hhccCCCCCCHHHHHHHHH
Q 022386 171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP----E---EIRSKAT--DYMAAYKFGEKWDIAMAAL 241 (298)
Q Consensus 171 ~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~----~---~~~~~~~--~~~~~~~~~~~~dva~~~~ 241 (298)
++|++++.++++++.|++ ++||+++.|.||+++|+........ . ....... ......+..+|+++++.++
T Consensus 147 ~sK~a~~~~~~~l~~el~-~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~ 225 (270)
T PRK06179 147 ASKHAVEGYSESLDHEVR-QFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVV 225 (270)
T ss_pred HHHHHHHHHHHHHHHHHh-hhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHHH
Confidence 999999999999999997 7899999999999998754322110 0 0001111 1123455679999999999
Q ss_pred HhcCCC
Q 022386 242 YLASDA 247 (298)
Q Consensus 242 ~L~s~~ 247 (298)
+++...
T Consensus 226 ~~~~~~ 231 (270)
T PRK06179 226 KAALGP 231 (270)
T ss_pred HHHcCC
Confidence 999764
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-32 Score=234.26 Aligned_cols=219 Identities=26% Similarity=0.211 Sum_probs=186.6
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH-hCCcc
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH-FGKLD 91 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~-~~~id 91 (298)
|+++||||++|||++++++|+++|++|++++|+.+.++++...+. +.++.+++||+++.++++++++.+.+. ++++|
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id 79 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG--AGNAWTGALDVTDRAAWDAALADFAAATGGRLD 79 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCC
Confidence 789999999999999999999999999999999877776655554 457889999999999999999988776 78999
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHH
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~ 171 (298)
++|||||......+.+.+.+++++.+++|+.+++.+++++.++|++.+ .++||++||..+..+.+....|+.
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~~ 151 (260)
T PRK08267 80 VLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATP--------GARVINTSSASAIYGQPGLAVYSA 151 (260)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--------CCEEEEeCchhhCcCCCCchhhHH
Confidence 999999987777788889999999999999999999999999998765 688999999999888888999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
||++++.++++++.++. +.||++++|.||+++|++..... .+..... .. ......+++++++.+..++..
T Consensus 152 sKaa~~~~~~~l~~~~~-~~~i~v~~i~pg~~~t~~~~~~~-~~~~~~~-~~--~~~~~~~~~~va~~~~~~~~~ 221 (260)
T PRK08267 152 TKFAVRGLTEALDLEWR-RHGIRVADVMPLFVDTAMLDGTS-NEVDAGS-TK--RLGVRLTPEDVAEAVWAAVQH 221 (260)
T ss_pred HHHHHHHHHHHHHHHhc-ccCcEEEEEecCCcCCccccccc-chhhhhh-Hh--hccCCCCHHHHHHHHHHHHhC
Confidence 99999999999999997 77999999999999987654311 1111111 11 123356899999999999854
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-31 Score=229.43 Aligned_cols=213 Identities=21% Similarity=0.228 Sum_probs=186.3
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC--CCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
+|+++||||++|||++++++|+++|++|++++|+.++.++..+.+.+. +.++.+++||++++++++++++++.+.+++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 689999999999999999999999999999999988888877777654 457889999999999999999999999999
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC-chh
Q 022386 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIH 168 (298)
Q Consensus 90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~-~~~ 168 (298)
+|++|||||+....++.+.+.+.+++.+++|+.+++.+++.+++.|++.+ .++||++||..+..+.+. ...
T Consensus 82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~~ 153 (248)
T PRK08251 82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG--------SGHLVLISSVSAVRGLPGVKAA 153 (248)
T ss_pred CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--------CCeEEEEeccccccCCCCCccc
Confidence 99999999987777777778899999999999999999999999998765 578999999988877764 678
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 169 Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
|+.||++++.+++.++.++. ..||+++.|+||+++|++..... ......+++++++.++..+..
T Consensus 154 Y~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~pg~v~t~~~~~~~-------------~~~~~~~~~~~a~~i~~~~~~ 217 (248)
T PRK08251 154 YAASKAGVASLGEGLRAELA-KTPIKVSTIEPGYIRSEMNAKAK-------------STPFMVDTETGVKALVKAIEK 217 (248)
T ss_pred HHHHHHHHHHHHHHHHHHhc-ccCcEEEEEecCcCcchhhhccc-------------cCCccCCHHHHHHHHHHHHhc
Confidence 99999999999999999997 67999999999999987543211 112357899999999888754
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-31 Score=227.04 Aligned_cols=235 Identities=26% Similarity=0.330 Sum_probs=195.2
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
+|++|+++||||+++||.++++.|+++|++|++++|+.+..+...+.+.+. .++.++.||+++.++++++++++...++
T Consensus 2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 80 (238)
T PRK05786 2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY-GNIHYVVGDVSSTESARNVIEKAAKVLN 80 (238)
T ss_pred CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 478999999999999999999999999999999999988777766666543 3688899999999999999999988889
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc-cCCCCch
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQI 167 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~-~~~~~~~ 167 (298)
++|.+|+++|.....+.. +.++++..+++|+.+++.+.+.++|.+.+ ++++|++||..+. .+.+...
T Consensus 81 ~id~ii~~ag~~~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~----------~~~iv~~ss~~~~~~~~~~~~ 148 (238)
T PRK05786 81 AIDGLVVTVGGYVEDTVE--EFSGLEEMLTNHIKIPLYAVNASLRFLKE----------GSSIVLVSSMSGIYKASPDQL 148 (238)
T ss_pred CCCEEEEcCCCcCCCchH--HHHHHHHHHHHhchHHHHHHHHHHHHHhc----------CCEEEEEecchhcccCCCCch
Confidence 999999999865443333 34889999999999999999999999864 4779999988764 3556678
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~ 247 (298)
.|+.||++++.+++.++.++. +.||+++.|.||+++|++... .. ..... .....+.+++|+++.+.+++++.
T Consensus 149 ~Y~~sK~~~~~~~~~~~~~~~-~~gi~v~~i~pg~v~~~~~~~----~~-~~~~~--~~~~~~~~~~~va~~~~~~~~~~ 220 (238)
T PRK05786 149 SYAVAKAGLAKAVEILASELL-GRGIRVNGIAPTTISGDFEPE----RN-WKKLR--KLGDDMAPPEDFAKVIIWLLTDE 220 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCccCCCCCch----hh-hhhhc--cccCCCCCHHHHHHHHHHHhccc
Confidence 899999999999999999997 779999999999999864311 11 11111 11224679999999999999988
Q ss_pred CCCccccEEEeCCCCCC
Q 022386 248 GKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 248 ~~~~~G~~i~~dgG~~~ 264 (298)
+.+++|+.+.+|||..+
T Consensus 221 ~~~~~g~~~~~~~~~~~ 237 (238)
T PRK05786 221 ADWVDGVVIPVDGGARL 237 (238)
T ss_pred ccCccCCEEEECCcccc
Confidence 88999999999999765
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-32 Score=232.37 Aligned_cols=224 Identities=27% Similarity=0.352 Sum_probs=190.9
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
+++++||||++|||+++++.|+++|++|++++|+....++..+.+...+.++.++.+|++++++++++++.+.+.++++|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 47899999999999999999999999999999998877777777777677788999999999999999999999999999
Q ss_pred EEEECCCCCCCCCCCCC-CHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhH
Q 022386 92 ILVNAAAGNFLVPAEDL-SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS 170 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~ 170 (298)
++|||+|.....++.+. +.+.+.+.+++|+.+++.+++.+.++|.+. .+++|++||..+..+.++...|+
T Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~---------~~~iv~~sS~~~~~~~~~~~~Y~ 151 (263)
T PRK06181 81 ILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS---------RGQIVVVSSLAGLTGVPTRSGYA 151 (263)
T ss_pred EEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc---------CCEEEEEecccccCCCCCccHHH
Confidence 99999998776777777 889999999999999999999999999764 47899999999888888889999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 171 ~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
.+|++++.+++.++.++. +.+|+++++.||++.|++........... .........++.+|+|+++.+.+++..
T Consensus 152 ~sK~~~~~~~~~l~~~~~-~~~i~~~~i~pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~dva~~i~~~~~~ 225 (263)
T PRK06181 152 ASKHALHGFFDSLRIELA-DDGVAVTVVCPGFVATDIRKRALDGDGKP-LGKSPMQESKIMSAEECAEAILPAIAR 225 (263)
T ss_pred HHHHHHHHHHHHHHHHhh-hcCceEEEEecCccccCcchhhccccccc-cccccccccCCCCHHHHHHHHHHHhhC
Confidence 999999999999999997 77999999999999987644322111100 000001123678999999999999975
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-31 Score=225.07 Aligned_cols=226 Identities=32% Similarity=0.444 Sum_probs=192.5
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
+.+.+++++||||+|+||.+++++|+++|++|++++|+.+.+++..+++... .++.++.+|+++.++++.+++.+.+.+
T Consensus 2 ~~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (237)
T PRK07326 2 MSLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK-GNVLGLAADVRDEADVQRAVDAIVAAF 80 (237)
T ss_pred CCCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc-CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3467899999999999999999999999999999999988777777777654 568899999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
+++|++||++|....+++.+.+.+++++.+++|+.+++.+++++++.+.+. .++||++||..+..+.....
T Consensus 81 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---------~~~iv~~ss~~~~~~~~~~~ 151 (237)
T PRK07326 81 GGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRG---------GGYIINISSLAGTNFFAGGA 151 (237)
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHC---------CeEEEEECChhhccCCCCCc
Confidence 999999999998776777788999999999999999999999999999432 47899999998887877888
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~ 247 (298)
.|+.+|+++..+++.++.|+. ..|++++.|.||++.|+..... ..+. .....+++|+++.+.+++..+
T Consensus 152 ~y~~sk~a~~~~~~~~~~~~~-~~gi~v~~v~pg~~~t~~~~~~-~~~~----------~~~~~~~~d~a~~~~~~l~~~ 219 (237)
T PRK07326 152 AYNASKFGLVGFSEAAMLDLR-QYGIKVSTIMPGSVATHFNGHT-PSEK----------DAWKIQPEDIAQLVLDLLKMP 219 (237)
T ss_pred hHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEeeccccCcccccc-cchh----------hhccCCHHHHHHHHHHHHhCC
Confidence 999999999999999999997 7799999999999987643221 1111 011368999999999999877
Q ss_pred CCCccccE
Q 022386 248 GKYVNGNT 255 (298)
Q Consensus 248 ~~~~~G~~ 255 (298)
...+.++.
T Consensus 220 ~~~~~~~~ 227 (237)
T PRK07326 220 PRTLPSKI 227 (237)
T ss_pred ccccccce
Confidence 65554443
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-31 Score=221.77 Aligned_cols=198 Identities=19% Similarity=0.276 Sum_probs=170.4
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
++++||||++|||+++++.|+++ ++|++++|+.. .++||+++++++++++++ ++++|+
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------------~~~~D~~~~~~~~~~~~~----~~~id~ 58 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------------DVQVDITDPASIRALFEK----VGKVDA 58 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------------ceEecCCChHHHHHHHHh----cCCCCE
Confidence 37999999999999999999999 99999998742 368999999999998875 479999
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHHH
Q 022386 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 172 (298)
Q Consensus 93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~s 172 (298)
+|||||.....++.+.+.++|++.+++|+.+++++++.+.|+|.+ .++|+++||..+..+.+....|+++
T Consensus 59 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~----------~g~iv~iss~~~~~~~~~~~~Y~~s 128 (199)
T PRK07578 59 VVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND----------GGSFTLTSGILSDEPIPGGASAATV 128 (199)
T ss_pred EEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCeEEEEcccccCCCCCCchHHHHH
Confidence 999999876677778899999999999999999999999999974 4789999999998888899999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCCCCcc
Q 022386 173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVN 252 (298)
Q Consensus 173 K~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~ 252 (298)
|+++++++++++.|+ ++||+||.|+||+++|++... ....+.....+++|+|+.+.++++ ...+
T Consensus 129 K~a~~~~~~~la~e~--~~gi~v~~i~Pg~v~t~~~~~-----------~~~~~~~~~~~~~~~a~~~~~~~~---~~~~ 192 (199)
T PRK07578 129 NGALEGFVKAAALEL--PRGIRINVVSPTVLTESLEKY-----------GPFFPGFEPVPAARVALAYVRSVE---GAQT 192 (199)
T ss_pred HHHHHHHHHHHHHHc--cCCeEEEEEcCCcccCchhhh-----------hhcCCCCCCCCHHHHHHHHHHHhc---ccee
Confidence 999999999999998 459999999999998764210 111233457799999999999986 3588
Q ss_pred ccEEEe
Q 022386 253 GNTLIV 258 (298)
Q Consensus 253 G~~i~~ 258 (298)
|+.|.+
T Consensus 193 g~~~~~ 198 (199)
T PRK07578 193 GEVYKV 198 (199)
T ss_pred eEEecc
Confidence 988865
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-31 Score=229.18 Aligned_cols=218 Identities=20% Similarity=0.250 Sum_probs=180.2
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
|+++||||++|||+++++.|+++|++|++++|+.+..++.. +. .+.++.+|+++.++++++++.+.+.++++|+
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~----~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 75 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA----AA--GFTAVQLDVNDGAALARLAEELEAEHGGLDV 75 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HC--CCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 79999999999999999999999999999999876554432 22 3678899999999999999999999999999
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHHH
Q 022386 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 172 (298)
Q Consensus 93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~s 172 (298)
+|||||....+++.+.+.+++++.+++|+.+++.++++++|.|++. .|+||++||..+..+.+....|+++
T Consensus 76 vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~~Y~~s 146 (274)
T PRK05693 76 LINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS---------RGLVVNIGSVSGVLVTPFAGAYCAS 146 (274)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc---------CCEEEEECCccccCCCCCccHHHHH
Confidence 9999998777778888999999999999999999999999999764 4789999999998888888999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCCh---------HH--HHHHHhh--hccCCCCCCHHHHHHH
Q 022386 173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP---------EE--IRSKATD--YMAAYKFGEKWDIAMA 239 (298)
Q Consensus 173 K~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~---------~~--~~~~~~~--~~~~~~~~~~~dva~~ 239 (298)
|++++.++++++.|+. ++||+|+.|+||+++|++....... +. ..+.... ........+|+++++.
T Consensus 147 K~al~~~~~~l~~e~~-~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 225 (274)
T PRK05693 147 KAAVHALSDALRLELA-PFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFARQ 225 (274)
T ss_pred HHHHHHHHHHHHHHhh-hhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHH
Confidence 9999999999999997 7899999999999998764331100 00 0011111 1112335689999999
Q ss_pred HHHhcCC
Q 022386 240 ALYLASD 246 (298)
Q Consensus 240 ~~~L~s~ 246 (298)
+...+..
T Consensus 226 i~~~~~~ 232 (274)
T PRK05693 226 LLAAVQQ 232 (274)
T ss_pred HHHHHhC
Confidence 9887754
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-30 Score=227.15 Aligned_cols=237 Identities=23% Similarity=0.296 Sum_probs=192.5
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
.|++|||||++|||++++++|+++|++|+++.|+.+.++++.+.. +.++.++.+|++|.++++++++++.+.++++|
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 78 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY---GDRLWVLQLDVTDSAAVRAVVDRAFAALGRID 78 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 479999999999999999999999999999999976655544332 34688899999999999999999999999999
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHH
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~ 171 (298)
++|||||.....+..+.+.+++++.+++|+.++++++++++|+|++.+ .++||++||..+..+.+....|+.
T Consensus 79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~Y~~ 150 (276)
T PRK06482 79 VVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQG--------GGRIVQVSSEGGQIAYPGFSLYHA 150 (276)
T ss_pred EEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--------CCEEEEEcCcccccCCCCCchhHH
Confidence 999999987777777888999999999999999999999999998765 578999999988888888999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC-------hH----HHHHHHhhhccCCCCCCHHHHHHHH
Q 022386 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-------PE----EIRSKATDYMAAYKFGEKWDIAMAA 240 (298)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~-------~~----~~~~~~~~~~~~~~~~~~~dva~~~ 240 (298)
||++++.++++++.++. ++||+++.+.||.+.|+....... .. .+...... -+..-..+++|+++++
T Consensus 151 sK~a~~~~~~~l~~~~~-~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~a~ 228 (276)
T PRK06482 151 TKWGIEGFVEAVAQEVA-PFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALAD-GSFAIPGDPQKMVQAM 228 (276)
T ss_pred HHHHHHHHHHHHHHHhh-ccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhh-ccCCCCCCHHHHHHHH
Confidence 99999999999999997 789999999999998765432111 01 11111111 1222346899999999
Q ss_pred HHhcCCCCCCccccEEEeCCCCCC
Q 022386 241 LYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 241 ~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
...+.... .+..+++.+|...
T Consensus 229 ~~~~~~~~---~~~~~~~g~~~~~ 249 (276)
T PRK06482 229 IASADQTP---APRRLTLGSDAYA 249 (276)
T ss_pred HHHHcCCC---CCeEEecChHHHH
Confidence 98885432 2455777666544
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-31 Score=212.30 Aligned_cols=234 Identities=23% Similarity=0.204 Sum_probs=183.1
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHc-CCcEEEEcCC-hhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH-
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH- 86 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~-G~~Vv~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~- 86 (298)
|..|.++||||.+|||..++++|.+. |..+++..++ .+...+..+.......+++.+++|+++.++++.+++++.+-
T Consensus 1 Mspksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iV 80 (249)
T KOG1611|consen 1 MSPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIV 80 (249)
T ss_pred CCCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhc
Confidence 34567999999999999999999964 7777766555 54432222333234678999999999999999999999887
Q ss_pred -hCCccEEEECCCCC-CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCC---CCCCCCCCcEEEEeccccccc
Q 022386 87 -FGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR---GQASSSSGGIIINISATLHYT 161 (298)
Q Consensus 87 -~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~---~~~~~~~~g~iv~vss~~~~~ 161 (298)
...+|++|||||+. ......+.+.+.|.+.+++|..++.+++|+|+|++++... ++..+..++.|||+||..+..
T Consensus 81 g~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~ 160 (249)
T KOG1611|consen 81 GSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSI 160 (249)
T ss_pred ccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeecccccc
Confidence 56899999999976 3455666778999999999999999999999999998753 344455578899998877654
Q ss_pred CC---CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHH
Q 022386 162 AT---WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 238 (298)
Q Consensus 162 ~~---~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 238 (298)
+. ..+.+|..||+|++.++|+++.|++ +.+|-|..++||||.|+|....- ..++|+-+.
T Consensus 161 ~~~~~~~~~AYrmSKaAlN~f~ksls~dL~-~~~ilv~sihPGwV~TDMgg~~a-----------------~ltveeSts 222 (249)
T KOG1611|consen 161 GGFRPGGLSAYRMSKAALNMFAKSLSVDLK-DDHILVVSIHPGWVQTDMGGKKA-----------------ALTVEESTS 222 (249)
T ss_pred CCCCCcchhhhHhhHHHHHHHHHHhhhhhc-CCcEEEEEecCCeEEcCCCCCCc-----------------ccchhhhHH
Confidence 43 3468999999999999999999998 88999999999999999876432 335555555
Q ss_pred HHHHhcCCCCCCccccEEEeCCC
Q 022386 239 AALYLASDAGKYVNGNTLIVDGG 261 (298)
Q Consensus 239 ~~~~L~s~~~~~~~G~~i~~dgG 261 (298)
.++.-...-...-+|..++-|+-
T Consensus 223 ~l~~~i~kL~~~hnG~ffn~dlt 245 (249)
T KOG1611|consen 223 KLLASINKLKNEHNGGFFNRDGT 245 (249)
T ss_pred HHHHHHHhcCcccCcceEccCCC
Confidence 55554444345567878877764
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-31 Score=225.18 Aligned_cols=211 Identities=16% Similarity=0.113 Sum_probs=183.5
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC-CCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
|+++||||++|||++++++|+++|++|++++|+.+..++..+.+... +.++.+++||++++++++++++++.+ .+|
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~d 78 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA---LPD 78 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh---cCC
Confidence 68999999999999999999999999999999988777777776554 45789999999999999999998764 579
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHH
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~ 171 (298)
++|||+|.....+..+.+.+++.+.+++|+.+++++++++.|+|.+++ .+++|++||..+..+.+....|++
T Consensus 79 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~Y~~ 150 (243)
T PRK07102 79 IVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARG--------SGTIVGISSVAGDRGRASNYVYGS 150 (243)
T ss_pred EEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC--------CCEEEEEecccccCCCCCCcccHH
Confidence 999999987666777788999999999999999999999999998765 688999999988888888889999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCC
Q 022386 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~ 247 (298)
+|+++++++++++.|+. +.||++++|+||+++|++..... .+...+.+++++++.+..+++..
T Consensus 151 sK~a~~~~~~~l~~el~-~~gi~v~~v~pg~v~t~~~~~~~------------~~~~~~~~~~~~a~~i~~~~~~~ 213 (243)
T PRK07102 151 AKAALTAFLSGLRNRLF-KSGVHVLTVKPGFVRTPMTAGLK------------LPGPLTAQPEEVAKDIFRAIEKG 213 (243)
T ss_pred HHHHHHHHHHHHHHHhh-ccCcEEEEEecCcccChhhhccC------------CCccccCCHHHHHHHHHHHHhCC
Confidence 99999999999999997 78999999999999987432211 12334679999999999988753
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-31 Score=256.82 Aligned_cols=221 Identities=20% Similarity=0.202 Sum_probs=192.0
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
....|++|+++||||++|||+++++.|+++|++|++++|+.+.+++..+++...+.++.++.||++|.++++++++++.+
T Consensus 365 ~~~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 444 (657)
T PRK07201 365 LRGPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILA 444 (657)
T ss_pred cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 45578899999999999999999999999999999999999888888888877777899999999999999999999999
Q ss_pred HhCCccEEEECCCCCCCCCCCCC--CHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 86 HFGKLDILVNAAAGNFLVPAEDL--SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
.++++|++|||||......+.+. ..+++++++++|+.+++.+++.++|.|++++ .|+||++||..+..+.
T Consensus 445 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~ 516 (657)
T PRK07201 445 EHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERR--------FGHVVNVSSIGVQTNA 516 (657)
T ss_pred hcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC--------CCEEEEECChhhcCCC
Confidence 99999999999997544443322 3588999999999999999999999998765 6899999999998888
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHh
Q 022386 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (298)
Q Consensus 164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L 243 (298)
+....|++||++++.++++++.|+. ++||+|+.|+||+++|++..... . .......+|+++|+.++..
T Consensus 517 ~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~v~pg~v~T~~~~~~~---~--------~~~~~~~~~~~~a~~i~~~ 584 (657)
T PRK07201 517 PRFSAYVASKAALDAFSDVAASETL-SDGITFTTIHMPLVRTPMIAPTK---R--------YNNVPTISPEEAADMVVRA 584 (657)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHH-hhCCcEEEEECCcCcccccCccc---c--------ccCCCCCCHHHHHHHHHHH
Confidence 8889999999999999999999997 78999999999999998643211 0 0122357999999999987
Q ss_pred cCC
Q 022386 244 ASD 246 (298)
Q Consensus 244 ~s~ 246 (298)
+..
T Consensus 585 ~~~ 587 (657)
T PRK07201 585 IVE 587 (657)
T ss_pred HHh
Confidence 754
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-31 Score=224.93 Aligned_cols=220 Identities=21% Similarity=0.227 Sum_probs=179.0
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHH-HHHHh---C
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES-TINHF---G 88 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~-~~~~~---~ 88 (298)
++++||||++|||++++++|+++|++|++++|+.+. +. ....+.++.++++|+++++++++++++ +.+.+ +
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~--~~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 76 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHP--SL---AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA 76 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcch--hh---hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence 379999999999999999999999999999998643 11 223355788899999999999998877 55555 4
Q ss_pred CccEEEECCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 89 KLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 89 ~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
++|++|||+|.... .++.+.+.+++++.+++|+.+++.+++.+.+.|.++. .++||++||..+..+.+++.
T Consensus 77 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~ 148 (243)
T PRK07023 77 SRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAA--------ERRILHISSGAARNAYAGWS 148 (243)
T ss_pred CceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccC--------CCEEEEEeChhhcCCCCCch
Confidence 79999999997543 5677788999999999999999999999999998754 58899999999998888999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC--Ch--HHHHHHHhhhccCCCCCCHHHHHH-HHHH
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL--AP--EEIRSKATDYMAAYKFGEKWDIAM-AALY 242 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~dva~-~~~~ 242 (298)
.|+++|++++.+++.++.+ . +.||+++.|+||+++|++..... .. ......+....+.++..+|+|+|+ .+.+
T Consensus 149 ~Y~~sK~a~~~~~~~~~~~-~-~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~ 226 (243)
T PRK07023 149 VYCATKAALDHHARAVALD-A-NRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKASGALSTPEDAARRLIAY 226 (243)
T ss_pred HHHHHHHHHHHHHHHHHhc-C-CCCcEEEEecCCccccHHHHHHHhcccccchHHHHHHHhhhcCCCCCHHHHHHHHHHH
Confidence 9999999999999999999 5 67999999999999987532110 00 011223344456678899999999 5677
Q ss_pred hcCCC
Q 022386 243 LASDA 247 (298)
Q Consensus 243 L~s~~ 247 (298)
|+++.
T Consensus 227 l~~~~ 231 (243)
T PRK07023 227 LLSDD 231 (243)
T ss_pred Hhccc
Confidence 77764
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.2e-31 Score=221.49 Aligned_cols=192 Identities=27% Similarity=0.290 Sum_probs=173.4
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
...++.+|.|+|||+.+|+|+.+|++|.++|++|.+.-.+++..+.+..+.. .++...++.|++++++++++.+.+.+
T Consensus 23 ~~~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~--s~rl~t~~LDVT~~esi~~a~~~V~~ 100 (322)
T KOG1610|consen 23 VLDSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK--SPRLRTLQLDVTKPESVKEAAQWVKK 100 (322)
T ss_pred cccccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc--CCcceeEeeccCCHHHHHHHHHHHHH
Confidence 3457889999999999999999999999999999987777776666666654 56778889999999999999999988
Q ss_pred HhC--CccEEEECCCCC-CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC
Q 022386 86 HFG--KLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (298)
Q Consensus 86 ~~~--~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~ 162 (298)
..+ .+..+|||||+. ..++.+..+.+++++.+++|+.|++.++++|+|++++. +|+||+++|+.+..+
T Consensus 101 ~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~a---------rGRvVnvsS~~GR~~ 171 (322)
T KOG1610|consen 101 HLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRA---------RGRVVNVSSVLGRVA 171 (322)
T ss_pred hcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhc---------cCeEEEecccccCcc
Confidence 653 699999999965 56888889999999999999999999999999999987 599999999999999
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCccc
Q 022386 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV 209 (298)
Q Consensus 163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~ 209 (298)
.|..++|++||+|++.++.++++|+. ++||.|..|.||+++|+...
T Consensus 172 ~p~~g~Y~~SK~aVeaf~D~lR~EL~-~fGV~VsiiePG~f~T~l~~ 217 (322)
T KOG1610|consen 172 LPALGPYCVSKFAVEAFSDSLRRELR-PFGVKVSIIEPGFFKTNLAN 217 (322)
T ss_pred CcccccchhhHHHHHHHHHHHHHHHH-hcCcEEEEeccCccccccCC
Confidence 99999999999999999999999998 99999999999999887653
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-30 Score=210.25 Aligned_cols=163 Identities=31% Similarity=0.432 Sum_probs=153.1
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCC--hhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR--KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~--~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
|+++||||++|||++++++|+++|. .|++++|+ .+..+++...+...+.++.+++||++++++++++++++.+.+++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 7999999999999999999999976 67888998 77788888888888888999999999999999999999999999
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhh
Q 022386 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 169 (298)
Q Consensus 90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y 169 (298)
+|++|||+|....+++.+.+.++|++.|++|+.+++++.++++| + + .|+||++||..+..+.+.+..|
T Consensus 81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~--~--------~g~iv~~sS~~~~~~~~~~~~Y 148 (167)
T PF00106_consen 81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP--Q--G--------GGKIVNISSIAGVRGSPGMSAY 148 (167)
T ss_dssp ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH--H--T--------TEEEEEEEEGGGTSSSTTBHHH
T ss_pred ccccccccccccccccccccchhhhhccccccceeeeeeehhee--c--c--------ccceEEecchhhccCCCCChhH
Confidence 99999999998888888899999999999999999999999999 2 2 5999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 022386 170 SAAKAAVDSITRSLALEW 187 (298)
Q Consensus 170 ~~sK~a~~~l~~~la~e~ 187 (298)
++||+|+++|+++++.|+
T Consensus 149 ~askaal~~~~~~la~e~ 166 (167)
T PF00106_consen 149 SASKAALRGLTQSLAAEL 166 (167)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 999999999999999986
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.9e-30 Score=218.06 Aligned_cols=204 Identities=18% Similarity=0.145 Sum_probs=171.1
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
++++||||++|||+++++.|+++|++|++++|+.+.++++.+ ...++.+++||+++.++++++++++.. .+|.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~---~~d~ 74 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHT----QSANIFTLAFDVTDHPGTKAALSQLPF---IPEL 74 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----hcCCCeEEEeeCCCHHHHHHHHHhccc---CCCE
Confidence 789999999999999999999999999999999766554433 334688899999999999999987642 5799
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHHH
Q 022386 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 172 (298)
Q Consensus 93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~s 172 (298)
+|||||.....+..+.+.++|++++++|+.+++++++++.|+|.+ +++||++||..+..+.+....|+++
T Consensus 75 ~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~----------~~~iv~isS~~~~~~~~~~~~Y~as 144 (240)
T PRK06101 75 WIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC----------GHRVVIVGSIASELALPRAEAYGAS 144 (240)
T ss_pred EEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc----------CCeEEEEechhhccCCCCCchhhHH
Confidence 999998654444445788999999999999999999999999964 4679999999998888889999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 173 K~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
|++++.+++.++.|+. ++||+++.+.||+++|++..... .......+++++++.++..+..
T Consensus 145 K~a~~~~~~~l~~e~~-~~gi~v~~v~pg~i~t~~~~~~~------------~~~~~~~~~~~~a~~i~~~i~~ 205 (240)
T PRK06101 145 KAAVAYFARTLQLDLR-PKGIEVVTVFPGFVATPLTDKNT------------FAMPMIITVEQASQEIRAQLAR 205 (240)
T ss_pred HHHHHHHHHHHHHHHH-hcCceEEEEeCCcCCCCCcCCCC------------CCCCcccCHHHHHHHHHHHHhc
Confidence 9999999999999997 78999999999999987543211 0112246899999999887755
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=220.91 Aligned_cols=202 Identities=23% Similarity=0.219 Sum_probs=165.5
Q ss_pred HHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCC
Q 022386 28 ISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAED 107 (298)
Q Consensus 28 ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~ 107 (298)
+|++|+++|++|++++|+.++.+ . ..+++||++|.++++++++++. +++|++|||||....
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~------~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~~----- 61 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMT-----L------DGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPGT----- 61 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhh-----h------hHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCCC-----
Confidence 47899999999999999876432 1 2357899999999999998774 689999999996421
Q ss_pred CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc--------------------------
Q 022386 108 LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-------------------------- 161 (298)
Q Consensus 108 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~-------------------------- 161 (298)
++++..+++|+.+++++++.++|+|.+ .|+||++||..++.
T Consensus 62 ---~~~~~~~~vN~~~~~~l~~~~~~~~~~----------~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (241)
T PRK12428 62 ---APVELVARVNFLGLRHLTEALLPRMAP----------GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAA 128 (241)
T ss_pred ---CCHHHhhhhchHHHHHHHHHHHHhccC----------CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhc
Confidence 347899999999999999999999963 47899999988762
Q ss_pred -CCCCchhhHHHHHHHHHHHHHHH-HHhcCCCCeEEEEEeCCcccCCcccCcCCh--HHHHHHHhhhccCCCCCCHHHHH
Q 022386 162 -ATWYQIHVSAAKAAVDSITRSLA-LEWGTDYAIRVNGIAPGPIKDTAGVSKLAP--EEIRSKATDYMAAYKFGEKWDIA 237 (298)
Q Consensus 162 -~~~~~~~Y~~sK~a~~~l~~~la-~e~~~~~girv~~i~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva 237 (298)
+.+....|++||+++..+++.++ .|++ ++|||||+|+||+++|++....... ++... ....+.+++.+|+|+|
T Consensus 129 ~~~~~~~~Y~~sK~a~~~~~~~la~~e~~-~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~--~~~~~~~~~~~pe~va 205 (241)
T PRK12428 129 HPVALATGYQLSKEALILWTMRQAQPWFG-ARGIRVNCVAPGPVFTPILGDFRSMLGQERVD--SDAKRMGRPATADEQA 205 (241)
T ss_pred cCCCcccHHHHHHHHHHHHHHHHHHHhhh-ccCeEEEEeecCCccCcccccchhhhhhHhhh--hcccccCCCCCHHHHH
Confidence 45567899999999999999999 9997 7899999999999999875432111 11111 1234677889999999
Q ss_pred HHHHHhcCCCCCCccccEEEeCCCCCC
Q 022386 238 MAALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 238 ~~~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
+.+.||+++.+.+++|+.+.+|||...
T Consensus 206 ~~~~~l~s~~~~~~~G~~i~vdgg~~~ 232 (241)
T PRK12428 206 AVLVFLCSDAARWINGVNLPVDGGLAA 232 (241)
T ss_pred HHHHHHcChhhcCccCcEEEecCchHH
Confidence 999999998889999999999999654
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=206.72 Aligned_cols=187 Identities=25% Similarity=0.365 Sum_probs=167.6
Q ss_pred CCCcEEEEecCC-chhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH-Hh
Q 022386 10 LKGKVALLTGGG-SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN-HF 87 (298)
Q Consensus 10 l~gk~~lVtG~t-~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~-~~ 87 (298)
=+.|.++|||++ ||||.++++.|++.|+.|++++|+.+....+... .+ +....+|+++++++.....++++ .+
T Consensus 5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~---~g--l~~~kLDV~~~~~V~~v~~evr~~~~ 79 (289)
T KOG1209|consen 5 SQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQ---FG--LKPYKLDVSKPEEVVTVSGEVRANPD 79 (289)
T ss_pred cCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHh---hC--CeeEEeccCChHHHHHHHHHHhhCCC
Confidence 356899999887 8999999999999999999999997655544332 23 77889999999999999999998 68
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
|++|+|+||||..-..|..+.+.+..++.|++|+.|++..++++...+.+. .|.|||+.|..+..+.|..+
T Consensus 80 Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lika---------KGtIVnvgSl~~~vpfpf~~ 150 (289)
T KOG1209|consen 80 GKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKA---------KGTIVNVGSLAGVVPFPFGS 150 (289)
T ss_pred CceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHc---------cceEEEecceeEEeccchhh
Confidence 999999999998877888899999999999999999999999999777665 49999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK 211 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~ 211 (298)
.|++||+|+..+++.|..|++ ++||+|..+.||-|.|......
T Consensus 151 iYsAsKAAihay~~tLrlEl~-PFgv~Vin~itGGv~T~Ia~k~ 193 (289)
T KOG1209|consen 151 IYSASKAAIHAYARTLRLELK-PFGVRVINAITGGVATDIADKR 193 (289)
T ss_pred hhhHHHHHHHHhhhhcEEeee-ccccEEEEecccceecccccCC
Confidence 999999999999999999998 9999999999999998766553
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.7e-29 Score=213.44 Aligned_cols=219 Identities=18% Similarity=0.226 Sum_probs=178.5
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
+|+++||||++|||++++++|+++|++|++++|+.+..+++.+.....+.++.++.+|++++++++++++ +++|
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~id 75 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE------WDVD 75 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc------CCCC
Confidence 6799999999999999999999999999999999877777766666666778899999999998887654 4899
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHH
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~ 171 (298)
++|||||....++..+.+.+.++..+++|+.+++.+++.+++.+.+.+ .++||++||..+..+.+....|++
T Consensus 76 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--------~~~iv~~SS~~~~~~~~~~~~Y~~ 147 (257)
T PRK09291 76 VLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARG--------KGKVVFTSSMAGLITGPFTGAYCA 147 (257)
T ss_pred EEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--------CceEEEEcChhhccCCCCcchhHH
Confidence 999999988777888889999999999999999999999999998765 578999999988888788889999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC-------hH-HHHHHHhhhccCCCCCCHHHHHHHHHHh
Q 022386 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-------PE-EIRSKATDYMAAYKFGEKWDIAMAALYL 243 (298)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~-------~~-~~~~~~~~~~~~~~~~~~~dva~~~~~L 243 (298)
||++++.+++.++.++. +.||+++.|+||++.|+....... +. ..........+. ...++++++..+..+
T Consensus 148 sK~a~~~~~~~l~~~~~-~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 225 (257)
T PRK09291 148 SKHALEAIAEAMHAELK-PFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPL-EQFDPQEMIDAMVEV 225 (257)
T ss_pred HHHHHHHHHHHHHHHHH-hcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhccc-cCCCHHHHHHHHHHH
Confidence 99999999999999987 779999999999998764321110 00 001100111122 235888988888777
Q ss_pred cCC
Q 022386 244 ASD 246 (298)
Q Consensus 244 ~s~ 246 (298)
+..
T Consensus 226 l~~ 228 (257)
T PRK09291 226 IPA 228 (257)
T ss_pred hcC
Confidence 643
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-28 Score=209.31 Aligned_cols=204 Identities=27% Similarity=0.293 Sum_probs=175.6
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
+.+.+++++||||+++||++++++|+++|+ +|++++|+.+..++ .+.++.++.+|+++.++++++++.
T Consensus 2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~---- 70 (238)
T PRK08264 2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-------LGPRVVPLQLDVTDPASVAAAAEA---- 70 (238)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-------cCCceEEEEecCCCHHHHHHHHHh----
Confidence 557899999999999999999999999999 99999998765433 345788999999999999887764
Q ss_pred hCCccEEEECCCC-CCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC
Q 022386 87 FGKLDILVNAAAG-NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (298)
Q Consensus 87 ~~~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~ 165 (298)
++++|++||++|. ....++.+.+.+++.+.+++|+.+++.+.+++.+.+++.+ .+++|++||..+..+.+.
T Consensus 71 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~~~v~~sS~~~~~~~~~ 142 (238)
T PRK08264 71 ASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANG--------GGAIVNVLSVLSWVNFPN 142 (238)
T ss_pred cCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--------CCEEEEEcChhhccCCCC
Confidence 4689999999998 5556777888999999999999999999999999998765 588999999998888888
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcC
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s 245 (298)
...|+.+|++++.+++.++.++. ++||+++.+.||.++|++..... ....+++++++.++..+.
T Consensus 143 ~~~y~~sK~a~~~~~~~l~~~~~-~~~i~~~~v~pg~v~t~~~~~~~---------------~~~~~~~~~a~~~~~~~~ 206 (238)
T PRK08264 143 LGTYSASKAAAWSLTQALRAELA-PQGTRVLGVHPGPIDTDMAAGLD---------------APKASPADVARQILDALE 206 (238)
T ss_pred chHhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeCCcccccccccCC---------------cCCCCHHHHHHHHHHHHh
Confidence 89999999999999999999997 77999999999999887532210 115688999999988775
Q ss_pred C
Q 022386 246 D 246 (298)
Q Consensus 246 ~ 246 (298)
.
T Consensus 207 ~ 207 (238)
T PRK08264 207 A 207 (238)
T ss_pred C
Confidence 4
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-30 Score=216.84 Aligned_cols=187 Identities=21% Similarity=0.268 Sum_probs=166.9
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC-CCCeEEEEccCCCHHH-HHHHHHHHHHHhC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKRED-AVRVVESTINHFG 88 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dls~~~~-~~~~~~~~~~~~~ 88 (298)
.|+.++|||||.|||++.|+.|+++|.+|++++|+.++++.+.+++.+. ..++.++.+|+++.++ .+++.+.+.+ .
T Consensus 48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~--~ 125 (312)
T KOG1014|consen 48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAG--L 125 (312)
T ss_pred cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcC--C
Confidence 3689999999999999999999999999999999999999999999875 4678899999998876 3333333322 4
Q ss_pred CccEEEECCCCCC--CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 89 KLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 89 ~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
.+.+||||+|... +..+.+.+...+++++.+|..+...+++.++|.|.+++ +|.||+++|.++..+.|.+
T Consensus 126 ~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~--------~G~IvnigS~ag~~p~p~~ 197 (312)
T KOG1014|consen 126 DVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERK--------KGIIVNIGSFAGLIPTPLL 197 (312)
T ss_pred ceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCC--------CceEEEeccccccccChhH
Confidence 7888999999876 56677777779999999999999999999999999977 7999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcc
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG 208 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~ 208 (298)
..|+++|+.+..|+++|..|+. .+||.|-++.|..|.|.+.
T Consensus 198 s~ysasK~~v~~~S~~L~~Ey~-~~gI~Vq~v~p~~VaTkm~ 238 (312)
T KOG1014|consen 198 SVYSASKAFVDFFSRCLQKEYE-SKGIFVQSVIPYLVATKMA 238 (312)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-hcCeEEEEeehhheecccc
Confidence 9999999999999999999997 8899999999999988754
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-28 Score=212.16 Aligned_cols=222 Identities=22% Similarity=0.201 Sum_probs=179.8
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh-CCcc
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLD 91 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-~~id 91 (298)
|+++||||+|+||+++++.|+++|++|++++|+.++++.. .+. .+..+.||+++.++++.+++.+.+.. +.+|
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~----~~~--~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~ 76 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARM----NSL--GFTGILLDLDDPESVERAADEVIALTDNRLY 76 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHH----HhC--CCeEEEeecCCHHHHHHHHHHHHHhcCCCCe
Confidence 7899999999999999999999999999999987665443 222 36778999999999999999887754 6899
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHH
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~ 171 (298)
++|||+|.....+..+.+.+++++.+++|+.+++++++.+++.|.+.+ .++||++||..+..+.+....|++
T Consensus 77 ~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~--------~~~iv~~ss~~~~~~~~~~~~Y~~ 148 (256)
T PRK08017 77 GLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG--------EGRIVMTSSVMGLISTPGRGAYAA 148 (256)
T ss_pred EEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC--------CCEEEEEcCcccccCCCCccHHHH
Confidence 999999977667777889999999999999999999999999998765 578999999988888888999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCCC
Q 022386 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK 249 (298)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~ 249 (298)
+|++++.++++++.++. .++++++.+.||+++|+.....................+.+.+++|+++.+..++.....
T Consensus 149 sK~~~~~~~~~l~~~~~-~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~ 225 (256)
T PRK08017 149 SKYALEAWSDALRMELR-HSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHALESPKP 225 (256)
T ss_pred HHHHHHHHHHHHHHHHh-hcCCEEEEEeCCCcccchhhcccchhhccchhhhHHHhhcCCCHHHHHHHHHHHHhCCCC
Confidence 99999999999999987 779999999999998764332111110000000011112357999999999999976543
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-28 Score=208.14 Aligned_cols=179 Identities=20% Similarity=0.237 Sum_probs=152.4
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
|+++||||++|||+++++.|+++|++|++++|+.+..++..+ . .++.++.||++|+++++++++.+.+ +++|+
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~----~-~~~~~~~~D~~d~~~~~~~~~~~~~--~~id~ 74 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA----L-PGVHIEKLDMNDPASLDQLLQRLQG--QRFDL 74 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh----c-cccceEEcCCCCHHHHHHHHHHhhc--CCCCE
Confidence 789999999999999999999999999999999765543321 1 3467788999999999999998854 58999
Q ss_pred EEECCCCCCC--CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC---CCch
Q 022386 93 LVNAAAGNFL--VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT---WYQI 167 (298)
Q Consensus 93 li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~---~~~~ 167 (298)
+|||||.... .++.+.+.++++..+++|+.+++.+.+.+++.++.. .+.+++++|..+..+. ....
T Consensus 75 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---------~~~iv~~ss~~g~~~~~~~~~~~ 145 (225)
T PRK08177 75 LFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG---------QGVLAFMSSQLGSVELPDGGEMP 145 (225)
T ss_pred EEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc---------CCEEEEEccCccccccCCCCCcc
Confidence 9999997532 456677889999999999999999999999999753 3789999987665432 3567
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcc
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG 208 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~ 208 (298)
.|+++|++++.+++.++.|++ ++||+||+|+||+++|++.
T Consensus 146 ~Y~~sK~a~~~~~~~l~~e~~-~~~i~v~~i~PG~i~t~~~ 185 (225)
T PRK08177 146 LYKASKAALNSMTRSFVAELG-EPTLTVLSMHPGWVKTDMG 185 (225)
T ss_pred chHHHHHHHHHHHHHHHHHhh-cCCeEEEEEcCCceecCCC
Confidence 899999999999999999997 7899999999999998864
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-28 Score=208.33 Aligned_cols=206 Identities=13% Similarity=0.095 Sum_probs=156.0
Q ss_pred CCCCCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHH
Q 022386 2 ESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVE 81 (298)
Q Consensus 2 ~~~~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~ 81 (298)
.+||+...|+||+++||||++|||++++++|+++|++|++++|+.....+ ... ... ..++.+|+++.+++++
T Consensus 4 ~~~~~~~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~---~~~-~~~-~~~~~~D~~~~~~~~~--- 75 (245)
T PRK12367 4 ADPMAQSTWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE---SND-ESP-NEWIKWECGKEESLDK--- 75 (245)
T ss_pred cchhhHHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh---hhc-cCC-CeEEEeeCCCHHHHHH---
Confidence 46899999999999999999999999999999999999999998622111 111 112 3567899999988764
Q ss_pred HHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc
Q 022386 82 STINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 161 (298)
Q Consensus 82 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~ 161 (298)
.++++|++|||||.... .+.+.++|++.+++|+.++++++++++|.|.++... .++.+++.+|..+..
T Consensus 76 ----~~~~iDilVnnAG~~~~---~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~-----~g~~iiv~ss~a~~~ 143 (245)
T PRK12367 76 ----QLASLDVLILNHGINPG---GRQDPENINKALEINALSSWRLLELFEDIALNNNSQ-----IPKEIWVNTSEAEIQ 143 (245)
T ss_pred ----hcCCCCEEEECCccCCc---CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccC-----CCeEEEEEecccccC
Confidence 35789999999997432 346789999999999999999999999999763210 023344445555554
Q ss_pred CCCCchhhHHHHHHHHHHH---HHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHH
Q 022386 162 ATWYQIHVSAAKAAVDSIT---RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 238 (298)
Q Consensus 162 ~~~~~~~Y~~sK~a~~~l~---~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 238 (298)
+ +....|++||+|+..+. +.++.|+. ..||+|+.+.||+++|++.. ....+|+++|+
T Consensus 144 ~-~~~~~Y~aSKaal~~~~~l~~~l~~e~~-~~~i~v~~~~pg~~~t~~~~------------------~~~~~~~~vA~ 203 (245)
T PRK12367 144 P-ALSPSYEISKRLIGQLVSLKKNLLDKNE-RKKLIIRKLILGPFRSELNP------------------IGIMSADFVAK 203 (245)
T ss_pred C-CCCchhHHHHHHHHHHHHHHHHHHHhhc-ccccEEEEecCCCcccccCc------------------cCCCCHHHHHH
Confidence 4 35678999999986544 44444555 67999999999999876410 12568999999
Q ss_pred HHHHhcCCC
Q 022386 239 AALYLASDA 247 (298)
Q Consensus 239 ~~~~L~s~~ 247 (298)
.+++.+...
T Consensus 204 ~i~~~~~~~ 212 (245)
T PRK12367 204 QILDQANLG 212 (245)
T ss_pred HHHHHHhcC
Confidence 999998653
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-28 Score=205.88 Aligned_cols=222 Identities=23% Similarity=0.232 Sum_probs=192.9
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCC--CCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
+.++||||++|||+++|+.+..+|++|.++.|+..++.++++++.-.. .++.+..+|++|-+++...++++++.++.+
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~ 113 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI 113 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence 689999999999999999999999999999999999999999886542 337788999999999999999999999999
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhH
Q 022386 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS 170 (298)
Q Consensus 91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~ 170 (298)
|.+|+|||....+-+.+.+++.++..+++|++++++.+++.++.|++..+ .|+|+.+||..+..+..+.++|+
T Consensus 114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~-------~g~I~~vsS~~a~~~i~GysaYs 186 (331)
T KOG1210|consen 114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREH-------LGRIILVSSQLAMLGIYGYSAYS 186 (331)
T ss_pred ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhcccc-------CcEEEEehhhhhhcCcccccccc
Confidence 99999999999999999999999999999999999999999999998753 46999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhc
Q 022386 171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (298)
Q Consensus 171 ~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~ 244 (298)
.+|+|+.+|+..+++|+. ++||+|....|+.+.||.+............... ......++|++|.+++.-+
T Consensus 187 ~sK~alrgLa~~l~qE~i-~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii~--g~ss~~~~e~~a~~~~~~~ 257 (331)
T KOG1210|consen 187 PSKFALRGLAEALRQELI-KYGVHVTLYYPPDTLTPGFERENKTKPEETKIIE--GGSSVIKCEEMAKAIVKGM 257 (331)
T ss_pred cHHHHHHHHHHHHHHHHh-hcceEEEEEcCCCCCCCccccccccCchheeeec--CCCCCcCHHHHHHHHHhHH
Confidence 999999999999999997 8899999999999999865443322211112211 2234578899998887544
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.1e-28 Score=202.47 Aligned_cols=212 Identities=20% Similarity=0.203 Sum_probs=171.9
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
|+++||||+++||++++++|+++|++|++++|+.+..+++ ... .+.++.+|+++.++++++++++.. +++|+
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~----~~~--~~~~~~~D~~~~~~v~~~~~~~~~--~~~d~ 73 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAAL----QAL--GAEALALDVADPASVAGLAWKLDG--EALDA 73 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHH----Hhc--cceEEEecCCCHHHHHHHHHHhcC--CCCCE
Confidence 6899999999999999999999999999999987655433 222 255789999999999998877642 47999
Q ss_pred EEECCCCCC--CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc---h
Q 022386 93 LVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ---I 167 (298)
Q Consensus 93 li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~---~ 167 (298)
+|||+|... ..+..+.+.++|++.+++|+.+++.++++++|+|.+. .|++++++|..+..+.... .
T Consensus 74 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~~~~ 144 (222)
T PRK06953 74 AVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA---------GGVLAVLSSRMGSIGDATGTTGW 144 (222)
T ss_pred EEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc---------CCeEEEEcCcccccccccCCCcc
Confidence 999999752 3455567899999999999999999999999998653 4789999998776553322 3
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~ 247 (298)
.|+++|++++.+++.++.++. ++++|.|+||+++|++... .....+++.+..+..++...
T Consensus 145 ~Y~~sK~a~~~~~~~~~~~~~---~i~v~~v~Pg~i~t~~~~~-----------------~~~~~~~~~~~~~~~~~~~~ 204 (222)
T PRK06953 145 LYRASKAALNDALRAASLQAR---HATCIALHPGWVRTDMGGA-----------------QAALDPAQSVAGMRRVIAQA 204 (222)
T ss_pred ccHHhHHHHHHHHHHHhhhcc---CcEEEEECCCeeecCCCCC-----------------CCCCCHHHHHHHHHHHHHhc
Confidence 599999999999999999864 7999999999999886432 11246788888888877665
Q ss_pred CCCccccEEEeCCC
Q 022386 248 GKYVNGNTLIVDGG 261 (298)
Q Consensus 248 ~~~~~G~~i~~dgG 261 (298)
....+|..+..|++
T Consensus 205 ~~~~~~~~~~~~~~ 218 (222)
T PRK06953 205 TRRDNGRFFQYDGV 218 (222)
T ss_pred CcccCceEEeeCCc
Confidence 56788888888866
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-26 Score=194.62 Aligned_cols=219 Identities=22% Similarity=0.243 Sum_probs=176.7
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
.|+++||||+++||+++++.|+++ ++|++++|+.+..++..+.. ..+.++.+|++|+++++++++.+ +++|
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~----~~id 73 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL----PGATPFPVDLTDPEAIAAAVEQL----GRLD 73 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh----ccceEEecCCCCHHHHHHHHHhc----CCCC
Confidence 579999999999999999999999 99999999876555443322 24788999999999998887643 5899
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHH
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~ 171 (298)
++||++|.....+..+.+.++|.+.+++|+.+++.+++.+++.++++ .+++|++||..+..+.++...|+.
T Consensus 74 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---------~~~~v~~ss~~~~~~~~~~~~y~~ 144 (227)
T PRK08219 74 VLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA---------HGHVVFINSGAGLRANPGWGSYAA 144 (227)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC---------CCeEEEEcchHhcCcCCCCchHHH
Confidence 99999998766667778899999999999999999999999999875 378999999988888888899999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCCCCc
Q 022386 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYV 251 (298)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~ 251 (298)
+|.+++.+++.++.++. .. |+++.|.||++.++....... ......+..++.+++|+++.++++++...
T Consensus 145 ~K~a~~~~~~~~~~~~~-~~-i~~~~i~pg~~~~~~~~~~~~------~~~~~~~~~~~~~~~dva~~~~~~l~~~~--- 213 (227)
T PRK08219 145 SKFALRALADALREEEP-GN-VRVTSVHPGRTDTDMQRGLVA------QEGGEYDPERYLRPETVAKAVRFAVDAPP--- 213 (227)
T ss_pred HHHHHHHHHHHHHHHhc-CC-ceEEEEecCCccchHhhhhhh------hhccccCCCCCCCHHHHHHHHHHHHcCCC---
Confidence 99999999999999876 44 999999999998764322110 00111234567899999999999997543
Q ss_pred cccEEEeC
Q 022386 252 NGNTLIVD 259 (298)
Q Consensus 252 ~G~~i~~d 259 (298)
.|..++++
T Consensus 214 ~~~~~~~~ 221 (227)
T PRK08219 214 DAHITEVV 221 (227)
T ss_pred CCccceEE
Confidence 34454443
|
|
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.6e-28 Score=194.80 Aligned_cols=239 Identities=18% Similarity=0.135 Sum_probs=189.8
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
-..++++|+||+|+|||..++..+.+.+-.....++.....+ ......+.+........|++...-+.++++..++.++
T Consensus 3 ~~~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~-~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~g 81 (253)
T KOG1204|consen 3 LNMRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE-LEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGG 81 (253)
T ss_pred cccceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc-ccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCC
Confidence 345789999999999999999999888776555544433222 2222222233333455788888888999999999999
Q ss_pred CccEEEECCCCCCC-CCC--CCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC
Q 022386 89 KLDILVNAAAGNFL-VPA--EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (298)
Q Consensus 89 ~id~li~~ag~~~~-~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~ 165 (298)
+.|++|||||...+ ... +..+.+.|.+.|+.|+++.+.+.+.++|.+++++- .+.+||+||.+...+.+.
T Consensus 82 kr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~-------~~~vVnvSS~aav~p~~~ 154 (253)
T KOG1204|consen 82 KRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPV-------NGNVVNVSSLAAVRPFSS 154 (253)
T ss_pred ceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCc-------cCeEEEecchhhhccccH
Confidence 99999999996543 222 35678999999999999999999999999998631 477999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc----CChHHHHHHHhhhccCCCCCCHHHHHHHHH
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK----LAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~ 241 (298)
|++||.+|+|.+++.+.+|.|- +.++++..+.||.++|+|+... ..+++....+......+++.+|...++.+.
T Consensus 155 wa~yc~~KaAr~m~f~~lA~EE--p~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~~ll~~~~~a~~l~ 232 (253)
T KOG1204|consen 155 WAAYCSSKAARNMYFMVLASEE--PFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESGQLLDPQVTAKVLA 232 (253)
T ss_pred HHHhhhhHHHHHHHHHHHhhcC--ccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcCCcCChhhHHHHHH
Confidence 9999999999999999999994 4699999999999999876432 234566677777777888999999999999
Q ss_pred HhcCCCCCCccccEEEe
Q 022386 242 YLASDAGKYVNGNTLIV 258 (298)
Q Consensus 242 ~L~s~~~~~~~G~~i~~ 258 (298)
.|+.... +.+|+.++.
T Consensus 233 ~L~e~~~-f~sG~~vdy 248 (253)
T KOG1204|consen 233 KLLEKGD-FVSGQHVDY 248 (253)
T ss_pred HHHHhcC-ccccccccc
Confidence 9986533 899997654
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.8e-25 Score=198.42 Aligned_cols=200 Identities=17% Similarity=0.205 Sum_probs=152.4
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
.++||+++||||++|||+++++.|+++|++|++++|+.+++++. +.....++..+.+|++|++++.+. ++
T Consensus 175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~---~~~~~~~v~~v~~Dvsd~~~v~~~-------l~ 244 (406)
T PRK07424 175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLE---INGEDLPVKTLHWQVGQEAALAEL-------LE 244 (406)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HhhcCCCeEEEEeeCCCHHHHHHH-------hC
Confidence 57899999999999999999999999999999999987654332 222234567889999999887654 35
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchh
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~ 168 (298)
++|++|||||.... .+.+.+++++.+++|+.+++.++++++|.|++++.. ..++.+|++|+ +. ...+..+.
T Consensus 245 ~IDiLInnAGi~~~---~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~----~~~~iiVn~Ss-a~-~~~~~~~~ 315 (406)
T PRK07424 245 KVDILIINHGINVH---GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDK----ATKEVWVNTSE-AE-VNPAFSPL 315 (406)
T ss_pred CCCEEEECCCcCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC----CCCeEEEEEcc-cc-ccCCCchH
Confidence 89999999997543 356889999999999999999999999999875410 01245677765 33 23344678
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCC
Q 022386 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (298)
Q Consensus 169 Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~ 248 (298)
|++||+|+..+++ +.++. .++.|..+.||+++|++. + ....+|+++|+.+++.++.+.
T Consensus 316 Y~ASKaAl~~l~~-l~~~~---~~~~I~~i~~gp~~t~~~-----------------~-~~~~spe~vA~~il~~i~~~~ 373 (406)
T PRK07424 316 YELSKRALGDLVT-LRRLD---APCVVRKLILGPFKSNLN-----------------P-IGVMSADWVAKQILKLAKRDF 373 (406)
T ss_pred HHHHHHHHHHHHH-HHHhC---CCCceEEEEeCCCcCCCC-----------------c-CCCCCHHHHHHHHHHHHHCCC
Confidence 9999999999985 44442 257777788999887631 1 124699999999999997654
Q ss_pred C
Q 022386 249 K 249 (298)
Q Consensus 249 ~ 249 (298)
.
T Consensus 374 ~ 374 (406)
T PRK07424 374 R 374 (406)
T ss_pred C
Confidence 3
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.1e-25 Score=230.84 Aligned_cols=182 Identities=18% Similarity=0.168 Sum_probs=160.2
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHc-CCcEEEEcCCh-------------------------------------------
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRK------------------------------------------- 46 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~-G~~Vv~~~r~~------------------------------------------- 46 (298)
+|+++|||||++|||.+++++|+++ |++|++++|+.
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence 4899999999999999999999998 69999999982
Q ss_pred ----hHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhH
Q 022386 47 ----TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 122 (298)
Q Consensus 47 ----~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 122 (298)
.+..+..+.+.+.+.++.++.||++|.++++++++++.+. ++||++|||||+...+.+.+.+.++|+++|++|+.
T Consensus 2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~ 2154 (2582)
T TIGR02813 2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVD 2154 (2582)
T ss_pred cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHH
Confidence 1122234445566788999999999999999999999877 68999999999988888889999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCc
Q 022386 123 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 202 (298)
Q Consensus 123 ~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~ 202 (298)
|++++++++.+.+. ++||++||..+..+.+++..|+++|++++.+++.++.++. ++||++|+||+
T Consensus 2155 G~~~Ll~al~~~~~------------~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~---~irV~sI~wG~ 2219 (2582)
T TIGR02813 2155 GLLSLLAALNAENI------------KLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNP---SAKVMSFNWGP 2219 (2582)
T ss_pred HHHHHHHHHHHhCC------------CeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcC---CcEEEEEECCe
Confidence 99999999876543 4599999999999999999999999999999999999975 59999999999
Q ss_pred ccCCcc
Q 022386 203 IKDTAG 208 (298)
Q Consensus 203 v~t~~~ 208 (298)
++|++.
T Consensus 2220 wdtgm~ 2225 (2582)
T TIGR02813 2220 WDGGMV 2225 (2582)
T ss_pred ecCCcc
Confidence 998754
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.5e-23 Score=167.98 Aligned_cols=175 Identities=21% Similarity=0.222 Sum_probs=148.4
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHH---HHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSA---VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~---~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
|+++||||++|||.+++++|+++|+ .|++++|+.+..+.. .+.++..+.++.++.+|++++++++++++.+...++
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG 80 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 5899999999999999999999997 577788875433322 345555567788999999999999999999998899
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchh
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~ 168 (298)
++|++||++|.....+..+.+.++++..+++|+.+++.+.+++.+ .+ .+++|+++|..+..+.+....
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~--------~~~ii~~ss~~~~~~~~~~~~ 148 (180)
T smart00822 81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRD----LP--------LDFFVLFSSVAGVLGNPGQAN 148 (180)
T ss_pred CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhcc----CC--------cceEEEEccHHHhcCCCCchh
Confidence 999999999987666777888999999999999999999998832 12 478999999998888888999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccc
Q 022386 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 204 (298)
Q Consensus 169 Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~ 204 (298)
|+++|.++..+++.++ ..|+++..+.||++.
T Consensus 149 y~~sk~~~~~~~~~~~-----~~~~~~~~~~~g~~~ 179 (180)
T smart00822 149 YAAANAFLDALAAHRR-----ARGLPATSINWGAWA 179 (180)
T ss_pred hHHHHHHHHHHHHHHH-----hcCCceEEEeecccc
Confidence 9999999999998764 336889999999874
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.91 E-value=5e-22 Score=176.52 Aligned_cols=243 Identities=18% Similarity=0.136 Sum_probs=168.0
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcC--CcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
|+||+++||||+|+||+++++.|+++| +.|++++|+......+...+. ..++.++.+|++|.+++.++++
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~l~~~~~------ 73 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP--APCLRFFIGDVRDKERLTRALR------ 73 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHh------
Confidence 578999999999999999999999987 689999988654433333332 2468899999999999888765
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
.+|++||+||.... +..+.++ .+.+++|+.+++++++++.+. + .++||++||.....+ ..
T Consensus 74 -~iD~Vih~Ag~~~~-~~~~~~~---~~~~~~Nv~g~~~ll~aa~~~----~--------~~~iV~~SS~~~~~p---~~ 133 (324)
T TIGR03589 74 -GVDYVVHAAALKQV-PAAEYNP---FECIRTNINGAQNVIDAAIDN----G--------VKRVVALSTDKAANP---IN 133 (324)
T ss_pred -cCCEEEECcccCCC-chhhcCH---HHHHHHHHHHHHHHHHHHHHc----C--------CCEEEEEeCCCCCCC---CC
Confidence 58999999996432 2222233 468999999999999998852 2 367999999755433 45
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhh---ccC------CCCCCHHHHHH
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY---MAA------YKFGEKWDIAM 238 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~---~~~------~~~~~~~dva~ 238 (298)
.|++||++.+.+++.++.++. ..|++++++.||.+..+.. .. .+.+....... .+. +.+...+|+++
T Consensus 134 ~Y~~sK~~~E~l~~~~~~~~~-~~gi~~~~lR~g~v~G~~~--~~-i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~ 209 (324)
T TIGR03589 134 LYGATKLASDKLFVAANNISG-SKGTRFSVVRYGNVVGSRG--SV-VPFFKSLKEEGVTELPITDPRMTRFWITLEQGVN 209 (324)
T ss_pred HHHHHHHHHHHHHHHHHhhcc-ccCcEEEEEeecceeCCCC--Cc-HHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHH
Confidence 799999999999999988776 6799999999999987642 11 12222222211 111 24679999999
Q ss_pred HHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhhhccCCCCCCC
Q 022386 239 AALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKSRDSPVGI 293 (298)
Q Consensus 239 ~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (298)
++..++... ..|+.+ +..+...+ ...+.+.+...+.....+.+.|.
T Consensus 210 a~~~al~~~---~~~~~~-~~~~~~~s-----v~el~~~i~~~~~~~~~~~~~g~ 255 (324)
T TIGR03589 210 FVLKSLERM---LGGEIF-VPKIPSMK-----ITDLAEAMAPECPHKIVGIRPGE 255 (324)
T ss_pred HHHHHHhhC---CCCCEE-ccCCCcEE-----HHHHHHHHHhhCCeeEeCCCCCc
Confidence 998888542 135655 43443322 23344444444443333334443
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.9e-23 Score=170.40 Aligned_cols=189 Identities=20% Similarity=0.218 Sum_probs=161.3
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCC-----cEEEEcCChhHHHHHHHHHHhCCC----CeEEEEccCCCHHHHHHHHH
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGA-----AIAIMGRRKTVLRSAVAALHSLGI----PAIGLEGDVRKREDAVRVVE 81 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~-----~Vv~~~r~~~~~~~~~~~~~~~~~----~~~~~~~Dls~~~~~~~~~~ 81 (298)
..|+++|||+++|||.++|++|++... ++++..|+-++.+++++.+.+..+ +++.+.+|+++..++.++..
T Consensus 2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~ 81 (341)
T KOG1478|consen 2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK 81 (341)
T ss_pred CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence 468999999999999999999998754 367789999999999999988644 57889999999999999999
Q ss_pred HHHHHhCCccEEEECCCCCCCCCC---------------------------CCCCHHHHHHHHHhhhHHHHHHHHHHHHH
Q 022386 82 STINHFGKLDILVNAAAGNFLVPA---------------------------EDLSPNGFRTVIEIDSVGTFIMCHEALKY 134 (298)
Q Consensus 82 ~~~~~~~~id~li~~ag~~~~~~~---------------------------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 134 (298)
++.++|.++|.+..|||+.....+ ...+.+++.++|+.|+.|++++.+.+.|.
T Consensus 82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl 161 (341)
T KOG1478|consen 82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL 161 (341)
T ss_pred HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence 999999999999999996543222 12345778999999999999999999999
Q ss_pred HHhcCCCCCCCCCCcEEEEecccccccCC---------CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccC
Q 022386 135 LKKGGRGQASSSSGGIIINISATLHYTAT---------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD 205 (298)
Q Consensus 135 ~~~~~~~~~~~~~~g~iv~vss~~~~~~~---------~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t 205 (298)
+..+. ...+|++||..+...+ .+..+|..||.+.+-+.-++-+.+. +.|+.-+.++||...|
T Consensus 162 l~~~~--------~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~-~~g~~qyvv~pg~~tt 232 (341)
T KOG1478|consen 162 LCHSD--------NPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFK-PLGINQYVVQPGIFTT 232 (341)
T ss_pred hhcCC--------CCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhcccc-ccchhhhcccCceeec
Confidence 99876 4589999998875432 4567899999999999999999986 8899999999999865
Q ss_pred Ccc
Q 022386 206 TAG 208 (298)
Q Consensus 206 ~~~ 208 (298)
.+.
T Consensus 233 ~~~ 235 (341)
T KOG1478|consen 233 NSF 235 (341)
T ss_pred chh
Confidence 443
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.2e-22 Score=184.96 Aligned_cols=226 Identities=12% Similarity=0.033 Sum_probs=166.1
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC-----C----CCeEEEEccCCCHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-----G----IPAIGLEGDVRKREDA 76 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-----~----~~~~~~~~Dls~~~~~ 76 (298)
.....+||+++||||+|+||++++++|+++|++|++++|+.+.++.+.+.+.+. + .++.++.+|+++.+++
T Consensus 74 ~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI 153 (576)
T PLN03209 74 ELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQI 153 (576)
T ss_pred ccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHH
Confidence 445667999999999999999999999999999999999988877776655431 1 3588999999999887
Q ss_pred HHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecc
Q 022386 77 VRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISA 156 (298)
Q Consensus 77 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss 156 (298)
++. ++++|+||||+|.... ...++...+++|+.+..++++++... + .++||++||
T Consensus 154 ~~a-------LggiDiVVn~AG~~~~------~v~d~~~~~~VN~~Gt~nLl~Aa~~a----g--------VgRIV~VSS 208 (576)
T PLN03209 154 GPA-------LGNASVVICCIGASEK------EVFDVTGPYRIDYLATKNLVDAATVA----K--------VNHFILVTS 208 (576)
T ss_pred HHH-------hcCCCEEEEccccccc------cccchhhHHHHHHHHHHHHHHHHHHh----C--------CCEEEEEcc
Confidence 654 4689999999986421 11246778999999999999988643 2 478999999
Q ss_pred cccc-cCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHH
Q 022386 157 TLHY-TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 235 (298)
Q Consensus 157 ~~~~-~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 235 (298)
..+. .+.+. ..|. +|.++..+.+.+..++. .+||+++.|+||++.+++.... ..... .......+.++..+.+|
T Consensus 209 iga~~~g~p~-~~~~-sk~~~~~~KraaE~~L~-~sGIrvTIVRPG~L~tp~d~~~-~t~~v-~~~~~d~~~gr~isreD 283 (576)
T PLN03209 209 LGTNKVGFPA-AILN-LFWGVLCWKRKAEEALI-ASGLPYTIVRPGGMERPTDAYK-ETHNL-TLSEEDTLFGGQVSNLQ 283 (576)
T ss_pred chhcccCccc-cchh-hHHHHHHHHHHHHHHHH-HcCCCEEEEECCeecCCccccc-cccce-eeccccccCCCccCHHH
Confidence 8764 23222 2344 78888888888888887 7799999999999986632211 01111 11112245677889999
Q ss_pred HHHHHHHhcCCCCCCccccEEEeCCCC
Q 022386 236 IAMAALYLASDAGKYVNGNTLIVDGGN 262 (298)
Q Consensus 236 va~~~~~L~s~~~~~~~G~~i~~dgG~ 262 (298)
||+.++||++++.. -.++++.+-.+.
T Consensus 284 VA~vVvfLasd~~a-s~~kvvevi~~~ 309 (576)
T PLN03209 284 VAELMACMAKNRRL-SYCKVVEVIAET 309 (576)
T ss_pred HHHHHHHHHcCchh-ccceEEEEEeCC
Confidence 99999999985422 235677765553
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-21 Score=172.87 Aligned_cols=222 Identities=16% Similarity=0.075 Sum_probs=159.5
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC--CCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
++|++|||||+|+||++++++|+++|++|+++.|+....+......... ..++.++.+|+++.++++++++
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------- 76 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID------- 76 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------
Confidence 3799999999999999999999999999999888866544432222211 2468899999999998888775
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC----
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW---- 164 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~---- 164 (298)
++|++||+||.... ..+.+.+.+.+++|+.+++++++++.+.+. .++||++||..++.+..
T Consensus 77 ~~d~vih~A~~~~~----~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~-----------~~~iv~~SS~~~~~~~~~~~~ 141 (325)
T PLN02989 77 GCETVFHTASPVAI----TVKTDPQVELINPAVNGTINVLRTCTKVSS-----------VKRVILTSSMAAVLAPETKLG 141 (325)
T ss_pred CCCEEEEeCCCCCC----CCCCChHHHHHHHHHHHHHHHHHHHHHcCC-----------ceEEEEecchhheecCCccCC
Confidence 58999999996421 223345788999999999999999887542 36799999976543210
Q ss_pred ------------------CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC--ChHHHHHHHhhh
Q 022386 165 ------------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL--APEEIRSKATDY 224 (298)
Q Consensus 165 ------------------~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~--~~~~~~~~~~~~ 224 (298)
....|+.||.+.+.+++.++.+. |+.++.+.|+.+..+...... ............
T Consensus 142 ~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~ 217 (325)
T PLN02989 142 PNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDN----EIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGK 217 (325)
T ss_pred CCCccCcCCCCchhHhcccccchHHHHHHHHHHHHHHHHHc----CCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCC
Confidence 01369999999999999887664 699999999999887543321 111222212222
Q ss_pred ccC----CCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCC
Q 022386 225 MAA----YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 261 (298)
Q Consensus 225 ~~~----~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG 261 (298)
.+. +.+...+|+|+++..++.... . +..++++|+
T Consensus 218 ~~~~~~~r~~i~v~Dva~a~~~~l~~~~--~-~~~~ni~~~ 255 (325)
T PLN02989 218 NPFNTTHHRFVDVRDVALAHVKALETPS--A-NGRYIIDGP 255 (325)
T ss_pred CCCCCcCcCeeEHHHHHHHHHHHhcCcc--c-CceEEEecC
Confidence 222 356788999999998886432 1 336788543
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.7e-22 Score=163.33 Aligned_cols=174 Identities=22% Similarity=0.266 Sum_probs=139.5
Q ss_pred EEEEecCCchhHHHHHHHHHHcCC-cEEEEcCCh---hHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK---TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~---~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
++|||||++|||..+++.|+++|+ +|++++|+. ...++..+++.+.+.++..++||++|+++++++++.+.+++++
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~ 81 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP 81 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence 799999999999999999999987 799999992 3456778888888999999999999999999999999999999
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhh
Q 022386 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 169 (298)
Q Consensus 90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y 169 (298)
|+++||+||.....++.+.+.++++..+...+.+.+++.+++.+.- -..+|.+||..+..+.++...|
T Consensus 82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~------------l~~~i~~SSis~~~G~~gq~~Y 149 (181)
T PF08659_consen 82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRP------------LDFFILFSSISSLLGGPGQSAY 149 (181)
T ss_dssp EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTT------------TSEEEEEEEHHHHTT-TTBHHH
T ss_pred cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCC------------CCeEEEECChhHhccCcchHhH
Confidence 9999999999888889999999999999999999999999887611 3569999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccc
Q 022386 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 204 (298)
Q Consensus 170 ~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~ 204 (298)
+++.+.++.+++..... |.++.+|+.|..+
T Consensus 150 aaAN~~lda~a~~~~~~-----g~~~~sI~wg~W~ 179 (181)
T PF08659_consen 150 AAANAFLDALARQRRSR-----GLPAVSINWGAWD 179 (181)
T ss_dssp HHHHHHHHHHHHHHHHT-----TSEEEEEEE-EBS
T ss_pred HHHHHHHHHHHHHHHhC-----CCCEEEEEccccC
Confidence 99999999999876442 5778888888764
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.8e-21 Score=171.07 Aligned_cols=231 Identities=16% Similarity=0.109 Sum_probs=163.3
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
++||++|||||+|+||.++++.|+++|++|++++|+..........+. .+.++.++.+|+++.+++.+++++. +
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~-----~ 75 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLN-LAKKIEDHFGDIRDAAKLRKAIAEF-----K 75 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHh-hcCCceEEEccCCCHHHHHHHHhhc-----C
Confidence 568999999999999999999999999999999988654433333332 2345778999999999999988853 6
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc--------
Q 022386 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-------- 161 (298)
Q Consensus 90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~-------- 161 (298)
+|++||+|+.... ..+.+++...+++|+.+++.+++++... .. .+++|++||...+.
T Consensus 76 ~d~vih~A~~~~~----~~~~~~~~~~~~~N~~g~~~ll~a~~~~---~~--------~~~iv~~SS~~vyg~~~~~~~~ 140 (349)
T TIGR02622 76 PEIVFHLAAQPLV----RKSYADPLETFETNVMGTVNLLEAIRAI---GS--------VKAVVNVTSDKCYRNDEWVWGY 140 (349)
T ss_pred CCEEEECCccccc----ccchhCHHHHHHHhHHHHHHHHHHHHhc---CC--------CCEEEEEechhhhCCCCCCCCC
Confidence 8999999985322 2344567788999999999999987531 11 35799999864331
Q ss_pred ----CCCCchhhHHHHHHHHHHHHHHHHHhcCC---CCeEEEEEeCCcccCCcccCc-CChHHHHHHHhh--------hc
Q 022386 162 ----ATWYQIHVSAAKAAVDSITRSLALEWGTD---YAIRVNGIAPGPIKDTAGVSK-LAPEEIRSKATD--------YM 225 (298)
Q Consensus 162 ----~~~~~~~Y~~sK~a~~~l~~~la~e~~~~---~girv~~i~PG~v~t~~~~~~-~~~~~~~~~~~~--------~~ 225 (298)
+..+...|+.||.+++.+++.++.++... .|++++.+.|+.+..+..... ..-+.+...... ..
T Consensus 141 ~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~ 220 (349)
T TIGR02622 141 RETDPLGGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPD 220 (349)
T ss_pred ccCCCCCCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCC
Confidence 11235689999999999999998887411 389999999999987642111 111222222221 11
Q ss_pred cCCCCCCHHHHHHHHHHhcCCC--CCCccccEEEeCCC
Q 022386 226 AAYKFGEKWDIAMAALYLASDA--GKYVNGNTLIVDGG 261 (298)
Q Consensus 226 ~~~~~~~~~dva~~~~~L~s~~--~~~~~G~~i~~dgG 261 (298)
..+.+...+|++++++.++... .....|+.+++.+|
T Consensus 221 ~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~ 258 (349)
T TIGR02622 221 ATRPWQHVLEPLSGYLLLAEKLFTGQAEFAGAWNFGPR 258 (349)
T ss_pred cccceeeHHHHHHHHHHHHHHHhhcCccccceeeeCCC
Confidence 2345678889999998776421 11123578999765
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.5e-20 Score=162.72 Aligned_cols=183 Identities=17% Similarity=0.119 Sum_probs=138.7
Q ss_pred CCcEEEEecCCchhHHH--HHHHHHHcCCcEEEEcCChhH------------HHHHHHHHHhCCCCeEEEEccCCCHHHH
Q 022386 11 KGKVALLTGGGSGIGFE--ISLQLGKHGAAIAIMGRRKTV------------LRSAVAALHSLGIPAIGLEGDVRKREDA 76 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~--ia~~l~~~G~~Vv~~~r~~~~------------~~~~~~~~~~~~~~~~~~~~Dls~~~~~ 76 (298)
.||++||||+++|||.+ +|+.| +.|++|+++++..+. .+.+.+.+.+.+..+..+.||+++++++
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v 118 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIK 118 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence 37999999999999999 89999 999998888753322 1234445555566778899999999999
Q ss_pred HHHHHHHHHHhCCccEEEECCCCCCCCC-----------------CC-----------------CCCHHHHHHHHHhhhH
Q 022386 77 VRVVESTINHFGKLDILVNAAAGNFLVP-----------------AE-----------------DLSPNGFRTVIEIDSV 122 (298)
Q Consensus 77 ~~~~~~~~~~~~~id~li~~ag~~~~~~-----------------~~-----------------~~~~~~~~~~~~~n~~ 122 (298)
+++++.+.+.||++|+||||++...... +. ..+.++++.+ +++.
T Consensus 119 ~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~T--v~vM 196 (398)
T PRK13656 119 QKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADT--VKVM 196 (398)
T ss_pred HHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHH--HHhh
Confidence 9999999999999999999999653211 10 1223334333 3344
Q ss_pred HH-----HHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc--hhhHHHHHHHHHHHHHHHHHhcCCCCeEE
Q 022386 123 GT-----FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ--IHVSAAKAAVDSITRSLALEWGTDYAIRV 195 (298)
Q Consensus 123 ~~-----~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~--~~Y~~sK~a~~~l~~~la~e~~~~~girv 195 (298)
|. |.-.....+.|.+ ++++|.+|........|.+ ..-+.+|++++.-++.++.+|+ +.|||+
T Consensus 197 ggedw~~Wi~al~~a~lla~----------g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~-~~gira 265 (398)
T PRK13656 197 GGEDWELWIDALDEAGVLAE----------GAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLA-AKGGDA 265 (398)
T ss_pred ccchHHHHHHHHHhcccccC----------CcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhh-hcCCEE
Confidence 43 2223444444533 6889999998887766655 4779999999999999999998 889999
Q ss_pred EEEeCCcccCCc
Q 022386 196 NGIAPGPIKDTA 207 (298)
Q Consensus 196 ~~i~PG~v~t~~ 207 (298)
|++++|.+.|..
T Consensus 266 n~i~~g~~~T~A 277 (398)
T PRK13656 266 YVSVLKAVVTQA 277 (398)
T ss_pred EEEecCcccchh
Confidence 999999999864
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.1e-19 Score=161.75 Aligned_cols=244 Identities=18% Similarity=0.116 Sum_probs=163.2
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEE-EcCChhH--HHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTV--LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~-~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
|++|||||+|+||.++++.|+++|+.+++ +++.... ..... .+ ..+.++.++.+|++|.++++++++. .+
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~ 74 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLA-PV-AQSERFAFEKVDICDRAELARVFTE-----HQ 74 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhh-hc-ccCCceEEEECCCcChHHHHHHHhh-----cC
Confidence 58999999999999999999999997554 4543221 11111 11 1234577889999999999988875 26
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc--------
Q 022386 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-------- 161 (298)
Q Consensus 90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~-------- 161 (298)
+|++||+||.... ..+.+.++..+++|+.+++++++++.+.+..-... .....++|++||...+.
T Consensus 75 ~D~Vih~A~~~~~----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~---~~~~~~~i~~SS~~vyg~~~~~~~~ 147 (355)
T PRK10217 75 PDCVMHLAAESHV----DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTED---KKSAFRFHHISTDEVYGDLHSTDDF 147 (355)
T ss_pred CCEEEECCcccCc----chhhhChHHHHHHhhHHHHHHHHHHHHhhhccccc---ccCceEEEEecchhhcCCCCCCCCC
Confidence 9999999986432 22345678899999999999999998764311000 00024799998864321
Q ss_pred -----CCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhc--c-------C
Q 022386 162 -----ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM--A-------A 227 (298)
Q Consensus 162 -----~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~--~-------~ 227 (298)
+..+...|+.||.+.+.+++.+++++ ++++..+.|+.+..+.......-..+........ + .
T Consensus 148 ~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~----~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~ 223 (355)
T PRK10217 148 FTETTPYAPSSPYSASKASSDHLVRAWLRTY----GLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQI 223 (355)
T ss_pred cCCCCCCCCCChhHHHHHHHHHHHHHHHHHh----CCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCee
Confidence 11245689999999999999998775 5888889999988764321111122222222111 1 2
Q ss_pred CCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhh
Q 022386 228 YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAV 282 (298)
Q Consensus 228 ~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~ 282 (298)
+.+...+|+++++..++... ..|+.+++.+|..++ ...+.+.+.+.+
T Consensus 224 ~~~i~v~D~a~a~~~~~~~~---~~~~~yni~~~~~~s-----~~~~~~~i~~~~ 270 (355)
T PRK10217 224 RDWLYVEDHARALYCVATTG---KVGETYNIGGHNERK-----NLDVVETICELL 270 (355)
T ss_pred eCcCcHHHHHHHHHHHHhcC---CCCCeEEeCCCCccc-----HHHHHHHHHHHh
Confidence 35788999999998887542 247889998886654 344444444443
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.5e-19 Score=159.15 Aligned_cols=238 Identities=18% Similarity=0.126 Sum_probs=162.5
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHh--CCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS--LGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
-.||+++||||+|+||.+++++|+++|++|+++.|+....+........ ...++.++.+|+++.++++++++
T Consensus 3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------ 76 (322)
T PLN02986 3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE------ 76 (322)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh------
Confidence 5689999999999999999999999999999888886544433332221 12468889999999998888776
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc-CC---
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-AT--- 163 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~-~~--- 163 (298)
.+|++||+|+..... . .+...+.+++|+.++.++++++.... . -++||++||..... +.
T Consensus 77 -~~d~vih~A~~~~~~---~--~~~~~~~~~~nv~gt~~ll~~~~~~~---~--------v~rvV~~SS~~~~~~~~~~~ 139 (322)
T PLN02986 77 -GCDAVFHTASPVFFT---V--KDPQTELIDPALKGTINVLNTCKETP---S--------VKRVILTSSTAAVLFRQPPI 139 (322)
T ss_pred -CCCEEEEeCCCcCCC---C--CCchhhhhHHHHHHHHHHHHHHHhcC---C--------ccEEEEecchhheecCCccC
Confidence 589999999863221 1 12235678999999999999876421 1 25699999976431 11
Q ss_pred -------------C-----CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC-hHHHHHHHhhh
Q 022386 164 -------------W-----YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDY 224 (298)
Q Consensus 164 -------------~-----~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~-~~~~~~~~~~~ 224 (298)
+ ....|+.||.+.+.+++.+.++. |++++.+.|+.+.++....... .......+...
T Consensus 140 ~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~----~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g 215 (322)
T PLN02986 140 EANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDN----GIDMVVLNPGFICGPLLQPTLNFSVELIVDFING 215 (322)
T ss_pred CCCCCcCcccCCChHHhhccccchHHHHHHHHHHHHHHHHHh----CCeEEEEcccceeCCCCCCCCCccHHHHHHHHcC
Confidence 0 12469999999999999886663 6999999999998875432211 11222222211
Q ss_pred c-----cCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhh
Q 022386 225 M-----AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVE 283 (298)
Q Consensus 225 ~-----~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~ 283 (298)
. ..+.+...+|+|++++.++..+. ..| .++++ |..++ ...+.+.+.+.+.
T Consensus 216 ~~~~~~~~~~~v~v~Dva~a~~~al~~~~--~~~-~yni~-~~~~s-----~~e~~~~i~~~~~ 270 (322)
T PLN02986 216 KNLFNNRFYRFVDVRDVALAHIKALETPS--ANG-RYIID-GPIMS-----VNDIIDILRELFP 270 (322)
T ss_pred CCCCCCcCcceeEHHHHHHHHHHHhcCcc--cCC-cEEEe-cCCCC-----HHHHHHHHHHHCC
Confidence 1 12357899999999998886532 224 67784 43333 3444555544443
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.7e-20 Score=147.45 Aligned_cols=149 Identities=26% Similarity=0.278 Sum_probs=122.7
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
+.|++|+++||||++|||+++++.|+++|++|++++++.+..++..+++...+.++.++.+|+++.++++++++++.+.|
T Consensus 12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~ 91 (169)
T PRK06720 12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAF 91 (169)
T ss_pred cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 45789999999999999999999999999999999999887777777777667778889999999999999999999999
Q ss_pred CCccEEEECCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc
Q 022386 88 GKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 160 (298)
Q Consensus 88 ~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~ 160 (298)
|++|++|||||+... .++++.+.++ ++ .+|+.+.++.++.+.+.|.++.. .-..+..|++..||+.+..
T Consensus 92 G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 161 (169)
T PRK06720 92 SRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQE-EVVLSDLPIFGIIGTKGQS 161 (169)
T ss_pred CCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCC-EEEeecCceeeEecccccc
Confidence 999999999998654 4444444444 33 77888889999999999887642 2224457888888886543
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.8e-19 Score=160.02 Aligned_cols=236 Identities=16% Similarity=0.071 Sum_probs=156.4
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHH-HHHHHHHH----hCCCCeEEEEccCCCHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVL-RSAVAALH----SLGIPAIGLEGDVRKREDAVRVVE 81 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~-~~~~~~~~----~~~~~~~~~~~Dls~~~~~~~~~~ 81 (298)
+.++++|++|||||+|+||.+++++|+++|++|++++|+.+.. ....+.+. ..+.++.++.+|++|.++++++++
T Consensus 1 ~~~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 80 (340)
T PLN02653 1 PGDPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLD 80 (340)
T ss_pred CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHH
Confidence 3678899999999999999999999999999999998875321 11112221 123458899999999999999888
Q ss_pred HHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc
Q 022386 82 STINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 161 (298)
Q Consensus 82 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~ 161 (298)
.. .+|++||+|+..... ...+.....+++|+.++.++++++.+...+++. -.++|++||...+.
T Consensus 81 ~~-----~~d~Vih~A~~~~~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~-------~~~~v~~Ss~~vyg 144 (340)
T PLN02653 81 DI-----KPDEVYNLAAQSHVA----VSFEMPDYTADVVATGALRLLEAVRLHGQETGR-------QIKYYQAGSSEMYG 144 (340)
T ss_pred Hc-----CCCEEEECCcccchh----hhhhChhHHHHHHHHHHHHHHHHHHHhcccccc-------ceeEEEeccHHHhC
Confidence 64 599999999964321 122345677899999999999999988754210 12588888754332
Q ss_pred C----------CCCchhhHHHHHHHHHHHHHHHHHhcC--CCCeEEEEEeCCcccCCcccCcCChHHHHHHHhh------
Q 022386 162 A----------TWYQIHVSAAKAAVDSITRSLALEWGT--DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD------ 223 (298)
Q Consensus 162 ~----------~~~~~~Y~~sK~a~~~l~~~la~e~~~--~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~------ 223 (298)
. ..+...|+.||.+.+.+++.++.+++. ..++.++.+.|+...+. .... -..+...+..
T Consensus 145 ~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~--~~~~-~~~~~~~~~~~~~~~~ 221 (340)
T PLN02653 145 STPPPQSETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENF--VTRK-ITRAVGRIKVGLQKKL 221 (340)
T ss_pred CCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCccc--chhH-HHHHHHHHHcCCCCce
Confidence 1 113567999999999999999887641 01233344445432110 0000 0111111111
Q ss_pred ----hccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 224 ----YMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 224 ----~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
....+.+...+|++++++.++... .+..+++.+|..++
T Consensus 222 ~~g~g~~~rd~i~v~D~a~a~~~~~~~~----~~~~yni~~g~~~s 263 (340)
T PLN02653 222 FLGNLDASRDWGFAGDYVEAMWLMLQQE----KPDDYVVATEESHT 263 (340)
T ss_pred EeCCCcceecceeHHHHHHHHHHHHhcC----CCCcEEecCCCcee
Confidence 112245679999999999888642 14568888886664
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.5e-19 Score=163.49 Aligned_cols=235 Identities=15% Similarity=0.117 Sum_probs=161.3
Q ss_pred CCCCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh---H----H---------HHHHHHHH-hCCCCeEE
Q 022386 3 SPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT---V----L---------RSAVAALH-SLGIPAIG 65 (298)
Q Consensus 3 ~~~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~---~----~---------~~~~~~~~-~~~~~~~~ 65 (298)
-|-+...+++|++|||||+|+||++++++|+++|++|+++++... . . .+..+.+. ..+.++.+
T Consensus 38 ~~~~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~ 117 (442)
T PLN02572 38 APGSSSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIEL 117 (442)
T ss_pred CCCCCccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceE
Confidence 345667889999999999999999999999999999999874321 0 0 00111111 12346889
Q ss_pred EEccCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCC
Q 022386 66 LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASS 145 (298)
Q Consensus 66 ~~~Dls~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ 145 (298)
+.+|++|.++++++++.. ++|++||+|+... .+....++++++..+++|+.+++++++++...-.
T Consensus 118 v~~Dl~d~~~v~~~l~~~-----~~D~ViHlAa~~~-~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv--------- 182 (442)
T PLN02572 118 YVGDICDFEFLSEAFKSF-----EPDAVVHFGEQRS-APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAP--------- 182 (442)
T ss_pred EECCCCCHHHHHHHHHhC-----CCCEEEECCCccc-ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCC---------
Confidence 999999999999988753 6999999997532 2333445566788899999999999999876422
Q ss_pred CCCcEEEEecccccccC------------------------CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCC
Q 022386 146 SSGGIIINISATLHYTA------------------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 201 (298)
Q Consensus 146 ~~~g~iv~vss~~~~~~------------------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG 201 (298)
..++|++||...+.. ..+...|+.||.+.+.+++.++..+ |+++..+.|+
T Consensus 183 --~~~~V~~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~----gl~~v~lR~~ 256 (442)
T PLN02572 183 --DCHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW----GIRATDLNQG 256 (442)
T ss_pred --CccEEEEecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhc----CCCEEEEecc
Confidence 135999988754321 1123579999999999998876664 6999999999
Q ss_pred cccCCcccCcC-----------------ChHHHHHHHhhhc---------cCCCCCCHHHHHHHHHHhcCCCCCCccc--
Q 022386 202 PIKDTAGVSKL-----------------APEEIRSKATDYM---------AAYKFGEKWDIAMAALYLASDAGKYVNG-- 253 (298)
Q Consensus 202 ~v~t~~~~~~~-----------------~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~L~s~~~~~~~G-- 253 (298)
.+..+...... ....+........ ..+.+...+|+++++..++.... ..|
T Consensus 257 ~vyGp~~~~~~~~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~--~~g~~ 334 (442)
T PLN02572 257 VVYGVRTDETMMDEELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPA--KPGEF 334 (442)
T ss_pred cccCCCCcccccccccccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChh--hcCce
Confidence 99877532210 0011111111111 12367789999999988886421 234
Q ss_pred cEEEeCC
Q 022386 254 NTLIVDG 260 (298)
Q Consensus 254 ~~i~~dg 260 (298)
.++++.+
T Consensus 335 ~i~Nigs 341 (442)
T PLN02572 335 RVFNQFT 341 (442)
T ss_pred eEEEeCC
Confidence 4677743
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.3e-19 Score=154.06 Aligned_cols=205 Identities=9% Similarity=-0.005 Sum_probs=144.3
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh--HHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT--VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
.+|+++||||+|+||++++++|+++|++|+++.|+.. ...+....+...+.++.++.+|++|.+++.+++.
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~------- 77 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK------- 77 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc-------
Confidence 4689999999999999999999999999999988632 2222223332223468889999999988876553
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC----C
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----W 164 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~----~ 164 (298)
..|+++|.++.... .. ..+++.+++|+.+++++++++.+.+. .++||++||..+.... +
T Consensus 78 ~~d~v~~~~~~~~~-----~~-~~~~~~~~~nv~gt~~ll~aa~~~~~-----------v~riV~~SS~~a~~~~~~~~~ 140 (297)
T PLN02583 78 GCSGLFCCFDPPSD-----YP-SYDEKMVDVEVRAAHNVLEACAQTDT-----------IEKVVFTSSLTAVIWRDDNIS 140 (297)
T ss_pred CCCEEEEeCccCCc-----cc-ccHHHHHHHHHHHHHHHHHHHHhcCC-----------ccEEEEecchHheecccccCC
Confidence 68888887653211 11 24678999999999999999987642 2569999997653211 0
Q ss_pred --------Cc----------hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhh--
Q 022386 165 --------YQ----------IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY-- 224 (298)
Q Consensus 165 --------~~----------~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~-- 224 (298)
.+ ..|+.||...+.+++.++++. |++++.|+|+.|..+...... .........
T Consensus 141 ~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~~----gi~~v~lrp~~v~Gp~~~~~~---~~~~~~~~~~~ 213 (297)
T PLN02583 141 TQKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMDR----GVNMVSINAGLLMGPSLTQHN---PYLKGAAQMYE 213 (297)
T ss_pred CCCCCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHHh----CCcEEEEcCCcccCCCCCCch---hhhcCCcccCc
Confidence 01 159999999999998886653 699999999999877432211 011100000
Q ss_pred ccCCCCCCHHHHHHHHHHhcCC
Q 022386 225 MAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 225 ~~~~~~~~~~dva~~~~~L~s~ 246 (298)
.....+.+.+|+|++++..+..
T Consensus 214 ~~~~~~v~V~Dva~a~~~al~~ 235 (297)
T PLN02583 214 NGVLVTVDVNFLVDAHIRAFED 235 (297)
T ss_pred ccCcceEEHHHHHHHHHHHhcC
Confidence 0112477899999999988864
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.8e-18 Score=154.91 Aligned_cols=220 Identities=13% Similarity=0.053 Sum_probs=154.5
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHH-HHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRS-AVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
....+++|+++||||+|+||.+++++|+++|++|+++.|+.+.... ....+.....++.++.+|+++.+++.++++
T Consensus 4 ~~~~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--- 80 (342)
T PLN02214 4 DVASPAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID--- 80 (342)
T ss_pred ccccCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh---
Confidence 3445678999999999999999999999999999999998654222 122332223458889999999998888775
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC-
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT- 163 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~- 163 (298)
++|++||+|+... +++.+.+++|+.++.++++++... + -++||++||..+..+.
T Consensus 81 ----~~d~Vih~A~~~~---------~~~~~~~~~nv~gt~~ll~aa~~~----~--------v~r~V~~SS~~avyg~~ 135 (342)
T PLN02214 81 ----GCDGVFHTASPVT---------DDPEQMVEPAVNGAKFVINAAAEA----K--------VKRVVITSSIGAVYMDP 135 (342)
T ss_pred ----cCCEEEEecCCCC---------CCHHHHHHHHHHHHHHHHHHHHhc----C--------CCEEEEeccceeeeccC
Confidence 5899999998531 134678999999999999998743 1 2469999996533211
Q ss_pred ---C-----------------CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCCh--HHHHHHH
Q 022386 164 ---W-----------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP--EEIRSKA 221 (298)
Q Consensus 164 ---~-----------------~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~--~~~~~~~ 221 (298)
+ ....|+.||.+.+.+++.++.+. |+++..+.|+.+..+........ ..+....
T Consensus 136 ~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~----g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~ 211 (342)
T PLN02214 136 NRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEK----GVDLVVLNPVLVLGPPLQPTINASLYHVLKYL 211 (342)
T ss_pred CCCCCcccCcccCCChhhccccccHHHHHHHHHHHHHHHHHHHc----CCcEEEEeCCceECCCCCCCCCchHHHHHHHH
Confidence 0 12469999999999999887764 69999999999988754322111 1111111
Q ss_pred hhhc-----cCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCC
Q 022386 222 TDYM-----AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDG 260 (298)
Q Consensus 222 ~~~~-----~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dg 260 (298)
.... ..+.+...+|+|++++.++.... ..| .+++.+
T Consensus 212 ~g~~~~~~~~~~~~i~V~Dva~a~~~al~~~~--~~g-~yn~~~ 252 (342)
T PLN02214 212 TGSAKTYANLTQAYVDVRDVALAHVLVYEAPS--ASG-RYLLAE 252 (342)
T ss_pred cCCcccCCCCCcCeeEHHHHHHHHHHHHhCcc--cCC-cEEEec
Confidence 1111 12356789999999998885431 224 556643
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.83 E-value=2e-18 Score=155.16 Aligned_cols=208 Identities=13% Similarity=0.053 Sum_probs=149.8
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC--CCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
+.|++|||||+|+||.+++++|+++|++|++++|+.+............ ..++.++.+|+++.+.++++++
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~------- 76 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR------- 76 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------
Confidence 4689999999999999999999999999999998865554443322211 2357889999999988887765
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC----C
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----W 164 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~----~ 164 (298)
.+|++||+|+..... .. +.....+++|+.+++++++++.+... .++||++||...+.+. +
T Consensus 77 ~~d~ViH~A~~~~~~---~~--~~~~~~~~~Nv~gt~~ll~aa~~~~~-----------~~r~v~~SS~~~~~~~~~~~~ 140 (351)
T PLN02650 77 GCTGVFHVATPMDFE---SK--DPENEVIKPTVNGMLSIMKACAKAKT-----------VRRIVFTSSAGTVNVEEHQKP 140 (351)
T ss_pred CCCEEEEeCCCCCCC---CC--CchhhhhhHHHHHHHHHHHHHHhcCC-----------ceEEEEecchhhcccCCCCCC
Confidence 589999999853211 11 22357789999999999999886531 2469999987433210 0
Q ss_pred ------------------CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHH---hh
Q 022386 165 ------------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA---TD 223 (298)
Q Consensus 165 ------------------~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~---~~ 223 (298)
+...|+.||.+.+.+++.++.++ |++++.+.|+.+.++.......+ .+.... ..
T Consensus 141 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi~~~ilRp~~v~Gp~~~~~~~~-~~~~~~~~~~~ 215 (351)
T PLN02650 141 VYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAEN----GLDFISIIPTLVVGPFISTSMPP-SLITALSLITG 215 (351)
T ss_pred ccCcccCCchhhhhccccccchHHHHHHHHHHHHHHHHHHc----CCeEEEECCCceECCCCCCCCCc-cHHHHHHHhcC
Confidence 11369999999999999987764 69999999999988754332221 111111 01
Q ss_pred ------hccCCCCCCHHHHHHHHHHhcCC
Q 022386 224 ------YMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 224 ------~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
....+.+...+|+++++.+++..
T Consensus 216 ~~~~~~~~~~r~~v~V~Dva~a~~~~l~~ 244 (351)
T PLN02650 216 NEAHYSIIKQGQFVHLDDLCNAHIFLFEH 244 (351)
T ss_pred CccccCcCCCcceeeHHHHHHHHHHHhcC
Confidence 01224688999999999999864
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.83 E-value=5e-18 Score=152.76 Aligned_cols=216 Identities=15% Similarity=0.049 Sum_probs=152.6
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
-..+++++|||||+|+||.+++++|+++|++|++++|+....+...+.+.. +.++.++.+|+++.+++.++++
T Consensus 6 ~~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~------ 78 (353)
T PLN02896 6 RESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE-GDRLRLFRADLQEEGSFDEAVK------ 78 (353)
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc-CCeEEEEECCCCCHHHHHHHHc------
Confidence 345678999999999999999999999999999999987655555444432 4568899999999998887764
Q ss_pred CCccEEEECCCCCCCCC-CCCCCHHHH--HHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC-
Q 022386 88 GKLDILVNAAAGNFLVP-AEDLSPNGF--RTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT- 163 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~-~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~- 163 (298)
.+|++||+|+...... ....+++.+ ...++.|+.++.++++++.+... .++||++||...+...
T Consensus 79 -~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~-----------~~~~v~~SS~~vyg~~~ 146 (353)
T PLN02896 79 -GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKT-----------VKRVVFTSSISTLTAKD 146 (353)
T ss_pred -CCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCC-----------ccEEEEEechhhccccc
Confidence 5899999999654321 122233333 45678888999999998876531 2569999996554211
Q ss_pred ------------------------CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCCh--HHH
Q 022386 164 ------------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP--EEI 217 (298)
Q Consensus 164 ------------------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~--~~~ 217 (298)
+....|+.||.+.+.+++.++.+. |+++..+.|+.+..+......+. ...
T Consensus 147 ~~~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~lR~~~vyGp~~~~~~~~~~~~~ 222 (353)
T PLN02896 147 SNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN----GIDLVSVITTTVAGPFLTPSVPSSIQVL 222 (353)
T ss_pred cCCCCCCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHc----CCeEEEEcCCcccCCCcCCCCCchHHHH
Confidence 011379999999999999887764 69999999999988754322211 111
Q ss_pred HHHHhhhcc-------------CCCCCCHHHHHHHHHHhcCC
Q 022386 218 RSKATDYMA-------------AYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 218 ~~~~~~~~~-------------~~~~~~~~dva~~~~~L~s~ 246 (298)
...+..... .+.+...+|++++++.++..
T Consensus 223 ~~~~~g~~~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~ 264 (353)
T PLN02896 223 LSPITGDSKLFSILSAVNSRMGSIALVHIEDICDAHIFLMEQ 264 (353)
T ss_pred HHHhcCCccccccccccccccCceeEEeHHHHHHHHHHHHhC
Confidence 111101000 12467999999999988853
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.6e-18 Score=150.64 Aligned_cols=211 Identities=15% Similarity=0.065 Sum_probs=148.0
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHH--HHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVA--ALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~--~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
-.+++++++||||+|+||.+++++|+++|++|+++.|+.+....... .+.. .+++.++.+|++|.+++.++++
T Consensus 5 ~~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~---- 79 (338)
T PLN00198 5 TPTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQE-LGDLKIFGADLTDEESFEAPIA---- 79 (338)
T ss_pred cCCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCC-CCceEEEEcCCCChHHHHHHHh----
Confidence 35568999999999999999999999999999988887543332221 1211 1358889999999988887764
Q ss_pred HhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC--
Q 022386 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-- 163 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~-- 163 (298)
++|++||+|+... .. ..+.+...+++|+.++.++++++.... + .+++|++||...+...
T Consensus 80 ---~~d~vih~A~~~~---~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~---~--------~~~~v~~SS~~~~g~~~~ 140 (338)
T PLN00198 80 ---GCDLVFHVATPVN---FA--SEDPENDMIKPAIQGVHNVLKACAKAK---S--------VKRVILTSSAAAVSINKL 140 (338)
T ss_pred ---cCCEEEEeCCCCc---cC--CCChHHHHHHHHHHHHHHHHHHHHhcC---C--------ccEEEEeecceeeeccCC
Confidence 6899999998431 11 112345678999999999999987642 1 3579999997654311
Q ss_pred ----------------------CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChH-HHHHH
Q 022386 164 ----------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE-EIRSK 220 (298)
Q Consensus 164 ----------------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~-~~~~~ 220 (298)
++...|+.||.+.+.+++.++.++ |++++.+.|+.+..+........- .....
T Consensus 141 ~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~ 216 (338)
T PLN00198 141 SGTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEEN----NIDLITVIPTLMAGPSLTSDIPSSLSLAMS 216 (338)
T ss_pred CCCCceeccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHhc----CceEEEEeCCceECCCccCCCCCcHHHHHH
Confidence 124469999999999999887664 699999999999877532211110 01111
Q ss_pred Hhh----------hcc----CCCCCCHHHHHHHHHHhcCC
Q 022386 221 ATD----------YMA----AYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 221 ~~~----------~~~----~~~~~~~~dva~~~~~L~s~ 246 (298)
... ..+ .+.+...+|++++++.++..
T Consensus 217 ~~~~~~~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~ 256 (338)
T PLN00198 217 LITGNEFLINGLKGMQMLSGSISITHVEDVCRAHIFLAEK 256 (338)
T ss_pred HHcCCccccccccccccccCCcceeEHHHHHHHHHHHhhC
Confidence 110 001 13678999999999988865
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.4e-18 Score=151.12 Aligned_cols=246 Identities=17% Similarity=0.114 Sum_probs=160.9
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHH----hCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH----SLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~----~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
+|++|+++||||+|+||.+++++|+++|++|++++|...........+. ..+.++.++.+|++++++++++++..
T Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~- 80 (352)
T PLN02240 2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST- 80 (352)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC-
Confidence 5678999999999999999999999999999999875332222111121 12346788999999999999887752
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC--
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-- 162 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~-- 162 (298)
.+|++||+|+..... .+.+.+.+.+++|+.++.++++++.. .+ .+++|++||...+..
T Consensus 81 ----~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~--------~~~~v~~Ss~~vyg~~~ 140 (352)
T PLN02240 81 ----RFDAVIHFAGLKAVG----ESVAKPLLYYDNNLVGTINLLEVMAK----HG--------CKKLVFSSSATVYGQPE 140 (352)
T ss_pred ----CCCEEEEccccCCcc----ccccCHHHHHHHHHHHHHHHHHHHHH----cC--------CCEEEEEccHHHhCCCC
Confidence 799999999864321 12345678899999999999886542 22 256999998643311
Q ss_pred ---------CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccC------cCChH---HHHHHHhh-
Q 022386 163 ---------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS------KLAPE---EIRSKATD- 223 (298)
Q Consensus 163 ---------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~------~~~~~---~~~~~~~~- 223 (298)
..+...|+.||.+.+.+++.++.+. .++.+..+.++.+..+.... ...+. .+......
T Consensus 141 ~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 217 (352)
T PLN02240 141 EVPCTEEFPLSATNPYGRTKLFIEEICRDIHASD---PEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVG 217 (352)
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc---CCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhC
Confidence 1135689999999999999887652 25777777776554321100 00011 11111111
Q ss_pred h----------------ccCCCCCCHHHHHHHHHHhcCCC--CCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhh
Q 022386 224 Y----------------MAAYKFGEKWDIAMAALYLASDA--GKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVE 283 (298)
Q Consensus 224 ~----------------~~~~~~~~~~dva~~~~~L~s~~--~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~ 283 (298)
. ...+.+...+|++++++.++... .....|+.+++.+|..++ .+.+.+.+.+.+.
T Consensus 218 ~~~~~~~~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s-----~~el~~~i~~~~g 290 (352)
T PLN02240 218 RRPELTVFGNDYPTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTS-----VLEMVAAFEKASG 290 (352)
T ss_pred CCCceEEeCCCCCCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEe-----HHHHHHHHHHHhC
Confidence 0 11123567899999887766421 122456899998887765 3455555544443
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.7e-18 Score=148.81 Aligned_cols=224 Identities=20% Similarity=0.134 Sum_probs=154.9
Q ss_pred EEEEecCCchhHHHHHHHHHHcC--CcEEEEcCChh-HHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 14 VALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G--~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
+++||||+|+||.+++++|++.| .+|+++++... ...+..+.+.. ..++.++.+|+++++++.++++.. ++
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 74 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED-NPRYRFVKGDIGDRELVSRLFTEH-----QP 74 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc-CCCcEEEEcCCcCHHHHHHHHhhc-----CC
Confidence 48999999999999999999987 67888876421 11111122211 235788899999999999888742 59
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC--------
Q 022386 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-------- 162 (298)
Q Consensus 91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~-------- 162 (298)
|++||+|+..... ...+..+..+++|+.++..+++++...+. +.++|++||...+..
T Consensus 75 d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-----------~~~~i~~Ss~~v~g~~~~~~~~~ 139 (317)
T TIGR01181 75 DAVVHFAAESHVD----RSISGPAAFIETNVVGTYTLLEAVRKYWH-----------EFRFHHISTDEVYGDLEKGDAFT 139 (317)
T ss_pred CEEEEcccccCch----hhhhCHHHHHHHHHHHHHHHHHHHHhcCC-----------CceEEEeeccceeCCCCCCCCcC
Confidence 9999999864321 23345677899999999999988776543 235999988543221
Q ss_pred ----CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhcc---------CCC
Q 022386 163 ----TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA---------AYK 229 (298)
Q Consensus 163 ----~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~ 229 (298)
..+...|+.+|.+.+.+++.++.+. ++++..+.|+.+..+........+..........+ ...
T Consensus 140 e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 215 (317)
T TIGR01181 140 ETTPLAPSSPYSASKAASDHLVRAYHRTY----GLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRD 215 (317)
T ss_pred CCCCCCCCCchHHHHHHHHHHHHHHHHHh----CCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEe
Confidence 1123579999999999999987775 58999999999986643222111222222222111 123
Q ss_pred CCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 230 FGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 230 ~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
+...+|+++++..++... ..|+++++.++..++
T Consensus 216 ~i~v~D~a~~~~~~~~~~---~~~~~~~~~~~~~~s 248 (317)
T TIGR01181 216 WLYVEDHCRAIYLVLEKG---RVGETYNIGGGNERT 248 (317)
T ss_pred eEEHHHHHHHHHHHHcCC---CCCceEEeCCCCcee
Confidence 567899999999888542 357889987776554
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.2e-17 Score=144.15 Aligned_cols=240 Identities=15% Similarity=0.090 Sum_probs=171.1
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHH--HHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRS--AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
.+++|.||||+|.||..+++.|+++|++|+.+.|+.+.... .+..+.....+...+..|++++++++.+++
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~------- 77 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID------- 77 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh-------
Confidence 78999999999999999999999999999999999876333 355555555668899999999999999987
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC-C---
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-W--- 164 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~-~--- 164 (298)
+.|+++|.|....... .+ .-.+.++..+.|+.++++++...-. -.+||+.||.++.... +
T Consensus 78 gcdgVfH~Asp~~~~~---~~--~e~~li~pav~Gt~nVL~ac~~~~s-----------VkrvV~TSS~aAv~~~~~~~~ 141 (327)
T KOG1502|consen 78 GCDGVFHTASPVDFDL---ED--PEKELIDPAVKGTKNVLEACKKTKS-----------VKRVVYTSSTAAVRYNGPNIG 141 (327)
T ss_pred CCCEEEEeCccCCCCC---CC--cHHhhhhHHHHHHHHHHHHHhccCC-----------cceEEEeccHHHhccCCcCCC
Confidence 7999999997543221 11 2246899999999999999986541 2459999999887543 1
Q ss_pred ------------------CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCCh--HHHHHHHhh-
Q 022386 165 ------------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP--EEIRSKATD- 223 (298)
Q Consensus 165 ------------------~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~--~~~~~~~~~- 223 (298)
....|+.||..-+..+..++.|. ++....|+|+.|..|........ .-..+.+..
T Consensus 142 ~~~vvdE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~----~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~ 217 (327)
T KOG1502|consen 142 ENSVVDEESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKEN----GLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGL 217 (327)
T ss_pred CCcccccccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHhC----CccEEEecCCceECCCcccccchhHHHHHHHHhcc
Confidence 01358888877666666666663 79999999999988766553221 112222221
Q ss_pred ---hc-cCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhhhccCCCC
Q 022386 224 ---YM-AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKSRDSP 290 (298)
Q Consensus 224 ---~~-~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (298)
.. ....+.+..|+|.+.++++..+.. .|+.|.+..... +.++...+.+.++.++
T Consensus 218 ~~~~~n~~~~~VdVrDVA~AHv~a~E~~~a--~GRyic~~~~~~-----------~~ei~~~l~~~~P~~~ 275 (327)
T KOG1502|consen 218 AETYPNFWLAFVDVRDVALAHVLALEKPSA--KGRYICVGEVVS-----------IKEIADILRELFPDYP 275 (327)
T ss_pred cccCCCCceeeEeHHHHHHHHHHHHcCccc--CceEEEecCccc-----------HHHHHHHHHHhCCCCC
Confidence 11 112367899999999999976443 377776654422 4445555555555555
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.3e-18 Score=149.27 Aligned_cols=219 Identities=15% Similarity=0.090 Sum_probs=150.0
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHH--hCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH--SLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
++|++|||||+|+||.+++++|+++|++|+++.|+............ ....++.++.+|+++.++++.+++
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 75 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD------- 75 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc-------
Confidence 46899999999999999999999999999999887654332222111 112468899999999988877765
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc--ccCC---
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH--YTAT--- 163 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~--~~~~--- 163 (298)
.+|++||+|+..... ... .....+++|+.++.++++++..... -.++|++||... +.+.
T Consensus 76 ~~d~Vih~A~~~~~~---~~~--~~~~~~~~nv~gt~~ll~a~~~~~~-----------~~~~v~~SS~~~~~y~~~~~~ 139 (322)
T PLN02662 76 GCEGVFHTASPFYHD---VTD--PQAELIDPAVKGTLNVLRSCAKVPS-----------VKRVVVTSSMAAVAYNGKPLT 139 (322)
T ss_pred CCCEEEEeCCcccCC---CCC--hHHHHHHHHHHHHHHHHHHHHhCCC-----------CCEEEEccCHHHhcCCCcCCC
Confidence 589999999864211 111 2257889999999999999875321 246999999753 2111
Q ss_pred ------------CC-----chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC-ChHHHHHHHhhhc
Q 022386 164 ------------WY-----QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYM 225 (298)
Q Consensus 164 ------------~~-----~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~-~~~~~~~~~~~~~ 225 (298)
+. ...|+.+|.+.+.+++.+..+. |++++.+.|+.+.++...... .............
T Consensus 140 ~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~ 215 (322)
T PLN02662 140 PDVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKEN----GIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGA 215 (322)
T ss_pred CCCcCCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHHc----CCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCC
Confidence 10 1369999999999998876653 699999999999887533211 1111111111111
Q ss_pred -----cCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeC
Q 022386 226 -----AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVD 259 (298)
Q Consensus 226 -----~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~d 259 (298)
....+...+|+|++++.++..+. ..| .+++.
T Consensus 216 ~~~~~~~~~~i~v~Dva~a~~~~~~~~~--~~~-~~~~~ 251 (322)
T PLN02662 216 QTFPNASYRWVDVRDVANAHIQAFEIPS--ASG-RYCLV 251 (322)
T ss_pred ccCCCCCcCeEEHHHHHHHHHHHhcCcC--cCC-cEEEe
Confidence 12457899999999998886432 235 45554
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.9e-17 Score=148.37 Aligned_cols=228 Identities=18% Similarity=0.105 Sum_probs=146.8
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhH-----HHHHHHHHH-hCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-----LRSAVAALH-SLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~-----~~~~~~~~~-~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
|++|||||+|+||.+++++|+++|++|++++|+.+. ++.+.+... ..+.++.++.+|++|.+++.++++..
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~--- 77 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI--- 77 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence 689999999999999999999999999999987532 111111111 11345889999999999999988853
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC----
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA---- 162 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~---- 162 (298)
++|++||+|+...... ..+.-...+++|+.++.++++++.+.-.+. ..++|++||...+..
T Consensus 78 --~~d~ViH~Aa~~~~~~----~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~---------~~~~v~~SS~~vyg~~~~~ 142 (343)
T TIGR01472 78 --KPTEIYNLAAQSHVKV----SFEIPEYTADVDGIGTLRLLEAVRTLGLIK---------SVKFYQASTSELYGKVQEI 142 (343)
T ss_pred --CCCEEEECCcccccch----hhhChHHHHHHHHHHHHHHHHHHHHhCCCc---------CeeEEEeccHHhhCCCCCC
Confidence 5899999999643221 112235677899999999999988642211 135899988644321
Q ss_pred -------CCCchhhHHHHHHHHHHHHHHHHHhcCC--CCeEEEEEeCCcccCCcccCcCChHHHHHHHhh----------
Q 022386 163 -------TWYQIHVSAAKAAVDSITRSLALEWGTD--YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD---------- 223 (298)
Q Consensus 163 -------~~~~~~Y~~sK~a~~~l~~~la~e~~~~--~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~---------- 223 (298)
..+...|+.||.+.+.+++.++.+++.+ .++..+...|+.-. ...... -......+..
T Consensus 143 ~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~g~ 219 (343)
T TIGR01472 143 PQNETTPFYPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGE--NFVTRK-ITRAAAKIKLGLQEKLYLGN 219 (343)
T ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCc--cccchH-HHHHHHHHHcCCCCceeeCC
Confidence 1235689999999999999998876311 01122233333111 000000 0111111111
Q ss_pred hccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 224 YMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 224 ~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
....+.+...+|++++++.++.... +..+++.+|..++
T Consensus 220 g~~~rd~i~V~D~a~a~~~~~~~~~----~~~yni~~g~~~s 257 (343)
T TIGR01472 220 LDAKRDWGHAKDYVEAMWLMLQQDK----PDDYVIATGETHS 257 (343)
T ss_pred CccccCceeHHHHHHHHHHHHhcCC----CccEEecCCCcee
Confidence 1223467799999999988875431 3468888776654
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.7e-17 Score=147.63 Aligned_cols=232 Identities=14% Similarity=0.025 Sum_probs=158.8
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHh-----CCCCeEEEEccCCCHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-----LGIPAIGLEGDVRKREDAVRVVE 81 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dls~~~~~~~~~~ 81 (298)
..-+++|+++||||+|.||.+++++|+++|++|++++|...........+.. ...++.++.+|++|.+.+..+++
T Consensus 10 ~~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~ 89 (348)
T PRK15181 10 KLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK 89 (348)
T ss_pred cccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh
Confidence 3567889999999999999999999999999999998865432222222211 11357889999999888777765
Q ss_pred HHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc
Q 022386 82 STINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 161 (298)
Q Consensus 82 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~ 161 (298)
.+|++||.|+...... ..++....+++|+.++.++++++... + -.++|++||...+.
T Consensus 90 -------~~d~ViHlAa~~~~~~----~~~~~~~~~~~Nv~gt~nll~~~~~~----~--------~~~~v~~SS~~vyg 146 (348)
T PRK15181 90 -------NVDYVLHQAALGSVPR----SLKDPIATNSANIDGFLNMLTAARDA----H--------VSSFTYAASSSTYG 146 (348)
T ss_pred -------CCCEEEECccccCchh----hhhCHHHHHHHHHHHHHHHHHHHHHc----C--------CCeEEEeechHhhC
Confidence 5899999998643211 11233457999999999999987542 1 24699999875432
Q ss_pred CC-----------CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc----CChHHHHHHHhhhc-
Q 022386 162 AT-----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK----LAPEEIRSKATDYM- 225 (298)
Q Consensus 162 ~~-----------~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~----~~~~~~~~~~~~~~- 225 (298)
.. .+...|+.||.+.+.+++.++.+. |+++..+.|+.+..+..... ..-+.+...+....
T Consensus 147 ~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~ 222 (348)
T PRK15181 147 DHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSY----EFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEP 222 (348)
T ss_pred CCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHh----CCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCC
Confidence 11 123579999999999998876553 69999999999987643211 11122222222111
Q ss_pred --------cCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 226 --------AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 226 --------~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
..+.+...+|+++++..++........|+++++.+|..++
T Consensus 223 i~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~yni~~g~~~s 270 (348)
T PRK15181 223 IYINGDGSTSRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDRTS 270 (348)
T ss_pred cEEeCCCCceEeeEEHHHHHHHHHHHHhcccccCCCCEEEecCCCcEe
Confidence 1234568899999988766432222357899998886654
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.79 E-value=2e-17 Score=149.45 Aligned_cols=242 Identities=11% Similarity=0.055 Sum_probs=156.5
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC------CCCeEEEEccCCCHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL------GIPAIGLEGDVRKREDAVRVV 80 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dls~~~~~~~~~ 80 (298)
..+.++|++|||||+|+||.+++++|+++|++|+++.|+.+..+.+ ..+... ...+.++.+|++|.+++.+++
T Consensus 48 ~~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i 126 (367)
T PLN02686 48 GADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAF 126 (367)
T ss_pred ccCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHH
Confidence 4567899999999999999999999999999999988876554443 222211 124788999999999998887
Q ss_pred HHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc-
Q 022386 81 ESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH- 159 (298)
Q Consensus 81 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~- 159 (298)
+ .+|+++|.++......... ......++|+.++.++++++...- + -.++|++||..+
T Consensus 127 ~-------~~d~V~hlA~~~~~~~~~~----~~~~~~~~nv~gt~~llea~~~~~---~--------v~r~V~~SS~~~~ 184 (367)
T PLN02686 127 D-------GCAGVFHTSAFVDPAGLSG----YTKSMAELEAKASENVIEACVRTE---S--------VRKCVFTSSLLAC 184 (367)
T ss_pred H-------hccEEEecCeeeccccccc----ccchhhhhhHHHHHHHHHHHHhcC---C--------ccEEEEeccHHHh
Confidence 6 4788999988643221111 112346789999999998876431 1 235999988531
Q ss_pred cc------C--C--------------CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHH
Q 022386 160 YT------A--T--------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI 217 (298)
Q Consensus 160 ~~------~--~--------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~ 217 (298)
.. . . .+...|+.||.+.+.+++.++.+. |++++.+.|+.+.++....... ...
T Consensus 185 vyg~~~~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----gl~~v~lRp~~vyGp~~~~~~~-~~~ 259 (367)
T PLN02686 185 VWRQNYPHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARGK----GLKLATICPALVTGPGFFRRNS-TAT 259 (367)
T ss_pred cccccCCCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHhc----CceEEEEcCCceECCCCCCCCC-hhH
Confidence 10 0 0 012469999999999999887663 7999999999999875322111 111
Q ss_pred HHHHhhhcc-----CCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhh
Q 022386 218 RSKATDYMA-----AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAV 282 (298)
Q Consensus 218 ~~~~~~~~~-----~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~ 282 (298)
........+ ...+...+|++++++.++........|..+ +-.|..++ .+.+.+.+.+.+
T Consensus 260 ~~~~~g~~~~~g~g~~~~v~V~Dva~A~~~al~~~~~~~~~~~y-i~~g~~~s-----~~e~~~~i~~~~ 323 (367)
T PLN02686 260 IAYLKGAQEMLADGLLATADVERLAEAHVCVYEAMGNKTAFGRY-ICFDHVVS-----REDEAEELARQI 323 (367)
T ss_pred HHHhcCCCccCCCCCcCeEEHHHHHHHHHHHHhccCCCCCCCcE-EEeCCCcc-----HHHHHHHHHHHc
Confidence 111111111 123678999999998887532111234455 43444443 244444444444
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.9e-17 Score=145.67 Aligned_cols=231 Identities=17% Similarity=0.114 Sum_probs=154.1
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCc-EEEEcCChh--HHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKT--VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~-Vv~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
+++||||+|+||.+++++|+++|.. |+.+++... ..+... .+. .+.++.++.+|++|.++++++++. .++
T Consensus 2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~ 74 (352)
T PRK10084 2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA-DVS-DSERYVFEHADICDRAELDRIFAQ-----HQP 74 (352)
T ss_pred eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHH-hcc-cCCceEEEEecCCCHHHHHHHHHh-----cCC
Confidence 6999999999999999999999986 555555321 112111 111 134577889999999999998875 379
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC--------
Q 022386 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-------- 162 (298)
Q Consensus 91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~-------- 162 (298)
|++||+|+...... .....++.+++|+.++.++++++.++|.+.... .....++|++||...+..
T Consensus 75 d~vih~A~~~~~~~----~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~---~~~~~~~i~~SS~~vyg~~~~~~~~~ 147 (352)
T PRK10084 75 DAVMHLAAESHVDR----SITGPAAFIETNIVGTYVLLEAARNYWSALDED---KKNAFRFHHISTDEVYGDLPHPDEVE 147 (352)
T ss_pred CEEEECCcccCCcc----hhcCchhhhhhhhHHHHHHHHHHHHhccccccc---cccceeEEEecchhhcCCCCcccccc
Confidence 99999998643211 122346789999999999999999876432100 001247999988643321
Q ss_pred -------------CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhh--cc-
Q 022386 163 -------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY--MA- 226 (298)
Q Consensus 163 -------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~--~~- 226 (298)
..+...|+.||.+.+.+++.++.++ |+++..+.|+.+..+.......-.......... .+
T Consensus 148 ~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~ 223 (352)
T PRK10084 148 NSEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY----GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPI 223 (352)
T ss_pred ccccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh----CCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEE
Confidence 1234689999999999999988775 467777888888766422111112222222211 11
Q ss_pred ------CCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 227 ------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 227 ------~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
.+.+...+|+++++..++... ..|+.+++.++...+
T Consensus 224 ~~~g~~~~~~v~v~D~a~a~~~~l~~~---~~~~~yni~~~~~~s 265 (352)
T PRK10084 224 YGKGDQIRDWLYVEDHARALYKVVTEG---KAGETYNIGGHNEKK 265 (352)
T ss_pred eCCCCeEEeeEEHHHHHHHHHHHHhcC---CCCceEEeCCCCcCc
Confidence 234678999999998887542 247889998776543
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=9e-17 Score=143.63 Aligned_cols=228 Identities=16% Similarity=0.106 Sum_probs=151.1
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC-CCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
+++||||+|+||++++++|+++|++|++++|...........+.+. +.++.++.+|++|.+++..+++. .++|+
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~ 76 (338)
T PRK10675 2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD-----HAIDT 76 (338)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc-----CCCCE
Confidence 6999999999999999999999999999876533323322333332 34577889999999998888763 37999
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC---------
Q 022386 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--------- 163 (298)
Q Consensus 93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~--------- 163 (298)
+||+|+...... ..+...+.+++|+.++.++++++. +.+ .+++|++||...+...
T Consensus 77 vvh~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~--------~~~~v~~Ss~~~yg~~~~~~~~E~~ 140 (338)
T PRK10675 77 VIHFAGLKAVGE----SVQKPLEYYDNNVNGTLRLISAMR----AAN--------VKNLIFSSSATVYGDQPKIPYVESF 140 (338)
T ss_pred EEECCccccccc----hhhCHHHHHHHHHHHHHHHHHHHH----HcC--------CCEEEEeccHHhhCCCCCCcccccc
Confidence 999998643221 123345678999999999987654 222 3569999986543110
Q ss_pred ---CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc------CChHHH---HHHHh-hh------
Q 022386 164 ---WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK------LAPEEI---RSKAT-DY------ 224 (298)
Q Consensus 164 ---~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~------~~~~~~---~~~~~-~~------ 224 (298)
.+...|+.+|.+.+.+++.++++.. ++++..+.|+.+..+..... ..+..+ ..... ..
T Consensus 141 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~---~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (338)
T PRK10675 141 PTGTPQSPYGKSKLMVEQILTDLQKAQP---DWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAI 217 (338)
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhcC---CCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEE
Confidence 2356899999999999999876642 57777777666654311000 001111 11111 11
Q ss_pred ----------ccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 225 ----------MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 225 ----------~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
...+.+...+|++++++.++........|+++++.+|..++
T Consensus 218 ~~~~~~~~~g~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s 268 (338)
T PRK10675 218 FGNDYPTEDGTGVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSS 268 (338)
T ss_pred eCCcCCCCCCcEEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCcee
Confidence 01134678999999988877532122336789998886654
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.5e-16 Score=141.34 Aligned_cols=214 Identities=18% Similarity=0.159 Sum_probs=149.2
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
++++||||+|+||.++++.|+++|++|++++|+.+.... +. ...+.++.+|+++.++++++++ .+|+
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~--~~~~~~~~~D~~~~~~l~~~~~-------~~d~ 67 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRN----LE--GLDVEIVEGDLRDPASLRKAVA-------GCRA 67 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccc----cc--cCCceEEEeeCCCHHHHHHHHh-------CCCE
Confidence 479999999999999999999999999999998653221 11 2247889999999998888765 6899
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC--------
Q 022386 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-------- 164 (298)
Q Consensus 93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~-------- 164 (298)
+||+|+... .. .+..+..+++|+.++..+++++... + .+++|++||...+...+
T Consensus 68 vi~~a~~~~---~~---~~~~~~~~~~n~~~~~~l~~~~~~~----~--------~~~~v~~SS~~~~~~~~~~~~~~e~ 129 (328)
T TIGR03466 68 LFHVAADYR---LW---APDPEEMYAANVEGTRNLLRAALEA----G--------VERVVYTSSVATLGVRGDGTPADET 129 (328)
T ss_pred EEEeceecc---cC---CCCHHHHHHHHHHHHHHHHHHHHHh----C--------CCeEEEEechhhcCcCCCCCCcCcc
Confidence 999997532 11 1235678899999999999887642 1 35699999976543211
Q ss_pred -------CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHH-Hhhhcc-----CCCCC
Q 022386 165 -------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK-ATDYMA-----AYKFG 231 (298)
Q Consensus 165 -------~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~-~~~~~~-----~~~~~ 231 (298)
....|+.+|.+.+.+++.++.+. ++++..+.|+.+..+.............. .....+ ...+.
T Consensus 130 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 205 (328)
T TIGR03466 130 TPSSLDDMIGHYKRSKFLAEQAALEMAAEK----GLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLV 205 (328)
T ss_pred CCCCcccccChHHHHHHHHHHHHHHHHHhc----CCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceE
Confidence 12479999999999999886653 68999999999876543222111112111 111111 12356
Q ss_pred CHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 232 EKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 232 ~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
..+|+++++..++... ..|+.+++. |..++
T Consensus 206 ~v~D~a~a~~~~~~~~---~~~~~~~~~-~~~~s 235 (328)
T TIGR03466 206 HVDDVAEGHLLALERG---RIGERYILG-GENLT 235 (328)
T ss_pred EHHHHHHHHHHHHhCC---CCCceEEec-CCCcC
Confidence 8999999998887542 357777774 44443
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.6e-16 Score=139.66 Aligned_cols=240 Identities=17% Similarity=0.068 Sum_probs=158.7
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l 93 (298)
+++||||+|+||.+++++|+++|++|+++++......+....+... .++.++.+|+++.++++++++. +++|++
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~-----~~~d~v 74 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERI-TRVTFVEGDLRDRELLDRLFEE-----HKIDAV 74 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccc-cceEEEECCCCCHHHHHHHHHh-----CCCcEE
Confidence 4799999999999999999999999998876543222222222221 2577889999999999988763 479999
Q ss_pred EECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC----------
Q 022386 94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT---------- 163 (298)
Q Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~---------- 163 (298)
||+||...... ..+...+.++.|+.++..+++++.. .+ .+++|++||...+...
T Consensus 75 v~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~--------~~~~v~~ss~~~~g~~~~~~~~e~~~ 138 (328)
T TIGR01179 75 IHFAGLIAVGE----SVQDPLKYYRNNVVNTLNLLEAMQQ----TG--------VKKFIFSSSAAVYGEPSSIPISEDSP 138 (328)
T ss_pred EECccccCcch----hhcCchhhhhhhHHHHHHHHHHHHh----cC--------CCEEEEecchhhcCCCCCCCccccCC
Confidence 99999643221 2234456789999999999887543 22 3569998886543211
Q ss_pred -CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc-----CChHHHHH----HHhhh---------
Q 022386 164 -WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK-----LAPEEIRS----KATDY--------- 224 (298)
Q Consensus 164 -~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~-----~~~~~~~~----~~~~~--------- 224 (298)
.+...|+.+|.+++.+++.++.+. .++++..+.|+.+..+..... ........ .....
T Consensus 139 ~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (328)
T TIGR01179 139 LGPINPYGRSKLMSERILRDLSKAD---PGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGT 215 (328)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHhc---cCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCC
Confidence 123579999999999999997763 269999999988876532110 01111111 11100
Q ss_pred -cc------CCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhh
Q 022386 225 -MA------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVE 283 (298)
Q Consensus 225 -~~------~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~ 283 (298)
.+ ...+...+|+++++..++........|+.+++.++..++ .+.+.+.+.+.+.
T Consensus 216 ~~~~~~g~~~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s-----~~ei~~~~~~~~g 276 (328)
T TIGR01179 216 DYPTPDGTCVRDYIHVMDLADAHLAALEYLLNGGESHVYNLGYGQGFS-----VLEVIEAFKKVSG 276 (328)
T ss_pred cccCCCCceEEeeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCccc-----HHHHHHHHHHHhC
Confidence 01 123567899999999888542222346788887776654 3444555544443
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.2e-16 Score=134.09 Aligned_cols=241 Identities=20% Similarity=0.123 Sum_probs=169.7
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCc--EEEEcCCh--hHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAA--IAIMGRRK--TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~--Vv~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
+++|||||.|+||.+++++++++... |+.++.-. ...+.+ +.+. ..+++.|++.|+.|.+.+.+++++-
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l-~~~~-~~~~~~fv~~DI~D~~~v~~~~~~~----- 73 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENL-ADVE-DSPRYRFVQGDICDRELVDRLFKEY----- 73 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHH-Hhhh-cCCCceEEeccccCHHHHHHHHHhc-----
Confidence 47899999999999999999988653 66666532 112222 2222 2357999999999999999998853
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc---------
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH--------- 159 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~--------- 159 (298)
.+|+++|.|+-.... .+.++-...+++|+.|++.|++++..+..+ -+++.||.---
T Consensus 74 ~~D~VvhfAAESHVD----RSI~~P~~Fi~TNv~GT~~LLEaar~~~~~-----------frf~HISTDEVYG~l~~~~~ 138 (340)
T COG1088 74 QPDAVVHFAAESHVD----RSIDGPAPFIQTNVVGTYTLLEAARKYWGK-----------FRFHHISTDEVYGDLGLDDD 138 (340)
T ss_pred CCCeEEEechhcccc----ccccChhhhhhcchHHHHHHHHHHHHhccc-----------ceEEEeccccccccccCCCC
Confidence 799999999865432 233444667899999999999999988753 23777765321
Q ss_pred ----ccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhh---------hcc
Q 022386 160 ----YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD---------YMA 226 (298)
Q Consensus 160 ----~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~---------~~~ 226 (298)
..+..+.+.|++||++.+.|++++.+.+ |+.+....+..-..|-+.....-+-....... ...
T Consensus 139 ~FtE~tp~~PsSPYSASKAasD~lVray~~TY----glp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~ 214 (340)
T COG1088 139 AFTETTPYNPSSPYSASKAASDLLVRAYVRTY----GLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQ 214 (340)
T ss_pred CcccCCCCCCCCCcchhhhhHHHHHHHHHHHc----CCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcc
Confidence 1334567899999999999999998876 58888888776666644433222222222222 223
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhhhccC
Q 022386 227 AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKSR 287 (298)
Q Consensus 227 ~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (298)
.+.+...+|=++++...+.. +.+ |++++|.||.... ...+++.+-+.+.+..+
T Consensus 215 iRDWl~VeDh~~ai~~Vl~k--g~~-GE~YNIgg~~E~~-----Nlevv~~i~~~l~~~~~ 267 (340)
T COG1088 215 IRDWLYVEDHCRAIDLVLTK--GKI-GETYNIGGGNERT-----NLEVVKTICELLGKDKP 267 (340)
T ss_pred eeeeEEeHhHHHHHHHHHhc--CcC-CceEEeCCCccch-----HHHHHHHHHHHhCcccc
Confidence 35677888999999888864 334 9999999997775 35566666666555443
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.8e-16 Score=140.00 Aligned_cols=220 Identities=16% Similarity=0.108 Sum_probs=147.6
Q ss_pred EEEEecCCchhHHHHHHHHHHcC--CcEEEEcCChhH---HHHHHHHHHhCC--------CCeEEEEccCCCHH------
Q 022386 14 VALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTV---LRSAVAALHSLG--------IPAIGLEGDVRKRE------ 74 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G--~~Vv~~~r~~~~---~~~~~~~~~~~~--------~~~~~~~~Dls~~~------ 74 (298)
+++||||||+||.++++.|+++| ++|+++.|+.+. .+++.+.+.... .++.++.+|++++.
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 58999999999999999999999 679999987552 223333332211 46889999998652
Q ss_pred HHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEe
Q 022386 75 DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI 154 (298)
Q Consensus 75 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~v 154 (298)
....+. ..+|++||||+..... ..++..+++|+.++..+++.+... + ..+++++
T Consensus 81 ~~~~~~-------~~~d~vih~a~~~~~~-------~~~~~~~~~nv~g~~~ll~~a~~~----~--------~~~~v~i 134 (367)
T TIGR01746 81 EWERLA-------ENVDTIVHNGALVNWV-------YPYSELRAANVLGTREVLRLAASG----R--------AKPLHYV 134 (367)
T ss_pred HHHHHH-------hhCCEEEeCCcEeccC-------CcHHHHhhhhhHHHHHHHHHHhhC----C--------CceEEEE
Confidence 222222 4799999999854311 234667789999999998877542 1 2349999
Q ss_pred cccccccCC----------------CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHH
Q 022386 155 SATLHYTAT----------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR 218 (298)
Q Consensus 155 ss~~~~~~~----------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~ 218 (298)
||...+... .....|+.+|.+.+.+++.+.. .|++++.+.||.+.++.........+..
T Consensus 135 SS~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-----~g~~~~i~Rpg~v~G~~~~g~~~~~~~~ 209 (367)
T TIGR01746 135 STISVLAAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD-----RGLPVTIVRPGRILGNSYTGAINSSDIL 209 (367)
T ss_pred ccccccCCcCCCCccccccccccccccCCChHHHHHHHHHHHHHHHh-----cCCCEEEECCCceeecCCCCCCCchhHH
Confidence 998665331 0124699999999998876532 2799999999999865322222222222
Q ss_pred HHHh------hhcc-----CCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCC
Q 022386 219 SKAT------DYMA-----AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 219 ~~~~------~~~~-----~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
.... ...+ ...+.+.+|++++++.++.......+|+.+++.++..+
T Consensus 210 ~~~~~~~~~~~~~p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~ 266 (367)
T TIGR01746 210 WRMVKGCLALGAYPDSPELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPV 266 (367)
T ss_pred HHHHHHHHHhCCCCCCCccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCCC
Confidence 1111 1111 12367889999999999866443345888999886544
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.74 E-value=1e-15 Score=139.19 Aligned_cols=240 Identities=21% Similarity=0.218 Sum_probs=184.1
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhC--CCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
..+.||++|||||+|.||.++|+++++.+. .+++++|++-++.....+++.. ..++.++-+|+.|.+.++++++..
T Consensus 246 ~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~- 324 (588)
T COG1086 246 AMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH- 324 (588)
T ss_pred hHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC-
Confidence 368899999999999999999999999988 5888999998888888888875 356888999999999999999853
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~ 164 (298)
++|+++|.|+.-. -|+-+.. ..+-+.+|++|+.++.+++...-.+ ++|.+|+--+..|
T Consensus 325 ----kvd~VfHAAA~KH-VPl~E~n---P~Eai~tNV~GT~nv~~aa~~~~V~------------~~V~iSTDKAV~P-- 382 (588)
T COG1086 325 ----KVDIVFHAAALKH-VPLVEYN---PEEAIKTNVLGTENVAEAAIKNGVK------------KFVLISTDKAVNP-- 382 (588)
T ss_pred ----CCceEEEhhhhcc-CcchhcC---HHHHHHHhhHhHHHHHHHHHHhCCC------------EEEEEecCcccCC--
Confidence 6999999998532 2333333 3567899999999999999876553 4999999777655
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccC--------CCCCCHHHH
Q 022386 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA--------YKFGEKWDI 236 (298)
Q Consensus 165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~dv 236 (298)
...|+++|...+.++++++.+.. ..+-+..++.=|.|-...+ .--+-+.+++.+.-|. +.|.+-.|.
T Consensus 383 -tNvmGaTKr~aE~~~~a~~~~~~-~~~T~f~~VRFGNVlGSrG---SViPlFk~QI~~GgplTvTdp~mtRyfMTI~EA 457 (588)
T COG1086 383 -TNVMGATKRLAEKLFQAANRNVS-GTGTRFCVVRFGNVLGSRG---SVIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEA 457 (588)
T ss_pred -chHhhHHHHHHHHHHHHHhhccC-CCCcEEEEEEecceecCCC---CCHHHHHHHHHcCCCccccCCCceeEEEEHHHH
Confidence 46799999999999999988764 3368899999999975421 1224444455444332 456678899
Q ss_pred HHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhh
Q 022386 237 AMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVE 283 (298)
Q Consensus 237 a~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~ 283 (298)
++.++...... -.|+++..|-|..+.. ..+.+.|.+.+.
T Consensus 458 v~LVlqA~a~~---~gGeifvldMGepvkI-----~dLAk~mi~l~g 496 (588)
T COG1086 458 VQLVLQAGAIA---KGGEIFVLDMGEPVKI-----IDLAKAMIELAG 496 (588)
T ss_pred HHHHHHHHhhc---CCCcEEEEcCCCCeEH-----HHHHHHHHHHhC
Confidence 99888777543 4599999999988763 344455544443
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.1e-16 Score=145.82 Aligned_cols=232 Identities=12% Similarity=0.041 Sum_probs=153.7
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHc-CCcEEEEcCChhHHHHHHHHHH-hCCCCeEEEEccCCCHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALH-SLGIPAIGLEGDVRKREDAVRVVES 82 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~-G~~Vv~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dls~~~~~~~~~~~ 82 (298)
+....++.++++||||+|.||.+++++|+++ |++|++++|+.+.......... ....++.++.+|++|.+.++++++
T Consensus 7 ~~~~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~- 85 (386)
T PLN02427 7 LDGKPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK- 85 (386)
T ss_pred CCCCcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh-
Confidence 4455677789999999999999999999998 5899999887654333221110 112468899999999988887765
Q ss_pred HHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC
Q 022386 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (298)
Q Consensus 83 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~ 162 (298)
.+|++||+|+........ .. -.+.+..|+.++.++++++... +.++|++||...+..
T Consensus 86 ------~~d~ViHlAa~~~~~~~~-~~---~~~~~~~n~~gt~~ll~aa~~~-------------~~r~v~~SS~~vYg~ 142 (386)
T PLN02427 86 ------MADLTINLAAICTPADYN-TR---PLDTIYSNFIDALPVVKYCSEN-------------NKRLIHFSTCEVYGK 142 (386)
T ss_pred ------cCCEEEEcccccChhhhh-hC---hHHHHHHHHHHHHHHHHHHHhc-------------CCEEEEEeeeeeeCC
Confidence 489999999864322111 11 1244668999999998877532 135999998643311
Q ss_pred C---------C------------------------CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCccc
Q 022386 163 T---------W------------------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV 209 (298)
Q Consensus 163 ~---------~------------------------~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~ 209 (298)
. + ....|+.||.+.+.+++.++.. +|+++..+.|+.+..+...
T Consensus 143 ~~~~~~~e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~g~~~~ilR~~~vyGp~~~ 218 (386)
T PLN02427 143 TIGSFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE----NGLEFTIVRPFNWIGPRMD 218 (386)
T ss_pred CcCCCCCcccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh----cCCceEEecccceeCCCCC
Confidence 0 0 1136999999999999877544 3799999999999876432
Q ss_pred Cc-------CChHHHH----HHHhhhcc---------CCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCC-CCCC
Q 022386 210 SK-------LAPEEIR----SKATDYMA---------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG-NWLS 265 (298)
Q Consensus 210 ~~-------~~~~~~~----~~~~~~~~---------~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG-~~~~ 265 (298)
.. ....... ..+....+ .+.+...+|++++++.++... ....|+.+++.+| ..++
T Consensus 219 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~-~~~~g~~yni~~~~~~~s 294 (386)
T PLN02427 219 FIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENP-ARANGHIFNVGNPNNEVT 294 (386)
T ss_pred ccccccccccccchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCc-ccccCceEEeCCCCCCcc
Confidence 10 0001111 11111111 124778999999999888542 1235788999776 3444
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.1e-15 Score=130.99 Aligned_cols=202 Identities=14% Similarity=0.063 Sum_probs=132.1
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCH-HHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR-EDAVRVVESTIN 85 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~-~~~~~~~~~~~~ 85 (298)
..+.++++++||||+|+||+++++.|+++|++|+++.|+.+...... . .+..+.++.+|+++. +++..
T Consensus 12 ~~~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~-~~~~~~~~~~Dl~d~~~~l~~------- 80 (251)
T PLN00141 12 AENVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSL---P-QDPSLQIVRADVTEGSDKLVE------- 80 (251)
T ss_pred cccccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhc---c-cCCceEEEEeeCCCCHHHHHH-------
Confidence 34667899999999999999999999999999999999876543321 1 134588899999983 32222
Q ss_pred Hh-CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc---
Q 022386 86 HF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT--- 161 (298)
Q Consensus 86 ~~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~--- 161 (298)
.+ .++|++|+++|...... . ...+++|+.++.++++++. +.+ .++||++||...+.
T Consensus 81 ~~~~~~d~vi~~~g~~~~~~--~------~~~~~~n~~~~~~ll~a~~----~~~--------~~~iV~iSS~~v~g~~~ 140 (251)
T PLN00141 81 AIGDDSDAVICATGFRRSFD--P------FAPWKVDNFGTVNLVEACR----KAG--------VTRFILVSSILVNGAAM 140 (251)
T ss_pred HhhcCCCEEEECCCCCcCCC--C------CCceeeehHHHHHHHHHHH----HcC--------CCEEEEEccccccCCCc
Confidence 22 37999999998632111 0 1124688888888888864 222 46899999986432
Q ss_pred CCCCchhhHHHHHHHHHHH-HHHHHH-hcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHH
Q 022386 162 ATWYQIHVSAAKAAVDSIT-RSLALE-WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239 (298)
Q Consensus 162 ~~~~~~~Y~~sK~a~~~l~-~~la~e-~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (298)
+.+....|...|.+...+. +..+.+ +. ..|++++.|.||++.++........ .........+.+++|+|+.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~k~~~e~~l~-~~gi~~~iirpg~~~~~~~~~~~~~------~~~~~~~~~~i~~~dvA~~ 213 (251)
T PLN00141 141 GQILNPAYIFLNLFGLTLVAKLQAEKYIR-KSGINYTIVRPGGLTNDPPTGNIVM------EPEDTLYEGSISRDQVAEV 213 (251)
T ss_pred ccccCcchhHHHHHHHHHHHHHHHHHHHH-hcCCcEEEEECCCccCCCCCceEEE------CCCCccccCcccHHHHHHH
Confidence 2223345666665444332 333332 33 5689999999999976532211100 0000112346799999999
Q ss_pred HHHhcCC
Q 022386 240 ALYLASD 246 (298)
Q Consensus 240 ~~~L~s~ 246 (298)
+..++..
T Consensus 214 ~~~~~~~ 220 (251)
T PLN00141 214 AVEALLC 220 (251)
T ss_pred HHHHhcC
Confidence 9999865
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.8e-16 Score=135.66 Aligned_cols=239 Identities=16% Similarity=0.108 Sum_probs=161.5
Q ss_pred EEecCCchhHHHHHHHHHHcC--CcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 022386 16 LLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (298)
Q Consensus 16 lVtG~t~giG~~ia~~l~~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l 93 (298)
|||||+|.||.+++++|+++| .+|.++++...... ...+... ....++.+|++|.+++.++++ ..|++
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~--~~~~~~~-~~~~~~~~Di~d~~~l~~a~~-------g~d~V 70 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF--LKDLQKS-GVKEYIQGDITDPESLEEALE-------GVDVV 70 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccccc--chhhhcc-cceeEEEeccccHHHHHHHhc-------CCceE
Confidence 699999999999999999999 68888887754211 1122221 223489999999999999887 78999
Q ss_pred EECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC---C-------
Q 022386 94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA---T------- 163 (298)
Q Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~---~------- 163 (298)
||.|+...... ....++.+++|+.|+-++++++... + -.++|++||...... .
T Consensus 71 ~H~Aa~~~~~~-----~~~~~~~~~vNV~GT~nvl~aa~~~----~--------VkrlVytSS~~vv~~~~~~~~~~~~d 133 (280)
T PF01073_consen 71 FHTAAPVPPWG-----DYPPEEYYKVNVDGTRNVLEAARKA----G--------VKRLVYTSSISVVFDNYKGDPIINGD 133 (280)
T ss_pred EEeCccccccC-----cccHHHHHHHHHHHHHHHHHHHHHc----C--------CCEEEEEcCcceeEeccCCCCcccCC
Confidence 99998644322 2345778999999999999988753 1 356999999876543 0
Q ss_pred -------CCchhhHHHHHHHHHHHHHHHH-HhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhh---------cc
Q 022386 164 -------WYQIHVSAAKAAVDSITRSLAL-EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY---------MA 226 (298)
Q Consensus 164 -------~~~~~Y~~sK~a~~~l~~~la~-e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~---------~~ 226 (298)
.....|+.||+..+.++..... ++....+++..+|.|..|..+...... +...+..... ..
T Consensus 134 E~~~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~--~~~~~~~~~g~~~~~~g~~~~ 211 (280)
T PF01073_consen 134 EDTPYPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLV--PRLVKMVRSGLFLFQIGDGNN 211 (280)
T ss_pred cCCcccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCccccccc--chhhHHHHhcccceeecCCCc
Confidence 1234799999999999987754 221123599999999999876432221 1112211111 11
Q ss_pred CCCCCCHHHHHHHHHHhcC---CC--CCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhhhccC
Q 022386 227 AYKFGEKWDIAMAALYLAS---DA--GKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKSR 287 (298)
Q Consensus 227 ~~~~~~~~dva~~~~~L~s---~~--~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (298)
...+...+++|.+.+..+. +. .....|+.+.+..+..+.. ...++..+++.+..+.+
T Consensus 212 ~~~~vyV~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~~~----~~~f~~~~~~~~G~~~~ 273 (280)
T PF01073_consen 212 LFDFVYVENVAHAHVLAAQALLEPGKPERVAGQAYFITDGEPVPS----FWDFMRPLWEALGYPPP 273 (280)
T ss_pred eECcEeHHHHHHHHHHHHHHhccccccccCCCcEEEEECCCccCc----HHHHHHHHHHHCCCCCC
Confidence 2236678999998865432 22 4568899999988854431 24445555555554433
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.70 E-value=6.7e-15 Score=133.13 Aligned_cols=219 Identities=17% Similarity=0.076 Sum_probs=148.7
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
++|+++||||+|.||.++++.|.++|++|++++|..... +......+.++.+|+++.+.+..+++ ++
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~------~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 86 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH------MSEDMFCHEFHLVDLRVMENCLKVTK-------GV 86 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc------cccccccceEEECCCCCHHHHHHHHh-------CC
Confidence 578999999999999999999999999999999864311 11111124678899999887766653 68
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc---------
Q 022386 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT--------- 161 (298)
Q Consensus 91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~--------- 161 (298)
|++||.|+........... ....+..|+.++.++++++... + ..++|++||...+.
T Consensus 87 D~Vih~Aa~~~~~~~~~~~---~~~~~~~N~~~t~nll~aa~~~----~--------vk~~V~~SS~~vYg~~~~~~~~~ 151 (370)
T PLN02695 87 DHVFNLAADMGGMGFIQSN---HSVIMYNNTMISFNMLEAARIN----G--------VKRFFYASSACIYPEFKQLETNV 151 (370)
T ss_pred CEEEEcccccCCccccccC---chhhHHHHHHHHHHHHHHHHHh----C--------CCEEEEeCchhhcCCccccCcCC
Confidence 9999999854322111111 2345678999999999887532 1 24699999864321
Q ss_pred --------CCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc----CChHHHHHHHhh---hc-
Q 022386 162 --------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK----LAPEEIRSKATD---YM- 225 (298)
Q Consensus 162 --------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~----~~~~~~~~~~~~---~~- 225 (298)
+..+...|+.+|.+.+.+++.++..+ |+++..+.|+.+..+..... .....+...... ..
T Consensus 152 ~~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~~----g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (370)
T PLN02695 152 SLKESDAWPAEPQDAYGLEKLATEELCKHYTKDF----GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFE 227 (370)
T ss_pred CcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh----CCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeE
Confidence 11234589999999999999886654 69999999999987643211 112233332221 11
Q ss_pred ------cCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 226 ------AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 226 ------~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
..+.+...+|+++++..++... .+..+++-+|..++
T Consensus 228 ~~g~g~~~r~~i~v~D~a~ai~~~~~~~----~~~~~nv~~~~~~s 269 (370)
T PLN02695 228 MWGDGKQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS 269 (370)
T ss_pred EeCCCCeEEeEEeHHHHHHHHHHHHhcc----CCCceEecCCCcee
Confidence 1234678899999999887542 24678887776554
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.5e-15 Score=144.48 Aligned_cols=226 Identities=13% Similarity=0.062 Sum_probs=154.2
Q ss_pred CCCCCCCCCcEEEEecCCchhHHHHHHHHHHc-CCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHH-HHHHHH
Q 022386 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRED-AVRVVE 81 (298)
Q Consensus 4 ~~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~-~~~~~~ 81 (298)
...++..++++++||||+|.||.+++++|+++ |++|++++|....... +.. ..++.++.+|++|..+ ++++++
T Consensus 307 ~~~~~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~----~~~-~~~~~~~~gDl~d~~~~l~~~l~ 381 (660)
T PRK08125 307 KPACSAKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISR----FLG-HPRFHFVEGDISIHSEWIEYHIK 381 (660)
T ss_pred cchhhhhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhh----hcC-CCceEEEeccccCcHHHHHHHhc
Confidence 35567778899999999999999999999986 7999999987643221 111 2357888999998654 343332
Q ss_pred HHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc
Q 022386 82 STINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 161 (298)
Q Consensus 82 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~ 161 (298)
++|++||+|+........ +..+..+++|+.++..+++++... +.++|++||...+.
T Consensus 382 -------~~D~ViHlAa~~~~~~~~----~~~~~~~~~Nv~~t~~ll~a~~~~-------------~~~~V~~SS~~vyg 437 (660)
T PRK08125 382 -------KCDVVLPLVAIATPIEYT----RNPLRVFELDFEENLKIIRYCVKY-------------NKRIIFPSTSEVYG 437 (660)
T ss_pred -------CCCEEEECccccCchhhc----cCHHHHHHhhHHHHHHHHHHHHhc-------------CCeEEEEcchhhcC
Confidence 699999999865432111 123457889999999999988743 13499999864332
Q ss_pred CC---------------C---CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc----CC----hH
Q 022386 162 AT---------------W---YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK----LA----PE 215 (298)
Q Consensus 162 ~~---------------~---~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~----~~----~~ 215 (298)
.. + +...|+.||.+.+.+++.++.+. |+++..+.|+.+..+..... .. -.
T Consensus 438 ~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~----g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~ 513 (660)
T PRK08125 438 MCTDKYFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEKE----GLRFTLFRPFNWMGPRLDNLNAARIGSSRAIT 513 (660)
T ss_pred CCCCCCcCccccccccCCCCCCccchHHHHHHHHHHHHHHHHhc----CCceEEEEEceeeCCCccccccccccccchHH
Confidence 10 1 12369999999999999886664 68999999999987643211 00 11
Q ss_pred HHHHHHhhh---------ccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCC
Q 022386 216 EIRSKATDY---------MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN 262 (298)
Q Consensus 216 ~~~~~~~~~---------~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~ 262 (298)
.+...+... ...+.+...+|+++++..++........|+.+++.+|.
T Consensus 514 ~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~ 569 (660)
T PRK08125 514 QLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPD 569 (660)
T ss_pred HHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHHHHHHhccccccCCeEEEcCCCC
Confidence 222222111 11234778999999998888643223468889988774
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=5.8e-15 Score=132.53 Aligned_cols=232 Identities=16% Similarity=0.094 Sum_probs=152.3
Q ss_pred cEEEEecCCchhHHHHHHHHHHc-CCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCC-CHHHHHHHHHHHHHHhCCc
Q 022386 13 KVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR-KREDAVRVVESTINHFGKL 90 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls-~~~~~~~~~~~~~~~~~~i 90 (298)
++++||||+|.||.+++++|+++ |++|++++|+...... +.. ...+.++.+|++ +.+.+..+++ ++
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~----~~~-~~~~~~~~~Dl~~~~~~~~~~~~-------~~ 69 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGD----LVN-HPRMHFFEGDITINKEWIEYHVK-------KC 69 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHH----hcc-CCCeEEEeCCCCCCHHHHHHHHc-------CC
Confidence 47999999999999999999986 6999999987543221 111 235888999998 6665555443 69
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC-------
Q 022386 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT------- 163 (298)
Q Consensus 91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~------- 163 (298)
|++||+|+....... .++-+..+++|+.++.++++++... +.++|++||...+...
T Consensus 70 d~ViH~aa~~~~~~~----~~~p~~~~~~n~~~~~~ll~aa~~~-------------~~~~v~~SS~~vyg~~~~~~~~e 132 (347)
T PRK11908 70 DVILPLVAIATPATY----VKQPLRVFELDFEANLPIVRSAVKY-------------GKHLVFPSTSEVYGMCPDEEFDP 132 (347)
T ss_pred CEEEECcccCChHHh----hcCcHHHHHHHHHHHHHHHHHHHhc-------------CCeEEEEecceeeccCCCcCcCc
Confidence 999999986432211 1223466789999999988877632 1359999987543210
Q ss_pred -----------CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC----C----hHHHHHHHhhh
Q 022386 164 -----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL----A----PEEIRSKATDY 224 (298)
Q Consensus 164 -----------~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~----~----~~~~~~~~~~~ 224 (298)
.+...|+.||.+.+.+++.++.+. ++.+..+.|+.+..+...... . -..+...+...
T Consensus 133 e~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~----~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~ 208 (347)
T PRK11908 133 EASPLVYGPINKPRWIYACSKQLMDRVIWAYGMEE----GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRG 208 (347)
T ss_pred cccccccCcCCCccchHHHHHHHHHHHHHHHHHHc----CCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCC
Confidence 012269999999999999887653 578888999888765422110 0 11222222111
Q ss_pred ---------ccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCC-CCCCCCCCchhHHHhhHHhh
Q 022386 225 ---------MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN-WLSNPRDLPKEAVNQLSRAV 282 (298)
Q Consensus 225 ---------~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~-~~~~~~~~~~~~~~~~~~~~ 282 (298)
...+.+...+|+++++..++........|+.+++.++. .++ .+.+.+.+...+
T Consensus 209 ~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~~~~~s-----~~e~~~~i~~~~ 271 (347)
T PRK11908 209 EPISLVDGGSQKRAFTDIDDGIDALMKIIENKDGVASGKIYNIGNPKNNHS-----VRELANKMLELA 271 (347)
T ss_pred CceEEecCCceeeccccHHHHHHHHHHHHhCccccCCCCeEEeCCCCCCcC-----HHHHHHHHHHHh
Confidence 12335789999999999888653222457889997653 333 345555554433
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.5e-15 Score=128.60 Aligned_cols=212 Identities=20% Similarity=0.164 Sum_probs=154.6
Q ss_pred EEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEE
Q 022386 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV 94 (298)
Q Consensus 15 ~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li 94 (298)
||||||+|.||.++++.|+++|..|+.+.|+........... ++.++.+|+.+.+.++++++.. .+|++|
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~dl~~~~~~~~~~~~~-----~~d~vi 70 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL-----NVEFVIGDLTDKEQLEKLLEKA-----NIDVVI 70 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT-----TEEEEESETTSHHHHHHHHHHH-----TESEEE
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc-----eEEEEEeecccccccccccccc-----CceEEE
Confidence 799999999999999999999999888888755332222211 6899999999999999999875 799999
Q ss_pred ECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC-----------
Q 022386 95 NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----------- 163 (298)
Q Consensus 95 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~----------- 163 (298)
|+|+.... ....+.....++.|+.++..+++++...-. .++|++||...+...
T Consensus 71 ~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~------------~~~i~~sS~~~y~~~~~~~~~e~~~~ 134 (236)
T PF01370_consen 71 HLAAFSSN----PESFEDPEEIIEANVQGTRNLLEAAREAGV------------KRFIFLSSASVYGDPDGEPIDEDSPI 134 (236)
T ss_dssp EEBSSSSH----HHHHHSHHHHHHHHHHHHHHHHHHHHHHTT------------SEEEEEEEGGGGTSSSSSSBETTSGC
T ss_pred Eeeccccc----cccccccccccccccccccccccccccccc------------cccccccccccccccccccccccccc
Confidence 99985321 112245677888899888888888774433 359999996544322
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCc---ccCcCChHHHHHHHhhhc---------cCCCCC
Q 022386 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA---GVSKLAPEEIRSKATDYM---------AAYKFG 231 (298)
Q Consensus 164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~---~~~~~~~~~~~~~~~~~~---------~~~~~~ 231 (298)
.+...|+.+|...+.+++.+..+. ++++..+.|+.+..+. ......-..+........ ..+.+.
T Consensus 135 ~~~~~Y~~~K~~~e~~~~~~~~~~----~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 210 (236)
T PF01370_consen 135 NPLSPYGASKRAAEELLRDYAKKY----GLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFI 210 (236)
T ss_dssp CHSSHHHHHHHHHHHHHHHHHHHH----TSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEE
T ss_pred cccccccccccccccccccccccc----ccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceE
Confidence 124569999999999999998875 5999999999998776 111212233443333322 123356
Q ss_pred CHHHHHHHHHHhcCCCCCCccccEEEe
Q 022386 232 EKWDIAMAALYLASDAGKYVNGNTLIV 258 (298)
Q Consensus 232 ~~~dva~~~~~L~s~~~~~~~G~~i~~ 258 (298)
..+|+++++..++.... ..|+.++|
T Consensus 211 ~v~D~a~~~~~~~~~~~--~~~~~yNi 235 (236)
T PF01370_consen 211 HVDDLAEAIVAALENPK--AAGGIYNI 235 (236)
T ss_dssp EHHHHHHHHHHHHHHSC--TTTEEEEE
T ss_pred EHHHHHHHHHHHHhCCC--CCCCEEEe
Confidence 88899999999997644 56777776
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.4e-15 Score=135.82 Aligned_cols=233 Identities=19% Similarity=0.116 Sum_probs=154.3
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHH--HHHHHHhCCCCeEEEEccCCCHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRS--AVAALHSLGIPAIGLEGDVRKREDAVRVVES 82 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~ 82 (298)
+...+.++++++||||+|+||+++++.|+++|++|+++.|+...... ..+.+......+.++.+|++|.++++++++.
T Consensus 53 ~~~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~ 132 (390)
T PLN02657 53 FRSKEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFS 132 (390)
T ss_pred ccccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHH
Confidence 34456778899999999999999999999999999999998654321 1122222234688899999999999998874
Q ss_pred HHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC
Q 022386 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (298)
Q Consensus 83 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~ 162 (298)
.. .++|++|||++..... . ...+++|+.++.++++++. +.+ -+++|++||.....
T Consensus 133 ~~---~~~D~Vi~~aa~~~~~-----~----~~~~~vn~~~~~~ll~aa~----~~g--------v~r~V~iSS~~v~~- 187 (390)
T PLN02657 133 EG---DPVDVVVSCLASRTGG-----V----KDSWKIDYQATKNSLDAGR----EVG--------AKHFVLLSAICVQK- 187 (390)
T ss_pred hC---CCCcEEEECCccCCCC-----C----ccchhhHHHHHHHHHHHHH----HcC--------CCEEEEEeeccccC-
Confidence 31 2799999999842211 1 1235678888888877764 222 35799999976542
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhcc----------CCCCCC
Q 022386 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA----------AYKFGE 232 (298)
Q Consensus 163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~----------~~~~~~ 232 (298)
+...|..+|...+...+. . ..+++...+.|+.+..+.. ..........+ ...+.+
T Consensus 188 --p~~~~~~sK~~~E~~l~~-----~-~~gl~~tIlRp~~~~~~~~-------~~~~~~~~g~~~~~~GdG~~~~~~~I~ 252 (390)
T PLN02657 188 --PLLEFQRAKLKFEAELQA-----L-DSDFTYSIVRPTAFFKSLG-------GQVEIVKDGGPYVMFGDGKLCACKPIS 252 (390)
T ss_pred --cchHHHHHHHHHHHHHHh-----c-cCCCCEEEEccHHHhcccH-------HHHHhhccCCceEEecCCcccccCcee
Confidence 345688899888777654 1 3479999999988753211 11111111111 112467
Q ss_pred HHHHHHHHHHhcCCCCCCccccEEEeCCC-CCCCCCCCCchhHHHhhHHhhhh
Q 022386 233 KWDIAMAALYLASDAGKYVNGNTLIVDGG-NWLSNPRDLPKEAVNQLSRAVER 284 (298)
Q Consensus 233 ~~dva~~~~~L~s~~~~~~~G~~i~~dgG-~~~~~~~~~~~~~~~~~~~~~~~ 284 (298)
.+|+|..+..++.++. ..|+.+++.|. ..++ .+.+.+.+.+.+.+
T Consensus 253 v~DlA~~i~~~~~~~~--~~~~~~~Iggp~~~~S-----~~Eia~~l~~~lG~ 298 (390)
T PLN02657 253 EADLASFIADCVLDES--KINKVLPIGGPGKALT-----PLEQGEMLFRILGK 298 (390)
T ss_pred HHHHHHHHHHHHhCcc--ccCCEEEcCCCCcccC-----HHHHHHHHHHHhCC
Confidence 8899999988875432 34788888663 3443 35555555554443
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.1e-14 Score=141.47 Aligned_cols=228 Identities=13% Similarity=0.042 Sum_probs=153.4
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHc--CCcEEEEcCCh--hHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKH--GAAIAIMGRRK--TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~--G~~Vv~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
..++|+||||||+|.||.+++++|+++ |++|+++++.. +........ ....++.++.+|++|.+.+.+++..
T Consensus 3 ~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~--~~~~~v~~~~~Dl~d~~~~~~~~~~-- 78 (668)
T PLN02260 3 TYEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPS--KSSPNFKFVKGDIASADLVNYLLIT-- 78 (668)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhc--ccCCCeEEEECCCCChHHHHHHHhh--
Confidence 346789999999999999999999998 67888888742 122111110 1134688999999999887766532
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC--
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-- 162 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~-- 162 (298)
.++|++||+|+...... ......+.+++|+.++..+++++...- . ..++|++||...+..
T Consensus 79 ---~~~D~ViHlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~~---~--------vkr~I~~SS~~vyg~~~ 140 (668)
T PLN02260 79 ---EGIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKVTG---Q--------IRRFIHVSTDEVYGETD 140 (668)
T ss_pred ---cCCCEEEECCCccCchh----hhhCHHHHHHHHHHHHHHHHHHHHhcC---C--------CcEEEEEcchHHhCCCc
Confidence 37999999999643211 122335678999999999988875321 0 246999999654321
Q ss_pred ------------CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhc-----
Q 022386 163 ------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM----- 225 (298)
Q Consensus 163 ------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~----- 225 (298)
..+...|+.+|.+.+.+++.+..+. ++++..+.|+.+..+.......-+.+........
T Consensus 141 ~~~~~~~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~~----~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~ 216 (668)
T PLN02260 141 EDADVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY----GLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIH 216 (668)
T ss_pred cccccCccccCCCCCCCCcHHHHHHHHHHHHHHHHHc----CCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEe
Confidence 1123579999999999999887664 5889999999998764322111122222222111
Q ss_pred ----cCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 226 ----AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 226 ----~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
..+.+...+|+++++..++... ..|..+++.++..++
T Consensus 217 g~g~~~r~~ihV~Dva~a~~~~l~~~---~~~~vyni~~~~~~s 257 (668)
T PLN02260 217 GDGSNVRSYLYCEDVAEAFEVVLHKG---EVGHVYNIGTKKERR 257 (668)
T ss_pred cCCCceEeeEEHHHHHHHHHHHHhcC---CCCCEEEECCCCeeE
Confidence 1124578999999998887532 236788987776554
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.9e-14 Score=127.19 Aligned_cols=229 Identities=15% Similarity=0.088 Sum_probs=150.6
Q ss_pred EEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 022386 15 ALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (298)
Q Consensus 15 ~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l 93 (298)
+|||||+|.||.++++.|.++|+ .|++++|..... .. ..+. ...+..|+++.+.++.+.+. .+.++|++
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~-~~~~-----~~~~~~d~~~~~~~~~~~~~---~~~~~D~v 70 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KF-LNLA-----DLVIADYIDKEDFLDRLEKG---AFGKIEAI 70 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hh-hhhh-----heeeeccCcchhHHHHHHhh---ccCCCCEE
Confidence 68999999999999999999998 688887654321 11 1111 12456788888777665553 34689999
Q ss_pred EECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC-----------
Q 022386 94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA----------- 162 (298)
Q Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~----------- 162 (298)
||+|+.... ..++.+..+++|+.++.++++++... +.++|++||...+..
T Consensus 71 vh~A~~~~~------~~~~~~~~~~~n~~~~~~ll~~~~~~-------------~~~~v~~SS~~vy~~~~~~~~e~~~~ 131 (314)
T TIGR02197 71 FHQGACSDT------TETDGEYMMENNYQYSKRLLDWCAEK-------------GIPFIYASSAATYGDGEAGFREGREL 131 (314)
T ss_pred EECccccCc------cccchHHHHHHHHHHHHHHHHHHHHh-------------CCcEEEEccHHhcCCCCCCcccccCc
Confidence 999985321 22345678899999999999987642 135999999654321
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC----hHHHHHHHhhhc-------------
Q 022386 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA----PEEIRSKATDYM------------- 225 (298)
Q Consensus 163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~----~~~~~~~~~~~~------------- 225 (298)
..+...|+.+|.+.+.+++....+. ..++++..+.|+.+..+....... -..+........
T Consensus 132 ~~p~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (314)
T TIGR02197 132 ERPLNVYGYSKFLFDQYVRRRVLPE--ALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKD 209 (314)
T ss_pred CCCCCHHHHHHHHHHHHHHHHhHhh--ccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCC
Confidence 1135679999999999998644332 225788889998887664221100 111222221111
Q ss_pred --cCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhh
Q 022386 226 --AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVE 283 (298)
Q Consensus 226 --~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~ 283 (298)
..+.+...+|+++++..++.. ..+..+++.++..++ .+.+.+.+.+.+.
T Consensus 210 g~~~~~~i~v~D~a~~i~~~~~~----~~~~~yni~~~~~~s-----~~e~~~~i~~~~g 260 (314)
T TIGR02197 210 GEQLRDFVYVKDVVDVNLWLLEN----GVSGIFNLGTGRARS-----FNDLADAVFKALG 260 (314)
T ss_pred CCceeeeEEHHHHHHHHHHHHhc----ccCceEEcCCCCCcc-----HHHHHHHHHHHhC
Confidence 113477899999999998864 235688888876654 4555666655544
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.5e-14 Score=127.76 Aligned_cols=226 Identities=13% Similarity=0.071 Sum_probs=145.4
Q ss_pred EEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH--HhCCccE
Q 022386 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN--HFGKLDI 92 (298)
Q Consensus 15 ~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~--~~~~id~ 92 (298)
++||||+|.||.+++++|+++|+.++++.++....... . .+..+|+.|..+.+.+++.+.+ .++++|+
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-~---------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~ 71 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-V---------NLVDLDIADYMDKEDFLAQIMAGDDFGDIEA 71 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-H---------hhhhhhhhhhhhHHHHHHHHhcccccCCccE
Confidence 79999999999999999999999766655543221111 0 1234577776666666665542 3468999
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC---------
Q 022386 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--------- 163 (298)
Q Consensus 93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~--------- 163 (298)
+||+|+..... +.+. +..++.|+.++.++++++... +.++|++||...+...
T Consensus 72 Vih~A~~~~~~---~~~~---~~~~~~n~~~t~~ll~~~~~~-------------~~~~i~~SS~~vyg~~~~~~~~E~~ 132 (308)
T PRK11150 72 IFHEGACSSTT---EWDG---KYMMDNNYQYSKELLHYCLER-------------EIPFLYASSAATYGGRTDDFIEERE 132 (308)
T ss_pred EEECceecCCc---CCCh---HHHHHHHHHHHHHHHHHHHHc-------------CCcEEEEcchHHhCcCCCCCCccCC
Confidence 99999854322 1122 346899999999999887532 1349999997543211
Q ss_pred --CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc-CChH---HHHHHHhhhc----------cC
Q 022386 164 --WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK-LAPE---EIRSKATDYM----------AA 227 (298)
Q Consensus 164 --~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~-~~~~---~~~~~~~~~~----------~~ 227 (298)
.+...|+.+|.+.+.+++.+..+. ++++..+.|+.+..+..... .... .+...+.... ..
T Consensus 133 ~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~ 208 (308)
T PRK11150 133 YEKPLNVYGYSKFLFDEYVRQILPEA----NSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFK 208 (308)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHc----CCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCcee
Confidence 123579999999999998876552 68999999999887643221 1111 1111222111 11
Q ss_pred CCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhh
Q 022386 228 YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAV 282 (298)
Q Consensus 228 ~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~ 282 (298)
+.+...+|+++++..++... .+..+++.+|..++ .+.+.+.+.+.+
T Consensus 209 r~~i~v~D~a~a~~~~~~~~----~~~~yni~~~~~~s-----~~el~~~i~~~~ 254 (308)
T PRK11150 209 RDFVYVGDVAAVNLWFWENG----VSGIFNCGTGRAES-----FQAVADAVLAYH 254 (308)
T ss_pred eeeeeHHHHHHHHHHHHhcC----CCCeEEcCCCCcee-----HHHHHHHHHHHh
Confidence 34578999999988887542 24588887776654 244444444443
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.3e-15 Score=130.28 Aligned_cols=221 Identities=20% Similarity=0.192 Sum_probs=153.2
Q ss_pred EEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhC--CCCeE----EEEccCCCHHHHHHHHHHHHHHh
Q 022386 15 ALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSL--GIPAI----GLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 15 ~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~--~~~~~----~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
+|||||+|.||.+++++|++.+. .+++++++...+-.+..++... ..++. ++.+|++|.+.+.+++++.
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~---- 76 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY---- 76 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence 69999999999999999999987 6999999999999988888542 22343 4578999999999998753
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
++|+++|.|+.-.. ++-+.. ..+.+++|+.|+.++++++..+-. .++|++|+--+..| ..
T Consensus 77 -~pdiVfHaAA~KhV-pl~E~~---p~eav~tNv~GT~nv~~aa~~~~v------------~~~v~ISTDKAv~P---tn 136 (293)
T PF02719_consen 77 -KPDIVFHAAALKHV-PLMEDN---PFEAVKTNVLGTQNVAEAAIEHGV------------ERFVFISTDKAVNP---TN 136 (293)
T ss_dssp -T-SEEEE------H-HHHCCC---HHHHHHHHCHHHHHHHHHHHHTT-------------SEEEEEEECGCSS-----S
T ss_pred -CCCEEEEChhcCCC-ChHHhC---HHHHHHHHHHHHHHHHHHHHHcCC------------CEEEEccccccCCC---Cc
Confidence 89999999985322 222223 356799999999999999997643 45999999776544 46
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccC--------CCCCCHHHHHHH
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA--------YKFGEKWDIAMA 239 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~dva~~ 239 (298)
.|++||...+.++.+++...+ ..+.+..+|.-|.|-... ..--+-+.+++...-|. +.+.+.+|.++.
T Consensus 137 vmGatKrlaE~l~~~~~~~~~-~~~t~f~~VRFGNVlgS~---GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~L 212 (293)
T PF02719_consen 137 VMGATKRLAEKLVQAANQYSG-NSDTKFSSVRFGNVLGSR---GSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQL 212 (293)
T ss_dssp HHHHHHHHHHHHHHHHCCTSS-SS--EEEEEEE-EETTGT---TSCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhCC-CCCcEEEEEEecceecCC---CcHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHH
Confidence 899999999999999988864 457899999999997432 12235555555554443 457799999999
Q ss_pred HHHhcCCCCCCccccEEEeCCCCCCCC
Q 022386 240 ALYLASDAGKYVNGNTLIVDGGNWLSN 266 (298)
Q Consensus 240 ~~~L~s~~~~~~~G~~i~~dgG~~~~~ 266 (298)
+...+.-. ..|+++..|-|..+..
T Consensus 213 vl~a~~~~---~~geifvl~mg~~v~I 236 (293)
T PF02719_consen 213 VLQAAALA---KGGEIFVLDMGEPVKI 236 (293)
T ss_dssp HHHHHHH-----TTEEEEE---TCEEC
T ss_pred HHHHHhhC---CCCcEEEecCCCCcCH
Confidence 87766432 3489999999988753
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.1e-14 Score=124.90 Aligned_cols=212 Identities=16% Similarity=0.125 Sum_probs=147.4
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc-cE
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL-DI 92 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i-d~ 92 (298)
.+|||||+|.||.+++++|+++|++|+.++|......... ..+.++.+|+++.+.+...++ .. |.
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~-------~~~d~ 67 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-------SGVEFVVLDLTDRDLVDELAK-------GVPDA 67 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-------cccceeeecccchHHHHHHHh-------cCCCE
Confidence 3999999999999999999999999999999765322221 357788999999855555554 23 99
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC---------
Q 022386 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--------- 163 (298)
Q Consensus 93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~--------- 163 (298)
+||+|+........ .. .....+++|+.++.++++++.. .+ ..++|+.||.....+.
T Consensus 68 vih~aa~~~~~~~~--~~-~~~~~~~~nv~gt~~ll~aa~~----~~--------~~~~v~~ss~~~~~~~~~~~~~~E~ 132 (314)
T COG0451 68 VIHLAAQSSVPDSN--AS-DPAEFLDVNVDGTLNLLEAARA----AG--------VKRFVFASSVSVVYGDPPPLPIDED 132 (314)
T ss_pred EEEccccCchhhhh--hh-CHHHHHHHHHHHHHHHHHHHHH----cC--------CCeEEEeCCCceECCCCCCCCcccc
Confidence 99999965432111 11 3456899999999999999987 11 3558886665533321
Q ss_pred --CCc--hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC---ChHHHHHHHhhhcc---C------
Q 022386 164 --WYQ--IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---APEEIRSKATDYMA---A------ 227 (298)
Q Consensus 164 --~~~--~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~---~~~~~~~~~~~~~~---~------ 227 (298)
+.. ..|+.+|.+.+.+++....+. |+.+..+.|+.+..+...... .............+ .
T Consensus 133 ~~~~~p~~~Yg~sK~~~E~~~~~~~~~~----~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (314)
T COG0451 133 LGPPRPLNPYGVSKLAAEQLLRAYARLY----GLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQ 208 (314)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHh----CCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCce
Confidence 111 149999999999999998832 699999999988876544431 22222222222222 1
Q ss_pred -CCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCC
Q 022386 228 -YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN 262 (298)
Q Consensus 228 -~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~ 262 (298)
+.+...+|+++++..++..... + .+++.++.
T Consensus 209 ~~~~i~v~D~a~~~~~~~~~~~~---~-~~ni~~~~ 240 (314)
T COG0451 209 TRDFVYVDDVADALLLALENPDG---G-VFNIGSGT 240 (314)
T ss_pred eEeeEeHHHHHHHHHHHHhCCCC---c-EEEeCCCC
Confidence 1256789999999999975433 2 88887775
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.63 E-value=7.7e-15 Score=123.84 Aligned_cols=249 Identities=21% Similarity=0.136 Sum_probs=160.6
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
+++|||||+|-||.+++..|++.|++|++++.-+....+...... ..|++.|+.|.+-+++.|++. +||.
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~-----~~f~~gDi~D~~~L~~vf~~~-----~ida 70 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ-----FKFYEGDLLDRALLTAVFEEN-----KIDA 70 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhcc-----CceEEeccccHHHHHHHHHhc-----CCCE
Confidence 479999999999999999999999999999987654444433322 678999999999999999864 8999
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC--------
Q 022386 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-------- 164 (298)
Q Consensus 93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~-------- 164 (298)
+||.||....+. +.+.-.+.++.|+.+++.|++++...-.+ +|||-||.+-+ +.|
T Consensus 71 ViHFAa~~~VgE----Sv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~------------~~vFSStAavY-G~p~~~PI~E~ 133 (329)
T COG1087 71 VVHFAASISVGE----SVQNPLKYYDNNVVGTLNLIEAMLQTGVK------------KFIFSSTAAVY-GEPTTSPISET 133 (329)
T ss_pred EEECccccccch----hhhCHHHHHhhchHhHHHHHHHHHHhCCC------------EEEEecchhhc-CCCCCcccCCC
Confidence 999999654332 44555778999999999999988765532 37766665543 332
Q ss_pred ----CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCc-----ccCcCCh----HHHHHHH----------
Q 022386 165 ----YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA-----GVSKLAP----EEIRSKA---------- 221 (298)
Q Consensus 165 ----~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~-----~~~~~~~----~~~~~~~---------- 221 (298)
+...|+.||..++.+.+.++.-. +.++..+.=-.+.... ....... +-..+-.
T Consensus 134 ~~~~p~NPYG~sKlm~E~iL~d~~~a~----~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~if 209 (329)
T COG1087 134 SPLAPINPYGRSKLMSEEILRDAAKAN----PFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIF 209 (329)
T ss_pred CCCCCCCcchhHHHHHHHHHHHHHHhC----CCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEe
Confidence 34589999999999999997764 3566655432222110 0011111 1111111
Q ss_pred ------hhhccCCCCCCHHHHHHHHHHhcCCCCCCccc--cEEEeCCCCCCCCCCCCchhHHHhhHHhhhhccCCCCCCC
Q 022386 222 ------TDYMAAYKFGEKWDIAMAALYLASDAGKYVNG--NTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKSRDSPVGI 293 (298)
Q Consensus 222 ------~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G--~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (298)
.+....+......|+|.+-+..+.--.. .| ..+++..|.--+. .+.-+.+.+.....++-+..++..|+
T Consensus 210 G~DY~T~DGT~iRDYIHV~DLA~aH~~Al~~L~~--~g~~~~~NLG~G~G~SV-~evi~a~~~vtg~~ip~~~~~RR~GD 286 (329)
T COG1087 210 GDDYDTKDGTCIRDYIHVDDLADAHVLALKYLKE--GGSNNIFNLGSGNGFSV-LEVIEAAKKVTGRDIPVEIAPRRAGD 286 (329)
T ss_pred CCCCCCCCCCeeeeeeehhHHHHHHHHHHHHHHh--CCceeEEEccCCCceeH-HHHHHHHHHHhCCcCceeeCCCCCCC
Confidence 1222334566778999887665532111 23 4677766644431 11112222223455555666777788
Q ss_pred CC
Q 022386 294 PK 295 (298)
Q Consensus 294 ~~ 295 (298)
|.
T Consensus 287 pa 288 (329)
T COG1087 287 PA 288 (329)
T ss_pred Cc
Confidence 74
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=7.9e-15 Score=130.04 Aligned_cols=218 Identities=14% Similarity=0.035 Sum_probs=141.8
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l 93 (298)
+++||||||.||++++++|+++|++|+++.|+.+... .+.. ..+.++.+|++|++++.++++ .+|++
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~----~l~~--~~v~~v~~Dl~d~~~l~~al~-------g~d~V 68 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKAS----FLKE--WGAELVYGDLSLPETLPPSFK-------GVTAI 68 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhh----hHhh--cCCEEEECCCCCHHHHHHHHC-------CCCEE
Confidence 7999999999999999999999999999999864322 1222 247889999999998877765 68999
Q ss_pred EECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHHHH
Q 022386 94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAK 173 (298)
Q Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK 173 (298)
||+++.... +.....++|+.++.++++++... + -.++|++||..... + +...|..+|
T Consensus 69 i~~~~~~~~---------~~~~~~~~~~~~~~~l~~aa~~~----g--------vkr~I~~Ss~~~~~-~-~~~~~~~~K 125 (317)
T CHL00194 69 IDASTSRPS---------DLYNAKQIDWDGKLALIEAAKAA----K--------IKRFIFFSILNAEQ-Y-PYIPLMKLK 125 (317)
T ss_pred EECCCCCCC---------CccchhhhhHHHHHHHHHHHHHc----C--------CCEEEEeccccccc-c-CCChHHHHH
Confidence 998763211 11235667888888888777643 1 24699998854321 1 234578888
Q ss_pred HHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHH----HHhhhccCCCCCCHHHHHHHHHHhcCCCCC
Q 022386 174 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS----KATDYMAAYKFGEKWDIAMAALYLASDAGK 249 (298)
Q Consensus 174 ~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~dva~~~~~L~s~~~~ 249 (298)
...+.+.+ ..++++..+.|+.+.......... + ... ..........+.+.+|+|+++..++..+.
T Consensus 126 ~~~e~~l~--------~~~l~~tilRp~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~- 194 (317)
T CHL00194 126 SDIEQKLK--------KSGIPYTIFRLAGFFQGLISQYAI-P-ILEKQPIWITNESTPISYIDTQDAAKFCLKSLSLPE- 194 (317)
T ss_pred HHHHHHHH--------HcCCCeEEEeecHHhhhhhhhhhh-h-hccCCceEecCCCCccCccCHHHHHHHHHHHhcCcc-
Confidence 87766553 236888889998664221100000 0 000 00000111235677999999988886432
Q ss_pred CccccEEEeCCCCCCCCCCCCchhHHHhhHHhhhh
Q 022386 250 YVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVER 284 (298)
Q Consensus 250 ~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~~ 284 (298)
..|+++++.|+..++ .+.+.+.+.+.+..
T Consensus 195 -~~~~~~ni~g~~~~s-----~~el~~~~~~~~g~ 223 (317)
T CHL00194 195 -TKNKTFPLVGPKSWN-----SSEIISLCEQLSGQ 223 (317)
T ss_pred -ccCcEEEecCCCccC-----HHHHHHHHHHHhCC
Confidence 248899998887665 35555555555544
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.62 E-value=8.7e-14 Score=128.29 Aligned_cols=216 Identities=14% Similarity=0.043 Sum_probs=143.7
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHH-HHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRS-AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
++++|+||||+|.||.+++++|+++|++|+++++......+ ....+ ...++.++..|+.+.. + ..
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~--~~~~~~~i~~D~~~~~-----l-------~~ 183 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHF--SNPNFELIRHDVVEPI-----L-------LE 183 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhc--cCCceEEEECCccChh-----h-------cC
Confidence 56899999999999999999999999999998875322111 11111 1245788889987652 1 25
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC-------
Q 022386 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA------- 162 (298)
Q Consensus 90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~------- 162 (298)
+|++||+|+....... . .+..+.+++|+.++.++++++... +.++|++||...+..
T Consensus 184 ~D~ViHlAa~~~~~~~-~---~~p~~~~~~Nv~gt~nLleaa~~~-------------g~r~V~~SS~~VYg~~~~~p~~ 246 (442)
T PLN02206 184 VDQIYHLACPASPVHY-K---FNPVKTIKTNVVGTLNMLGLAKRV-------------GARFLLTSTSEVYGDPLQHPQV 246 (442)
T ss_pred CCEEEEeeeecchhhh-h---cCHHHHHHHHHHHHHHHHHHHHHh-------------CCEEEEECChHHhCCCCCCCCC
Confidence 8999999986432111 1 123568899999999999988643 135999999764421
Q ss_pred ---------CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC--ChHHHHHHHhhhcc-----
Q 022386 163 ---------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL--APEEIRSKATDYMA----- 226 (298)
Q Consensus 163 ---------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~----- 226 (298)
......|+.+|.+.+.+++.+.++. ++++..+.|+.+..+...... .-..+........+
T Consensus 247 E~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~~----g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g 322 (442)
T PLN02206 247 ETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA----NVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYG 322 (442)
T ss_pred ccccccCCCCCccchHHHHHHHHHHHHHHHHHHh----CCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeC
Confidence 1113579999999999998876553 588899999888765422111 11222222221111
Q ss_pred ----CCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 227 ----AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 227 ----~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
.+.+...+|+++++..++... . +..+++.+|..++
T Consensus 323 ~G~~~rdfi~V~Dva~ai~~a~e~~---~-~g~yNIgs~~~~s 361 (442)
T PLN02206 323 DGKQTRSFQFVSDLVEGLMRLMEGE---H-VGPFNLGNPGEFT 361 (442)
T ss_pred CCCEEEeEEeHHHHHHHHHHHHhcC---C-CceEEEcCCCcee
Confidence 123678999999998887532 2 3378887776554
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.9e-14 Score=129.70 Aligned_cols=216 Identities=12% Similarity=0.016 Sum_probs=143.4
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
.++++||||+|.||.+++++|+++|++|++++|...........+. ...++.++..|+.+.. + .++|
T Consensus 120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~-~~~~~~~~~~Di~~~~-----~-------~~~D 186 (436)
T PLN02166 120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLF-GNPRFELIRHDVVEPI-----L-------LEVD 186 (436)
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhc-cCCceEEEECcccccc-----c-------cCCC
Confidence 4689999999999999999999999999999886322111111111 1235778888987642 1 2689
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC---------
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA--------- 162 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~--------- 162 (298)
++||+|+........ .+-.+.+++|+.++..+++++... +.++|++||...+..
T Consensus 187 ~ViHlAa~~~~~~~~----~~p~~~~~~Nv~gT~nLleaa~~~-------------g~r~V~~SS~~VYg~~~~~p~~E~ 249 (436)
T PLN02166 187 QIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAKRV-------------GARFLLTSTSEVYGDPLEHPQKET 249 (436)
T ss_pred EEEECceeccchhhc----cCHHHHHHHHHHHHHHHHHHHHHh-------------CCEEEEECcHHHhCCCCCCCCCcc
Confidence 999999864322111 123577899999999999888743 135999988754321
Q ss_pred -------CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC--ChHHHHHHHhhhc--------
Q 022386 163 -------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL--APEEIRSKATDYM-------- 225 (298)
Q Consensus 163 -------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~-------- 225 (298)
......|+.+|.+.+.+++.+.+.. ++++..+.|+.+..+...... .-..+........
T Consensus 250 ~~~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~~----~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g 325 (436)
T PLN02166 250 YWGNVNPIGERSCYDEGKRTAETLAMDYHRGA----GVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDG 325 (436)
T ss_pred ccccCCCCCCCCchHHHHHHHHHHHHHHHHHh----CCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCC
Confidence 1123469999999999999886653 688899999888776432111 1122222222111
Q ss_pred -cCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 226 -AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 226 -~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
..+.+...+|+++++..++... . +..+++.+|..++
T Consensus 326 ~~~rdfi~V~Dva~ai~~~~~~~---~-~giyNIgs~~~~S 362 (436)
T PLN02166 326 KQTRSFQYVSDLVDGLVALMEGE---H-VGPFNLGNPGEFT 362 (436)
T ss_pred CeEEeeEEHHHHHHHHHHHHhcC---C-CceEEeCCCCcEe
Confidence 1234678899999998887532 1 3478887776554
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.60 E-value=2e-13 Score=119.13 Aligned_cols=198 Identities=15% Similarity=0.097 Sum_probs=136.3
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l 93 (298)
+++||||+|.||.+++++|.++|++|+++.|+ .+|+.+.++++++++.. .+|++
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~---------------------~~d~~~~~~~~~~~~~~-----~~d~v 54 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS---------------------QLDLTDPEALERLLRAI-----RPDAV 54 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---------------------ccCCCCHHHHHHHHHhC-----CCCEE
Confidence 37999999999999999999999999999885 46999999998887642 68999
Q ss_pred EECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC----------
Q 022386 94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT---------- 163 (298)
Q Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~---------- 163 (298)
||+|+...... ........+++|+.++..+++++... +.++|++||...+.+.
T Consensus 55 i~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~-------------~~~~v~~Ss~~vy~~~~~~~~~E~~~ 117 (287)
T TIGR01214 55 VNTAAYTDVDG----AESDPEKAFAVNALAPQNLARAAARH-------------GARLVHISTDYVFDGEGKRPYREDDA 117 (287)
T ss_pred EECCccccccc----cccCHHHHHHHHHHHHHHHHHHHHHc-------------CCeEEEEeeeeeecCCCCCCCCCCCC
Confidence 99998643211 11234567899999999999886531 2359999986433211
Q ss_pred -CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhcc-------CCCCCCHHH
Q 022386 164 -WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA-------AYKFGEKWD 235 (298)
Q Consensus 164 -~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~d 235 (298)
.+...|+.+|.+.+.+++.+ +.++..+.|+.+..+...... ...+........+ ...+...+|
T Consensus 118 ~~~~~~Y~~~K~~~E~~~~~~--------~~~~~ilR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~v~D 188 (287)
T TIGR01214 118 TNPLNVYGQSKLAGEQAIRAA--------GPNALIVRTSWLYGGGGGRNF-VRTMLRLAGRGEELRVVDDQIGSPTYAKD 188 (287)
T ss_pred CCCcchhhHHHHHHHHHHHHh--------CCCeEEEEeeecccCCCCCCH-HHHHHHHhhcCCCceEecCCCcCCcCHHH
Confidence 12457999999999888754 357889999999766421111 1122222221111 123456899
Q ss_pred HHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 236 IAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 236 va~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
+++++..++... . .-+..+++-++..++
T Consensus 189 va~a~~~~~~~~-~-~~~~~~ni~~~~~~s 216 (287)
T TIGR01214 189 LARVIAALLQRL-A-RARGVYHLANSGQCS 216 (287)
T ss_pred HHHHHHHHHhhc-c-CCCCeEEEECCCCcC
Confidence 999999988543 1 125577776665554
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.3e-13 Score=118.82 Aligned_cols=203 Identities=13% Similarity=0.045 Sum_probs=137.8
Q ss_pred EEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEE
Q 022386 16 LLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVN 95 (298)
Q Consensus 16 lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~ 95 (298)
|||||+|.||.++++.|+++|+.|+++.+. ..+|+++.++++++++.. ++|++||
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~--------------------~~~Dl~~~~~l~~~~~~~-----~~d~Vih 55 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH--------------------KELDLTRQADVEAFFAKE-----KPTYVIL 55 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecc--------------------ccCCCCCHHHHHHHHhcc-----CCCEEEE
Confidence 699999999999999999999988766432 247999999988887752 6899999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC------------
Q 022386 96 AAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT------------ 163 (298)
Q Consensus 96 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~------------ 163 (298)
+|+....... ..+..+..+++|+.++..+++++...- -.++|++||...+.+.
T Consensus 56 ~A~~~~~~~~---~~~~~~~~~~~n~~~~~~ll~~~~~~~------------~~~~i~~SS~~vyg~~~~~~~~E~~~~~ 120 (306)
T PLN02725 56 AAAKVGGIHA---NMTYPADFIRENLQIQTNVIDAAYRHG------------VKKLLFLGSSCIYPKFAPQPIPETALLT 120 (306)
T ss_pred eeeeecccch---hhhCcHHHHHHHhHHHHHHHHHHHHcC------------CCeEEEeCceeecCCCCCCCCCHHHhcc
Confidence 9986321110 111234568899999999998887431 2469999886543211
Q ss_pred ----CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc----CChHHHHHHH----h---------
Q 022386 164 ----WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK----LAPEEIRSKA----T--------- 222 (298)
Q Consensus 164 ----~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~----~~~~~~~~~~----~--------- 222 (298)
|....|+.||.+.+.+++.+..+. ++++..+.|+.+..+..... ..-+.....+ .
T Consensus 121 ~~~~p~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 196 (306)
T PLN02725 121 GPPEPTNEWYAIAKIAGIKMCQAYRIQY----GWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVW 196 (306)
T ss_pred CCCCCCcchHHHHHHHHHHHHHHHHHHh----CCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEc
Confidence 112249999999999998886654 58999999999987642110 0011111111 1
Q ss_pred -hhccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 223 -DYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 223 -~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
.....+.+...+|+++++..++.... .+..+++.+|..++
T Consensus 197 ~~g~~~~~~i~v~Dv~~~~~~~~~~~~---~~~~~ni~~~~~~s 237 (306)
T PLN02725 197 GSGSPLREFLHVDDLADAVVFLMRRYS---GAEHVNVGSGDEVT 237 (306)
T ss_pred CCCCeeeccccHHHHHHHHHHHHhccc---cCcceEeCCCCccc
Confidence 11122367889999999999886432 23456887776654
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=7.7e-13 Score=128.60 Aligned_cols=232 Identities=16% Similarity=0.108 Sum_probs=146.5
Q ss_pred EEEEecCCchhHHHHHHHHH--HcCCcEEEEcCChhHHHHHHHHHHhCC-CCeEEEEccCCCHHHH--HHHHHHHHHHhC
Q 022386 14 VALLTGGGSGIGFEISLQLG--KHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDA--VRVVESTINHFG 88 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~--~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dls~~~~~--~~~~~~~~~~~~ 88 (298)
++|||||+|.||.+++++|+ +.|++|++++|+... ..........+ .++.++.+|+++++.. ...++.+ .
T Consensus 2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----~ 76 (657)
T PRK07201 2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----G 76 (657)
T ss_pred eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----c
Confidence 79999999999999999999 589999999996432 22222222222 4688999999985310 1112222 4
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC-----
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----- 163 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~----- 163 (298)
++|++||+|+..... .+ ....+++|+.++..+++++... + ..++|++||...+...
T Consensus 77 ~~D~Vih~Aa~~~~~----~~---~~~~~~~nv~gt~~ll~~a~~~----~--------~~~~v~~SS~~v~g~~~~~~~ 137 (657)
T PRK07201 77 DIDHVVHLAAIYDLT----AD---EEAQRAANVDGTRNVVELAERL----Q--------AATFHHVSSIAVAGDYEGVFR 137 (657)
T ss_pred CCCEEEECceeecCC----CC---HHHHHHHHhHHHHHHHHHHHhc----C--------CCeEEEEeccccccCccCccc
Confidence 799999999864321 12 2456789999999988876532 1 2469999987653211
Q ss_pred --------CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC---ChH-H---HHHHHhh---hc
Q 022386 164 --------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---APE-E---IRSKATD---YM 225 (298)
Q Consensus 164 --------~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~---~~~-~---~~~~~~~---~~ 225 (298)
.....|+.+|...+.+++. ..|+++..+.|+.+..+...... ... . ....... ..
T Consensus 138 e~~~~~~~~~~~~Y~~sK~~~E~~~~~-------~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (657)
T PRK07201 138 EDDFDEGQGLPTPYHRTKFEAEKLVRE-------ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWL 210 (657)
T ss_pred cccchhhcCCCCchHHHHHHHHHHHHH-------cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCccc
Confidence 1124699999999988863 12799999999999764321110 001 1 1111110 01
Q ss_pred c-------CCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhh
Q 022386 226 A-------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVE 283 (298)
Q Consensus 226 ~-------~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~ 283 (298)
+ ...+...+|+++++..++.. ....|+.+++.++..++ ...+.+.+.+.+.
T Consensus 211 ~~~~~~~~~~~~v~vddva~ai~~~~~~--~~~~g~~~ni~~~~~~s-----~~el~~~i~~~~g 268 (657)
T PRK07201 211 PMVGPDGGRTNIVPVDYVADALDHLMHK--DGRDGQTFHLTDPKPQR-----VGDIYNAFARAAG 268 (657)
T ss_pred ccccCCCCeeeeeeHHHHHHHHHHHhcC--cCCCCCEEEeCCCCCCc-----HHHHHHHHHHHhC
Confidence 1 11345688999999888753 23568899998776554 3344444444443
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.9e-12 Score=112.71 Aligned_cols=146 Identities=16% Similarity=0.150 Sum_probs=106.5
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l 93 (298)
++|||||+|.||.++++.|+++| +|++++|... .+..|++|.+.++++++.. ++|++
T Consensus 2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-----------------~~~~Dl~d~~~~~~~~~~~-----~~D~V 58 (299)
T PRK09987 2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST-----------------DYCGDFSNPEGVAETVRKI-----RPDVI 58 (299)
T ss_pred eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-----------------cccCCCCCHHHHHHHHHhc-----CCCEE
Confidence 69999999999999999999999 7888887631 2457999999998887742 68999
Q ss_pred EECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC-----------
Q 022386 94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA----------- 162 (298)
Q Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~----------- 162 (298)
||+|+...... ..++-+..+++|+.++.++++++... +.++|++||...+.+
T Consensus 59 ih~Aa~~~~~~----~~~~~~~~~~~N~~~~~~l~~aa~~~-------------g~~~v~~Ss~~Vy~~~~~~p~~E~~~ 121 (299)
T PRK09987 59 VNAAAHTAVDK----AESEPEFAQLLNATSVEAIAKAANEV-------------GAWVVHYSTDYVFPGTGDIPWQETDA 121 (299)
T ss_pred EECCccCCcch----hhcCHHHHHHHHHHHHHHHHHHHHHc-------------CCeEEEEccceEECCCCCCCcCCCCC
Confidence 99998643221 11123456789999999999887643 135999988543311
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCc
Q 022386 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 207 (298)
Q Consensus 163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~ 207 (298)
..+...|+.+|.+.+.+++.. . . +...+.|+++..+.
T Consensus 122 ~~P~~~Yg~sK~~~E~~~~~~----~-~---~~~ilR~~~vyGp~ 158 (299)
T PRK09987 122 TAPLNVYGETKLAGEKALQEH----C-A---KHLIFRTSWVYAGK 158 (299)
T ss_pred CCCCCHHHHHHHHHHHHHHHh----C-C---CEEEEecceecCCC
Confidence 113357999999999988754 2 1 34677788887553
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.2e-12 Score=119.47 Aligned_cols=239 Identities=13% Similarity=0.088 Sum_probs=149.9
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC---cEEEEcCChh---HHHHHHHHH---------Hh-C--------CCCeE
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA---AIAIMGRRKT---VLRSAVAAL---------HS-L--------GIPAI 64 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~---~Vv~~~r~~~---~~~~~~~~~---------~~-~--------~~~~~ 64 (298)
-++||+++||||||.||.+++..|++.+. +|+++.|... ..+++..++ .+ . ..++.
T Consensus 8 ~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~ 87 (491)
T PLN02996 8 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVT 87 (491)
T ss_pred HhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEE
Confidence 47899999999999999999999998653 4677777532 122221111 11 0 15688
Q ss_pred EEEccCCC-------HHHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q 022386 65 GLEGDVRK-------REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKK 137 (298)
Q Consensus 65 ~~~~Dls~-------~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 137 (298)
++..|+++ .+.++.+++ .+|++||+|+.... . +..+..+++|+.|+..+++++...-.
T Consensus 88 ~i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~---~----~~~~~~~~~Nv~gt~~ll~~a~~~~~- 152 (491)
T PLN02996 88 PVPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNF---D----ERYDVALGINTLGALNVLNFAKKCVK- 152 (491)
T ss_pred EEecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCC---c----CCHHHHHHHHHHHHHHHHHHHHhcCC-
Confidence 99999984 333444443 69999999986431 1 23567889999999999998764311
Q ss_pred cCCCCCCCCCCcEEEEecccccccCC---------C--------------------------------------------
Q 022386 138 GGRGQASSSSGGIIINISATLHYTAT---------W-------------------------------------------- 164 (298)
Q Consensus 138 ~~~~~~~~~~~g~iv~vss~~~~~~~---------~-------------------------------------------- 164 (298)
-.++|++||...+... +
T Consensus 153 ----------~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (491)
T PLN02996 153 ----------VKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDL 222 (491)
T ss_pred ----------CCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhh
Confidence 1358888886543110 0
Q ss_pred ---------CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc--CC-----hHHHHHHHhhhc---
Q 022386 165 ---------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK--LA-----PEEIRSKATDYM--- 225 (298)
Q Consensus 165 ---------~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~--~~-----~~~~~~~~~~~~--- 225 (298)
....|+.||++.+.+++.. . . ++.+..+.|+.|..+..... +. .......+....
T Consensus 223 ~~~~~~~~~~pn~Y~~TK~~aE~lv~~~----~-~-~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~ 296 (491)
T PLN02996 223 GMERAKLHGWPNTYVFTKAMGEMLLGNF----K-E-NLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTC 296 (491)
T ss_pred chhHHHhCCCCCchHhhHHHHHHHHHHh----c-C-CCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeE
Confidence 0124999999999999754 2 2 79999999999976542221 10 111111111111
Q ss_pred ------cCCCCCCHHHHHHHHHHhcCCCC-CCccccEEEeCCC--CCCCCCCCCchhHHHhhHHhhh
Q 022386 226 ------AAYKFGEKWDIAMAALYLASDAG-KYVNGNTLIVDGG--NWLSNPRDLPKEAVNQLSRAVE 283 (298)
Q Consensus 226 ------~~~~~~~~~dva~~~~~L~s~~~-~~~~G~~i~~dgG--~~~~~~~~~~~~~~~~~~~~~~ 283 (298)
....+...+|+++++..++.... ..-.++++++.+| ..++ ...+.+.+.....
T Consensus 297 ~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~~~~~~s-----~~ei~~~~~~~~~ 358 (491)
T PLN02996 297 FLADPNSVLDVIPADMVVNAMIVAMAAHAGGQGSEIIYHVGSSLKNPVK-----FSNLHDFAYRYFS 358 (491)
T ss_pred EecCCCeecceecccHHHHHHHHHHHHhhccCCCCcEEEecCCCCCccc-----HHHHHHHHHHHhh
Confidence 13556788999999887775421 1124678888777 3333 3444444444444
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.9e-12 Score=105.45 Aligned_cols=173 Identities=16% Similarity=0.128 Sum_probs=123.0
Q ss_pred EEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEE
Q 022386 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV 94 (298)
Q Consensus 15 ~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li 94 (298)
|+|+||||.+|+.+++.|+++|++|+++.|+.++.++ ...++.+.+|+.|++++.+.++ +.|++|
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--------~~~~~~~~~d~~d~~~~~~al~-------~~d~vi 65 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--------SPGVEIIQGDLFDPDSVKAALK-------GADAVI 65 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--------CTTEEEEESCTTCHHHHHHHHT-------TSSEEE
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--------ccccccceeeehhhhhhhhhhh-------hcchhh
Confidence 6899999999999999999999999999999876555 5679999999999988888775 799999
Q ss_pred ECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC---------
Q 022386 95 NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY--------- 165 (298)
Q Consensus 95 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~--------- 165 (298)
+++|.... + ...++.++..+++.+ -.++|++|+...+...+.
T Consensus 66 ~~~~~~~~--------~-------------~~~~~~~~~a~~~~~--------~~~~v~~s~~~~~~~~~~~~~~~~~~~ 116 (183)
T PF13460_consen 66 HAAGPPPK--------D-------------VDAAKNIIEAAKKAG--------VKRVVYLSSAGVYRDPPGLFSDEDKPI 116 (183)
T ss_dssp ECCHSTTT--------H-------------HHHHHHHHHHHHHTT--------SSEEEEEEETTGTTTCTSEEEGGTCGG
T ss_pred hhhhhhcc--------c-------------ccccccccccccccc--------cccceeeeccccCCCCCcccccccccc
Confidence 99974322 1 445566666666654 467999998876654333
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcC
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s 245 (298)
...|...|...+.+.+ ..+++...+.|+++..+.......-.+ .......+.+.+|+|++++.++.
T Consensus 117 ~~~~~~~~~~~e~~~~--------~~~~~~~ivrp~~~~~~~~~~~~~~~~------~~~~~~~~i~~~DvA~~~~~~l~ 182 (183)
T PF13460_consen 117 FPEYARDKREAEEALR--------ESGLNWTIVRPGWIYGNPSRSYRLIKE------GGPQGVNFISREDVAKAIVEALE 182 (183)
T ss_dssp GHHHHHHHHHHHHHHH--------HSTSEEEEEEESEEEBTTSSSEEEESS------TSTTSHCEEEHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHH--------hcCCCEEEEECcEeEeCCCcceeEEec------cCCCCcCcCCHHHHHHHHHHHhC
Confidence 1356666655544442 227999999999997654221100000 11112246788999999988763
|
... |
| >KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.9e-11 Score=93.06 Aligned_cols=218 Identities=17% Similarity=0.099 Sum_probs=153.6
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh--C
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF--G 88 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~--~ 88 (298)
...+++|-||-+.+|.+++.+|-++++-|.-++-...+- ...-..+..|-+=.++-+...+++-+.+ .
T Consensus 2 sagrVivYGGkGALGSacv~~FkannywV~siDl~eNe~----------Ad~sI~V~~~~swtEQe~~v~~~vg~sL~ge 71 (236)
T KOG4022|consen 2 SAGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQ----------ADSSILVDGNKSWTEQEQSVLEQVGSSLQGE 71 (236)
T ss_pred CCceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccc----------ccceEEecCCcchhHHHHHHHHHHHHhhccc
Confidence 346899999999999999999999999988877654310 0111223334333455556666665544 4
Q ss_pred CccEEEECCCCCCCCCCCCCCH-HHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 89 KLDILVNAAAGNFLVPAEDLSP-NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~-~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
++|.+++-||.+.-+.....+. ...+-++.-.+.....-.+....+++. +|.+-..+.-.+..+.|+..
T Consensus 72 kvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~----------GGLL~LtGAkaAl~gTPgMI 141 (236)
T KOG4022|consen 72 KVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKP----------GGLLQLTGAKAALGGTPGMI 141 (236)
T ss_pred ccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCC----------CceeeecccccccCCCCccc
Confidence 8999999999765544332221 223344555555555555666666654 45555566677788889999
Q ss_pred hhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 168 HVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~-~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
.|+.+|+|++.|+++++.+-. .+.|--+..|.|-..+|||.+.+.+..++ ..+...+.+++.......+
T Consensus 142 GYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~ADf----------ssWTPL~fi~e~flkWtt~ 211 (236)
T KOG4022|consen 142 GYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNADF----------SSWTPLSFISEHFLKWTTE 211 (236)
T ss_pred chhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCCcc----------cCcccHHHHHHHHHHHhcc
Confidence 999999999999999998753 45588899999999999998887765543 4466778888888877777
Q ss_pred CCCCccccEEEe
Q 022386 247 AGKYVNGNTLIV 258 (298)
Q Consensus 247 ~~~~~~G~~i~~ 258 (298)
.++.-+|..+.+
T Consensus 212 ~~RPssGsLlqi 223 (236)
T KOG4022|consen 212 TSRPSSGSLLQI 223 (236)
T ss_pred CCCCCCCceEEE
Confidence 667777887776
|
|
| >PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function | Back alignment and domain information |
|---|
Probab=99.45 E-value=1e-11 Score=106.82 Aligned_cols=185 Identities=14% Similarity=0.100 Sum_probs=148.0
Q ss_pred CcEEEEecC-CchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC--
Q 022386 12 GKVALLTGG-GSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG-- 88 (298)
Q Consensus 12 gk~~lVtG~-t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~-- 88 (298)
..+|+|.|. +.-|++.+|..|-++|+-|+++..+.++....+.+- ..++..+..|..+..++...+.+..+.+.
T Consensus 3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~---~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p 79 (299)
T PF08643_consen 3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED---RPDIRPLWLDDSDPSSIHASLSRFASLLSRP 79 (299)
T ss_pred eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc---CCCCCCcccCCCCCcchHHHHHHHHHHhcCC
Confidence 358889985 799999999999999999999999876444333322 45588888899888887777777776554
Q ss_pred ------------CccEEEECCCCC-CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEe-
Q 022386 89 ------------KLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI- 154 (298)
Q Consensus 89 ------------~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~v- 154 (298)
.+..+|...... ..++++.++.+.|...++.|+..++.+++.++|+++.+.. ...+||.+
T Consensus 80 ~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~------~~~~iil~~ 153 (299)
T PF08643_consen 80 HVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSN------QKSKIILFN 153 (299)
T ss_pred CCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC------CCceEEEEe
Confidence 355666666543 5688999999999999999999999999999999998320 13455554
Q ss_pred cccccccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCC
Q 022386 155 SATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT 206 (298)
Q Consensus 155 ss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~ 206 (298)
-|+......|..+.-.....++.+|++.|.+|+. +.+|.|..+..|.++-.
T Consensus 154 Psi~ssl~~PfhspE~~~~~al~~~~~~LrrEl~-~~~I~V~~i~LG~l~i~ 204 (299)
T PF08643_consen 154 PSISSSLNPPFHSPESIVSSALSSFFTSLRRELR-PHNIDVTQIKLGNLDIG 204 (299)
T ss_pred CchhhccCCCccCHHHHHHHHHHHHHHHHHHHhh-hcCCceEEEEeeeeccc
Confidence 5666667778888889999999999999999997 88999999999998754
|
One of the proteins P32792 from SWISSPROT has been localised to the mitochondria []. |
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=3.7e-12 Score=124.27 Aligned_cols=181 Identities=13% Similarity=0.083 Sum_probs=127.9
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l 93 (298)
+++||||+|+||.+++++|+++|++|++++|+.... + ...+.++.+|++|.+++.++++ .+|++
T Consensus 2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~---~~~v~~v~gDL~D~~~l~~al~-------~vD~V 65 (854)
T PRK05865 2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W---PSSADFIAADIRDATAVESAMT-------GADVV 65 (854)
T ss_pred EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c---ccCceEEEeeCCCHHHHHHHHh-------CCCEE
Confidence 699999999999999999999999999999874321 1 1247789999999999888775 58999
Q ss_pred EECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHHHH
Q 022386 94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAK 173 (298)
Q Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK 173 (298)
||+|+.... .+++|+.++.++++++. +.+ .+++|++||.. |
T Consensus 66 VHlAa~~~~-------------~~~vNv~GT~nLLeAa~----~~g--------vkr~V~iSS~~--------------K 106 (854)
T PRK05865 66 AHCAWVRGR-------------NDHINIDGTANVLKAMA----ETG--------TGRIVFTSSGH--------------Q 106 (854)
T ss_pred EECCCcccc-------------hHHHHHHHHHHHHHHHH----HcC--------CCeEEEECCcH--------------H
Confidence 999974321 46789999888776654 332 35799999853 7
Q ss_pred HHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhh--cc------CCCCCCHHHHHHHHHHhcC
Q 022386 174 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY--MA------AYKFGEKWDIAMAALYLAS 245 (298)
Q Consensus 174 ~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~--~~------~~~~~~~~dva~~~~~L~s 245 (298)
.+.+.+++ + +++.+..+.|+.+..+.. ..+....... .+ ...+...+|+++++..++.
T Consensus 107 ~aaE~ll~----~----~gl~~vILRp~~VYGP~~------~~~i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~ 172 (854)
T PRK05865 107 PRVEQMLA----D----CGLEWVAVRCALIFGRNV------DNWVQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALL 172 (854)
T ss_pred HHHHHHHH----H----cCCCEEEEEeceEeCCCh------HHHHHHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHh
Confidence 66666553 2 369999999999986531 1111111110 11 1136788999999988874
Q ss_pred CCCCCccccEEEeCCCCCCC
Q 022386 246 DAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 246 ~~~~~~~G~~i~~dgG~~~~ 265 (298)
... ..|..+++-+|..++
T Consensus 173 ~~~--~~ggvyNIgsg~~~S 190 (854)
T PRK05865 173 DTV--IDSGPVNLAAPGELT 190 (854)
T ss_pred CCC--cCCCeEEEECCCccc
Confidence 321 235678887776654
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.42 E-value=3.9e-12 Score=108.62 Aligned_cols=155 Identities=19% Similarity=0.190 Sum_probs=119.6
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHH---hCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH---SLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~---~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
+++||||||+|-||.+++.+|+++|+.|++++.-.....+..+-++ ..+..+.++..|++|.+.++++|+..
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~----- 76 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV----- 76 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence 6899999999999999999999999999998875443333333332 23577999999999999999999875
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC-----
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----- 163 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~----- 163 (298)
++|.++|.|+....+. +.+........|+.|++.++.....+-. ..+|+.||..-+-..
T Consensus 77 ~fd~V~Hfa~~~~vge----S~~~p~~Y~~nNi~gtlnlLe~~~~~~~------------~~~V~sssatvYG~p~~ip~ 140 (343)
T KOG1371|consen 77 KFDAVMHFAALAAVGE----SMENPLSYYHNNIAGTLNLLEVMKAHNV------------KALVFSSSATVYGLPTKVPI 140 (343)
T ss_pred CCceEEeehhhhccch----hhhCchhheehhhhhHHHHHHHHHHcCC------------ceEEEecceeeecCcceeec
Confidence 6999999999754432 2233377889999999999888776552 348888887644211
Q ss_pred -------CCchhhHHHHHHHHHHHHHHHHHh
Q 022386 164 -------WYQIHVSAAKAAVDSITRSLALEW 187 (298)
Q Consensus 164 -------~~~~~Y~~sK~a~~~l~~~la~e~ 187 (298)
.+...|+.+|.+++.+.+....-+
T Consensus 141 te~~~t~~p~~pyg~tK~~iE~i~~d~~~~~ 171 (343)
T KOG1371|consen 141 TEEDPTDQPTNPYGKTKKAIEEIIHDYNKAY 171 (343)
T ss_pred cCcCCCCCCCCcchhhhHHHHHHHHhhhccc
Confidence 145689999999999999887664
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.3e-10 Score=102.02 Aligned_cols=194 Identities=16% Similarity=0.110 Sum_probs=119.2
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
+++|||||+|.||.+++++|+++|++|++.. .|+.+.+.+...++. .++|+
T Consensus 10 ~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~------------------------~~~~~~~~v~~~l~~-----~~~D~ 60 (298)
T PLN02778 10 LKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS------------------------GRLENRASLEADIDA-----VKPTH 60 (298)
T ss_pred CeEEEECCCCHHHHHHHHHHHhCCCEEEEec------------------------CccCCHHHHHHHHHh-----cCCCE
Confidence 5799999999999999999999999886432 245555555555443 26899
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc--c----------
Q 022386 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH--Y---------- 160 (298)
Q Consensus 93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~--~---------- 160 (298)
+||+|+....... +...+.-.+.+++|+.++.++++++...- -+.+++||... .
T Consensus 61 ViH~Aa~~~~~~~-~~~~~~p~~~~~~Nv~gt~~ll~aa~~~g-------------v~~v~~sS~~vy~~~~~~p~~~~~ 126 (298)
T PLN02778 61 VFNAAGVTGRPNV-DWCESHKVETIRANVVGTLTLADVCRERG-------------LVLTNYATGCIFEYDDAHPLGSGI 126 (298)
T ss_pred EEECCcccCCCCc-hhhhhCHHHHHHHHHHHHHHHHHHHHHhC-------------CCEEEEecceEeCCCCCCCcccCC
Confidence 9999996532111 11113346788999999999999987531 11444443221 1
Q ss_pred --c----CCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhcc---C-CCC
Q 022386 161 --T----ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA---A-YKF 230 (298)
Q Consensus 161 --~----~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~---~-~~~ 230 (298)
. +.+....|+.||.+.+.+++.++.. .++|+ ++...+.. .....+...+....+ . ..+
T Consensus 127 ~~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~~~----~~lr~-----~~~~~~~~---~~~~~fi~~~~~~~~~~~~~~s~ 194 (298)
T PLN02778 127 GFKEEDTPNFTGSFYSKTKAMVEELLKNYENV----CTLRV-----RMPISSDL---SNPRNFITKITRYEKVVNIPNSM 194 (298)
T ss_pred CCCcCCCCCCCCCchHHHHHHHHHHHHHhhcc----EEeee-----cccCCccc---ccHHHHHHHHHcCCCeeEcCCCC
Confidence 0 0112357999999999999886433 24554 22111100 011123333332211 1 236
Q ss_pred CCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 231 GEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 231 ~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
...+|++++++.++... .+| .+++.++..++
T Consensus 195 ~yv~D~v~al~~~l~~~---~~g-~yNigs~~~iS 225 (298)
T PLN02778 195 TILDELLPISIEMAKRN---LTG-IYNFTNPGVVS 225 (298)
T ss_pred EEHHHHHHHHHHHHhCC---CCC-eEEeCCCCccc
Confidence 68889999998888532 234 88987776554
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.34 E-value=6.4e-11 Score=104.52 Aligned_cols=225 Identities=15% Similarity=0.084 Sum_probs=146.4
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcC--CcEEEEcCChhHHHHHHHHHHh-CCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G--~~Vv~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.++.+++||||+|.+|++++.+|.+++ ..+.+++..... ....++... ...++..+.+|+.+..++.+.+.
T Consensus 2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~-~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~----- 75 (361)
T KOG1430|consen 2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQ-SNLPAELTGFRSGRVTVILGDLLDANSISNAFQ----- 75 (361)
T ss_pred CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccc-cccchhhhcccCCceeEEecchhhhhhhhhhcc-----
Confidence 457899999999999999999999998 688888887531 111111111 35678899999999999998876
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc-----
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT----- 161 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~----- 161 (298)
.. .+||+|....+. ....+-+..+++|+.|+.++++++...-. .++|+.||..-..
T Consensus 76 --~~-~Vvh~aa~~~~~----~~~~~~~~~~~vNV~gT~nvi~~c~~~~v------------~~lIYtSs~~Vvf~g~~~ 136 (361)
T KOG1430|consen 76 --GA-VVVHCAASPVPD----FVENDRDLAMRVNVNGTLNVIEACKELGV------------KRLIYTSSAYVVFGGEPI 136 (361)
T ss_pred --Cc-eEEEeccccCcc----ccccchhhheeecchhHHHHHHHHHHhCC------------CEEEEecCceEEeCCeec
Confidence 55 677777643221 22224567899999999999888876543 4588888866332
Q ss_pred -------CCCC--chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhc-------
Q 022386 162 -------ATWY--QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM------- 225 (298)
Q Consensus 162 -------~~~~--~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~------- 225 (298)
++|. ...|+.||+--+.+++.... ..+....++.|-.|..|.-.... +...+.+....
T Consensus 137 ~n~~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~----~~~l~T~aLR~~~IYGpgd~~~~--~~i~~~~~~g~~~f~~g~ 210 (361)
T KOG1430|consen 137 INGDESLPYPLKHIDPYGESKALAEKLVLEANG----SDDLYTCALRPPGIYGPGDKRLL--PKIVEALKNGGFLFKIGD 210 (361)
T ss_pred ccCCCCCCCccccccccchHHHHHHHHHHHhcC----CCCeeEEEEccccccCCCCcccc--HHHHHHHHccCceEEeec
Confidence 1222 24899999999999987743 23589999999999876432222 22222221111
Q ss_pred --cCCCCCCHHHHHHH--H-HHhcCCCCCCccccEEEeCCCCCCC
Q 022386 226 --AAYKFGEKWDIAMA--A-LYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 226 --~~~~~~~~~dva~~--~-~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
....+...+-++.+ + ..-+.+.+...+||.+.|..|..+.
T Consensus 211 ~~~~~~~~~~~Nva~ahilA~~aL~~~~~~~~Gq~yfI~d~~p~~ 255 (361)
T KOG1430|consen 211 GENLNDFTYGENVAWAHILAARALLDKSPSVNGQFYFITDDTPVR 255 (361)
T ss_pred cccccceEEechhHHHHHHHHHHHHhcCCccCceEEEEeCCCcch
Confidence 11112222222222 1 1122225677899999998886654
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.1e-11 Score=104.40 Aligned_cols=159 Identities=19% Similarity=0.161 Sum_probs=98.9
Q ss_pred EecCCchhHHHHHHHHHHcCC--cEEEEcCChhH---HHHHHHHHHh----------CCCCeEEEEccCCCHH------H
Q 022386 17 LTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTV---LRSAVAALHS----------LGIPAIGLEGDVRKRE------D 75 (298)
Q Consensus 17 VtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~---~~~~~~~~~~----------~~~~~~~~~~Dls~~~------~ 75 (298)
||||||.||.++..+|++++. +|+++.|..+. .+++.+.+.+ ...++.++..|++++. +
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999987 89999997532 2333222211 2568999999999853 3
Q ss_pred HHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEec
Q 022386 76 AVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS 155 (298)
Q Consensus 76 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vs 155 (298)
.+.+.+ .+|++||+|+..... ..+.+..++|+.|+..+++.+...- ..+++++|
T Consensus 81 ~~~L~~-------~v~~IiH~Aa~v~~~-------~~~~~~~~~NV~gt~~ll~la~~~~------------~~~~~~iS 134 (249)
T PF07993_consen 81 YQELAE-------EVDVIIHCAASVNFN-------APYSELRAVNVDGTRNLLRLAAQGK------------RKRFHYIS 134 (249)
T ss_dssp HHHHHH-------H--EEEE--SS-SBS--------S--EEHHHHHHHHHHHHHHHTSSS---------------EEEEE
T ss_pred hhcccc-------ccceeeecchhhhhc-------ccchhhhhhHHHHHHHHHHHHHhcc------------CcceEEec
Confidence 333332 699999999854321 1344577899999999999887211 23599999
Q ss_pred ccccc--cCC------------------CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccC
Q 022386 156 ATLHY--TAT------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD 205 (298)
Q Consensus 156 s~~~~--~~~------------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t 205 (298)
|.... ... .....|..||...+.+++..+.+. |+.+..+.||.+..
T Consensus 135 Ta~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~----g~p~~I~Rp~~i~g 200 (249)
T PF07993_consen 135 TAYVAGSRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRH----GLPVTIYRPGIIVG 200 (249)
T ss_dssp EGGGTTS-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH-------EEEEEE-EEE-
T ss_pred cccccCCCCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcC----CceEEEEecCcccc
Confidence 83211 110 123589999999999999998774 58999999999975
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.32 E-value=2.2e-11 Score=106.32 Aligned_cols=200 Identities=15% Similarity=0.079 Sum_probs=126.4
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
+++||||++|-||.++.+.|.++|+.|+.++|. .+|++|.+++.++++.. ++|+
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~---------------------~~dl~d~~~~~~~~~~~-----~pd~ 54 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRS---------------------DLDLTDPEAVAKLLEAF-----KPDV 54 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT---------------------CS-TTSHHHHHHHHHHH-------SE
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch---------------------hcCCCCHHHHHHHHHHh-----CCCe
Confidence 479999999999999999999999999999776 57999999999999876 6999
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC---------
Q 022386 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--------- 163 (298)
Q Consensus 93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~--------- 163 (298)
+||+|+..... .-...-+..+++|+.++..+.+.+... +.++|++||..-+.+.
T Consensus 55 Vin~aa~~~~~----~ce~~p~~a~~iN~~~~~~la~~~~~~-------------~~~li~~STd~VFdG~~~~~y~E~d 117 (286)
T PF04321_consen 55 VINCAAYTNVD----ACEKNPEEAYAINVDATKNLAEACKER-------------GARLIHISTDYVFDGDKGGPYTEDD 117 (286)
T ss_dssp EEE------HH----HHHHSHHHHHHHHTHHHHHHHHHHHHC-------------T-EEEEEEEGGGS-SSTSSSB-TTS
T ss_pred EeccceeecHH----hhhhChhhhHHHhhHHHHHHHHHHHHc-------------CCcEEEeeccEEEcCCcccccccCC
Confidence 99999863211 011334568899999999988888732 3569999997554332
Q ss_pred --CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhcc-------CCCCCCHH
Q 022386 164 --WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA-------AYKFGEKW 234 (298)
Q Consensus 164 --~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ 234 (298)
.+...|+.+|...+..++.. . + +...+.++++..+. ....-..+...+....+ .......+
T Consensus 118 ~~~P~~~YG~~K~~~E~~v~~~----~-~---~~~IlR~~~~~g~~--~~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~ 187 (286)
T PF04321_consen 118 PPNPLNVYGRSKLEGEQAVRAA----C-P---NALILRTSWVYGPS--GRNFLRWLLRRLRQGEPIKLFDDQYRSPTYVD 187 (286)
T ss_dssp ----SSHHHHHHHHHHHHHHHH------S---SEEEEEE-SEESSS--SSSHHHHHHHHHHCTSEEEEESSCEE--EEHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHh----c-C---CEEEEecceecccC--CCchhhhHHHHHhcCCeeEeeCCceeCCEEHH
Confidence 12468999999999988873 1 2 55667777776541 11111222232222111 12355788
Q ss_pred HHHHHHHHhcCCC-CCCccccEEEeCCCCCCC
Q 022386 235 DIAMAALYLASDA-GKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 235 dva~~~~~L~s~~-~~~~~G~~i~~dgG~~~~ 265 (298)
|+|+.+..|+... .+.-...++++.|...++
T Consensus 188 dlA~~i~~l~~~~~~~~~~~Giyh~~~~~~~S 219 (286)
T PF04321_consen 188 DLARVILELIEKNLSGASPWGIYHLSGPERVS 219 (286)
T ss_dssp HHHHHHHHHHHHHHH-GGG-EEEE---BS-EE
T ss_pred HHHHHHHHHHHhcccccccceeEEEecCcccC
Confidence 9999999999642 112224588888876665
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.31 E-value=5.1e-10 Score=117.47 Aligned_cols=225 Identities=12% Similarity=0.046 Sum_probs=141.9
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcC----CcEEEEcCChhHH---HHHHHHHHhC-------CCCeEEEEccCCCHHH--
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHG----AAIAIMGRRKTVL---RSAVAALHSL-------GIPAIGLEGDVRKRED-- 75 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G----~~Vv~~~r~~~~~---~~~~~~~~~~-------~~~~~~~~~Dls~~~~-- 75 (298)
.++++|||++|.||.++++.|+++| .+|+.+.|+.... +.+...+... ..++.++.+|++++.-
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence 5799999999999999999999987 6788888874322 2222222221 1368899999985410
Q ss_pred HHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEec
Q 022386 76 AVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS 155 (298)
Q Consensus 76 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vs 155 (298)
-...++++. ..+|++||+|+.... ..+ +......|+.++..+++.+... + ..+++++|
T Consensus 1051 ~~~~~~~l~---~~~d~iiH~Aa~~~~----~~~---~~~~~~~nv~gt~~ll~~a~~~----~--------~~~~v~vS 1108 (1389)
T TIGR03443 1051 SDEKWSDLT---NEVDVIIHNGALVHW----VYP---YSKLRDANVIGTINVLNLCAEG----K--------AKQFSFVS 1108 (1389)
T ss_pred CHHHHHHHH---hcCCEEEECCcEecC----ccC---HHHHHHhHHHHHHHHHHHHHhC----C--------CceEEEEe
Confidence 011122222 379999999985431 112 3334567999999999877532 1 24599999
Q ss_pred ccccccC-----------------C-----------CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCc
Q 022386 156 ATLHYTA-----------------T-----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 207 (298)
Q Consensus 156 s~~~~~~-----------------~-----------~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~ 207 (298)
|...+.. . .....|+.||.+.+.+++..+. .|+++..+.||.|..+.
T Consensus 1109 S~~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~-----~g~~~~i~Rpg~v~G~~ 1183 (1389)
T TIGR03443 1109 STSALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK-----RGLRGCIVRPGYVTGDS 1183 (1389)
T ss_pred CeeecCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh-----CCCCEEEECCCccccCC
Confidence 8644311 0 0124599999999999886532 27999999999997654
Q ss_pred ccCcCChHHHHHHHhh------hcc----CCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCC
Q 022386 208 GVSKLAPEEIRSKATD------YMA----AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW 263 (298)
Q Consensus 208 ~~~~~~~~~~~~~~~~------~~~----~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~ 263 (298)
........++...... ..+ ...+...++++++++.++........+.++++.++..
T Consensus 1184 ~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~ 1249 (1389)
T TIGR03443 1184 KTGATNTDDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPR 1249 (1389)
T ss_pred CcCCCCchhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCC
Confidence 3332222233222211 111 2346678999999998875432223345677766644
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.2e-09 Score=93.21 Aligned_cols=190 Identities=18% Similarity=0.153 Sum_probs=130.4
Q ss_pred EEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEE
Q 022386 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV 94 (298)
Q Consensus 15 ~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li 94 (298)
+||||++|-+|.++++.|. .+..|+.+++.. +|++|.+.+.+++++. ++|++|
T Consensus 3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~---------------------~Ditd~~~v~~~i~~~-----~PDvVI 55 (281)
T COG1091 3 ILITGANGQLGTELRRALP-GEFEVIATDRAE---------------------LDITDPDAVLEVIRET-----RPDVVI 55 (281)
T ss_pred EEEEcCCChHHHHHHHHhC-CCceEEeccCcc---------------------ccccChHHHHHHHHhh-----CCCEEE
Confidence 9999999999999999998 667899888864 7999999999999976 799999
Q ss_pred ECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC-----------
Q 022386 95 NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----------- 163 (298)
Q Consensus 95 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~----------- 163 (298)
|+|+.......+ .+-+.-+.+|..++.++.+++... +..+|++|+---+.+.
T Consensus 56 n~AAyt~vD~aE----~~~e~A~~vNa~~~~~lA~aa~~~-------------ga~lVhiSTDyVFDG~~~~~Y~E~D~~ 118 (281)
T COG1091 56 NAAAYTAVDKAE----SEPELAFAVNATGAENLARAAAEV-------------GARLVHISTDYVFDGEKGGPYKETDTP 118 (281)
T ss_pred ECcccccccccc----CCHHHHHHhHHHHHHHHHHHHHHh-------------CCeEEEeecceEecCCCCCCCCCCCCC
Confidence 999975433222 234678999999999999988743 3559999864433322
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhc-------cCCCCCCHHHH
Q 022386 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM-------AAYKFGEKWDI 236 (298)
Q Consensus 164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~dv 236 (298)
.+...|+.||.+-+..++... + +...|...++..... ......+........ ..+......|+
T Consensus 119 ~P~nvYG~sKl~GE~~v~~~~-----~---~~~I~Rtswv~g~~g--~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dl 188 (281)
T COG1091 119 NPLNVYGRSKLAGEEAVRAAG-----P---RHLILRTSWVYGEYG--NNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDL 188 (281)
T ss_pred CChhhhhHHHHHHHHHHHHhC-----C---CEEEEEeeeeecCCC--CCHHHHHHHHhhcCCceEEECCeeeCCccHHHH
Confidence 245689999999999998763 2 233344444543321 111112222222221 22446688899
Q ss_pred HHHHHHhcCCCCCCccccEEEeCCC
Q 022386 237 AMAALYLASDAGKYVNGNTLIVDGG 261 (298)
Q Consensus 237 a~~~~~L~s~~~~~~~G~~i~~dgG 261 (298)
|.++..|+..... +.++++.+.
T Consensus 189 A~~i~~ll~~~~~---~~~yH~~~~ 210 (281)
T COG1091 189 ADAILELLEKEKE---GGVYHLVNS 210 (281)
T ss_pred HHHHHHHHhcccc---CcEEEEeCC
Confidence 9999998865432 225555444
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.1e-10 Score=108.59 Aligned_cols=253 Identities=15% Similarity=0.111 Sum_probs=148.9
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC---cEEEEcCChh---HHHHHHHHH---------HhC---------CCCeE
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA---AIAIMGRRKT---VLRSAVAAL---------HSL---------GIPAI 64 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~---~Vv~~~r~~~---~~~~~~~~~---------~~~---------~~~~~ 64 (298)
-++||+++||||||.||..++++|++.+. +|+++.|... ..+++..++ .+. ..++.
T Consensus 116 f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~ 195 (605)
T PLN02503 116 FLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLV 195 (605)
T ss_pred hhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEE
Confidence 46799999999999999999999998764 5788877532 222222222 111 24688
Q ss_pred EEEccCCCH------HHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q 022386 65 GLEGDVRKR------EDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKG 138 (298)
Q Consensus 65 ~~~~Dls~~------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 138 (298)
++..|++++ +..+.+.+ .+|++||+|+.... .+..+..+++|+.++.++++.+...-.
T Consensus 196 ~v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~f-------~~~~~~a~~vNV~GT~nLLelA~~~~~-- 259 (605)
T PLN02503 196 PVVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTTF-------DERYDVAIDINTRGPCHLMSFAKKCKK-- 259 (605)
T ss_pred EEEeeCCCcccCCCHHHHHHHHh-------cCCEEEECcccccc-------ccCHHHHHHHHHHHHHHHHHHHHHcCC--
Confidence 899999986 23333322 69999999986431 134677899999999999998764321
Q ss_pred CCCCCCCCCCcEEEEecccccccC---------CC---------------------------------------------
Q 022386 139 GRGQASSSSGGIIINISATLHYTA---------TW--------------------------------------------- 164 (298)
Q Consensus 139 ~~~~~~~~~~g~iv~vss~~~~~~---------~~--------------------------------------------- 164 (298)
-.++|++|+...+.. ++
T Consensus 260 ---------lk~fV~vSTayVyG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~ 330 (605)
T PLN02503 260 ---------LKLFLQVSTAYVNGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFA 330 (605)
T ss_pred ---------CCeEEEccCceeecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHH
Confidence 123777766432211 11
Q ss_pred ---------------CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcc---cCcCCh----HHHHHHHh
Q 022386 165 ---------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG---VSKLAP----EEIRSKAT 222 (298)
Q Consensus 165 ---------------~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~---~~~~~~----~~~~~~~~ 222 (298)
-...|.-+|+..+.+++.. ..++.+..+.|..|.+... ..+... ........
T Consensus 331 ~~l~~~g~~~~~~~~~pNtYt~TK~lAE~lV~~~------~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g 404 (605)
T PLN02503 331 QKMKDLGLERAKLYGWQDTYVFTKAMGEMVINSM------RGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYG 404 (605)
T ss_pred HHhhhcccchhhhCCCCChHHHHHHHHHHHHHHh------cCCCCEEEEcCCEecccccCCccccccCccccchhhhhee
Confidence 0135777777777777632 2368999999999843211 011000 00000111
Q ss_pred hh---------ccCCCCCCHHHHHHHHHHhcCC-C-CCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhhhccCCCCC
Q 022386 223 DY---------MAAYKFGEKWDIAMAALYLASD-A-GKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKSRDSPV 291 (298)
Q Consensus 223 ~~---------~~~~~~~~~~dva~~~~~L~s~-~-~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (298)
.. ...-.....+.+++++...+.. . .....++++++..+.. ....+..+.+.+.++..+-+..+..
T Consensus 405 ~G~lr~~~~~~~~~~DiVPVD~vvna~i~a~a~~~~~~~~~~~vYn~ts~~~---nP~t~~~~~~~~~~~~~~~P~~~~~ 481 (605)
T PLN02503 405 KGQLTGFLADPNGVLDVVPADMVVNATLAAMAKHGGAAKPEINVYQIASSVV---NPLVFQDLARLLYEHYKSSPYMDSK 481 (605)
T ss_pred ccceeEEEeCCCeeEeEEeecHHHHHHHHHHHhhhcccCCCCCEEEeCCCCC---CCeEHHHHHHHHHHHHhhCCccccc
Confidence 10 0111244666788887766321 1 1123588999976611 1223566666666666665555545
Q ss_pred CCCC
Q 022386 292 GIPK 295 (298)
Q Consensus 292 ~~~~ 295 (298)
|+|.
T Consensus 482 ~~~~ 485 (605)
T PLN02503 482 GRPI 485 (605)
T ss_pred Ccce
Confidence 5553
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=7.7e-10 Score=89.38 Aligned_cols=84 Identities=24% Similarity=0.283 Sum_probs=72.0
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
++++||||+ |+|.++++.|+++|++|++++|+.+..+.+...+.. ..++.++.+|++|+++++++++.+.+.++++|+
T Consensus 1 m~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~-~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~ 78 (177)
T PRK08309 1 MHALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT-PESITPLPLDYHDDDALKLAIKSTIEKNGPFDL 78 (177)
T ss_pred CEEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc-CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeE
Confidence 369999998 677789999999999999999997766666554543 456888999999999999999999999999999
Q ss_pred EEECCC
Q 022386 93 LVNAAA 98 (298)
Q Consensus 93 li~~ag 98 (298)
+|+...
T Consensus 79 lv~~vh 84 (177)
T PRK08309 79 AVAWIH 84 (177)
T ss_pred EEEecc
Confidence 998875
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=7.9e-10 Score=106.04 Aligned_cols=187 Identities=11% Similarity=0.003 Sum_probs=120.9
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l 93 (298)
++|||||+|.||.+++++|+++|++|++++|+... . ....+.++.+|+++.. +.+++ .++|++
T Consensus 2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~-------~--~~~~ve~v~~Dl~d~~-l~~al-------~~~D~V 64 (699)
T PRK12320 2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHD-------A--LDPRVDYVCASLRNPV-LQELA-------GEADAV 64 (699)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhh-------c--ccCCceEEEccCCCHH-HHHHh-------cCCCEE
Confidence 69999999999999999999999999999986431 1 1235788999999873 43333 368999
Q ss_pred EECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHHHH
Q 022386 94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAK 173 (298)
Q Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK 173 (298)
||+|+.... . ..++|+.++.++++++.. . +.++|++||..+ .+. .|.
T Consensus 65 IHLAa~~~~------~------~~~vNv~Gt~nLleAA~~----~---------GvRiV~~SS~~G---~~~--~~~--- 111 (699)
T PRK12320 65 IHLAPVDTS------A------PGGVGITGLAHVANAAAR----A---------GARLLFVSQAAG---RPE--LYR--- 111 (699)
T ss_pred EEcCccCcc------c------hhhHHHHHHHHHHHHHHH----c---------CCeEEEEECCCC---CCc--ccc---
Confidence 999985321 1 124789999998887742 2 235999987632 111 122
Q ss_pred HHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCC---CCCHHHHHHHHHHhcCCCCCC
Q 022386 174 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK---FGEKWDIAMAALYLASDAGKY 250 (298)
Q Consensus 174 ~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~dva~~~~~L~s~~~~~ 250 (298)
..+.++ . ..++.+..+.|+.+..+..... ...+...+........ +...+|++++++.++...
T Consensus 112 -~aE~ll----~----~~~~p~~ILR~~nVYGp~~~~~--~~r~I~~~l~~~~~~~pI~vIyVdDvv~alv~al~~~--- 177 (699)
T PRK12320 112 -QAETLV----S----TGWAPSLVIRIAPPVGRQLDWM--VCRTVATLLRSKVSARPIRVLHLDDLVRFLVLALNTD--- 177 (699)
T ss_pred -HHHHHH----H----hcCCCEEEEeCceecCCCCccc--HhHHHHHHHHHHHcCCceEEEEHHHHHHHHHHHHhCC---
Confidence 122221 1 2257888999998887632211 1122222221111122 248899999998888542
Q ss_pred ccccEEEeCCCCCCC
Q 022386 251 VNGNTLIVDGGNWLS 265 (298)
Q Consensus 251 ~~G~~i~~dgG~~~~ 265 (298)
.+| ++++.+|..++
T Consensus 178 ~~G-iyNIG~~~~~S 191 (699)
T PRK12320 178 RNG-VVDLATPDTTN 191 (699)
T ss_pred CCC-EEEEeCCCeeE
Confidence 235 89998887775
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.25 E-value=5e-10 Score=97.75 Aligned_cols=211 Identities=17% Similarity=0.089 Sum_probs=126.7
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC-ccE
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK-LDI 92 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~-id~ 92 (298)
+++||||||.+|.+++++|+++|++|.++.|+.+... ...+..+.+|+.|++++..+++.. +.+.. +|.
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~---------~~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~d~ 70 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA---------GPNEKHVKFDWLDEDTWDNPFSSD-DGMEPEISA 70 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc---------CCCCccccccCCCHHHHHHHHhcc-cCcCCceeE
Confidence 4899999999999999999999999999999875321 123556788999999999988643 22335 899
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHHH
Q 022386 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 172 (298)
Q Consensus 93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~s 172 (298)
++++++... . ... ..+.++..+++.+ -.+||++|+.....+.+ .
T Consensus 71 v~~~~~~~~-------~--~~~------------~~~~~i~aa~~~g--------v~~~V~~Ss~~~~~~~~-------~ 114 (285)
T TIGR03649 71 VYLVAPPIP-------D--LAP------------PMIKFIDFARSKG--------VRRFVLLSASIIEKGGP-------A 114 (285)
T ss_pred EEEeCCCCC-------C--hhH------------HHHHHHHHHHHcC--------CCEEEEeeccccCCCCc-------h
Confidence 999876311 1 000 1123444454443 35799998864432211 1
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHH--H--hhhccCCCCCCHHHHHHHHHHhcCCCC
Q 022386 173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK--A--TDYMAAYKFGEKWDIAMAALYLASDAG 248 (298)
Q Consensus 173 K~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~dva~~~~~L~s~~~ 248 (298)
+...+.+.+ + ..|+....+.|+++.......... ...... + ........+.+.+|+|+++..++..+.
T Consensus 115 ~~~~~~~l~----~---~~gi~~tilRp~~f~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~ 186 (285)
T TIGR03649 115 MGQVHAHLD----S---LGGVEYTVLRPTWFMENFSEEFHV-EAIRKENKIYSATGDGKIPFVSADDIARVAYRALTDKV 186 (285)
T ss_pred HHHHHHHHH----h---ccCCCEEEEeccHHhhhhcccccc-cccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCCC
Confidence 222222111 1 127999999999876432111000 000000 0 001112347799999999998887532
Q ss_pred CCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhhhc
Q 022386 249 KYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERK 285 (298)
Q Consensus 249 ~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~~~ 285 (298)
..|..+++.|+..++ ...+.+.+.+.+.++
T Consensus 187 --~~~~~~~l~g~~~~s-----~~eia~~l~~~~g~~ 216 (285)
T TIGR03649 187 --APNTDYVVLGPELLT-----YDDVAEILSRVLGRK 216 (285)
T ss_pred --cCCCeEEeeCCccCC-----HHHHHHHHHHHhCCc
Confidence 235667776765554 455555555555443
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.25 E-value=3.7e-10 Score=94.69 Aligned_cols=236 Identities=17% Similarity=0.179 Sum_probs=131.5
Q ss_pred EEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEE
Q 022386 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV 94 (298)
Q Consensus 15 ~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li 94 (298)
++||||||.||++++..|.+.|+.|+++.|+......... ..+...+.+....+ ..+|++|
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~-------------~~v~~~~~~~~~~~------~~~DavI 61 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH-------------PNVTLWEGLADALT------LGIDAVI 61 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC-------------ccccccchhhhccc------CCCCEEE
Confidence 5899999999999999999999999999999764322110 01111122222211 1799999
Q ss_pred ECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHHH--
Q 022386 95 NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA-- 172 (298)
Q Consensus 95 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~s-- 172 (298)
|.||..-....+ +.+.=+.. ..+.+..++.+...+.+... +.++..-+|..++++......|.-.
T Consensus 62 NLAG~~I~~rrW--t~~~K~~i----~~SRi~~T~~L~e~I~~~~~-------~P~~~isaSAvGyYG~~~~~~~tE~~~ 128 (297)
T COG1090 62 NLAGEPIAERRW--TEKQKEEI----RQSRINTTEKLVELIAASET-------KPKVLISASAVGYYGHSGDRVVTEESP 128 (297)
T ss_pred ECCCCccccccC--CHHHHHHH----HHHHhHHHHHHHHHHHhccC-------CCcEEEecceEEEecCCCceeeecCCC
Confidence 999954332222 22222233 34666777777777765432 3444444566666665332222111
Q ss_pred --HHHHHHHHHHHHHHhc--CCCCeEEEEEeCCcccCCcccC--cCChHHHHH----HHhhhccCCCCCCHHHHHHHHHH
Q 022386 173 --KAAVDSITRSLALEWG--TDYAIRVNGIAPGPIKDTAGVS--KLAPEEIRS----KATDYMAAYKFGEKWDIAMAALY 242 (298)
Q Consensus 173 --K~a~~~l~~~la~e~~--~~~girv~~i~PG~v~t~~~~~--~~~~~~~~~----~~~~~~~~~~~~~~~dva~~~~~ 242 (298)
.-.+..+++.+-.+.. ...|+||+.+.-|.|-.+..-. .+. +.+.- ++......-.|...+|+++++.|
T Consensus 129 ~g~~Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~-~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~f 207 (297)
T COG1090 129 PGDDFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKML-PLFKLGLGGKLGSGRQWFSWIHIEDLVNAILF 207 (297)
T ss_pred CCCChHHHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhc-chhhhccCCccCCCCceeeeeeHHHHHHHHHH
Confidence 1223333333322211 2458999999999997643211 111 11111 11112222347789999999999
Q ss_pred hcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhhhccCCCCCCCC
Q 022386 243 LASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKSRDSPVGIP 294 (298)
Q Consensus 243 L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (298)
++.+. .++|. +++..-..+ ..+...+.+.+.+.| |.+++.|
T Consensus 208 ll~~~--~lsGp-~N~taP~PV-----~~~~F~~al~r~l~R---P~~~~vP 248 (297)
T COG1090 208 LLENE--QLSGP-FNLTAPNPV-----RNKEFAHALGRALHR---PAILPVP 248 (297)
T ss_pred HHhCc--CCCCc-ccccCCCcC-----cHHHHHHHHHHHhCC---CccccCc
Confidence 99753 35553 344444333 356667777776664 4444444
|
|
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.4e-10 Score=95.77 Aligned_cols=224 Identities=14% Similarity=0.084 Sum_probs=155.5
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHc--CCcEEEEcCC---hhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKH--GAAIAIMGRR---KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~--G~~Vv~~~r~---~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
..+.++||||.+.||...+..+... .++.+.++.- +. ...+++. ....+.+|+..|+.++..+.-++.+
T Consensus 5 ~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~--~~~l~~~-~n~p~ykfv~~di~~~~~~~~~~~~--- 78 (331)
T KOG0747|consen 5 KEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN--LKNLEPV-RNSPNYKFVEGDIADADLVLYLFET--- 78 (331)
T ss_pred ccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc--cchhhhh-ccCCCceEeeccccchHHHHhhhcc---
Confidence 4489999999999999999999876 4455544332 11 2222222 2346789999999999988887763
Q ss_pred HhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC---
Q 022386 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA--- 162 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~--- 162 (298)
..+|.+||.|........ -.+--+..+.|++++..|+++....... -++|++|+-.-+-.
T Consensus 79 --~~id~vihfaa~t~vd~s----~~~~~~~~~nnil~t~~Lle~~~~sg~i-----------~~fvhvSTdeVYGds~~ 141 (331)
T KOG0747|consen 79 --EEIDTVIHFAAQTHVDRS----FGDSFEFTKNNILSTHVLLEAVRVSGNI-----------RRFVHVSTDEVYGDSDE 141 (331)
T ss_pred --CchhhhhhhHhhhhhhhh----cCchHHHhcCCchhhhhHHHHHHhccCe-----------eEEEEecccceecCccc
Confidence 589999999986433211 1122456789999999999999877643 44999988543311
Q ss_pred ---------CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHh---------hh
Q 022386 163 ---------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT---------DY 224 (298)
Q Consensus 163 ---------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~---------~~ 224 (298)
..+...|+++|+|.+++++++.+.+ |+.+..+.-+.|..|.+.....-+.+..... +.
T Consensus 142 ~~~~~E~s~~nPtnpyAasKaAaE~~v~Sy~~sy----~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g 217 (331)
T KOG0747|consen 142 DAVVGEASLLNPTNPYAASKAAAEMLVRSYGRSY----GLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDG 217 (331)
T ss_pred cccccccccCCCCCchHHHHHHHHHHHHHHhhcc----CCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCc
Confidence 1245689999999999999998876 5899999999999886554433333333221 22
Q ss_pred ccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCC
Q 022386 225 MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 225 ~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
...+.+...+|+++++...+.... .|+++++.-.+.+
T Consensus 218 ~~~rs~l~veD~~ea~~~v~~Kg~---~geIYNIgtd~e~ 254 (331)
T KOG0747|consen 218 LQTRSYLYVEDVSEAFKAVLEKGE---LGEIYNIGTDDEM 254 (331)
T ss_pred ccceeeEeHHHHHHHHHHHHhcCC---ccceeeccCcchh
Confidence 233456688999999877775421 4899998665544
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.9e-10 Score=105.74 Aligned_cols=157 Identities=18% Similarity=0.242 Sum_probs=114.9
Q ss_pred EecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEEC
Q 022386 17 LTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNA 96 (298)
Q Consensus 17 VtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~ 96 (298)
|+||++|+|.++++.|...|++|+...+...+. ......+++.+|+.
T Consensus 43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~---------------------------------~~~~~~~~~~~~~d 89 (450)
T PRK08261 43 LVGGAGRLAEALAALLAGLGYDVVANNDGGLTW---------------------------------AAGWGDRFGALVFD 89 (450)
T ss_pred EEccCchhHHHHHHHHhhCCCeeeecCcccccc---------------------------------ccCcCCcccEEEEE
Confidence 888899999999999999999999876654300 00001244444443
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHHHHHHH
Q 022386 97 AAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 176 (298)
Q Consensus 97 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~ 176 (298)
+... .+.+++ .+.+.+.+.+++.|.. +|+||++++..... ....|+++|+++
T Consensus 90 ~~~~-------~~~~~l--------~~~~~~~~~~l~~l~~----------~griv~i~s~~~~~---~~~~~~~akaal 141 (450)
T PRK08261 90 ATGI-------TDPADL--------KALYEFFHPVLRSLAP----------CGRVVVLGRPPEAA---ADPAAAAAQRAL 141 (450)
T ss_pred CCCC-------CCHHHH--------HHHHHHHHHHHHhccC----------CCEEEEEccccccC---CchHHHHHHHHH
Confidence 3211 122222 2445667777777753 58899999977653 345699999999
Q ss_pred HHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCCCCccccEE
Q 022386 177 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTL 256 (298)
Q Consensus 177 ~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i 256 (298)
.+++++++.|+ +.+|+++.|.|+. ..+++++..+.|++++.+.+++|+.+
T Consensus 142 ~gl~rsla~E~--~~gi~v~~i~~~~----------------------------~~~~~~~~~~~~l~s~~~a~~~g~~i 191 (450)
T PRK08261 142 EGFTRSLGKEL--RRGATAQLVYVAP----------------------------GAEAGLESTLRFFLSPRSAYVSGQVV 191 (450)
T ss_pred HHHHHHHHHHh--hcCCEEEEEecCC----------------------------CCHHHHHHHHHHhcCCccCCccCcEE
Confidence 99999999999 4589999998874 24568888999999998999999999
Q ss_pred EeCCCCCC
Q 022386 257 IVDGGNWL 264 (298)
Q Consensus 257 ~~dgG~~~ 264 (298)
.++++...
T Consensus 192 ~~~~~~~~ 199 (450)
T PRK08261 192 RVGAADAA 199 (450)
T ss_pred EecCCccc
Confidence 99998753
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.23 E-value=5.6e-10 Score=97.49 Aligned_cols=210 Identities=14% Similarity=0.085 Sum_probs=119.0
Q ss_pred EEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEE
Q 022386 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV 94 (298)
Q Consensus 15 ~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li 94 (298)
+|||||+|.||.++++.|+++|++|++++|+........ . .. ..|+.. .. ....+..+|++|
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~----~~--~~~~~~-~~-------~~~~~~~~D~Vv 62 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK----W----EG--YKPWAP-LA-------ESEALEGADAVI 62 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc----c----ee--eecccc-cc-------hhhhcCCCCEEE
Confidence 689999999999999999999999999999865422111 0 01 112221 11 122345799999
Q ss_pred ECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC----------C
Q 022386 95 NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----------W 164 (298)
Q Consensus 95 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~----------~ 164 (298)
|+|+..... .....+.....+++|+.++..+++++...-.+ ...+|+.|+...+... +
T Consensus 63 h~a~~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~----------~~~~i~~S~~~~yg~~~~~~~~E~~~~ 130 (292)
T TIGR01777 63 NLAGEPIAD--KRWTEERKQEIRDSRIDTTRALVEAIAAAEQK----------PKVFISASAVGYYGTSEDRVFTEEDSP 130 (292)
T ss_pred ECCCCCccc--ccCCHHHHHHHHhcccHHHHHHHHHHHhcCCC----------ceEEEEeeeEEEeCCCCCCCcCcccCC
Confidence 999864321 12234455678889999988888887643110 1234444443221100 0
Q ss_pred -CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHH--------hhhccCCCCCCHHH
Q 022386 165 -YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA--------TDYMAAYKFGEKWD 235 (298)
Q Consensus 165 -~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~d 235 (298)
....|...+...+...+ .+. ..++.+..+.|+.+..+.. . .. ....... ........+...+|
T Consensus 131 ~~~~~~~~~~~~~e~~~~----~~~-~~~~~~~ilR~~~v~G~~~-~-~~-~~~~~~~~~~~~~~~g~~~~~~~~i~v~D 202 (292)
T TIGR01777 131 AGDDFLAELCRDWEEAAQ----AAE-DLGTRVVLLRTGIVLGPKG-G-AL-AKMLPPFRLGLGGPLGSGRQWFSWIHIED 202 (292)
T ss_pred CCCChHHHHHHHHHHHhh----hch-hcCCceEEEeeeeEECCCc-c-hh-HHHHHHHhcCcccccCCCCcccccEeHHH
Confidence 11122333333333322 222 3479999999999976531 1 11 1111001 11122245778999
Q ss_pred HHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 236 IAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 236 va~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
+++++..++..+. ..| .+++-++..++
T Consensus 203 va~~i~~~l~~~~--~~g-~~~~~~~~~~s 229 (292)
T TIGR01777 203 LVQLILFALENAS--ISG-PVNATAPEPVR 229 (292)
T ss_pred HHHHHHHHhcCcc--cCC-ceEecCCCccC
Confidence 9999999986432 233 57776665443
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.3e-09 Score=98.97 Aligned_cols=216 Identities=14% Similarity=0.121 Sum_probs=130.5
Q ss_pred CCCCcEEEEe----cCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHH-------HHHHhCCCCeEEEEccCCCHHHHH
Q 022386 9 ILKGKVALLT----GGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAV-------AALHSLGIPAIGLEGDVRKREDAV 77 (298)
Q Consensus 9 ~l~gk~~lVt----G~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~Dls~~~~~~ 77 (298)
....+++||| ||+|.||.++++.|+++|++|+++.|+........ .++.. ..+.++.+|+.| +.
T Consensus 49 ~~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~v~~v~~D~~d---~~ 123 (378)
T PLN00016 49 AVEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSS--AGVKTVWGDPAD---VK 123 (378)
T ss_pred ccccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhh--cCceEEEecHHH---HH
Confidence 3445789999 99999999999999999999999999865422211 12222 237788888876 33
Q ss_pred HHHHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccc
Q 022386 78 RVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 157 (298)
Q Consensus 78 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~ 157 (298)
.++. ...+|++||+++. .. .++..+ +..+++.+ -.++|++||.
T Consensus 124 ~~~~-----~~~~d~Vi~~~~~---------~~-----------~~~~~l----l~aa~~~g--------vkr~V~~SS~ 166 (378)
T PLN00016 124 SKVA-----GAGFDVVYDNNGK---------DL-----------DEVEPV----ADWAKSPG--------LKQFLFCSSA 166 (378)
T ss_pred hhhc-----cCCccEEEeCCCC---------CH-----------HHHHHH----HHHHHHcC--------CCEEEEEccH
Confidence 3321 1379999998762 11 122223 33343332 3579999997
Q ss_pred ccccCCCC--------chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhcc---
Q 022386 158 LHYTATWY--------QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA--- 226 (298)
Q Consensus 158 ~~~~~~~~--------~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~--- 226 (298)
..+..... ...+. +|...+.+.+ ..++.+..+.|+++..+..... ....+...+....+
T Consensus 167 ~vyg~~~~~p~~E~~~~~p~~-sK~~~E~~l~--------~~~l~~~ilRp~~vyG~~~~~~-~~~~~~~~~~~~~~i~~ 236 (378)
T PLN00016 167 GVYKKSDEPPHVEGDAVKPKA-GHLEVEAYLQ--------KLGVNWTSFRPQYIYGPGNNKD-CEEWFFDRLVRGRPVPI 236 (378)
T ss_pred hhcCCCCCCCCCCCCcCCCcc-hHHHHHHHHH--------HcCCCeEEEeceeEECCCCCCc-hHHHHHHHHHcCCceee
Confidence 65432110 01112 6777776543 2368999999999986643221 11222222222111
Q ss_pred ------CCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhh
Q 022386 227 ------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVE 283 (298)
Q Consensus 227 ------~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~ 283 (298)
...+...+|+++++..++..+ ...|+.+++.++..++ ...+++.+.+.+.
T Consensus 237 ~g~g~~~~~~i~v~Dva~ai~~~l~~~--~~~~~~yni~~~~~~s-----~~el~~~i~~~~g 292 (378)
T PLN00016 237 PGSGIQLTQLGHVKDLASMFALVVGNP--KAAGQIFNIVSDRAVT-----FDGMAKACAKAAG 292 (378)
T ss_pred cCCCCeeeceecHHHHHHHHHHHhcCc--cccCCEEEecCCCccC-----HHHHHHHHHHHhC
Confidence 123567899999999888653 2357899998886654 3444444444333
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.23 E-value=4.4e-10 Score=98.40 Aligned_cols=177 Identities=16% Similarity=0.129 Sum_probs=123.5
Q ss_pred cEEEEecCCchhHHHHHHHHHHc-CCcEEEEcCChh---HHHHHHHHHH-------hCCCCeEEEEccCCC------HHH
Q 022386 13 KVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKT---VLRSAVAALH-------SLGIPAIGLEGDVRK------RED 75 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~-G~~Vv~~~r~~~---~~~~~~~~~~-------~~~~~~~~~~~Dls~------~~~ 75 (298)
+++++|||||.||..+...|+.+ -++|++.-|-++ ..+++.+.+. ....++..+..|++. +..
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 57999999999999999999876 458998877543 3444444444 235679999999993 444
Q ss_pred HHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEec
Q 022386 76 AVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS 155 (298)
Q Consensus 76 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vs 155 (298)
.+.+.+ .+|.+|||++.... ...+.+....|+.|+..+++.+...- ...+.+||
T Consensus 81 ~~~La~-------~vD~I~H~gA~Vn~-------v~pYs~L~~~NVlGT~evlrLa~~gk------------~Kp~~yVS 134 (382)
T COG3320 81 WQELAE-------NVDLIIHNAALVNH-------VFPYSELRGANVLGTAEVLRLAATGK------------PKPLHYVS 134 (382)
T ss_pred HHHHhh-------hcceEEecchhhcc-------cCcHHHhcCcchHhHHHHHHHHhcCC------------CceeEEEe
Confidence 555544 69999999985321 12345667899999999998876321 22388898
Q ss_pred ccccccCC--------------------CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChH
Q 022386 156 ATLHYTAT--------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE 215 (298)
Q Consensus 156 s~~~~~~~--------------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~ 215 (298)
|+...... .....|+-||.+.+.+++... ..|+++..+.||++-.+.....+...
T Consensus 135 sisv~~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~-----~rGLpv~I~Rpg~I~gds~tG~~n~~ 209 (382)
T COG3320 135 SISVGETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAG-----DRGLPVTIFRPGYITGDSRTGALNTR 209 (382)
T ss_pred eeeeccccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHh-----hcCCCeEEEecCeeeccCccCccccc
Confidence 87743221 123689999999999999773 33799999999999655433333334
Q ss_pred HHHHH
Q 022386 216 EIRSK 220 (298)
Q Consensus 216 ~~~~~ 220 (298)
++..+
T Consensus 210 D~~~R 214 (382)
T COG3320 210 DFLTR 214 (382)
T ss_pred hHHHH
Confidence 44433
|
|
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=99.20 E-value=6.7e-11 Score=99.45 Aligned_cols=101 Identities=15% Similarity=0.167 Sum_probs=78.7
Q ss_pred EEEEecC-CchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 14 VALLTGG-GSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 14 ~~lVtG~-t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
+=.||.. +||||+++|++|+++|++|+++++... +... ....||+++.++++++++.+.+.++++|+
T Consensus 16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~~----~~~~~Dv~d~~s~~~l~~~v~~~~g~iDi 83 (227)
T TIGR02114 16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKPE----PHPNLSIREIETTKDLLITLKELVQEHDI 83 (227)
T ss_pred ceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------cccc----cCCcceeecHHHHHHHHHHHHHHcCCCCE
Confidence 4456654 689999999999999999999876321 1110 02458999999999999999999999999
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHH
Q 022386 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129 (298)
Q Consensus 93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 129 (298)
+|||||+....++.+.+.++|+++ +..+.+++.+
T Consensus 84 LVnnAgv~d~~~~~~~s~e~~~~~---~~~~~~~~~~ 117 (227)
T TIGR02114 84 LIHSMAVSDYTPVYMTDLEQVQAS---DNLNEFLSKQ 117 (227)
T ss_pred EEECCEeccccchhhCCHHHHhhh---cchhhhhccc
Confidence 999999877778888899999876 4445555544
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.5e-10 Score=95.70 Aligned_cols=227 Identities=19% Similarity=0.155 Sum_probs=148.8
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHH----hCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH----SLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~----~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.+|++||||-||-=|.-+++.|+++|+.|+-+-|++.......-.+. ....++.++.+|++|..++.++++.+
T Consensus 1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v--- 77 (345)
T COG1089 1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV--- 77 (345)
T ss_pred CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc---
Confidence 36999999999999999999999999999998887432111100221 22445888999999999999999987
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc------
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY------ 160 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~------ 160 (298)
.+|-+.|.++.+..+- +.+.-+.+.+++..|++.++.++.-.-.+ ..++..-||.--+
T Consensus 78 --~PdEIYNLaAQS~V~v----SFe~P~~T~~~~~iGtlrlLEaiR~~~~~----------~~rfYQAStSE~fG~v~~~ 141 (345)
T COG1089 78 --QPDEIYNLAAQSHVGV----SFEQPEYTADVDAIGTLRLLEAIRILGEK----------KTRFYQASTSELYGLVQEI 141 (345)
T ss_pred --Cchhheeccccccccc----cccCcceeeeechhHHHHHHHHHHHhCCc----------ccEEEecccHHhhcCcccC
Confidence 6999999998754432 33334567889999999999988754421 2335544443211
Q ss_pred -----cCCCCchhhHHHHHHHHHHHHHHHHHhc--CCCCeEEEEEeCCcccCCcccCcCChHHHHHH----------Hhh
Q 022386 161 -----TATWYQIHVSAAKAAVDSITRSLALEWG--TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK----------ATD 223 (298)
Q Consensus 161 -----~~~~~~~~Y~~sK~a~~~l~~~la~e~~--~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~----------~~~ 223 (298)
.|..+.+.|+++|....-++......++ ...||-.|.=+|. ..+.+-....... ..+ +.+
T Consensus 142 pq~E~TPFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~--Rge~FVTRKIt~a-va~Ik~G~q~~l~lGN 218 (345)
T COG1089 142 PQKETTPFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPL--RGETFVTRKITRA-VARIKLGLQDKLYLGN 218 (345)
T ss_pred ccccCCCCCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCC--CccceehHHHHHH-HHHHHccccceEEecc
Confidence 2334678999999999999999877664 1334555544443 2222111111111 111 112
Q ss_pred hccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCC
Q 022386 224 YMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW 263 (298)
Q Consensus 224 ~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~ 263 (298)
....+.|+.+.|.+++++.++..+. ...+.+.-|.+
T Consensus 219 ldAkRDWG~A~DYVe~mwlmLQq~~----PddyViATg~t 254 (345)
T COG1089 219 LDAKRDWGHAKDYVEAMWLMLQQEE----PDDYVIATGET 254 (345)
T ss_pred ccccccccchHHHHHHHHHHHccCC----CCceEEecCce
Confidence 2345678999999999998886432 34555555544
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.14 E-value=7.7e-09 Score=100.85 Aligned_cols=141 Identities=18% Similarity=0.145 Sum_probs=98.0
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
.+++|||||+|.||+++++.|.++|++|.. ...|++|.+.+.+.++.. ++|
T Consensus 380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~------------------------~~~~l~d~~~v~~~i~~~-----~pd 430 (668)
T PLN02260 380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEY------------------------GKGRLEDRSSLLADIRNV-----KPT 430 (668)
T ss_pred CceEEEECCCchHHHHHHHHHHhCCCeEEe------------------------eccccccHHHHHHHHHhh-----CCC
Confidence 457999999999999999999999987631 124678888887776643 799
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc----------
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT---------- 161 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~---------- 161 (298)
++||+|+....... +...++-+..+++|+.++.++++++...- .+++++||...+.
T Consensus 431 ~Vih~Aa~~~~~~~-~~~~~~~~~~~~~N~~gt~~l~~a~~~~g-------------~~~v~~Ss~~v~~~~~~~~~~~~ 496 (668)
T PLN02260 431 HVFNAAGVTGRPNV-DWCESHKVETIRANVVGTLTLADVCRENG-------------LLMMNFATGCIFEYDAKHPEGSG 496 (668)
T ss_pred EEEECCcccCCCCC-ChHHhCHHHHHHHHhHHHHHHHHHHHHcC-------------CeEEEEcccceecCCcccccccC
Confidence 99999986432111 11223456788999999999999987531 2355665432110
Q ss_pred -C-------CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 022386 162 -A-------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA 199 (298)
Q Consensus 162 -~-------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~ 199 (298)
+ .+....|+.||.+.+.+++.+... ..+|+..+.
T Consensus 497 ~p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~~~~----~~~r~~~~~ 538 (668)
T PLN02260 497 IGFKEEDKPNFTGSFYSKTKAMVEELLREYDNV----CTLRVRMPI 538 (668)
T ss_pred CCCCcCCCCCCCCChhhHHHHHHHHHHHhhhhh----eEEEEEEec
Confidence 1 112367999999999999877322 256766665
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.10 E-value=7.7e-09 Score=86.89 Aligned_cols=203 Identities=14% Similarity=0.025 Sum_probs=133.8
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
.+++++++||||.|+||.++|.+|..+|+.|++++.-..........+.. ..++..+.-|+..+ ++.
T Consensus 24 p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~-~~~fel~~hdv~~p-----l~~------- 90 (350)
T KOG1429|consen 24 PSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIG-HPNFELIRHDVVEP-----LLK------- 90 (350)
T ss_pred CCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhcc-CcceeEEEeechhH-----HHH-------
Confidence 56779999999999999999999999999999988765433333222211 23455555666654 333
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC-----
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----- 163 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~----- 163 (298)
.+|.++|.|....+......+ .+++..|+.++++.+..+.+.. .+++..|+.--+ +.
T Consensus 91 evD~IyhLAapasp~~y~~np----vktIktN~igtln~lglakrv~-------------aR~l~aSTseVY-gdp~~hp 152 (350)
T KOG1429|consen 91 EVDQIYHLAAPASPPHYKYNP----VKTIKTNVIGTLNMLGLAKRVG-------------ARFLLASTSEVY-GDPLVHP 152 (350)
T ss_pred HhhhhhhhccCCCCcccccCc----cceeeecchhhHHHHHHHHHhC-------------ceEEEeeccccc-CCcccCC
Confidence 577788888754332221111 3467889999999888776544 336666554322 22
Q ss_pred ------------CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC--hHHHHHHHhh------
Q 022386 164 ------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATD------ 223 (298)
Q Consensus 164 ------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~--~~~~~~~~~~------ 223 (298)
....+|.-.|.+.+.|+.+..++. ||.+....+-.+..|.+.-... ...+......
T Consensus 153 q~e~ywg~vnpigpr~cydegKr~aE~L~~~y~k~~----giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv 228 (350)
T KOG1429|consen 153 QVETYWGNVNPIGPRSCYDEGKRVAETLCYAYHKQE----GIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTV 228 (350)
T ss_pred CccccccccCcCCchhhhhHHHHHHHHHHHHhhccc----CcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEE
Confidence 246789999999999999988775 5777777776666665433321 1222222222
Q ss_pred ---hccCCCCCCHHHHHHHHHHhcCC
Q 022386 224 ---YMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 224 ---~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
....+.|.-..|+.+.++.|...
T Consensus 229 ~g~G~qtRSF~yvsD~Vegll~Lm~s 254 (350)
T KOG1429|consen 229 YGDGKQTRSFQYVSDLVEGLLRLMES 254 (350)
T ss_pred EcCCcceEEEEeHHHHHHHHHHHhcC
Confidence 23335577788999999988854
|
|
| >COG4982 3-oxoacyl-[acyl-carrier protein] | Back alignment and domain information |
|---|
Probab=98.91 E-value=2.4e-07 Score=85.42 Aligned_cols=248 Identities=16% Similarity=0.038 Sum_probs=150.5
Q ss_pred CCCCCCCcEEEEecCC-chhHHHHHHHHHHcCCcEEEEcCChh-HHHHHHHHHHhC----CCCeEEEEccCCCHHHHHHH
Q 022386 6 KGDILKGKVALLTGGG-SGIGFEISLQLGKHGAAIAIMGRRKT-VLRSAVAALHSL----GIPAIGLEGDVRKREDAVRV 79 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t-~giG~~ia~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~ 79 (298)
+.....++++||||++ +.||-+++..|++-|++|+++..+-+ +..+....+... +..+..+..++.+..+++.+
T Consensus 390 ~~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAl 469 (866)
T COG4982 390 NGGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDAL 469 (866)
T ss_pred CCCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHH
Confidence 4556788999999999 78999999999999999999877643 333444444332 33456678999999999999
Q ss_pred HHHHHHHhC--------------CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCC
Q 022386 80 VESTINHFG--------------KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASS 145 (298)
Q Consensus 80 ~~~~~~~~~--------------~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ 145 (298)
++.|-+... .+|.++-.|.+...+.+.+..+.. +..+++-+-....++-.+.+.-..++-
T Consensus 470 IewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsra-E~~~rilLw~V~Rliggl~~~~s~r~v----- 543 (866)
T COG4982 470 IEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRA-EFAMRILLWNVLRLIGGLKKQGSSRGV----- 543 (866)
T ss_pred HHHhccccccccCCcceecccccCcceeeecccCCccCccccCCchH-HHHHHHHHHHHHHHHHHhhhhccccCc-----
Confidence 999965422 367788888876666666655421 222333333333333333333222211
Q ss_pred CCCcEEEEecccccccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhc
Q 022386 146 SSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM 225 (298)
Q Consensus 146 ~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~ 225 (298)
..+-++|.-.|... -.+.+.+.|+-||.+++.++--+..|-.....+.+..-..||+....... ..+.......+.
T Consensus 544 ~~R~hVVLPgSPNr-G~FGgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGLMg---~Ndiiv~aiEk~ 619 (866)
T COG4982 544 DTRLHVVLPGSPNR-GMFGGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTGLMG---HNDIIVAAIEKA 619 (866)
T ss_pred ccceEEEecCCCCC-CccCCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeeccccccC---CcchhHHHHHHh
Confidence 11344555444321 12234689999999999999888777422224555555678887542222 122222222222
Q ss_pred cCCCCCCHHHHHHHHHHhcCCCCC---CccccEEEeCCCCCC
Q 022386 226 AAYKFGEKWDIAMAALYLASDAGK---YVNGNTLIVDGGNWL 264 (298)
Q Consensus 226 ~~~~~~~~~dva~~~~~L~s~~~~---~~~G~~i~~dgG~~~ 264 (298)
... --+.+|++..++-|++.... .-+--..+++||...
T Consensus 620 GV~-tyS~~EmA~~LLgL~saev~e~a~~~PI~aDLtGGL~~ 660 (866)
T COG4982 620 GVR-TYSTDEMAFNLLGLASAEVVELAASSPITADLTGGLGE 660 (866)
T ss_pred Cce-ecCHHHHHHHHHhhccHHHHHHHhcCCeEeeccCcccc
Confidence 223 33778899888888876422 111224457788554
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=98.90 E-value=2e-08 Score=84.93 Aligned_cols=215 Identities=21% Similarity=0.173 Sum_probs=126.5
Q ss_pred EEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEE
Q 022386 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV 94 (298)
Q Consensus 15 ~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li 94 (298)
|+|+||||.+|+.+++.|++.|++|.++.|+.. .+....+...+ +..+.+|+.|.+++.++++ ++|.++
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~--~~~~~~l~~~g--~~vv~~d~~~~~~l~~al~-------g~d~v~ 69 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPS--SDRAQQLQALG--AEVVEADYDDPESLVAALK-------GVDAVF 69 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSH--HHHHHHHHHTT--TEEEES-TT-HHHHHHHHT-------TCSEEE
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccc--hhhhhhhhccc--ceEeecccCCHHHHHHHHc-------CCceEE
Confidence 689999999999999999999999999999973 23345555555 4567999999999988886 899999
Q ss_pred ECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC----CCchhhH
Q 022386 95 NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----WYQIHVS 170 (298)
Q Consensus 95 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~----~~~~~Y~ 170 (298)
++.+.... .. ......+++++...-. .++| .||....... .+...+-
T Consensus 70 ~~~~~~~~------~~----------~~~~~~li~Aa~~agV------------k~~v-~ss~~~~~~~~~~~~p~~~~~ 120 (233)
T PF05368_consen 70 SVTPPSHP------SE----------LEQQKNLIDAAKAAGV------------KHFV-PSSFGADYDESSGSEPEIPHF 120 (233)
T ss_dssp EESSCSCC------CH----------HHHHHHHHHHHHHHT-------------SEEE-ESEESSGTTTTTTSTTHHHHH
T ss_pred eecCcchh------hh----------hhhhhhHHHhhhcccc------------ceEE-EEEecccccccccccccchhh
Confidence 88874320 11 1233345555554332 2365 4554433311 1122233
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChH-HHH-HH--HhhhccC---CCC-CCHHHHHHHHHH
Q 022386 171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE-EIR-SK--ATDYMAA---YKF-GEKWDIAMAALY 242 (298)
Q Consensus 171 ~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~-~~~-~~--~~~~~~~---~~~-~~~~dva~~~~~ 242 (298)
..|..++...+. .++....|.||+.... ........ ... .. ..-..+. ..+ .+.+|+++.+..
T Consensus 121 ~~k~~ie~~l~~--------~~i~~t~i~~g~f~e~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~ 191 (233)
T PF05368_consen 121 DQKAEIEEYLRE--------SGIPYTIIRPGFFMEN-LLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAA 191 (233)
T ss_dssp HHHHHHHHHHHH--------CTSEBEEEEE-EEHHH-HHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHH
T ss_pred hhhhhhhhhhhh--------ccccceeccccchhhh-hhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHH
Confidence 456666544432 2689999999987532 11100000 000 00 0000011 123 378999999999
Q ss_pred hcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhhh
Q 022386 243 LASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVER 284 (298)
Q Consensus 243 L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~~ 284 (298)
++.++...-.|..+.+.| ..++ .+.+.+.+.+.+.+
T Consensus 192 il~~p~~~~~~~~~~~~~-~~~t-----~~eia~~~s~~~G~ 227 (233)
T PF05368_consen 192 ILLDPEKHNNGKTIFLAG-ETLT-----YNEIAAILSKVLGK 227 (233)
T ss_dssp HHHSGGGTTEEEEEEEGG-GEEE-----HHHHHHHHHHHHTS
T ss_pred HHcChHHhcCCEEEEeCC-CCCC-----HHHHHHHHHHHHCC
Confidence 998865554788888755 3333 35555555544443
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=3.3e-08 Score=86.32 Aligned_cols=84 Identities=24% Similarity=0.222 Sum_probs=67.9
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCc-EEEEcCCh---hHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRK---TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~-Vv~~~r~~---~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
++++|+++|+|+ ||+|++++..|++.|++ |++++|+. ++.+++.+++.+.+..+.+..+|+++.++++..++
T Consensus 123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~--- 198 (289)
T PRK12548 123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA--- 198 (289)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc---
Confidence 578999999999 69999999999999996 99999986 66777777776655556667789988777765544
Q ss_pred HHhCCccEEEECCCCC
Q 022386 85 NHFGKLDILVNAAAGN 100 (298)
Q Consensus 85 ~~~~~id~li~~ag~~ 100 (298)
..|++|||....
T Consensus 199 ----~~DilINaTp~G 210 (289)
T PRK12548 199 ----SSDILVNATLVG 210 (289)
T ss_pred ----cCCEEEEeCCCC
Confidence 569999998653
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.8e-08 Score=98.16 Aligned_cols=165 Identities=19% Similarity=0.178 Sum_probs=136.3
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCc-EEEEcCChhHHHH---HHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRS---AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~-Vv~~~r~~~~~~~---~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
..|.++|+||-||.|.+++.+|.++|++ +++.+|+.-+..- ....+...|.++..-..|++..+..+.+++... +
T Consensus 1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~-k 1845 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESN-K 1845 (2376)
T ss_pred ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhh-h
Confidence 3689999999999999999999999996 7777776433222 334455667777777789999999999988764 5
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
.+.+.+++|.|.......+++.+++.|...-+..+.++.++-+.-...-.+ -..+|.+||...-++..++
T Consensus 1846 l~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~----------LdyFv~FSSvscGRGN~GQ 1915 (2376)
T KOG1202|consen 1846 LGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPE----------LDYFVVFSSVSCGRGNAGQ 1915 (2376)
T ss_pred cccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcc----------cceEEEEEeecccCCCCcc
Confidence 689999999999888888899999999999999999999987776655443 2458999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHH
Q 022386 167 IHVSAAKAAVDSITRSLALE 186 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e 186 (298)
..|+.+.++++.++..-..+
T Consensus 1916 tNYG~aNS~MERiceqRr~~ 1935 (2376)
T KOG1202|consen 1916 TNYGLANSAMERICEQRRHE 1935 (2376)
T ss_pred cccchhhHHHHHHHHHhhhc
Confidence 99999999999999977554
|
|
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=98.79 E-value=4e-08 Score=89.07 Aligned_cols=82 Identities=22% Similarity=0.263 Sum_probs=63.6
Q ss_pred CCCCCcEEEEecC----------------CchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCC
Q 022386 8 DILKGKVALLTGG----------------GSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71 (298)
Q Consensus 8 ~~l~gk~~lVtG~----------------t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls 71 (298)
.+|+||+++|||| +|++|+++|++|+++|++|++++++.+ .+ ... ....+|++
T Consensus 184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~--------~~~--~~~~~dv~ 252 (399)
T PRK05579 184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP--------TPA--GVKRIDVE 252 (399)
T ss_pred cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc--------CCC--CcEEEccC
Confidence 5789999999999 455999999999999999999988752 11 011 12467999
Q ss_pred CHHHHHHHHHHHHHHhCCccEEEECCCCCCCC
Q 022386 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLV 103 (298)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~ 103 (298)
+.++..+.+. +.++++|++|||||+....
T Consensus 253 ~~~~~~~~v~---~~~~~~DilI~~Aav~d~~ 281 (399)
T PRK05579 253 SAQEMLDAVL---AALPQADIFIMAAAVADYR 281 (399)
T ss_pred CHHHHHHHHH---HhcCCCCEEEEcccccccc
Confidence 8888766655 5578999999999975443
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=98.78 E-value=7.6e-07 Score=75.13 Aligned_cols=239 Identities=16% Similarity=0.105 Sum_probs=147.0
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
.++|-++-|.||||.+|+-++++|++.|-+|++-.|..+..-...+-+-+ =+++.++..|+.|++|+++.++
T Consensus 58 S~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGd-LGQvl~~~fd~~DedSIr~vvk------- 129 (391)
T KOG2865|consen 58 SVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGD-LGQVLFMKFDLRDEDSIRAVVK------- 129 (391)
T ss_pred cccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeeccc-ccceeeeccCCCCHHHHHHHHH-------
Confidence 67788999999999999999999999999999988875432222221111 2568999999999999999988
Q ss_pred CccEEEECCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 89 KLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 89 ~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
.-+++||..|.-.+ +.+. .-++|+.++-.+.+.+...-.+ ++|.+|+..+. ....+
T Consensus 130 ~sNVVINLIGrd~eTknf~---------f~Dvn~~~aerlAricke~GVe------------rfIhvS~Lgan--v~s~S 186 (391)
T KOG2865|consen 130 HSNVVINLIGRDYETKNFS---------FEDVNVHIAERLARICKEAGVE------------RFIHVSCLGAN--VKSPS 186 (391)
T ss_pred hCcEEEEeeccccccCCcc---------cccccchHHHHHHHHHHhhChh------------heeehhhcccc--ccChH
Confidence 56789999995433 2221 2247777777777766654433 39999887644 33455
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCC--------CHHHHHHH
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG--------EKWDIAMA 239 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~dva~~ 239 (298)
-|--||++-+-.++.. +. ....|.|..+....-+--..-..++.+ ....|+..-+ -.-|||.+
T Consensus 187 r~LrsK~~gE~aVrda---fP-----eAtIirPa~iyG~eDrfln~ya~~~rk-~~~~pL~~~GekT~K~PVyV~DVaa~ 257 (391)
T KOG2865|consen 187 RMLRSKAAGEEAVRDA---FP-----EATIIRPADIYGTEDRFLNYYASFWRK-FGFLPLIGKGEKTVKQPVYVVDVAAA 257 (391)
T ss_pred HHHHhhhhhHHHHHhh---CC-----cceeechhhhcccchhHHHHHHHHHHh-cCceeeecCCcceeeccEEEehHHHH
Confidence 6788888887777643 32 245577776653311000000111111 2223333222 23499999
Q ss_pred HHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhhhccCCCCCCCC
Q 022386 240 ALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKSRDSPVGIP 294 (298)
Q Consensus 240 ~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (298)
++-.+.++. -.|..+..-|-. +..--.+++.+.+...+...=.+.|+|
T Consensus 258 IvnAvkDp~--s~Gktye~vGP~-----~yql~eLvd~my~~~~~~~ry~r~~mP 305 (391)
T KOG2865|consen 258 IVNAVKDPD--SMGKTYEFVGPD-----RYQLSELVDIMYDMAREWPRYVRLPMP 305 (391)
T ss_pred HHHhccCcc--ccCceeeecCCc-----hhhHHHHHHHHHHHHhhccccccCCcH
Confidence 999998763 357777653321 122233445555555443333333444
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.70 E-value=3.9e-06 Score=72.44 Aligned_cols=217 Identities=16% Similarity=0.043 Sum_probs=130.7
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
+.++||||||.+|.+++++|.++|+.|++..|+.+...... ..+.+...|+.+..++...++ ++|.
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-------~~v~~~~~d~~~~~~l~~a~~-------G~~~ 66 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-------GGVEVVLGDLRDPKSLVAGAK-------GVDG 66 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-------CCcEEEEeccCCHhHHHHHhc-------cccE
Confidence 36899999999999999999999999999999987655544 558889999999999998876 7888
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHHH
Q 022386 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 172 (298)
Q Consensus 93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~s 172 (298)
+++..+... .... .......+.....+... . . ..+++.+|...... .....|..+
T Consensus 67 ~~~i~~~~~-~~~~---------~~~~~~~~~~~~a~~a~----~-~--------~~~~~~~s~~~~~~--~~~~~~~~~ 121 (275)
T COG0702 67 VLLISGLLD-GSDA---------FRAVQVTAVVRAAEAAG----A-G--------VKHGVSLSVLGADA--ASPSALARA 121 (275)
T ss_pred EEEEecccc-cccc---------hhHHHHHHHHHHHHHhc----C-C--------ceEEEEeccCCCCC--CCccHHHHH
Confidence 888887533 2110 11122223333333332 1 1 23467776665543 234678999
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEEEEEe-CCcccCCcccCcCChHHHHHHHhhhccC----CCCCCHHHHHHHHHHhcCCC
Q 022386 173 KAAVDSITRSLALEWGTDYAIRVNGIA-PGPIKDTAGVSKLAPEEIRSKATDYMAA----YKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 173 K~a~~~l~~~la~e~~~~~girv~~i~-PG~v~t~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~dva~~~~~L~s~~ 247 (298)
|...+...++. |+.-..+. ++++.... ... ............+. -.....+|++..+...+..+
T Consensus 122 ~~~~e~~l~~s--------g~~~t~lr~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~ 190 (275)
T COG0702 122 KAAVEAALRSS--------GIPYTTLRRAAFYLGAG-AAF--IEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAP 190 (275)
T ss_pred HHHHHHHHHhc--------CCCeEEEecCeeeeccc-hhH--HHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCC
Confidence 99998888755 45434444 33332111 010 01111111000111 23457789999888877654
Q ss_pred CCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhhhcc
Q 022386 248 GKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKS 286 (298)
Q Consensus 248 ~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (298)
. ..|..+.+.|-... ........+...+.++.
T Consensus 191 ~--~~~~~~~l~g~~~~-----~~~~~~~~l~~~~gr~~ 222 (275)
T COG0702 191 A--TAGRTYELAGPEAL-----TLAELASGLDYTIGRPV 222 (275)
T ss_pred c--ccCcEEEccCCcee-----cHHHHHHHHHHHhCCcc
Confidence 3 45666666555333 24445555555554443
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.64 E-value=3.7e-07 Score=75.05 Aligned_cols=82 Identities=22% Similarity=0.287 Sum_probs=66.8
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
++++++++|+||+|++|+.+++.|+++|++|++++|+.++.+++.+.+.+.. ......+|..+.+++.+.++
T Consensus 25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~------- 96 (194)
T cd01078 25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF-GEGVGAVETSDDAARAAAIK------- 96 (194)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc-CCcEEEeeCCCHHHHHHHHh-------
Confidence 7889999999999999999999999999999999999888888777775321 23345678888888777664
Q ss_pred CccEEEECCC
Q 022386 89 KLDILVNAAA 98 (298)
Q Consensus 89 ~id~li~~ag 98 (298)
..|++|++..
T Consensus 97 ~~diVi~at~ 106 (194)
T cd01078 97 GADVVFAAGA 106 (194)
T ss_pred cCCEEEECCC
Confidence 6788888765
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.64 E-value=9.8e-07 Score=72.05 Aligned_cols=200 Identities=16% Similarity=0.109 Sum_probs=123.1
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCC---cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGA---AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~---~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
++++|||++|-+|.+|.+.+.++|. +.++.+.. .||+++.++.+++|+.. +
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk---------------------d~DLt~~a~t~~lF~~e-----k 55 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK---------------------DADLTNLADTRALFESE-----K 55 (315)
T ss_pred ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc---------------------cccccchHHHHHHHhcc-----C
Confidence 6899999999999999999999876 34444332 37999999999999864 7
Q ss_pred ccEEEECCCCCCCCCCC--CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc-------
Q 022386 90 LDILVNAAAGNFLVPAE--DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY------- 160 (298)
Q Consensus 90 id~li~~ag~~~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~------- 160 (298)
+.++||.|+... +-+. ..+.+-|+. |+.-.-++++.+..+-.++ +++..|...+
T Consensus 56 PthVIhlAAmVG-Glf~N~~ynldF~r~----Nl~indNVlhsa~e~gv~K------------~vsclStCIfPdkt~yP 118 (315)
T KOG1431|consen 56 PTHVIHLAAMVG-GLFHNNTYNLDFIRK----NLQINDNVLHSAHEHGVKK------------VVSCLSTCIFPDKTSYP 118 (315)
T ss_pred CceeeehHhhhc-chhhcCCCchHHHhh----cceechhHHHHHHHhchhh------------hhhhcceeecCCCCCCC
Confidence 888999986321 1111 123344444 3333344444444443321 4433332211
Q ss_pred ---------cCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC----hHHHHHHH------
Q 022386 161 ---------TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA----PEEIRSKA------ 221 (298)
Q Consensus 161 ---------~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~----~~~~~~~~------ 221 (298)
.+.|....|+.+|..+.-..++...+.+ -...++.|-.+..|.-.-... -+....++
T Consensus 119 IdEtmvh~gpphpsN~gYsyAKr~idv~n~aY~~qhg----~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~ 194 (315)
T KOG1431|consen 119 IDETMVHNGPPHPSNFGYSYAKRMIDVQNQAYRQQHG----RDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRN 194 (315)
T ss_pred CCHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHhC----CceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhc
Confidence 1123456799999888888888888864 567777777776542111110 11222211
Q ss_pred --------hhhccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCC
Q 022386 222 --------TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN 262 (298)
Q Consensus 222 --------~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~ 262 (298)
....|++.+....|+|+++.|++.+-. .=+.|++..|.
T Consensus 195 gtd~~~VwGsG~PlRqFiys~DLA~l~i~vlr~Y~---~vEpiils~ge 240 (315)
T KOG1431|consen 195 GTDELTVWGSGSPLRQFIYSDDLADLFIWVLREYE---GVEPIILSVGE 240 (315)
T ss_pred CCceEEEecCCChHHHHhhHhHHHHHHHHHHHhhc---CccceEeccCc
Confidence 223466677788899999999996433 34566666665
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=98.59 E-value=2.6e-07 Score=77.90 Aligned_cols=99 Identities=15% Similarity=0.120 Sum_probs=68.4
Q ss_pred EEEEecCCch-hHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 14 VALLTGGGSG-IGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 14 ~~lVtG~t~g-iG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
+-.||+.++| +|.++|++|+++|++|++++++... . ......+.++.+ ++.+++.+.+.+.++.+|+
T Consensus 17 VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~-~------~~~~~~v~~i~v-----~s~~~m~~~l~~~~~~~Di 84 (229)
T PRK06732 17 VRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAV-K------PEPHPNLSIIEI-----ENVDDLLETLEPLVKDHDV 84 (229)
T ss_pred ceeecCccchHHHHHHHHHHHhCCCEEEEEECcccc-c------CCCCCCeEEEEE-----ecHHHHHHHHHHHhcCCCE
Confidence 5677766655 9999999999999999999876421 0 001124555554 2334444445555678999
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHhhhHHH
Q 022386 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT 124 (298)
Q Consensus 93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~ 124 (298)
+|||||.....+....+.++|...+++|....
T Consensus 85 vIh~AAvsd~~~~~~~~~~~~~~~~~v~~~~~ 116 (229)
T PRK06732 85 LIHSMAVSDYTPVYMTDLEEVSASDNLNEFLT 116 (229)
T ss_pred EEeCCccCCceehhhhhhhhhhhhhhhhhhhc
Confidence 99999987656666677888888888866544
|
|
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.5e-07 Score=83.64 Aligned_cols=111 Identities=21% Similarity=0.210 Sum_probs=73.7
Q ss_pred CCCCCcEEEEecC---------------Cch-hHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCC
Q 022386 8 DILKGKVALLTGG---------------GSG-IGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71 (298)
Q Consensus 8 ~~l~gk~~lVtG~---------------t~g-iG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls 71 (298)
.+|+||+++|||| |+| +|.++|+.|..+|++|++++++.... ... ....+|++
T Consensus 181 ~~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---------~~~--~~~~~~v~ 249 (390)
T TIGR00521 181 EDLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL---------TPP--GVKSIKVS 249 (390)
T ss_pred cccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC---------CCC--CcEEEEec
Confidence 4689999999999 666 99999999999999999988764321 111 22467999
Q ss_pred CHHHH-HHHHHHHHHHhCCccEEEECCCCCCCCCCCCCC--HHHHHHHHHhhhHHHHHHHHHHH
Q 022386 72 KREDA-VRVVESTINHFGKLDILVNAAAGNFLVPAEDLS--PNGFRTVIEIDSVGTFIMCHEAL 132 (298)
Q Consensus 72 ~~~~~-~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~--~~~~~~~~~~n~~~~~~l~~~~~ 132 (298)
+.++. ++++++. ++.+|++|+|||+....+....+ .......+.+|+.-.--+++.+.
T Consensus 250 ~~~~~~~~~~~~~---~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~ 310 (390)
T TIGR00521 250 TAEEMLEAALNEL---AKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVR 310 (390)
T ss_pred cHHHHHHHHHHhh---cccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHH
Confidence 98888 5555443 47899999999986554432111 11111234455555544444444
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.8e-06 Score=78.79 Aligned_cols=166 Identities=16% Similarity=0.182 Sum_probs=110.6
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcC--C-cEEEEcCCh---hHHHH--------HHHHHHhCC----CCeEEEEccC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHG--A-AIAIMGRRK---TVLRS--------AVAALHSLG----IPAIGLEGDV 70 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G--~-~Vv~~~r~~---~~~~~--------~~~~~~~~~----~~~~~~~~Dl 70 (298)
-+++|+++||||||++|+-+.+.|+..- . +++++-|.. +..++ +.+.+.+.. .++..+..|+
T Consensus 9 f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi 88 (467)
T KOG1221|consen 9 FYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDI 88 (467)
T ss_pred HhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccc
Confidence 3689999999999999999999999753 2 566665542 11122 223333332 3577788888
Q ss_pred CCH------HHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCC
Q 022386 71 RKR------EDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQAS 144 (298)
Q Consensus 71 s~~------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~ 144 (298)
+++ ++.+.++ ..+|++||+|+... ..|.++..+.+|.+|+..+++.+.....-+
T Consensus 89 ~~~~LGis~~D~~~l~-------~eV~ivih~AAtvr-------Fde~l~~al~iNt~Gt~~~l~lak~~~~l~------ 148 (467)
T KOG1221|consen 89 SEPDLGISESDLRTLA-------DEVNIVIHSAATVR-------FDEPLDVALGINTRGTRNVLQLAKEMVKLK------ 148 (467)
T ss_pred cCcccCCChHHHHHHH-------hcCCEEEEeeeeec-------cchhhhhhhhhhhHhHHHHHHHHHHhhhhh------
Confidence 864 3333222 37999999998532 236678889999999999999988776643
Q ss_pred CCCCcEEEEecccccccC--------CC--------------------------------CchhhHHHHHHHHHHHHHHH
Q 022386 145 SSSGGIIINISATLHYTA--------TW--------------------------------YQIHVSAAKAAVDSITRSLA 184 (298)
Q Consensus 145 ~~~~g~iv~vss~~~~~~--------~~--------------------------------~~~~Y~~sK~a~~~l~~~la 184 (298)
.++.+|+.-.... ++ ....|.-+|+-.+.++..-
T Consensus 149 -----~~vhVSTAy~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~- 222 (467)
T KOG1221|consen 149 -----ALVHVSTAYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKE- 222 (467)
T ss_pred -----eEEEeehhheecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhh-
Confidence 3888877554311 00 1124666666666666543
Q ss_pred HHhcCCCCeEEEEEeCCcccC
Q 022386 185 LEWGTDYAIRVNGIAPGPIKD 205 (298)
Q Consensus 185 ~e~~~~~girv~~i~PG~v~t 205 (298)
..++.+..+.|..|.+
T Consensus 223 -----~~~lPivIiRPsiI~s 238 (467)
T KOG1221|consen 223 -----AENLPLVIIRPSIITS 238 (467)
T ss_pred -----ccCCCeEEEcCCceec
Confidence 3467788899988853
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.1e-05 Score=72.63 Aligned_cols=174 Identities=17% Similarity=0.103 Sum_probs=102.7
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHH-HHHhCCCCeEEEEccCCCHHH-HHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVA-ALHSLGIPAIGLEGDVRKRED-AVRVVES 82 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dls~~~~-~~~~~~~ 82 (298)
.+.-..+-.+|+|+||||++|+-+++.|.++|+.|.++-|+.++.++... ...+.+ ...+..|.....+ ...+++.
T Consensus 72 ~~~~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~--~~~v~~~~~~~~d~~~~~~~~ 149 (411)
T KOG1203|consen 72 PNNNSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLG--LQNVEADVVTAIDILKKLVEA 149 (411)
T ss_pred CCCCCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccc--cceeeeccccccchhhhhhhh
Confidence 44456667899999999999999999999999999999999876666555 111222 2223334443333 3333332
Q ss_pred HHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC
Q 022386 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (298)
Q Consensus 83 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~ 162 (298)
+. -...+++-++|.-.... +..-..++...|..++++++...-. .++|.++++.+...
T Consensus 150 ~~---~~~~~v~~~~ggrp~~e-------d~~~p~~VD~~g~knlvdA~~~aGv------------k~~vlv~si~~~~~ 207 (411)
T KOG1203|consen 150 VP---KGVVIVIKGAGGRPEEE-------DIVTPEKVDYEGTKNLVDACKKAGV------------KRVVLVGSIGGTKF 207 (411)
T ss_pred cc---ccceeEEecccCCCCcc-------cCCCcceecHHHHHHHHHHHHHhCC------------ceEEEEEeecCccc
Confidence 21 13456667776433221 1122234666788888888843332 34999988877655
Q ss_pred CCCchhhHHHHHHHHHHH-HHHHHHhcCCCCeEEEEEeCCcccC
Q 022386 163 TWYQIHVSAAKAAVDSIT-RSLALEWGTDYAIRVNGIAPGPIKD 205 (298)
Q Consensus 163 ~~~~~~Y~~sK~a~~~l~-~~la~e~~~~~girv~~i~PG~v~t 205 (298)
......+.. .+...-. +.....+. ..|+.-..|.||....
T Consensus 208 ~~~~~~~~~--~~~~~~~k~~~e~~~~-~Sgl~ytiIR~g~~~~ 248 (411)
T KOG1203|consen 208 NQPPNILLL--NGLVLKAKLKAEKFLQ-DSGLPYTIIRPGGLEQ 248 (411)
T ss_pred CCCchhhhh--hhhhhHHHHhHHHHHH-hcCCCcEEEecccccc
Confidence 443333331 1111111 12222233 5588889999998764
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=98.23 E-value=1.4e-05 Score=61.65 Aligned_cols=78 Identities=24% Similarity=0.377 Sum_probs=59.6
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCc-EEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.++++++++|.|+ ||.|++++..|++.|++ |.++.|+.++.+++.+.+. +..+.++. +.+.. ..+
T Consensus 8 ~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~--~~~~~~~~--~~~~~---~~~------ 73 (135)
T PF01488_consen 8 GDLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFG--GVNIEAIP--LEDLE---EAL------ 73 (135)
T ss_dssp STGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHT--GCSEEEEE--GGGHC---HHH------
T ss_pred CCcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcC--ccccceee--HHHHH---HHH------
Confidence 4789999999997 89999999999999996 9999999999888888882 22344443 33322 222
Q ss_pred hCCccEEEECCCCC
Q 022386 87 FGKLDILVNAAAGN 100 (298)
Q Consensus 87 ~~~id~li~~ag~~ 100 (298)
...|++|++.+..
T Consensus 74 -~~~DivI~aT~~~ 86 (135)
T PF01488_consen 74 -QEADIVINATPSG 86 (135)
T ss_dssp -HTESEEEE-SSTT
T ss_pred -hhCCeEEEecCCC
Confidence 3799999998753
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.13 E-value=7.1e-06 Score=67.96 Aligned_cols=218 Identities=17% Similarity=0.102 Sum_probs=134.8
Q ss_pred CCCC-cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHH-HHHHHH-----hCCCCeEEEEccCCCHHHHHHHHH
Q 022386 9 ILKG-KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRS-AVAALH-----SLGIPAIGLEGDVRKREDAVRVVE 81 (298)
Q Consensus 9 ~l~g-k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~-~~~~~~-----~~~~~~~~~~~Dls~~~~~~~~~~ 81 (298)
..+. |++||||-||-=|..++..|+.+|+.|+-+-|+++...- -++.+. ..++.....-.|++|..++.+++.
T Consensus 24 ~~r~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~ 103 (376)
T KOG1372|consen 24 AFRPRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLIS 103 (376)
T ss_pred CcccceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHh
Confidence 4444 599999999999999999999999999987776543222 233332 235667788899999999999998
Q ss_pred HHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc-
Q 022386 82 STINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY- 160 (298)
Q Consensus 82 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~- 160 (298)
.+ +++-+.|.|+....+-. -+--+.+-++...|++.++.++...-...+ -++ +-.|....
T Consensus 104 ~i-----kPtEiYnLaAQSHVkvS----FdlpeYTAeVdavGtLRlLdAi~~c~l~~~---------Vrf-YQAstSEly 164 (376)
T KOG1372|consen 104 TI-----KPTEVYNLAAQSHVKVS----FDLPEYTAEVDAVGTLRLLDAIRACRLTEK---------VRF-YQASTSELY 164 (376)
T ss_pred cc-----CchhhhhhhhhcceEEE----eecccceeeccchhhhhHHHHHHhcCcccc---------eeE-EecccHhhc
Confidence 77 57778888876543211 111234556788899999988877544322 112 22222222
Q ss_pred -----------cCCCCchhhHHHHHHHHHHHHHHHHHhc--CCCCeEEEEEeCCcccCCcccCcCChHHHHH--------
Q 022386 161 -----------TATWYQIHVSAAKAAVDSITRSLALEWG--TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS-------- 219 (298)
Q Consensus 161 -----------~~~~~~~~Y~~sK~a~~~l~~~la~e~~--~~~girv~~i~PG~v~t~~~~~~~~~~~~~~-------- 219 (298)
.|..+.+.|+++|.+-.-++-.+...+. .-.||-.|.=+|.-= +.+-..........
T Consensus 165 Gkv~e~PQsE~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRG--enFVTRKItRsvakI~~gqqe~ 242 (376)
T KOG1372|consen 165 GKVQEIPQSETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRG--ENFVTRKITRSVAKISLGQQEK 242 (376)
T ss_pred ccccCCCcccCCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccc--cchhhHHHHHHHHHhhhcceee
Confidence 2334578899999887776666655442 133555555455311 11111000111100
Q ss_pred -HHhhhccCCCCCCHHHHHHHHHHhcCCC
Q 022386 220 -KATDYMAAYKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 220 -~~~~~~~~~~~~~~~dva~~~~~L~s~~ 247 (298)
.+.+....+.|+.+.|-.++++.++..+
T Consensus 243 ~~LGNL~a~RDWGhA~dYVEAMW~mLQ~d 271 (376)
T KOG1372|consen 243 IELGNLSALRDWGHAGDYVEAMWLMLQQD 271 (376)
T ss_pred EEecchhhhcccchhHHHHHHHHHHHhcC
Confidence 0112234567889999999998888643
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=98.13 E-value=1.6e-05 Score=73.98 Aligned_cols=77 Identities=26% Similarity=0.401 Sum_probs=59.7
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh-hHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
+|++|+++|+|+++ +|.++|+.|+++|++|++++++. +..++..+++...+ +.++.+|..+ +..
T Consensus 2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~--~~~~~~~~~~------------~~~ 66 (450)
T PRK14106 2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELG--IELVLGEYPE------------EFL 66 (450)
T ss_pred CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC--CEEEeCCcch------------hHh
Confidence 57899999999888 99999999999999999999975 34444455554444 5567777775 123
Q ss_pred CCccEEEECCCCC
Q 022386 88 GKLDILVNAAAGN 100 (298)
Q Consensus 88 ~~id~li~~ag~~ 100 (298)
+.+|++|+++|..
T Consensus 67 ~~~d~vv~~~g~~ 79 (450)
T PRK14106 67 EGVDLVVVSPGVP 79 (450)
T ss_pred hcCCEEEECCCCC
Confidence 5799999999864
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=98.10 E-value=1.6e-05 Score=72.53 Aligned_cols=75 Identities=21% Similarity=0.350 Sum_probs=59.4
Q ss_pred EEEecCCchhHHHHHHHHHHcCC--cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 15 ALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 15 ~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
|+|.|+ |.+|+.+++.|++++. +|++.+|+.++++++.+.+ .+.++.++++|+.|.++++++++ ..|+
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~~-------~~dv 70 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL--LGDRVEAVQVDVNDPESLAELLR-------GCDV 70 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT----TTTTEEEEE--TTTHHHHHHHHT-------TSSE
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc--cccceeEEEEecCCHHHHHHHHh-------cCCE
Confidence 689999 9999999999999875 7999999998877776655 45679999999999999888876 5699
Q ss_pred EEECCCC
Q 022386 93 LVNAAAG 99 (298)
Q Consensus 93 li~~ag~ 99 (298)
+||++|.
T Consensus 71 Vin~~gp 77 (386)
T PF03435_consen 71 VINCAGP 77 (386)
T ss_dssp EEE-SSG
T ss_pred EEECCcc
Confidence 9999984
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.09 E-value=1.8e-05 Score=71.00 Aligned_cols=76 Identities=22% Similarity=0.382 Sum_probs=64.5
Q ss_pred cEEEEecCCchhHHHHHHHHHHcC-CcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
+.+||.|+ |++|+.+|..|+++| .+|++.+|+.+++.+..+.. +.++.++++|+.+.+.+.++++ ..|
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~---~~~v~~~~vD~~d~~al~~li~-------~~d 70 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI---GGKVEALQVDAADVDALVALIK-------DFD 70 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc---cccceeEEecccChHHHHHHHh-------cCC
Confidence 57899999 999999999999999 69999999987777665543 3479999999999999988887 349
Q ss_pred EEEECCCC
Q 022386 92 ILVNAAAG 99 (298)
Q Consensus 92 ~li~~ag~ 99 (298)
++||++..
T Consensus 71 ~VIn~~p~ 78 (389)
T COG1748 71 LVINAAPP 78 (389)
T ss_pred EEEEeCCc
Confidence 99999863
|
|
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.03 E-value=7.3e-06 Score=68.93 Aligned_cols=84 Identities=30% Similarity=0.344 Sum_probs=51.2
Q ss_pred CCCcEEEEecCC----------------chhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCH
Q 022386 10 LKGKVALLTGGG----------------SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR 73 (298)
Q Consensus 10 l~gk~~lVtG~t----------------~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 73 (298)
|+||++|||+|. |.+|.++|++|+++|+.|++++........ .+. .+..+..+.. .
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~~-~~~~~~~V~s----~ 72 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DIN-NQLELHPFEG----I 72 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---ccC-CceeEEEEec----H
Confidence 579999999885 999999999999999999988764321110 000 0112223332 1
Q ss_pred HHHHHHHHHHHHHhCCccEEEECCCCCCC
Q 022386 74 EDAVRVVESTINHFGKLDILVNAAAGNFL 102 (298)
Q Consensus 74 ~~~~~~~~~~~~~~~~id~li~~ag~~~~ 102 (298)
.+....+.++... ..+|++||+|+....
T Consensus 73 ~d~~~~l~~~~~~-~~~D~VIH~AAvsD~ 100 (229)
T PRK09620 73 IDLQDKMKSIITH-EKVDAVIMAAAGSDW 100 (229)
T ss_pred HHHHHHHHHHhcc-cCCCEEEECccccce
Confidence 1222222222211 368999999997543
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.02 E-value=5.8e-05 Score=66.74 Aligned_cols=160 Identities=14% Similarity=0.108 Sum_probs=99.2
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCC--cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
..++++|||++|.+|..++..|+.++. .+++++.+. .+...-++.+...... ..++++.+++...+ .
T Consensus 17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~~~~~~--i~~~~~~~d~~~~l-------~ 85 (323)
T PLN00106 17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHINTPAQ--VRGFLGDDQLGDAL-------K 85 (323)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhCCcCce--EEEEeCCCCHHHHc-------C
Confidence 356899999999999999999997766 699999876 2222223433322221 12333333333333 4
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc----c----
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH----Y---- 160 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~----~---- 160 (298)
..|++|+.||.... + . ..+.+.+..|+.....+.+.+..+-. .+.++++|.... .
T Consensus 86 ~aDiVVitAG~~~~-~--g---~~R~dll~~N~~i~~~i~~~i~~~~p-----------~aivivvSNPvD~~~~i~t~~ 148 (323)
T PLN00106 86 GADLVIIPAGVPRK-P--G---MTRDDLFNINAGIVKTLCEAVAKHCP-----------NALVNIISNPVNSTVPIAAEV 148 (323)
T ss_pred CCCEEEEeCCCCCC-C--C---CCHHHHHHHHHHHHHHHHHHHHHHCC-----------CeEEEEeCCCccccHHHHHHH
Confidence 89999999996432 1 1 23566677888776665555554432 355666666653 1
Q ss_pred ----cCCCCchhhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEE
Q 022386 161 ----TATWYQIHVSAAKAAVDSITRSLALEWG-TDYAIRVNGI 198 (298)
Q Consensus 161 ----~~~~~~~~Y~~sK~a~~~l~~~la~e~~-~~~girv~~i 198 (298)
.+.+..-.|+.++.-...|-..++.++. .+..|+...|
T Consensus 149 ~~~~s~~p~~~viG~~~LDs~Rl~~~lA~~lgv~~~~V~~~Vi 191 (323)
T PLN00106 149 LKKAGVYDPKKLFGVTTLDVVRANTFVAEKKGLDPADVDVPVV 191 (323)
T ss_pred HHHcCCCCcceEEEEecchHHHHHHHHHHHhCCChhheEEEEE
Confidence 2344556788887777778888888885 2334444444
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.01 E-value=0.00032 Score=55.81 Aligned_cols=187 Identities=13% Similarity=0.013 Sum_probs=116.6
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
+.+.|.|+||-.|..|++...++|+.|+.+.|+..+.... ..+..++.|+.|++++.+.+. ..|+
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~--------~~~~i~q~Difd~~~~a~~l~-------g~Da 65 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR--------QGVTILQKDIFDLTSLASDLA-------GHDA 65 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc--------ccceeecccccChhhhHhhhc-------CCce
Confidence 3678999999999999999999999999999998765432 235678899999998866554 8999
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC--------
Q 022386 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-------- 164 (298)
Q Consensus 93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~-------- 164 (298)
+|..-|..... .+. . +....+++...++... ..+++.|+...+..-.+
T Consensus 66 VIsA~~~~~~~------~~~--~--------~~k~~~~li~~l~~ag--------v~RllVVGGAGSL~id~g~rLvD~p 121 (211)
T COG2910 66 VISAFGAGASD------NDE--L--------HSKSIEALIEALKGAG--------VPRLLVVGGAGSLEIDEGTRLVDTP 121 (211)
T ss_pred EEEeccCCCCC------hhH--H--------HHHHHHHHHHHHhhcC--------CeeEEEEcCccceEEcCCceeecCC
Confidence 99988754321 111 1 1112566666666544 46788887766653221
Q ss_pred --CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC--hHHHHHHHhhhccCCCCCCHHHHHHHH
Q 022386 165 --YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDYMAAYKFGEKWDIAMAA 240 (298)
Q Consensus 165 --~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~ 240 (298)
+-.-|..+++. .-+...|..+ .++.-.-++|..+..|..+...- ..+ .+..........+.+|.|-++
T Consensus 122 ~fP~ey~~~A~~~-ae~L~~Lr~~----~~l~WTfvSPaa~f~PGerTg~yrlggD---~ll~n~~G~SrIS~aDYAiA~ 193 (211)
T COG2910 122 DFPAEYKPEALAQ-AEFLDSLRAE----KSLDWTFVSPAAFFEPGERTGNYRLGGD---QLLVNAKGESRISYADYAIAV 193 (211)
T ss_pred CCchhHHHHHHHH-HHHHHHHhhc----cCcceEEeCcHHhcCCccccCceEeccc---eEEEcCCCceeeeHHHHHHHH
Confidence 22233444433 3333444444 35888999998776553222110 000 011111222456888888888
Q ss_pred HHhcCC
Q 022386 241 LYLASD 246 (298)
Q Consensus 241 ~~L~s~ 246 (298)
+--+..
T Consensus 194 lDe~E~ 199 (211)
T COG2910 194 LDELEK 199 (211)
T ss_pred HHHHhc
Confidence 776644
|
|
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.98 E-value=2.9e-05 Score=67.66 Aligned_cols=80 Identities=15% Similarity=0.181 Sum_probs=69.3
Q ss_pred EEEEecCCchhHHHHHHHHHH----cCCcEEEEcCChhHHHHHHHHHHhCCC----CeEEEEccCCCHHHHHHHHHHHHH
Q 022386 14 VALLTGGGSGIGFEISLQLGK----HGAAIAIMGRRKTVLRSAVAALHSLGI----PAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~----~G~~Vv~~~r~~~~~~~~~~~~~~~~~----~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
-++|-||||.-|..+++.+.+ .|..+.+.+|+.+++++..+.+.+..+ ....+.||.+|++++.++++
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak---- 82 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAK---- 82 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHh----
Confidence 578999999999999999999 788999999999999999999987653 23377899999999999988
Q ss_pred HhCCccEEEECCCCC
Q 022386 86 HFGKLDILVNAAAGN 100 (298)
Q Consensus 86 ~~~~id~li~~ag~~ 100 (298)
+..++|||+|..
T Consensus 83 ---~~~vivN~vGPy 94 (423)
T KOG2733|consen 83 ---QARVIVNCVGPY 94 (423)
T ss_pred ---hhEEEEeccccc
Confidence 456899999843
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=5.1e-05 Score=67.26 Aligned_cols=73 Identities=21% Similarity=0.271 Sum_probs=54.7
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHc-CC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKH-GA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~-G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
+|++|+++||||+|.||..+|++|+++ |. .+++++|+...+..+..++.. .|+. ++. +.
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~---------~~i~---~l~-------~~ 212 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG---------GKIL---SLE-------EA 212 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc---------ccHH---hHH-------HH
Confidence 789999999999999999999999864 64 799999987777766555421 1222 122 23
Q ss_pred hCCccEEEECCCCC
Q 022386 87 FGKLDILVNAAAGN 100 (298)
Q Consensus 87 ~~~id~li~~ag~~ 100 (298)
+...|++|+.++..
T Consensus 213 l~~aDiVv~~ts~~ 226 (340)
T PRK14982 213 LPEADIVVWVASMP 226 (340)
T ss_pred HccCCEEEECCcCC
Confidence 35799999999853
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.90 E-value=6.5e-05 Score=66.39 Aligned_cols=113 Identities=14% Similarity=0.097 Sum_probs=73.0
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcC--CcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES 82 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~ 82 (298)
|.++.++.+.++|+|++|.+|..++..|+.++ ..+++++++ ..+...-++.+.... ....+.++..+..+.+
T Consensus 1 ~~~~~~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~--~~~g~a~Dl~~~~~~--~~v~~~td~~~~~~~l-- 74 (321)
T PTZ00325 1 MRPSALKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIV--GAPGVAADLSHIDTP--AKVTGYADGELWEKAL-- 74 (321)
T ss_pred CCCcCCCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecC--CCcccccchhhcCcC--ceEEEecCCCchHHHh--
Confidence 45677788899999999999999999999665 479999983 222323344443332 2233555544432322
Q ss_pred HHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHH
Q 022386 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 134 (298)
Q Consensus 83 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 134 (298)
...|++|+++|.... + . +.+...+..|+...-.+.+.+..+
T Consensus 75 -----~gaDvVVitaG~~~~-~--~---~tR~dll~~N~~i~~~i~~~i~~~ 115 (321)
T PTZ00325 75 -----RGADLVLICAGVPRK-P--G---MTRDDLFNTNAPIVRDLVAAVASS 115 (321)
T ss_pred -----CCCCEEEECCCCCCC-C--C---CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 379999999996321 1 1 234566788887766666665554
|
|
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00016 Score=58.63 Aligned_cols=79 Identities=24% Similarity=0.335 Sum_probs=49.6
Q ss_pred CCCcEEEEecC----------------CchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCH
Q 022386 10 LKGKVALLTGG----------------GSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR 73 (298)
Q Consensus 10 l~gk~~lVtG~----------------t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 73 (298)
|+||++|||+| ||..|.++|+.+..+|+.|+++..... ... ...+..+ ++.
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~--------p~~~~~i--~v~-- 67 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP--------PPGVKVI--RVE-- 67 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS-------------TTEEEE--E-S--
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc--------cccceEE--Eec--
Confidence 67999999976 578999999999999999999877642 110 1234444 344
Q ss_pred HHHHHHHHHHHHHhCCccEEEECCCCCCC
Q 022386 74 EDAVRVVESTINHFGKLDILVNAAAGNFL 102 (298)
Q Consensus 74 ~~~~~~~~~~~~~~~~id~li~~ag~~~~ 102 (298)
+.+.+++.+.+.+..-|++|++|+....
T Consensus 68 -sa~em~~~~~~~~~~~Di~I~aAAVsDf 95 (185)
T PF04127_consen 68 -SAEEMLEAVKELLPSADIIIMAAAVSDF 95 (185)
T ss_dssp -SHHHHHHHHHHHGGGGSEEEE-SB--SE
T ss_pred -chhhhhhhhccccCcceeEEEecchhhe
Confidence 4555555555666667999999997543
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.71 E-value=7.7e-05 Score=69.42 Aligned_cols=81 Identities=17% Similarity=0.248 Sum_probs=55.5
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
+++||+++|||+++ +|+++|+.|+++|++|++.+++........+.+...+.++ .... +...+ .+ .
T Consensus 2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~--~~~~--~~~~~---~~------~ 67 (447)
T PRK02472 2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKV--ICGS--HPLEL---LD------E 67 (447)
T ss_pred CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEE--EeCC--CCHHH---hc------C
Confidence 47899999999986 9999999999999999999887544444445565544332 2111 11111 11 1
Q ss_pred CccEEEECCCCCCCC
Q 022386 89 KLDILVNAAAGNFLV 103 (298)
Q Consensus 89 ~id~li~~ag~~~~~ 103 (298)
.+|.+|+++|+....
T Consensus 68 ~~d~vV~s~gi~~~~ 82 (447)
T PRK02472 68 DFDLMVKNPGIPYTN 82 (447)
T ss_pred cCCEEEECCCCCCCC
Confidence 489999999976443
|
|
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00029 Score=55.46 Aligned_cols=77 Identities=23% Similarity=0.374 Sum_probs=56.4
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcC-CcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
++++++++|+|+ |++|.++++.|.+.| ..|++++|+.+..++..+.+.... +..+.++.++. .
T Consensus 16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~~----------~ 79 (155)
T cd01065 16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-----IAIAYLDLEEL----------L 79 (155)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-----cceeecchhhc----------c
Confidence 467899999998 899999999999996 689999999887777666654321 22333443322 2
Q ss_pred CCccEEEECCCCCC
Q 022386 88 GKLDILVNAAAGNF 101 (298)
Q Consensus 88 ~~id~li~~ag~~~ 101 (298)
...|++|++.....
T Consensus 80 ~~~Dvvi~~~~~~~ 93 (155)
T cd01065 80 AEADLIINTTPVGM 93 (155)
T ss_pred ccCCEEEeCcCCCC
Confidence 47999999997543
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00052 Score=59.43 Aligned_cols=75 Identities=17% Similarity=0.297 Sum_probs=56.1
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
.++|+++|+|+ ||+|++++..|++.|++|.+++|+.++.+++.+.+...+. +.....| +. ....
T Consensus 115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~-~~~~~~~-----~~---------~~~~ 178 (270)
T TIGR00507 115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGE-IQAFSMD-----EL---------PLHR 178 (270)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCc-eEEechh-----hh---------cccC
Confidence 56899999998 6999999999999999999999998888888777754332 2222111 10 1246
Q ss_pred ccEEEECCCCC
Q 022386 90 LDILVNAAAGN 100 (298)
Q Consensus 90 id~li~~ag~~ 100 (298)
.|++||+.+..
T Consensus 179 ~DivInatp~g 189 (270)
T TIGR00507 179 VDLIINATSAG 189 (270)
T ss_pred ccEEEECCCCC
Confidence 89999999864
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00032 Score=60.99 Aligned_cols=76 Identities=28% Similarity=0.389 Sum_probs=55.8
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcC-CcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
++.+|+++|+|+ ||+|++++..|++.| .+|++++|+.++.+++.+.+.... .+.+ ++ +. .+..
T Consensus 120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~-~~~~---~~----~~-------~~~~ 183 (278)
T PRK00258 120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG-KAEL---DL----EL-------QEEL 183 (278)
T ss_pred CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc-ceee---cc----cc-------hhcc
Confidence 688999999997 899999999999999 589999999888887777664321 1111 11 11 1122
Q ss_pred CCccEEEECCCCC
Q 022386 88 GKLDILVNAAAGN 100 (298)
Q Consensus 88 ~~id~li~~ag~~ 100 (298)
...|++||+....
T Consensus 184 ~~~DivInaTp~g 196 (278)
T PRK00258 184 ADFDLIINATSAG 196 (278)
T ss_pred ccCCEEEECCcCC
Confidence 4789999998653
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.0012 Score=72.51 Aligned_cols=179 Identities=13% Similarity=0.083 Sum_probs=111.6
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
.+.++.++|++..++++.+++..|.++|+.|+++..... ...........+..+.+.--+..++..+++.+....+
T Consensus 1752 ~~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1827 (2582)
T TIGR02813 1752 KQSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWV----VSHSASPLASAIASVTLGTIDDTSIEAVIKDIEEKTA 1827 (2582)
T ss_pred cccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeecccc----ccccccccccccccccccccchHHHHHHHHhhhcccc
Confidence 456888999988999999999999999999888742211 0000000111222334455566788888888877778
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchh
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~ 168 (298)
.++.+||........ ....+...+...-...+...|.+.|.+.+.+.... ++.++.++...+..++.....
T Consensus 1828 ~~~g~i~l~~~~~~~-~~~~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~~--------~~~~~~vsr~~G~~g~~~~~~ 1898 (2582)
T TIGR02813 1828 QIDGFIHLQPQHKSV-ADKVDAIELPEAAKQSLMLAFLFAKLLNVKLATNA--------RASFVTVSRIDGGFGYSNGDA 1898 (2582)
T ss_pred ccceEEEeccccccc-cccccccccchhhHHHHHHHHHHHHhhchhhccCC--------CeEEEEEEecCCccccCCccc
Confidence 999999987743210 00000001111112334456677777666655432 578999988876655532221
Q ss_pred h--------HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCC
Q 022386 169 V--------SAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 201 (298)
Q Consensus 169 Y--------~~sK~a~~~l~~~la~e~~~~~girv~~i~PG 201 (298)
. ....+++.+|+|+++.||. ...+|...+.|.
T Consensus 1899 ~~~~~~~~~~~~~a~l~Gl~Ktl~~E~P-~~~~r~vDl~~~ 1938 (2582)
T TIGR02813 1899 DSGTQQVKAELNQAALAGLTKTLNHEWN-AVFCRALDLAPK 1938 (2582)
T ss_pred cccccccccchhhhhHHHHHHhHHHHCC-CCeEEEEeCCCC
Confidence 1 2357899999999999996 555666666664
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.0011 Score=58.13 Aligned_cols=79 Identities=19% Similarity=0.235 Sum_probs=54.9
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|++++|+|+++++|.++++.+...|++|++++++.++.+.. .+.+.+. .+|..+.+..+.+.+... ...+
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~---~~~~~~~~~~~~~~~~~~--~~~~ 214 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV----RQAGADA---VFNYRAEDLADRILAATA--GQGV 214 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCCCE---EEeCCCcCHHHHHHHHcC--CCce
Confidence 589999999999999999999999999999998886554443 2233321 234555444444333221 1379
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|.++++++
T Consensus 215 d~vi~~~~ 222 (325)
T cd08253 215 DVIIEVLA 222 (325)
T ss_pred EEEEECCc
Confidence 99999986
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00061 Score=56.32 Aligned_cols=231 Identities=16% Similarity=0.123 Sum_probs=135.5
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHc-CCc-EEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKH-GAA-IAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~-G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
+...+||||+-|-+|..+|+-|..+ |-. |++.+-.... +...+.|+ ++-.|+-|..++++.+-. .
T Consensus 43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp-----~~V~~~GP---yIy~DILD~K~L~eIVVn-----~ 109 (366)
T KOG2774|consen 43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPP-----ANVTDVGP---YIYLDILDQKSLEEIVVN-----K 109 (366)
T ss_pred CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCc-----hhhcccCC---chhhhhhccccHHHhhcc-----c
Confidence 4568999999999999999999754 764 5554433211 11112221 345688888877776542 4
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEe-cccccccCC----
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI-SATLHYTAT---- 163 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~v-ss~~~~~~~---- 163 (298)
+||-+||-.+....- ......-..++|+.|..++++.+..+-. -+|+ |.+.++.+.
T Consensus 110 RIdWL~HfSALLSAv-----GE~NVpLA~~VNI~GvHNil~vAa~~kL--------------~iFVPSTIGAFGPtSPRN 170 (366)
T KOG2774|consen 110 RIDWLVHFSALLSAV-----GETNVPLALQVNIRGVHNILQVAAKHKL--------------KVFVPSTIGAFGPTSPRN 170 (366)
T ss_pred ccceeeeHHHHHHHh-----cccCCceeeeecchhhhHHHHHHHHcCe--------------eEeecccccccCCCCCCC
Confidence 899999987642110 1111223467999999999988876543 3344 444444332
Q ss_pred --C------CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEE-eCCcccCCcccCcC---ChHHHHHHHhh---hccCC
Q 022386 164 --W------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI-APGPIKDTAGVSKL---APEEIRSKATD---YMAAY 228 (298)
Q Consensus 164 --~------~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i-~PG~v~t~~~~~~~---~~~~~~~~~~~---~~~~~ 228 (298)
| +...|++||.-.+.+-+.+...+ |+...++ -||.+..+.-.... ...-+.+...+ ..+++
T Consensus 171 PTPdltIQRPRTIYGVSKVHAEL~GEy~~hrF----g~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylr 246 (366)
T KOG2774|consen 171 PTPDLTIQRPRTIYGVSKVHAELLGEYFNHRF----GVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLR 246 (366)
T ss_pred CCCCeeeecCceeechhHHHHHHHHHHHHhhc----CccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccC
Confidence 1 35689999999888888776666 4555555 47766532111111 11111111111 01111
Q ss_pred -----CCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhh
Q 022386 229 -----KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVE 283 (298)
Q Consensus 229 -----~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~ 283 (298)
.+..-+|.-.++..++..++..+.-.++++.|= ..+||++..++++...
T Consensus 247 pdtrlpmmy~~dc~~~~~~~~~a~~~~lkrr~ynvt~~------sftpee~~~~~~~~~p 300 (366)
T KOG2774|consen 247 PDTRLPMMYDTDCMASVIQLLAADSQSLKRRTYNVTGF------SFTPEEIADAIRRVMP 300 (366)
T ss_pred CCccCceeehHHHHHHHHHHHhCCHHHhhhheeeecee------ccCHHHHHHHHHhhCC
Confidence 133456776666666656667777788888654 2346777776665543
|
|
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0026 Score=56.36 Aligned_cols=80 Identities=26% Similarity=0.304 Sum_probs=57.4
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
..+++++|+|+++++|.+++..+...|++|++++++.++.+.+ ...+.. ...|..+.+..+.+.+.... .+
T Consensus 165 ~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~~~~---~~~~~~~~~~~~~~~~~~~~--~~ 235 (342)
T cd08266 165 RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA----KELGAD---YVIDYRKEDFVREVRELTGK--RG 235 (342)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCCC---eEEecCChHHHHHHHHHhCC--CC
Confidence 3578999999999999999999999999999998887654433 222322 12366665555555443322 47
Q ss_pred ccEEEECCC
Q 022386 90 LDILVNAAA 98 (298)
Q Consensus 90 id~li~~ag 98 (298)
+|++++++|
T Consensus 236 ~d~~i~~~g 244 (342)
T cd08266 236 VDVVVEHVG 244 (342)
T ss_pred CcEEEECCc
Confidence 999999987
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00045 Score=57.01 Aligned_cols=48 Identities=23% Similarity=0.412 Sum_probs=41.6
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA 55 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~ 55 (298)
..+|+||+++|+|.. .+|+.+++.|.+.|++|++++++.+..++..+.
T Consensus 23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~ 70 (200)
T cd01075 23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAEL 70 (200)
T ss_pred CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence 568999999999996 899999999999999999999987766665543
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0022 Score=55.90 Aligned_cols=77 Identities=18% Similarity=0.145 Sum_probs=56.4
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
++++|+++|.|+ ||.|++++..|++.|+ +|++++|+.++.+++++.+.+....+..... +++.. ..
T Consensus 124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~-----~~~~~-------~~ 190 (284)
T PRK12549 124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAG-----SDLAA-------AL 190 (284)
T ss_pred CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEec-----cchHh-------hh
Confidence 577899999987 7799999999999998 6999999999888888887654333332221 11111 12
Q ss_pred CCccEEEECCC
Q 022386 88 GKLDILVNAAA 98 (298)
Q Consensus 88 ~~id~li~~ag 98 (298)
...|++||+..
T Consensus 191 ~~aDiVInaTp 201 (284)
T PRK12549 191 AAADGLVHATP 201 (284)
T ss_pred CCCCEEEECCc
Confidence 46899999964
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00076 Score=59.92 Aligned_cols=120 Identities=14% Similarity=0.187 Sum_probs=67.5
Q ss_pred cEEEEecCCchhHHHHHHHHHHcC-------CcEEEEcCChh--HHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHH
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHG-------AAIAIMGRRKT--VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G-------~~Vv~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
-.++|||++|.+|.+++..|+..+ ..|++++++.. .++...-++.+.. .....|++...+.
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~---~~~~~~~~~~~~~------- 72 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCA---FPLLKSVVATTDP------- 72 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhcc---ccccCCceecCCH-------
Confidence 368999999999999999999854 57999998643 1221111111100 0011133222222
Q ss_pred HHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccc
Q 022386 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~ 158 (298)
.+.+...|++||.||..... ..+. .+.++.|+. +++.+.+.+.+... ..+.++.++...
T Consensus 73 ~~~l~~aDiVI~tAG~~~~~---~~~R---~~l~~~N~~----i~~~i~~~i~~~~~------~~~iiivvsNPv 131 (325)
T cd01336 73 EEAFKDVDVAILVGAMPRKE---GMER---KDLLKANVK----IFKEQGEALDKYAK------KNVKVLVVGNPA 131 (325)
T ss_pred HHHhCCCCEEEEeCCcCCCC---CCCH---HHHHHHHHH----HHHHHHHHHHHhCC------CCeEEEEecCcH
Confidence 22335899999999964321 2233 334455544 55666666655421 146677777644
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0026 Score=56.23 Aligned_cols=118 Identities=12% Similarity=0.092 Sum_probs=63.0
Q ss_pred cEEEEecCCchhHHHHHHHHHH-c--CCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 13 KVALLTGGGSGIGFEISLQLGK-H--GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~-~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
+.++|.||+|++|.+++..|.. . +..+++++++.. .....-++.+.........++-. ++ .+.+..
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~~~~~~i~~~~~~---d~-------~~~l~~ 69 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHIPTAVKIKGFSGE---DP-------TPALEG 69 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcCCCCceEEEeCCC---CH-------HHHcCC
Confidence 4689999999999999998865 3 346788888743 11111122221111111111111 11 112246
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccc
Q 022386 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (298)
Q Consensus 90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~ 158 (298)
.|++|.++|..... ..+. ...+..|....-.+.+. |.+... .+.+++++...
T Consensus 70 ~DiVIitaG~~~~~---~~~R---~dll~~N~~i~~~ii~~----i~~~~~-------~~ivivvsNP~ 121 (312)
T PRK05086 70 ADVVLISAGVARKP---GMDR---SDLFNVNAGIVKNLVEK----VAKTCP-------KACIGIITNPV 121 (312)
T ss_pred CCEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHH----HHHhCC-------CeEEEEccCch
Confidence 99999999964321 1233 33466666555555444 444321 34566666555
|
|
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0049 Score=55.82 Aligned_cols=76 Identities=18% Similarity=0.214 Sum_probs=54.4
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
+.++.++|.|+ |.+|+.+++.+...|++|++++++.++++.+...+ +.. +..+..+.+.+.+.+ ..
T Consensus 165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~---g~~---v~~~~~~~~~l~~~l-------~~ 230 (370)
T TIGR00518 165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF---GGR---IHTRYSNAYEIEDAV-------KR 230 (370)
T ss_pred CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc---Cce---eEeccCCHHHHHHHH-------cc
Confidence 56788999977 78999999999999999999999876655543333 221 223455555544433 36
Q ss_pred ccEEEECCCC
Q 022386 90 LDILVNAAAG 99 (298)
Q Consensus 90 id~li~~ag~ 99 (298)
.|++|++++.
T Consensus 231 aDvVI~a~~~ 240 (370)
T TIGR00518 231 ADLLIGAVLI 240 (370)
T ss_pred CCEEEEcccc
Confidence 8999998864
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0049 Score=56.33 Aligned_cols=83 Identities=14% Similarity=0.211 Sum_probs=55.6
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
+.|+|||||++..+|..+++.|.++|++|++++.+..........+. ....+...-.+.+...+.+.++.++. ++
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d----~~~~~p~p~~d~~~~~~~L~~i~~~~-~i 77 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAVD----GFYTIPSPRWDPDAYIQALLSIVQRE-NI 77 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhhh----heEEeCCCCCCHHHHHHHHHHHHHHc-CC
Confidence 46899999999999999999999999999999888543332222221 12222222344554545555555553 58
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|++|-...
T Consensus 78 d~vIP~~e 85 (389)
T PRK06849 78 DLLIPTCE 85 (389)
T ss_pred CEEEECCh
Confidence 99988775
|
|
| >PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.00091 Score=63.43 Aligned_cols=48 Identities=23% Similarity=0.369 Sum_probs=42.3
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL 56 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~ 56 (298)
.++++|+++|+|+ ||+|++++..|+++|++|+++.|+.++.+++.+.+
T Consensus 375 ~~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l 422 (529)
T PLN02520 375 SPLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV 422 (529)
T ss_pred cCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence 3688999999999 69999999999999999999999987777776655
|
|
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0028 Score=55.23 Aligned_cols=79 Identities=18% Similarity=0.228 Sum_probs=55.6
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
++++|+++|.|+ ||.+++++..|++.|+ +|.++.|+.++.+++++.+.... .+.. +...+++. +..
T Consensus 122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~-~~~~----~~~~~~~~-------~~~ 188 (282)
T TIGR01809 122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVG-VITR----LEGDSGGL-------AIE 188 (282)
T ss_pred ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcC-ccee----ccchhhhh-------hcc
Confidence 578999999976 8999999999999998 69999999888888877764321 1111 11111221 112
Q ss_pred CCccEEEECCCCC
Q 022386 88 GKLDILVNAAAGN 100 (298)
Q Consensus 88 ~~id~li~~ag~~ 100 (298)
...|++||+....
T Consensus 189 ~~~DiVInaTp~g 201 (282)
T TIGR01809 189 KAAEVLVSTVPAD 201 (282)
T ss_pred cCCCEEEECCCCC
Confidence 4689999998753
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.006 Score=53.13 Aligned_cols=81 Identities=16% Similarity=0.168 Sum_probs=56.0
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
++++|+++|.|+ ||-+++++-.|++.|+ +|.++.|+.++.+++.+.+....+.......+. .++....
T Consensus 124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~~---~~~~~~~------- 192 (283)
T PRK14027 124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDA---RGIEDVI------- 192 (283)
T ss_pred CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecCH---hHHHHHH-------
Confidence 467899999997 8889999999999998 688999999888888877754322111111221 1121111
Q ss_pred CCccEEEECCCCC
Q 022386 88 GKLDILVNAAAGN 100 (298)
Q Consensus 88 ~~id~li~~ag~~ 100 (298)
...|++||+....
T Consensus 193 ~~~divINaTp~G 205 (283)
T PRK14027 193 AAADGVVNATPMG 205 (283)
T ss_pred hhcCEEEEcCCCC
Confidence 3589999988643
|
|
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0024 Score=58.61 Aligned_cols=75 Identities=17% Similarity=0.167 Sum_probs=55.1
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.++.+|+++|.|+ ||+|+.++++|+++|+ +++++.|+.++.+.+.+.+.. ...+ ..++. .+.
T Consensus 177 ~~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~----~~~~-----~~~~l-------~~~ 239 (414)
T PRK13940 177 DNISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN----ASAH-----YLSEL-------PQL 239 (414)
T ss_pred cCccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC----CeEe-----cHHHH-------HHH
Confidence 4688999999998 9999999999999997 699999998777776665521 1111 11222 222
Q ss_pred hCCccEEEECCCC
Q 022386 87 FGKLDILVNAAAG 99 (298)
Q Consensus 87 ~~~id~li~~ag~ 99 (298)
+...|++|++.+-
T Consensus 240 l~~aDiVI~aT~a 252 (414)
T PRK13940 240 IKKADIIIAAVNV 252 (414)
T ss_pred hccCCEEEECcCC
Confidence 3579999999974
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.00054 Score=54.19 Aligned_cols=157 Identities=15% Similarity=0.124 Sum_probs=95.5
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC--cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.|+++.++|.||||-.|..+.+++.+.+. .|+++.|+..-.. +.+..+.....|++..++....
T Consensus 15 ~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~-------at~k~v~q~~vDf~Kl~~~a~~------- 80 (238)
T KOG4039|consen 15 RMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDP-------ATDKVVAQVEVDFSKLSQLATN------- 80 (238)
T ss_pred hhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCc-------cccceeeeEEechHHHHHHHhh-------
Confidence 46778999999999999999999999876 6999999842111 1233455566787766554433
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
+..+|+++++-|....+. ..+.+ +.+.-.-.+.+.+++ ++++ -..++.+||..+.... .
T Consensus 81 ~qg~dV~FcaLgTTRgka----Gadgf---ykvDhDyvl~~A~~A----Ke~G--------ck~fvLvSS~GAd~sS--r 139 (238)
T KOG4039|consen 81 EQGPDVLFCALGTTRGKA----GADGF---YKVDHDYVLQLAQAA----KEKG--------CKTFVLVSSAGADPSS--R 139 (238)
T ss_pred hcCCceEEEeeccccccc----ccCce---EeechHHHHHHHHHH----HhCC--------CeEEEEEeccCCCccc--c
Confidence 348999999987532211 01111 112222222222322 2221 2358889987765433 2
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCc
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 207 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~ 207 (298)
-.|--.|.-++.=+..| .+ =++..+.||++..+.
T Consensus 140 FlY~k~KGEvE~~v~eL--~F-----~~~~i~RPG~ll~~R 173 (238)
T KOG4039|consen 140 FLYMKMKGEVERDVIEL--DF-----KHIIILRPGPLLGER 173 (238)
T ss_pred eeeeeccchhhhhhhhc--cc-----cEEEEecCcceeccc
Confidence 34666777776655433 22 267888999997654
|
|
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0026 Score=55.37 Aligned_cols=78 Identities=18% Similarity=0.180 Sum_probs=61.5
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
...++|-||+|..|.-+|++|+.+|.+-++.+|+..++..+...+ +.+...+.|.+ ++.++++++ +..
T Consensus 6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L---G~~~~~~p~~~--p~~~~~~~~-------~~~ 73 (382)
T COG3268 6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL---GPEAAVFPLGV--PAALEAMAS-------RTQ 73 (382)
T ss_pred ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhc---CccccccCCCC--HHHHHHHHh-------cce
Confidence 457899999999999999999999999999999999888877766 44444444444 555555554 789
Q ss_pred EEEECCCCCC
Q 022386 92 ILVNAAAGNF 101 (298)
Q Consensus 92 ~li~~ag~~~ 101 (298)
+++||+|...
T Consensus 74 VVlncvGPyt 83 (382)
T COG3268 74 VVLNCVGPYT 83 (382)
T ss_pred EEEecccccc
Confidence 9999999543
|
|
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.027 Score=49.67 Aligned_cols=115 Identities=15% Similarity=0.199 Sum_probs=73.9
Q ss_pred cEEEEecCCchhHHHHHHHHHHcC--CcEEEEcCChhHHHHHHHHHHhCC----CCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSLG----IPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G--~~Vv~~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
+.+.|.|+ |++|..++..|+.+| .+|++++++.+..+....++.+.. ...... . .+.+ .
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~--~~~~-----------~ 65 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-A--GDYS-----------D 65 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-c--CCHH-----------H
Confidence 36788886 899999999999999 479999999888888877775531 122222 1 2221 1
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
+...|++|+++|.... + ..+..+ .++.| .-+++.+.+.+.+... .+.+++++....
T Consensus 66 l~~aDIVIitag~~~~-~--g~~R~d---ll~~N----~~i~~~~~~~i~~~~~-------~~~vivvsNP~d 121 (306)
T cd05291 66 CKDADIVVITAGAPQK-P--GETRLD---LLEKN----AKIMKSIVPKIKASGF-------DGIFLVASNPVD 121 (306)
T ss_pred hCCCCEEEEccCCCCC-C--CCCHHH---HHHHH----HHHHHHHHHHHHHhCC-------CeEEEEecChHH
Confidence 2479999999986322 1 234433 33444 4455666666665432 477888876553
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0039 Score=57.84 Aligned_cols=80 Identities=23% Similarity=0.226 Sum_probs=57.7
Q ss_pred CCCCCcEEEEecC----------------CchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCC
Q 022386 8 DILKGKVALLTGG----------------GSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71 (298)
Q Consensus 8 ~~l~gk~~lVtG~----------------t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls 71 (298)
.+|+||.+|||+| ||-.|.++|+.+..+|++|+++.-... +. ....+..+.+
T Consensus 252 ~~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~--------~~-~p~~v~~i~V--- 319 (475)
T PRK13982 252 KPLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD--------LA-DPQGVKVIHV--- 319 (475)
T ss_pred cccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC--------CC-CCCCceEEEe---
Confidence 4699999999976 578999999999999999998864432 10 1222444433
Q ss_pred CHHHHHHHHHHHHHHhCCccEEEECCCCCCC
Q 022386 72 KREDAVRVVESTINHFGKLDILVNAAAGNFL 102 (298)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~id~li~~ag~~~~ 102 (298)
++.+++.+.+.+.+. .|++|++|+....
T Consensus 320 --~ta~eM~~av~~~~~-~Di~I~aAAVaDy 347 (475)
T PRK13982 320 --ESARQMLAAVEAALP-ADIAIFAAAVADW 347 (475)
T ss_pred --cCHHHHHHHHHhhCC-CCEEEEeccccce
Confidence 456666666666655 7999999986543
|
|
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0047 Score=55.01 Aligned_cols=76 Identities=21% Similarity=0.359 Sum_probs=52.3
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh-C-C
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-G-K 89 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-~-~ 89 (298)
|.++||+||+||+|...+......|++++++..++++.+ .+.+.+.+.. .|..+.+ +.+.+.+.. + .
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~----~~~~lGAd~v---i~y~~~~----~~~~v~~~t~g~g 211 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE----LLKELGADHV---INYREED----FVEQVRELTGGKG 211 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH----HHHhcCCCEE---EcCCccc----HHHHHHHHcCCCC
Confidence 899999999999999999998899988777777665444 3344444322 2344433 333333332 2 6
Q ss_pred ccEEEECCC
Q 022386 90 LDILVNAAA 98 (298)
Q Consensus 90 id~li~~ag 98 (298)
+|+++...|
T Consensus 212 vDvv~D~vG 220 (326)
T COG0604 212 VDVVLDTVG 220 (326)
T ss_pred ceEEEECCC
Confidence 999999988
|
|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0045 Score=54.04 Aligned_cols=42 Identities=19% Similarity=0.260 Sum_probs=37.0
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLR 50 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~ 50 (298)
.+++|++++|.|. |++|+++++.|...|++|++++|+.+..+
T Consensus 147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~ 188 (287)
T TIGR02853 147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLA 188 (287)
T ss_pred CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 3788999999999 66999999999999999999999876443
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0036 Score=58.69 Aligned_cols=47 Identities=21% Similarity=0.325 Sum_probs=40.4
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL 56 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~ 56 (298)
++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.+
T Consensus 329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~ 375 (477)
T PRK09310 329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRC 375 (477)
T ss_pred CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence 578999999996 79999999999999999999999887766665543
|
|
| >PRK14968 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.016 Score=46.82 Aligned_cols=78 Identities=19% Similarity=0.196 Sum_probs=55.8
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCC---eEEEEccCCCHHHHHHHHHHHHHH
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP---AIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~---~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
-.++++|-.|+..|. ++..+++++.+|+.++.+.+..+...+.+...+.+ +.++.+|+.+. +.+
T Consensus 22 ~~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---------~~~- 88 (188)
T PRK14968 22 KKGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP---------FRG- 88 (188)
T ss_pred cCCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc---------ccc-
Confidence 367889999888776 56666666899999999987777776666554433 78888887542 111
Q ss_pred hCCccEEEECCCCCC
Q 022386 87 FGKLDILVNAAAGNF 101 (298)
Q Consensus 87 ~~~id~li~~ag~~~ 101 (298)
..+|.++.|.....
T Consensus 89 -~~~d~vi~n~p~~~ 102 (188)
T PRK14968 89 -DKFDVILFNPPYLP 102 (188)
T ss_pred -cCceEEEECCCcCC
Confidence 26999999987544
|
|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.011 Score=52.76 Aligned_cols=81 Identities=20% Similarity=0.307 Sum_probs=57.2
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCCh---------------------hHHHHHHHHHHhCCC--CeE
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK---------------------TVLRSAVAALHSLGI--PAI 64 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~---------------------~~~~~~~~~~~~~~~--~~~ 64 (298)
.|++++|+|.|+ ||+|.++++.|+..|. ++.+++++. .+.+.+.+.+.+... ++.
T Consensus 21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~ 99 (338)
T PRK12475 21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIV 99 (338)
T ss_pred hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEE
Confidence 567889999987 7899999999999999 788898873 234445566665544 455
Q ss_pred EEEccCCCHHHHHHHHHHHHHHhCCccEEEECCC
Q 022386 65 GLEGDVRKREDAVRVVESTINHFGKLDILVNAAA 98 (298)
Q Consensus 65 ~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~ag 98 (298)
.+..|++. +.++.++ ...|++|.+..
T Consensus 100 ~~~~~~~~-~~~~~~~-------~~~DlVid~~D 125 (338)
T PRK12475 100 PVVTDVTV-EELEELV-------KEVDLIIDATD 125 (338)
T ss_pred EEeccCCH-HHHHHHh-------cCCCEEEEcCC
Confidence 66667753 3444433 36888888763
|
|
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0098 Score=51.94 Aligned_cols=81 Identities=21% Similarity=0.240 Sum_probs=52.7
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCCh---hHHHHHHHHHHhCC-CCeEEEEccCCCHHHHHHHHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK---TVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~---~~~~~~~~~~~~~~-~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
++++|+++|.|+ ||-+++++-.|+..|+ +|.++.|+. ++.+++++.+.... ..+.+. ++.+.+.+.
T Consensus 121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~--~~~~~~~l~------ 191 (288)
T PRK12749 121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVT--DLADQQAFA------ 191 (288)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEe--chhhhhhhh------
Confidence 578999999997 5669999999999998 699999984 46666666654321 112221 221111111
Q ss_pred HHHhCCccEEEECCCC
Q 022386 84 INHFGKLDILVNAAAG 99 (298)
Q Consensus 84 ~~~~~~id~li~~ag~ 99 (298)
+.....|++||+...
T Consensus 192 -~~~~~aDivINaTp~ 206 (288)
T PRK12749 192 -EALASADILTNGTKV 206 (288)
T ss_pred -hhcccCCEEEECCCC
Confidence 122478999998754
|
|
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.018 Score=49.13 Aligned_cols=78 Identities=21% Similarity=0.309 Sum_probs=52.1
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
..|.+++|+|+++ +|+++++.+...|.+|+++.++.++.+.. ...+... . .|..+.+..+.+. ....+.
T Consensus 133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~-~--~~~~~~~~~~~~~---~~~~~~ 201 (271)
T cd05188 133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA----KELGADH-V--IDYKEEDLEEELR---LTGGGG 201 (271)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH----HHhCCce-e--ccCCcCCHHHHHH---HhcCCC
Confidence 4578999999999 99999999989999999998886544332 2223221 1 2333333333332 222357
Q ss_pred ccEEEECCC
Q 022386 90 LDILVNAAA 98 (298)
Q Consensus 90 id~li~~ag 98 (298)
+|+++++++
T Consensus 202 ~d~vi~~~~ 210 (271)
T cd05188 202 ADVVIDAVG 210 (271)
T ss_pred CCEEEECCC
Confidence 999999987
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0057 Score=54.57 Aligned_cols=80 Identities=11% Similarity=0.172 Sum_probs=52.7
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|.+++|+|+++++|..++..+..+|++|+++.++.++.+.+.+. .+.+. + .|..+.++..+.+..... +++
T Consensus 151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~---lGa~~-v--i~~~~~~~~~~~i~~~~~--~gv 222 (338)
T cd08295 151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNK---LGFDD-A--FNYKEEPDLDAALKRYFP--NGI 222 (338)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCce-e--EEcCCcccHHHHHHHhCC--CCc
Confidence 478999999999999999988888999998888886654444332 23321 1 232322233333333321 479
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|+++.+.|
T Consensus 223 d~v~d~~g 230 (338)
T cd08295 223 DIYFDNVG 230 (338)
T ss_pred EEEEECCC
Confidence 99998876
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.011 Score=52.20 Aligned_cols=74 Identities=24% Similarity=0.377 Sum_probs=50.4
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.+.+++|+|+++++|+++++.+...|++|+++.++.++.+.+ .+.+... .+ |.. ++...+ ..+..+
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~~~~~-~~--~~~---~~~~~~----~~~~~~ 227 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL----KELGADY-VI--DGS---KFSEDV----KKLGGA 227 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH----HHcCCcE-EE--ecH---HHHHHH----HhccCC
Confidence 478999999999999999999999999999988876544333 2233221 11 221 122222 223479
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|++++++|
T Consensus 228 d~v~~~~g 235 (332)
T cd08259 228 DVVIELVG 235 (332)
T ss_pred CEEEECCC
Confidence 99999987
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0058 Score=53.10 Aligned_cols=39 Identities=26% Similarity=0.322 Sum_probs=35.4
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
-+++||.++|.|.++-.|+.++..|.++|++|.++.|..
T Consensus 155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t 193 (283)
T PRK14192 155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT 193 (283)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 378999999999999999999999999999999988743
|
|
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0075 Score=54.22 Aligned_cols=80 Identities=13% Similarity=0.207 Sum_probs=52.5
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|.+++|+|+++++|..++......|++|++++++.++.+.+.+. .+.+.. + |..+.+++.+.+.+... +.+
T Consensus 158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~---lGa~~v-i--~~~~~~~~~~~i~~~~~--~gv 229 (348)
T PLN03154 158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFDEA-F--NYKEEPDLDAALKRYFP--EGI 229 (348)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHh---cCCCEE-E--ECCCcccHHHHHHHHCC--CCc
Confidence 488999999999999999988888999998888876654433222 343221 2 33322233333333221 369
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|+++.+.|
T Consensus 230 D~v~d~vG 237 (348)
T PLN03154 230 DIYFDNVG 237 (348)
T ss_pred EEEEECCC
Confidence 99999887
|
|
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.052 Score=48.10 Aligned_cols=120 Identities=15% Similarity=0.164 Sum_probs=78.1
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCC--cEEEEcCChhHHHHHHHHHHhCC---CCeEEEEccCCCHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVES 82 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dls~~~~~~~~~~~ 82 (298)
.+-+++.+.|+|+ |.+|..++..|+..|. .+++++++.+.+....-++.+.. .++... . .+ .
T Consensus 2 ~~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~---~------ 68 (315)
T PRK00066 2 MKKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GD---Y------ 68 (315)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CC---H------
Confidence 3456789999998 9999999999999988 69999999888877777776642 122221 1 11 1
Q ss_pred HHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 83 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
+.+..-|++|..||.... + ..+..+ .++.|. -+++.+.+.+.+... .+.+++++....
T Consensus 69 --~~~~~adivIitag~~~k-~--g~~R~d---ll~~N~----~i~~~i~~~i~~~~~-------~~~vivvsNP~d 126 (315)
T PRK00066 69 --SDCKDADLVVITAGAPQK-P--GETRLD---LVEKNL----KIFKSIVGEVMASGF-------DGIFLVASNPVD 126 (315)
T ss_pred --HHhCCCCEEEEecCCCCC-C--CCCHHH---HHHHHH----HHHHHHHHHHHHhCC-------CeEEEEccCcHH
Confidence 123479999999996422 1 234433 344444 455555666655431 467777776543
|
|
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.039 Score=48.99 Aligned_cols=158 Identities=11% Similarity=0.115 Sum_probs=97.0
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCC-------cEEEEcCChhH--HHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHH
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGA-------AIAIMGRRKTV--LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES 82 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~-------~Vv~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~ 82 (298)
.+.+.|+|++|.+|..++..|+..|. .+++++.+... ++...-++.+....... .+.++. .
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~-~~~i~~---------~ 71 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLA-EIVITD---------D 71 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccC-ceEEec---------C
Confidence 46899999999999999999998876 69999985432 44444444432100000 001110 1
Q ss_pred HHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc--
Q 022386 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-- 160 (298)
Q Consensus 83 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~-- 160 (298)
..+.+..-|++|..||... ++ ..+..+ .+..| .-+++.+.+.+.+... +.+.++.+|.....
T Consensus 72 ~~~~~~daDivvitaG~~~-k~--g~tR~d---ll~~N----~~i~~~i~~~i~~~~~------~~~iiivvsNPvD~~t 135 (322)
T cd01338 72 PNVAFKDADWALLVGAKPR-GP--GMERAD---LLKAN----GKIFTAQGKALNDVAS------RDVKVLVVGNPCNTNA 135 (322)
T ss_pred cHHHhCCCCEEEEeCCCCC-CC--CCcHHH---HHHHH----HHHHHHHHHHHHhhCC------CCeEEEEecCcHHHHH
Confidence 1223358999999999632 22 234433 34444 4566777777766431 14677777765422
Q ss_pred ------c-CCCCchhhHHHHHHHHHHHHHHHHHhc-CCCCeEE
Q 022386 161 ------T-ATWYQIHVSAAKAAVDSITRSLALEWG-TDYAIRV 195 (298)
Q Consensus 161 ------~-~~~~~~~Y~~sK~a~~~l~~~la~e~~-~~~girv 195 (298)
. +.|....|+.++.--..|...+++.++ ....|+.
T Consensus 136 ~~~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~ 178 (322)
T cd01338 136 LIAMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKN 178 (322)
T ss_pred HHHHHHcCCCChHheEEehHHHHHHHHHHHHHHhCcChhHeEE
Confidence 2 255566788899999999999999886 2335664
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.01 Score=51.50 Aligned_cols=79 Identities=22% Similarity=0.331 Sum_probs=58.2
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.+..|+.++|.|+ ||-+++++..|++.|+ +++++.|+.++.+++++.+.+.+..+.. .++.+.+..+
T Consensus 122 ~~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~--~~~~~~~~~~--------- 189 (283)
T COG0169 122 VDVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEA--AALADLEGLE--------- 189 (283)
T ss_pred cccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccc--cccccccccc---------
Confidence 3556899999986 5679999999999996 7999999999999999988776542222 2222222221
Q ss_pred hCCccEEEECCCCC
Q 022386 87 FGKLDILVNAAAGN 100 (298)
Q Consensus 87 ~~~id~li~~ag~~ 100 (298)
..|++||+....
T Consensus 190 --~~dliINaTp~G 201 (283)
T COG0169 190 --EADLLINATPVG 201 (283)
T ss_pred --ccCEEEECCCCC
Confidence 479999998754
|
|
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.041 Score=42.63 Aligned_cols=114 Identities=18% Similarity=0.214 Sum_probs=72.4
Q ss_pred EEEEecCCchhHHHHHHHHHHcCC--cEEEEcCChhHHHHHHHHHHhC---C-CCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL---G-IPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~---~-~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
.+.|+|++|.+|.+++..|...+. ++++++++.+.++...-++.+. . .++.... .+.+ .+
T Consensus 2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~-----------~~ 67 (141)
T PF00056_consen 2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYE-----------AL 67 (141)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGG-----------GG
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---cccc-----------cc
Confidence 588999999999999999999876 6999999988777777777653 1 1122222 2221 23
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccc
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~ 158 (298)
...|++|..+|.... ...+.. +.++.|.. +++.+.+.+.+... .+.++.++...
T Consensus 68 ~~aDivvitag~~~~---~g~sR~---~ll~~N~~----i~~~~~~~i~~~~p-------~~~vivvtNPv 121 (141)
T PF00056_consen 68 KDADIVVITAGVPRK---PGMSRL---DLLEANAK----IVKEIAKKIAKYAP-------DAIVIVVTNPV 121 (141)
T ss_dssp TTESEEEETTSTSSS---TTSSHH---HHHHHHHH----HHHHHHHHHHHHST-------TSEEEE-SSSH
T ss_pred ccccEEEEecccccc---ccccHH---HHHHHhHh----HHHHHHHHHHHhCC-------ccEEEEeCCcH
Confidence 479999999996421 122333 33445544 45555555555431 46677776543
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.043 Score=47.28 Aligned_cols=36 Identities=19% Similarity=0.314 Sum_probs=30.5
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR 45 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~ 45 (298)
.|++..|+|.|+ ||+|.++++.|+..|. ++.+++.+
T Consensus 27 kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D 63 (268)
T PRK15116 27 LFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMD 63 (268)
T ss_pred HhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 567788888865 6899999999999996 78888876
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.025 Score=46.76 Aligned_cols=81 Identities=21% Similarity=0.336 Sum_probs=54.4
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCCh-------------------hHHHHHHHHHHhCCCCe--EEE
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK-------------------TVLRSAVAALHSLGIPA--IGL 66 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~-------------------~~~~~~~~~~~~~~~~~--~~~ 66 (298)
.|.+++++|.| .||+|.++++.|+..|. ++.+++.+. .+.+...+.+.+..+.+ ..+
T Consensus 18 kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~ 96 (202)
T TIGR02356 18 RLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTAL 96 (202)
T ss_pred HhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence 57788999998 67999999999999998 799998872 34444555666554443 344
Q ss_pred EccCCCHHHHHHHHHHHHHHhCCccEEEECCC
Q 022386 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAA 98 (298)
Q Consensus 67 ~~Dls~~~~~~~~~~~~~~~~~~id~li~~ag 98 (298)
..++.+ +.+..+ +...|++|.+..
T Consensus 97 ~~~i~~-~~~~~~-------~~~~D~Vi~~~d 120 (202)
T TIGR02356 97 KERVTA-ENLELL-------INNVDLVLDCTD 120 (202)
T ss_pred hhcCCH-HHHHHH-------HhCCCEEEECCC
Confidence 444432 233332 247888887763
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0047 Score=52.88 Aligned_cols=74 Identities=19% Similarity=0.173 Sum_probs=54.0
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
++++|+|||+- |+.+++.|.++|++|++..++....+... ..+ ...+..+..+.+++..++.+ .++|.
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~----~~g--~~~v~~g~l~~~~l~~~l~~-----~~i~~ 68 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYP----IHQ--ALTVHTGALDPQELREFLKR-----HSIDI 68 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccc----ccC--CceEEECCCCHHHHHHHHHh-----cCCCE
Confidence 37999999998 99999999999999999888765322221 111 22345677777777666653 47999
Q ss_pred EEECCC
Q 022386 93 LVNAAA 98 (298)
Q Consensus 93 li~~ag 98 (298)
+|+.+.
T Consensus 69 VIDAtH 74 (256)
T TIGR00715 69 LVDATH 74 (256)
T ss_pred EEEcCC
Confidence 999885
|
This enzyme was found to be a monomer by gel filtration. |
| >cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.013 Score=51.30 Aligned_cols=79 Identities=22% Similarity=0.309 Sum_probs=54.0
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.+++++|+|+++++|++++..+...|+.|++++++.+..+.. + +.+.+. ..|..+.+..+.+.+ ... .+.+
T Consensus 139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~---~~g~~~---~~~~~~~~~~~~~~~-~~~-~~~~ 209 (323)
T cd05276 139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-R---ALGADV---AINYRTEDFAEEVKE-ATG-GRGV 209 (323)
T ss_pred CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-H---HcCCCE---EEeCCchhHHHHHHH-HhC-CCCe
Confidence 578999999999999999999999999999998886654433 2 223221 234444333333332 221 1479
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|.+++++|
T Consensus 210 d~vi~~~g 217 (323)
T cd05276 210 DVILDMVG 217 (323)
T ss_pred EEEEECCc
Confidence 99999987
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding |
| >PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0035 Score=42.32 Aligned_cols=35 Identities=26% Similarity=0.442 Sum_probs=23.1
Q ss_pred CCC-cEEEEecCCchhHHH--HHHHHHHcCCcEEEEcCC
Q 022386 10 LKG-KVALLTGGGSGIGFE--ISLQLGKHGAAIAIMGRR 45 (298)
Q Consensus 10 l~g-k~~lVtG~t~giG~~--ia~~l~~~G~~Vv~~~r~ 45 (298)
++| |++||+|+|+|.|++ |+..| ..|++.+-+...
T Consensus 36 ~~GpK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fE 73 (78)
T PF12242_consen 36 INGPKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFE 73 (78)
T ss_dssp -TS-SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE--
T ss_pred CCCCceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeec
Confidence 355 899999999999999 55555 667877766543
|
|
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.017 Score=51.33 Aligned_cols=115 Identities=11% Similarity=0.177 Sum_probs=69.6
Q ss_pred EEEEecCCchhHHHHHHHHHHcCC-------cEEEEcCCh--hHHHHHHHHHHhCCCCeEEEEccCCCHHHHH----HHH
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGA-------AIAIMGRRK--TVLRSAVAALHSLGIPAIGLEGDVRKREDAV----RVV 80 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~-------~Vv~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~----~~~ 80 (298)
.+.|||++|.+|..++..|+..|. .+++++++. +. ......|+.+..... ..-
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~--------------~~g~~~Dl~d~~~~~~~~~~i~ 67 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKA--------------LEGVVMELQDCAFPLLKGVVIT 67 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCc--------------cceeeeehhhhcccccCCcEEe
Confidence 589999999999999999998664 489999875 32 222344444432000 000
Q ss_pred HHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccc
Q 022386 81 ESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (298)
Q Consensus 81 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~ 158 (298)
....+.+...|++|+.||... ++ ..+..+ .+..| .-+++.+.+.+.+... +.+.++.++...
T Consensus 68 ~~~~~~~~~aDiVVitAG~~~-~~--g~tR~d---ll~~N----~~i~~~i~~~i~~~~~------~~~iiivvsNPv 129 (323)
T cd00704 68 TDPEEAFKDVDVAILVGAFPR-KP--GMERAD---LLRKN----AKIFKEQGEALNKVAK------PTVKVLVVGNPA 129 (323)
T ss_pred cChHHHhCCCCEEEEeCCCCC-Cc--CCcHHH---HHHHh----HHHHHHHHHHHHHhCC------CCeEEEEeCCcH
Confidence 122334468999999999642 21 234433 34444 4566777777766520 156777776544
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.016 Score=51.58 Aligned_cols=117 Identities=11% Similarity=0.125 Sum_probs=69.7
Q ss_pred EEEEecCCchhHHHHHHHHHHcCC-------cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHH-H-H--HHH
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGA-------AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAV-R-V--VES 82 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~-------~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~-~-~--~~~ 82 (298)
.+.|+|++|.+|..++..|+..|. .+++++++.... .......|+.+..... . . ...
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~------------~a~g~~~Dl~d~~~~~~~~~~~~~~ 68 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK------------VLEGVVMELMDCAFPLLDGVVPTHD 68 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc------------ccceeEeehhcccchhcCceeccCC
Confidence 478999999999999999998665 389998864310 1223445555544111 0 0 001
Q ss_pred HHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccc
Q 022386 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (298)
Q Consensus 83 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~ 158 (298)
..+.+...|++|+.||.... + . +.+.+.++.|+ -+++.+.+.+.+... +.+.++.++...
T Consensus 69 ~~~~~~~aDiVVitAG~~~~-~--~---~tr~~ll~~N~----~i~k~i~~~i~~~~~------~~~iiivvsNPv 128 (324)
T TIGR01758 69 PAVAFTDVDVAILVGAFPRK-E--G---MERRDLLSKNV----KIFKEQGRALDKLAK------KDCKVLVVGNPA 128 (324)
T ss_pred hHHHhCCCCEEEEcCCCCCC-C--C---CcHHHHHHHHH----HHHHHHHHHHHhhCC------CCeEEEEeCCcH
Confidence 23345689999999996422 1 1 22345555555 456666666665410 146777777544
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.02 Score=53.79 Aligned_cols=86 Identities=20% Similarity=0.157 Sum_probs=57.4
Q ss_pred CCCCCCC----CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh-HHHHHHHHHHhCCCCeEEEEccCCCHHH
Q 022386 1 MESPFKG----DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEGDVRKRED 75 (298)
Q Consensus 1 ~~~~~~~----~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 75 (298)
|++|.-. .++.+|+++|.|+ |++|.++|+.|.++|++|++++++.. ......+.+.+.+..+ +..+-..
T Consensus 1 ~~~~~~~~~~~~~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~--~~~~~~~--- 74 (480)
T PRK01438 1 MSRPPGLTSWHSDWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATV--RLGPGPT--- 74 (480)
T ss_pred CCcccchhhcccCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEE--EECCCcc---
Confidence 5666332 2678999999997 77999999999999999999986543 3334455566655333 2221111
Q ss_pred HHHHHHHHHHHhCCccEEEECCCCCCC
Q 022386 76 AVRVVESTINHFGKLDILVNAAAGNFL 102 (298)
Q Consensus 76 ~~~~~~~~~~~~~~id~li~~ag~~~~ 102 (298)
.....|.+|..+|+.+.
T Consensus 75 ----------~~~~~D~Vv~s~Gi~~~ 91 (480)
T PRK01438 75 ----------LPEDTDLVVTSPGWRPD 91 (480)
T ss_pred ----------ccCCCCEEEECCCcCCC
Confidence 01368999999987543
|
|
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0063 Score=48.64 Aligned_cols=39 Identities=18% Similarity=0.247 Sum_probs=35.3
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
.+|.||+++|.|++.-+|..+++.|.++|++|.++.|+.
T Consensus 40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~ 78 (168)
T cd01080 40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT 78 (168)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence 479999999999977689999999999999999998873
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.008 Score=53.30 Aligned_cols=79 Identities=8% Similarity=0.125 Sum_probs=52.7
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|.+++|+|+++++|..++......|++|+++.++.++.+.+ .+.+.+..+ |..+.+...+.++.... +++
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~----~~lGa~~vi---~~~~~~~~~~~~~~~~~--~gv 208 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL----KKLGFDVAF---NYKTVKSLEETLKKASP--DGY 208 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCCCEEE---eccccccHHHHHHHhCC--CCe
Confidence 478999999999999999988888899999888876554333 334443222 33332234443333321 369
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|+++.+.|
T Consensus 209 dvv~d~~G 216 (325)
T TIGR02825 209 DCYFDNVG 216 (325)
T ss_pred EEEEECCC
Confidence 99999887
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.042 Score=51.66 Aligned_cols=112 Identities=20% Similarity=0.219 Sum_probs=69.6
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCH-------------HH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR-------------ED 75 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~-------------~~ 75 (298)
...+.+++|+|+ |.+|...+..+...|+.|++++++.++++... +.|.+. +..|..+. +.
T Consensus 162 ~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae----slGA~~--v~i~~~e~~~~~~gya~~~s~~~ 234 (509)
T PRK09424 162 KVPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE----SMGAEF--LELDFEEEGGSGDGYAKVMSEEF 234 (509)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HcCCeE--EEeccccccccccchhhhcchhH
Confidence 446889999986 67899999999999999999999987655332 335442 22233221 11
Q ss_pred HHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEec
Q 022386 76 AVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS 155 (298)
Q Consensus 76 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vs 155 (298)
.++..+.+.+..+..|++|.+++..... ++..+++..+..|+. +|.||.++
T Consensus 235 ~~~~~~~~~~~~~gaDVVIetag~pg~~-------------------aP~lit~~~v~~mkp----------GgvIVdvg 285 (509)
T PRK09424 235 IKAEMALFAEQAKEVDIIITTALIPGKP-------------------APKLITAEMVASMKP----------GSVIVDLA 285 (509)
T ss_pred HHHHHHHHHhccCCCCEEEECCCCCccc-------------------CcchHHHHHHHhcCC----------CCEEEEEc
Confidence 2222222233335799999999963311 122334556667764 57788776
Q ss_pred c
Q 022386 156 A 156 (298)
Q Consensus 156 s 156 (298)
.
T Consensus 286 ~ 286 (509)
T PRK09424 286 A 286 (509)
T ss_pred c
Confidence 5
|
|
| >TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.034 Score=52.21 Aligned_cols=84 Identities=20% Similarity=0.168 Sum_probs=58.5
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCC-------------CHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR-------------KRED 75 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls-------------~~~~ 75 (298)
...+.+++|.|+ |.+|...+..+...|+.|++++++.++++... +.+. .++..|.. +.+.
T Consensus 161 ~vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~----~lGa--~~v~v~~~e~g~~~~gYa~~~s~~~ 233 (511)
T TIGR00561 161 KVPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ----SMGA--EFLELDFKEEGGSGDGYAKVMSEEF 233 (511)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HcCC--eEEeccccccccccccceeecCHHH
Confidence 345679999995 89999999999999999999999877544322 2332 33444432 2344
Q ss_pred HHHHHHHHHHHhCCccEEEECCCC
Q 022386 76 AVRVVESTINHFGKLDILVNAAAG 99 (298)
Q Consensus 76 ~~~~~~~~~~~~~~id~li~~ag~ 99 (298)
.+...+.+.+.....|++|+++-+
T Consensus 234 ~~~~~~~~~e~~~~~DIVI~Tali 257 (511)
T TIGR00561 234 IAAEMELFAAQAKEVDIIITTALI 257 (511)
T ss_pred HHHHHHHHHHHhCCCCEEEECccc
Confidence 444555555566789999999954
|
In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff. |
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.027 Score=50.34 Aligned_cols=37 Identities=24% Similarity=0.376 Sum_probs=32.9
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCCh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK 46 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~ 46 (298)
.|+.++|+|.|+ ||+|..+++.|+..|. ++.+++.+.
T Consensus 21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~ 58 (339)
T PRK07688 21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDY 58 (339)
T ss_pred HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence 567789999988 8999999999999999 799998863
|
|
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.015 Score=51.44 Aligned_cols=76 Identities=21% Similarity=0.281 Sum_probs=54.5
Q ss_pred CCCC-CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 8 DILK-GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 8 ~~l~-gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
..+. |+.++|+|.. |+|...++.....|++|++++++.++++...+. +.+.. .|.++++..+..-+
T Consensus 162 ~~~~pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~l----GAd~~---i~~~~~~~~~~~~~----- 228 (339)
T COG1064 162 ANVKPGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKKL----GADHV---INSSDSDALEAVKE----- 228 (339)
T ss_pred cCCCCCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHh----CCcEE---EEcCCchhhHHhHh-----
Confidence 3443 8999999999 999998888888999999999998776544333 33222 24445555554433
Q ss_pred hCCccEEEECCC
Q 022386 87 FGKLDILVNAAA 98 (298)
Q Consensus 87 ~~~id~li~~ag 98 (298)
.+|++|.+++
T Consensus 229 --~~d~ii~tv~ 238 (339)
T COG1064 229 --IADAIIDTVG 238 (339)
T ss_pred --hCcEEEECCC
Confidence 2899999886
|
|
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.072 Score=44.91 Aligned_cols=142 Identities=13% Similarity=0.111 Sum_probs=79.4
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCCh-------------------hHHHHHHHHHHhCCCCe--EEE
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK-------------------TVLRSAVAALHSLGIPA--IGL 66 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~-------------------~~~~~~~~~~~~~~~~~--~~~ 66 (298)
.|++.+++|.|. ||+|..+++.|+..|. ++++++.+. .+.+...+.+.+..+.+ ..+
T Consensus 8 ~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~ 86 (231)
T cd00755 8 KLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAV 86 (231)
T ss_pred HHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEe
Confidence 466788888865 6899999999999999 788888753 23333444455544433 333
Q ss_pred EccCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCC
Q 022386 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSS 146 (298)
Q Consensus 67 ~~Dls~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~ 146 (298)
...++ ++....++. ...|++|.+.. +.+ .-..+.+.+.. .+
T Consensus 87 ~~~i~-~~~~~~l~~------~~~D~VvdaiD----------~~~-----------~k~~L~~~c~~----~~------- 127 (231)
T cd00755 87 EEFLT-PDNSEDLLG------GDPDFVVDAID----------SIR-----------AKVALIAYCRK----RK------- 127 (231)
T ss_pred eeecC-HhHHHHHhc------CCCCEEEEcCC----------CHH-----------HHHHHHHHHHH----hC-------
Confidence 33333 233333331 35787777753 111 11222233322 11
Q ss_pred CCcEEEEecccccccCCCCc-hhhHHHHHHHHHHHHHHHHHhcCCCCeE
Q 022386 147 SGGIIINISATLHYTATWYQ-IHVSAAKAAVDSITRSLALEWGTDYAIR 194 (298)
Q Consensus 147 ~~g~iv~vss~~~~~~~~~~-~~Y~~sK~a~~~l~~~la~e~~~~~gir 194 (298)
-.+|...+..+. ..|.. ..-..+|.-...|++.+..++. +.||+
T Consensus 128 --ip~I~s~g~g~~-~dp~~i~i~di~~t~~~pla~~~R~~Lr-k~~~~ 172 (231)
T cd00755 128 --IPVISSMGAGGK-LDPTRIRVADISKTSGDPLARKVRKRLR-KRGIF 172 (231)
T ss_pred --CCEEEEeCCcCC-CCCCeEEEccEeccccCcHHHHHHHHHH-HcCCC
Confidence 115544343332 22221 2234567777899999999997 55664
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.02 Score=51.18 Aligned_cols=77 Identities=9% Similarity=0.148 Sum_probs=50.8
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
.+++|+|+++++|.+++......|+ +|+++.++.++.+.+.++ .|.+. .+ |..+ +++.+.+.++.. +++|
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~---lGa~~-vi--~~~~-~~~~~~i~~~~~--~gvd 226 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSE---LGFDA-AI--NYKT-DNVAERLRELCP--EGVD 226 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHh---cCCcE-EE--ECCC-CCHHHHHHHHCC--CCce
Confidence 8999999999999999988888899 799888876654443332 34322 22 2222 223333333322 4799
Q ss_pred EEEECCC
Q 022386 92 ILVNAAA 98 (298)
Q Consensus 92 ~li~~ag 98 (298)
+++.+.|
T Consensus 227 ~vid~~g 233 (345)
T cd08293 227 VYFDNVG 233 (345)
T ss_pred EEEECCC
Confidence 9999887
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >COG3007 Uncharacterized paraquat-inducible protein B [Function unknown] | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.5 Score=40.71 Aligned_cols=243 Identities=18% Similarity=0.117 Sum_probs=125.1
Q ss_pred CcEEEEecCCchhHHHHH--HHHHHcCCcEEEEc--CCh----------hHHHHHHHHHHhCCCCeEEEEccCCCHHHHH
Q 022386 12 GKVALLTGGGSGIGFEIS--LQLGKHGAAIAIMG--RRK----------TVLRSAVAALHSLGIPAIGLEGDVRKREDAV 77 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia--~~l~~~G~~Vv~~~--r~~----------~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~ 77 (298)
.|.+||.|+|+|.|.+.- ..|- .|+..+-+. |.. -......+...+.|.=..-+..|..+.+--+
T Consensus 41 PKkVLviGaSsGyGLa~RIsaaFG-~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~k~ 119 (398)
T COG3007 41 PKKVLVIGASSGYGLAARISAAFG-PGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEMKQ 119 (398)
T ss_pred CceEEEEecCCcccHHHHHHHHhC-CCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCceeeecccchhhHHHHH
Confidence 589999999999998743 3333 456544332 211 1111222333344544556778988888888
Q ss_pred HHHHHHHHHhCCccEEEECCCCCCC-------------CCC---------------------CCCCHHHHHHHHHhhhHH
Q 022386 78 RVVESTINHFGKLDILVNAAAGNFL-------------VPA---------------------EDLSPNGFRTVIEIDSVG 123 (298)
Q Consensus 78 ~~~~~~~~~~~~id~li~~ag~~~~-------------~~~---------------------~~~~~~~~~~~~~~n~~~ 123 (298)
..++.+.+.||.+|.+|+.-+-... +++ ...+.++++.+..+-=--
T Consensus 120 kvIe~Ik~~~g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~~lepAseqEI~~Tv~VMGGe 199 (398)
T COG3007 120 KVIEAIKQDFGKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEATLEPASEQEIADTVAVMGGE 199 (398)
T ss_pred HHHHHHHHhhccccEEEEeccCccccCCCcchhhHhhhcchhhhccccccccccceeeeeecccccHHHHHHHHHhhCcc
Confidence 8999999999999999887531100 000 111222222221111000
Q ss_pred HH-HHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC--chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeC
Q 022386 124 TF-IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY--QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP 200 (298)
Q Consensus 124 ~~-~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~--~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~P 200 (298)
-| +.+++++..-.- +.+.+-|..|-+.....++- .++-+.+|.-++.-+..+...++ ..|=+.+....
T Consensus 200 DWq~WidaLl~advl--------aeg~kTiAfsYiG~~iT~~IYw~GtiG~AK~DLd~~~~~inekLa-~~gG~A~vsVl 270 (398)
T COG3007 200 DWQMWIDALLEADVL--------AEGAKTIAFSYIGEKITHPIYWDGTIGRAKKDLDQKSLAINEKLA-ALGGGARVSVL 270 (398)
T ss_pred hHHHHHHHHHhcccc--------ccCceEEEEEecCCccccceeeccccchhhhcHHHHHHHHHHHHH-hcCCCeeeeeh
Confidence 11 112333322111 11344554444443333321 35678999999999999999887 44334433332
Q ss_pred CcccCCcccCcCCh-HHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCC
Q 022386 201 GPIKDTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRD 269 (298)
Q Consensus 201 G~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~ 269 (298)
-.+-|... ..++. +-....+.+.. +.-++-|-..+-+..|.++ +--.|+.+.+|....++..+|
T Consensus 271 KavVTqAS-saIP~~plYla~lfkvM--Kekg~HEgcIeQi~rlfse--~ly~g~~~~~D~e~rlR~Dd~ 335 (398)
T COG3007 271 KAVVTQAS-SAIPMMPLYLAILFKVM--KEKGTHEGCIEQIDRLFSE--KLYSGSKIQLDDEGRLRMDDW 335 (398)
T ss_pred HHHHhhhh-hccccccHHHHHHHHHH--HHcCcchhHHHHHHHHHHH--HhhCCCCCCcCcccccccchh
Confidence 22333211 11110 11111111111 1123445566677777765 223388888988888877664
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.016 Score=53.61 Aligned_cols=72 Identities=18% Similarity=0.329 Sum_probs=52.1
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
++.+++++|.|+ |.+|+.+++.|...|+ .|++++|+.++.+++++.+ +.. .+ +.++....+
T Consensus 179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~---g~~--~~-----~~~~~~~~l------- 240 (423)
T PRK00045 179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF---GGE--AI-----PLDELPEAL------- 240 (423)
T ss_pred CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc---CCc--Ee-----eHHHHHHHh-------
Confidence 588999999987 9999999999999998 7899999987766665554 221 11 122232222
Q ss_pred CCccEEEECCC
Q 022386 88 GKLDILVNAAA 98 (298)
Q Consensus 88 ~~id~li~~ag 98 (298)
...|++|.+.+
T Consensus 241 ~~aDvVI~aT~ 251 (423)
T PRK00045 241 AEADIVISSTG 251 (423)
T ss_pred ccCCEEEECCC
Confidence 36899998886
|
|
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.019 Score=50.34 Aligned_cols=40 Identities=20% Similarity=0.312 Sum_probs=35.7
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV 48 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~ 48 (298)
.++.+++++|.|. |++|+.++..|...|++|++++|+.+.
T Consensus 148 ~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~ 187 (296)
T PRK08306 148 ITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAH 187 (296)
T ss_pred CCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence 4678999999997 679999999999999999999999654
|
|
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.029 Score=51.04 Aligned_cols=81 Identities=22% Similarity=0.355 Sum_probs=54.3
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCC-------------------hhHHHHHHHHHHhCCCC--eEEE
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR-------------------KTVLRSAVAALHSLGIP--AIGL 66 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~-------------------~~~~~~~~~~~~~~~~~--~~~~ 66 (298)
.|++++|+|.|+ ||+|..+++.|+..|. ++++++++ ..+.+.+.+.+.+..+. +..+
T Consensus 132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~ 210 (376)
T PRK08762 132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV 210 (376)
T ss_pred HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence 467788888855 8999999999999999 68999887 34555556666555443 3344
Q ss_pred EccCCCHHHHHHHHHHHHHHhCCccEEEECCC
Q 022386 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAA 98 (298)
Q Consensus 67 ~~Dls~~~~~~~~~~~~~~~~~~id~li~~ag 98 (298)
...+++ +.+..++ ...|++|++..
T Consensus 211 ~~~~~~-~~~~~~~-------~~~D~Vv~~~d 234 (376)
T PRK08762 211 QERVTS-DNVEALL-------QDVDVVVDGAD 234 (376)
T ss_pred eccCCh-HHHHHHH-------hCCCEEEECCC
Confidence 444432 2333333 36788888774
|
|
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.043 Score=46.78 Aligned_cols=36 Identities=25% Similarity=0.372 Sum_probs=31.8
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR 45 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~ 45 (298)
.|++++|+|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus 29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D 65 (245)
T PRK05690 29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFD 65 (245)
T ss_pred HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 567889999988 9999999999999998 68888775
|
|
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.021 Score=52.61 Aligned_cols=73 Identities=27% Similarity=0.357 Sum_probs=52.3
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcC-CcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.++.+++++|.|+ |.+|..+++.|...| .+|++++|+.++.++..+.+ +.. .+.. +++...+
T Consensus 176 ~~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~---g~~--~i~~-----~~l~~~l------ 238 (417)
T TIGR01035 176 GSLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL---GGE--AVKF-----EDLEEYL------ 238 (417)
T ss_pred CCccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc---CCe--EeeH-----HHHHHHH------
Confidence 3588999999997 999999999999999 57999999977665555543 221 1211 2333332
Q ss_pred hCCccEEEECCC
Q 022386 87 FGKLDILVNAAA 98 (298)
Q Consensus 87 ~~~id~li~~ag 98 (298)
...|++|.+.+
T Consensus 239 -~~aDvVi~aT~ 249 (417)
T TIGR01035 239 -AEADIVISSTG 249 (417)
T ss_pred -hhCCEEEECCC
Confidence 26899999876
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.021 Score=48.02 Aligned_cols=74 Identities=15% Similarity=0.277 Sum_probs=55.2
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l 93 (298)
.++|.|+ |-+|..+|+.|.++|++|++++++.+..++..+. ...+..+.+|-++++-++++= ....|++
T Consensus 2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~----~~~~~~v~gd~t~~~~L~~ag------i~~aD~v 70 (225)
T COG0569 2 KIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD----ELDTHVVIGDATDEDVLEEAG------IDDADAV 70 (225)
T ss_pred EEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh----hcceEEEEecCCCHHHHHhcC------CCcCCEE
Confidence 4566655 5679999999999999999999998766553331 123677889999998877761 1367888
Q ss_pred EECCC
Q 022386 94 VNAAA 98 (298)
Q Consensus 94 i~~ag 98 (298)
|-..+
T Consensus 71 va~t~ 75 (225)
T COG0569 71 VAATG 75 (225)
T ss_pred EEeeC
Confidence 87776
|
|
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.02 Score=51.29 Aligned_cols=81 Identities=22% Similarity=0.273 Sum_probs=53.1
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
.=.|+.+||.||++|+|.+.++-....|+..+++..+.+. .++.+.+ |.+ ...|..+++-++...+.. .+
T Consensus 155 ~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~-~~l~k~l---GAd---~vvdy~~~~~~e~~kk~~---~~ 224 (347)
T KOG1198|consen 155 LSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEK-LELVKKL---GAD---EVVDYKDENVVELIKKYT---GK 224 (347)
T ss_pred cCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccch-HHHHHHc---CCc---EeecCCCHHHHHHHHhhc---CC
Confidence 3458899999999999999999888899544444444332 2333333 322 234777744443333322 47
Q ss_pred CccEEEECCCC
Q 022386 89 KLDILVNAAAG 99 (298)
Q Consensus 89 ~id~li~~ag~ 99 (298)
++|+++-+.|.
T Consensus 225 ~~DvVlD~vg~ 235 (347)
T KOG1198|consen 225 GVDVVLDCVGG 235 (347)
T ss_pred CccEEEECCCC
Confidence 99999999985
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.022 Score=53.73 Aligned_cols=75 Identities=11% Similarity=0.221 Sum_probs=54.1
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
+|.+++++|.|+ |.+|+.+++.|...|+ +|+++.|+.++.+.+.+.+. +..+.+. ++ ++....+
T Consensus 263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~--g~~i~~~--~~---~dl~~al------- 327 (519)
T PLN00203 263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFP--DVEIIYK--PL---DEMLACA------- 327 (519)
T ss_pred CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhC--CCceEee--cH---hhHHHHH-------
Confidence 488999999999 9999999999999998 69999999887777666552 1112221 11 2222222
Q ss_pred CCccEEEECCC
Q 022386 88 GKLDILVNAAA 98 (298)
Q Consensus 88 ~~id~li~~ag 98 (298)
...|++|.+.+
T Consensus 328 ~~aDVVIsAT~ 338 (519)
T PLN00203 328 AEADVVFTSTS 338 (519)
T ss_pred hcCCEEEEccC
Confidence 36899998875
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.02 Score=42.49 Aligned_cols=71 Identities=25% Similarity=0.283 Sum_probs=52.6
Q ss_pred EEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEE
Q 022386 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV 94 (298)
Q Consensus 15 ~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li 94 (298)
++|.|. +.+|+.+++.|.+.+.+|++++++.+..+. +...+ +.++..|.++++.++++-- .+.+.+|
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~----~~~~~--~~~i~gd~~~~~~l~~a~i------~~a~~vv 67 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEE----LREEG--VEVIYGDATDPEVLERAGI------EKADAVV 67 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHH----HHHTT--SEEEES-TTSHHHHHHTTG------GCESEEE
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHH----HHhcc--cccccccchhhhHHhhcCc------cccCEEE
Confidence 467777 479999999999977799999999765443 33333 6788999999998887622 3678787
Q ss_pred ECCC
Q 022386 95 NAAA 98 (298)
Q Consensus 95 ~~ag 98 (298)
....
T Consensus 68 ~~~~ 71 (116)
T PF02254_consen 68 ILTD 71 (116)
T ss_dssp EESS
T ss_pred EccC
Confidence 7765
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.037 Score=41.86 Aligned_cols=76 Identities=12% Similarity=0.173 Sum_probs=54.7
Q ss_pred EEEEecCCchhHHHHHHHHHH-cCCcEEE-EcCCh----------------------hHHHHHHHHHHhCCCCeEEEEcc
Q 022386 14 VALLTGGGSGIGFEISLQLGK-HGAAIAI-MGRRK----------------------TVLRSAVAALHSLGIPAIGLEGD 69 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~-~G~~Vv~-~~r~~----------------------~~~~~~~~~~~~~~~~~~~~~~D 69 (298)
.++|.|++|.+|+.+++.+.+ .|.+++. ++++. +.+++..+. .+ +..|
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~-----~D---VvID 73 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE-----AD---VVID 73 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH------S---EEEE
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc-----CC---EEEE
Confidence 689999999999999999998 6777654 56665 223333322 11 4569
Q ss_pred CCCHHHHHHHHHHHHHHhCCccEEEECCCC
Q 022386 70 VRKREDAVRVVESTINHFGKLDILVNAAAG 99 (298)
Q Consensus 70 ls~~~~~~~~~~~~~~~~~~id~li~~ag~ 99 (298)
+|.++.+...++...+. ++.+++-..|+
T Consensus 74 fT~p~~~~~~~~~~~~~--g~~~ViGTTG~ 101 (124)
T PF01113_consen 74 FTNPDAVYDNLEYALKH--GVPLVIGTTGF 101 (124)
T ss_dssp ES-HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred cCChHHhHHHHHHHHhC--CCCEEEECCCC
Confidence 99999999999988876 78888888884
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.028 Score=49.72 Aligned_cols=73 Identities=22% Similarity=0.344 Sum_probs=52.3
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
++.+++++|.|+ |.+|+.+++.|...|. .|++++|+.++.+++++.+ +. ..+ +.+++...+
T Consensus 175 ~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~---g~--~~~-----~~~~~~~~l------- 236 (311)
T cd05213 175 NLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL---GG--NAV-----PLDELLELL------- 236 (311)
T ss_pred CccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc---CC--eEE-----eHHHHHHHH-------
Confidence 478999999987 9999999999998775 6888999887766666554 22 111 122333322
Q ss_pred CCccEEEECCCC
Q 022386 88 GKLDILVNAAAG 99 (298)
Q Consensus 88 ~~id~li~~ag~ 99 (298)
...|++|.+.+.
T Consensus 237 ~~aDvVi~at~~ 248 (311)
T cd05213 237 NEADVVISATGA 248 (311)
T ss_pred hcCCEEEECCCC
Confidence 357999999873
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.016 Score=44.74 Aligned_cols=40 Identities=23% Similarity=0.306 Sum_probs=36.8
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~ 47 (298)
-+++||.++|.|-+.-+|+.++..|.++|++|.++.++..
T Consensus 24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~ 63 (140)
T cd05212 24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI 63 (140)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc
Confidence 3799999999999999999999999999999999987653
|
NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.027 Score=52.44 Aligned_cols=59 Identities=10% Similarity=0.242 Sum_probs=42.7
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHH
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVR 78 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~ 78 (298)
.++|.|+ |.+|+++++.|.++|..|++++++.+..+...+. ..+.++.+|.++...+++
T Consensus 2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~-----~~~~~~~gd~~~~~~l~~ 60 (453)
T PRK09496 2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDR-----LDVRTVVGNGSSPDVLRE 60 (453)
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh-----cCEEEEEeCCCCHHHHHH
Confidence 5888887 9999999999999999999999987765554331 124455556665544443
|
|
| >PRK13403 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.058 Score=47.51 Aligned_cols=94 Identities=14% Similarity=0.178 Sum_probs=58.7
Q ss_pred CCCCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHH------HHHhC--CCCeEEEEccCCCHH
Q 022386 3 SPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVA------ALHSL--GIPAIGLEGDVRKRE 74 (298)
Q Consensus 3 ~~~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~------~~~~~--~~~~~~~~~Dls~~~ 74 (298)
.+.+...|+||++.|.|- |.+|+++|+.|...|.+|++..+.....+.... .+.+. ..++..+. +.+.+
T Consensus 7 ~d~~~~~LkgKtVGIIG~-GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~v~sl~Eaak~ADVV~ll--LPd~~ 83 (335)
T PRK13403 7 KDANVELLQGKTVAVIGY-GSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEVMSVSEAVRTAQVVQML--LPDEQ 83 (335)
T ss_pred ccCChhhhCcCEEEEEeE-cHHHHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCEECCHHHHHhcCCEEEEe--CCChH
Confidence 345678899999999986 789999999999999999988765332221111 11111 23344433 33444
Q ss_pred HHHHHH-HHHHHHhCCccEEEECCCCC
Q 022386 75 DAVRVV-ESTINHFGKLDILVNAAAGN 100 (298)
Q Consensus 75 ~~~~~~-~~~~~~~~~id~li~~ag~~ 100 (298)
+ +.++ +.+.....+=.+|+...|++
T Consensus 84 t-~~V~~~eil~~MK~GaiL~f~hgfn 109 (335)
T PRK13403 84 Q-AHVYKAEVEENLREGQMLLFSHGFN 109 (335)
T ss_pred H-HHHHHHHHHhcCCCCCEEEECCCcc
Confidence 4 4554 34555545556677777754
|
|
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.043 Score=48.49 Aligned_cols=78 Identities=10% Similarity=0.161 Sum_probs=51.5
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|.+++|+|+++++|.+++......|++|+++.++.++.+.+ .+.+.+. .+ |..+++-.++ +.+... +.+
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l----~~~Ga~~-vi--~~~~~~~~~~-v~~~~~--~gv 212 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWL----KELGFDA-VF--NYKTVSLEEA-LKEAAP--DGI 212 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCCCE-EE--eCCCccHHHH-HHHHCC--CCc
Confidence 478999999999999999888888999999888876554333 3334322 22 3333322222 222221 469
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|+++.+.|
T Consensus 213 d~vld~~g 220 (329)
T cd08294 213 DCYFDNVG 220 (329)
T ss_pred EEEEECCC
Confidence 99998876
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.015 Score=44.43 Aligned_cols=55 Identities=18% Similarity=0.260 Sum_probs=42.4
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCH
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR 73 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 73 (298)
+++.+++.|.+ .|.++|..|.+.|++|++++.+....+...+. + +.++..|+.++
T Consensus 16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~----~--~~~v~dDlf~p 70 (134)
T PRK04148 16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL----G--LNAFVDDLFNP 70 (134)
T ss_pred cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh----C--CeEEECcCCCC
Confidence 46789999988 78888999999999999999998754433222 2 56677888864
|
|
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.018 Score=49.88 Aligned_cols=39 Identities=28% Similarity=0.338 Sum_probs=36.0
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
-+|+||.++|+|.+.-+|+.++..|..+|++|.++.++.
T Consensus 154 i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t 192 (286)
T PRK14175 154 IDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS 192 (286)
T ss_pred CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence 379999999999999999999999999999999998763
|
|
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.077 Score=45.70 Aligned_cols=119 Identities=14% Similarity=0.203 Sum_probs=72.0
Q ss_pred EEEecCCchhHHHHHHHHHHcC----CcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 15 ALLTGGGSGIGFEISLQLGKHG----AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 15 ~lVtG~t~giG~~ia~~l~~~G----~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
+.|+|++|.+|..++..|+..| .+|++++.+.+.++....++.+..... ....++-.++... .+...
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~--~~~~i~~~~d~~~-------~~~~a 71 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL--ADIKVSITDDPYE-------AFKDA 71 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc--cCcEEEECCchHH-------HhCCC
Confidence 4689998899999999999999 689999999887777777776542211 0111111111112 23479
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
|++|..+|..... ..+.. ..+. ...-+.+.+.+.+.+... .+.+++++....
T Consensus 72 DiVv~t~~~~~~~---g~~r~---~~~~----~n~~i~~~i~~~i~~~~p-------~a~~i~~tNP~d 123 (263)
T cd00650 72 DVVIITAGVGRKP---GMGRL---DLLK----RNVPIVKEIGDNIEKYSP-------DAWIIVVSNPVD 123 (263)
T ss_pred CEEEECCCCCCCc---CCCHH---HHHH----HHHHHHHHHHHHHHHHCC-------CeEEEEecCcHH
Confidence 9999999854321 12222 1222 334455666666655431 577878776543
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.087 Score=44.37 Aligned_cols=81 Identities=16% Similarity=0.287 Sum_probs=54.0
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCCh-------------------hHHHHHHHHHHhCCC--CeEEE
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK-------------------TVLRSAVAALHSLGI--PAIGL 66 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~-------------------~~~~~~~~~~~~~~~--~~~~~ 66 (298)
.|.+++++|.| .||+|.++++.|+..|. ++++++.+. .+.+.+.+.+++..+ ++..+
T Consensus 18 ~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~ 96 (228)
T cd00757 18 KLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY 96 (228)
T ss_pred HHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence 46778899998 67999999999999999 677775532 344455566666544 34555
Q ss_pred EccCCCHHHHHHHHHHHHHHhCCccEEEECCC
Q 022386 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAA 98 (298)
Q Consensus 67 ~~Dls~~~~~~~~~~~~~~~~~~id~li~~ag 98 (298)
..+++ .+.+..++ ...|++|.+..
T Consensus 97 ~~~i~-~~~~~~~~-------~~~DvVi~~~d 120 (228)
T cd00757 97 NERLD-AENAEELI-------AGYDLVLDCTD 120 (228)
T ss_pred cceeC-HHHHHHHH-------hCCCEEEEcCC
Confidence 55553 23333333 36888888764
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.029 Score=44.63 Aligned_cols=85 Identities=13% Similarity=0.076 Sum_probs=58.0
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHH-------HhCCCCeEEEEccCCCHHHHHHHHHH--H
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-------HSLGIPAIGLEGDVRKREDAVRVVES--T 83 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~-------~~~~~~~~~~~~Dls~~~~~~~~~~~--~ 83 (298)
+++-+.|. |-+|..++++|+++|++|++.+|+.++.+++.+.- .+.-.+.+.+..-+.+.+++++++.. +
T Consensus 2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i 80 (163)
T PF03446_consen 2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENI 80 (163)
T ss_dssp BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTH
T ss_pred CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHH
Confidence 35667766 79999999999999999999999988777765431 11001235555678898999999887 6
Q ss_pred HHHhCCccEEEECCC
Q 022386 84 INHFGKLDILVNAAA 98 (298)
Q Consensus 84 ~~~~~~id~li~~ag 98 (298)
.....+=.++|++..
T Consensus 81 ~~~l~~g~iiid~sT 95 (163)
T PF03446_consen 81 LAGLRPGKIIIDMST 95 (163)
T ss_dssp GGGS-TTEEEEE-SS
T ss_pred hhccccceEEEecCC
Confidence 665555566666664
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.073 Score=47.99 Aligned_cols=80 Identities=19% Similarity=0.214 Sum_probs=53.1
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCCh-------------------hHHHHHHHHHHhCCCC--eEEE
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK-------------------TVLRSAVAALHSLGIP--AIGL 66 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~-------------------~~~~~~~~~~~~~~~~--~~~~ 66 (298)
.|++.+|+|.|+ ||+|..+++.|+..|. ++.+++.+. .+.+...+.+.+..+. +..+
T Consensus 25 ~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~ 103 (355)
T PRK05597 25 SLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVS 103 (355)
T ss_pred HHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEE
Confidence 567889999987 8999999999999999 688887753 3455555666655444 4444
Q ss_pred EccCCCHHHHHHHHHHHHHHhCCccEEEECC
Q 022386 67 EGDVRKREDAVRVVESTINHFGKLDILVNAA 97 (298)
Q Consensus 67 ~~Dls~~~~~~~~~~~~~~~~~~id~li~~a 97 (298)
...++.+ ....++ ...|++|.+.
T Consensus 104 ~~~i~~~-~~~~~~-------~~~DvVvd~~ 126 (355)
T PRK05597 104 VRRLTWS-NALDEL-------RDADVILDGS 126 (355)
T ss_pred EeecCHH-HHHHHH-------hCCCEEEECC
Confidence 4455432 222222 2567666665
|
|
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.041 Score=49.23 Aligned_cols=76 Identities=21% Similarity=0.264 Sum_probs=50.5
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
..|++++|+|+ |++|...+..+...|+ +|++++++.++++.. .+.|.+.. .|..+. ++.+. ....+
T Consensus 168 ~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a----~~lGa~~v---i~~~~~-~~~~~----~~~~g 234 (343)
T PRK09880 168 LQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA----REMGADKL---VNPQND-DLDHY----KAEKG 234 (343)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH----HHcCCcEE---ecCCcc-cHHHH----hccCC
Confidence 46899999986 8999999988888899 588888887655432 23343322 243332 23222 22235
Q ss_pred CccEEEECCC
Q 022386 89 KLDILVNAAA 98 (298)
Q Consensus 89 ~id~li~~ag 98 (298)
.+|++|.++|
T Consensus 235 ~~D~vid~~G 244 (343)
T PRK09880 235 YFDVSFEVSG 244 (343)
T ss_pred CCCEEEECCC
Confidence 6999999988
|
|
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.047 Score=47.57 Aligned_cols=76 Identities=18% Similarity=0.257 Sum_probs=52.7
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCC-CHHHHHHHHHHHHHHhCC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR-KREDAVRVVESTINHFGK 89 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls-~~~~~~~~~~~~~~~~~~ 89 (298)
.|+.+.|+|+.| ||.--++.--+.|.+|+++++...+-++..+.+ |.+... |.+ |++.++++.+.+. +.
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~L---GAd~fv---~~~~d~d~~~~~~~~~d---g~ 250 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSL---GADVFV---DSTEDPDIMKAIMKTTD---GG 250 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhc---CcceeE---EecCCHHHHHHHHHhhc---Cc
Confidence 599999999988 998777766678999999999976666655544 544433 667 7777777665322 34
Q ss_pred ccEEEEC
Q 022386 90 LDILVNA 96 (298)
Q Consensus 90 id~li~~ 96 (298)
+|.++|.
T Consensus 251 ~~~v~~~ 257 (360)
T KOG0023|consen 251 IDTVSNL 257 (360)
T ss_pred ceeeeec
Confidence 4444443
|
|
| >TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.043 Score=48.04 Aligned_cols=79 Identities=19% Similarity=0.240 Sum_probs=52.0
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|++++|+|+++++|.+++..+...|++|+++.++.+..+. +...+.+.. .+..+.+....+.+. .. ...+
T Consensus 139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~----~~~~g~~~~---~~~~~~~~~~~~~~~-~~-~~~~ 209 (325)
T TIGR02824 139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAA----CEALGADIA---INYREEDFVEVVKAE-TG-GKGV 209 (325)
T ss_pred CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHH----HHHcCCcEE---EecCchhHHHHHHHH-cC-CCCe
Confidence 47899999999999999999999999999999888665432 223333211 233333333332221 11 1369
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|.+|+++|
T Consensus 210 d~~i~~~~ 217 (325)
T TIGR02824 210 DVILDIVG 217 (325)
T ss_pred EEEEECCc
Confidence 99999987
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized. |
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.03 Score=50.29 Aligned_cols=38 Identities=29% Similarity=0.431 Sum_probs=34.8
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
..|.||++.|.|. |.||+++|+.|...|.+|+.++|+.
T Consensus 155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~ 192 (347)
T PLN02928 155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSW 192 (347)
T ss_pred cCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCC
Confidence 4799999999987 8999999999999999999998874
|
|
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.095 Score=43.63 Aligned_cols=36 Identities=22% Similarity=0.428 Sum_probs=31.5
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR 45 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~ 45 (298)
.|+.++++|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus 25 ~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 25 KLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred HHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 467788999985 8999999999999999 48888887
|
|
| >cd05288 PGDH Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.058 Score=47.68 Aligned_cols=79 Identities=13% Similarity=0.223 Sum_probs=52.0
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|.+++|.|+++++|.+++..+.+.|++|+.+.++.++.+...+. .+.+ .++ |..+.+..+.+ ..... +.+
T Consensus 145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~---~g~~-~~~--~~~~~~~~~~v-~~~~~--~~~ 215 (329)
T cd05288 145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEE---LGFD-AAI--NYKTPDLAEAL-KEAAP--DGI 215 (329)
T ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhh---cCCc-eEE--ecCChhHHHHH-HHhcc--CCc
Confidence 478999999999999999999999999999988876654433221 2321 122 23333322222 22221 479
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|+++++.|
T Consensus 216 d~vi~~~g 223 (329)
T cd05288 216 DVYFDNVG 223 (329)
T ss_pred eEEEEcch
Confidence 99999886
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino |
| >PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.067 Score=49.82 Aligned_cols=78 Identities=22% Similarity=0.244 Sum_probs=50.5
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
+.+|+++|+|.+ ++|.++|+.|+++|+.|++.+..... +..+.+......+.+...... .. .+ ..
T Consensus 3 ~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~--~~~~~l~~~~~gi~~~~g~~~-~~----~~-------~~ 67 (445)
T PRK04308 3 FQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKP--ERVAQIGKMFDGLVFYTGRLK-DA----LD-------NG 67 (445)
T ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCc--hhHHHHhhccCCcEEEeCCCC-HH----HH-------hC
Confidence 678999999986 89999999999999999998876432 112223322112333322211 11 11 36
Q ss_pred ccEEEECCCCCCC
Q 022386 90 LDILVNAAAGNFL 102 (298)
Q Consensus 90 id~li~~ag~~~~ 102 (298)
.|.+|..+|+.+.
T Consensus 68 ~d~vv~spgi~~~ 80 (445)
T PRK04308 68 FDILALSPGISER 80 (445)
T ss_pred CCEEEECCCCCCC
Confidence 7999999997643
|
|
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.019 Score=50.02 Aligned_cols=39 Identities=23% Similarity=0.319 Sum_probs=36.6
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~ 47 (298)
+++||.+.|.|.++-+|+.++..|.++|++|.++.++..
T Consensus 156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~ 194 (301)
T PRK14194 156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST 194 (301)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC
Confidence 789999999999999999999999999999999987754
|
|
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.092 Score=43.36 Aligned_cols=38 Identities=24% Similarity=0.281 Sum_probs=34.4
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
.+|+||.++|.|| |.+|...++.|.+.|++|+++++..
T Consensus 6 l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~ 43 (202)
T PRK06718 6 IDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL 43 (202)
T ss_pred EEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 4789999999998 8899999999999999999998763
|
|
| >PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.02 Score=45.25 Aligned_cols=42 Identities=24% Similarity=0.345 Sum_probs=33.6
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVL 49 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~ 49 (298)
-+++||+++|.|.+.-+|+.++..|.++|++|.++......+
T Consensus 32 ~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l 73 (160)
T PF02882_consen 32 IDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNL 73 (160)
T ss_dssp -STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSH
T ss_pred CCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcc
Confidence 379999999999999999999999999999999988876433
|
Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A .... |
| >cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.053 Score=47.55 Aligned_cols=79 Identities=15% Similarity=0.209 Sum_probs=51.9
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.+++++|+|+++++|.+++..+...|+.|++++++.++.+.+ . +.+.. ..+ |....+..+.+.+ ... ...+
T Consensus 144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~---~~g~~-~~~--~~~~~~~~~~~~~-~~~-~~~~ 214 (328)
T cd08268 144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-L---ALGAA-HVI--VTDEEDLVAEVLR-ITG-GKGV 214 (328)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-H---HcCCC-EEE--ecCCccHHHHHHH-HhC-CCCc
Confidence 578999999999999999999999999999998887654433 2 22321 222 2222222222222 211 1269
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|+++++++
T Consensus 215 d~vi~~~~ 222 (328)
T cd08268 215 DVVFDPVG 222 (328)
T ss_pred eEEEECCc
Confidence 99999887
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.11 Score=47.57 Aligned_cols=41 Identities=24% Similarity=0.382 Sum_probs=35.8
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLR 50 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~ 50 (298)
.+.|++++|.|+. .||+.+++.+...|++|++++++..+++
T Consensus 199 ~l~GktVvViG~G-~IG~~va~~ak~~Ga~ViV~d~d~~R~~ 239 (413)
T cd00401 199 MIAGKVAVVAGYG-DVGKGCAQSLRGQGARVIVTEVDPICAL 239 (413)
T ss_pred CCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECChhhHH
Confidence 4789999999876 7999999999999999999998876544
|
The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+. |
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.078 Score=47.07 Aligned_cols=121 Identities=15% Similarity=0.211 Sum_probs=70.6
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcC-CcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
+.+.+.|+|+ |.+|..++..++..| ..+++++.+.+..+...-++.+.. ........+....+.+ .+..
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~-~~~~~~~~i~~~~d~~--------~l~~ 73 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFS-TLVGSNINILGTNNYE--------DIKD 73 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhc-cccCCCeEEEeCCCHH--------HhCC
Confidence 4678999997 889999999999988 689999998765443333232221 1000001111001122 1237
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccc
Q 022386 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (298)
Q Consensus 90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~ 158 (298)
-|++|.++|..... ..+. .+.+..|. -+.+.+.+.+.+... .+.+++++...
T Consensus 74 ADiVVitag~~~~~---g~~r---~dll~~n~----~i~~~i~~~i~~~~p-------~a~vivvsNP~ 125 (319)
T PTZ00117 74 SDVVVITAGVQRKE---EMTR---EDLLTING----KIMKSVAESVKKYCP-------NAFVICVTNPL 125 (319)
T ss_pred CCEEEECCCCCCCC---CCCH---HHHHHHHH----HHHHHHHHHHHHHCC-------CeEEEEecChH
Confidence 89999999853221 2233 33455565 456666666665431 46677777655
|
|
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.13 Score=46.99 Aligned_cols=72 Identities=19% Similarity=0.329 Sum_probs=53.7
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
+|++++++|.|+ |-+|.-+|++|+++|. .|+++.|+.++.+++++.+. .+....+++...+
T Consensus 175 ~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~----------~~~~~l~el~~~l------- 236 (414)
T COG0373 175 SLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG----------AEAVALEELLEAL------- 236 (414)
T ss_pred ccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC----------CeeecHHHHHHhh-------
Confidence 589999999987 5689999999999996 68899999988888877763 1222223333333
Q ss_pred CCccEEEECCC
Q 022386 88 GKLDILVNAAA 98 (298)
Q Consensus 88 ~~id~li~~ag 98 (298)
...|++|.+.+
T Consensus 237 ~~~DvVissTs 247 (414)
T COG0373 237 AEADVVISSTS 247 (414)
T ss_pred hhCCEEEEecC
Confidence 36888888876
|
|
| >PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.034 Score=48.13 Aligned_cols=40 Identities=18% Similarity=0.289 Sum_probs=36.0
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~ 47 (298)
-+++||.++|.|.+.-+|+-++..|.++|++|.++.....
T Consensus 153 i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~ 192 (285)
T PRK14191 153 IEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTK 192 (285)
T ss_pred CCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcH
Confidence 3789999999999999999999999999999999866543
|
|
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.047 Score=48.27 Aligned_cols=117 Identities=16% Similarity=0.142 Sum_probs=67.5
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCc--EEEEcCCh--hHHHHHHHHHHhC----CCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAA--IAIMGRRK--TVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~--Vv~~~r~~--~~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
+.+.|+|++|.+|..++..|+..|.. |++++++. ++++...-++.+. +.... +..++. .+
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~---i~~~~d--~~------- 68 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAE---IKISSD--LS------- 68 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcE---EEECCC--HH-------
Confidence 46899999999999999999999874 99999954 4443333333321 11111 111111 11
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
.+...|++|.++|... + ...+.. +.++.|+.-... +.+.+.+... .+.+|.+++...
T Consensus 69 -~l~~aDiViitag~p~-~--~~~~r~---dl~~~n~~i~~~----~~~~i~~~~~-------~~~viv~~npvd 125 (309)
T cd05294 69 -DVAGSDIVIITAGVPR-K--EGMSRL---DLAKKNAKIVKK----YAKQIAEFAP-------DTKILVVTNPVD 125 (309)
T ss_pred -HhCCCCEEEEecCCCC-C--CCCCHH---HHHHHHHHHHHH----HHHHHHHHCC-------CeEEEEeCCchH
Confidence 1247999999998632 1 122332 334445544444 4444443321 467888887543
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.13 Score=42.36 Aligned_cols=36 Identities=17% Similarity=0.391 Sum_probs=32.2
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR 45 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~ 45 (298)
.|+.++++|.|+ ||+|..++..|+..|. ++++++.+
T Consensus 18 ~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 18 KLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence 467788999988 7899999999999999 69999987
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.065 Score=37.59 Aligned_cols=36 Identities=28% Similarity=0.491 Sum_probs=31.6
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHc-CCcEEEEcC
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKH-GAAIAIMGR 44 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~-G~~Vv~~~r 44 (298)
.++.+|+++|.|. ++.|+.++..|.+. +.+|.+++|
T Consensus 19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r 55 (86)
T cd05191 19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR 55 (86)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence 4688999999999 99999999999998 557778777
|
Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al |
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.063 Score=47.98 Aligned_cols=40 Identities=23% Similarity=0.253 Sum_probs=36.0
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~ 47 (298)
...|.||++.|.|. |.||+.+|+.|...|.+|++++++..
T Consensus 145 g~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~ 184 (333)
T PRK13243 145 GYDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRK 184 (333)
T ss_pred ccCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCC
Confidence 35799999999998 99999999999999999999998754
|
|
| >PTZ00082 L-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.94 Score=40.26 Aligned_cols=125 Identities=14% Similarity=0.149 Sum_probs=71.9
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhC----CCCeEEEEccCCCHHHHHHHHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
+++.+.+.|.| +|.+|..++..++..|. .|++++.+.+......-++.+. +....... .+|. +
T Consensus 3 ~~~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d~---~------ 70 (321)
T PTZ00082 3 MIKRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNNY---E------ 70 (321)
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCCH---H------
Confidence 45567899999 58899999999999995 8999999877543222222211 11122211 1221 1
Q ss_pred HHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
.+..-|++|+.+|.......++.+.+. .+.+..|+ -+.+.+.+.+.+... .+.+++++....
T Consensus 71 --~l~~aDiVI~tag~~~~~~~~~~~~~r-~~~l~~n~----~i~~~i~~~i~~~~p-------~a~~iv~sNP~d 132 (321)
T PTZ00082 71 --DIAGSDVVIVTAGLTKRPGKSDKEWNR-DDLLPLNA----KIMDEVAEGIKKYCP-------NAFVIVITNPLD 132 (321)
T ss_pred --HhCCCCEEEECCCCCCCCCCCcCCCCH-HHHHHHHH----HHHHHHHHHHHHHCC-------CeEEEEecCcHH
Confidence 124789999999864321111111111 33344454 356667777766531 456777776553
|
|
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.073 Score=54.20 Aligned_cols=76 Identities=14% Similarity=0.194 Sum_probs=59.0
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcC-Cc-------------EEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHH
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHG-AA-------------IAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDA 76 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G-~~-------------Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~ 76 (298)
..|.++|.|+ |.+|+..++.|++.. +. |++++++.+..+++.+.+ .++..+++|++|.+++
T Consensus 568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~----~~~~~v~lDv~D~e~L 642 (1042)
T PLN02819 568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI----ENAEAVQLDVSDSESL 642 (1042)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc----CCCceEEeecCCHHHH
Confidence 3678999997 999999999998753 33 778888876666555543 2467789999999888
Q ss_pred HHHHHHHHHHhCCccEEEECCC
Q 022386 77 VRVVESTINHFGKLDILVNAAA 98 (298)
Q Consensus 77 ~~~~~~~~~~~~~id~li~~ag 98 (298)
.++++ .+|++|++..
T Consensus 643 ~~~v~-------~~DaVIsalP 657 (1042)
T PLN02819 643 LKYVS-------QVDVVISLLP 657 (1042)
T ss_pred HHhhc-------CCCEEEECCC
Confidence 77765 5999999985
|
|
| >cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.075 Score=47.32 Aligned_cols=78 Identities=15% Similarity=0.161 Sum_probs=51.2
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCc-EEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
..|.+++|+|+ +++|..++..+...|++ |++++++.++.+.. .+ .+.+. ..|..+.+ .+++.+ +.. ..
T Consensus 162 ~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~---~ga~~---~i~~~~~~-~~~~~~-~~~-~~ 230 (339)
T cd08239 162 SGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KA---LGADF---VINSGQDD-VQEIRE-LTS-GA 230 (339)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HH---hCCCE---EEcCCcch-HHHHHH-HhC-CC
Confidence 34889999986 89999999998899998 98888887654433 22 34321 12444433 333322 211 12
Q ss_pred CccEEEECCC
Q 022386 89 KLDILVNAAA 98 (298)
Q Consensus 89 ~id~li~~ag 98 (298)
.+|++|.+.|
T Consensus 231 ~~d~vid~~g 240 (339)
T cd08239 231 GADVAIECSG 240 (339)
T ss_pred CCCEEEECCC
Confidence 6999999987
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at |
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.045 Score=45.75 Aligned_cols=43 Identities=28% Similarity=0.308 Sum_probs=37.4
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHH
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL 56 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~ 56 (298)
++.|.||+|.+|.+++..|++.|++|++.+|+.++.+...+..
T Consensus 2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~ 44 (219)
T TIGR01915 2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKA 44 (219)
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHH
Confidence 5889999999999999999999999999999987776665543
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.099 Score=47.33 Aligned_cols=78 Identities=17% Similarity=0.209 Sum_probs=51.4
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCC-HHHHHHHHHHHHHHhC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK-REDAVRVVESTINHFG 88 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~-~~~~~~~~~~~~~~~~ 88 (298)
.|.+++|+|+ +++|...+..+...|+ +|++++++.++++.. .+.+.+. . .|..+ .+++.+.+.++.. +
T Consensus 185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a----~~~Ga~~-~--i~~~~~~~~~~~~v~~~~~--~ 254 (368)
T TIGR02818 185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA----KKLGATD-C--VNPNDYDKPIQEVIVEITD--G 254 (368)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----HHhCCCe-E--EcccccchhHHHHHHHHhC--C
Confidence 4789999975 8999999988888899 688888887654433 2234322 1 23332 2233333333332 3
Q ss_pred CccEEEECCC
Q 022386 89 KLDILVNAAA 98 (298)
Q Consensus 89 ~id~li~~ag 98 (298)
.+|++|.++|
T Consensus 255 g~d~vid~~G 264 (368)
T TIGR02818 255 GVDYSFECIG 264 (368)
T ss_pred CCCEEEECCC
Confidence 7999999988
|
The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols. |
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.15 Score=41.08 Aligned_cols=31 Identities=19% Similarity=0.443 Sum_probs=27.0
Q ss_pred EEEecCCchhHHHHHHHHHHcCC-cEEEEcCCh
Q 022386 15 ALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK 46 (298)
Q Consensus 15 ~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~ 46 (298)
++|.| .||+|..+++.|+..|. ++++++.+.
T Consensus 2 VlViG-~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 2 VGIAG-AGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred EEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 67777 48999999999999999 599998875
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK12480 D-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.1 Score=46.57 Aligned_cols=41 Identities=17% Similarity=0.177 Sum_probs=35.8
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV 48 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~ 48 (298)
...|.|+++.|.|. |.||+++|+.|...|.+|++.+++...
T Consensus 141 ~~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~ 181 (330)
T PRK12480 141 SKPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNK 181 (330)
T ss_pred ccccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence 45789999999976 679999999999999999999988643
|
|
| >PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.057 Score=43.69 Aligned_cols=44 Identities=16% Similarity=0.289 Sum_probs=35.9
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHh
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS 58 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~ 58 (298)
++.|.|+ |.+|..+|..|+..|++|++++++.+.+++..+.+..
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~ 44 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIER 44 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHH
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHH
Confidence 4678887 9999999999999999999999998887777666543
|
1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B .... |
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.19 Score=38.89 Aligned_cols=31 Identities=35% Similarity=0.593 Sum_probs=26.6
Q ss_pred EEEEecCCchhHHHHHHHHHHcCC-cEEEEcCC
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR 45 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~ 45 (298)
+++|.|+ ||+|.++++.|+..|. ++.+++.+
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 3678886 8999999999999999 68888765
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.21 Score=42.46 Aligned_cols=37 Identities=24% Similarity=0.390 Sum_probs=30.7
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCCh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK 46 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~ 46 (298)
.|++.+|+|.|+ ||+|..+++.|+..|. ++++++.+.
T Consensus 21 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ 58 (240)
T TIGR02355 21 ALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDT 58 (240)
T ss_pred HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 467778888865 6999999999999998 688887763
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.12 Score=42.44 Aligned_cols=36 Identities=33% Similarity=0.484 Sum_probs=29.6
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR 45 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~ 45 (298)
.|++++++|.|+ +|+|.++++.|+..|. ++.+++.+
T Consensus 18 ~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d 54 (197)
T cd01492 18 RLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDR 54 (197)
T ss_pred HHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence 356788899975 5699999999999999 58888765
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=95.33 E-value=1.1 Score=39.57 Aligned_cols=117 Identities=9% Similarity=0.105 Sum_probs=74.3
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCC--cEEEEcCChhHHHHHHHHHHhCCC---CeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGI---PAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
...+.|+|+ |.+|..++..|+..|. .+++++.+.+.++....++.+... ....... .|.+ .
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~-----------~ 68 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYS-----------V 68 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHH-----------H
Confidence 357899996 9999999999998876 599999988777777777765421 1111111 1211 1
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
+...|++|..||.... + ..+..+ .+..| .-+++.+.+.+.+... .+.+++++....
T Consensus 69 ~~~adivvitaG~~~k-~--g~~R~d---ll~~N----~~i~~~~~~~i~~~~p-------~~~vivvsNP~d 124 (312)
T cd05293 69 TANSKVVIVTAGARQN-E--GESRLD---LVQRN----VDIFKGIIPKLVKYSP-------NAILLVVSNPVD 124 (312)
T ss_pred hCCCCEEEECCCCCCC-C--CCCHHH---HHHHH----HHHHHHHHHHHHHhCC-------CcEEEEccChHH
Confidence 2478999999996432 1 234433 33344 4456666666665432 577888886554
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.61 Score=41.07 Aligned_cols=121 Identities=11% Similarity=0.155 Sum_probs=69.5
Q ss_pred HHHHHHHHHHcCCcEEEEcCChhHHH-HHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCC
Q 022386 25 GFEISLQLGKHGAAIAIMGRRKTVLR-SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 103 (298)
Q Consensus 25 G~~ia~~l~~~G~~Vv~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~ 103 (298)
|.++|++|++.|++|++.+|+.+..+ +..+.+.+.|... ++ +...+++ ..|++|.+..
T Consensus 32 GspMArnLlkAGheV~V~Drnrsa~e~e~~e~LaeaGA~~----Aa-----S~aEAAa-------~ADVVIL~LP----- 90 (341)
T TIGR01724 32 GSRMAIEFAMAGHDVVLAEPNREFMSDDLWKKVEDAGVKV----VS-----DDKEAAK-------HGEIHVLFTP----- 90 (341)
T ss_pred HHHHHHHHHHCCCEEEEEeCChhhhhhhhhHHHHHCCCee----cC-----CHHHHHh-------CCCEEEEecC-----
Confidence 88999999999999999999876543 3334455544321 11 2333332 5788988875
Q ss_pred CCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHHHHHHHHHHHHHH
Q 022386 104 PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183 (298)
Q Consensus 104 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~l~~~l 183 (298)
+.+..++++ .-+++.+. .|.+|...|.... ..+.+.|
T Consensus 91 -----d~aaV~eVl-----------~GLaa~L~-----------~GaIVID~STIsP----------------~t~~~~~ 127 (341)
T TIGR01724 91 -----FGKGTFSIA-----------RTIIEHVP-----------ENAVICNTCTVSP----------------VVLYYSL 127 (341)
T ss_pred -----CHHHHHHHH-----------HHHHhcCC-----------CCCEEEECCCCCH----------------HHHHHHH
Confidence 223333331 23444443 2445554443332 2333344
Q ss_pred HHHhc-CCCCeEEEEEeCCcccCCccc
Q 022386 184 ALEWG-TDYAIRVNGIAPGPIKDTAGV 209 (298)
Q Consensus 184 a~e~~-~~~girv~~i~PG~v~t~~~~ 209 (298)
-.++. .+..+-|.+.||+.|-....+
T Consensus 128 e~~l~~~r~d~~v~s~HP~~vP~~~~~ 154 (341)
T TIGR01724 128 EKILRLKRTDVGISSMHPAAVPGTPQH 154 (341)
T ss_pred HHHhhcCccccCeeccCCCCCCCCCCC
Confidence 44432 255799999999999644433
|
This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown. |
| >PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.039 Score=48.15 Aligned_cols=37 Identities=24% Similarity=0.260 Sum_probs=34.7
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEc-CC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMG-RR 45 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~-r~ 45 (298)
+++||+++|.|-++-+|+.+|..|+++|++|.++. |+
T Consensus 155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT 192 (296)
T PRK14188 155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRT 192 (296)
T ss_pred CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCC
Confidence 78999999999999999999999999999999995 44
|
|
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.24 Score=37.85 Aligned_cols=78 Identities=18% Similarity=0.404 Sum_probs=53.0
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCCh-------------------hHHHHHHHHHHhCC--CCeEEEEcc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK-------------------TVLRSAVAALHSLG--IPAIGLEGD 69 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~-------------------~~~~~~~~~~~~~~--~~~~~~~~D 69 (298)
.++++|.|+ |++|..+++.|+..|. ++.+++.+. .+.+.+.+.+.+.. .++..+..+
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~ 80 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK 80 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence 456777765 7899999999999999 688887742 34455556666543 456667677
Q ss_pred CCCHHHHHHHHHHHHHHhCCccEEEECCC
Q 022386 70 VRKREDAVRVVESTINHFGKLDILVNAAA 98 (298)
Q Consensus 70 ls~~~~~~~~~~~~~~~~~~id~li~~ag 98 (298)
+ +++....+++ ..|++|.+..
T Consensus 81 ~-~~~~~~~~~~-------~~d~vi~~~d 101 (135)
T PF00899_consen 81 I-DEENIEELLK-------DYDIVIDCVD 101 (135)
T ss_dssp C-SHHHHHHHHH-------TSSEEEEESS
T ss_pred c-cccccccccc-------CCCEEEEecC
Confidence 7 3445555553 6788888764
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.045 Score=42.57 Aligned_cols=41 Identities=24% Similarity=0.364 Sum_probs=33.5
Q ss_pred EEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHH
Q 022386 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH 57 (298)
Q Consensus 15 ~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~ 57 (298)
|+.+|+++-+|+++|.+|.++|.+|+.+ +.+..+.+..++.
T Consensus 1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~~ 41 (164)
T PF12076_consen 1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEAP 41 (164)
T ss_pred CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHcC
Confidence 5789999999999999999999999998 4445555555553
|
This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases []. |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.093 Score=48.87 Aligned_cols=79 Identities=18% Similarity=0.221 Sum_probs=60.2
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
.+..+.++|.|+ |.+|+.+++.|.++|.+|++++++.+..++..+. +..+..+..|.++++.++++- ..
T Consensus 228 ~~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~----~~~~~~i~gd~~~~~~L~~~~------~~ 296 (453)
T PRK09496 228 EKPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEE----LPNTLVLHGDGTDQELLEEEG------ID 296 (453)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH----CCCCeEEECCCCCHHHHHhcC------Cc
Confidence 355789999999 9999999999999999999999997655544332 234667889999998776542 13
Q ss_pred CccEEEECCC
Q 022386 89 KLDILVNAAA 98 (298)
Q Consensus 89 ~id~li~~ag 98 (298)
..|.+|....
T Consensus 297 ~a~~vi~~~~ 306 (453)
T PRK09496 297 EADAFIALTN 306 (453)
T ss_pred cCCEEEECCC
Confidence 6777776554
|
|
| >PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.018 Score=42.05 Aligned_cols=38 Identities=26% Similarity=0.332 Sum_probs=32.5
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
.+++||.+||.|| |.+|..=++.|++.|++|.+++...
T Consensus 3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~ 40 (103)
T PF13241_consen 3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI 40 (103)
T ss_dssp E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence 3789999999998 8899999999999999999999886
|
|
| >cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.14 Score=47.17 Aligned_cols=85 Identities=12% Similarity=0.031 Sum_probs=52.1
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCC---cEEEEcCChhHHHHHHHHHHhC----CCCeEEEEccCCCHHHHHHHHHHH
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGA---AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~---~Vv~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
.|.+++|.|+++++|...+..+...|+ +|++++++.++++...+.+... |.+... .|..+.+++.+.+.++
T Consensus 175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~--i~~~~~~~~~~~v~~~ 252 (410)
T cd08238 175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLY--VNPATIDDLHATLMEL 252 (410)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEE--ECCCccccHHHHHHHH
Confidence 368999999999999998887766654 6889999887766544422111 222222 2433322333333333
Q ss_pred HHHhCCccEEEECCC
Q 022386 84 INHFGKLDILVNAAA 98 (298)
Q Consensus 84 ~~~~~~id~li~~ag 98 (298)
.. ...+|++|.+.|
T Consensus 253 t~-g~g~D~vid~~g 266 (410)
T cd08238 253 TG-GQGFDDVFVFVP 266 (410)
T ss_pred hC-CCCCCEEEEcCC
Confidence 22 136899998876
|
L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found |
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.06 Score=43.46 Aligned_cols=43 Identities=26% Similarity=0.349 Sum_probs=36.7
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV 48 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~ 48 (298)
.....+.|+++.|.|. |.||+++|+.|...|++|+.+++....
T Consensus 29 ~~~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~ 71 (178)
T PF02826_consen 29 FPGRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKP 71 (178)
T ss_dssp TTBS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHH
T ss_pred CCccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCCh
Confidence 4566899999999975 899999999999999999999999764
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >cd08244 MDR_enoyl_red Possible enoyl reductase | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.1 Score=45.94 Aligned_cols=79 Identities=18% Similarity=0.229 Sum_probs=52.1
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.+.+++|+|+++++|.+++..+...|++|+.+.++.++.+.+ + +.+.+. . .|..+.+..+.+.+ .. ....+
T Consensus 142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~---~~g~~~-~--~~~~~~~~~~~~~~-~~-~~~~~ 212 (324)
T cd08244 142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-R---ALGADV-A--VDYTRPDWPDQVRE-AL-GGGGV 212 (324)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-H---HcCCCE-E--EecCCccHHHHHHH-Hc-CCCCc
Confidence 378999999999999999999999999999998887654433 2 233321 2 23333333333222 11 11269
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|+++++.|
T Consensus 213 d~vl~~~g 220 (324)
T cd08244 213 TVVLDGVG 220 (324)
T ss_pred eEEEECCC
Confidence 99999876
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr |
| >cd08290 ETR 2-enoyl thioester reductase (ETR) | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.12 Score=45.97 Aligned_cols=85 Identities=19% Similarity=0.237 Sum_probs=51.5
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|++++|.|+++++|.+++......|++|+++.++.+..++..+.+...+.+..+..-+.+ ..+..+.+..... +.+
T Consensus 146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~i~~~~~--~~~ 222 (341)
T cd08290 146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELR-SLLATELLKSAPG--GRP 222 (341)
T ss_pred CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccc-cccHHHHHHHHcC--CCc
Confidence 5789999999999999999999999999888777653222223333334433222111110 0123333332221 268
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|.++.+.|
T Consensus 223 d~vld~~g 230 (341)
T cd08290 223 KLALNCVG 230 (341)
T ss_pred eEEEECcC
Confidence 99998887
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f |
| >PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.047 Score=47.32 Aligned_cols=39 Identities=23% Similarity=0.382 Sum_probs=35.6
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~ 47 (298)
+++||+++|.|.+.-+|+-++..|.++|++|.++.++..
T Consensus 155 ~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~ 193 (285)
T PRK14189 155 PLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTR 193 (285)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCC
Confidence 789999999999999999999999999999998876543
|
|
| >PLN03139 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.15 E-value=0.11 Score=47.13 Aligned_cols=39 Identities=23% Similarity=0.200 Sum_probs=34.9
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
..+|.||++.|.| .|.||+.+++.|...|.+|+..+++.
T Consensus 194 ~~~L~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~ 232 (386)
T PLN03139 194 AYDLEGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLK 232 (386)
T ss_pred CcCCCCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCC
Confidence 4579999999999 57899999999999999999998763
|
|
| >PTZ00075 Adenosylhomocysteinase; Provisional | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.12 Score=48.01 Aligned_cols=40 Identities=20% Similarity=0.329 Sum_probs=35.2
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV 48 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~ 48 (298)
..|.||+++|.|.+ .||+.+|+.|...|++|+++.++...
T Consensus 250 ~~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~~ 289 (476)
T PTZ00075 250 VMIAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPIC 289 (476)
T ss_pred CCcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 37899999999977 59999999999999999999887543
|
|
| >PLN02740 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.11 Score=47.28 Aligned_cols=78 Identities=14% Similarity=0.233 Sum_probs=51.8
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCH-HHHHHHHHHHHHHhC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR-EDAVRVVESTINHFG 88 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~-~~~~~~~~~~~~~~~ 88 (298)
.|.+++|.|+ +++|..++..+...|+ .|++++++.++++.. .+.+.+. ++ |..+. +++.+.+.++.. +
T Consensus 198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a----~~~Ga~~-~i--~~~~~~~~~~~~v~~~~~--~ 267 (381)
T PLN02740 198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKG----KEMGITD-FI--NPKDSDKPVHERIREMTG--G 267 (381)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH----HHcCCcE-EE--ecccccchHHHHHHHHhC--C
Confidence 4889999985 9999999998888999 588898887655443 2334322 22 43332 123333333332 2
Q ss_pred CccEEEECCC
Q 022386 89 KLDILVNAAA 98 (298)
Q Consensus 89 ~id~li~~ag 98 (298)
.+|++|.++|
T Consensus 268 g~dvvid~~G 277 (381)
T PLN02740 268 GVDYSFECAG 277 (381)
T ss_pred CCCEEEECCC
Confidence 6999999998
|
|
| >cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2 | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.049 Score=45.82 Aligned_cols=37 Identities=19% Similarity=0.335 Sum_probs=33.7
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCc---EEEEcCC
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAA---IAIMGRR 45 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~---Vv~~~r~ 45 (298)
.++++++++|.|+ |+.|++++..|.+.|.+ +++++|+
T Consensus 21 ~~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~ 60 (226)
T cd05311 21 KKIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK 60 (226)
T ss_pred CCccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence 4688999999998 88999999999999985 9999998
|
Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph |
| >cd08300 alcohol_DH_class_III class III alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.11 Score=46.97 Aligned_cols=78 Identities=14% Similarity=0.195 Sum_probs=52.8
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCH-HHHHHHHHHHHHHhC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR-EDAVRVVESTINHFG 88 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~-~~~~~~~~~~~~~~~ 88 (298)
.|.+++|.|+ +++|...+..+...|+ .|++++++.++++.. .+.+.+. + .|..+. +++.+.+.++.. +
T Consensus 186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~----~~lGa~~-~--i~~~~~~~~~~~~v~~~~~--~ 255 (368)
T cd08300 186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA----KKFGATD-C--VNPKDHDKPIQQVLVEMTD--G 255 (368)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH----HHcCCCE-E--EcccccchHHHHHHHHHhC--C
Confidence 4889999975 8999999999989999 688888887665433 2334332 2 243332 234444444433 3
Q ss_pred CccEEEECCC
Q 022386 89 KLDILVNAAA 98 (298)
Q Consensus 89 ~id~li~~ag 98 (298)
.+|+++.+.|
T Consensus 256 g~d~vid~~g 265 (368)
T cd08300 256 GVDYTFECIG 265 (368)
T ss_pred CCcEEEECCC
Confidence 7999999887
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim |
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.084 Score=40.05 Aligned_cols=85 Identities=15% Similarity=0.071 Sum_probs=51.8
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEc-CChhHHHHHHHHHHhC--------CCCeEEEEccCCCHHHHHHHHHHH
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMG-RRKTVLRSAVAALHSL--------GIPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~-r~~~~~~~~~~~~~~~--------~~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
.++-|.|+ |.+|.++++.|.+.|+.|..+. |+....++....+... -.+.+.+-+-+.|. .+...++++
T Consensus 11 l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDd-aI~~va~~L 88 (127)
T PF10727_consen 11 LKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDD-AIAEVAEQL 88 (127)
T ss_dssp -EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CC-HHHHHHHHH
T ss_pred cEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechH-HHHHHHHHH
Confidence 47788887 7889999999999999988765 4444555554443211 12233444455554 688888888
Q ss_pred HHH--hCCccEEEECCCC
Q 022386 84 INH--FGKLDILVNAAAG 99 (298)
Q Consensus 84 ~~~--~~~id~li~~ag~ 99 (298)
... +.+=.+++|+.|-
T Consensus 89 a~~~~~~~g~iVvHtSGa 106 (127)
T PF10727_consen 89 AQYGAWRPGQIVVHTSGA 106 (127)
T ss_dssp HCC--S-TT-EEEES-SS
T ss_pred HHhccCCCCcEEEECCCC
Confidence 765 3344579999984
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.31 Score=43.09 Aligned_cols=118 Identities=15% Similarity=0.183 Sum_probs=69.5
Q ss_pred EEEEecCCchhHHHHHHHHHHcCC--cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
.+.|+|++|.+|.++|..|+.+|. .+++++.+. .+...-++.+.........+. +.++ ..+.+...|
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~~~~~~i~~~~--~~~~-------~~~~~~daD 69 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHIPTAASVKGFS--GEEG-------LENALKGAD 69 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcCCcCceEEEec--CCCc-------hHHHcCCCC
Confidence 378999999999999999998876 689998875 122222222211111111000 0000 123346899
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
++|..||... ++ ..+. .+.++.|+. +++.+.+.+.+... .+.++++|....
T Consensus 70 ivvitaG~~~-~~--g~~R---~dll~~N~~----I~~~i~~~i~~~~p-------~~iiivvsNPvD 120 (312)
T TIGR01772 70 VVVIPAGVPR-KP--GMTR---DDLFNVNAG----IVKDLVAAVAESCP-------KAMILVITNPVN 120 (312)
T ss_pred EEEEeCCCCC-CC--CccH---HHHHHHhHH----HHHHHHHHHHHhCC-------CeEEEEecCchh
Confidence 9999999642 21 2233 334566665 66666666665432 577888887764
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.055 Score=46.88 Aligned_cols=40 Identities=23% Similarity=0.237 Sum_probs=36.5
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~ 47 (298)
-+++||.++|.|-+.-+|+-++..|..+|++|.++.+...
T Consensus 155 i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~ 194 (285)
T PRK10792 155 IDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTK 194 (285)
T ss_pred CCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCC
Confidence 3789999999999999999999999999999999987643
|
|
| >PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.054 Score=46.79 Aligned_cols=39 Identities=21% Similarity=0.183 Sum_probs=35.6
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~ 47 (298)
+++||.++|.|.|.-+|+-++..|.++|++|.++.+...
T Consensus 154 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~ 192 (281)
T PRK14183 154 DVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTK 192 (281)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCc
Confidence 789999999999999999999999999999998866543
|
|
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.23 Score=45.06 Aligned_cols=36 Identities=22% Similarity=0.414 Sum_probs=30.7
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR 45 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~ 45 (298)
.|++.+|+|.|+ ||+|..+++.|+..|. ++++++.+
T Consensus 38 ~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 38 RLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred HhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 466778888876 6999999999999998 78888876
|
|
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.17 Score=43.95 Aligned_cols=37 Identities=22% Similarity=0.239 Sum_probs=31.2
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCCh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK 46 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~ 46 (298)
.|++.+|+|.|+ ||+|-.+++.|+..|. ++.++|.+.
T Consensus 24 kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~ 61 (287)
T PRK08223 24 RLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDV 61 (287)
T ss_pred HHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 466788888876 6899999999999999 688888864
|
|
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.26 Score=40.57 Aligned_cols=36 Identities=33% Similarity=0.544 Sum_probs=29.8
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR 45 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~ 45 (298)
.|++.+++|.|+++ +|.++++.|+..|. ++.+++.+
T Consensus 16 ~L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d 52 (198)
T cd01485 16 KLRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHR 52 (198)
T ss_pred HHhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECC
Confidence 35677888887665 99999999999999 48888765
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.19 Score=44.34 Aligned_cols=31 Identities=32% Similarity=0.460 Sum_probs=26.5
Q ss_pred EEEecCCchhHHHHHHHHHHcCC-cEEEEcCCh
Q 022386 15 ALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK 46 (298)
Q Consensus 15 ~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~ 46 (298)
++|.|+ ||+|-++++.|+..|. ++.+++.+.
T Consensus 2 VlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~ 33 (312)
T cd01489 2 VLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDT 33 (312)
T ss_pred EEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCC
Confidence 677875 8999999999999999 688887753
|
UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.43 Score=39.29 Aligned_cols=71 Identities=25% Similarity=0.271 Sum_probs=47.3
Q ss_pred EEEecCCchhHHHHHHHHHHcCCcEEEEcCChhH-HHHHHHHHH-----------hCCCCeEEEEccCCCHHHHHHHHHH
Q 022386 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-LRSAVAALH-----------SLGIPAIGLEGDVRKREDAVRVVES 82 (298)
Q Consensus 15 ~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~-~~~~~~~~~-----------~~~~~~~~~~~Dls~~~~~~~~~~~ 82 (298)
.+..||+|-||.+++++|++.|++|++.+|+.++ ++...+.+. ....++.++.+-+ +.+...+++
T Consensus 3 ~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP~---~a~~~v~~~ 79 (211)
T COG2085 3 IIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVPF---EAIPDVLAE 79 (211)
T ss_pred EEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEeccH---HHHHhHHHH
Confidence 4566889999999999999999999999777654 343443331 1134566655544 345556666
Q ss_pred HHHHhC
Q 022386 83 TINHFG 88 (298)
Q Consensus 83 ~~~~~~ 88 (298)
+.+.++
T Consensus 80 l~~~~~ 85 (211)
T COG2085 80 LRDALG 85 (211)
T ss_pred HHHHhC
Confidence 666554
|
|
| >PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.052 Score=47.01 Aligned_cols=37 Identities=24% Similarity=0.339 Sum_probs=34.3
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR 45 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~ 45 (298)
+++||.++|.|.|+-+|+.++..|.++|++|.++...
T Consensus 155 ~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~ 191 (284)
T PRK14179 155 ELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSR 191 (284)
T ss_pred CCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCC
Confidence 7899999999999999999999999999999998443
|
|
| >PRK05479 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.24 Score=44.03 Aligned_cols=92 Identities=17% Similarity=0.096 Sum_probs=55.5
Q ss_pred CCCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHH-------Hh--CCCCeEEEEccCCCHH
Q 022386 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-------HS--LGIPAIGLEGDVRKRE 74 (298)
Q Consensus 4 ~~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~-------~~--~~~~~~~~~~Dls~~~ 74 (298)
+.+...|++|++.|.|.. .+|.++++.|.+.|.+|++..++..+..+.+... .+ ...++.++. +-+..
T Consensus 9 d~~~~~L~gktIgIIG~G-smG~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~~s~~eaa~~ADVVvLa--VPd~~ 85 (330)
T PRK05479 9 DADLSLIKGKKVAIIGYG-SQGHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEVLTVAEAAKWADVIMIL--LPDEV 85 (330)
T ss_pred CCChhhhCCCEEEEEeeH-HHHHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCeeCCHHHHHhcCCEEEEc--CCHHH
Confidence 455678899999999755 6999999999999999988777643332222111 11 122333332 33333
Q ss_pred HHHHHH-HHHHHHhCCccEEEECCCC
Q 022386 75 DAVRVV-ESTINHFGKLDILVNAAAG 99 (298)
Q Consensus 75 ~~~~~~-~~~~~~~~~id~li~~ag~ 99 (298)
...++ +++.....+=.++++++|+
T Consensus 86 -~~~V~~~~I~~~Lk~g~iL~~a~G~ 110 (330)
T PRK05479 86 -QAEVYEEEIEPNLKEGAALAFAHGF 110 (330)
T ss_pred -HHHHHHHHHHhcCCCCCEEEECCCC
Confidence 35555 5555443333456778874
|
|
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.95 E-value=0.38 Score=40.57 Aligned_cols=37 Identities=22% Similarity=0.372 Sum_probs=30.7
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCCh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK 46 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~ 46 (298)
.|++++++|.|+ ||+|.++++.|+..|. ++++++.+.
T Consensus 24 ~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ 61 (231)
T PRK08328 24 KLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQT 61 (231)
T ss_pred HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 466788888876 5899999999999999 688888653
|
|
| >KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion] | Back alignment and domain information |
|---|
Probab=94.94 E-value=0.14 Score=43.99 Aligned_cols=83 Identities=19% Similarity=0.276 Sum_probs=65.1
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
|.+++--||++++|+++...-...|.+.+-+-|+.+..+++.+.+++.|.+..+-.-.+.+. -+......++++.
T Consensus 161 GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~-----~~~k~~~~~~~pr 235 (354)
T KOG0025|consen 161 GDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDR-----KMKKFKGDNPRPR 235 (354)
T ss_pred CCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcch-----hhhhhhccCCCce
Confidence 67888899999999999888888899999999999999999999999887655543333333 2232333568899
Q ss_pred EEEECCCC
Q 022386 92 ILVNAAAG 99 (298)
Q Consensus 92 ~li~~ag~ 99 (298)
..+||.|.
T Consensus 236 LalNcVGG 243 (354)
T KOG0025|consen 236 LALNCVGG 243 (354)
T ss_pred EEEeccCc
Confidence 99999984
|
|
| >PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.93 E-value=0.062 Score=46.37 Aligned_cols=39 Identities=18% Similarity=0.282 Sum_probs=36.2
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~ 47 (298)
+++||.++|.|-|.-+|+-++..|.++|++|.++.++..
T Consensus 155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~ 193 (278)
T PRK14172 155 DIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTK 193 (278)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCC
Confidence 789999999999999999999999999999999977654
|
|
| >PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.074 Score=46.07 Aligned_cols=39 Identities=15% Similarity=0.231 Sum_probs=35.7
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~ 47 (298)
+++||.++|.|-|.-+|+-++..|.++|++|.++.....
T Consensus 155 ~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~ 193 (284)
T PRK14190 155 DISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTK 193 (284)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCch
Confidence 789999999999999999999999999999999866543
|
|
| >PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.062 Score=46.51 Aligned_cols=41 Identities=20% Similarity=0.317 Sum_probs=37.2
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVL 49 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~ 49 (298)
+++||.++|.|-|.-+|+-++..|.++|++|.++.+....+
T Consensus 156 ~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l 196 (284)
T PRK14177 156 DVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNL 196 (284)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCH
Confidence 78999999999999999999999999999999998765433
|
|
| >PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.88 E-value=0.065 Score=46.45 Aligned_cols=40 Identities=18% Similarity=0.224 Sum_probs=36.2
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~ 47 (298)
-+++||.++|.|-+.-+|+-++..|..+|++|.++.....
T Consensus 160 i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~ 199 (287)
T PRK14176 160 VDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTD 199 (287)
T ss_pred CCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCC
Confidence 3789999999999999999999999999999999886543
|
|
| >PRK12550 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=94.86 E-value=0.08 Score=45.83 Aligned_cols=44 Identities=18% Similarity=0.251 Sum_probs=37.3
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHH
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAAL 56 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~ 56 (298)
+++++|.|+ ||-+++++..|++.|+ +|.++.|+.++.+++++.+
T Consensus 122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~ 166 (272)
T PRK12550 122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY 166 (272)
T ss_pred CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence 568888886 8899999999999998 5999999988777766654
|
|
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.23 Score=46.17 Aligned_cols=39 Identities=21% Similarity=0.318 Sum_probs=34.2
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHH
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSA 52 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~ 52 (298)
++.|.||+|++|..+++.|.++|++|++++|+.+...+.
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~ 40 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEV 40 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHH
Confidence 689999999999999999999999999999987654433
|
|
| >cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.18 Score=44.46 Aligned_cols=76 Identities=14% Similarity=0.085 Sum_probs=49.5
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
+++++|.|+++++|.+++......|++|+++.++.++.+.. .+.+.+. + .|..+. . ...+.... .+.+|
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~-v--~~~~~~-~-~~~~~~~~--~~~~d 215 (326)
T cd08289 147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL----KKLGAKE-V--IPREEL-Q-EESIKPLE--KQRWA 215 (326)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH----HHcCCCE-E--EcchhH-H-HHHHHhhc--cCCcC
Confidence 67999999999999999999989999999888887654433 2334321 1 222222 1 12222221 14689
Q ss_pred EEEECCC
Q 022386 92 ILVNAAA 98 (298)
Q Consensus 92 ~li~~ag 98 (298)
+++.+.|
T Consensus 216 ~vld~~g 222 (326)
T cd08289 216 GAVDPVG 222 (326)
T ss_pred EEEECCc
Confidence 9888876
|
yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH |
| >COG2130 Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.82 E-value=0.17 Score=43.91 Aligned_cols=110 Identities=14% Similarity=0.164 Sum_probs=72.3
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
+-+|.|++|++|+|..|.-+...-.-+|++|+-+.-..++..-+.+++ +-+ ...|-..+ ++.+.+++..- .
T Consensus 148 pk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~l---GfD---~~idyk~~-d~~~~L~~a~P--~ 218 (340)
T COG2130 148 PKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEEL---GFD---AGIDYKAE-DFAQALKEACP--K 218 (340)
T ss_pred CCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhc---CCc---eeeecCcc-cHHHHHHHHCC--C
Confidence 345999999999999998766655567999999888877655544443 211 12355544 33333333221 3
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
.||+.+-|.|.. +..++++.|.. .++|+.++-++.+...
T Consensus 219 GIDvyfeNVGg~--------------------------v~DAv~~~ln~----------~aRi~~CG~IS~YN~~ 257 (340)
T COG2130 219 GIDVYFENVGGE--------------------------VLDAVLPLLNL----------FARIPVCGAISQYNAP 257 (340)
T ss_pred CeEEEEEcCCch--------------------------HHHHHHHhhcc----------ccceeeeeehhhcCCC
Confidence 899999999841 23456677765 4778888777766443
|
|
| >PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.07 Score=46.28 Aligned_cols=39 Identities=18% Similarity=0.299 Sum_probs=36.2
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~ 47 (298)
+++||.++|.|.|.-+|+-++..|.++|++|.++.+...
T Consensus 152 ~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~ 190 (287)
T PRK14173 152 PLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQ 190 (287)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCC
Confidence 789999999999999999999999999999999877654
|
|
| >PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.78 E-value=0.07 Score=46.15 Aligned_cols=39 Identities=23% Similarity=0.244 Sum_probs=36.2
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~ 47 (298)
+++||.++|.|.|.-+|+-++..|.++|++|.++.+...
T Consensus 155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~ 193 (282)
T PRK14180 155 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTT 193 (282)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCC
Confidence 789999999999999999999999999999999877654
|
|
| >COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.78 Score=37.13 Aligned_cols=81 Identities=23% Similarity=0.201 Sum_probs=61.8
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
..++++||+|+=-|+..|+ ++-..+-.|+ .|+.++.+.+.++-..+......+++.|+.+|+++..
T Consensus 40 ~~g~l~g~~V~DlG~GTG~---La~ga~~lGa~~V~~vdiD~~a~ei~r~N~~~l~g~v~f~~~dv~~~~---------- 106 (198)
T COG2263 40 LRGDLEGKTVLDLGAGTGI---LAIGAALLGASRVLAVDIDPEALEIARANAEELLGDVEFVVADVSDFR---------- 106 (198)
T ss_pred HcCCcCCCEEEEcCCCcCH---HHHHHHhcCCcEEEEEecCHHHHHHHHHHHHhhCCceEEEEcchhhcC----------
Confidence 4578999999999988774 2223334576 6999999988877777777667788999999998653
Q ss_pred HHhCCccEEEECCCCCCC
Q 022386 85 NHFGKLDILVNAAAGNFL 102 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~ 102 (298)
++.|.+|-|.-+...
T Consensus 107 ---~~~dtvimNPPFG~~ 121 (198)
T COG2263 107 ---GKFDTVIMNPPFGSQ 121 (198)
T ss_pred ---CccceEEECCCCccc
Confidence 578889999865443
|
|
| >cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Probab=94.72 E-value=0.15 Score=44.87 Aligned_cols=79 Identities=13% Similarity=0.199 Sum_probs=51.4
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|.+++|.|+++++|.+++......|+.|+++.++.++.+.+. +.+.+ .++ +..+. +..+.+.+... ..++
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~-~~~~~i~~~~~-~~~~ 209 (324)
T cd08292 139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELR----ALGIG-PVV--STEQP-GWQDKVREAAG-GAPI 209 (324)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHH----hcCCC-EEE--cCCCc-hHHHHHHHHhC-CCCC
Confidence 4789999999999999999998899999998888766544432 23332 122 22222 22222222221 1269
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|+++.+.|
T Consensus 210 d~v~d~~g 217 (324)
T cd08292 210 SVALDSVG 217 (324)
T ss_pred cEEEECCC
Confidence 99999887
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina |
| >cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Probab=94.71 E-value=0.24 Score=43.77 Aligned_cols=78 Identities=15% Similarity=0.180 Sum_probs=50.8
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|.+++|.|+++++|.+++......|++|+++.++.++.+.+ .+.+.+. .+ |..+. +..+.+..... ..+
T Consensus 139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~-v~--~~~~~-~~~~~~~~~~~--~~v 208 (329)
T cd08250 139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL----KSLGCDR-PI--NYKTE-DLGEVLKKEYP--KGV 208 (329)
T ss_pred CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH----HHcCCce-EE--eCCCc-cHHHHHHHhcC--CCC
Confidence 478999999999999999988888999999888876544333 2333321 12 22222 22233332221 469
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|.++++.|
T Consensus 209 d~v~~~~g 216 (329)
T cd08250 209 DVVYESVG 216 (329)
T ss_pred eEEEECCc
Confidence 99998876
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.70 E-value=0.076 Score=45.96 Aligned_cols=40 Identities=23% Similarity=0.303 Sum_probs=36.5
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV 48 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~ 48 (298)
++.||.++|.|-|.-+|+-++..|.++|++|.++......
T Consensus 154 ~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~ 193 (284)
T PRK14170 154 QIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKD 193 (284)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCC
Confidence 7899999999999999999999999999999998776543
|
|
| >TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=94.69 E-value=0.34 Score=43.40 Aligned_cols=40 Identities=23% Similarity=0.354 Sum_probs=34.8
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHH
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRS 51 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~ 51 (298)
.|.+++|.|+ +++|..++..+...|++|++++++.++++.
T Consensus 166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~ 205 (349)
T TIGR03201 166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEM 205 (349)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHH
Confidence 4889999999 999999999998999999999888766543
|
Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. |
| >cd08241 QOR1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.21 Score=43.53 Aligned_cols=79 Identities=20% Similarity=0.295 Sum_probs=50.6
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|.+++|+|+++++|.+++..+...|+.|+.+.++.+..+.. ...+.+. .+ +..+.+..+. +..... ...+
T Consensus 139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~-~~--~~~~~~~~~~-i~~~~~-~~~~ 209 (323)
T cd08241 139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA----RALGADH-VI--DYRDPDLRER-VKALTG-GRGV 209 (323)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH----HHcCCce-ee--ecCCccHHHH-HHHHcC-CCCc
Confidence 578999999999999999999999999999988886544333 2233222 22 2222222222 222211 1369
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|.++++.|
T Consensus 210 d~v~~~~g 217 (323)
T cd08241 210 DVVYDPVG 217 (323)
T ss_pred EEEEECcc
Confidence 99999886
|
QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic |
| >cd00300 LDH_like L-lactate dehydrogenase-like enzymes | Back alignment and domain information |
|---|
Probab=94.67 E-value=0.69 Score=40.67 Aligned_cols=114 Identities=17% Similarity=0.225 Sum_probs=71.2
Q ss_pred EEEecCCchhHHHHHHHHHHcC--CcEEEEcCChhHHHHHHHHHHhCCCC---eEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 15 ALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSLGIP---AIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 15 ~lVtG~t~giG~~ia~~l~~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~~---~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
+.|.|+ |++|..++..|+..| ..+++++.+.+..+....++.+.... .....+ .+ . +.+..
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~---~--------~~l~~ 66 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GD---Y--------ADAAD 66 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CC---H--------HHhCC
Confidence 357776 679999999999998 47999999988877777777664221 111111 11 1 12347
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
-|++|.++|.... + ..+.. ..+..| .-+++.+.+.+++... .+.+++++....
T Consensus 67 aDiVIitag~p~~-~--~~~R~---~l~~~n----~~i~~~~~~~i~~~~p-------~~~viv~sNP~d 119 (300)
T cd00300 67 ADIVVITAGAPRK-P--GETRL---DLINRN----APILRSVITNLKKYGP-------DAIILVVSNPVD 119 (300)
T ss_pred CCEEEEcCCCCCC-C--CCCHH---HHHHHH----HHHHHHHHHHHHHhCC-------CeEEEEccChHH
Confidence 9999999986422 1 22333 233333 4456666666665431 577888876553
|
Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot |
| >PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.66 E-value=0.079 Score=46.19 Aligned_cols=41 Identities=27% Similarity=0.314 Sum_probs=36.8
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVL 49 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~ 49 (298)
+++||.++|.|-|.-+|+-++..|.++|++|.++.+....+
T Consensus 155 ~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l 195 (297)
T PRK14186 155 DIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDL 195 (297)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCH
Confidence 78999999999999999999999999999999987665433
|
|
| >TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent | Back alignment and domain information |
|---|
Probab=94.64 E-value=0.5 Score=43.23 Aligned_cols=80 Identities=19% Similarity=0.257 Sum_probs=47.8
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEE-cCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
.|.+++| .|.++||..++..+...|+.++++ +++.++++. ..+.+.+ . .|..+..+..+.+.++.. ...
T Consensus 185 ~g~~VlV-~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~----a~~~Ga~--~--v~~~~~~~~~~~v~~~~~-~~g 254 (393)
T TIGR02819 185 PGSTVYI-AGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQ----ARSFGCE--T--VDLSKDATLPEQIEQILG-EPE 254 (393)
T ss_pred CCCEEEE-ECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHH----HHHcCCe--E--EecCCcccHHHHHHHHcC-CCC
Confidence 4789999 556999999998888899986554 455433332 2333442 1 233322233333333222 136
Q ss_pred ccEEEECCCCC
Q 022386 90 LDILVNAAAGN 100 (298)
Q Consensus 90 id~li~~ag~~ 100 (298)
+|++|.+.|..
T Consensus 255 ~Dvvid~~G~~ 265 (393)
T TIGR02819 255 VDCAVDCVGFE 265 (393)
T ss_pred CcEEEECCCCc
Confidence 99999999853
|
Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent. |
| >PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.62 E-value=0.085 Score=45.64 Aligned_cols=39 Identities=18% Similarity=0.290 Sum_probs=35.9
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~ 47 (298)
+++||.++|.|-|.-+|+-++..|..+|++|.++.+...
T Consensus 153 ~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~ 191 (282)
T PRK14169 153 DVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTR 191 (282)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCC
Confidence 789999999999999999999999999999999876554
|
|
| >PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.61 E-value=0.08 Score=45.91 Aligned_cols=39 Identities=23% Similarity=0.313 Sum_probs=36.1
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~ 47 (298)
+++||.++|.|-|.-+|+-++..|.++|++|.++.+...
T Consensus 156 ~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~ 194 (288)
T PRK14171 156 NLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKTH 194 (288)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCC
Confidence 789999999999999999999999999999999876654
|
|
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=94.61 E-value=2.7 Score=37.85 Aligned_cols=116 Identities=13% Similarity=0.173 Sum_probs=73.8
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCC--cEEEEcCChhHHHHHHHHHHhCC---CCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
+.+.|+|+ |.+|..++..|+..|. .+++++.+.+.++...-++.+.. .... +..+ .+. + .+
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~-i~~~-~dy-------~----~~ 103 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTK-ILAS-TDY-------A----VT 103 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCE-EEeC-CCH-------H----Hh
Confidence 68999996 9999999999998876 59999998877777766666532 1121 1110 111 1 13
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
..-|++|..||... ++ ..+..+ .+.. ..-+++.+.+.+.+... .+.+++++....
T Consensus 104 ~daDiVVitAG~~~-k~--g~tR~d---ll~~----N~~I~~~i~~~I~~~~p-------~~ivivvtNPvd 158 (350)
T PLN02602 104 AGSDLCIVTAGARQ-IP--GESRLN---LLQR----NVALFRKIIPELAKYSP-------DTILLIVSNPVD 158 (350)
T ss_pred CCCCEEEECCCCCC-Cc--CCCHHH---HHHH----HHHHHHHHHHHHHHHCC-------CeEEEEecCchH
Confidence 47999999999632 21 234433 3333 34456666666665431 577888876553
|
|
| >cd05290 LDH_3 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=94.59 E-value=2.1 Score=37.80 Aligned_cols=115 Identities=16% Similarity=0.187 Sum_probs=73.5
Q ss_pred EEEecCCchhHHHHHHHHHHcCC--cEEEEcCChhHHHHHHHHHHhCC-----CCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 15 ALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLG-----IPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 15 ~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
+.|.|+ |.+|..+|..|+.+|. .+++++.+.+..+...-++.+.. .++..... + . +.+
T Consensus 2 i~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~---~-------y----~~~ 66 (307)
T cd05290 2 LVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAG---D-------Y----DDC 66 (307)
T ss_pred EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEEC---C-------H----HHh
Confidence 578887 9999999999998887 59999998877777767676531 12333322 2 1 223
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
..-|++|..||... ++ ..+.+ -.+.++.| ..+++.+.+.+.+... .+.++.+|....
T Consensus 67 ~~aDivvitaG~~~-kp--g~tr~-R~dll~~N----~~I~~~i~~~i~~~~p-------~~i~ivvsNPvD 123 (307)
T cd05290 67 ADADIIVITAGPSI-DP--GNTDD-RLDLAQTN----AKIIREIMGNITKVTK-------EAVIILITNPLD 123 (307)
T ss_pred CCCCEEEECCCCCC-CC--CCCch-HHHHHHHH----HHHHHHHHHHHHHhCC-------CeEEEEecCcHH
Confidence 47999999999632 22 12310 12233444 4567777777776542 466777776653
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd08301 alcohol_DH_plants Plant alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=94.59 E-value=0.21 Score=45.14 Aligned_cols=78 Identities=15% Similarity=0.269 Sum_probs=51.9
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCH-HHHHHHHHHHHHHhC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR-EDAVRVVESTINHFG 88 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~-~~~~~~~~~~~~~~~ 88 (298)
.|.+++|.|+ +++|..++..+...|+ +|++++++.++.+.+ .+.+... ++ |..+. +++.+.+.++.. +
T Consensus 187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~----~~~Ga~~-~i--~~~~~~~~~~~~v~~~~~--~ 256 (369)
T cd08301 187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA----KKFGVTE-FV--NPKDHDKPVQEVIAEMTG--G 256 (369)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----HHcCCce-EE--cccccchhHHHHHHHHhC--C
Confidence 5889999985 8999999988888999 799998887654432 3334322 22 33321 234444444433 3
Q ss_pred CccEEEECCC
Q 022386 89 KLDILVNAAA 98 (298)
Q Consensus 89 ~id~li~~ag 98 (298)
.+|+++.+.|
T Consensus 257 ~~d~vid~~G 266 (369)
T cd08301 257 GVDYSFECTG 266 (369)
T ss_pred CCCEEEECCC
Confidence 6999999887
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the |
| >PRK14851 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.58 E-value=0.31 Score=47.71 Aligned_cols=80 Identities=11% Similarity=0.184 Sum_probs=52.2
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCCh-------------------hHHHHHHHHHHhCC--CCeEEE
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK-------------------TVLRSAVAALHSLG--IPAIGL 66 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~-------------------~~~~~~~~~~~~~~--~~~~~~ 66 (298)
.|++.+|+|.| .||+|-.++..|+..|. ++++++.+. .+.+...+.+.+.+ .++..+
T Consensus 40 kL~~~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~ 118 (679)
T PRK14851 40 RLAEAKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPF 118 (679)
T ss_pred HHhcCeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEE
Confidence 46788999998 67999999999999999 688887642 23333444444443 345566
Q ss_pred EccCCCHHHHHHHHHHHHHHhCCccEEEECC
Q 022386 67 EGDVRKREDAVRVVESTINHFGKLDILVNAA 97 (298)
Q Consensus 67 ~~Dls~~~~~~~~~~~~~~~~~~id~li~~a 97 (298)
...++ ++.+..+++ .+|++|.+.
T Consensus 119 ~~~i~-~~n~~~~l~-------~~DvVid~~ 141 (679)
T PRK14851 119 PAGIN-ADNMDAFLD-------GVDVVLDGL 141 (679)
T ss_pred ecCCC-hHHHHHHHh-------CCCEEEECC
Confidence 66665 334444443 566666544
|
|
| >COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=94.57 E-value=0.22 Score=44.22 Aligned_cols=42 Identities=24% Similarity=0.296 Sum_probs=36.4
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~ 47 (298)
+...++.||++-|.| .|.||+++|+.+...|.+|+..+|+..
T Consensus 139 ~~~~~l~gktvGIiG-~GrIG~avA~r~~~Fgm~v~y~~~~~~ 180 (324)
T COG1052 139 LLGFDLRGKTLGIIG-LGRIGQAVARRLKGFGMKVLYYDRSPN 180 (324)
T ss_pred ccccCCCCCEEEEEC-CCHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 344589999999997 578999999999999999999998864
|
|
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=94.53 E-value=0.9 Score=42.10 Aligned_cols=115 Identities=14% Similarity=0.090 Sum_probs=75.1
Q ss_pred cEEEEecCCchhHHHHHHHHHHc-------CC--cEEEEcCChhHHHHHHHHHHhCC----CCeEEEEccCCCHHHHHHH
Q 022386 13 KVALLTGGGSGIGFEISLQLGKH-------GA--AIAIMGRRKTVLRSAVAALHSLG----IPAIGLEGDVRKREDAVRV 79 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~-------G~--~Vv~~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dls~~~~~~~~ 79 (298)
-.+.|+|++|.+|.+++..|+.. |. ++++++++.+.++...-++.+.. .++.. .. .+
T Consensus 101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i-~~--~~------- 170 (444)
T PLN00112 101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSI-GI--DP------- 170 (444)
T ss_pred eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEE-ec--CC-------
Confidence 47899999999999999999988 66 68999999888888777776542 11111 11 11
Q ss_pred HHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh-cCCCCCCCCCCcEEEEecccc
Q 022386 80 VESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKK-GGRGQASSSSGGIIINISATL 158 (298)
Q Consensus 80 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~~~~~~~g~iv~vss~~ 158 (298)
.+.+...|++|..||... ++ ..+..+ .++.|. -+++.+.+.+.+ ... .+.+|.++...
T Consensus 171 ----ye~~kdaDiVVitAG~pr-kp--G~tR~d---Ll~~N~----~I~k~i~~~I~~~a~p-------~~ivIVVsNPv 229 (444)
T PLN00112 171 ----YEVFQDAEWALLIGAKPR-GP--GMERAD---LLDING----QIFAEQGKALNEVASR-------NVKVIVVGNPC 229 (444)
T ss_pred ----HHHhCcCCEEEECCCCCC-CC--CCCHHH---HHHHHH----HHHHHHHHHHHHhcCC-------CeEEEEcCCcH
Confidence 123357999999999632 22 234433 444554 455666666665 221 57777777654
|
|
| >PLN02586 probable cinnamyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=94.53 E-value=0.21 Score=45.02 Aligned_cols=74 Identities=18% Similarity=0.270 Sum_probs=47.9
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|++++|.|+ +++|..++......|++|++++.+.++..+..+ +.+.+.. + |..+.+.+.+ ..+.+
T Consensus 183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~---~~Ga~~v-i--~~~~~~~~~~-------~~~~~ 248 (360)
T PLN02586 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAIN---RLGADSF-L--VSTDPEKMKA-------AIGTM 248 (360)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHH---hCCCcEE-E--cCCCHHHHHh-------hcCCC
Confidence 5889999765 899999999888899998888776554333322 3343221 2 3333322222 12468
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|++|.+.|
T Consensus 249 D~vid~~g 256 (360)
T PLN02586 249 DYIIDTVS 256 (360)
T ss_pred CEEEECCC
Confidence 99999887
|
|
| >cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=94.51 E-value=0.14 Score=42.67 Aligned_cols=38 Identities=18% Similarity=0.373 Sum_probs=31.7
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEE-EcCCh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRK 46 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~-~~r~~ 46 (298)
.+|+|++++|.| .|.+|+++|+.|.++|+.|+. .+.+.
T Consensus 19 ~~l~g~~vaIqG-fGnVG~~~a~~L~~~G~~vV~vsD~~g 57 (217)
T cd05211 19 DSLEGLTVAVQG-LGNVGWGLAKKLAEEGGKVLAVSDPDG 57 (217)
T ss_pred CCcCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEEcCCC
Confidence 478999999998 689999999999999997665 45443
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral |
| >TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=94.51 E-value=0.17 Score=45.52 Aligned_cols=78 Identities=15% Similarity=0.203 Sum_probs=49.3
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCc-EEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
.|.+++|.|+ +++|..++......|+. |++++++.++.+.+ .+.+.+. ++ |..+++..+.+ .+... -..
T Consensus 176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~----~~~Ga~~-~i--~~~~~~~~~~i-~~~~~-~~g 245 (358)
T TIGR03451 176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA----REFGATH-TV--NSSGTDPVEAI-RALTG-GFG 245 (358)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----HHcCCce-EE--cCCCcCHHHHH-HHHhC-CCC
Confidence 4789999975 99999999888889996 88888876654433 2334322 22 44333222222 22211 125
Q ss_pred ccEEEECCC
Q 022386 90 LDILVNAAA 98 (298)
Q Consensus 90 id~li~~ag 98 (298)
+|++|.+.|
T Consensus 246 ~d~vid~~g 254 (358)
T TIGR03451 246 ADVVIDAVG 254 (358)
T ss_pred CCEEEECCC
Confidence 899999887
|
Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione. |
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=94.51 E-value=0.35 Score=39.98 Aligned_cols=59 Identities=22% Similarity=0.314 Sum_probs=41.9
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCC
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls 71 (298)
.+|+||.++|.||+ .+|..-++.|++.|+.|++++.+.. +++ ..+.+.+ ++.++.-+..
T Consensus 5 l~l~gk~vlVvGgG-~va~rk~~~Ll~~ga~VtVvsp~~~--~~l-~~l~~~~-~i~~~~~~~~ 63 (205)
T TIGR01470 5 ANLEGRAVLVVGGG-DVALRKARLLLKAGAQLRVIAEELE--SEL-TLLAEQG-GITWLARCFD 63 (205)
T ss_pred EEcCCCeEEEECcC-HHHHHHHHHHHHCCCEEEEEcCCCC--HHH-HHHHHcC-CEEEEeCCCC
Confidence 46899999999864 5689999999999999999987643 122 2232322 5666665554
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.49 E-value=0.2 Score=41.69 Aligned_cols=200 Identities=15% Similarity=0.027 Sum_probs=117.9
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
+++++-...++-|+.+..|.++++.-...|..|.++.|+..+ ..+..+...+.|++.|.-...-.+...
T Consensus 47 ~~dve~e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k-----~~l~sw~~~vswh~gnsfssn~~k~~l------ 115 (283)
T KOG4288|consen 47 KQDVEVEWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENK-----QTLSSWPTYVSWHRGNSFSSNPNKLKL------ 115 (283)
T ss_pred hhhhhHHHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCc-----chhhCCCcccchhhccccccCcchhhh------
Confidence 345554567889999999999999999999999999998541 223344556777777665443222221
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
..+..++.++|... ....+-.+|-.......++....- -.++|+||....-.+....
T Consensus 116 -~g~t~v~e~~ggfg----------n~~~m~~ing~ani~a~kaa~~~g------------v~~fvyISa~d~~~~~~i~ 172 (283)
T KOG4288|consen 116 -SGPTFVYEMMGGFG----------NIILMDRINGTANINAVKAAAKAG------------VPRFVYISAHDFGLPPLIP 172 (283)
T ss_pred -cCCcccHHHhcCcc----------chHHHHHhccHhhHHHHHHHHHcC------------CceEEEEEhhhcCCCCccc
Confidence 25555666666422 123344556556555566555332 3569999887663333333
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC-----hHHHHHHHhh-------hcc-----CCC
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATD-------YMA-----AYK 229 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~-----~~~~~~~~~~-------~~~-----~~~ 229 (298)
..|--+|.+.+.-.. . .++.|-..+.||++.......... -.+..+...+ ..+ +..
T Consensus 173 rGY~~gKR~AE~Ell------~-~~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~p 245 (283)
T KOG4288|consen 173 RGYIEGKREAEAELL------K-KFRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAP 245 (283)
T ss_pred hhhhccchHHHHHHH------H-hcCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCC
Confidence 468888876543221 1 345677889999998652211110 0111111111 111 123
Q ss_pred CCCHHHHHHHHHHhcCCC
Q 022386 230 FGEKWDIAMAALYLASDA 247 (298)
Q Consensus 230 ~~~~~dva~~~~~L~s~~ 247 (298)
....++||.+++..++++
T Consensus 246 pvnve~VA~aal~ai~dp 263 (283)
T KOG4288|consen 246 PVNVESVALAALKAIEDP 263 (283)
T ss_pred CcCHHHHHHHHHHhccCC
Confidence 446788998888888764
|
|
| >cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=94.49 E-value=0.35 Score=42.22 Aligned_cols=76 Identities=18% Similarity=0.278 Sum_probs=50.1
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|.+++|.|+++++|.+++......|++|+.+.++.++.+.+ .+.+.+.. +. + +. +....+.+. -.++
T Consensus 142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~~-~~-~--~~-~~~~~i~~~---~~~~ 209 (320)
T cd08243 142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL----KELGADEV-VI-D--DG-AIAEQLRAA---PGGF 209 (320)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HhcCCcEE-Ee-c--Cc-cHHHHHHHh---CCCc
Confidence 478999999999999999999999999998888876543322 23343222 11 1 11 222222222 2479
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|.++++.|
T Consensus 210 d~vl~~~~ 217 (320)
T cd08243 210 DKVLELVG 217 (320)
T ss_pred eEEEECCC
Confidence 99998886
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >PLN02775 Probable dihydrodipicolinate reductase | Back alignment and domain information |
|---|
Probab=94.48 E-value=0.97 Score=39.20 Aligned_cols=93 Identities=9% Similarity=0.005 Sum_probs=63.5
Q ss_pred CCCCCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEE-EcCCh-------------------hHHHHHHHHHHhCCC
Q 022386 2 ESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRK-------------------TVLRSAVAALHSLGI 61 (298)
Q Consensus 2 ~~~~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~-~~r~~-------------------~~~~~~~~~~~~~~~ 61 (298)
.++++..... -.++|.|++|-+|+++++...+.+..++. +++.. ..+++....+.+..
T Consensus 2 ~~~~~~~~~~-i~V~V~Ga~G~MG~~~~~av~~~~~~Lv~~~~~~~~~~~~~~~~~g~~v~~~~~~dl~~~l~~~~~~~- 79 (286)
T PLN02775 2 ASTASPPGSA-IPIMVNGCTGKMGHAVAEAAVSAGLQLVPVSFTGPAGVGVTVEVCGVEVRLVGPSEREAVLSSVKAEY- 79 (286)
T ss_pred CCcCCCcCCC-CeEEEECCCChHHHHHHHHHhcCCCEEEEEeccccccccccceeccceeeeecCccHHHHHHHhhccC-
Confidence 3444444333 48999999999999999999998888765 33221 12222332332223
Q ss_pred CeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEECCCC
Q 022386 62 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG 99 (298)
Q Consensus 62 ~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~ag~ 99 (298)
...+..|+|.++.+...++...+. ++..+|-..|+
T Consensus 80 -~~~VvIDFT~P~a~~~~~~~~~~~--g~~~VvGTTG~ 114 (286)
T PLN02775 80 -PNLIVVDYTLPDAVNDNAELYCKN--GLPFVMGTTGG 114 (286)
T ss_pred -CCEEEEECCChHHHHHHHHHHHHC--CCCEEEECCCC
Confidence 333556999999999998888765 78889988885
|
|
| >cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1 | Back alignment and domain information |
|---|
Probab=94.46 E-value=0.28 Score=43.34 Aligned_cols=77 Identities=17% Similarity=0.168 Sum_probs=47.0
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
++++++||++++|..++......|++|+++.++.++.+.+ .+.+.+. ++ |..+.+-.+. +.+.... ..+|+
T Consensus 145 ~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~----~~~g~~~-~i--~~~~~~~~~~-v~~~~~~-~~~d~ 215 (324)
T cd08291 145 KAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLL----KKIGAEY-VL--NSSDPDFLED-LKELIAK-LNATI 215 (324)
T ss_pred cEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCCcE-EE--ECCCccHHHH-HHHHhCC-CCCcE
Confidence 4445559999999999887778899999888886654433 2234332 22 2233222222 2222211 36999
Q ss_pred EEECCC
Q 022386 93 LVNAAA 98 (298)
Q Consensus 93 li~~ag 98 (298)
++.+.|
T Consensus 216 vid~~g 221 (324)
T cd08291 216 FFDAVG 221 (324)
T ss_pred EEECCC
Confidence 999887
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin |
| >cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) | Back alignment and domain information |
|---|
Probab=94.46 E-value=0.23 Score=45.00 Aligned_cols=77 Identities=21% Similarity=0.273 Sum_probs=49.6
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
.|.+++|.|+ +++|..++..+...|+ .|++++++.++++-. .+.+.+. + .|..+++-.+. +.++.. +.
T Consensus 191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a----~~~Ga~~-~--i~~~~~~~~~~-i~~~~~--~g 259 (371)
T cd08281 191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA----RELGATA-T--VNAGDPNAVEQ-VRELTG--GG 259 (371)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH----HHcCCce-E--eCCCchhHHHH-HHHHhC--CC
Confidence 4789999985 8999999888888999 588888877654432 2334322 1 24443322222 222222 36
Q ss_pred ccEEEECCC
Q 022386 90 LDILVNAAA 98 (298)
Q Consensus 90 id~li~~ag 98 (298)
+|++|.+.|
T Consensus 260 ~d~vid~~G 268 (371)
T cd08281 260 VDYAFEMAG 268 (371)
T ss_pred CCEEEECCC
Confidence 999999987
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd |
| >PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+) | Back alignment and domain information |
|---|
Probab=94.45 E-value=0.093 Score=45.77 Aligned_cols=40 Identities=30% Similarity=0.440 Sum_probs=36.6
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV 48 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~ 48 (298)
+++||.++|.|-|.-+|+-++..|.++|++|.++......
T Consensus 164 ~l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T~n 203 (299)
T PLN02516 164 PIKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRTPD 203 (299)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCC
Confidence 7899999999999999999999999999999999776543
|
|
| >cd08230 glucose_DH Glucose dehydrogenase | Back alignment and domain information |
|---|
Probab=94.45 E-value=0.22 Score=44.69 Aligned_cols=74 Identities=23% Similarity=0.395 Sum_probs=48.4
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCC---hhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR---KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~---~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
..|++++|+|+ |++|...+..+...|++|++++++ .++.+ .+.+.+.+ .+ |..++ ++.. . ..
T Consensus 171 ~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~----~~~~~Ga~--~v--~~~~~-~~~~-~----~~ 235 (355)
T cd08230 171 WNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKAD----IVEELGAT--YV--NSSKT-PVAE-V----KL 235 (355)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHH----HHHHcCCE--Ee--cCCcc-chhh-h----hh
Confidence 36889999985 999999998888899999999884 33222 23334443 22 33332 2222 1 11
Q ss_pred hCCccEEEECCC
Q 022386 87 FGKLDILVNAAA 98 (298)
Q Consensus 87 ~~~id~li~~ag 98 (298)
.+.+|++|.++|
T Consensus 236 ~~~~d~vid~~g 247 (355)
T cd08230 236 VGEFDLIIEATG 247 (355)
T ss_pred cCCCCEEEECcC
Confidence 257999999987
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai |
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=94.43 E-value=0.37 Score=42.54 Aligned_cols=117 Identities=19% Similarity=0.149 Sum_probs=68.4
Q ss_pred EEEEecCCchhHHHHHHHHHHcCC--cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
.+.|+|++|.+|.++|..|+.+|. .+++++.+ ..+...-++.+.........+. ..++ +.+.+...|
T Consensus 2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~--~~~~-------~y~~~~daD 70 (310)
T cd01337 2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYL--GPEE-------LKKALKGAD 70 (310)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEec--CCCc-------hHHhcCCCC
Confidence 688999999999999999998885 68999987 3333333344322111111110 0001 122345899
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccc
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~ 158 (298)
++|..||... ++ ..+. .+.++.|..-... +.+.+.+... .+.+++++...
T Consensus 71 ivvitaG~~~-k~--g~tR---~dll~~N~~i~~~----i~~~i~~~~p-------~a~vivvtNPv 120 (310)
T cd01337 71 VVVIPAGVPR-KP--GMTR---DDLFNINAGIVRD----LATAVAKACP-------KALILIISNPV 120 (310)
T ss_pred EEEEeCCCCC-CC--CCCH---HHHHHHHHHHHHH----HHHHHHHhCC-------CeEEEEccCch
Confidence 9999999632 21 2343 3345566554444 4444444321 57788888876
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PLN02178 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=94.42 E-value=0.28 Score=44.58 Aligned_cols=74 Identities=18% Similarity=0.282 Sum_probs=48.5
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|++++|.|+ +++|..++......|++|++++++.++..+.. ++.+.+.. .|..+.+.+.+ ..+.+
T Consensus 178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a---~~lGa~~~---i~~~~~~~v~~-------~~~~~ 243 (375)
T PLN02178 178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAI---DRLGADSF---LVTTDSQKMKE-------AVGTM 243 (375)
T ss_pred CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHH---HhCCCcEE---EcCcCHHHHHH-------hhCCC
Confidence 5889999986 89999999988889999988887755432222 33343221 23333322221 12469
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|+++.+.|
T Consensus 244 D~vid~~G 251 (375)
T PLN02178 244 DFIIDTVS 251 (375)
T ss_pred cEEEECCC
Confidence 99999887
|
|
| >PLN02306 hydroxypyruvate reductase | Back alignment and domain information |
|---|
Probab=94.40 E-value=0.2 Score=45.69 Aligned_cols=40 Identities=18% Similarity=0.266 Sum_probs=34.2
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHH-HcCCcEEEEcCChh
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLG-KHGAAIAIMGRRKT 47 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~-~~G~~Vv~~~r~~~ 47 (298)
...|.||++.|.| .|.||+++|+.|. ..|.+|+..++...
T Consensus 160 g~~L~gktvGIiG-~G~IG~~vA~~l~~~fGm~V~~~d~~~~ 200 (386)
T PLN02306 160 GNLLKGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQS 200 (386)
T ss_pred CcCCCCCEEEEEC-CCHHHHHHHHHHHhcCCCEEEEECCCCc
Confidence 3579999999997 5789999999996 78999999988753
|
|
| >PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.38 E-value=0.097 Score=45.53 Aligned_cols=40 Identities=15% Similarity=0.162 Sum_probs=36.7
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV 48 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~ 48 (298)
+++||.++|.|-|.-+|+-++..|.++|++|.++.+....
T Consensus 157 ~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~ 196 (294)
T PRK14187 157 NLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRD 196 (294)
T ss_pred CCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCC
Confidence 7999999999999999999999999999999998876543
|
|
| >cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1 | Back alignment and domain information |
|---|
Probab=94.37 E-value=0.17 Score=42.54 Aligned_cols=36 Identities=19% Similarity=0.211 Sum_probs=31.8
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEE-EEcC
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIA-IMGR 44 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv-~~~r 44 (298)
.+|++++++|.| .|.+|+.+++.|.+.|++|+ +.+.
T Consensus 27 ~~l~~~~v~I~G-~G~VG~~~a~~L~~~g~~vv~v~D~ 63 (227)
T cd01076 27 IGLAGARVAIQG-FGNVGSHAARFLHEAGAKVVAVSDS 63 (227)
T ss_pred CCccCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECC
Confidence 468899999997 79999999999999999998 5555
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids |
| >cd05282 ETR_like 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Probab=94.36 E-value=0.22 Score=43.75 Aligned_cols=79 Identities=16% Similarity=0.130 Sum_probs=51.4
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|.+++|.|+++++|.+++..+...|+.|+++.++.++.+.+ .+.+.+. + .|..+.+..+++ .+... ...+
T Consensus 138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~-~--~~~~~~~~~~~~-~~~~~-~~~~ 208 (323)
T cd05282 138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL----KALGADE-V--IDSSPEDLAQRV-KEATG-GAGA 208 (323)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH----HhcCCCE-E--ecccchhHHHHH-HHHhc-CCCc
Confidence 478999999999999999999999999999888876554333 2233321 1 233332222222 22211 1369
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|.++.+.|
T Consensus 209 d~vl~~~g 216 (323)
T cd05282 209 RLALDAVG 216 (323)
T ss_pred eEEEECCC
Confidence 99998887
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman |
| >PTZ00354 alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.36 E-value=0.26 Score=43.42 Aligned_cols=80 Identities=19% Similarity=0.231 Sum_probs=50.8
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|.+++|.|+++++|.+++..+...|+.++++.++.++.+.+ .+.+.+. ++ |..+.+...+.+..... -..+
T Consensus 140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~-~~--~~~~~~~~~~~~~~~~~-~~~~ 211 (334)
T PTZ00354 140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC----KKLAAII-LI--RYPDEEGFAPKVKKLTG-EKGV 211 (334)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCCcE-EE--ecCChhHHHHHHHHHhC-CCCc
Confidence 478999999999999999999999999988887776544433 2334322 12 22222212222222221 1368
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|.++++.|
T Consensus 212 d~~i~~~~ 219 (334)
T PTZ00354 212 NLVLDCVG 219 (334)
T ss_pred eEEEECCc
Confidence 99998875
|
|
| >TIGR00537 hemK_rel_arch HemK-related putative methylase | Back alignment and domain information |
|---|
Probab=94.36 E-value=1.9 Score=34.64 Aligned_cols=76 Identities=18% Similarity=0.203 Sum_probs=56.5
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
..++++++=.|+..|. ++..+++.|.+|+.++.+.+..+.....+...+.++.++.+|+.+.. .+
T Consensus 17 ~~~~~~vLdlG~G~G~---~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~------------~~ 81 (179)
T TIGR00537 17 ELKPDDVLEIGAGTGL---VAIRLKGKGKCILTTDINPFAVKELRENAKLNNVGLDVVMTDLFKGV------------RG 81 (179)
T ss_pred hcCCCeEEEeCCChhH---HHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCceEEEEccccccc------------CC
Confidence 4567788888887774 45566677778999999988777777777666667888888876421 14
Q ss_pred CccEEEECCCC
Q 022386 89 KLDILVNAAAG 99 (298)
Q Consensus 89 ~id~li~~ag~ 99 (298)
..|.++.|...
T Consensus 82 ~fD~Vi~n~p~ 92 (179)
T TIGR00537 82 KFDVILFNPPY 92 (179)
T ss_pred cccEEEECCCC
Confidence 78999999764
|
The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes. |
| >PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.35 E-value=0.1 Score=45.12 Aligned_cols=39 Identities=23% Similarity=0.348 Sum_probs=36.2
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~ 47 (298)
++.||.++|.|-|.-+|+-++..|.++|++|.++.+...
T Consensus 154 ~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~ 192 (282)
T PRK14166 154 DLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTK 192 (282)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCC
Confidence 789999999999999999999999999999999887654
|
|
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.34 E-value=0.18 Score=45.81 Aligned_cols=39 Identities=18% Similarity=0.283 Sum_probs=34.9
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
..+|.||++.|.|. |.||+++|+.|...|.+|+..+|..
T Consensus 187 ~~~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~ 225 (385)
T PRK07574 187 SYDLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHR 225 (385)
T ss_pred ceecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCC
Confidence 35799999999987 6799999999999999999999874
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 298 | ||||
| 4fc6_A | 277 | Studies On Dcr Shed New Light On Peroxisomal Beta-O | 2e-42 | ||
| 3imf_A | 257 | 1.99 Angstrom Resolution Crystal Structure Of A Sho | 1e-34 | ||
| 1vl8_A | 267 | Crystal Structure Of Gluconate 5-dehydrogenase (tm0 | 1e-28 | ||
| 1yxm_A | 303 | Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa | 2e-27 | ||
| 1rwb_A | 261 | Cooperative Effect Of Two Surface Amino Acid Mutati | 2e-26 | ||
| 1gee_A | 261 | Crystal Structure Of Glucose Dehydrogenase Mutant Q | 4e-26 | ||
| 1gco_A | 261 | Crystal Structure Of Glucose Dehydrogenase Complexe | 4e-26 | ||
| 1g6k_A | 261 | Crystal Structure Of Glucose Dehydrogenase Mutant E | 7e-26 | ||
| 3ay6_A | 269 | Crystal Structure Of Bacillus Megaterium Glucose De | 9e-26 | ||
| 3ay7_A | 269 | Crystal Structure Of Bacillus Megaterium Glucose De | 1e-25 | ||
| 3aus_A | 269 | Crystal Structure Of Bacillus Megaterium Glucose De | 1e-25 | ||
| 2uvd_A | 246 | The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier | 5e-24 | ||
| 1w6u_A | 302 | Structure Of Human Decr Ternary Complex Length = 30 | 2e-21 | ||
| 3cxr_A | 291 | Crystal Structure Of Gluconate 5-Dehydrogase From S | 5e-21 | ||
| 1doh_A | 283 | Structure Of Trihydroxynaphthalene Reductase In Com | 1e-20 | ||
| 1w73_A | 302 | Binary Structure Of Human Decr Solved By Semet Sad. | 1e-20 | ||
| 1ybv_A | 283 | Structure Of Trihydroxynaphthalene Reductase In Com | 1e-20 | ||
| 1ipe_A | 259 | Tropinone Reductase-Ii Complexed With Nadph Length | 4e-20 | ||
| 2ae2_A | 260 | Tropinone Reductase-Ii Complexed With Nadp+ And Pse | 5e-20 | ||
| 3is3_A | 270 | Crystal Structure Of 17beta-Hydroxysteroid Dehydrog | 3e-19 | ||
| 3itd_A | 270 | Crystal Structure Of An Inactive 17beta-Hydroxyster | 5e-19 | ||
| 3ijr_A | 291 | 2.05 Angstrom Resolution Crystal Structure Of A Sho | 6e-19 | ||
| 3i3o_A | 291 | 2.06 Angstrom Resolution Crystal Structure Of A Sho | 7e-19 | ||
| 2c07_A | 285 | Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng | 7e-19 | ||
| 3gaf_A | 256 | 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De | 2e-18 | ||
| 1ahi_A | 255 | 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With | 2e-18 | ||
| 4fgs_A | 273 | Crystal Structure Of A Probable Dehydrogenase Prote | 2e-18 | ||
| 3v8b_A | 283 | Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro | 7e-18 | ||
| 4dqx_A | 277 | Crystal Structure Of A Short Chain Dehydrogenase Fr | 8e-18 | ||
| 3o4r_A | 261 | Crystal Structure Of Human DehydrogenaseREDUCTASE ( | 2e-17 | ||
| 2ew8_A | 249 | Crystal Structure Of The (s)-specific 1-phenylethan | 4e-17 | ||
| 4fn4_A | 254 | Short-chain Nad(h)-dependent Dehydrogenase/reductas | 4e-17 | ||
| 2hq1_A | 247 | Crystal Structure Of Orf 1438 A Putative GlucoseRIB | 6e-17 | ||
| 1iy8_A | 267 | Crystal Structure Of Levodione Reductase Length = 2 | 2e-16 | ||
| 4afn_A | 269 | Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote | 2e-16 | ||
| 3n74_A | 261 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 3e-16 | ||
| 3sj7_A | 252 | Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F | 3e-16 | ||
| 3ftp_A | 270 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 6e-16 | ||
| 1spx_A | 278 | Crystal Structure Of Glucose Dehydrogenase Of Caeno | 7e-16 | ||
| 1yde_A | 270 | Crystal Structure Of Human Retinal Short-Chain Dehy | 9e-16 | ||
| 3tzq_B | 271 | Crystal Structure Of A Short-Chain Type Dehydrogena | 1e-15 | ||
| 3ak4_A | 263 | Crystal Structure Of Nadh-Dependent Quinuclidinone | 1e-15 | ||
| 3osu_A | 246 | Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro | 1e-15 | ||
| 2pnf_A | 248 | Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl- | 1e-15 | ||
| 4g81_D | 255 | Crystal Structure Of A Hexonate Dehydrogenase Ortho | 3e-15 | ||
| 1uls_A | 245 | Crystal Structure Of Tt0140 From Thermus Thermophil | 6e-15 | ||
| 3uf0_A | 273 | Crystal Structure Of A Putative Nad(P) Dependent Gl | 8e-15 | ||
| 3gdf_A | 267 | Crystal Structure Of The Nadp-Dependent Mannitol De | 1e-14 | ||
| 2d1y_A | 256 | Crystal Structure Of Tt0321 From Thermus Thermophil | 1e-14 | ||
| 3pk0_A | 262 | Crystal Structure Of Short-Chain DehydrogenaseREDUC | 1e-14 | ||
| 3qiv_A | 253 | Crystal Structure Of A Putative Short-Chain Dehydro | 2e-14 | ||
| 1xq1_A | 266 | X-Ray Structure Of Putative Tropinone Reducatse Fro | 2e-14 | ||
| 3v2g_A | 271 | Crystal Structure Of A DehydrogenaseREDUCTASE FROM | 2e-14 | ||
| 2zat_A | 260 | Crystal Structure Of A Mammalian Reductase Length = | 2e-14 | ||
| 3icc_A | 255 | Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car | 3e-14 | ||
| 1nxq_A | 251 | Crystal Structure Of R-Alcohol Dehydrogenase (Radh) | 5e-14 | ||
| 1geg_A | 256 | Cryatal Structure Analysis Of Meso-2,3-Butanediol D | 9e-14 | ||
| 4ibo_A | 271 | Crystal Structure Of A Putative Gluconate Dehydroge | 1e-13 | ||
| 3r1i_A | 276 | Crystal Structure Of A Short-Chain Type Dehydrogena | 1e-13 | ||
| 1ae1_A | 273 | Tropinone Reductase-I Complex With Nadp Length = 27 | 1e-13 | ||
| 2ph3_A | 245 | Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei | 1e-13 | ||
| 1zem_A | 262 | Crystal Structure Of Nad+-Bound Xylitol Dehydrogena | 2e-13 | ||
| 3o38_A | 266 | Crystal Structure Of A Short Chain Dehydrogenase Fr | 3e-13 | ||
| 1zjy_A | 251 | Structure Of R-Specific Alcohol Dehydrogenase (Muta | 3e-13 | ||
| 3r3s_A | 294 | Structure Of The Ygha Oxidoreductase From Salmonell | 4e-13 | ||
| 3oic_A | 258 | Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl | 5e-13 | ||
| 1ja9_A | 274 | Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen | 5e-13 | ||
| 1xkq_A | 280 | Crystal Structure Of Short-Chain DehydrogenaseREDUC | 6e-13 | ||
| 2bgk_A | 278 | X-Ray Structure Of Apo-Secoisolariciresinol Dehydro | 7e-13 | ||
| 3f9i_A | 249 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 7e-13 | ||
| 4b79_A | 242 | The Aeropath Project And Pseudomonas Aeruginosa Hig | 8e-13 | ||
| 3rih_A | 293 | Crystal Structure Of A Putative Short Chain Dehydro | 8e-13 | ||
| 1xhl_A | 297 | Crystal Structure Of Putative Tropinone Reductase-I | 1e-12 | ||
| 1hxh_A | 253 | Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D | 1e-12 | ||
| 4iin_A | 271 | Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car | 1e-12 | ||
| 1k2w_A | 256 | Crystal Structure Of Sorbitol Dehydrogenase From R. | 1e-12 | ||
| 4e3z_A | 272 | Crystal Structure Of A Oxidoreductase From Rhizobiu | 1e-12 | ||
| 3tzk_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 2e-12 | ||
| 3ctm_A | 279 | Crystal Structure Of A Carbonyl Reductase From Cand | 2e-12 | ||
| 1x1e_A | 239 | Crystal Structure Of Tt0495 Protein From Thermus Th | 2e-12 | ||
| 4e6p_A | 259 | Crystal Structure Of A Probable Sorbitol Dehydrogen | 2e-12 | ||
| 3tox_A | 280 | Crystal Structure Of A Short Chain Dehydrogenase In | 2e-12 | ||
| 3tzh_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 3e-12 | ||
| 3u5t_A | 267 | The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr | 3e-12 | ||
| 2cfc_A | 250 | Structural Basis For Stereo Selectivity In The (R)- | 4e-12 | ||
| 3tzc_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 4e-12 | ||
| 2rh4_A | 277 | Actinorhodin Ketoreductase, Actkr, With Nadph And I | 5e-12 | ||
| 1w4z_A | 281 | Structure Of Actinorhodin Polyketide (Actiii) Reduc | 5e-12 | ||
| 4dc1_A | 281 | Crystal Structure Of Y202f Actinorhodin Polyketide | 5e-12 | ||
| 3rsh_A | 251 | Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc | 5e-12 | ||
| 2ztm_A | 260 | T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L | 6e-12 | ||
| 1x7g_A | 261 | Actinorhodin Polyketide Ketoreductase, Act Kr, With | 6e-12 | ||
| 4dc0_A | 281 | Crystal Structure Of F189w Actinorhodin Polyketide | 6e-12 | ||
| 4dbz_A | 281 | Crystal Structure Of V151l Actinorhodin Polyketide | 7e-12 | ||
| 4iqg_C | 271 | Crystal Structure Of Bpro0239 Oxidoreductase From P | 7e-12 | ||
| 3u09_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 7e-12 | ||
| 1wmb_A | 260 | Crystal Structure Of Nad Dependent D-3-Hydroxybutyl | 8e-12 | ||
| 2rhr_B | 277 | P94l Actinorhodin Ketordeuctase Mutant, With Nadph | 8e-12 | ||
| 3csd_B | 281 | Actinorhodin Polyketide Ketoreductase Mutant P94l B | 9e-12 | ||
| 2ztu_A | 260 | T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C | 9e-12 | ||
| 2b4q_A | 276 | Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex | 1e-11 | ||
| 2pd6_A | 264 | Structure Of Human Hydroxysteroid Dehydrogenase Typ | 3e-11 | ||
| 3awd_A | 260 | Crystal Structure Of Gox2181 Length = 260 | 3e-11 | ||
| 3nug_A | 247 | Crystal Structure Of Wild Type Tetrameric Pyridoxal | 4e-11 | ||
| 2yz7_A | 260 | X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F | 4e-11 | ||
| 2hsd_A | 253 | The Refined Three-Dimensional Structure Of 3alpha,2 | 5e-11 | ||
| 1q7c_A | 244 | The Structure Of Betaketoacyl-[acp] Reductase Y151f | 5e-11 | ||
| 1i01_A | 244 | Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr | 6e-11 | ||
| 3lyl_A | 247 | Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas | 7e-11 | ||
| 3tsc_A | 277 | Crystal Structure Of Short Chain Dehydrogenase Map_ | 1e-10 | ||
| 4dml_A | 269 | 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn | 2e-10 | ||
| 3ndr_A | 247 | Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro | 2e-10 | ||
| 2wdz_A | 254 | Crystal Structure Of The Short Chain Dehydrogenase | 2e-10 | ||
| 1nff_A | 260 | Crystal Structure Of Rv2002 Gene Product From Mycob | 2e-10 | ||
| 1edo_A | 244 | The X-Ray Structure Of Beta-Keto Acyl Carrier Prote | 3e-10 | ||
| 3ai3_A | 263 | The Crystal Structure Of L-Sorbose Reductase From G | 3e-10 | ||
| 3t7c_A | 299 | Crystal Structure Of Carveol Dehydrogenase From Myc | 3e-10 | ||
| 3op4_A | 248 | Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr | 3e-10 | ||
| 3enn_A | 249 | 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN | 4e-10 | ||
| 1h5q_A | 265 | Mannitol Dehydrogenase From Agaricus Bisporus Lengt | 5e-10 | ||
| 3svt_A | 281 | Structure Of A Short-Chain Type DehydrogenaseREDUCT | 5e-10 | ||
| 3emk_A | 246 | 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN | 5e-10 | ||
| 3ai1_A | 263 | The Crystal Structure Of L-Sorbose Reductase From G | 6e-10 | ||
| 4hp8_A | 247 | Crystal Structure Of A Putative 2-Deoxy-D-Gluconate | 6e-10 | ||
| 1pr9_A | 244 | Human L-Xylulose Reductase Holoenzyme Length = 244 | 7e-10 | ||
| 3d3w_A | 244 | Structure Of L-Xylulose Reductase With Bound Coenzy | 7e-10 | ||
| 2y93_A | 281 | Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2 | 7e-10 | ||
| 2cf2_E | 226 | Architecture Of Mammalian Fatty Acid Synthase Lengt | 8e-10 | ||
| 3oec_A | 317 | Crystal Structure Of Carveol Dehydrogenase From Myc | 8e-10 | ||
| 3un1_A | 260 | Crystal Structure Of An Oxidoreductase From Sinorhi | 1e-09 | ||
| 3d3w_B | 245 | Structure Of L-Xylulose Reductase With Bound Coenzy | 1e-09 | ||
| 3uve_A | 286 | Crystal Structure Of Carveol Dehydrogenase ((+)-Tra | 1e-09 | ||
| 1hdc_A | 254 | Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste | 1e-09 | ||
| 1uzl_A | 247 | Maba From Mycobacterium Tuberculosis Length = 247 | 1e-09 | ||
| 3vtz_A | 269 | Structure Of Thermoplasma Volcanium Aldohexose Dehy | 2e-09 | ||
| 4dyv_A | 272 | Crystal Structure Of A Short-Chain DehydrogenaseRED | 2e-09 | ||
| 1nfr_A | 260 | Rv2002 Gene Product From Mycobacterium Tuberculosis | 2e-09 | ||
| 3e03_A | 274 | Crystal Structure Of A Putative Dehydrogenase From | 2e-09 | ||
| 3kvo_A | 346 | Crystal Structure Of The Catalytic Domain Of Human | 3e-09 | ||
| 2ntn_A | 267 | Crystal Structure Of Maba-c60v/g139a/s144l Length = | 4e-09 | ||
| 2ag5_A | 246 | Crystal Structure Of Human Dhrs6 Length = 246 | 4e-09 | ||
| 3pxx_A | 287 | Crystal Structure Of Carveol Dehydrogenase From Myc | 5e-09 | ||
| 2dtd_A | 264 | Structure Of Thermoplasma Acidophilum Aldohexose De | 5e-09 | ||
| 1uzm_A | 247 | Maba From Mycobacterium Tuberculosis Length = 247 | 6e-09 | ||
| 3v2h_A | 281 | The Crystal Structure Of D-Beta-Hydroxybutyrate Deh | 8e-09 | ||
| 3g1t_A | 258 | Crystal Structure Of Short Chain Dehydrogenase From | 2e-08 | ||
| 2z1n_A | 260 | Crystal Structure Of Ape0912 From Aeropyrum Pernix | 3e-08 | ||
| 2zk7_A | 257 | Structure Of A C-Terminal Deletion Mutant Of Thermo | 3e-08 | ||
| 3grp_A | 266 | 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl- | 4e-08 | ||
| 2et6_A | 604 | (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid | 4e-08 | ||
| 3gk3_A | 269 | Crystal Structure Of Acetoacetyl-Coa Reductase From | 6e-08 | ||
| 2ptg_A | 319 | Crystal Structure Of Eimeria Tenella Enoyl Reductas | 6e-08 | ||
| 3uwr_A | 286 | Crystal Structure Of Carveol Dehydrogenase From Myc | 6e-08 | ||
| 3tjr_A | 301 | Crystal Structure Of A Rv0851c Ortholog Short Chain | 7e-08 | ||
| 2ehd_A | 234 | Crystal Structure Analysis Of Oxidoreductase Length | 1e-07 | ||
| 2gdz_A | 267 | Crystal Structure Of 15-Hydroxyprostaglandin Dehydr | 1e-07 | ||
| 2nm0_A | 253 | Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl | 1e-07 | ||
| 3afm_A | 258 | Crystal Structure Of Aldose Reductase A1-R Responsi | 2e-07 | ||
| 3edm_A | 259 | Crystal Structure Of A Short Chain Dehydrogenase Fr | 2e-07 | ||
| 2o2s_A | 315 | The Structure Of T. Gondii Enoyl Acyl Carrier Prote | 2e-07 | ||
| 2jap_A | 247 | Clavulanic Acid Dehydrogenase: Structural And Bioch | 2e-07 | ||
| 1cyd_A | 244 | Carbonyl Reductase Complexed With Nadph And 2-Propa | 2e-07 | ||
| 3i4f_A | 264 | Structure Of Putative 3-oxoacyl-reductase From Baci | 2e-07 | ||
| 2a4k_A | 263 | 3-Oxoacyl-[acyl Carrier Protein] Reductase From The | 3e-07 | ||
| 2o50_A | 315 | The Crystal Structure Of Toxoplasma Gondii Enoyl Ac | 3e-07 | ||
| 2q2q_A | 255 | Structure Of D-3-Hydroxybutyrate Dehydrogenase From | 4e-07 | ||
| 3iah_A | 256 | Crystal Structure Of Short Chain Dehydrogenase (yci | 4e-07 | ||
| 4egf_A | 266 | Crystal Structure Of A L-Xylulose Reductase From My | 6e-07 | ||
| 2xox_A | 288 | Crystal Structure Of Pteridine Reductase (Ptr1) Fro | 7e-07 | ||
| 2qq5_A | 260 | Crystal Structure Of Human Sdr Family Member 1 Leng | 8e-07 | ||
| 3sc4_A | 285 | Crystal Structure Of A Short Chain Dehydrogenase (A | 8e-07 | ||
| 3f4b_A | 323 | Crystal Structure Of Plasmodium Berghei Enoyl-Acyl- | 9e-07 | ||
| 3f5s_A | 255 | Crystal Structure Of Putatitve Short Chain Dehydrog | 9e-07 | ||
| 1mxf_A | 276 | Crystal Structure Of Inhibitor Complex Of Putative | 1e-06 | ||
| 3lf1_A | 265 | Apo Structure Of The Short Chain Oxidoreductase Q9h | 1e-06 | ||
| 1mxh_A | 276 | Crystal Structure Of Substrate Complex Of Putative | 2e-06 | ||
| 4eso_A | 255 | Crystal Structure Of A Putative Oxidoreductase Prot | 2e-06 | ||
| 3vc7_A | 254 | Crystal Structure Of A Putative Oxidoreductase From | 2e-06 | ||
| 3pgx_A | 280 | Crystal Structure Of A Putative Carveol Dehydrogena | 2e-06 | ||
| 3ioy_A | 319 | Structure Of Putative Short-Chain Dehydrogenase (Sa | 2e-06 | ||
| 3f5q_A | 262 | Crystal Structure Of Putative Short Chain Dehydroge | 2e-06 | ||
| 1p33_A | 289 | Pteridine Reductase From Leishmania Tarentolae Comp | 2e-06 | ||
| 1w0c_A | 307 | Inhibition Of Leishmania Major Pteridine Reductase | 2e-06 | ||
| 2qhx_A | 328 | Structure Of Pteridine Reductase From Leishmania Ma | 3e-06 | ||
| 2pd3_A | 275 | Crystal Structure Of The Helicobacter Pylori Enoyl- | 3e-06 | ||
| 1e92_A | 288 | Pteridine Reductase 1 From Leishmania Major Complex | 3e-06 | ||
| 2jah_A | 247 | Biochemical And Structural Analysis Of The Clavulan | 3e-06 | ||
| 1e7w_A | 291 | One Active Site, Two Modes Of Reduction Correlate T | 3e-06 | ||
| 1o5i_A | 249 | Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei | 3e-06 | ||
| 3qlj_A | 322 | Crystal Structure Of A Short Chain Dehydrogenase Fr | 4e-06 | ||
| 1xse_A | 295 | Crystal Structure Of Guinea Pig 11beta-Hydroxystero | 4e-06 | ||
| 3f1l_A | 252 | The 0.95 A Structure Of An Oxidoreductase, Ycik Fro | 5e-06 | ||
| 3o26_A | 311 | The Structure Of Salutaridine Reductase From Papave | 7e-06 | ||
| 3g49_A | 277 | N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b- | 8e-06 | ||
| 3dwf_A | 276 | Crystal Structure Of The Guinea Pig 11beta-Hydroxys | 8e-06 | ||
| 3lz6_A | 263 | Guinea Pig 11beta Hydroxysteroid Dehydrogenase With | 1e-05 | ||
| 1bdb_A | 277 | Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From | 1e-05 | ||
| 3sx2_A | 278 | Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Ca | 1e-05 | ||
| 3tfo_A | 264 | Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car | 1e-05 | ||
| 2fwm_X | 250 | Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodih | 1e-05 | ||
| 4imr_A | 275 | Crystal Structure Of 3-oxoacyl (acyl-carrier-protei | 1e-05 | ||
| 3s55_A | 281 | Crystal Structure Of A Putative Short-Chain Dehydro | 2e-05 | ||
| 3bmc_B | 288 | Structure Of Pteridine Reductase 1 (Ptr1) From Tryp | 3e-05 | ||
| 3sju_A | 279 | Hedamycin Polyketide Ketoreductase Bound To Nadph L | 3e-05 | ||
| 3a28_C | 258 | Crystal Structure Of L-2,3-Butanediol Dehydrogenase | 3e-05 | ||
| 3bmc_A | 288 | Structure Of Pteridine Reductase 1 (Ptr1) From Tryp | 4e-05 | ||
| 3jq7_B | 288 | Crystal Structure Of Pteridine Reductase 1 (Ptr1) F | 4e-05 | ||
| 3ged_A | 247 | Fingerprint And Structural Analysis Of A Apo Scor E | 4e-05 | ||
| 1zbq_A | 327 | Crystal Structure Of Human 17-beta-hydroxysteroid D | 4e-05 | ||
| 4ali_A | 282 | Crystal Structure Of S. Aureus Fabi In Complex With | 5e-05 | ||
| 3jq7_A | 288 | Crystal Structure Of Pteridine Reductase 1 (Ptr1) F | 5e-05 | ||
| 4fs3_A | 256 | Crystal Structure Of Staphylococcus Aureus Enoyl-Ac | 5e-05 | ||
| 3gnt_A | 256 | Crystal Structure Of The Staphylococcus Aureus Enoy | 6e-05 | ||
| 4all_A | 277 | Crystal Structure Of S. Aureus Fabi In Complex With | 6e-05 | ||
| 3tl3_A | 257 | Structure Of A Short-Chain Type DehydrogenaseREDUCT | 6e-05 | ||
| 3gns_A | 260 | Crystal Structure Of The Staphylococcus Aureus Enoy | 7e-05 | ||
| 3gvc_A | 277 | Crystal Structure Of Probable Short-Chain Dehydroge | 8e-05 | ||
| 3oml_A | 613 | Structure Of Full-Length Peroxisomal Multifunctiona | 8e-05 | ||
| 2wd7_A | 268 | Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce | 8e-05 | ||
| 4bb6_A | 292 | Free-Wilson And Structural Approaches To Co-Optimis | 9e-05 | ||
| 3e9q_A | 273 | Crystal Structure Of The Short Chain Dehydrogenase | 9e-05 | ||
| 2wd7_B | 268 | Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce | 1e-04 | ||
| 3d5q_A | 272 | Crystal Structure Of 11b-Hsd1 In Complex With Triaz | 1e-04 | ||
| 3pdj_A | 273 | Crystal Structure Of Human 11-Beta-Hydroxysteroid D | 1e-04 | ||
| 4hfr_A | 272 | Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In | 1e-04 | ||
| 3am3_A | 329 | A372m Mutant Of Enoyl-Acp Reductase From Plasmodium | 1e-04 | ||
| 2o2y_A | 349 | The Crystal Structure Of P. Falciparum Enoyl Acyl C | 1e-04 | ||
| 1xu7_A | 286 | Crystal Structure Of The Interface Open Conformatio | 1e-04 | ||
| 4bb5_A | 292 | Free-Wilson And Structural Approaches To Co-Optimis | 1e-04 | ||
| 1vrw_A | 336 | Crystal Structure Analysis Of Plasmodium Falciparum | 1e-04 | ||
| 3i1j_A | 247 | Structure Of A Putative Short Chain Dehydrogenase F | 1e-04 | ||
| 4iiu_A | 267 | Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car | 1e-04 | ||
| 2ilt_A | 275 | Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W | 1e-04 | ||
| 2irw_A | 264 | Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W | 2e-04 | ||
| 2c7v_A | 268 | Structure Of Trypanosoma Brucei Pteridine Reductase | 2e-04 | ||
| 2rbe_A | 275 | The Discovery Of 2-Anilinothiazolones As 11beta-Hsd | 2e-04 | ||
| 3t4x_A | 267 | Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU | 2e-04 | ||
| 2p91_A | 285 | Crystal Structure Of Enoyl-[acyl-Carrier-Protein] R | 2e-04 | ||
| 3ch6_A | 286 | Crystal Structure Of 11beta-Hsd1 Double Mutant (L26 | 2e-04 | ||
| 2ol4_A | 338 | Crystal Structure Of Plasmodium Falciparum Enoyl Ac | 2e-04 | ||
| 2bel_A | 283 | Structure Of Human 11-Beta-Hydroxysteroid Dehydroge | 2e-04 | ||
| 3ezl_A | 256 | Crystal Structure Of Acetyacetyl-Coa Reductase From | 2e-04 | ||
| 2foi_A | 269 | Synthesis, Biological Activity, And X-Ray Crystal S | 3e-04 | ||
| 1uh5_A | 329 | Crystal Structure Of Enoyl-Acp Reductase With Tricl | 3e-04 | ||
| 3gmd_A | 264 | Structure-Based Design Of 7-Azaindole-Pyrrolidines | 3e-04 | ||
| 1y5m_A | 276 | The Crystal Structure Of Murine 11b-Hydroxysteroid | 3e-04 | ||
| 1nhg_A | 229 | Crystal Structure Analysis Of Plasmodium Falciparum | 3e-04 | ||
| 4da9_A | 280 | Crystal Structure Of Putative Short-Chain Dehydroge | 4e-04 | ||
| 3f1k_A | 252 | Crystal Structure Of Ycik From E. Coli, An Oxidored | 5e-04 | ||
| 3u9l_A | 324 | The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr | 5e-04 | ||
| 3u0b_A | 454 | Crystal Structure Of An Oxidoreductase From Mycobac | 5e-04 | ||
| 1iol_A | 327 | Estrogenic 17-beta Hydroxysteroid Dehydrogenase Com | 6e-04 | ||
| 2yw9_A | 261 | Crystal Structure Of Tt0143 From Thermus Thermophil | 7e-04 | ||
| 1n5d_A | 288 | Crystal Structure Of Porcine Testicular Carbonyl Re | 7e-04 | ||
| 4e4y_A | 244 | The Crystal Structure Of A Short Chain Dehydrogenas | 8e-04 |
| >pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277 | Back alignment and structure |
|
| >pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257 | Back alignment and structure |
|
| >pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267 | Back alignment and structure |
|
| >pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303 | Back alignment and structure |
|
| >pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261 | Back alignment and structure |
|
| >pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261 | Back alignment and structure |
|
| >pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261 | Back alignment and structure |
|
| >pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261 | Back alignment and structure |
|
| >pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269 | Back alignment and structure |
|
| >pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269 | Back alignment and structure |
|
| >pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269 | Back alignment and structure |
|
| >pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246 | Back alignment and structure |
|
| >pdb|1W6U|A Chain A, Structure Of Human Decr Ternary Complex Length = 302 | Back alignment and structure |
|
| >pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291 | Back alignment and structure |
|
| >pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283 | Back alignment and structure |
|
| >pdb|1W73|A Chain A, Binary Structure Of Human Decr Solved By Semet Sad. Length = 302 | Back alignment and structure |
|
| >pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259 | Back alignment and structure |
|
| >pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260 | Back alignment and structure |
|
| >pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270 | Back alignment and structure |
|
| >pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270 | Back alignment and structure |
|
| >pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291 | Back alignment and structure |
|
| >pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291 | Back alignment and structure |
|
| >pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285 | Back alignment and structure |
|
| >pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256 | Back alignment and structure |
|
| >pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255 | Back alignment and structure |
|
| >pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273 | Back alignment and structure |
|
| >pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283 | Back alignment and structure |
|
| >pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277 | Back alignment and structure |
|
| >pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261 | Back alignment and structure |
|
| >pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249 | Back alignment and structure |
|
| >pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254 | Back alignment and structure |
|
| >pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247 | Back alignment and structure |
|
| >pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267 | Back alignment and structure |
|
| >pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269 | Back alignment and structure |
|
| >pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261 | Back alignment and structure |
|
| >pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252 | Back alignment and structure |
|
| >pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270 | Back alignment and structure |
|
| >pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278 | Back alignment and structure |
|
| >pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270 | Back alignment and structure |
|
| >pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271 | Back alignment and structure |
|
| >pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263 | Back alignment and structure |
|
| >pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246 | Back alignment and structure |
|
| >pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248 | Back alignment and structure |
|
| >pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255 | Back alignment and structure |
|
| >pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245 | Back alignment and structure |
|
| >pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273 | Back alignment and structure |
|
| >pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol Dehydrogenase From Cladosporium Herbarum. Length = 267 | Back alignment and structure |
|
| >pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256 | Back alignment and structure |
|
| >pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262 | Back alignment and structure |
|
| >pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253 | Back alignment and structure |
|
| >pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266 | Back alignment and structure |
|
| >pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271 | Back alignment and structure |
|
| >pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260 | Back alignment and structure |
|
| >pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255 | Back alignment and structure |
|
| >pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251 | Back alignment and structure |
|
| >pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256 | Back alignment and structure |
|
| >pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271 | Back alignment and structure |
|
| >pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276 | Back alignment and structure |
|
| >pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273 | Back alignment and structure |
|
| >pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245 | Back alignment and structure |
|
| >pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262 | Back alignment and structure |
|
| >pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266 | Back alignment and structure |
|
| >pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251 | Back alignment and structure |
|
| >pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294 | Back alignment and structure |
|
| >pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258 | Back alignment and structure |
|
| >pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274 | Back alignment and structure |
|
| >pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280 | Back alignment and structure |
|
| >pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278 | Back alignment and structure |
|
| >pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249 | Back alignment and structure |
|
| >pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242 | Back alignment and structure |
|
| >pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293 | Back alignment and structure |
|
| >pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297 | Back alignment and structure |
|
| >pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253 | Back alignment and structure |
|
| >pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271 | Back alignment and structure |
|
| >pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256 | Back alignment and structure |
|
| >pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272 | Back alignment and structure |
|
| >pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279 | Back alignment and structure |
|
| >pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239 | Back alignment and structure |
|
| >pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259 | Back alignment and structure |
|
| >pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280 | Back alignment and structure |
|
| >pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267 | Back alignment and structure |
|
| >pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250 | Back alignment and structure |
|
| >pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277 | Back alignment and structure |
|
| >pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281 | Back alignment and structure |
|
| >pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281 | Back alignment and structure |
|
| >pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251 | Back alignment and structure |
|
| >pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260 | Back alignment and structure |
|
| >pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261 | Back alignment and structure |
|
| >pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281 | Back alignment and structure |
|
| >pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281 | Back alignment and structure |
|
| >pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271 | Back alignment and structure |
|
| >pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260 | Back alignment and structure |
|
| >pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277 | Back alignment and structure |
|
| >pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281 | Back alignment and structure |
|
| >pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260 | Back alignment and structure |
|
| >pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276 | Back alignment and structure |
|
| >pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264 | Back alignment and structure |
|
| >pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260 | Back alignment and structure |
|
| >pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247 | Back alignment and structure |
|
| >pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260 | Back alignment and structure |
|
| >pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253 | Back alignment and structure |
|
| >pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244 | Back alignment and structure |
|
| >pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244 | Back alignment and structure |
|
| >pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247 | Back alignment and structure |
|
| >pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277 | Back alignment and structure |
|
| >pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269 | Back alignment and structure |
|
| >pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247 | Back alignment and structure |
|
| >pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254 | Back alignment and structure |
|
| >pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260 | Back alignment and structure |
|
| >pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244 | Back alignment and structure |
|
| >pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263 | Back alignment and structure |
|
| >pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299 | Back alignment and structure |
|
| >pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248 | Back alignment and structure |
|
| >pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249 | Back alignment and structure |
|
| >pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus Length = 265 | Back alignment and structure |
|
| >pdb|3SVT|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 281 | Back alignment and structure |
|
| >pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246 | Back alignment and structure |
|
| >pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263 | Back alignment and structure |
|
| >pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247 | Back alignment and structure |
|
| >pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244 | Back alignment and structure |
|
| >pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244 | Back alignment and structure |
|
| >pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281 | Back alignment and structure |
|
| >pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226 | Back alignment and structure |
|
| >pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317 | Back alignment and structure |
|
| >pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260 | Back alignment and structure |
|
| >pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286 | Back alignment and structure |
|
| >pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254 | Back alignment and structure |
|
| >pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247 | Back alignment and structure |
|
| >pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269 | Back alignment and structure |
|
| >pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SDR FROM Xanthobacter Autotrophicus Py2 Length = 272 | Back alignment and structure |
|
| >pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260 | Back alignment and structure |
|
| >pdb|3E03|A Chain A, Crystal Structure Of A Putative Dehydrogenase From Xanthomonas Campestris Length = 274 | Back alignment and structure |
|
| >pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346 | Back alignment and structure |
|
| >pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267 | Back alignment and structure |
|
| >pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6 Length = 246 | Back alignment and structure |
|
| >pdb|3PXX|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nicotinamide Adenine Dinucleotide Length = 287 | Back alignment and structure |
|
| >pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264 | Back alignment and structure |
|
| >pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247 | Back alignment and structure |
|
| >pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281 | Back alignment and structure |
|
| >pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258 | Back alignment and structure |
|
| >pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1 Length = 260 | Back alignment and structure |
|
| >pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257 | Back alignment and structure |
|
| >pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266 | Back alignment and structure |
|
| >pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604 | Back alignment and structure |
|
| >pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269 | Back alignment and structure |
|
| >pdb|2PTG|A Chain A, Crystal Structure Of Eimeria Tenella Enoyl Reductase Length = 319 | Back alignment and structure |
|
| >pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286 | Back alignment and structure |
|
| >pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301 | Back alignment and structure |
|
| >pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234 | Back alignment and structure |
|
| >pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267 | Back alignment and structure |
|
| >pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253 | Back alignment and structure |
|
| >pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For Alginate Metabolism Length = 258 | Back alignment and structure |
|
| >pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Agrobacterium Tumefaciens Length = 259 | Back alignment and structure |
|
| >pdb|2O2S|A Chain A, The Structure Of T. Gondii Enoyl Acyl Carrier Protein Reductase In Complex With Nad And Triclosan Length = 315 | Back alignment and structure |
|
| >pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247 | Back alignment and structure |
|
| >pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244 | Back alignment and structure |
|
| >pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264 | Back alignment and structure |
|
| >pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263 | Back alignment and structure |
|
| >pdb|2O50|A Chain A, The Crystal Structure Of Toxoplasma Gondii Enoyl Acyl Carrier Protein Reductase Length = 315 | Back alignment and structure |
|
| >pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255 | Back alignment and structure |
|
| >pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 In Complex With Nadp And Acetate. Length = 256 | Back alignment and structure |
|
| >pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From Mycobacterium Smegmatis Length = 266 | Back alignment and structure |
|
| >pdb|2XOX|A Chain A, Crystal Structure Of Pteridine Reductase (Ptr1) From Leishmania Donovani Length = 288 | Back alignment and structure |
|
| >pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260 | Back alignment and structure |
|
| >pdb|3SC4|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase (A0qtm2 Homolog) Mycobacterium Thermoresistibile Length = 285 | Back alignment and structure |
|
| >pdb|3F4B|A Chain A, Crystal Structure Of Plasmodium Berghei Enoyl-Acyl-Carrier- Protein Reductase With Triclosan Length = 323 | Back alignment and structure |
|
| >pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase From Shigella Flexneri 2a Str. 301 Length = 255 | Back alignment and structure |
|
| >pdb|1MXF|A Chain A, Crystal Structure Of Inhibitor Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276 | Back alignment and structure |
|
| >pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265 | Back alignment and structure |
|
| >pdb|1MXH|A Chain A, Crystal Structure Of Substrate Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276 | Back alignment and structure |
|
| >pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255 | Back alignment and structure |
|
| >pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254 | Back alignment and structure |
|
| >pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280 | Back alignment and structure |
|
| >pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319 | Back alignment and structure |
|
| >pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase From Escherichia Coli Cft073 Length = 262 | Back alignment and structure |
|
| >pdb|1P33|A Chain A, Pteridine Reductase From Leishmania Tarentolae Complex With Nadph And Mtx Length = 289 | Back alignment and structure |
|
| >pdb|1W0C|A Chain A, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1) By 2,4,6-Triaminoquinazoline; Structure Of The Nadp Ternary Complex. Length = 307 | Back alignment and structure |
|
| >pdb|2QHX|A Chain A, Structure Of Pteridine Reductase From Leishmania Major Complexed With A Ligand Length = 328 | Back alignment and structure |
|
| >pdb|2PD3|A Chain A, Crystal Structure Of The Helicobacter Pylori Enoyl-Acyl Carrier Protein Reductase In Complex With Hydroxydiphenyl Ether Compounds, Triclosan And Diclosan Length = 275 | Back alignment and structure |
|
| >pdb|1E92|A Chain A, Pteridine Reductase 1 From Leishmania Major Complexed With Nadp+ And Dihydrobiopterin Length = 288 | Back alignment and structure |
|
| >pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247 | Back alignment and structure |
|
| >pdb|1E7W|A Chain A, One Active Site, Two Modes Of Reduction Correlate The Mechanism Of Leishmania Pteridine Reductase With Pterin Metabolism And Antifolate Drug Resistance In Trpanosomes Length = 291 | Back alignment and structure |
|
| >pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Reductase (Tm1169) From Thermotoga Maritima At 2.50 A Resolution Length = 249 | Back alignment and structure |
|
| >pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322 | Back alignment and structure |
|
| >pdb|1XSE|A Chain A, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Length = 295 | Back alignment and structure |
|
| >pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From E.Coli Length = 252 | Back alignment and structure |
|
| >pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver Somniferum Length = 311 | Back alignment and structure |
|
| >pdb|3G49|A Chain A, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of Pf-915275 Length = 277 | Back alignment and structure |
|
| >pdb|3DWF|A Chain A, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Mutant F278e Length = 276 | Back alignment and structure |
|
| >pdb|3LZ6|A Chain A, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With Pf-877423 Length = 263 | Back alignment and structure |
|
| >pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From Pseudomonas Sp. Lb400 Length = 277 | Back alignment and structure |
|
| >pdb|3SX2|A Chain A, Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Paratuberculosis In Complex With Nad Length = 278 | Back alignment and structure |
|
| >pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264 | Back alignment and structure |
|
| >pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy Benzoate Dehydrogenase Length = 250 | Back alignment and structure |
|
| >pdb|4IMR|A Chain A, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein) Reductase (target Efi-506442) From Agrobacterium Tumefaciens C58 With Nadp Bound Length = 275 | Back alignment and structure |
|
| >pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281 | Back alignment and structure |
|
| >pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288 | Back alignment and structure |
|
| >pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279 | Back alignment and structure |
|
| >pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258 | Back alignment and structure |
|
| >pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288 | Back alignment and structure |
|
| >pdb|3JQ7|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288 | Back alignment and structure |
|
| >pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247 | Back alignment and structure |
|
| >pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327 | Back alignment and structure |
|
| >pdb|4ALI|A Chain A, Crystal Structure Of S. Aureus Fabi In Complex With Nadp And Triclosan (P1) Length = 282 | Back alignment and structure |
|
| >pdb|3JQ7|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288 | Back alignment and structure |
|
| >pdb|4FS3|A Chain A, Crystal Structure Of Staphylococcus Aureus Enoyl-Acp Reductase In Complex With Nadp And Afn-1252 Length = 256 | Back alignment and structure |
|
| >pdb|3GNT|A Chain A, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl Carrier Protein Reductase (Fabi) In Apo Form (Two Molecules In Au) Length = 256 | Back alignment and structure |
|
| >pdb|4ALL|A Chain A, Crystal Structure Of S. Aureus Fabi In Complex With Nadp And Triclosan (P212121) Length = 277 | Back alignment and structure |
|
| >pdb|3TL3|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 257 | Back alignment and structure |
|
| >pdb|3GNS|A Chain A, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl Carrier Protein Reductase (Fabi) In Apo Form (One Molecule In Au) Length = 260 | Back alignment and structure |
|
| >pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277 | Back alignment and structure |
|
| >pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613 | Back alignment and structure |
|
| >pdb|2WD7|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268 | Back alignment and structure |
|
| >pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292 | Back alignment and structure |
|
| >pdb|3E9Q|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase From Shigella Flexneri Length = 273 | Back alignment and structure |
|
| >pdb|2WD7|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268 | Back alignment and structure |
|
| >pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase 1 (11b-Hsd1) In Complex With 4,4-Disubstituted Cyclohexylbenzamide Inhibitor Length = 273 | Back alignment and structure |
|
| >pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In Complex With An Orally Bioavailable Acidic Inhibitor Azd4017. Length = 272 | Back alignment and structure |
|
| >pdb|3AM3|A Chain A, A372m Mutant Of Enoyl-Acp Reductase From Plasmodium Falciparum (Pfenr) In Complex With Triclosan Length = 329 | Back alignment and structure |
|
| >pdb|2O2Y|A Chain A, The Crystal Structure Of P. Falciparum Enoyl Acyl Carrier Protein Reductase Length = 349 | Back alignment and structure |
|
| >pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of Tetrameric 11b-hsd1 Length = 286 | Back alignment and structure |
|
| >pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292 | Back alignment and structure |
|
| >pdb|1VRW|A Chain A, Crystal Structure Analysis Of Plasmodium Falciparum Enoyl- Acyl-Carrier-Protein Reductase With Nadh Length = 336 | Back alignment and structure |
|
| >pdb|3I1J|A Chain A, Structure Of A Putative Short Chain Dehydrogenase From Pseudomonas Syringae Length = 247 | Back alignment and structure |
|
| >pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2.1 A Resolution Length = 267 | Back alignment and structure |
|
| >pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Sulfone Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Ether Inhibitor Length = 264 | Back alignment and structure |
|
| >pdb|2C7V|A Chain A, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1) In Ternary Complex With Cofactor And The Antifolate Methotrexate Length = 268 | Back alignment and structure |
|
| >pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1 Inhibitors Length = 275 | Back alignment and structure |
|
| >pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267 | Back alignment and structure |
|
| >pdb|2P91|A Chain A, Crystal Structure Of Enoyl-[acyl-Carrier-Protein] Reductase (Nadh) From Aquifex Aeolicus Vf5 Length = 285 | Back alignment and structure |
|
| >pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r, F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3- Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone Length = 286 | Back alignment and structure |
|
| >pdb|2OL4|A Chain A, Crystal Structure Of Plasmodium Falciparum Enoyl Acp Reductase With Triclosan Reductase Length = 338 | Back alignment and structure |
|
| >pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In Complex With Nadp And Carbenoxolone Length = 283 | Back alignment and structure |
|
| >pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256 | Back alignment and structure |
|
| >pdb|2FOI|A Chain A, Synthesis, Biological Activity, And X-Ray Crystal Structural Analysis Of Diaryl Ether Inhibitors Of Malarial Enoyl Acp Reductase. Length = 269 | Back alignment and structure |
|
| >pdb|1UH5|A Chain A, Crystal Structure Of Enoyl-Acp Reductase With Triclosan At 2.2angstroms Length = 329 | Back alignment and structure |
|
| >pdb|3GMD|A Chain A, Structure-Based Design Of 7-Azaindole-Pyrrolidines As Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I Length = 264 | Back alignment and structure |
|
| >pdb|1Y5M|A Chain A, The Crystal Structure Of Murine 11b-Hydroxysteroid Dehydrogenase: An Important Therapeutic Target For Diabetes Length = 276 | Back alignment and structure |
|
| >pdb|1NHG|A Chain A, Crystal Structure Analysis Of Plasmodium Falciparum Enoyl- Acyl-Carrier-Protein Reductase With Triclosan Length = 229 | Back alignment and structure |
|
| >pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280 | Back alignment and structure |
|
| >pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An Oxidoreductase, Complexed With Nadp+ At 2.6a Resolution Length = 252 | Back alignment and structure |
|
| >pdb|3U9L|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase (Nadph) From Sinorhizobium Meliloti Length = 324 | Back alignment and structure |
|
| >pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454 | Back alignment and structure |
|
| >pdb|1IOL|A Chain A, Estrogenic 17-beta Hydroxysteroid Dehydrogenase Complexed 17-beta- Estradiol Length = 327 | Back alignment and structure |
|
| >pdb|2YW9|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8 Length = 261 | Back alignment and structure |
|
| >pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase 20beta-Hydroxysteroid Dehydrogenase Length = 288 | Back alignment and structure |
|
| >pdb|4E4Y|A Chain A, The Crystal Structure Of A Short Chain Dehydrogenase Family Protein From Francisella Tularensis Subsp. Tularensis Schu S4 Length = 244 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302 | Back alignment and structure |
|---|
Score = 315 bits (810), Expect = e-108
Identities = 88/296 (29%), Positives = 147/296 (49%), Gaps = 17/296 (5%)
Query: 2 ESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LG 60
++ + +GKVA +TGGG+G+G ++ L GA I R+ VL++ + S G
Sbjct: 16 KAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG 75
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
++ DVR + V I G +I++N AAGNF+ P E LSPN ++T+ +I
Sbjct: 76 NKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIV 135
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
GT + E K L K + G ++I+ T + + + ++AKA V++++
Sbjct: 136 LNGTAFVTLEIGKQLIKAQK-------GAAFLSITTIYAETGSGFVVPSASAKAGVEAMS 188
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDIAMA 239
+SLA EWG Y +R N I PGPIK S+L P + + + G ++A
Sbjct: 189 KSLAAEWG-KYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANL 247
Query: 240 ALYLASDAGKYVNGNTLIVDGGNWL------SNPRDLPKEAVNQLSRAVERKSRDS 289
A +L SD ++NG + DGG + ++ R + KE + + + RK++ S
Sbjct: 248 AAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTKEQWDTIEELI-RKTKGS 302
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277 | Back alignment and structure |
|---|
Score = 310 bits (796), Expect = e-106
Identities = 108/268 (40%), Positives = 147/268 (54%), Gaps = 11/268 (4%)
Query: 2 ESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-HSLG 60
F D+L+ KVA +TGGGSGIGF I+ +HG I R + +A L + G
Sbjct: 17 RHLFCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATG 76
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
+ L DVR + V+ + FG++DIL+N AAGNFL PA LS N F+TV++ID
Sbjct: 77 RRCLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDID 136
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
+ GTF + + + GG+I+NI+ATL Q+H +AKAAVD++T
Sbjct: 137 TSGTFNVSRVLYEKFFRDH--------GGVIVNITATLGNRGQALQVHAGSAKAAVDAMT 188
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDIAMA 239
R LA+EWG IRVN +APGPI T G+ +L + S + G K +IA +
Sbjct: 189 RHLAVEWGP-QNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHS 247
Query: 240 ALYLASDAGKYVNGNTLIVDGGNWLSNP 267
LYLAS YV G L+ DGG WL+ P
Sbjct: 248 VLYLASPLASYVTGAVLVADGGAWLTFP 275
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257 | Back alignment and structure |
|---|
Score = 305 bits (783), Expect = e-105
Identities = 103/261 (39%), Positives = 144/261 (55%), Gaps = 8/261 (3%)
Query: 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLE 67
+ +K KV ++TGG SG+G ++ + K GA + I GR K L A + + ++
Sbjct: 2 NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQ 61
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
DVR +D +++E FG++DIL+N AAGNF+ PAEDLS NG+ +VI I GTF
Sbjct: 62 MDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYC 121
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
KY + G G IIN+ AT + A IH +AAKA V ++T++LA+EW
Sbjct: 122 SQAIGKYWIEKGI-------KGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEW 174
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
G Y IRVN IAPGPI+ T G KL EE+ + + + G +IA A YL SD
Sbjct: 175 GRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLCSD 234
Query: 247 AGKYVNGNTLIVDGGNWLSNP 267
Y+NG + +DGG L
Sbjct: 235 EAAYINGTCMTMDGGQHLHQY 255
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303 | Back alignment and structure |
|---|
Score = 256 bits (657), Expect = 4e-85
Identities = 84/273 (30%), Positives = 132/273 (48%), Gaps = 17/273 (6%)
Query: 2 ESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL----- 56
S +L+G+VA++TGG +GIG I +L + G+ + I R+ L+SA L
Sbjct: 8 RSYLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLP 67
Query: 57 HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV 116
+ I ++ ++R E+ +V+ST++ FGK++ LVN G FL PAE +S G+ V
Sbjct: 68 PTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAV 127
Query: 117 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 176
+E + GTF MC K GG I+NI +H AA+A V
Sbjct: 128 LETNLTGTFYMCKAVYSSWMKEH--------GGSIVNIIVP-TKAGFPLAVHSGAARAGV 178
Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP--EEIRSKATDYMAAYKFGEKW 234
++T+SLALEW IR+N +APG I V + + + A + G
Sbjct: 179 YNLTKSLALEWAC-SGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPE 237
Query: 235 DIAMAALYLASDAGKYVNGNTLIVDGGNWLSNP 267
+++ +L S A ++ G ++ VDGG L
Sbjct: 238 EVSSVVCFLLSPAASFITGQSVDVDGGRSLYTH 270
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264 | Back alignment and structure |
|---|
Score = 214 bits (548), Expect = 3e-69
Identities = 56/266 (21%), Positives = 115/266 (43%), Gaps = 20/266 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L KV +++G G +G ++ + + GA + + R L + G A+ + D
Sbjct: 9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTD 68
Query: 70 VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
+ +V+ T+ +G++D+++ NA + P + + R IE+ G +
Sbjct: 69 ITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLI 128
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
L++ G ++N+++ + + AK+A+ +++++LA E G
Sbjct: 129 QGFTPALEES---------KGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELG 179
Query: 189 TDYAIRVNGIAPGPIK---------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239
+ IRVN + PG I AG + E+I + A + + ++A A
Sbjct: 180 -EKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASA 238
Query: 240 ALYLASDAGKYVNGNTLIVDGGNWLS 265
L++ASD + G L V+ G + +
Sbjct: 239 ILFMASDLASGITGQALDVNCGEYKA 264
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260 | Back alignment and structure |
|---|
Score = 210 bits (537), Expect = 1e-67
Identities = 77/271 (28%), Positives = 121/271 (44%), Gaps = 19/271 (7%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
M + L+G AL+TGG GIG+ I +L GA++ R + L + S G
Sbjct: 1 MAGRWN---LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG 57
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 119
D+ R + ++ + NHF GKL+ILVN A A+D + + ++ I
Sbjct: 58 FKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSI 117
Query: 120 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSI 179
+ + + A +LK G ++ IS+ A Y+ A K A+D +
Sbjct: 118 NFEAAYHLSVLAHPFLKASE--------RGNVVFISSVSGALAVPYEAVYGATKGAMDQL 169
Query: 180 TRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY----KFGEKWD 235
TR LA EW D IRVNG+ PG I T+ V + + + + + + GE +
Sbjct: 170 TRCLAFEWAKD-NIRVNGVGPGVIA-TSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKE 227
Query: 236 IAMAALYLASDAGKYVNGNTLIVDGGNWLSN 266
+A +L A YV G + VDGG ++N
Sbjct: 228 LAAMVAFLCFPAASYVTGQIIYVDGG-LMAN 257
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273 | Back alignment and structure |
|---|
Score = 207 bits (530), Expect = 2e-66
Identities = 69/262 (26%), Positives = 116/262 (44%), Gaps = 15/262 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LKG AL+TGG GIG+ I +L GA + R + L + G+ G D
Sbjct: 19 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCD 78
Query: 70 VRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
+ R + +++++ + F GKL+ILVN A A+D + + ++ + + +
Sbjct: 79 LLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLS 138
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
A LK G +I +S+ ++A SA+K A++ +T+SLA EW
Sbjct: 139 QIAYPLLKASQ--------NGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWA 190
Query: 189 TDYAIRVNGIAPGPIK----DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
IRVN +APG I +TA +E + G+ +++ +L
Sbjct: 191 -KDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLC 249
Query: 245 SDAGKYVNGNTLIVDGGNWLSN 266
A Y+ G + DGG + +N
Sbjct: 250 FPAASYITGQIIWADGG-FTAN 270
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255 | Back alignment and structure |
|---|
Score = 206 bits (528), Expect = 2e-66
Identities = 74/266 (27%), Positives = 115/266 (43%), Gaps = 14/266 (5%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
M + F L GK AL+TG G+GF + L GA + + R T+L +V L G
Sbjct: 1 MTALFD---LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG 57
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
A G+ DV +DIL+N A + P +L ++ VI+ +
Sbjct: 58 YDAHGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTN 117
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
F++ A K + GG IINI + A +AAK + +T
Sbjct: 118 LTSAFLVSRSAAKRMIARNS-------GGKIINIGSLTSQAARPTVAPYTAAKGGIKMLT 170
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA-TDYMAAYKFGEKWDIAMA 239
S+A EW + I+ N I PG I T + L ++ + ++G ++
Sbjct: 171 CSMAAEWA-QFNIQTNAIGPGYI-LTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGT 228
Query: 240 ALYLASDAGKYVNGNTLIVDGGNWLS 265
A++L+S A Y+NG + VDGG WL+
Sbjct: 229 AIFLSSKASDYINGQIIYVDGG-WLA 253
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273 | Back alignment and structure |
|---|
Score = 207 bits (530), Expect = 2e-66
Identities = 76/258 (29%), Positives = 125/258 (48%), Gaps = 21/258 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L K+A++TG SGIG + + GA + I GRRK VL +A+A + G A+G++ D
Sbjct: 27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---GGGAVGIQAD 83
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ R+ E G++D+L A G ++P +++ + + + G
Sbjct: 84 SANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQ 143
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+AL L +G ++ +T T T +A+KAA+ S R+ L+
Sbjct: 144 KALPLLARGSS----------VVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLK- 192
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDYMAAY----KFGEKWDIAMAALYL 243
D IR+N ++PGP +T G+ +LA + + +AA + G ++A AAL+L
Sbjct: 193 DRGIRINTLSPGPT-ETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFL 251
Query: 244 ASDAGKYVNGNTLIVDGG 261
ASD +V G L VDGG
Sbjct: 252 ASDDSSFVTGAELFVDGG 269
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255 | Back alignment and structure |
|---|
Score = 206 bits (526), Expect = 5e-66
Identities = 76/252 (30%), Positives = 117/252 (46%), Gaps = 11/252 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GK A++TG G+GIG EI++ GA++ + V + LG A D
Sbjct: 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCD 68
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ ++ + + I+ GK+DILVN A G D+ FR E++ F +
Sbjct: 69 ITSEQELSALADFAISKLGKVDILVNNAGGGG-PKPFDMPMADFRRAYELNVFSFFHLSQ 127
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
++K G GG+I+ I++ +++KAA + R++A + G
Sbjct: 128 LVAPEMEKNG--------GGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGE 179
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK 249
IRVNGIAPG I T + + EI K + + G+ DIA AAL+L S A
Sbjct: 180 -KNIRVNGIAPGAI-LTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAAS 237
Query: 250 YVNGNTLIVDGG 261
+V+G L V GG
Sbjct: 238 WVSGQILTVSGG 249
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260 | Back alignment and structure |
|---|
Score = 206 bits (526), Expect = 6e-66
Identities = 72/254 (28%), Positives = 118/254 (46%), Gaps = 12/254 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+ KVAL+T GIG I+ +L + GA + + R++ + VA L G+ G
Sbjct: 12 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCH 71
Query: 70 VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
V K ED R+V +N G +DILV NAA F D + + ++ ++ T +M
Sbjct: 72 VGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMT 131
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
+ ++K G GG ++ +S+ Y + +K A+ +T++LA+E
Sbjct: 132 KAVVPEMEKRG--------GGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELA 183
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
IRVN +APG IK T L + + + + + G D A +L S+
Sbjct: 184 -PRNIRVNCLAPGLIK-TNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSED 241
Query: 248 GKYVNGNTLIVDGG 261
Y+ G T++V GG
Sbjct: 242 ASYITGETVVVGGG 255
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266 | Back alignment and structure |
|---|
Score = 206 bits (526), Expect = 7e-66
Identities = 66/254 (25%), Positives = 106/254 (41%), Gaps = 11/254 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-HSLGIPAIGLEG 68
L GK AL+TG GIG +I+ GA + + GR + L +A AL G +
Sbjct: 18 LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAI 77
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
D+ + + + FG LD+LVN A + P D P F I ++ ++
Sbjct: 78 DLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLA 137
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
K + G GG II +++ +KA + T+ LA E G
Sbjct: 138 SAVGKAMVAAGE-------GGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELG 190
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
+ IR N + P + T ++ E + + +F +++ A ++LASDA
Sbjct: 191 -PHGIRANSVCPTVV-LTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLASDA 248
Query: 248 GKYVNGNTLIVDGG 261
+NG + VDGG
Sbjct: 249 ASMINGVDIPVDGG 262
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276 | Back alignment and structure |
|---|
Score = 206 bits (526), Expect = 1e-65
Identities = 65/254 (25%), Positives = 116/254 (45%), Gaps = 13/254 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GK AL+TG +GIG +++L + GA +A+ R L+ + +G A+ + D
Sbjct: 30 LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCD 89
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + + +++ G +DI V A + D+ F+ + + + G F+
Sbjct: 90 VTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQ 149
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS--AAKAAVDSITRSLALEW 187
A + + G GG II ++ + Q +KAAV +T+++A+E
Sbjct: 150 AAARAMVDQGL-------GGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVEL 202
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
+ IRVN ++PG I T V L + + + + G ++ LYLAS A
Sbjct: 203 A-PHQIRVNSVSPGYI-RTELVEPL--ADYHALWEPKIPLGRMGRPEELTGLYLYLASAA 258
Query: 248 GKYVNGNTLIVDGG 261
Y+ G+ +++DGG
Sbjct: 259 SSYMTGSDIVIDGG 272
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260 | Back alignment and structure |
|---|
Score = 205 bits (523), Expect = 2e-65
Identities = 68/256 (26%), Positives = 103/256 (40%), Gaps = 14/256 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L +VA++TGG IG L + GA + I + + AV L G + D
Sbjct: 11 LDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMD 70
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMC 128
V E V S G++DILV A V AED++ + ++I+ G F C
Sbjct: 71 VTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSC 130
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY--QIHVSAAKAAVDSITRSLALE 186
+ + + G+I+ I + Q +A+KA V RSLA E
Sbjct: 131 QAVGRIMLEQK--------QGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAE 182
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
W + IR N +AP I +T E+ + G+ ++A +LAS
Sbjct: 183 WA-PHGIRANAVAPTYI-ETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLAS 240
Query: 246 DAGKYVNGNTLIVDGG 261
DA + G + VD G
Sbjct: 241 DAASLMTGAIVNVDAG 256
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255 | Back alignment and structure |
|---|
Score = 203 bits (520), Expect = 4e-65
Identities = 60/256 (23%), Positives = 105/256 (41%), Gaps = 19/256 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+GK A++ GG G+G +L + GA + + GR ++ + G L D
Sbjct: 6 YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---GPRVHALRSD 62
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ + + + G +D+L A + L P + +S + +++ G F
Sbjct: 63 IADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQ 122
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+++GG I+ S+ SA+KAA+ S LA E
Sbjct: 123 RLTPLIREGGS----------IVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELL- 171
Query: 190 DYAIRVNGIAPGPIK----DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
IRVN ++PG I AG+++ E ++ + + G ++A A L+LA
Sbjct: 172 PRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAF 231
Query: 246 DAGKYVNGNTLIVDGG 261
+A + G L VDGG
Sbjct: 232 EAT-FTTGAKLAVDGG 246
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281 | Back alignment and structure |
|---|
Score = 203 bits (520), Expect = 8e-65
Identities = 75/266 (28%), Positives = 120/266 (45%), Gaps = 15/266 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG---IPAIGL 66
+ + L+TGGGSGIG ++ L GA++ I+GR L AV L +LG
Sbjct: 9 FQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYE 68
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTF 125
D+ ++ R V++ G+L +V+ A G+ + P + +R ++++ GT
Sbjct: 69 PTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTM 128
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
+ A + + +GG GG + IS+ + K+AVD + + A
Sbjct: 129 YVLKHAAREMVRGG--------GGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAAD 180
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
E G +RVN I PG I T V+ + E+ S + GE D+A A++L
Sbjct: 181 ELG-ASWVRVNSIRPGLI-RTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLL 238
Query: 245 SDAGKYVNGNTLIVDGGNWLSNPRDL 270
SDA +V G + VDGG L D
Sbjct: 239 SDAASFVTGQVINVDGGQMLRRGPDF 264
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 203 bits (519), Expect = 9e-65
Identities = 90/269 (33%), Positives = 134/269 (49%), Gaps = 17/269 (6%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH-SL 59
M+ F L+G+VAL+TGG G+GF I+ L + G ++ + R A L
Sbjct: 13 MKEVFD---LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY 69
Query: 60 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 119
G+ + DV E+ +++E+ FGKLD +VNAA N PAE+ + FR VIE+
Sbjct: 70 GVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEV 129
Query: 120 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV-SAAKAAVDS 178
+ GT+ +C EA L++ IINI + T I +A+K V S
Sbjct: 130 NLFGTYYVCREAFSLLRESDNPS--------IINIGSLTVEEVTMPNISAYAASKGGVAS 181
Query: 179 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA-TDYMAAYKFGEKWDIA 237
+T++LA EWG Y IRVN IAPG + T + + + + + G D+
Sbjct: 182 LTKALAKEWGR-YGIRVNVIAPGWYR-TKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLK 239
Query: 238 MAALYLASDAGKYVNGNTLIVDGGNWLSN 266
A++LAS+ KYV G + VDGG W +N
Sbjct: 240 GVAVFLASEEAKYVTGQIIFVDGG-WTAN 267
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266 | Back alignment and structure |
|---|
Score = 203 bits (518), Expect = 1e-64
Identities = 70/253 (27%), Positives = 106/253 (41%), Gaps = 11/253 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LK K L+TGG GIG I + GA I R + L ++ G G D
Sbjct: 12 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCD 71
Query: 70 VRKREDAVRVVESTINHFG-KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
R + +++++ + FG KLDIL+N P D + F I + + +
Sbjct: 72 ASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLS 131
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
A LK G G II +S+ + SA K A++ + R+LA EW
Sbjct: 132 QLAHPLLKASG--------CGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWA 183
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
+D IR N +AP I T + +E + +FGE +++ +L A
Sbjct: 184 SD-GIRANAVAPAVIA-TPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAA 241
Query: 249 KYVNGNTLIVDGG 261
Y+ G T+ VDGG
Sbjct: 242 SYITGQTICVDGG 254
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280 | Back alignment and structure |
|---|
Score = 202 bits (516), Expect = 3e-64
Identities = 67/274 (24%), Positives = 121/274 (44%), Gaps = 28/274 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP---AIGL 66
K ++TG +GIG ++ + GA + I GR L + G+ +
Sbjct: 4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV 63
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAA----AGNFLVPAEDLSPNGFRTVIEIDSV 122
DV + +++ ST+ FGK+D+LVN A F D + + ++++
Sbjct: 64 VADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQ 123
Query: 123 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH-YTATWYQIHVSAAKAAVDSITR 181
M + +L G I+N+S+ + A ++ + AKAA+D TR
Sbjct: 124 AVIEMTKKVKPHLVAS---------KGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTR 174
Query: 182 SLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMAAYK-------FGEK 233
S A++ + IRVN ++PG + +T + + P++ K ++MA++K G+
Sbjct: 175 STAIDLA-KFGIRVNSVSPGMV-ETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKP 232
Query: 234 WDIAMAALYLASD-AGKYVNGNTLIVDGGNWLSN 266
IA L+LA Y+ G +++ DGG L
Sbjct: 233 EHIANIILFLADRNLSFYILGQSIVADGGTSLVM 266
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251 | Back alignment and structure |
|---|
Score = 200 bits (511), Expect = 8e-64
Identities = 72/253 (28%), Positives = 114/253 (45%), Gaps = 10/253 (3%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GKVA++TGG GIG I+ + + GA + I GR V A ++ + + D
Sbjct: 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD-QIQFFQHD 62
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ ++ ++T FG + LVN A E+ + +R ++ ++ G F
Sbjct: 63 SSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTR 122
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
++ +K G G IIN+S+ + +A+K AV +++S AL+
Sbjct: 123 LGIQRMKNKGL-------GASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCAL 175
Query: 190 -DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
DY +RVN + PG I T V L E GE DIA +YLAS+
Sbjct: 176 KDYDVRVNTVHPGYI-KTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNES 234
Query: 249 KYVNGNTLIVDGG 261
K+ G+ +VDGG
Sbjct: 235 KFATGSEFVVDGG 247
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279 | Back alignment and structure |
|---|
Score = 200 bits (511), Expect = 2e-63
Identities = 65/256 (25%), Positives = 112/256 (43%), Gaps = 16/256 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LKGKVA +TG GIG+ ++ + GA +AI A + G+ + + +
Sbjct: 32 LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCN 91
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAA--AGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
+ + + FG +D+ V A + + + + +I +D G +
Sbjct: 92 ISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYC 151
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINIS--ATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
H K KK G+G +I S + Q + AKAA + +SLA+
Sbjct: 152 SHNIGKIFKKNGKGS--------LIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAI 203
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
EW RVN I+PG I DT ++ A +++++K + G ++ LYLAS
Sbjct: 204 EWAPF--ARVNTISPGYI-DTD-ITDFASKDMKAKWWQLTPLGREGLTQELVGGYLYLAS 259
Query: 246 DAGKYVNGNTLIVDGG 261
+A + G+ +++DGG
Sbjct: 260 NASTFTTGSDVVIDGG 275
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274 | Back alignment and structure |
|---|
Score = 200 bits (510), Expect = 2e-63
Identities = 60/261 (22%), Positives = 109/261 (41%), Gaps = 28/261 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-------VLRSAVAALHSLGIP 62
L GK +TG GIG I+L+ + GA +AI + + SA AA+++ G
Sbjct: 4 LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQ 63
Query: 63 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 122
+ L+ D+R+ + V +T++ FG +DILVN A+ +L D F + ++++
Sbjct: 64 GLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNAR 123
Query: 123 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV--SAAKAAVDSIT 180
G+F+ L +L + I+ ++ W+ H + AK + +T
Sbjct: 124 GSFVCAQACLPHLLQAP--------NPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVT 175
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
LA E+G + +N + P + T ++ L + +A AA
Sbjct: 176 LGLAAEFG-PQGVAINALWPRTVIATDAINMLPGVDAA----------ACRRPEIMADAA 224
Query: 241 LYLASDAGKYVNGNTLIVDGG 261
+ + +G LI D
Sbjct: 225 HAVLTREAAGFHGQFLIDDEV 245
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259 | Back alignment and structure |
|---|
Score = 199 bits (509), Expect = 2e-63
Identities = 78/265 (29%), Positives = 117/265 (44%), Gaps = 20/265 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+GK AL+TG GIG + + GA +AI R A A + G A ++ D
Sbjct: 6 LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---GPAAYAVQMD 62
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V +++ + +T+ H G LDILVN AA L P +++ + + I+ GT
Sbjct: 63 VTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQ 122
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
A + + GR GG IIN+++ A KAAV S+T+S L+
Sbjct: 123 AAARQMIAQGR-------GGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLDLI- 174
Query: 190 DYAIRVNGIAPGPIK---------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
+ I VN IAPG + A E + + + + G D+ A
Sbjct: 175 KHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMA 234
Query: 241 LYLASDAGKYVNGNTLIVDGGNWLS 265
++LAS Y+ T VDGGNW+S
Sbjct: 235 IFLASAESDYIVSQTYNVDGGNWMS 259
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244 | Back alignment and structure |
|---|
Score = 198 bits (505), Expect = 6e-63
Identities = 65/256 (25%), Positives = 102/256 (39%), Gaps = 19/256 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L G+ L+TG G GIG L GA + + R + L S V + D
Sbjct: 5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG----IEPVCVD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ E E + G +D+LVN AA L P +++ F E++ +
Sbjct: 61 LGDWEA----TERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQ 116
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ L G G I+N+S+ A + K A+D +T+ +ALE G
Sbjct: 117 IVARGLIARGV-------PGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELG- 168
Query: 190 DYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
+ IRVN + P + T+ + + + KF E + A L+L SD
Sbjct: 169 PHKIRVNAVNPTVV-MTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRS 227
Query: 249 KYVNGNTLIVDGGNWL 264
G+TL V+GG +
Sbjct: 228 GMTTGSTLPVEGG-FW 242
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258 | Back alignment and structure |
|---|
Score = 198 bits (506), Expect = 6e-63
Identities = 68/255 (26%), Positives = 114/255 (44%), Gaps = 12/255 (4%)
Query: 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLE 67
+ + K AL+TG G+G +++L ++G I I R K + LG+ + ++
Sbjct: 1 MEQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVK 60
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
+V + + + FG+LD+ VN AA L P +L + + I++
Sbjct: 61 ANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFC 120
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
EA K ++K G GG I++IS+ V +KAA++++TR LA+E
Sbjct: 121 AQEAAKLMEKNG--------GGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVEL 172
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
I VN ++ G I DT + E++ A A + E D+ +L S
Sbjct: 173 S-PKQIIVNAVSGGAI-DTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSS 230
Query: 247 AGKYVNGNTLIVDGG 261
+ G T+IVDGG
Sbjct: 231 KADMIRGQTIIVDGG 245
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254 | Back alignment and structure |
|---|
Score = 197 bits (504), Expect = 9e-63
Identities = 78/255 (30%), Positives = 106/255 (41%), Gaps = 16/255 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L G A +TG GSGIG EI GA + ++ R L A L A + D
Sbjct: 9 LDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL--GAAVAARIVAD 66
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V E + ILVN+A L A + +R V+ ++ G F
Sbjct: 67 VTDAEAMTAAAA-EAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASR 125
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS--AAKAAVDSITRSLALEW 187
+ + G G I+N+ + Q S A+K AV +TR+LA EW
Sbjct: 126 AFGRAMVARGAGA--------IVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEW 177
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
+RVN +APG + T K+ E+ D + GE +IA AAL+LAS
Sbjct: 178 A-GRGVRVNALAPGYV-ATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLASP 235
Query: 247 AGKYVNGNTLIVDGG 261
A YV G L VDGG
Sbjct: 236 AASYVTGAILAVDGG 250
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273 | Back alignment and structure |
|---|
Score = 197 bits (504), Expect = 2e-62
Identities = 79/265 (29%), Positives = 127/265 (47%), Gaps = 17/265 (6%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
M PF L G+ A++TG GSGIG I+ + GA + GR ++ + G
Sbjct: 23 MTGPFS---LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDG-VKEVADEIADGG 78
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
A + D+ E A V E + ++D+LVN A PAE++S +R V+ ++
Sbjct: 79 GSAEAVVADLADLEGAANVAE-ELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVN 137
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
+++ + G G+ I+ I++ L + +A+K AV +T
Sbjct: 138 LDAAWVLSRSFGTAMLAHGSGR--------IVTIASMLSFQGGRNVAAYAASKHAVVGLT 189
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA-TDYMAAYKFGEKWDIAMA 239
R+LA EW + VN +APG + TA + L ++ R+ T + A ++ D+
Sbjct: 190 RALASEWAG-RGVGVNALAPGYV-VTANTAALRADDERAAEITARIPAGRWATPEDMVGP 247
Query: 240 ALYLASDAGKYVNGNTLIVDGGNWL 264
A++LASDA YV+G L VDGG WL
Sbjct: 248 AVFLASDAASYVHGQVLAVDGG-WL 271
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278 | Back alignment and structure |
|---|
Score = 197 bits (502), Expect = 4e-62
Identities = 76/269 (28%), Positives = 116/269 (43%), Gaps = 28/269 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP---AIGL 66
KVA++TG +GIG ++ + GA + I GR L + + G+ +
Sbjct: 4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSV 63
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAA----AGNFLVPAEDLSPNGFRTVIEIDSV 122
DV ++ +T+ FGKLDILVN A + S + + ++
Sbjct: 64 VADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLR 123
Query: 123 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH-YTATWYQIHVSAAKAAVDSITR 181
+ +A+ +L G I+NIS+ AT + S AKAA+D TR
Sbjct: 124 SVIALTKKAVPHLSST---------KGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTR 174
Query: 182 SLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMAAYK-------FGEK 233
+ A++ + IRVN I+PG + T S + PEE K MA K G+
Sbjct: 175 NTAIDLI-QHGIRVNSISPGLV-ATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQP 232
Query: 234 WDIAMAALYLASD-AGKYVNGNTLIVDGG 261
DIA +LA Y+ G+ L+VDGG
Sbjct: 233 QDIAEVIAFLADRKTSSYIIGHQLVVDGG 261
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261 | Back alignment and structure |
|---|
Score = 196 bits (500), Expect = 5e-62
Identities = 77/256 (30%), Positives = 124/256 (48%), Gaps = 13/256 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+GKVAL+TG GSG G ++ + K GA + I+ R K +G A+ + D
Sbjct: 7 LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGE---IGDAALAVAAD 63
Query: 70 VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
+ K D VE+ ++ FGK+DILV NA G+ AE + P F ++ ++ G ++M
Sbjct: 64 ISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMT 123
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
+ + + K+ G +I+N+++T +A K V S+T++LA+E
Sbjct: 124 SKLIPHFKENGAK----GQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELA 179
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLA---PEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
IRV + P +T ++ EEIR K D + + + D+A AA +L S
Sbjct: 180 -PAKIRVVALNPVAG-ETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCS 237
Query: 246 DAGKYVNGNTLIVDGG 261
+ G L VDGG
Sbjct: 238 PQASMITGVALDVDGG 253
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256 | Back alignment and structure |
|---|
Score = 195 bits (499), Expect = 7e-62
Identities = 80/256 (31%), Positives = 125/256 (48%), Gaps = 19/256 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L VA++TG +GIG I+ K GA++ + + + AA+ G AIGLE +
Sbjct: 10 LNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECN 69
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGN----FLVPAEDLSPNGFRTVIEIDSVGTF 125
V + V+++ ++ FGK+ +LVN A G F +P D F +++ F
Sbjct: 70 VTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSD-----FEWAFKLNLFSLF 124
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
+ A +++K G GG I+NIS+ ++KAAV+ +TR++A
Sbjct: 125 RLSQLAAPHMQKAG--------GGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAF 176
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
+ G IRVN IAPG I T ++ + EI + + GE DIA AAL+L S
Sbjct: 177 DVGP-MGIRVNAIAPGAI-KTDALATVLTPEIERAMLKHTPLGRLGEAQDIANAALFLCS 234
Query: 246 DAGKYVNGNTLIVDGG 261
A +++G L V GG
Sbjct: 235 PAAAWISGQVLTVSGG 250
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297 | Back alignment and structure |
|---|
Score = 197 bits (502), Expect = 7e-62
Identities = 68/272 (25%), Positives = 120/272 (44%), Gaps = 26/272 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA---IGL 66
GK ++TG +GIG ++ K GA + I GR + L + G+PA +
Sbjct: 24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAV 83
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGT 124
DV + ++ +T+ FGK+DILVN A N D ++ +++
Sbjct: 84 VADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAV 143
Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINI-SATLHYTATWYQIHVSAAKAAVDSITRSL 183
M + ++L K + G I+N+ S A + + AKAA+D TR
Sbjct: 144 IEMTQKTKEHLIK---------TKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCT 194
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMAAYK-------FGEKWD 235
A++ + +RVN ++PG + T + + PE K ++ + K G+ +
Sbjct: 195 AIDLI-QHGVRVNSVSPGAV-ATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEE 252
Query: 236 IAMAALYLAS-DAGKYVNGNTLIVDGGNWLSN 266
IA ++LA + Y+ G +++ DGG+ L
Sbjct: 253 IANIIVFLADRNLSSYIIGQSIVADGGSTLVM 284
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280 | Back alignment and structure |
|---|
Score = 196 bits (500), Expect = 9e-62
Identities = 76/257 (29%), Positives = 113/257 (43%), Gaps = 15/257 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+GK+A++TG SGIG +L + GA + + R L + G A L GD
Sbjct: 6 LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGD 65
Query: 70 VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
V +VE + FG LD NA A + LS G+R ++ + F+
Sbjct: 66 VGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAA 125
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV-SAAKAAVDSITRSLALEW 187
+ + G GG + S+ + +TA + + +A+KA + + ++LA+E
Sbjct: 126 KYQVPAIAALG--------GGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVEL 177
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKL---APEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
G IRVN + PG DT A E R A + +IA AALYLA
Sbjct: 178 GAR-GIRVNALLPGGT-DTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLA 235
Query: 245 SDAGKYVNGNTLIVDGG 261
SD +V G L+ DGG
Sbjct: 236 SDGASFVTGAALLADGG 252
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283 | Back alignment and structure |
|---|
Score = 196 bits (500), Expect = 9e-62
Identities = 79/263 (30%), Positives = 111/263 (42%), Gaps = 21/263 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
VAL+TG GSGIG +L L G + +GR +T + + G AI LE D
Sbjct: 26 QPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEAD 85
Query: 70 VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
V V + FG LDI+V NA P +DL P + I ++ GTF+
Sbjct: 86 VSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTL 145
Query: 129 HEALKYLKKGGRGQASSSSGGIIINIS--ATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
H + YLK+ G GG I+ +S T +A KAA +I + LALE
Sbjct: 146 HLTVPYLKQRG--------GGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALE 197
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK--------FGEKWDIAM 238
G + IRVN + PG I +T A G D+A
Sbjct: 198 LG-KHHIRVNAVCPGAI-ETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAE 255
Query: 239 AALYLASDAGKYVNGNTLIVDGG 261
+L S+ ++V G+ + +DGG
Sbjct: 256 LIRFLVSERARHVTGSPVWIDGG 278
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244 | Back alignment and structure |
|---|
Score = 195 bits (497), Expect = 1e-61
Identities = 63/258 (24%), Positives = 109/258 (42%), Gaps = 19/258 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
G AL+TG G GIG + L GA + + R + L S + D
Sbjct: 5 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG----IEPVCVD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ + E + G +D+LVN AA + P +++ F ++ F +
Sbjct: 61 LGDWDA----TEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQ 116
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ + G G I+N+S+ + + I S+ K A+ +T+++A+E G
Sbjct: 117 MVARDMINRGV-------PGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELG- 168
Query: 190 DYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
+ IRVN + P + T K+ A E K + KF E D+ + L+L SD
Sbjct: 169 PHKIRVNSVNPTVV-LTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRS 227
Query: 249 KYVNGNTLIVDGGNWLSN 266
+G ++VD G +L++
Sbjct: 228 ASTSGGGILVDAG-YLAS 244
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261 | Back alignment and structure |
|---|
Score = 195 bits (497), Expect = 1e-61
Identities = 78/254 (30%), Positives = 128/254 (50%), Gaps = 11/254 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEG 68
L+GKV ++TG +G+G ++++ A + + R + S + + +G AI ++G
Sbjct: 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV D + +V+S I FGKLD+++N A V + ++S + + VI+ + G F+
Sbjct: 65 DVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGS 124
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
EA+KY + G +IN+S+ +H +A+K + +T +LALE+
Sbjct: 125 REAIKYFVENDI-------KGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYA 177
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
IRVN I PG I +T ++ A E R+ + GE +IA A +LAS
Sbjct: 178 P-KGIRVNNIGPGAI-NTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSE 235
Query: 248 GKYVNGNTLIVDGG 261
YV G TL DGG
Sbjct: 236 ASYVTGITLFADGG 249
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265 | Back alignment and structure |
|---|
Score = 195 bits (497), Expect = 2e-61
Identities = 64/266 (24%), Positives = 102/266 (38%), Gaps = 25/266 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL--HSLGIPAIGLE 67
L VA++TGG SGIG L + GAA+A R LR+A +AL G
Sbjct: 6 LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASV 65
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
DV E+ G ILVN A + + + + +++
Sbjct: 66 CDVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHP 125
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
L L+ I+ +++ L + + SAA+A V ++ RS+A E+
Sbjct: 126 VRAFLPQLESRA--------DAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEF 177
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK------------FGEKWD 235
+RVNGI G + ++ + E + D+ G+ +
Sbjct: 178 APK-GVRVNGILIGLV-ESGQWRRR-FEAREERELDWAQWTAQLARNKQIPLGRLGKPIE 234
Query: 236 IAMAALYLASDAGKYVNGNTLIVDGG 261
A A L+LAS Y G+ + V GG
Sbjct: 235 AARAILFLASPLSAYTTGSHIDVSGG 260
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262 | Back alignment and structure |
|---|
Score = 194 bits (496), Expect = 2e-61
Identities = 56/255 (21%), Positives = 98/255 (38%), Gaps = 16/255 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI---MGRRKTVLRSAVAALHSLGIPAIGL 66
LK KV ++ GG +G + + + + L G
Sbjct: 9 LKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALY 68
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
+ D+ E+ ++ + FGK+DI +N P + S F + I++ +
Sbjct: 69 QSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYF 128
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
+A K++ G II I+ +L T + + KA V+ TR+ + E
Sbjct: 129 FIKQAAKHMNPNGH----------IITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKE 178
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
I VN IAPGP+ DT+ +E + + + DIA +L +D
Sbjct: 179 LM-KQQISVNAIAPGPM-DTSFFYGQETKESTAFHKSQAMGNQLTKIEDIAPIIKFLTTD 236
Query: 247 AGKYVNGNTLIVDGG 261
++NG T+ +GG
Sbjct: 237 GW-WINGQTIFANGG 250
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276 | Back alignment and structure |
|---|
Score = 195 bits (497), Expect = 3e-61
Identities = 69/264 (26%), Positives = 116/264 (43%), Gaps = 14/264 (5%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
M F L G++AL+TGG GIG I+ L + GA + I R L + G
Sbjct: 21 MHPYFS---LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG 77
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
+ D+ A R+ ++ +LDILVN A ++ E +G+ V++++
Sbjct: 78 -DCQAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLN 136
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV-SAAKAAVDSI 179
F + L L++ + + +INI + +A Q + +KAA+ +
Sbjct: 137 VTSVFSCIQQLLPLLRRSASAE----NPARVINIGSVAGISAMGEQAYAYGPSKAALHQL 192
Query: 180 TRSLALEWGTDYAIRVNGIAPGPI--KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA 237
+R LA E I VN IAPG + T + + + + ++G ++A
Sbjct: 193 SRMLAKELV-GEHINVNVIAPGRFPSRMTRHI--ANDPQALEADSASIPMGRWGRPEEMA 249
Query: 238 MAALYLASDAGKYVNGNTLIVDGG 261
A+ LA AG Y+ GN + +DGG
Sbjct: 250 ALAISLAGTAGAYMTGNVIPIDGG 273
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271 | Back alignment and structure |
|---|
Score = 194 bits (495), Expect = 3e-61
Identities = 72/254 (28%), Positives = 122/254 (48%), Gaps = 15/254 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+ KVA++TG GIG E S L + GA + + +T L A A++ G A+ D
Sbjct: 9 LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV---GRGAVHHVVD 65
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAA--AGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
+ +++ TI+ FG+LDI+ N A + + ++ + + +++ GT +M
Sbjct: 66 LTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLM 125
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
C A+ L G GG I+NIS+ + A + KAA++++TR +A ++
Sbjct: 126 CKYAIPRLISAG--------GGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQY 177
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
G +R N IAPG + T + P+ I + A + GE +IA +LASD
Sbjct: 178 GRH-GVRCNAIAPGLV-RTPRLEVGLPQPIVDIFATHHLAGRIGEPHEIAELVCFLASDR 235
Query: 248 GKYVNGNTLIVDGG 261
++ G + D G
Sbjct: 236 AAFITGQVIAADSG 249
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259 | Back alignment and structure |
|---|
Score = 193 bits (494), Expect = 4e-61
Identities = 59/260 (22%), Positives = 105/260 (40%), Gaps = 16/260 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEG 68
+ ++ G G IG +++ + GA + + +AVA + LG A+ ++
Sbjct: 6 FTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKA 65
Query: 69 DVRKREDAVRVVESTINHFGKLDILVN-AAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
D+ + + + + FG++ LV+ A ++ + V++++ F+
Sbjct: 66 DLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLT 125
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIHVSAAKAAVDSITRSLALE 186
AL + KGG I+ S+ + + +K AV + TR LA E
Sbjct: 126 AKTALPKMAKGGA----------IVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKE 175
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
G IRVN + PG I T E+R + + + G D+A +LASD
Sbjct: 176 VGPK--IRVNAVCPGMI-STTFHDTFTKPEVRERVAGATSLKREGSSEDVAGLVAFLASD 232
Query: 247 AGKYVNGNTLIVDGGNWLSN 266
YV G ++GG S
Sbjct: 233 DAAYVTGACYDINGGVLFSE 252
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263 | Back alignment and structure |
|---|
Score = 193 bits (492), Expect = 7e-61
Identities = 73/264 (27%), Positives = 113/264 (42%), Gaps = 22/264 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEG 68
+ GKVA++TG SGIG I+ K GA I ++ R+ L A +L G+ + +
Sbjct: 5 ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAV 64
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV E VVES + FG DILVN A + + ++ E+ + +
Sbjct: 65 DVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLA 124
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
+ ++ G GG II+ ++ WY+ + KAA+ +++LA E
Sbjct: 125 RGLVPGMRARG--------GGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVI 176
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-----------FGEKWDIA 237
D IRVN I PG I T K A E + D+ + F ++A
Sbjct: 177 KD-NIRVNCINPGLI-LTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELA 234
Query: 238 MAALYLASDAGKYVNGNTLIVDGG 261
++L S+ Y G+ VDGG
Sbjct: 235 NFFVFLCSERATYSVGSAYFVDGG 258
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254 | Back alignment and structure |
|---|
Score = 192 bits (491), Expect = 8e-61
Identities = 68/255 (26%), Positives = 120/255 (47%), Gaps = 12/255 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LK KV ++TG GSGIG I+ + + + + + + L V L +G +G++ D
Sbjct: 5 LKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKAD 64
Query: 70 VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
V K++D V T + ++D+L NA + + P ++S + V+ ++ F
Sbjct: 65 VSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSS 124
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
+ + K G G+I+N ++ + + AK + +TRS+A +G
Sbjct: 125 RAVIPIMLKQG--------KGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYG 176
Query: 189 TDYAIRVNGIAPGPIKD--TAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
D IR + PG +K G SK + +R+ + + E DIA ++LASD
Sbjct: 177 -DQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASD 235
Query: 247 AGKYVNGNTLIVDGG 261
+VNG+ ++VDGG
Sbjct: 236 EASFVNGDAVVVDGG 250
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253 | Back alignment and structure |
|---|
Score = 192 bits (491), Expect = 1e-60
Identities = 73/257 (28%), Positives = 114/257 (44%), Gaps = 18/257 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+GKVAL+TGG SG+G E+ L GA +A + + A L G ++ + D
Sbjct: 4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V D V+ + G L++LVN A E F +++I++ FI C
Sbjct: 61 VSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQ 120
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ + +K+ GG IIN+++ + SA+KAAV ++TR+ AL
Sbjct: 121 QGIAAMKET---------GGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRK 171
Query: 190 D-YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY----KFGEKWDIAMAALYLA 244
YAIRVN I P I T + P+ + + + + IA L+LA
Sbjct: 172 QGYAIRVNSIHPDGI-YTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLA 230
Query: 245 SDAGKYVNGNTLIVDGG 261
SD ++G+ L D
Sbjct: 231 SDESSVMSGSELHADNS 247
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266 | Back alignment and structure |
|---|
Score = 192 bits (490), Expect = 2e-60
Identities = 68/256 (26%), Positives = 114/256 (44%), Gaps = 11/256 (4%)
Query: 8 DILKGKVALLTGG-GSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP-AIG 65
+LKGKV L+T G+GIG + + GA + I + L L LG+
Sbjct: 18 GLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEA 77
Query: 66 LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 125
+ DV E ++ T+ G+LD+LVN A P D++ + V+ +
Sbjct: 78 VVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVM 137
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
AL+Y + G G+I+N ++ L + A Q H +AAKA V ++TR A+
Sbjct: 138 RATRAALRYFRGVDHG-------GVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAI 190
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
E ++ +R+N ++P + K + E+ + A + E W++A +LAS
Sbjct: 191 EAV-EFGVRINAVSPSIA-RHKFLEKTSSSELLDRLASDEAFGRAAEPWEVAATIAFLAS 248
Query: 246 DAGKYVNGNTLIVDGG 261
D Y+ G + V
Sbjct: 249 DYSSYMTGEVVSVSSQ 264
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277 | Back alignment and structure |
|---|
Score = 192 bits (490), Expect = 2e-60
Identities = 73/257 (28%), Positives = 124/257 (48%), Gaps = 18/257 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L +V ++TGGGSGIG + K+GA + + + + G A G+ D
Sbjct: 25 LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI---GSKAFGVRVD 81
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V +DA +VE T +G++D+LVN A + + ++ ++ G F+
Sbjct: 82 VSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSK 141
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ +++ G GG IIN ++ +A + A+K A+ S+TR++A++
Sbjct: 142 YVIPVMRRNG--------GGSIINTTSYTATSAIADRTAYVASKGAISSLTRAMAMDHAK 193
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
+ IRVN +APG I D+ +K+ P ++RS + G +IA A L+LA
Sbjct: 194 E-GIRVNAVAPGTI-DSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLA 251
Query: 245 SDAGKYVNGNTLIVDGG 261
SD ++ G+ L VDGG
Sbjct: 252 SDRSRFATGSILTVDGG 268
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265 | Back alignment and structure |
|---|
Score = 192 bits (489), Expect = 3e-60
Identities = 56/260 (21%), Positives = 106/260 (40%), Gaps = 18/260 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEG 68
K ++TGG GIG + + GA +A++ R + G+ +
Sbjct: 12 FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQC 71
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV + + ++ G + L+ A + + PA +L+ F V +++ G F C
Sbjct: 72 DVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTC 131
Query: 129 HEALKYLKKGGRGQASSSSGGIIINIS-------ATLHYTATWYQIHVSAAKAAVDSITR 181
K + + G I+ S + Q+ +++KAA ++ +
Sbjct: 132 RAVAKLWLQKQQ-------KGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVK 184
Query: 182 SLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241
LA EW IRVN ++PG + +T + + ++IR + +F + ++ A+
Sbjct: 185 GLAAEWA-SAGIRVNALSPGYV-NTDQTAHM-DKKIRDHQASNIPLNRFAQPEEMTGQAI 241
Query: 242 YLASDAGKYVNGNTLIVDGG 261
L SD Y+ G +DGG
Sbjct: 242 LLLSDHATYMTGGEYFIDGG 261
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270 | Back alignment and structure |
|---|
Score = 191 bits (489), Expect = 3e-60
Identities = 80/258 (31%), Positives = 125/258 (48%), Gaps = 22/258 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
GKV ++TGGG GIG I GA + I + ++ R+ L A+ + D
Sbjct: 7 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG----AVFILCD 62
Query: 70 VRKREDAVRVVESTINHFGKLDILVN-AAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
V + +D +V TI FG+LD +VN A E+ S GFR ++E++ +GT+ +
Sbjct: 63 VTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLT 122
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
AL YL+K G +INIS+ + + A K AV ++T++LAL+
Sbjct: 123 KLALPYLRKS---------QGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDES 173
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
Y +RVN I+PG I T +LA P + + G+ ++ AA++L
Sbjct: 174 -PYGVRVNCISPGNI-WTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFL 231
Query: 244 ASDAGKYVNGNTLIVDGG 261
AS+A + G L+V GG
Sbjct: 232 ASEAN-FCTGIELLVTGG 248
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258 | Back alignment and structure |
|---|
Score = 191 bits (487), Expect = 5e-60
Identities = 58/265 (21%), Positives = 106/265 (40%), Gaps = 19/265 (7%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAALHSLGIPAIGLEGD 69
KVA++TGG GIG IS +L G IA+ + +++ + + + A+ + D
Sbjct: 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLD 61
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + + ++ G D+LVN A + P +++ + + ++ F
Sbjct: 62 VTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQ 121
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
A + + G G IIN ++ S K AV +T++ A E
Sbjct: 122 AASRKFDELGV-------KGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAP 174
Query: 190 DYAIRVNGIAPGPIK---------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
VN APG + + + ++ E + + +A + D+A
Sbjct: 175 -KGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLV 233
Query: 241 LYLASDAGKYVNGNTLIVDGGNWLS 265
+LAS+ YV G ++VDGG +
Sbjct: 234 SFLASENSNYVTGQVMLVDGGMLYN 258
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262 | Back alignment and structure |
|---|
Score = 191 bits (487), Expect = 5e-60
Identities = 64/268 (23%), Positives = 110/268 (41%), Gaps = 26/268 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
GKV L+TG G IG +L+L + G AIA++ + L A A++ G+ A D
Sbjct: 5 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCD 64
Query: 70 VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
V E + V+S + FGK+D L NA P +D + F V+ I+ G F +
Sbjct: 65 VTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVL 124
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
+ + G I+N ++ +K A+ ++T + AL+
Sbjct: 125 KAVSRQMITQN--------YGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLA 176
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLA---------------PEEIRSKATDYMAAYKFGEK 233
Y IRVN I+PG + + + P+ + + + ++G+
Sbjct: 177 -PYNIRVNAISPGYM-GPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDI 234
Query: 234 WDIAMAALYLASDAGKYVNGNTLIVDGG 261
+I +L D ++ G L + GG
Sbjct: 235 NEIPGVVAFLLGDDSSFMTGVNLPIAGG 262
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253 | Back alignment and structure |
|---|
Score = 190 bits (484), Expect = 9e-60
Identities = 71/255 (27%), Positives = 111/255 (43%), Gaps = 16/255 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+ KV ++TG G GIG + L + GAA+ + + + + G AI + D
Sbjct: 7 FENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVD 66
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLV---PAEDLSPNGFRTVIEIDSVGTFI 126
V E A + + T+ FG +D LVN AA + + P ++ + ++ G
Sbjct: 67 VSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALW 126
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
K + K G GG I+N S+T A Y + AK ++ +T+ L+ E
Sbjct: 127 CTRAVYKKMTKRG--------GGAIVNQSST---AAWLYSNYYGLAKVGINGLTQQLSRE 175
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
G IR+N IAPGPI DT P+E+ + + G D+ L+L SD
Sbjct: 176 LGG-RNIRINAIAPGPI-DTEANRTTTPKEMVDDIVKGLPLSRMGTPDDLVGMCLFLLSD 233
Query: 247 AGKYVNGNTLIVDGG 261
++ G VDGG
Sbjct: 234 EASWITGQIFNVDGG 248
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285 | Back alignment and structure |
|---|
Score = 190 bits (486), Expect = 1e-59
Identities = 60/275 (21%), Positives = 102/275 (37%), Gaps = 26/275 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-------VLRSAVAALHSLGIP 62
L+GK ++GG GIG I+ ++ GA +A++ + + +A + G
Sbjct: 7 LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQ 66
Query: 63 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 122
A+ + GD+R + V T+ FG +DI VN A+ L E++ F + I
Sbjct: 67 ALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVR 126
Query: 123 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV-SAAKAAVDSITR 181
GT+ + + ++K I+ +S + W + AK +
Sbjct: 127 GTYAVSQSCIPHMKGRD--------NPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCAL 178
Query: 182 SLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241
+A E D I N + P TA V L + A + + A AA
Sbjct: 179 GIAEELR-DAGIASNTLWPRTTVATAAVQNLLGGDE--------AMARSRKPEVYADAAY 229
Query: 242 YLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVN 276
+ + GNTL+ + S DL
Sbjct: 230 VVLNKPS-SYTGNTLLCEDVLLESGVTDLSVYDCV 263
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249 | Back alignment and structure |
|---|
Score = 189 bits (482), Expect = 2e-59
Identities = 80/253 (31%), Positives = 122/253 (48%), Gaps = 13/253 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LK K+A++TGG +GIG I+ + GA IAI A AA+ +LG + ++ D
Sbjct: 5 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA--PEAEAAIRNLGRRVLTVKCD 62
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + D + I+ FG+ DILVN A L+P ++L+ ++ EI+ F+M
Sbjct: 63 VSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAK 122
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ +K+ G G IIN+++T ++ H + KAA TR+LA + G
Sbjct: 123 AFVPGMKRNG--------WGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGK 174
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-FGEKWDIAMAALYLASDAG 248
I VN IAP + TA A + + + A D+ AA +LASD
Sbjct: 175 -DGITVNAIAPSLV-RTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDA 232
Query: 249 KYVNGNTLIVDGG 261
++ G TL VDGG
Sbjct: 233 SFITGQTLAVDGG 245
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256 | Back alignment and structure |
|---|
Score = 189 bits (482), Expect = 2e-59
Identities = 71/262 (27%), Positives = 112/262 (42%), Gaps = 17/262 (6%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
KVAL+TG G GIG I+L+L K G A+AI ++ + ++ G A+ ++ DV
Sbjct: 3 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 62
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
R+ VE G D++VN A P E ++P V I+ G A+
Sbjct: 63 RDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAV 122
Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
+ KK G GG IIN + + S++K AV +T++ A +
Sbjct: 123 EAFKKEGH-------GGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAP-LG 174
Query: 193 IRVNGIAPGPIK---------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
I VNG PG +K + + ++ + + E D+A YL
Sbjct: 175 ITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYL 234
Query: 244 ASDAGKYVNGNTLIVDGGNWLS 265
AS Y+ G +L++DGG +
Sbjct: 235 ASPDSDYMTGQSLLIDGGMVFN 256
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263 | Back alignment and structure |
|---|
Score = 189 bits (482), Expect = 3e-59
Identities = 71/264 (26%), Positives = 119/264 (45%), Gaps = 20/264 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L G+ A++TGG GIG I+ L K GA +AI ++ VA L +E D
Sbjct: 10 LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAG---LENGGFAVEVD 66
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V KR ++ I+ G D+L A + + PA D++ + ++++ G F+
Sbjct: 67 VTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQ 126
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
A ++ + G+I+N ++ H SA+K AV T++LA E
Sbjct: 127 IACRHFLASN-------TKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAP 179
Query: 190 DYAIRVNGIAPGPIK---------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
IRVN + PG +K A + + PE +R++ + E D+A
Sbjct: 180 -KNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVV 238
Query: 241 LYLASDAGKYVNGNTLIVDGGNWL 264
++LASDA +++ G + V GG +
Sbjct: 239 VFLASDAARFMTGQGINVTGGVRM 262
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256 | Back alignment and structure |
|---|
Score = 187 bits (478), Expect = 1e-58
Identities = 77/257 (29%), Positives = 117/257 (45%), Gaps = 21/257 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
GK L+TGG GIG I+ + GA +A+ R VA I + D
Sbjct: 4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK--EVAE----AIGGAFFQVD 57
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ + VR VE G++D+LVN AA A + +R V+E++ +
Sbjct: 58 LEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSA 117
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
A + ++K G GG I+N+++ A +A+K + ++TRSLAL+
Sbjct: 118 LAAREMRKVG--------GGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLA- 168
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
IRVN +APG I T V + PE R D A + G+ ++A A L+LA
Sbjct: 169 PLRIRVNAVAPGAI-ATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLA 227
Query: 245 SDAGKYVNGNTLIVDGG 261
S+ ++ G L VDGG
Sbjct: 228 SEKASFITGAILPVDGG 244
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250 | Back alignment and structure |
|---|
Score = 187 bits (477), Expect = 1e-58
Identities = 62/255 (24%), Positives = 109/255 (42%), Gaps = 15/255 (5%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-HSLGIPAIGLEGDV 70
+VA++TG SG G I+ + G +A + L H+ + + DV
Sbjct: 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADV 61
Query: 71 RKREDAVRVVESTINHFGKLDILVNAA---AGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
D + +T+ FG +D+LVN A + F V+ ++ G F+
Sbjct: 62 ADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLG 121
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
C L ++ G G+I+NI++ A + + +K AV +T+S+A+++
Sbjct: 122 CRAVLPHMLLQG--------AGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDY 173
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
IR N + PG I +T E+R + + + G +A A ++LA +
Sbjct: 174 AGS-GIRCNAVCPGMI-ETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGE 231
Query: 247 AGKYVNGNTLIVDGG 261
YVNG L++DG
Sbjct: 232 DATYVNGAALVMDGA 246
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267 | Back alignment and structure |
|---|
Score = 187 bits (478), Expect = 1e-58
Identities = 73/253 (28%), Positives = 108/253 (42%), Gaps = 13/253 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEG 68
KVA++TG GIG I+ +L G + I + + + G A+ +
Sbjct: 25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQA 84
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV R+ + FG +D+LVN A L + F VI ++ GTF
Sbjct: 85 DVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTL 144
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
EA + L+ GGR IIN+S + +AAKA V+++T L+ E
Sbjct: 145 REAAQRLRVGGR----------IINMSTSQVGLLHPSYGIYAAAKAGVEAMTHVLSKELR 194
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
I VN +APGP T + +E+R + + G DIA A +LA G
Sbjct: 195 G-RDITVNAVAPGPT-ATDLFLEGKSDEVRDRFAKLAPLERLGTPQDIAGAVAFLAGPDG 252
Query: 249 KYVNGNTLIVDGG 261
+VNG L +GG
Sbjct: 253 AWVNGQVLRANGG 265
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258 | Back alignment and structure |
|---|
Score = 186 bits (475), Expect = 2e-58
Identities = 60/256 (23%), Positives = 116/256 (45%), Gaps = 10/256 (3%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEG 68
LKGK L+TG GIG + + GA + + GR+ + +A++ + G A
Sbjct: 5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAA 64
Query: 69 DVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
D+ E ++V+ + FG +D+L+ NA P ++ + V++ + +
Sbjct: 65 DLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMT 124
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIHVSAAKAAVDSITRSLALE 186
AL +L + S +I+ + +T AAKA + ++ ++
Sbjct: 125 TKFALPHLAAAAKA---SGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVDF 181
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
D +R N ++PG + DTA + +++R + ++ + +FG ++A A L+ AS
Sbjct: 182 HTKD-GVRFNIVSPGTV-DTAFHADK-TQDVRDRISNGIPMGRFGTAEEMAPAFLFFASH 238
Query: 247 -AGKYVNGNTLIVDGG 261
A Y+ G L ++GG
Sbjct: 239 LASGYITGQVLDINGG 254
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266 | Back alignment and structure |
|---|
Score = 185 bits (472), Expect = 9e-58
Identities = 62/257 (24%), Positives = 110/257 (42%), Gaps = 25/257 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+GKVAL+TG GIG + L GA +A+ R + +AA + L GD
Sbjct: 26 FEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRA----VAGIAA-------DLHLPGD 74
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+R+ A + + G+LDI+VN A + + + + ++ F +C
Sbjct: 75 LREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICR 134
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
A+ + G GG I+N+++ KAA+ S+T+ + ++
Sbjct: 135 AAIPLMAAAG--------GGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMGMDHAP 186
Query: 190 DYAIRVNGIAPGPI-----KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
IR+N + P + + P+ ++ + + E DIA L+LA
Sbjct: 187 Q-GIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLA 245
Query: 245 SDAGKYVNGNTLIVDGG 261
SDA +Y+ G+ + V+GG
Sbjct: 246 SDAARYLCGSLVEVNGG 262
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277 | Back alignment and structure |
|---|
Score = 185 bits (472), Expect = 1e-57
Identities = 61/258 (23%), Positives = 99/258 (38%), Gaps = 19/258 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GKVA++TG G+GIG ++ +L G + +A + G A D
Sbjct: 27 LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GCGAAACRVD 83
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + + +V++ + FG +D LV A L D + F VI I+ G ++
Sbjct: 84 VSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTK 143
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
A + + G GG I+N+S+ A +KA + ++R A E
Sbjct: 144 HAAPRMIERG--------GGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELR- 194
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK------FGEKWDIAMAALYL 243
IR N + P + DT + + ++A ++L
Sbjct: 195 SSGIRSNTLLPAFV-DTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFL 253
Query: 244 ASDAGKYVNGNTLIVDGG 261
SD + G T I DGG
Sbjct: 254 LSDDASMITGTTQIADGG 271
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281 | Back alignment and structure |
|---|
Score = 185 bits (472), Expect = 1e-57
Identities = 63/255 (24%), Positives = 110/255 (43%), Gaps = 13/255 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH-SLGIPAIGLEG 68
+G++AL+TGGG+G+G I+ L G ++ I GRR VL +A + G +
Sbjct: 31 GEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVC 90
Query: 69 DVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
DV + + + F +LD+LV NA + VP E+++ + ++ + G F+
Sbjct: 91 DVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLC 150
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
A + +K GG IIN + T +A K A+ +T+S AL+
Sbjct: 151 TQHAFRMMKAQTPR------GGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALDG 204
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD- 246
+ I I G T ++++ +++ +AA IA A +Y+AS
Sbjct: 205 R-MHDIACGQIDIGNA-ATDMTARMSTGVLQANGE--VAAEPTIPIEHIAEAVVYMASLP 260
Query: 247 AGKYVNGNTLIVDGG 261
V T++
Sbjct: 261 LSANVLTMTVMATRM 275
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267 | Back alignment and structure |
|---|
Score = 184 bits (470), Expect = 2e-57
Identities = 76/258 (29%), Positives = 114/258 (44%), Gaps = 18/258 (6%)
Query: 10 LKGKVALLTG--GGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA--LHSLGIPAIG 65
LKGKV ++TG G G+G E + + GAA+AI + + GI A
Sbjct: 18 LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKA 77
Query: 66 LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 125
+ V E ++V+ + FG++D + A D S + V+++D GTF
Sbjct: 78 YKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTF 137
Query: 126 IMCHEALKYLKKGGRGQ--ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
+ K+ G G ++S G I N Q + AKA + RSL
Sbjct: 138 HCAKAVGHHFKERGTGSLVITASMSGHIANFPQ--------EQTSYNVAKAGCIHMARSL 189
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
A EW D+ RVN I+PG I DT +S P+E + + + G ++ A +Y
Sbjct: 190 ANEWR-DF-ARVNSISPGYI-DTG-LSDFVPKETQQLWHSMIPMGRDGLAKELKGAYVYF 245
Query: 244 ASDAGKYVNGNTLIVDGG 261
ASDA Y G L++DGG
Sbjct: 246 ASDASTYTTGADLLIDGG 263
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 183 bits (468), Expect = 3e-57
Identities = 70/262 (26%), Positives = 113/262 (43%), Gaps = 20/262 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP--AIGLE 67
+V L+TGGGSG+G +++L GA ++++ L ++ AA+ +
Sbjct: 11 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTV 70
Query: 68 GDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
DV V +T FG++D NA P E + F V+ I+ G F+
Sbjct: 71 ADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFL 130
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
+ LK +++ G G+++N ++ Q +AAK V +TR+ A+E
Sbjct: 131 GLEKVLKIMREQG--------SGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVE 182
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-------FGEKWDIAMA 239
+G Y IR+N IAPG I T V + + +GE +IA
Sbjct: 183 YG-RYGIRINAIAPGAI-WTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAV 240
Query: 240 ALYLASDAGKYVNGNTLIVDGG 261
+L SD YVN + +DGG
Sbjct: 241 VAFLLSDDASYVNATVVPIDGG 262
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281 | Back alignment and structure |
|---|
Score = 183 bits (468), Expect = 6e-57
Identities = 62/266 (23%), Positives = 100/266 (37%), Gaps = 28/266 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L G+VAL+TGG SG+G + + GA +A++ + LR A G A+G+ GD
Sbjct: 3 LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVA---HGGNAVGVVGD 59
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAA-----AGNFLVPAEDLSPNGFRTVIEIDSVGT 124
VR +D R E + FGK+D L+ A + ED F + ++ G
Sbjct: 60 VRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGY 119
Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
L L G ++ + + +A K AV + R +A
Sbjct: 120 IHAVKACLPALVSS---------RGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMA 170
Query: 185 LEWGTDYAIRVNGIAPGPIK----DTAGVSKLAPEEIRSKATDYMAAY----KFGEKWDI 236
E +RVNG+APG + + + D + + + +
Sbjct: 171 FELAPH--VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEY 228
Query: 237 AMAALYLASD-AGKYVNGNTLIVDGG 261
A ++ A+ G L DGG
Sbjct: 229 TGAYVFFATRGDSLPATGALLNYDGG 254
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244 | Back alignment and structure |
|---|
Score = 181 bits (463), Expect = 1e-56
Identities = 43/256 (16%), Positives = 81/256 (31%), Gaps = 23/256 (8%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
+AL+T G L + G + G
Sbjct: 2 VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFE----SENPG--TIALA 55
Query: 73 REDAVRVVESTINHFGKLDILVNAAA---GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ R+V++T+ H +D +V+ +P E S R + E S+ ++
Sbjct: 56 EQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQ 115
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
A+ L+ G G +I I++++ Y A+AA ++ S A
Sbjct: 116 SAIAPLRAAG--------GASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSR 167
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLA----PEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
I + I P + + E+R + + + G ++ +LAS
Sbjct: 168 -DGILLYAIGPNFF-NNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFLAS 225
Query: 246 DAGKYVNGNTLIVDGG 261
+ G GG
Sbjct: 226 RRAAPIVGQFFAFTGG 241
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252 | Back alignment and structure |
|---|
Score = 181 bits (463), Expect = 1e-56
Identities = 58/265 (21%), Positives = 109/265 (41%), Gaps = 24/265 (9%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
M K D+L ++ L+TG GIG E ++ ++GA + ++GR + LR + ++
Sbjct: 1 MHYQPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET 60
Query: 61 IPA---IGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTV 116
L+ E+ ++ + ++ +LD ++ NA + P + +P ++ V
Sbjct: 61 GRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDV 120
Query: 117 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 176
++++ TF++ L L K G ++ S+++ +A+K A
Sbjct: 121 MQVNVNATFMLTQALLPLLLKSD--------AGSLVFTSSSVGRQGRANWGAYAASKFAT 172
Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
+ + + LA E+ +RVN I PG TA + P E K DI
Sbjct: 173 EGMMQVLADEYQQR--LRVNCINPGGT-RTAMRASAFPTED---------PQKLKTPADI 220
Query: 237 AMAALYLASDAGKYVNGNTLIVDGG 261
L+L D + G T G
Sbjct: 221 MPLYLWLMGDDSRRKTGMTFDAQPG 245
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272 | Back alignment and structure |
|---|
Score = 182 bits (464), Expect = 2e-56
Identities = 72/256 (28%), Positives = 120/256 (46%), Gaps = 12/256 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEG 68
V L+TGG GIG + + G + + + + VAA+ G A+ + G
Sbjct: 24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPG 83
Query: 69 DVRKREDAVRVVESTINHFGKLDILVN-AAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
DV D + + FG+LD LVN A ++ +++S ++ ++ G+ +
Sbjct: 84 DVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILC 143
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINIS--ATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
EA++ + + GQ GG I+N+S A + +AT Y + +A+KAA+D+ T LA
Sbjct: 144 AAEAVRRMSRLYSGQ-----GGAIVNVSSMAAILGSATQY-VDYAASKAAIDTFTIGLAR 197
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
E IRVN + PG I +T + + + + + G ++A A LYL S
Sbjct: 198 EVA-AEGIRVNAVRPGII-ETDLHASGGLPDRAREMAPSVPMQRAGMPEEVADAILYLLS 255
Query: 246 DAGKYVNGNTLIVDGG 261
+ YV G+ L V GG
Sbjct: 256 PSASYVTGSILNVSGG 271
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260 | Back alignment and structure |
|---|
Score = 181 bits (463), Expect = 2e-56
Identities = 73/252 (28%), Positives = 113/252 (44%), Gaps = 19/252 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GKVAL++GG G+G + GA + ++ A L A + D
Sbjct: 5 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL---ADAARYVHLD 61
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + V++ + FG L +LVN A + ED + ++ +++++ G F+
Sbjct: 62 VTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIR 121
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+K +K+ G G IINIS+ T +A K AV +T+S ALE G
Sbjct: 122 AVVKPMKEAG--------RGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELG- 172
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK 249
IRVN I PG + T + PE+I A + + E +++ +YLASD
Sbjct: 173 PSGIRVNSIHPGLV-KTPMTDWV-PEDIFQTA---LG--RAAEPVEVSNLVVYLASDESS 225
Query: 250 YVNGNTLIVDGG 261
Y G +VDGG
Sbjct: 226 YSTGAEFVVDGG 237
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263 | Back alignment and structure |
|---|
Score = 181 bits (462), Expect = 3e-56
Identities = 71/263 (26%), Positives = 115/263 (43%), Gaps = 17/263 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GK L+TG SGIG + GA++ + R + +L AVAA L AI + D
Sbjct: 4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAA---LEAEAIAVVAD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + V + FG+L + + A + +L + V+ ++ G+F++
Sbjct: 61 VSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVAR 120
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+A + L++GG ++ + + H +A K V + R+LALE
Sbjct: 121 KAGEVLEEGGS----------LVLTGSVAG-LGAFGLAHYAAGKLGVVGLARTLALELAR 169
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK 249
+RVN + PG I T + L P + + G ++A AAL+L S+
Sbjct: 170 -KGVRVNVLLPGLI-QTPMTAGL-PPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESA 226
Query: 250 YVNGNTLIVDGGNWLSNPRDLPK 272
Y+ G L VDGG + P LP
Sbjct: 227 YITGQALYVDGGRSIVGPPGLPP 249
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274 | Back alignment and structure |
|---|
Score = 182 bits (463), Expect = 3e-56
Identities = 70/265 (26%), Positives = 120/265 (45%), Gaps = 24/265 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEG 68
L GKVAL TG G GIG I+++LG+ GA++ + G VA L LG + ++
Sbjct: 19 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQA 78
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
D+ K + V + + ++HFG LD +++ + +++ F V +++ G F +
Sbjct: 79 DISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVA 138
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATL-HYTATWYQIHVSAAKAAVDSITRSLALEW 187
+ LK+ ++GGR II S+ T + +KAAV+ R+ A++
Sbjct: 139 QQGLKHCRRGGR----------IILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDC 188
Query: 188 GTDYAIRVNGIAPGPIK-----------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
G + VN IAPG +K G + E+I + + G DI
Sbjct: 189 G-AKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADI 247
Query: 237 AMAALYLASDAGKYVNGNTLIVDGG 261
A L + +++NG + + GG
Sbjct: 248 GRAVSALCQEESEWINGQVIKLTGG 272
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270 | Back alignment and structure |
|---|
Score = 181 bits (462), Expect = 3e-56
Identities = 74/264 (28%), Positives = 122/264 (46%), Gaps = 23/264 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEG 68
L GKVAL+TG G GIG +++ LG+ GA + + V+ + +LG AI ++
Sbjct: 16 LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKA 75
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
D+R+ + V++ + + HFG LDI V+ + +D++ F V +++ G F +
Sbjct: 76 DIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVA 135
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-YQIHVSAAKAAVDSITRSLALEW 187
EA ++L +GGR I+ S+ + S +K AVDS R + +
Sbjct: 136 REAYRHLTEGGR----------IVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDC 185
Query: 188 GTDYAIRVNGIAPGPIK----------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA 237
G D I VN +APG + E+ + A ++ G D+A
Sbjct: 186 G-DKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVA 244
Query: 238 MAALYLASDAGKYVNGNTLIVDGG 261
+L S G++VNG L +DGG
Sbjct: 245 NVVGFLVSKEGEWVNGKVLTLDGG 268
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269 | Back alignment and structure |
|---|
Score = 181 bits (462), Expect = 3e-56
Identities = 69/262 (26%), Positives = 109/262 (41%), Gaps = 31/262 (11%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
KVA++TGG SGIG + L ++GA + + + + D
Sbjct: 12 FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFK----------ID 61
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V E+ VE T +G++DILVN A P +R +I+++ G+++M
Sbjct: 62 VTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAK 121
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ + G G IINI++ Y AT +K A+ +TRS+A+++
Sbjct: 122 YTIPVMLAIG--------HGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP 173
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK----------FGEKWDIAMA 239
IR N + PG I T V K A E+ + G ++A
Sbjct: 174 K--IRCNAVCPGTI-MTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEV 230
Query: 240 ALYLASDAGKYVNGNTLIVDGG 261
+LASD ++ G L VDGG
Sbjct: 231 VAFLASDRSSFITGACLTVDGG 252
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254 | Back alignment and structure |
|---|
Score = 180 bits (460), Expect = 4e-56
Identities = 75/253 (29%), Positives = 103/253 (40%), Gaps = 15/253 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GK ++TGG G+G E + Q GA + + + L G A D
Sbjct: 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLD 59
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V ED RVV FG +D LVN A + + E S FR V+EI+ G FI
Sbjct: 60 VTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMK 119
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ +K G GG I+NIS+ A+K V +++ A+E G
Sbjct: 120 TVIPAMKDAG--------GGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELG- 170
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEK-WDIAMAALYLASDAG 248
IRVN + PG T ++ + G + +IA A + L SD
Sbjct: 171 TDRIRVNSVHPGMT-YTPMTAET-GIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTS 228
Query: 249 KYVNGNTLIVDGG 261
YV G L VDGG
Sbjct: 229 SYVTGAELAVDGG 241
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283 | Back alignment and structure |
|---|
Score = 181 bits (461), Expect = 6e-56
Identities = 81/265 (30%), Positives = 125/265 (47%), Gaps = 24/265 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEG 68
L+GKVAL+TG G GIG E++++LG+ G + + VAA+ G A ++
Sbjct: 27 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKA 86
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
+V ED VR+ E + FGKLDI+ + + +D++P F V I++ G F +
Sbjct: 87 NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVA 146
Query: 129 HEALKYLKKGGRGQASSSSGGIIINI-SATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
EA K+L+ GGR +I + S T A S +K A+++ R +A++
Sbjct: 147 REAYKHLEIGGR----------LILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDM 196
Query: 188 GTDYAIRVNGIAPGPIK-----------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
D I VN +APG IK G + E A + + G DI
Sbjct: 197 A-DKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDI 255
Query: 237 AMAALYLASDAGKYVNGNTLIVDGG 261
A +LAS+ G +V G + +DGG
Sbjct: 256 ARVVCFLASNDGGWVTGKVIGIDGG 280
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271 | Back alignment and structure |
|---|
Score = 180 bits (459), Expect = 1e-55
Identities = 78/254 (30%), Positives = 116/254 (45%), Gaps = 16/254 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEG 68
L GK A +TGG GIG I+ +L GAA+A+ ++ V+ + G A+ +
Sbjct: 29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRA 88
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
D R E + + T+ G LDILVN+A P E+ + F V+ ++ F+
Sbjct: 89 DNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAI 148
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-YQIHVSAAKAAVDSITRSLALEW 187
A ++L GGR II I + L W SA+KAA+ +T+ LA +
Sbjct: 149 RSASRHLGDGGR----------IITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDL 198
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
G I VN + PG DT + + +A +GE DIA +LA
Sbjct: 199 GP-RGITVNIVHPGST-DTDMNPAD--GDHAEAQRERIATGSYGEPQDIAGLVAWLAGPQ 254
Query: 248 GKYVNGNTLIVDGG 261
GK+V G +L +DGG
Sbjct: 255 GKFVTGASLTIDGG 268
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239 | Back alignment and structure |
|---|
Score = 178 bits (454), Expect = 2e-55
Identities = 71/256 (27%), Positives = 117/256 (45%), Gaps = 23/256 (8%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
+ AL+TGG GIG I+ L G +AI R ++ A+ L D+
Sbjct: 3 RKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLGAV--------PLPTDLE- 53
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
++D +V+ + G L +LV+AAA N PA +LS +R V+ + F++ A
Sbjct: 54 KDDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAA 113
Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWY--QIHVSAAKAAVDSITRSLALEWGTD 190
++ + G G+ ++ I + +TA + AK A+ +TR+LA EW
Sbjct: 114 PHMAEAGWGR--------VLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWA-R 164
Query: 191 YAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK 249
IRVN + PG + +T L E+ T + ++ +IA A L D +
Sbjct: 165 LGIRVNLLCPGYV-ETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDEAE 223
Query: 250 YVNGNTLIVDGGNWLS 265
Y+ G + VDGG +L+
Sbjct: 224 YLTGQAVAVDGG-FLA 238
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278 | Back alignment and structure |
|---|
Score = 178 bits (454), Expect = 6e-55
Identities = 72/265 (27%), Positives = 116/265 (43%), Gaps = 18/265 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+ KVA++TGG GIG + ++GA + I + + S + + D
Sbjct: 14 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDV-ISFVHCD 72
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAA--AGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
V K ED +V++TI GKLDI+ + F+ V++I+ G F++
Sbjct: 73 VTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLV 132
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV-SAAKAAVDSITRSLALE 186
A + + G I+ ++ +TA HV +A K AV +T SL E
Sbjct: 133 AKHAARVMIPAK--------KGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTE 184
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY----KFGEKWDIAMAALY 242
G +Y IRVN ++P + + ++ + + A D+A A Y
Sbjct: 185 LG-EYGIRVNCVSPYIV-ASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAY 242
Query: 243 LASDAGKYVNGNTLIVDGGNWLSNP 267
LA D KYV+G L++DGG +NP
Sbjct: 243 LAGDESKYVSGLNLVIDGGYTRTNP 267
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244 | Back alignment and structure |
|---|
Score = 177 bits (451), Expect = 7e-55
Identities = 48/261 (18%), Positives = 95/261 (36%), Gaps = 31/261 (11%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+TGG GIG + L ++ I + + ++ D
Sbjct: 2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENL---------KFIKAD 52
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ K++D V++ D + A D+ + V++++ +
Sbjct: 53 LTKQQDITNVLDII--KNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIK 110
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
LK G I+ + + A + +K A+ +T+SLAL+
Sbjct: 111 GLENNLKVGAS----------IVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLA- 159
Query: 190 DYAIRVNGIAPGPI---------KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
Y IRVN + PG + + A ++ +E + + + + +IA
Sbjct: 160 KYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELV 219
Query: 241 LYLASDAGKYVNGNTLIVDGG 261
++L SD K++ G + +DGG
Sbjct: 220 IFLLSDKSKFMTGGLIPIDGG 240
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264 | Back alignment and structure |
|---|
Score = 177 bits (451), Expect = 1e-54
Identities = 60/262 (22%), Positives = 102/262 (38%), Gaps = 32/262 (12%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+ KV ++TG GIG I+ + G+ + + +E D
Sbjct: 6 LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHD-----------PGEAKYDHIECD 54
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + ++ +G + +LVN A E +S +R +I+++ G +
Sbjct: 55 VTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASK 114
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
A+ Y+ + I+NIS+ T +K AV +T+S+AL++
Sbjct: 115 FAIPYMIRSR--------DPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAP 166
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK----------FGEKWDIAMA 239
+R N + P I DT V K A E+ S G+ ++A A
Sbjct: 167 L--LRCNAVCPATI-DTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASA 223
Query: 240 ALYLASDAGKYVNGNTLIVDGG 261
+LAS ++ G L VDGG
Sbjct: 224 VAFLASREASFITGTCLYVDGG 245
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247 | Back alignment and structure |
|---|
Score = 176 bits (448), Expect = 2e-54
Identities = 62/253 (24%), Positives = 99/253 (39%), Gaps = 22/253 (8%)
Query: 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA---I 64
++LKG+V L+TG GIG + HGA++ ++GR + L + S G P I
Sbjct: 10 ELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLII 69
Query: 65 GLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
L + + + + FG+LD L+ NA+ P E L F V+ ++
Sbjct: 70 ALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNA 129
Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
TF++ L LK+ I S+++ +K A + + ++L
Sbjct: 130 TFMLTRALLPLLKRSE--------DASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQTL 181
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
A E A+R N I PG T ++ P+E DI LYL
Sbjct: 182 ADELEGVTAVRANSINPGAT-RTGMRAQAYPDEN---------PLNNPAPEDIMPVYLYL 231
Query: 244 ASDAGKYVNGNTL 256
+NG L
Sbjct: 232 MGPDSTGINGQAL 244
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255 | Back alignment and structure |
|---|
Score = 175 bits (447), Expect = 4e-54
Identities = 68/261 (26%), Positives = 101/261 (38%), Gaps = 20/261 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LKGK AL+TG SGIG I+ L + GA I + G A+A + G+ A+ D
Sbjct: 2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHHPAD 59
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ + FG +DILVN A + P E + +I ++ F
Sbjct: 60 LSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTR 119
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
AL ++ G IINI++ + + AAK V +T+ + LE T
Sbjct: 120 LALPGMRARN--------WGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETAT 171
Query: 190 DYAIRVNGIAPGPIK---------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
+ N I PG + D A + + + F +
Sbjct: 172 -SNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELV 230
Query: 241 LYLASDAGKYVNGNTLIVDGG 261
L+L S+AG V G VDGG
Sbjct: 231 LFLCSEAGSQVRGAAWNVDGG 251
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277 | Back alignment and structure |
|---|
Score = 176 bits (449), Expect = 4e-54
Identities = 72/273 (26%), Positives = 112/273 (41%), Gaps = 29/273 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-------------GRRKTVLRSAVAAL 56
L+G+VA +TG G G ++++ GA I + L V +
Sbjct: 9 LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLV 68
Query: 57 HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV 116
+ + D R + +VV+ + G+LDI+V A +D++P FR V
Sbjct: 69 EAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDV 128
Query: 117 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 176
++I+ GT+ + +GGRG G II IS+ + IH +A+K AV
Sbjct: 129 MDINVTGTWNTVMAGAPRIIEGGRG-------GSIILISSAAGMKMQPFMIHYTASKHAV 181
Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPI--------KDTAGVSKLAPEEIRSKATDYMAAY 228
+ R+ A E G ++IRVN + PGP+ TA + S
Sbjct: 182 TGLARAFAAELGK-HSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPD 240
Query: 229 KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 261
E DIA +LASD + V + VD G
Sbjct: 241 WVAEPEDIADTVCWLASDESRKVTAAQIPVDQG 273
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272 | Back alignment and structure |
|---|
Score = 176 bits (448), Expect = 4e-54
Identities = 63/249 (25%), Positives = 112/249 (44%), Gaps = 15/249 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
K+A++TG GSG+G +++ L G +A+ GRR L+ A +G A+ + D
Sbjct: 26 TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAE---IGDDALCVPTD 82
Query: 70 VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
V + + +T+ FG++D+L NA G +P EDL+ ++ V++ + G F+
Sbjct: 83 VTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCT 142
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
EA + +K GG IIN + + Y +A K A+ +T+S +L+
Sbjct: 143 QEAFRVMKAQEPR------GGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDGR 196
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD-A 247
+ I I G DT K+ ++ + + + +A A +Y+AS
Sbjct: 197 -VHDIACGQIDIGNA-DTPMAQKMKAGVPQADLSIKVE--PVMDVAHVASAVVYMASLPL 252
Query: 248 GKYVNGNTL 256
V T+
Sbjct: 253 DANVQFMTI 261
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286 | Back alignment and structure |
|---|
Score = 176 bits (448), Expect = 6e-54
Identities = 70/282 (24%), Positives = 111/282 (39%), Gaps = 38/282 (13%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM----------------GRRKTVLRSAV 53
++GKVA +TG G G +++L + GA I + L
Sbjct: 9 VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETA 68
Query: 54 AALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNG 112
+ + E DVR + V+S + G+LDI+V NA GN + S
Sbjct: 69 DLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEED 128
Query: 113 FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 172
+ +I+I+ G + + ++ GGR GG II S+ A + H AA
Sbjct: 129 WTEMIDINLAGVWKTVKAGVPHMIAGGR-------GGSIILTSSVGGLKAYPHTGHYVAA 181
Query: 173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPI-----KDTAGVSKLAPEEIRSKATDYMAA 227
K V + R+ +E G + IRVN + P + + P+ D
Sbjct: 182 KHGVVGLMRAFGVELGQ-HMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPI 240
Query: 228 YK--------FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 261
+ + E DI+ A L+ ASD +Y+ G TL +D G
Sbjct: 241 CQMFHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAG 282
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294 | Back alignment and structure |
|---|
Score = 176 bits (449), Expect = 7e-54
Identities = 74/259 (28%), Positives = 115/259 (44%), Gaps = 16/259 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAALHSLGIPAIGLE 67
LK + AL+TGG SGIG ++ + GA +AI + + + A + G A+ L
Sbjct: 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLP 106
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA-EDLSPNGFRTVIEIDSVGTFI 126
GD+ A +V G LDIL A +P +DL+ F+ ++ F
Sbjct: 107 GDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFW 166
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
+ EA+ L KG II S+ Y + + + +A KAA+ + +R LA +
Sbjct: 167 ITQEAIPLLPKGAS----------IITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQ 216
Query: 187 WGTDYAIRVNGIAPGPIKDTAG-VSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
+ IRVN +APGPI TA +S ++ + + G+ ++A +YLAS
Sbjct: 217 VA-EKGIRVNIVAPGPI-WTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLAS 274
Query: 246 DAGKYVNGNTLIVDGGNWL 264
YV V GG L
Sbjct: 275 QESSYVTAEVHGVCGGEHL 293
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280 | Back alignment and structure |
|---|
Score = 175 bits (446), Expect = 9e-54
Identities = 64/255 (25%), Positives = 103/255 (40%), Gaps = 10/255 (3%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEG 68
VA++TGG GIG I+ L G IAI G + +A L LG I L
Sbjct: 27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRA 86
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAA--AGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
D+ V++ + FG++D LVN A A DL P F T++ ++ GT
Sbjct: 87 DLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVF 146
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
LK + IINI++ + ++ +KA + + ++ LAL
Sbjct: 147 FTQAVLKAMLASDARA-----SRSIINITSVSAVMTSPERLDYCMSKAGLAAFSQGLALR 201
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
I V + PG I + + ++ + + + ++GE DI LA
Sbjct: 202 LAE-TGIAVFEVRPGII-RSDMTAAVSGKYDGLIESGLVPMRRWGEPEDIGNIVAGLAGG 259
Query: 247 AGKYVNGNTLIVDGG 261
+ G+ + DGG
Sbjct: 260 QFGFATGSVIQADGG 274
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346 | Back alignment and structure |
|---|
Score = 176 bits (448), Expect = 2e-53
Identities = 68/261 (26%), Positives = 103/261 (39%), Gaps = 31/261 (11%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-------VLRSAVAALHSLGIP 62
L G +TG GIG I+L+ K GA I I + + +A + ++G
Sbjct: 43 LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGK 102
Query: 63 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 122
A+ DVR + VE I FG +DILVN A+ L D ++ +++
Sbjct: 103 ALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTR 162
Query: 123 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV--SAAKAAVDSIT 180
GT++ + YLKK I+NIS L+ W++ H + AK +
Sbjct: 163 GTYLASKACIPYLKKSK--------VAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYV 214
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI-AMA 239
+A E+ + I VN + P TA + L I K DI A A
Sbjct: 215 LGMAEEFKGE--IAVNALWPKTAIHTAAMDMLGGPGIE----------SQCRKVDIIADA 262
Query: 240 ALYLASDAGKYVNGNTLIVDG 260
A + K GN +I +
Sbjct: 263 AYSIFQKP-KSFTGNFVIDEN 282
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280 | Back alignment and structure |
|---|
Score = 174 bits (443), Expect = 3e-53
Identities = 65/272 (23%), Positives = 107/272 (39%), Gaps = 28/272 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-------------GRRKTVLRSAVAAL 56
L+G+VA +TG G G +++L GA I L +
Sbjct: 13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLV 72
Query: 57 HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV 116
G A+ DVR +V + FG+LD++V A +L+ + TV
Sbjct: 73 EDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTV 132
Query: 117 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 176
I ++ GT+ + + + G G G I+ +S++ AT H SA+K +
Sbjct: 133 IGVNLTGTWRTLRATVPAMIEAGNG-------GSIVVVSSSAGLKATPGNGHYSASKHGL 185
Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPIK-------DTAGVSKLAPEEIRSKATDYMAAYK 229
++T +LA+E G Y IRVN I P ++ + P + S +
Sbjct: 186 TALTNTLAIELGE-YGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPNG 244
Query: 230 FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 261
F ++A +LA D + G + VD G
Sbjct: 245 FMTADEVADVVAWLAGDGSGTLTGTQIPVDKG 276
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262 | Back alignment and structure |
|---|
Score = 173 bits (441), Expect = 4e-53
Identities = 71/257 (27%), Positives = 108/257 (42%), Gaps = 19/257 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP-AIGLEG 68
L+G+ ++TGG GIG I+ + GA +A+ GR + + VA L LG IG++
Sbjct: 8 LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQT 67
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV R + + FG +D++ A P ++P + ++ GTF
Sbjct: 68 DVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAV 127
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY----QIHVSAAKAAVDSITRSLA 184
L L G G+ ++ S+ T H A KAA R+ A
Sbjct: 128 QACLDALIASGSGR--------VVLTSSI---TGPITGYPGWSHYGATKAAQLGFMRTAA 176
Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
+E + I VN I PG I T G+ + EE + + A G DI A +LA
Sbjct: 177 IELAP-HKITVNAIMPGNI-MTEGLLEN-GEEYIASMARSIPAGALGTPEDIGHLAAFLA 233
Query: 245 SDAGKYVNGNTLIVDGG 261
+ Y+ G + VDGG
Sbjct: 234 TKEAGYITGQAIAVDGG 250
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281 | Back alignment and structure |
|---|
Score = 173 bits (442), Expect = 4e-53
Identities = 70/265 (26%), Positives = 109/265 (41%), Gaps = 23/265 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL--HSLGIPAIGLE 67
+ K A++TG SGIG I+ L K GA I + G V +
Sbjct: 23 MMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHP 82
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
D+ K + ++ + FG DILVN A F+ ED + +I ++ +F
Sbjct: 83 ADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHT 142
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
A+ +KK G G IINI++ A+ ++ AAK + +T+++ALE
Sbjct: 143 IRGAIPPMKKKG--------WGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALEV 194
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-----------FGEKWDI 236
+ VN I PG + T V K P++ R++ F +
Sbjct: 195 AE-SGVTVNSICPGYV-LTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQV 252
Query: 237 AMAALYLASDAGKYVNGNTLIVDGG 261
A ALYLA D + G + +DGG
Sbjct: 253 ASLALYLAGDDAAQITGTHVSMDGG 277
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247 | Back alignment and structure |
|---|
Score = 172 bits (439), Expect = 5e-53
Identities = 71/256 (27%), Positives = 109/256 (42%), Gaps = 20/256 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GK AL+TG GIG I+ +L GA + + ++A A+ +G A + D
Sbjct: 4 LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAAS---IGKKARAIAAD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGTF 125
+ + G +DILVN A D+ + +R +I+++ GTF
Sbjct: 61 ISDPGSVKALFAEIQALTGGIDILVN-NASIVPFVAWD---DVDLDHWRKIIDVNLTGTF 116
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
I+ ++ G+ G +I+I++ + T AAK V TR+LA
Sbjct: 117 IVTRAGTDQMRAAGK-------AGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALAT 169
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
E G Y I N + PG I ++ GV E A G+ IA +LAS
Sbjct: 170 ELGK-YNITANAVTPGLI-ESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIADVVSFLAS 227
Query: 246 DAGKYVNGNTLIVDGG 261
D +++ G TL VD G
Sbjct: 228 DDARWITGQTLNVDAG 243
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260 | Back alignment and structure |
|---|
Score = 172 bits (439), Expect = 6e-53
Identities = 74/265 (27%), Positives = 115/265 (43%), Gaps = 21/265 (7%)
Query: 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA--LHSLGIPAIGL 66
+LKGKVA++TG SGIG I+ L GA I + G V A G+ +
Sbjct: 1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYD 60
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
D+ K E +V++ + G++DILVN A ED + ++ ++ F
Sbjct: 61 GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFH 120
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
AL ++KK G G+ IINI++ A+ + AAK V T+ ALE
Sbjct: 121 GTAAALPHMKKQGFGR--------IINIASAHGLVASANKSAYVAAKHGVVGFTKVTALE 172
Query: 187 WGTDYAIRVNGIAPGPIK---------DTAGVSKLAPEEIRSKA-TDYMAAYKFGEKWDI 236
I N I PG ++ A + + E + ++ + +F +
Sbjct: 173 TAG-QGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQL 231
Query: 237 AMAALYLASDAGKYVNGNTLIVDGG 261
A++LASDA + G T+ VDGG
Sbjct: 232 GGTAVFLASDAAAQITGTTVSVDGG 256
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287 | Back alignment and structure |
|---|
Score = 172 bits (439), Expect = 1e-52
Identities = 74/278 (26%), Positives = 103/278 (37%), Gaps = 29/278 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM------------GRRKTVLRSAVAALH 57
++ KV L+TGG G G +++L + GA I + L A +
Sbjct: 8 VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVE 67
Query: 58 SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVI 117
G A E DVR R R + + + FGKLD++V A L F
Sbjct: 68 KTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAG--ICPLGAHLPVQAFADAF 125
Query: 118 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIHVSAAKAAV 176
++D VG H AL YL G + S G+I S AK V
Sbjct: 126 DVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLV 185
Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPI-----KDTAGVSKLAPEEIRSKATDYMAAY--- 228
DS T LA + +IR N I P + + P+ D + A+
Sbjct: 186 DSYTLQLAAQLA-PQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAM 244
Query: 229 -----KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 261
+ E DI+ A +LASD +YV G VD G
Sbjct: 245 QAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAG 282
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 171 bits (436), Expect = 2e-52
Identities = 68/264 (25%), Positives = 109/264 (41%), Gaps = 30/264 (11%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLE 67
+ GKVAL+TG GIG + L GA +A++ AALH + ++
Sbjct: 5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQ 64
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
DV ++ ++HFG+LDILVN A + ++ + ++I+ V
Sbjct: 65 CDVADQQQLRDTFRKVVDHFGRLDILVNNAG---VNNEKN-----WEKTLQINLVSVISG 116
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
+ L Y+ K G GGIIIN+S+ Q A+K + TRS AL
Sbjct: 117 TYLGLDYMSKQNGG-----EGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALA- 170
Query: 188 GTDYA---IRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-------FGEKWDIA 237
+ +R+N I PG + +TA + + EE + +Y K + IA
Sbjct: 171 -ANLMNSGVRLNAICPGFV-NTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIA 228
Query: 238 MAALYLASDAGKYVNGNTLIVDGG 261
+ L D +NG + +
Sbjct: 229 NGLITLIED--DALNGAIMKITTS 250
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246 | Back alignment and structure |
|---|
Score = 171 bits (435), Expect = 2e-52
Identities = 69/258 (26%), Positives = 107/258 (41%), Gaps = 25/258 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GKV +LT GIG +L + GA + ++ L+ GI L D
Sbjct: 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYP---GIQTRVL--D 58
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V K++ ++ N +LD+L N A D + + ++ ++M
Sbjct: 59 VTKKKQ----IDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIK 114
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIHVSAAKAAVDSITRSLALEWG 188
L + G IIN+S+ + S KAAV +T+S+A ++
Sbjct: 115 AFLPKMLAQK--------SGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFI 166
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
IR N + PG + DT + + PEE R+ +F +IAM +YL
Sbjct: 167 QQ-GIRCNCVCPGTV-DTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYL 224
Query: 244 ASDAGKYVNGNTLIVDGG 261
ASD YV GN +I+DGG
Sbjct: 225 ASDESAYVTGNPVIIDGG 242
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260 | Back alignment and structure |
|---|
Score = 170 bits (434), Expect = 3e-52
Identities = 55/252 (21%), Positives = 92/252 (36%), Gaps = 22/252 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L L+TG +G +L+L +HG + I R + ++V L G A+ L GD
Sbjct: 25 LSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTE---HASVTELRQAG--AVALYGD 79
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ ++ L +V+ A +L + F + + + +++
Sbjct: 80 FSCETGIMAFIDLLKTQTSSLRAVVH-NASEWLAETPGEEADNFTRMFSVHMLAPYLINL 138
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
L I++IS + + I A KA ++S+T S A +
Sbjct: 139 HCEPLLTASE--------VADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARFAP 190
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK 249
++VNGIAP + R+ A A I + YL
Sbjct: 191 L--VKVNGIAPALL-MFQP---KDDAAYRANALAKSALGIEPGAEVIYQSLRYLLD--ST 242
Query: 250 YVNGNTLIVDGG 261
YV G TL V+GG
Sbjct: 243 YVTGTTLTVNGG 254
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251 | Back alignment and structure |
|---|
Score = 170 bits (433), Expect = 4e-52
Identities = 46/257 (17%), Positives = 76/257 (29%), Gaps = 37/257 (14%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
K L+ GG +G E+ + R+
Sbjct: 20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA------------DHSFTIK 67
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAG-NFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
E+ V+E + K+D V AA G + + D + +I+++ F
Sbjct: 68 DSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASA 127
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
H K L +GG + A+ T I A KAA I + LA E G
Sbjct: 128 HIGAKLLNQGGL----------FVLTGASAALNRTSGMIAYGATKAATHHIIKDLASENG 177
Query: 189 TD-YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT--DYMAAYKFGEKWDIAMAALYLAS 245
GI P + DT K + T +A + +
Sbjct: 178 GLPAGSTSLGILPVTL-DTPTNRKYMSDANFDDWTPLSEVA----------EKLFEWSTN 226
Query: 246 DAGKYVNGNTLIVDGGN 262
+ NG+ + + +
Sbjct: 227 SDSRPTNGSLVKFETKS 243
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299 | Back alignment and structure |
|---|
Score = 172 bits (437), Expect = 5e-52
Identities = 70/278 (25%), Positives = 117/278 (42%), Gaps = 34/278 (12%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM------------GRRKTVLRSAVAALH 57
++GKVA +TG G G ++ L + GA I + L V +
Sbjct: 26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVE 85
Query: 58 SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTV 116
+LG I + DVR + V+ + G+LDI++ NAA + + P +R +
Sbjct: 86 ALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDM 145
Query: 117 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 176
I+++ G +I A+ ++ G RG G I+ S+ + A+K +
Sbjct: 146 IDVNLNGAWITARVAIPHIMAGKRG-------GSIVFTSSIGGLRGAENIGNYIASKHGL 198
Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPI-----KDTAGVSKLAPEEIRSKATDYMAAYK-- 229
+ R++ALE G IRVN + P + + P+ D+ A +
Sbjct: 199 HGLMRTMALELGP-RNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQM 257
Query: 230 ------FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 261
+ E DI+ A L+L SD +Y+ G +L VDGG
Sbjct: 258 HVLPIPYVEPADISNAILFLVSDDARYITGVSLPVDGG 295
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254 | Back alignment and structure |
|---|
Score = 169 bits (431), Expect = 8e-52
Identities = 53/262 (20%), Positives = 99/262 (37%), Gaps = 28/262 (10%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMG--RRKTVLRSAVAALHSLGIPAIGLEGD 69
GKV L+TG GIG I L + G R + L+ G + GD
Sbjct: 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY---GDRFFYVVGD 58
Query: 70 VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
+ + ++V + + GK+D LV NA + ++ N ++ + +I+ +
Sbjct: 59 ITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLV 118
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
AL LKK + G ++ +S+ ++KAA++ +LA E
Sbjct: 119 GIALPELKK---------TNGNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE-- 167
Query: 189 TDYAIRVNGIAPGPI--------KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
+ ++ +APG + ++ G S ++ E+++ + + A
Sbjct: 168 -ERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLK-MFRGLKENNQLLDSSVPATVY 225
Query: 241 LYLASDAG-KYVNGNTLIVDGG 261
LA VNG L +
Sbjct: 226 AKLALHGIPDGVNGQYLSYNDP 247
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279 | Back alignment and structure |
|---|
Score = 170 bits (433), Expect = 9e-52
Identities = 64/271 (23%), Positives = 107/271 (39%), Gaps = 24/271 (8%)
Query: 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA 63
P + + + A +TG SGIG ++ L G A+ R + +AV L + G
Sbjct: 16 PRGSHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDV 75
Query: 64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
G DV ++ V + + FG + ILVN+A N DL + V++ + G
Sbjct: 76 DGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTG 135
Query: 124 TFIMCHEALKYL----KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSI 179
F + E L+ GR I+NI++T Y +A+K V
Sbjct: 136 VFRVTREVLRAGGMREAGWGR----------IVNIASTGGKQGVMYAAPYTASKHGVVGF 185
Query: 180 TRSLALEWGTDYAIRVNGIAPGPI---------KDTAGVSKLAPEEIRSKATDYMAAYKF 230
T+S+ E I VN + PG + + A + +E+ + + ++
Sbjct: 186 TKSVGFELAK-TGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRY 244
Query: 231 GEKWDIAMAALYLASDAGKYVNGNTLIVDGG 261
++A YL +DA + L V GG
Sbjct: 245 STPEEVAGLVGYLVTDAAASITAQALNVCGG 275
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317 | Back alignment and structure |
|---|
Score = 171 bits (435), Expect = 1e-51
Identities = 69/277 (24%), Positives = 117/277 (42%), Gaps = 33/277 (11%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV------------LRSAVAALH 57
L+GKVA +TG G G +++L + GA I + + L+ V +
Sbjct: 44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVE 103
Query: 58 SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVI 117
G I + DVR VV+ + FG +DILV+ + L+ + ++
Sbjct: 104 EQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDIL 163
Query: 118 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVD 177
+ + +G + C L + + G+G G +I +S+T+ Q H +A+K V
Sbjct: 164 QTNLIGAWHACRAVLPSMIERGQG-------GSVIFVSSTVGLRGAPGQSHYAASKHGVQ 216
Query: 178 SITRSLALEWGTDYAIRVNGIAPGPI-----KDTAGVSKLAPEEIRSKATDYMAAYK--- 229
+ SLA E G + IRVN + PG + + + P D +
Sbjct: 217 GLMLSLANEVGR-HNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLT 275
Query: 230 -----FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 261
+ E D++ A +LASD +Y++G + VDGG
Sbjct: 276 LLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGG 312
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254 | Back alignment and structure |
|---|
Score = 167 bits (426), Expect = 5e-51
Identities = 44/256 (17%), Positives = 91/256 (35%), Gaps = 22/256 (8%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
A++T G +L+L + G +A A +
Sbjct: 2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFA------ETYPQLKPMS 55
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
++ ++E+ + +G++D+LV+ P + + +R +E + F + +
Sbjct: 56 EQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAV 115
Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
+KK G II I++ + ++A+A ++ +L+ E G Y
Sbjct: 116 ASQMKKRKSGH--------IIFITSATPFGPWKELSTYTSARAGACTLANALSKELGE-Y 166
Query: 192 AIRVNGIAPGPIK--DTAGVSKL----APEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
I V I P + D+ E + A + G + ++ +LAS
Sbjct: 167 NIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLAS 226
Query: 246 DAGKYVNGNTLIVDGG 261
+ Y+ G + GG
Sbjct: 227 GSCDYLTGQVFWLAGG 242
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267 | Back alignment and structure |
|---|
Score = 167 bits (426), Expect = 6e-51
Identities = 66/268 (24%), Positives = 108/268 (40%), Gaps = 30/268 (11%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAI--GLE 67
LKGK AL+TG +GIG I+ L GA + I GRR+ + + + + AI +
Sbjct: 8 LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVV 67
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
D+ + V+E + K+DIL+N V D+ + + E++ + +
Sbjct: 68 ADLGTEQGCQDVIE----KYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRL 123
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
LK + + G+ +I I++ + H SA K S++RSLA
Sbjct: 124 TRSYLKKMIERKEGR--------VIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAELT 175
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK--------------FGEK 233
+ VN I PG T GV + ++ A K
Sbjct: 176 TG-TNVTVNTIMPGST-LTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRP 233
Query: 234 WDIAMAALYLASDAGKYVNGNTLIVDGG 261
+IA +L+S +NG+ L +DGG
Sbjct: 234 EEIAHLVTFLSSPLSSAINGSALRIDGG 261
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293 | Back alignment and structure |
|---|
Score = 168 bits (428), Expect = 6e-51
Identities = 72/261 (27%), Positives = 105/261 (40%), Gaps = 27/261 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-HSLGIPAIGLEG 68
L + L+TGG GIG I+ + GA +A+ R L S A L IG+
Sbjct: 39 LSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRL 98
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGT 124
DV + ++ FG LD++ AG L ++P V++++ GT
Sbjct: 99 DVSDPGSCADAARTVVDAFGALDVVCA-NAGIFPEARLD---TMTPEQLSEVLDVNVKGT 154
Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY----QIHVSAAKAAVDSIT 180
L L GRG+ +I S+ T H A+KAA
Sbjct: 155 VYTVQACLAPLTASGRGR--------VILTSSI---TGPVTGYPGWSHYGASKAAQLGFM 203
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
R+ A+E + VN I PG I T G+ + EE S + G DI A
Sbjct: 204 RTAAIELAP-RGVTVNAILPGNI-LTEGLVDM-GEEYISGMARSIPMGMLGSPVDIGHLA 260
Query: 241 LYLASDAGKYVNGNTLIVDGG 261
+LA+D Y+ G ++VDGG
Sbjct: 261 AFLATDEAGYITGQAIVVDGG 281
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276 | Back alignment and structure |
|---|
Score = 168 bits (427), Expect = 7e-51
Identities = 60/269 (22%), Positives = 105/269 (39%), Gaps = 24/269 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSL-GIPAIGLE 67
+ A++TGG IG I+++L + G + + R + + VA L++ A+ +
Sbjct: 9 SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCK 68
Query: 68 GDVRKREDAV----RVVESTINHFGKLDILVNAA-----------AGNFLVPAEDLSPNG 112
GD+ + +++ + FG+ D+LVN A
Sbjct: 69 GDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQ 128
Query: 113 FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 172
+ ++V + + +GG ++ + S ++N+ + + A
Sbjct: 129 VAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLS---VVNLCDAMTDLPLPGFCVYTMA 185
Query: 173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 232
K A+ +TR+ ALE IRVN +APG + + EE R K
Sbjct: 186 KHALGGLTRAAALELA-PRHIRVNAVAPGLSLLPPAMPQETQEEYRRKV---PLGQSEAS 241
Query: 233 KWDIAMAALYLASDAGKYVNGNTLIVDGG 261
IA A +L S Y+ G TL VDGG
Sbjct: 242 AAQIADAIAFLVSKDAGYITGTTLKVDGG 270
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264 | Back alignment and structure |
|---|
Score = 167 bits (425), Expect = 9e-51
Identities = 59/260 (22%), Positives = 104/260 (40%), Gaps = 22/260 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEG 68
+ AL+T G G+G +++ +L G ++ + T + + + ++
Sbjct: 5 RFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQA 64
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAG-----NFLVPAEDLSPNGFRTVIEIDSVG 123
DV K+ED ++VE ++HFGK+D L+N A LV D + + +I+ +
Sbjct: 65 DVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLV---DYEEDEWNEMIQGNLTA 121
Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISAT--LHYTATWYQIHVSAAKAAVDSITR 181
F + + ++K G+ IIN Y+ +AAK + S+T+
Sbjct: 122 VFHLLKLVVPVMRKQNFGR--------IINYGFQGADSAPGWIYRSAFAAAKVGLVSLTK 173
Query: 182 SLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241
++A E Y I N + PG I +E R + G DIA
Sbjct: 174 TVAYEEAE-YGITANMVCPGDI-IGEMKEAT-IQEARQLKEHNTPIGRSGTGEDIARTIS 230
Query: 242 YLASDAGKYVNGNTLIVDGG 261
+L D + G + V G
Sbjct: 231 FLCEDDSDMITGTIIEVTGA 250
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260 | Back alignment and structure |
|---|
Score = 166 bits (424), Expect = 1e-50
Identities = 62/264 (23%), Positives = 110/264 (41%), Gaps = 23/264 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLE 67
++GK+A++T G SG+GF +L+L ++GA + + R + L +A + + SL G +
Sbjct: 5 IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVA 64
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
GD+R+ D R+ E G DILV + G +L + + + +
Sbjct: 65 GDIREPGDIDRLFE-KARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWV 123
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
A + + + G G ++ I + + + V + R+LALE
Sbjct: 124 GRRAAEQMVEKG--------WGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALEL 175
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLA----------PEEIRSKATDYMAAYKFGEKWDIA 237
+ VN + P I T V LA EE + + G+ ++A
Sbjct: 176 APH-GVTVNAVLPSLI-LTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELA 233
Query: 238 MAALYLASDAGKYVNGNTLIVDGG 261
+LAS+ ++ G + VDGG
Sbjct: 234 SVVAFLASEKASFITGAVIPVDGG 257
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277 | Back alignment and structure |
|---|
Score = 167 bits (425), Expect = 1e-50
Identities = 70/268 (26%), Positives = 117/268 (43%), Gaps = 30/268 (11%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+VAL+TG SGIG EI+ +LGK G + + R + LR+ + L G+ A G D
Sbjct: 20 QDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCD 79
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAA---AGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
VR + +V + + +G +D+LVN A G +L+ + V+E + G F
Sbjct: 80 VRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATA---ELADELWLDVVETNLTGVFR 136
Query: 127 MCHEALKYL----KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 182
+ + LK + GR I+NI++T + SA+K V T++
Sbjct: 137 VTKQVLKAGGMLERGTGR----------IVNIASTGGKQGVVHAAPYSASKHGVVGFTKA 186
Query: 183 LALEWGTDYAIRVNGIAPGPI---------KDTAGVSKLAPEEIRSKATDYMAAYKFGEK 233
L LE I VN + PG + + + + +++ EE + T + ++ +
Sbjct: 187 LGLELAR-TGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQP 245
Query: 234 WDIAMAALYLASDAGKYVNGNTLIVDGG 261
++A YL V L V GG
Sbjct: 246 SEVAEMVAYLIGPGAAAVTAQALNVCGG 273
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260 | Back alignment and structure |
|---|
Score = 166 bits (422), Expect = 2e-50
Identities = 65/254 (25%), Positives = 104/254 (40%), Gaps = 27/254 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+ KV ++TG GIG + + R +A + GD
Sbjct: 26 NQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSR-----SIKPSA----DPDIHTVAGD 76
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ K E A R+V I FG++D LVN A P +++ + + ++ G F +
Sbjct: 77 ISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQ 136
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV--SAAKAAVDSITRSLALEW 187
A + K G G I++I+ +L S K ++++TRSLA+E+
Sbjct: 137 RAAAEMLKQG--------SGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTRSLAMEF 188
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
+RVN ++PG I T + P E S + GE D+ A LYL +
Sbjct: 189 S-RSGVRVNAVSPGVI-KTP----MHPAETHSTLAGLHPVGRMGEIRDVVDAVLYL--EH 240
Query: 248 GKYVNGNTLIVDGG 261
++ G L VDGG
Sbjct: 241 AGFITGEILHVDGG 254
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262 | Back alignment and structure |
|---|
Score = 166 bits (422), Expect = 3e-50
Identities = 59/249 (23%), Positives = 100/249 (40%), Gaps = 20/249 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L G+VA++TG GIG I+ +LG GA + + R LR+ + + G A D
Sbjct: 27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACD 86
Query: 70 VRKREDAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
+ + + G+ D+LV NA G F P + P + +I ++ +++
Sbjct: 87 LSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLL 146
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
+ RG IINIS+ +A+K ++ + S A E
Sbjct: 147 RAFAPAMIAAKRGH--------IINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELR 198
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
+ +RV+ +APG + T L+ ++ A E DIA LA+ A
Sbjct: 199 Q-HQVRVSLVAPGSV-RTEFGVGLSAKKSALGA---------IEPDDIADVVALLATQAD 247
Query: 249 KYVNGNTLI 257
+ L+
Sbjct: 248 QSFISEVLV 256
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291 | Back alignment and structure |
|---|
Score = 166 bits (424), Expect = 3e-50
Identities = 80/259 (30%), Positives = 118/259 (45%), Gaps = 24/259 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVL------RSAVAALHSLGIPA 63
LKGK L+TGG SGIG +S+ K GA IAI L + G+
Sbjct: 45 LKGKNVLITGGDSGIGRAVSIAFAKEGANIAI-----AYLDEEGDANETKQYVEKEGVKC 99
Query: 64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA-EDLSPNGFRTVIEIDSV 122
+ L GD+ + +V+ T+ G L+ILVN A + E ++ I+
Sbjct: 100 VLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIF 159
Query: 123 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 182
F + AL +LK+G IIN ++ + Y I SA K A+ + TRS
Sbjct: 160 SYFHVTKAALSHLKQGDV----------IINTASIVAYEGNETLIDYSATKGAIVAFTRS 209
Query: 183 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242
L+ IRVNG+APGPI T + E+ S+ + + G+ +++A A +Y
Sbjct: 210 LSQSLV-QKGIRVNGVAPGPI-WTPLIPSSFDEKKVSQFGSNVPMQRPGQPYELAPAYVY 267
Query: 243 LASDAGKYVNGNTLIVDGG 261
LAS YV G + V+GG
Sbjct: 268 LASSDSSYVTGQMIHVNGG 286
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235 | Back alignment and structure |
|---|
Score = 165 bits (419), Expect = 3e-50
Identities = 48/253 (18%), Positives = 97/253 (38%), Gaps = 25/253 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+ ++TG GSG+G +++ L + G +++MGRR L+ L G IG+ D
Sbjct: 1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL---GNAVIGIVAD 57
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ ED + + G +++++ A P + R V+E + V T ++
Sbjct: 58 LAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQ 117
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ ++ + + GG++ N+ ++ + A+K + SL E
Sbjct: 118 QTVRLIGER---------GGVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELK- 167
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY-LASDAG 248
D +R+ + P I + E + F D A L L + +
Sbjct: 168 DSPLRLVNLYPSGI-RS---------EFWDNTDHVDPS-GFMTPEDAAAYMLDALEARSS 216
Query: 249 KYVNGNTLIVDGG 261
+V + + G
Sbjct: 217 CHVTDLFIGRNEG 229
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278 | Back alignment and structure |
|---|
Score = 166 bits (422), Expect = 4e-50
Identities = 69/276 (25%), Positives = 108/276 (39%), Gaps = 36/276 (13%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM------------GRRKTVLRSAVAALH 57
L GKVA +TG G G +++L GA I + L + V +
Sbjct: 11 LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE 70
Query: 58 SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVI 117
+G + + DVR RE +++ ++ G+LDI+V A + +G+ VI
Sbjct: 71 DIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAG----IAPMSAGDDGWHDVI 126
Query: 118 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL----HYTATWYQIHVSAAK 173
+++ G + A+ L K G GG I+ IS++ +A + AAK
Sbjct: 127 DVNLTGVYHTIKVAIPTLVKQGT-------GGSIVLISSSAGLAGVGSADPGSVGYVAAK 179
Query: 174 AAVDSITRSLALEWGTDYAIRVNGIAPGPI-----KDTAGVSKLAPEEIRSKATDYMAAY 228
V + R A IRVN I P + + LA + M
Sbjct: 180 HGVVGLMRVYANLLAG-QMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNA 238
Query: 229 ---KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 261
+ D+A A +L SD +Y+ G TL VD G
Sbjct: 239 MPVEVLAPEDVANAVAWLVSDQARYITGVTLPVDAG 274
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255 | Back alignment and structure |
|---|
Score = 163 bits (416), Expect = 2e-49
Identities = 78/259 (30%), Positives = 115/259 (44%), Gaps = 18/259 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEG 68
LKGKVAL+TG GIG I+ +L GA +AI G RK V + S G A +
Sbjct: 5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGA 64
Query: 69 DVRKREDAVRVVESTINHF------GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 122
++ + S N K DIL+N A E+ + F ++ +++
Sbjct: 65 NLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAK 124
Query: 123 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 182
F + +AL L+ R IINIS+ + I S K A++++T +
Sbjct: 125 APFFIIQQALSRLRDNSR----------IINISSAATRISLPDFIAYSMTKGAINTMTFT 174
Query: 183 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242
LA + G I VN I PG +K L+ ++ AT A + GE DIA A +
Sbjct: 175 LAKQLG-ARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAF 233
Query: 243 LASDAGKYVNGNTLIVDGG 261
LAS ++V G + V GG
Sbjct: 234 LASPDSRWVTGQLIDVSGG 252
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 164 bits (417), Expect = 2e-49
Identities = 59/273 (21%), Positives = 107/273 (39%), Gaps = 24/273 (8%)
Query: 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA--LHSLGIPA 63
+G ++ A++TG IG I+++L + G + I ++A A
Sbjct: 17 RGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTA 76
Query: 64 IGLEGDVRKRE----DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS---------- 109
+ + D+ ++ S FG+ D+LVN A+ + P
Sbjct: 77 VVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTV 136
Query: 110 PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 169
+I +++ F++ + K +SS I+N+ +
Sbjct: 137 ETQVAELIGTNAIAPFLLTMSFAQRQKG--TNPNCTSSNLSIVNLCDAMVDQPCMAFSLY 194
Query: 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK 229
+ K A+ +T+S ALE Y IRVNG+APG + EE + K + +
Sbjct: 195 NMGKHALVGLTQSAALELA-PYGIRVNGVAPGVSLLPVAM----GEEEKDKWRRKVPLGR 249
Query: 230 F-GEKWDIAMAALYLASDAGKYVNGNTLIVDGG 261
IA A ++L S + +Y+ G+ + VDGG
Sbjct: 250 REASAEQIADAVIFLVSGSAQYITGSIIKVDGG 282
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250 | Back alignment and structure |
|---|
Score = 163 bits (414), Expect = 3e-49
Identities = 55/260 (21%), Positives = 98/260 (37%), Gaps = 27/260 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
GK +TG G GIG+ +L + GA + + A P D
Sbjct: 5 FSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQ----------AFTQEQYPFATEVMD 54
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V +V + + +LD LVNAA + + LS ++ ++ G F +
Sbjct: 55 VADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQ 114
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ + ++ GG I+ +++ +T A+KAA+ S+ S+ LE
Sbjct: 115 QTMNQFRRQR--------GGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAG 166
Query: 190 DYAIRVNGIAPGPIK--------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241
+R N ++PG + + + + K +IA L
Sbjct: 167 -SGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTIL 225
Query: 242 YLASDAGKYVNGNTLIVDGG 261
+LASD ++ ++VDGG
Sbjct: 226 FLASDLASHITLQDIVVDGG 245
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241 | Back alignment and structure |
|---|
Score = 159 bits (405), Expect = 4e-48
Identities = 41/255 (16%), Positives = 75/255 (29%), Gaps = 30/255 (11%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+ + L+ GG +G +A + + SA + +
Sbjct: 5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVI--------VKMTDS 56
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLV-PAEDLSPNGFRTVIEIDSVGTFIMC 128
++ D V + K+D ++ A G + + + I
Sbjct: 57 FTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISS 116
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW- 187
H A K+LK+GG + A T I AK AV + +SLA +
Sbjct: 117 HLATKHLKEGGL----------LTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNS 166
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
G + P + DT K PE S + + +
Sbjct: 167 GMPSGAAAIAVLPVTL-DTPMNRKSMPEADFS---------SWTPLEFLVETFHDWITGN 216
Query: 248 GKYVNGNTLIVDGGN 262
+ +G+ + V +
Sbjct: 217 KRPNSGSLIQVVTTD 231
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285 | Back alignment and structure |
|---|
Score = 160 bits (408), Expect = 5e-48
Identities = 79/258 (30%), Positives = 122/258 (47%), Gaps = 23/258 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+ KVAL+TG G GIG EI+ L K + + + R + S V + S G + G GD
Sbjct: 42 GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGD 101
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGTF 125
V K+E+ V+ + +DILVN AG N + + + + V+ + F
Sbjct: 102 VSKKEEISEVINKILTEHKNVDILVN-NAGITRDNLFL---RMKNDEWEDVLRTNLNSLF 157
Query: 126 IMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
+ K + + GR IINIS+ + T Q + S++KA V T+SL
Sbjct: 158 YITQPISKRMINNRYGR----------IINISSIVGLTGNVGQANYSSSKAGVIGFTKSL 207
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
A E + I VN IAPG I + K+ E+I+ + A + G ++A A +L
Sbjct: 208 AKELAS-RNITVNAIAPGFI-SSDMTDKI-SEQIKKNIISNIPAGRMGTPEEVANLACFL 264
Query: 244 ASDAGKYVNGNTLIVDGG 261
+SD Y+NG ++DGG
Sbjct: 265 SSDKSGYINGRVFVIDGG 282
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254 | Back alignment and structure |
|---|
Score = 159 bits (405), Expect = 7e-48
Identities = 49/255 (19%), Positives = 83/255 (32%), Gaps = 21/255 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEG 68
L K + GIG + S +L K ++ R + +
Sbjct: 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTY 62
Query: 69 DV-RKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
DV ++ ++++ + +DIL+N A ++ I I+ G
Sbjct: 63 DVTVPVAESKKLLKKIFDQLKTVDILINGAG---ILDDHQ-----IERTIAINFTGLVNT 114
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
L + K G GGII NI + + A SA+KAAV S T SLA
Sbjct: 115 TTAILDFWDKRKGG-----PGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLA 169
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
+ I PG T V + ++ + + + ++ +
Sbjct: 170 PI-TGVTAYSINPGIT-RTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEA 227
Query: 247 AGKYVNGNTLIVDGG 261
NG +D G
Sbjct: 228 N---KNGAIWKLDLG 239
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270 | Back alignment and structure |
|---|
Score = 159 bits (405), Expect = 1e-47
Identities = 79/258 (30%), Positives = 122/258 (47%), Gaps = 23/258 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L +VA++TG GIG I+L+L + GA + + AA G+ G +
Sbjct: 26 LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLN 85
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGTF 125
V +VEST+ FG L++LVN AG + + + + VI+ + F
Sbjct: 86 VNDATAVDALVESTLKEFGALNVLVN-NAGITQDQLAM---RMKDDEWDAVIDTNLKAVF 141
Query: 126 IMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
+ L+ + +GGR I+NI++ + Q++ +AAKA V +TR+L
Sbjct: 142 RLSRAVLRPMMKARGGR----------IVNITSVVGSAGNPGQVNYAAAKAGVAGMTRAL 191
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
A E G+ I VN +APG I DT L P+E ++ + + G DIA A +L
Sbjct: 192 AREIGS-RGITVNCVAPGFI-DTDMTKGL-PQEQQTALKTQIPLGRLGSPEDIAHAVAFL 248
Query: 244 ASDAGKYVNGNTLIVDGG 261
AS Y+ G TL V+GG
Sbjct: 249 ASPQAGYITGTTLHVNGG 266
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281 | Back alignment and structure |
|---|
Score = 159 bits (405), Expect = 2e-47
Identities = 64/277 (23%), Positives = 110/277 (39%), Gaps = 34/277 (12%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV------------LRSAVAALH 57
+GK AL+TGG G+G ++ L + GA IAI R + L VA +
Sbjct: 8 FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVE 67
Query: 58 SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVI 117
G I + DV+ R V + G +DI + A + + ++ + VI
Sbjct: 68 KTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVI 127
Query: 118 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVD 177
+ GTF + K G I+ +S+ L ++A + Q ++K V
Sbjct: 128 GTNLTGTFNTIAAVAPGMIKRN--------YGRIVTVSSMLGHSANFAQASYVSSKWGVI 179
Query: 178 SITRSLALEWGTDYAIRVNGIAPGPI-----KDTAGVSKLAPEEIRSKATDYMAAY---- 228
+T+ A + Y I VN +APG I + + P+ + D + +
Sbjct: 180 GLTKCAAHDLVG-YGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLH 238
Query: 229 ----KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 261
F + ++ A L+L +A ++ G L +D G
Sbjct: 239 LQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAG 275
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247 | Back alignment and structure |
|---|
Score = 158 bits (402), Expect = 2e-47
Identities = 73/259 (28%), Positives = 125/259 (48%), Gaps = 24/259 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEG 68
LKGK A++TG G+G I+ +LG GA I + G T L + + GI + +G
Sbjct: 3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKG 62
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGT 124
DV+ ED +V++ ++ FG++DILVN A G ++ +S + V+ +
Sbjct: 63 DVKNPEDVENMVKTAMDAFGRIDILVNNA-GITRDTLML---KMSEKDWDDVLNTNLKSA 118
Query: 125 FIMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 182
++ K + +K G+ IINI++ Q + +A+KA + T+S
Sbjct: 119 YLCTKAVSKIMLKQKSGK----------IINITSIAGIIGNAGQANYAASKAGLIGFTKS 168
Query: 183 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242
+A E+ I N +APG I T L P++++ + + +FG ++A +
Sbjct: 169 IAKEFAA-KGIYCNAVAPGII-KTDMTDVL-PDKVKEMYLNNIPLKRFGTPEEVANVVGF 225
Query: 243 LASDAGKYVNGNTLIVDGG 261
LASD Y+ G + +DGG
Sbjct: 226 LASDDSNYITGQVINIDGG 244
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246 | Back alignment and structure |
|---|
Score = 157 bits (400), Expect = 4e-47
Identities = 73/260 (28%), Positives = 124/260 (47%), Gaps = 24/260 (9%)
Query: 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLE 67
+ K AL+TG GIG I+LQL + G +A+ K + V + + G+ + ++
Sbjct: 1 MKMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQ 60
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVG 123
+V ++ +++ ++ FG LD+LVN A G N L+ + + VI+ + G
Sbjct: 61 ANVADADEVKAMIKEVVSQFGSLDVLVNNA-GITRDNLLM---RMKEQEWDDVIDTNLKG 116
Query: 124 TFIMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITR 181
F +A + ++ G IIN+S+ + Q + A KA V +T+
Sbjct: 117 VFNCIQKATPQMLRQRSGA----------IINLSSVVGAVGNPGQANYVATKAGVIGLTK 166
Query: 182 SLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241
S A E + I VN +APG I + L +E++ + + +FG+ DIA
Sbjct: 167 SAARELAS-RGITVNAVAPGFI-VSDMTDAL-SDELKEQMLTQIPLARFGQDTDIANTVA 223
Query: 242 YLASDAGKYVNGNTLIVDGG 261
+LASD KY+ G T+ V+GG
Sbjct: 224 FLASDKAKYITGQTIHVNGG 243
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260 | Back alignment and structure |
|---|
Score = 157 bits (400), Expect = 4e-47
Identities = 57/263 (21%), Positives = 98/263 (37%), Gaps = 26/263 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+ G+V ++TG GIG I+LQL K GA + I GR LR SLG + + D
Sbjct: 3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCD 62
Query: 70 VRKREDAVRVVEST-INHFGKLDILVNAAAGNFLV-------PAEDLSPNGFRTVIEIDS 121
+ + + E G+LD+LVN A + + + + +
Sbjct: 63 SSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGL 122
Query: 122 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS--ATLHYTATWYQIHVSAAKAAVDSI 179
G + + + G G+I+ IS +L Y + + KAA D +
Sbjct: 123 RGHYFCSVYGARLMVPAG--------QGLIVVISSPGSLQYM---FNVPYGVGKAACDKL 171
Query: 180 TRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT--DYMAAYKFGEK-WDI 236
A E + + + PG ++ +A EE+ + +A+ E
Sbjct: 172 AADCAHELR-RHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELS 230
Query: 237 AMAALYLASDAGK-YVNGNTLIV 258
+ LA+D ++G L
Sbjct: 231 GKCVVALATDPNILSLSGKVLPS 253
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246 | Back alignment and structure |
|---|
Score = 157 bits (399), Expect = 5e-47
Identities = 91/260 (35%), Positives = 132/260 (50%), Gaps = 24/260 (9%)
Query: 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLE 67
+LKGKVAL+TG GIG I++ L K GA + + + V + LG AI +
Sbjct: 1 MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVR 60
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVG 123
DV ED +V+ T++ FG++DILVN A G N L+ + + TVI + G
Sbjct: 61 ADVANAEDVTNMVKQTVDVFGQVDILVNNA-GVTKDNLLM---RMKEEEWDTVINTNLKG 116
Query: 124 TFIMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITR 181
F+ +++ ++ GR I+NI++ + T Q + AAKA V +T+
Sbjct: 117 VFLCTKAVSRFMMRQRHGR----------IVNIASVVGVTGNPGQANYVAAKAGVIGLTK 166
Query: 182 SLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241
+ A E + I VN IAPG I T L E I+++ + A +FGE DIA A
Sbjct: 167 TSAKELAS-RNITVNAIAPGFI-ATDMTDVL-DENIKAEMLKLIPAAQFGEAQDIANAVT 223
Query: 242 YLASDAGKYVNGNTLIVDGG 261
+ ASD KY+ G TL VDGG
Sbjct: 224 FFASDQSKYITGQTLNVDGG 243
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247 | Back alignment and structure |
|---|
Score = 156 bits (398), Expect = 6e-47
Identities = 79/258 (30%), Positives = 118/258 (45%), Gaps = 23/258 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L KVAL+TG GIGFE++ L GA + + ++ G A GL +
Sbjct: 3 LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLN 62
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGTF 125
+ E +DILVN AG N ++ +S + +++VI + F
Sbjct: 63 ISDIESIQNFFAEIKAENLAIDILVN-NAGITRDNLMM---RMSEDEWQSVINTNLSSIF 118
Query: 126 IMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
M E ++ + K+ GR II+I + + Q + AAKA V ++SL
Sbjct: 119 RMSKECVRGMMKKRWGR----------IISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSL 168
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
A E + I VN +APG I T KL +E +S + + + GE DIA A +L
Sbjct: 169 AYEVAS-RNITVNVVAPGFI-ATDMTDKL-TDEQKSFIATKIPSGQIGEPKDIAAAVAFL 225
Query: 244 ASDAGKYVNGNTLIVDGG 261
AS+ KY+ G TL V+GG
Sbjct: 226 ASEEAKYITGQTLHVNGG 243
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264 | Back alignment and structure |
|---|
Score = 156 bits (398), Expect = 9e-47
Identities = 74/264 (28%), Positives = 123/264 (46%), Gaps = 26/264 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP------- 62
L+ +AL+TG GSGIG +S++L GA +A + + V L G
Sbjct: 5 LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGN 64
Query: 63 AIGLEGDVRKREDAVRVVESTINHFGK-LDILVNAAAG----NFLVPAEDLSPNGFRTVI 117
+ DV + A ++E F + ++V+ AG FL+ +S + + VI
Sbjct: 65 HAAFQADVSEARAARCLLEQVQACFSRPPSVVVS-CAGITQDEFLL---HMSEDDWDKVI 120
Query: 118 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVD 177
++ GTF++ A + L G G IINIS+ + Q + +A+KA V
Sbjct: 121 AVNLKGTFLVTQAAAQALVSNGC-------RGSIINISSIVGKVGNVGQTNYAASKAGVI 173
Query: 178 SITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA 237
+T++ A E G + IR N + PG I T K+ P+++ K T+ + G+ D+A
Sbjct: 174 GLTQTAARELGR-HGIRCNSVLPGFI-ATPMTQKV-PQKVVDKITEMIPMGHLGDPEDVA 230
Query: 238 MAALYLASDAGKYVNGNTLIVDGG 261
+LAS+ Y+ G ++ V GG
Sbjct: 231 DVVAFLASEDSGYITGTSVEVTGG 254
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252 | Back alignment and structure |
|---|
Score = 156 bits (396), Expect = 1e-46
Identities = 42/237 (17%), Positives = 78/237 (32%), Gaps = 12/237 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+ + G G IG EI+ + G + R L VA + + G + D
Sbjct: 5 PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLD 64
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
R ++ + + L++ + N P + + FR V E+ F+
Sbjct: 65 ARNEDEVTAFLN-AADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGR 123
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
E+ + + G+G+ I AT ++AK + ++ +S+A E
Sbjct: 124 ESARLMLAHGQGK--------IFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMP 175
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
+ I + DTA V + + A +A A L
Sbjct: 176 KNIHVAHLIIDSGV-DTAWVRERREQMFGKDALANPD--LLMPPAAVAGAYWQLYQQ 229
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291 | Back alignment and structure |
|---|
Score = 157 bits (398), Expect = 2e-46
Identities = 49/286 (17%), Positives = 94/286 (32%), Gaps = 41/286 (14%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-------------------MGRRKTVLR 50
VAL+TG +G I+ L G A+ + ++
Sbjct: 7 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQ 66
Query: 51 SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVN--------------A 96
+ ++ + + + V +V + H+G+ D+LVN
Sbjct: 67 ADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDE 126
Query: 97 AAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISA 156
V + + +++ + + + + IIN+
Sbjct: 127 DGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAG--TPAKHRGTNYSIINMVD 184
Query: 157 TLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE 216
+ + AK A++ +TRS ALE IRVNG+ PG + P
Sbjct: 185 AMTNQPLLGYTIYTMAKGALEGLTRSAALELA-PLQIRVNGVGPGLSVLVDDM----PPA 239
Query: 217 IRSKATDYMAAYK-FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 261
+ + Y+ +++ ++L S KY+ G + VDGG
Sbjct: 240 VWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGG 285
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328 | Back alignment and structure |
|---|
Score = 157 bits (399), Expect = 3e-46
Identities = 50/286 (17%), Positives = 95/286 (33%), Gaps = 41/286 (14%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-------------------MGRRKTVLR 50
VAL+TG +G I+ L G A+ + ++
Sbjct: 44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQ 103
Query: 51 SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA------------- 97
+ ++ + + + V +V + H+G+ D+LVN A
Sbjct: 104 ADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDE 163
Query: 98 -AGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISA 156
V + + +++ + + + + IIN+
Sbjct: 164 DGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAG--TPAKHRGTNYSIINMVD 221
Query: 157 TLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE 216
+ + AK A++ +TRS ALE IRVNG+ PG + P
Sbjct: 222 AMTNQPLLGYTIYTMAKGALEGLTRSAALELA-PLQIRVNGVGPGLSVLVDDM----PPA 276
Query: 217 IRSKATDYMAAYK-FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 261
+ + Y+ +++ ++L S KY+ G + VDGG
Sbjct: 277 VWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGG 322
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245 | Back alignment and structure |
|---|
Score = 154 bits (393), Expect = 3e-46
Identities = 77/266 (28%), Positives = 120/266 (45%), Gaps = 45/266 (16%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LK K L+TG GIG K GA + + LR A + A + D
Sbjct: 3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAE-----AVGAHPVVMD 57
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAG----NFLV--PAEDLSPNGFRTVIEIDSVG 123
V R + H G+LD +V+ AG NF P ED + V+ ++ G
Sbjct: 58 VADPASVERGFAEALAHLGRLDGVVH-YAGITRDNFHWKMPLED-----WELVLRVNLTG 111
Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH--------YTATWYQIHVSAAKAA 175
+F++ A + +++ G I+ ++ ++ Y +A+ A
Sbjct: 112 SFLVAKAASEAMREKNPGS--------IVLTASRVYLGNLGQANY---------AASMAG 154
Query: 176 VDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 235
V +TR+LALE G + IRVN +APG I +T +K+ PE++R KA + G+ +
Sbjct: 155 VVGLTRTLALELGR-WGIRVNTLAPGFI-ETRMTAKV-PEKVREKAIAATPLGRAGKPLE 211
Query: 236 IAMAALYLASDAGKYVNGNTLIVDGG 261
+A AAL+L SD ++ G L VDGG
Sbjct: 212 VAYAALFLLSDESSFITGQVLFVDGG 237
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248 | Back alignment and structure |
|---|
Score = 154 bits (393), Expect = 3e-46
Identities = 74/259 (28%), Positives = 128/259 (49%), Gaps = 24/259 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-HSLGIPAIGLEG 68
L+GKV+L+TG GIG I+ +L G+ + I G ++ + + G+ A G+E
Sbjct: 5 LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEM 64
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGT 124
++ E + E N +DILVN AG + +S + V++++ GT
Sbjct: 65 NLLSEESINKAFEEIYNLVDGIDILVN-NAGITRDKLFL---RMSLLDWEEVLKVNLTGT 120
Query: 125 FIMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 182
F++ +L+ + ++ GR I+NIS+ + +T Q++ S KA + T+S
Sbjct: 121 FLVTQNSLRKMIKQRWGR----------IVNISSVVGFTGNVGQVNYSTTKAGLIGFTKS 170
Query: 183 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242
LA E + VN +APG I +T + L EEI+ K + + +FG ++A L+
Sbjct: 171 LAKELAP-RNVLVNAVAPGFI-ETDMTAVL-SEEIKQKYKEQIPLGRFGSPEEVANVVLF 227
Query: 243 LASDAGKYVNGNTLIVDGG 261
L S+ Y+ G + V+GG
Sbjct: 228 LCSELASYITGEVIHVNGG 246
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248 | Back alignment and structure |
|---|
Score = 153 bits (390), Expect = 1e-45
Identities = 76/258 (29%), Positives = 122/258 (47%), Gaps = 26/258 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+GKVAL+TG GIG I+ L + GA + ++ ++ LG G+ +
Sbjct: 7 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDY---LGDNGKGMALN 63
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGTF 125
V E V+++ + FG +DILVN AG N L+ + + ++E + F
Sbjct: 64 VTNPESIEAVLKAITDEFGGVDILVN-NAGITRDNLLM---RMKEEEWSDIMETNLTSIF 119
Query: 126 IMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
+ L+ + K+ GR IIN+ + + Q + +AAKA V T+S+
Sbjct: 120 RLSKAVLRGMMKKRQGR----------IINVGSVVGTMGNAGQANYAAAKAGVIGFTKSM 169
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
A E + + VN +APG I +T L +E R+ + A + G+ +IA A +L
Sbjct: 170 AREVAS-RGVTVNTVAPGFI-ETDMTKAL-NDEQRTATLAQVPAGRLGDPREIASAVAFL 226
Query: 244 ASDAGKYVNGNTLIVDGG 261
AS Y+ G TL V+GG
Sbjct: 227 ASPEAAYITGETLHVNGG 244
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266 | Back alignment and structure |
|---|
Score = 152 bits (386), Expect = 7e-45
Identities = 71/258 (27%), Positives = 113/258 (43%), Gaps = 26/258 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L G+ AL+TG GIG I+ GA + + G R+ L+ A LG +
Sbjct: 25 LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAAD---LGKDVFVFSAN 81
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGTF 125
+ R+ ++ E +DILVN AG V + + V+ ++
Sbjct: 82 LSDRKSIKQLAEVAEREMEGIDILVN-NAGITRDGLFV---RMQDQDWDDVLAVNLTAAS 137
Query: 126 IMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
+ E + + ++ GR IINI++ + Q + AAKA + +++L
Sbjct: 138 TLTRELIHSMMRRRYGR----------IINITSIVGVVGNPGQTNYCAAKAGLIGFSKAL 187
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
A E + I VN IAPG I +A KL E+ + + + G +IA A +YL
Sbjct: 188 AQEIAS-RNITVNCIAPGFI-KSAMTDKL-NEKQKEAIMAMIPMKRMGIGEEIAFATVYL 244
Query: 244 ASDAGKYVNGNTLIVDGG 261
ASD Y+ G TL ++GG
Sbjct: 245 ASDEAAYLTGQTLHINGG 262
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255 | Back alignment and structure |
|---|
Score = 151 bits (383), Expect = 1e-44
Identities = 46/258 (17%), Positives = 86/258 (33%), Gaps = 23/258 (8%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
V +TG SGIG + L + G + + R + A L + G + + +
Sbjct: 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQA---DIEADLSTPGGRETAVAAVLDR 58
Query: 73 REDAVRVV-----ESTINHFGKLDILVNAAAGNFLVPA--EDLSPNGFRTVIEIDSVGTF 125
+ + L + VN + L+ E LS + + S+
Sbjct: 59 CGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAAT 118
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
L ++ G + + +K AV + R +
Sbjct: 119 QPGAAELPMVEAML--------AGDEARAIELAEQQG-QTHLAYAGSKYAVTCLARRNVV 169
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
+W +R+N +APG + +T + P S + E ++A A +L
Sbjct: 170 DWA-GRGVRLNVVAPGAV-ETPLLQASKADPRYGESTRRFVAPLGRGSEPREVAEAIAFL 227
Query: 244 ASDAGKYVNGNTLIVDGG 261
+++G+ L VDGG
Sbjct: 228 LGPQASFIHGSVLFVDGG 245
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250 | Back alignment and structure |
|---|
Score = 151 bits (383), Expect = 1e-44
Identities = 48/256 (18%), Positives = 90/256 (35%), Gaps = 24/256 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG---IPAIGL 66
+ +A++TG GIG I+ L G + ++ R K L + I L
Sbjct: 5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVL 64
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
D+ A ++ +G +DILVN AA F+ + + FR ++EI+ + +
Sbjct: 65 PLDITDCTKADTEIKDIHQKYGAVDILVN-AAAMFMDGSLSEPVDNFRKIMEINVIAQYG 123
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
+ + +K G I N+++ + K A+ + SL E
Sbjct: 124 ILKTVTEIMKVQKNGY--------IFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRE 175
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
IRV + PG + +T ++ KA + + D+ L +
Sbjct: 176 LA-PLGIRVTTLCPGWV-NT---------DMAKKAGTPFKDEEMIQPDDLLNTIRCLLNL 224
Query: 247 -AGKYVNGNTLIVDGG 261
+ +
Sbjct: 225 SENVCIKDIVFEMKKS 240
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256 | Back alignment and structure |
|---|
Score = 149 bits (380), Expect = 3e-44
Identities = 61/259 (23%), Positives = 105/259 (40%), Gaps = 24/259 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEG 68
+ ++A +TGG GIG I +L K G + G + +LG EG
Sbjct: 11 MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEG 70
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGT 124
+V + + + G++D+LVN A G ++ ++ VI+ +
Sbjct: 71 NVGDWDSTKQAFDKVKAEVGEIDVLVNNA-GITRDVVFR---KMTREDWQAVIDTNLTSL 126
Query: 125 FIMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 182
F + + + + + GR IINIS+ + Q + S AKA + T S
Sbjct: 127 FNVTKQVIDGMVERGWGR----------IINISSVNGQKGQFGQTNYSTAKAGIHGFTMS 176
Query: 183 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242
LA E T + VN ++PG I T V + ++ K + + G +I +
Sbjct: 177 LAQEVAT-KGVTVNTVSPGYI-GTDMVKAI-RPDVLEKIVATIPVRRLGSPDEIGSIVAW 233
Query: 243 LASDAGKYVNGNTLIVDGG 261
LAS+ + G ++GG
Sbjct: 234 LASEESGFSTGADFSLNGG 252
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286 | Back alignment and structure |
|---|
Score = 149 bits (379), Expect = 1e-43
Identities = 48/206 (23%), Positives = 84/206 (40%), Gaps = 11/206 (5%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
+ F+ ++L+GK ++TG GIG E++ L K GA + + R K L+ V+ LG
Sbjct: 17 LNEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG 76
Query: 61 -IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 119
A + G + A + V G LD+L+ N + + R +E+
Sbjct: 77 AASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEV 136
Query: 120 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSI 179
+ + ++ AL LK+ G I+ +S+ A SA+K A+D
Sbjct: 137 NFLSYVVLTVAALPMLKQS---------NGSIVVVSSLAGKVAYPMVAAYSASKFALDGF 187
Query: 180 TRSLALEWGTD-YAIRVNGIAPGPIK 204
S+ E+ + + G I
Sbjct: 188 FSSIRKEYSVSRVNVSITLCVLGLID 213
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249 | Back alignment and structure |
|---|
Score = 148 bits (376), Expect = 1e-43
Identities = 56/252 (22%), Positives = 108/252 (42%), Gaps = 25/252 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
++ K L+ GIG ++ L + GA + I R + +L+ + + D
Sbjct: 17 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRY---------VVCD 67
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+RK ++ ++DILV A G ++L+ F+ I+ + +
Sbjct: 68 LRK------DLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVR 121
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
L +K+ G G+ I+ I++ + ++A+ A+ ++L+ E
Sbjct: 122 NYLPAMKEKGWGR--------IVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAP 173
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK 249
Y I VN +APG +T V +L EE + + + + + +IA +L S+
Sbjct: 174 -YGITVNCVAPGWT-ETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKAS 231
Query: 250 YVNGNTLIVDGG 261
Y+ G T++VDGG
Sbjct: 232 YLTGQTIVVDGG 243
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269 | Back alignment and structure |
|---|
Score = 148 bits (375), Expect = 3e-43
Identities = 65/262 (24%), Positives = 114/262 (43%), Gaps = 23/262 (8%)
Query: 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMG-RRKTVLRSAVAALHSLGIPAIG 65
G + +VA +TGG G+G IS +L G A+A+ R + + + G
Sbjct: 20 GSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKA 79
Query: 66 LEGDVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDS 121
DV E R E + FGK+D+L+N AG + ++ + V+ D
Sbjct: 80 YAVDVADFESCERCAEKVLADFGKVDVLIN-NAGITRDATFM---KMTKGDWDAVMRTDL 135
Query: 122 VGTFIMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSI 179
F + + + + ++ GR I+NI + + Q + ++AKA +
Sbjct: 136 DAMFNVTKQFIAGMVERRFGR----------IVNIGSVNGSRGAFGQANYASAKAGIHGF 185
Query: 180 TRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239
T++LALE I VN ++PG + TA V + + + +K + + G ++A
Sbjct: 186 TKTLALETAK-RGITVNTVSPGYL-ATAMVEAVPQDVLEAKILPQIPVGRLGRPDEVAAL 243
Query: 240 ALYLASDAGKYVNGNTLIVDGG 261
+L SD +V G L ++GG
Sbjct: 244 IAFLCSDDAGFVTGADLAINGG 265
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269 | Back alignment and structure |
|---|
Score = 147 bits (374), Expect = 4e-43
Identities = 76/260 (29%), Positives = 131/260 (50%), Gaps = 28/260 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEG 68
L ++AL+TG GIG I+L+L GA +A+ VAA+ + G A ++
Sbjct: 26 LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKA 85
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGT 124
DV + + + + I +G+LD+LVN AG L+ + + +++V++++ G
Sbjct: 86 DVSQESEVEALFAAVIERWGRLDVLVN-NAGITRDTLLL---RMKRDDWQSVLDLNLGGV 141
Query: 125 FIMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 182
F+ A K + ++ GR IINI++ + Q + SAAKA V +T++
Sbjct: 142 FLCSRAAAKIMLKQRSGR----------IINIASVVGEMGNPGQANYSAAKAGVIGLTKT 191
Query: 183 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242
+A E + I VN +APG I T S+LA E++ + ++GE ++A +
Sbjct: 192 VAKELAS-RGITVNAVAPGFI-ATDMTSELAAEKLLEV----IPLGRYGEAAEVAGVVRF 245
Query: 243 LASD-AGKYVNGNTLIVDGG 261
LA+D A Y+ G + +DGG
Sbjct: 246 LAADPAAAYITGQVINIDGG 265
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244 | Back alignment and structure |
|---|
Score = 146 bits (371), Expect = 7e-43
Identities = 71/257 (27%), Positives = 119/257 (46%), Gaps = 25/257 (9%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVR 71
V ++TG GIG I+L LGK G + + R + + G AI GDV
Sbjct: 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS 61
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
K D ++++ I+ +G +D++VN AG L+ + + + VI+++ G F+
Sbjct: 62 KEADVEAMMKTAIDAWGTIDVVVN-NAGITRDTLLI---RMKKSQWDEVIDLNLTGVFLC 117
Query: 128 CHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
A K + K+ GR IINI++ + Q + +AAKA V +++ A
Sbjct: 118 TQAATKIMMKKRKGR----------IINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAR 167
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA- 244
E + I VN + PG I + +KL E++ K + + G+ ++A +LA
Sbjct: 168 EGAS-RNINVNVVCPGFI-ASDMTAKL-GEDMEKKILGTIPLGRTGQPENVAGLVEFLAL 224
Query: 245 SDAGKYVNGNTLIVDGG 261
S A Y+ G +DGG
Sbjct: 225 SPAASYITGQAFTIDGG 241
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245 | Back alignment and structure |
|---|
Score = 146 bits (370), Expect = 8e-43
Identities = 76/257 (29%), Positives = 119/257 (46%), Gaps = 25/257 (9%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIG-LEGDV 70
+ AL+TG GIG I+L+L + G A+AI G+ + G P + L ++
Sbjct: 2 RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANL 61
Query: 71 RKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGTFI 126
+ E A +V G LD LVN A G LV + + V+E + F
Sbjct: 62 LEAEAATALVHQAAEVLGGLDTLVNNA-GITRDTLLV---RMKDEDWEAVLEANLSAVFR 117
Query: 127 MCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
EA+K + + GR I+NI++ + Q + A+KA + TR++A
Sbjct: 118 TTREAVKLMMKARFGR----------IVNITSVVGILGNPGQANYVASKAGLIGFTRAVA 167
Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
E+ I VN +APG I +T +L P+E++ + A +FG ++A A +L
Sbjct: 168 KEYAQ-RGITVNAVAPGFI-ETEMTERL-PQEVKEAYLKQIPAGRFGRPEEVAEAVAFLV 224
Query: 245 SDAGKYVNGNTLIVDGG 261
S+ Y+ G TL VDGG
Sbjct: 225 SEKAGYITGQTLCVDGG 241
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249 | Back alignment and structure |
|---|
Score = 146 bits (370), Expect = 9e-43
Identities = 80/258 (31%), Positives = 119/258 (46%), Gaps = 30/258 (11%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GK +L+TG SGIG I+ L K G+ + I G + L+S A L +
Sbjct: 12 LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNA---LKDNYTIEVCN 68
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGTF 125
+ +E+ + I+ LDILV AG + + F VI+I+ F
Sbjct: 69 LANKEE----CSNLISKTSNLDILVC-NAGITSDTLAI---RMKDQDFDKVIDINLKANF 120
Query: 126 IMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
I+ EA+K + K+ GR IINIS+ + Q + A+KA + +T+SL
Sbjct: 121 ILNREAIKKMIQKRYGR----------IINISSIVGIAGNPGQANYCASKAGLIGMTKSL 170
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
+ E T I VN +APG I + KL E+ R + +G D+A A +L
Sbjct: 171 SYEVAT-RGITVNAVAPGFI-KSDMTDKL-NEKQREAIVQKIPLGTYGIPEDVAYAVAFL 227
Query: 244 ASDAGKYVNGNTLIVDGG 261
AS+ Y+ G TL V+GG
Sbjct: 228 ASNNASYITGQTLHVNGG 245
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236 | Back alignment and structure |
|---|
Score = 143 bits (364), Expect = 4e-42
Identities = 48/258 (18%), Positives = 81/258 (31%), Gaps = 35/258 (13%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+ ++ GG +G I K+G + + + I ++G+
Sbjct: 1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSA----------NDQADSNILVDGN 50
Query: 70 VRKREDAVRVVESTIN--HFGKLDILVNAAAGNFLVPA-EDLSPNGFRTVIEIDSVGTFI 126
E ++E T + ++D + A G A +I+ + I
Sbjct: 51 KNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAI 110
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
A +LK GG + A T I AKAAV +T SLA +
Sbjct: 111 AAKLATTHLKPGGL----------LQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAK 160
Query: 187 W-GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
G V I P + DT K P S + I+ L +
Sbjct: 161 DSGLPDNSAVLTIMPVTL-DTPMNRKWMPNADHS---------SWTPLSFISEHLLKWTT 210
Query: 246 D-AGKYVNGNTLIVDGGN 262
+ + + +G L + N
Sbjct: 211 ETSSRPSSGALLKITTEN 228
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244 | Back alignment and structure |
|---|
Score = 143 bits (364), Expect = 5e-42
Identities = 43/252 (17%), Positives = 84/252 (33%), Gaps = 27/252 (10%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGA-------AIAIMGRRKTVLRSAVAALHSLGIPAIG 65
+ L+TG G GIG I+L+ + + + R L + G
Sbjct: 3 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT 62
Query: 66 LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 125
+ D+ D R+ + +G +D LVN A DL+ F + + GTF
Sbjct: 63 ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTF 122
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
+ +++ G I I++ A + +K + ++ L
Sbjct: 123 FLTQALFALMERQHSGH--------IFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRL 174
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
+R+ + PG + T K+ +E+++ DIA +
Sbjct: 175 YAR-KCNVRITDVQPGAV-YTPMWGKV-DDEMQALM---------MMPEDIAAPVVQAYL 222
Query: 246 DAGKYVNGNTLI 257
+ V ++
Sbjct: 223 QPSRTVVEEIIL 234
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281 | Back alignment and structure |
|---|
Score = 144 bits (365), Expect = 1e-41
Identities = 54/257 (21%), Positives = 98/257 (38%), Gaps = 14/257 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+G A+++GG G+G +L G + I ++ LG A + +
Sbjct: 28 FEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADE---LGNRAEFVSTN 84
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAA--AGNFLVPAEDLSP---NGFRTVIEIDSVGT 124
V + + +E+ +V + D SP GF I++ GT
Sbjct: 85 VTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGT 144
Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
+ + + + G ++ ++ Y Q +AAKA V +T + A
Sbjct: 145 YNVARLVAASIAA--AEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAAA 202
Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
+ IRVN IAPG + T + + E + A + + G + A AA +L
Sbjct: 203 RDLS-SAGIRVNTIAPGTM-KTPIMESVGEEALAKFAANIPFPKRLGTPDEFADAAAFLL 260
Query: 245 SDAGKYVNGNTLIVDGG 261
++ Y+NG + +DG
Sbjct: 261 TNG--YINGEVMRLDGA 275
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247 | Back alignment and structure |
|---|
Score = 143 bits (363), Expect = 1e-41
Identities = 69/258 (26%), Positives = 109/258 (42%), Gaps = 34/258 (13%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+ L+TGG GIG I+ +L G +A+ R S G+E D
Sbjct: 13 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRG-----SGAPK------GLFGVEVD 61
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGTF 125
V + R + H G +++LV+ A G FL+ ++ F VI + G F
Sbjct: 62 VTDSDAVDRAFTAVEEHQGPVEVLVSNA-GLSADAFLM---RMTEEKFEKVINANLTGAF 117
Query: 126 IMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
+ A + + K GR +I I + Q + +A+KA V + RS+
Sbjct: 118 RVAQRASRSMQRNKFGR----------MIFIGSVSGLWGIGNQANYAASKAGVIGMARSI 167
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
A E + N +APG I DT L E I+ A ++ A + G ++A +L
Sbjct: 168 ARELSK-ANVTANVVAPGYI-DTDMTRAL-DERIQQGALQFIPAKRVGTPAEVAGVVSFL 224
Query: 244 ASDAGKYVNGNTLIVDGG 261
AS+ Y++G + VDGG
Sbjct: 225 ASEDASYISGAVIPVDGG 242
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253 | Back alignment and structure |
|---|
Score = 141 bits (358), Expect = 7e-41
Identities = 64/258 (24%), Positives = 107/258 (41%), Gaps = 34/258 (13%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+ L+TGG GIG I+ G +AI R + ++ D
Sbjct: 19 HMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRS-----GEPPE------GFLAVKCD 67
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAG----NFLVPAEDLSPNGFRTVIEIDSVGTF 125
+ E + + G +++L+ A G L+ +S F +V+E + GTF
Sbjct: 68 ITDTEQVEQAYKEIEETHGPVEVLIANA-GVTKDQLLM---RMSEEDFTSVVETNLTGTF 123
Query: 126 IMCHEALKYL--KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
+ A + + K GR ++ IS+ + + Q + +A+KA + RSL
Sbjct: 124 RVVKRANRAMLRAKKGR----------VVLISSVVGLLGSAGQANYAASKAGLVGFARSL 173
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
A E G+ I N +APG + DT L +E R+ + ++ +IA +L
Sbjct: 174 ARELGS-RNITFNVVAPGFV-DTDMTKVL-TDEQRANIVSQVPLGRYARPEEIAATVRFL 230
Query: 244 ASDAGKYVNGNTLIVDGG 261
ASD Y+ G + VDGG
Sbjct: 231 ASDDASYITGAVIPVDGG 248
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257 | Back alignment and structure |
|---|
Score = 138 bits (349), Expect = 2e-39
Identities = 57/257 (22%), Positives = 105/257 (40%), Gaps = 15/257 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LK +V ++TG SG+G ++ L + GA + + + A LG D
Sbjct: 5 LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAE---LGAAVRFRNAD 61
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAA----AGNFLVPAEDLSPNGFRTVIEIDSVGTF 125
V DA + FG + LVN A L + + + F + ++ +GTF
Sbjct: 62 VTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTF 121
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
M A + + + + G+I+N ++ + Q +A+K V ++T A
Sbjct: 122 NMIRLAAEVMSQ--GEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAAR 179
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-FGEKWDIAMAALYLA 244
E + IRV IAPG DT ++ + P++++ + G + A ++
Sbjct: 180 ELA-RFGIRVVTIAPGIF-DTPMMAGM-PQDVQDALAASVPFPPRLGRAEEYAALVKHIC 236
Query: 245 SDAGKYVNGNTLIVDGG 261
+ +NG + +DG
Sbjct: 237 ENT--MLNGEVIRLDGA 251
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259 | Back alignment and structure |
|---|
Score = 135 bits (341), Expect = 2e-38
Identities = 47/263 (17%), Positives = 86/263 (32%), Gaps = 27/263 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGK---HGAAIAIMGRRKTVLRSAVAALHSL--GIPAI 64
L V +LTG G G ++ QL + G+ + + R +++LR L + + +
Sbjct: 4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVV 63
Query: 65 GLEGDVRKREDAVRVVESTIN----HFGKLDILVNAAA---GNFLVPAEDLSPNGFRTVI 117
D+ R++ + + +L+N AA
Sbjct: 64 LAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYW 123
Query: 118 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVD 177
++ + L + ++NIS+ A KAA D
Sbjct: 124 ALNLTSMLCLTSGTLNAFQDSP------GLSKTVVNISSLCALQPYKGWGLYCAGKAARD 177
Query: 178 SITRSLALEWGTDYAIRVNGIAPGPIKDT----AGVSKLAPEEIRSKATDYMAAYKFGEK 233
+ + LA E + ++RV APGP+ D E+RSK + +
Sbjct: 178 MLYQVLAAE---EPSVRVLSYAPGPL-DNDMQQLARETSKDPELRSKLQKLKSDGALVDC 233
Query: 234 WDIAMAALYLASDAGKYVNGNTL 256
A L L + +G +
Sbjct: 234 GTSAQKLLGLLQKD-TFQSGAHV 255
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265 | Back alignment and structure |
|---|
Score = 135 bits (341), Expect = 3e-38
Identities = 57/259 (22%), Positives = 108/259 (41%), Gaps = 17/259 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+KG VA++TGG SG+G + +L GA+ ++ + + LG + D
Sbjct: 10 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKK---LGNNCVFAPAD 66
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAA----AGNFLVPAED--LSPNGFRTVIEIDSVG 123
V +D + FG++D+ VN A A + + F+ V++++ +G
Sbjct: 67 VTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMG 126
Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
TF + + + G+IIN ++ + Q SA+K + +T +
Sbjct: 127 TFNVIRLVAGEMGQ--NEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPI 184
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-FGEKWDIAMAALY 242
A + IRV IAPG T ++ L PE++ + + G+ + A
Sbjct: 185 ARDLA-PIGIRVMTIAPGLF-GTPLLTSL-PEKVCNFLASQVPFPSRLGDPAEYAHLVQA 241
Query: 243 LASDAGKYVNGNTLIVDGG 261
+ + ++NG + +DG
Sbjct: 242 IIENP--FLNGEVIRLDGA 258
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 1e-37
Identities = 50/272 (18%), Positives = 89/272 (32%), Gaps = 49/272 (18%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
+ +++G +GIG L G I + R + D+
Sbjct: 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIR-----------------DAEVIADLST 44
Query: 73 REDAVRVVESTI-NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
E + + + +D LV A L P + V+ ++ G +
Sbjct: 45 AEGRKQAIADVLAKCSKGMDGLVLCAG---LGPQTKV----LGNVVSVNYFGATELMDAF 97
Query: 132 LKYLKKGGRG--------------------QASSSSGGIIINISATLHYTATWYQIHVSA 171
L LKKG + + +G + H + +
Sbjct: 98 LPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAG 157
Query: 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK-LAPEEIRSKATDYMAAYK- 229
+K A+ R A WG + +R+N IAPG +T + L ++
Sbjct: 158 SKNALTVAVRKRAAAWG-EAGVRLNTIAPGAT-ETPLLQAGLQDPRYGESIAKFVPPMGR 215
Query: 230 FGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 261
E ++A +L S A YV+G +++DGG
Sbjct: 216 RAEPSEMASVIAFLMSPAASYVHGAQIVIDGG 247
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 1e-36
Identities = 48/195 (24%), Positives = 81/195 (41%), Gaps = 8/195 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
G+ A++TGG SGIG + + + GA + + + L AV L G A G+ D
Sbjct: 29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCD 88
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
VR ++ VR+ + G +D++ + A P ++ + +R VI+ID G+
Sbjct: 89 VRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVE 148
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
L L + G GG I ++ AK V + +LA E
Sbjct: 149 AFLPRLLEQGT-------GGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVK- 200
Query: 190 DYAIRVNGIAPGPIK 204
I V+ + P ++
Sbjct: 201 PNGIGVSVLCPMVVE 215
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 3e-36
Identities = 65/257 (25%), Positives = 110/257 (42%), Gaps = 17/257 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
++ VA++TGG SG+G + +L GA + ++ R + LG A D
Sbjct: 7 IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIR------GEDVVADLGDRARFAAAD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAA----AGNFLVPAEDLSPNGFRTVIEIDSVGTF 125
V ++ G L I+VN A A L S FR +++I+ VG+F
Sbjct: 61 VTDEAAVASALD-LAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSF 119
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
+ A + + K ++ G+IIN ++ + Q SA+K V +T +A
Sbjct: 120 NVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIAR 179
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-FGEKWDIAMAALYLA 244
+ + IRV IAPG DT ++ L PEE R+ + G + A+++
Sbjct: 180 DLA-SHRIRVMTIAPGLF-DTPLLASL-PEEARASLGKQVPHPSRLGNPDEYGALAVHII 236
Query: 245 SDAGKYVNGNTLIVDGG 261
+ +NG + +DG
Sbjct: 237 ENP--MLNGEVIRLDGA 251
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235 | Back alignment and structure |
|---|
Score = 128 bits (325), Expect = 3e-36
Identities = 52/238 (21%), Positives = 87/238 (36%), Gaps = 29/238 (12%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-HSLGIPAIGLEGDV 70
KVA++TG GIG I+ L + G A+A+ R L L G+ DV
Sbjct: 2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDV 61
Query: 71 RKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE 130
K E + + FG +D++V A + E+LS F +IE++ +G +
Sbjct: 62 SKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKA 121
Query: 131 ALKYLKKGGRGQASSSSGGIIINI-SATLHYTATW--YQIHVSAAKAAVDSITRSLALEW 187
L LK+ G G ++ + Y + K A ++ R+ +E
Sbjct: 122 FLDSLKRTG--------GLALVTTSDVSARLIPYGGGY----VSTKWAARALVRTFQIE- 168
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
+ +R + PG + DT + + +IA A L
Sbjct: 169 --NPDVRFFELRPGAV-DT---------YFGGSKPGKPKEKGYLKPDEIAEAVRCLLK 214
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 5e-36
Identities = 53/218 (24%), Positives = 89/218 (40%), Gaps = 27/218 (12%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+TG GIG + L G + +M R + L++ A L A+ L GD
Sbjct: 3 GMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEG----ALPLPGD 58
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
VR+ D R V + FG+L LVN A + P +L+ +R V++ + G F+
Sbjct: 59 VREEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIR 118
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATL-HYT---ATWYQIHVSAAKAAVDSITRSLAL 185
A+ L + G G I+N+ + Y +A+K + + + L
Sbjct: 119 HAVPALLRRGGGT--------IVNVGSLAGKNPFKGGAAY----NASKFGLLGLAGAAML 166
Query: 186 EWGTDYAIRVNGIAPGPI------KDTAGVSKLAPEEI 217
+ + +RV + PG + KL PE++
Sbjct: 167 DLR-EANVRVVNVLPGSVDTGFAGNTPGQAWKLKPEDV 203
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 2e-35
Identities = 53/253 (20%), Positives = 97/253 (38%), Gaps = 32/253 (12%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LK K+A++TG G+G EI L + A+ GR L + I + D
Sbjct: 3 LKKKIAVVTGATGGMGIEIVKDLSRDHIVYAL-GRNPEHLAALAEIEGVEPIES-----D 56
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ K V+ + + +D LV+AAA E S + ++++ + +
Sbjct: 57 IVKEVLEEGGVD-KLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSR 115
Query: 130 EALKYLKKGGRGQASSSSGGIIINIS--ATLHYTATW--YQIHVSAAKAAVDSITRSLAL 185
+ L L+ G +I I+ A Y +A+K A+ + +
Sbjct: 116 QLLPALRAA---------SGCVIYINSGAGNGPHPGNTIY----AASKHALRGLADAFRK 162
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
E + IRV+ ++PGP +T + L + + + E +IA A ++
Sbjct: 163 EEA-NNGIRVSTVSPGPT-NTPMLQGLMDSQGTN-----FRPEIYIEPKEIANAIRFVID 215
Query: 246 DAGKYVNGNTLIV 258
AG+ + V
Sbjct: 216 -AGETTQITNVDV 227
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202 | Back alignment and structure |
|---|
Score = 125 bits (317), Expect = 2e-35
Identities = 40/247 (16%), Positives = 75/247 (30%), Gaps = 48/247 (19%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
LL G +G + +L K A + GR + + D+
Sbjct: 3 AMKILLIGASGTLGSAVKERLEK-KAEVITAGRH-----------------SGDVTVDIT 44
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
+ ++ E GK+D +V+A P +L+P I G +
Sbjct: 45 NIDSIKKMYE----QVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLG 100
Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
+ L G + + + A AV + +S A+E
Sbjct: 101 IDSLNDKGS----------FTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMPRG- 149
Query: 192 AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYV 251
IR+N ++P ++++ K + + +A A + S G
Sbjct: 150 -IRINTVSPNVLEESW-----------DKLEPFFEGFLPVPAAKVARA--FEKSVFG-AQ 194
Query: 252 NGNTLIV 258
G + V
Sbjct: 195 TGESYQV 201
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454 | Back alignment and structure |
|---|
Score = 130 bits (329), Expect = 5e-35
Identities = 65/266 (24%), Positives = 104/266 (39%), Gaps = 35/266 (13%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLE 67
L GKVA++TG GIG I+ + GA + + A L + + L
Sbjct: 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVD-----GAAEDLKRVADKVGGTALT 265
Query: 68 GDVRKREDAVRVVESTINHFG-KLDILVNAAAG----NFLV--PAEDLSPNGFRTVIEID 120
DV + ++ H G K+DILVN A G L + + VI ++
Sbjct: 266 LDVTADDAVDKITAHVTEHHGGKVDILVNNA-GITRDKLLANMDEKR-----WDAVIAVN 319
Query: 121 SVGTFIMCHEALKY--LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDS 178
+ + + + +GGR +I +S+ Q + + KA +
Sbjct: 320 LLAPQRLTEGLVGNGTIGEGGR----------VIGLSSMAGIAGNRGQTNYATTKAGMIG 369
Query: 179 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 238
+ +LA D I +N +APG I +T + P R + ++ G+ D+A
Sbjct: 370 LAEALAPVLA-DKGITINAVAPGFI-ETKMTEAI-PLATREVGRRLNSLFQGGQPVDVAE 426
Query: 239 AALYLASDAGKYVNGNTLIVDGGNWL 264
Y AS A V GNT+ V G L
Sbjct: 427 LIAYFASPASNAVTGNTIRVCGQAML 452
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 7e-35
Identities = 50/197 (25%), Positives = 87/197 (44%), Gaps = 5/197 (2%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLE 67
G+ A +TGG +G+G + QL G +AI R+ + A+A L + G +G++
Sbjct: 6 FAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQ 65
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
DV RE + FG + IL N A N P E+ S + + ++ ++ G
Sbjct: 66 LDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNG 125
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
+ + + R +A GG ++N ++ + A + K AV ++ SL
Sbjct: 126 VTTFVPRMVE--RVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSL 183
Query: 188 GTDYAIRVNGIAPGPIK 204
Y I V+ + PG +K
Sbjct: 184 L-KYEIGVSVLCPGLVK 199
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322 | Back alignment and structure |
|---|
Score = 125 bits (315), Expect = 5e-34
Identities = 67/270 (24%), Positives = 113/270 (41%), Gaps = 19/270 (7%)
Query: 2 ESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAI-------AIMGRRKTVLRSA-- 52
+ P ++ G+V ++TG G GIG +L GA + + G + +A
Sbjct: 17 QGPGSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQS 76
Query: 53 -VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 111
V + + G A+ +V + A ++++ + FG LD+LVN A + S
Sbjct: 77 VVDEITAAGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEE 136
Query: 112 GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171
F VI + G F A Y + G +A + G IIN S+ + Q + SA
Sbjct: 137 EFDAVIAVHLKGHFATMRHAAAYWR--GLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSA 194
Query: 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 231
AKA + ++T A E G Y + VN IAP T + E + ++ +
Sbjct: 195 AKAGIATLTLVGAAEMGR-YGVTVNAIAPS--ARTRMTETVFAEMMATQD----QDFDAM 247
Query: 232 EKWDIAMAALYLASDAGKYVNGNTLIVDGG 261
+++ ++L S + V G V+GG
Sbjct: 248 APENVSPLVVWLGSAEARDVTGKVFEVEGG 277
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 1e-33
Identities = 72/253 (28%), Positives = 108/253 (42%), Gaps = 20/253 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+GKVAL+TG SGIG + L GAA+AI RR LR+ L + G LE D
Sbjct: 5 LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELD 64
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V R+ V ST+ G LDILVN A L P ED + +I+ + +G M
Sbjct: 65 VADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTR 124
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATL-HYT---ATWYQIHVSAAKAAVDSITRSLAL 185
AL +L + G ++ +S+ A Y A K V++ + +L
Sbjct: 125 AALPHLLRS---------KGTVVQMSSIAGRVNVRNAAVY----QATKFGVNAFSETLRQ 171
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
E + +RV I PG DT + + ++ + + DIA A Y +
Sbjct: 172 EVT-ERGVRVVVIEPGTT-DTELRGHITHTATKEMYEQRISQIRKLQAQDIAEAVRYAVT 229
Query: 246 DAGKYVNGNTLIV 258
A + + + +
Sbjct: 230 -APHHATVHEIFI 241
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 2e-32
Identities = 58/254 (22%), Positives = 102/254 (40%), Gaps = 14/254 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP--AIGLE 67
+ ++AL+TG GIG ++ L + G + R + A S G P I
Sbjct: 30 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYR 89
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
D+ ED + + + + +DI +N A S +G++ + ++ + I
Sbjct: 90 CDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSIC 149
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATL-HYTATWYQIHV-SAAKAAVDSITRSLAL 185
EA + +K+ R G IINI++ H H SA K AV ++T L
Sbjct: 150 TREAYQSMKE--RNVDD----GHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQ 203
Query: 186 EWGT-DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
E IR I+PG + +T + ++ KA K + D+A A +Y+
Sbjct: 204 ELREAQTHIRATCISPGVV-ET-QFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVL 261
Query: 245 SDAGKYVNGNTLIV 258
S ++ + +
Sbjct: 262 S-TPAHIQIGDIQM 274
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 2e-32
Identities = 35/197 (17%), Positives = 67/197 (34%), Gaps = 10/197 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+ G++ L+TG G GIG + + K + + + K L A LG D
Sbjct: 29 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVD 88
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
RED + G + ILVN A + E++ + F
Sbjct: 89 CSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTK 148
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
L + K G I+ +++ + + + + ++K A ++L E
Sbjct: 149 AFLPAMTKNNHGH--------IVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAA 200
Query: 190 DYA--IRVNGIAPGPIK 204
++ + P +
Sbjct: 201 LQITGVKTTCLCPNFVN 217
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 3e-32
Identities = 64/254 (25%), Positives = 105/254 (41%), Gaps = 25/254 (9%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
+ AL+TGG SG+G +L L G + + L G I +EGDV +
Sbjct: 3 RSALVTGGASGLGRAAALALKARGYRVVV------------LDLRREGEDLIYVEGDVTR 50
Query: 73 REDAVRVVESTINHFGKLDILVNAA----AGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
ED R V L +V+AA A L FR V+E++ +GTF +
Sbjct: 51 EEDVRRAVARAQE-EAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVL 109
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
A +++ G+I+N ++ + Q +A+K V ++T A E
Sbjct: 110 RLAAWAMRENPPDAEGQR--GVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELA 167
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-FGEKWDIAMAALYLASDA 247
+ IRV +APG DT + L PE+ ++ + G + A L++ +
Sbjct: 168 -GWGIRVVTVAPGLF-DTPLLQGL-PEKAKASLAAQVPFPPRLGRPEEYAALVLHILENP 224
Query: 248 GKYVNGNTLIVDGG 261
+NG + +DG
Sbjct: 225 --MLNGEVVRLDGA 236
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 7e-32
Identities = 52/197 (26%), Positives = 84/197 (42%), Gaps = 19/197 (9%)
Query: 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEG 68
++ KV L+TG GIG I+ +LG GA I + RR+ + + + G A+
Sbjct: 1 MVMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVL 60
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV R ++ ++ +G++D+LVN A L P + + + +I+++ G
Sbjct: 61 DVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGI 120
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATL-HYT---ATWYQIHVSAAKAAVDSITRSLA 184
L ++ GQ IINI + A Y A K AV +I+ L
Sbjct: 121 GAVLPIMEAQRSGQ--------IINIGSIGALSVVPTAAVY----CATKFAVRAISDGLR 168
Query: 185 LEWGTDYAIRVNGIAPG 201
E IRV + PG
Sbjct: 169 QE---STNIRVTCVNPG 182
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 2e-30
Identities = 55/261 (21%), Positives = 104/261 (39%), Gaps = 34/261 (13%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI---------MGRRKTVLRSAVAALHSLG 60
G+V L+TG G G+G +L + GA + + +G+ + V + G
Sbjct: 7 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG 66
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
A+ V E ++V++ ++ FG++D++VN A +S + + +
Sbjct: 67 GKAVANYDSV---EAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVH 123
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
G+F + A ++KK G+ II ++ + Q + SAAK + +
Sbjct: 124 LRGSFQVTRAAWDHMKKQNYGR--------IIMTASASGIYGNFGQANYSAAKLGLLGLA 175
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
+L +E G I N IAP + + PE++ + + +A
Sbjct: 176 NTLVIE-GRKNNIHCNTIAPNAG--SRMTETVMPEDLV----EALKPE------YVAPLV 222
Query: 241 LYLASDAGKYVNGNTLIVDGG 261
L+L ++ NG V G
Sbjct: 223 LWLCHESC-EENGGLFEVGAG 242
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 2e-29
Identities = 59/261 (22%), Positives = 106/261 (40%), Gaps = 34/261 (13%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI---------MGRRKTVLRSAVAALHSLG 60
K KV ++TG G G+G SL+ K GA + + G V + G
Sbjct: 6 FKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNG 65
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
A+ +V D ++VE+ + +FG + +++N A + ++ ++ VI++
Sbjct: 66 GVAVADYNNV---LDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVH 122
Query: 121 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT 180
G F + A Y +K G+ I+N S+ + Q + ++AK+A+
Sbjct: 123 LNGAFAVTKAAWPYFQKQKYGR--------IVNTSSPAGLYGNFGQANYASAKSALLGFA 174
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
+LA E G Y I+ N IA P+ + + P + + + +A
Sbjct: 175 ETLAKE-GAKYNIKANAIA--PLARSRMTESIMPPPML----EKLGPE------KVAPLV 221
Query: 241 LYLASDAGKYVNGNTLIVDGG 261
LYL+S + G V G
Sbjct: 222 LYLSSAEN-ELTGQFFEVAAG 241
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 7e-26
Identities = 67/263 (25%), Positives = 118/263 (44%), Gaps = 30/263 (11%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAALHS 58
S LK KV L+TG G+G+G E + K+GA + + V + +
Sbjct: 311 DASGAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKT----VDEIKA 366
Query: 59 LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIE 118
G A + DV +D+ ++++ I+ +G +DILVN A +S + +V +
Sbjct: 367 AGGEAWPDQHDVA--KDSEAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQ 424
Query: 119 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDS 178
+ +GTF + A Y + G IINI++T + Q + S++KA +
Sbjct: 425 VHLIGTFNLSRLAWPYFVEKQ--------FGRIINITSTSGIYGNFGQANYSSSKAGILG 476
Query: 179 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 238
+++++A+E G I+VN +AP +TA + E+ + + A +A
Sbjct: 477 LSKTMAIE-GAKNNIKVNIVAPH--AETAMTLSIMREQDK----NLYHAD------QVAP 523
Query: 239 AALYLASDAGKYVNGNTLIVDGG 261
+YL +D V G T + GG
Sbjct: 524 LLVYLGTDDV-PVTGETFEIGGG 545
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 5e-29
Identities = 52/257 (20%), Positives = 95/257 (36%), Gaps = 32/257 (12%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
K+ ++TG SGIG I+ + + G + ++ RR L+ A+ ++L D
Sbjct: 14 SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLK-ALNLPNTLCAQV-----D 67
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + + +G D +VN A L + N ++ + +++ +G
Sbjct: 68 VTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQ 127
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATL-HYT---ATWYQIHVSAAKAAVDSITRSLAL 185
L +K G IINIS+ T Y K AV +I+ ++
Sbjct: 128 AVLAPMKARNCGT--------IINISSIAGKKTFPDHAAY----CGTKFAVHAISENVRE 175
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW----DIAMAAL 241
E +RV IAP + T +S ++I+ + D+A A L
Sbjct: 176 EVA-ASNVRVMTIAPSAV-KTELLSHTTSQQIKDGYDAW---RVDMGGVLAADDVARAVL 230
Query: 242 YLASDAGKYVNGNTLIV 258
+ + V + +
Sbjct: 231 FAYQ-QPQNVCIREIAL 246
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230 | Back alignment and structure |
|---|
Score = 104 bits (263), Expect = 3e-27
Identities = 42/246 (17%), Positives = 83/246 (33%), Gaps = 27/246 (10%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
+ ++TG SG+G E++ G A + GR ++ L V L D+
Sbjct: 2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLS-TVTN--CLSNNVGYRARDLAS 58
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
++ ++ E +V++A + ++ P +T+IE + + E +
Sbjct: 59 HQEVEQLFEQL---DSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELV 115
Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
K K ++ I +T + A K AV + S+ LE
Sbjct: 116 KRYKDQPVN---------VVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELK-GKP 165
Query: 193 IRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVN 252
+++ + PG + T E + + F D A+ A
Sbjct: 166 MKIIAVYPGGM-AT---------EFWETSGKSLDTSSFMSAEDAALMIHG-ALANIGNGY 214
Query: 253 GNTLIV 258
+ + V
Sbjct: 215 VSDITV 220
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 5e-27
Identities = 44/206 (21%), Positives = 75/206 (36%), Gaps = 18/206 (8%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
+TG SG G + + + G ++ + GRR+ L+ A+A S
Sbjct: 10 SSGLVPRGSHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQ-ALAGELSAK 68
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG-NFLVPAEDLSPNGFRTVIEI 119
+ L DVR R V++ F L L+N A PA+ + + T+++
Sbjct: 69 TRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDT 128
Query: 120 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS---ATLHY-TATWYQIHVSAAKAA 175
+ G L L G +G I+N+ Y + Y KA
Sbjct: 129 NIKGLLYSTRLLLPRLIAHG-------AGASIVNLGSVAGKWPYPGSHVY----GGTKAF 177
Query: 176 VDSITRSLALEWGTDYAIRVNGIAPG 201
V+ + +L + +RV + PG
Sbjct: 178 VEQFSLNLRCDLQ-GTGVRVTNLEPG 202
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248 | Back alignment and structure |
|---|
Score = 104 bits (263), Expect = 5e-27
Identities = 51/198 (25%), Positives = 81/198 (40%), Gaps = 21/198 (10%)
Query: 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR 73
+ L+TG +G G I+ + + G + GRR+ L+ + LG + DVR R
Sbjct: 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQ-ELKD--ELGDNLYIAQLDVRNR 58
Query: 74 EDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
++ S + +DILVN A + PA S + T+I+ ++ G M L
Sbjct: 59 AAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVL 118
Query: 133 KYLKKGGRGQASSSSGGIIINISATL-HYT---ATWYQIHVSAAKAAVDSITRSLALEWG 188
+ + G IINI +T + Y A KA V + +L +
Sbjct: 119 PGMVERNHGH--------IINIGSTAGSWPYAGGNVY----GATKAFVRQFSLNLRTDL- 165
Query: 189 TDYAIRVNGIAPGPIKDT 206
A+RV I PG + T
Sbjct: 166 HGTAVRVTDIEPGLVGGT 183
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 9e-27
Identities = 63/270 (23%), Positives = 108/270 (40%), Gaps = 39/270 (14%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAI---------MGRRKTVLRSAVAALHSLG 60
G+VA++TG G+G+G E +L + GA + + G + V + G
Sbjct: 17 YDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAG 76
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 120
A+ V D +V+E+ I FG++DILVN A S + V ++
Sbjct: 77 GEAVADYNSV---IDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVH 133
Query: 121 SVGTFIMCHEALKYLKK--GGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDS 178
G+F A Y+KK GR +SS+ GI N Q++ +AAK +
Sbjct: 134 LKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFG----------QVNYTAAKMGLIG 183
Query: 179 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 238
+ ++A+E G + N I P + + P+ + + + IA
Sbjct: 184 LANTVAIE-GARNNVLCNVIVPT--AASRMTEGILPDILF----NELKPKL------IAP 230
Query: 239 AALYLASDAGKYVNGNTLIVDGGNWLSNPR 268
YL ++ + NG+ + G W +
Sbjct: 231 VVAYLCHESCE-DNGSYIESAAG-WATKLH 258
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 7e-26
Identities = 43/202 (21%), Positives = 70/202 (34%), Gaps = 23/202 (11%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIA---IMGRRKTVLRSAVAALHS--LGIPAI 64
L K L+TG +GIG +L+ + + RR L +
Sbjct: 31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVH 90
Query: 65 GLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVG 123
+ D+ + E +E+ F +DILVN A ++ + V + +
Sbjct: 91 VAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTA 150
Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATL-HYT---ATWYQIHVSAAKAAVDSI 179
+ L + G I+N+ + + Y A+K AV +
Sbjct: 151 LINITQAVLPIFQAKNSGD--------IVNLGSIAGRDAYPTGSIY----CASKFAVGAF 198
Query: 180 TRSLALEWGTDYAIRVNGIAPG 201
T SL E + IRV IAPG
Sbjct: 199 TDSLRKEL-INTKIRVILIAPG 219
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207 | Back alignment and structure |
|---|
Score = 99 bits (250), Expect = 1e-25
Identities = 31/190 (16%), Positives = 63/190 (33%), Gaps = 24/190 (12%)
Query: 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRE 74
L+TG G+G + L G + + GRR L + + +PA D+
Sbjct: 3 VLITGATGGLGGAFARAL--KGHDLLLSGRRAGALAELAREVGARALPA-----DLADEL 55
Query: 75 DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 134
+A ++E G LD+LV+A + + ++ + LK+
Sbjct: 56 EAKALLE----EAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAA----FVLKH 107
Query: 135 LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIR 194
+ + + A Y +AAK A+++ + E +
Sbjct: 108 ARFQKGAR--------AVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELL-REGVH 158
Query: 195 VNGIAPGPIK 204
+ + +
Sbjct: 159 LVLVRLPAVA 168
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 4e-25
Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 34/234 (14%)
Query: 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRS-------AVAALHSLGIPA 63
K+ L+TG SG G + L G + R + A + + +
Sbjct: 4 SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRT 63
Query: 64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 123
+ L DV+ + R ++ I G++D+L++ A PAE +P F + +I+ +
Sbjct: 64 LEL--DVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLS 121
Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-----WYQIHVSAAKAAVDS 178
T + AL ++++ G +I IS++ T Y AAKAA+D+
Sbjct: 122 TQRVNRAALPHMRRQKHGL--------LIWISSSSSAGGTPPYLAPY----FAAKAAMDA 169
Query: 179 ITRSLALE---WGTDYAIRVNGIAPGPIK-DTAGVSKLAPEEIRSKATDYMAAY 228
I A E WG I + I PG T + + ++ +Y A
Sbjct: 170 IAVQYARELSRWG----IETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGP 219
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281 | Back alignment and structure |
|---|
Score = 96.2 bits (240), Expect = 2e-23
Identities = 54/199 (27%), Positives = 83/199 (41%), Gaps = 26/199 (13%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
KV L+TG SG G I+ G + RR L VAA + AI L DV
Sbjct: 6 KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAA-YPDRAEAISL--DVTD 62
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
E V + +G++D+LVN A + E+ + R + E+ G + L
Sbjct: 63 GERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALL 122
Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTAT----WYQIHVSAAKAAVDSITRSLALE-- 186
+ R + S G ++NIS+ + Y SA KAA++ ++ LA E
Sbjct: 123 PQM----RERGS----GSVVNISSFGGQLSFAGFSAY----SATKAALEQLSEGLADEVA 170
Query: 187 -WGTDYAIRVNGIAPGPIK 204
+G I+V + PG +
Sbjct: 171 PFG----IKVLIVEPGAFR 185
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276 | Back alignment and structure |
|---|
Score = 92.4 bits (230), Expect = 3e-22
Identities = 46/207 (22%), Positives = 79/207 (38%), Gaps = 14/207 (6%)
Query: 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMG-RRKTVLRSAVAALHSLGIPAIGLEGD 69
VAL+TGG GIG I L + + ++ R T ++AV L + G+ + D
Sbjct: 3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLD 62
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ + + + +G LD+LVN A F V ++ + GT +C
Sbjct: 63 IDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCT 122
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT--RSLALEW 187
E L +K GR ++N+S+ + A K ++IT + L
Sbjct: 123 ELLPLIKPQGR----------VVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMN 172
Query: 188 GTDYAIRVNGIAPGPIKDTA-GVSKLA 213
+ +A GV+K+
Sbjct: 173 KFVEDTKKGVHQKEGWPSSAYGVTKIG 199
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269 | Back alignment and structure |
|---|
Score = 91.5 bits (228), Expect = 7e-22
Identities = 60/285 (21%), Positives = 101/285 (35%), Gaps = 55/285 (19%)
Query: 8 DILKGKVALLTGGGSG--IGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAALHSLGIPA 63
+L GK L++G + I F I+ + GA + + R + + R L A
Sbjct: 3 GLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRIT----DRLPAKA 58
Query: 64 IGLEGDVRKREDAVRVVESTINHFG---KLDILVNAAAGNFLVPAEDLSPN--------G 112
LE DV+ E + G KLD +V++ F +P + N
Sbjct: 59 PLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIG--F-MPQTGMGINPFFDAPYAD 115
Query: 113 FRTVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----WYQI 167
I I S ++ M L + GG I+ + + + Y
Sbjct: 116 VSKGIHI-SAYSYASMAKALLPIMNPGG---------SIV-----GMDFDPSRAMPAYNW 160
Query: 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA 227
++ AK+A++S+ R +A E G +R N +A GPI+ A + +
Sbjct: 161 -MTVAKSALESVNRFVAREAGKY-GVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLL 218
Query: 228 YKFGE-----KW------DIAMAALYLASDAGKYVNGNTLIVDGG 261
+ + W +A L SD G+ + DGG
Sbjct: 219 EEGWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGG 263
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311 | Back alignment and structure |
|---|
Score = 90.0 bits (223), Expect = 5e-21
Identities = 48/250 (19%), Positives = 77/250 (30%), Gaps = 45/250 (18%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
M + K + A++TGG GIGFEI QL +G + + R T AV L +
Sbjct: 1 MPETCPNTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN 60
Query: 61 IP-AIGLEGDVRKREDAVR-VVESTINHFGKLDILVNAAAGNFLVPAED----------- 107
+ + DV + + + HFGKLDILVN A D
Sbjct: 61 HENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGE 120
Query: 108 -------------------LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSG 148
+ ++I+ G + + L+ S
Sbjct: 121 DSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQL--------SDS 172
Query: 149 GIIINISATLHYTATWYQIHVSAAKAAVDSIT----RSLALEWGTDYAIRVNGIAPGPIK 204
I+N+S++ D++T + D+ + P
Sbjct: 173 PRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSF 232
Query: 205 DTA-GVSKLA 213
A SK
Sbjct: 233 GAAYTTSKAC 242
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280 | Back alignment and structure |
|---|
Score = 89.2 bits (222), Expect = 6e-21
Identities = 60/281 (21%), Positives = 104/281 (37%), Gaps = 61/281 (21%)
Query: 9 ILKGKVALLTGGGSG--IGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAALHSLGIPAI 64
L GK L+TG S I + I+ + + GA +A +G+ K + A + A
Sbjct: 23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNP----AA 78
Query: 65 GLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRTV 116
L DV ++ + + LD +V++ A GNF+ + ++ GF
Sbjct: 79 VLPCDVISDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFI---DCVTREGFSIA 135
Query: 117 IEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHY-----TATWYQIHVS 170
+I S +F + E +K ++ L Y Y +
Sbjct: 136 HDI-SAYSFAALAKEGRSMMKNRN--------ASMV-----ALTYIGAEKAMPSYNT-MG 180
Query: 171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKF 230
AKA++++ R AL G D I+VN ++ GPIK A S +++ +
Sbjct: 181 VAKASLEATVRYTALALGED-GIKVNAVSAGPIKTLAA----------SGISNFKKMLDY 229
Query: 231 GEKW----------DIAMAALYLASDAGKYVNGNTLIVDGG 261
++ +L SD + G + VD G
Sbjct: 230 NAMVSPLKKNVDIMEVGNTVAFLCSDMATGITGEVVHVDAG 270
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250 | Back alignment and structure |
|---|
Score = 88.5 bits (220), Expect = 7e-21
Identities = 38/203 (18%), Positives = 74/203 (36%), Gaps = 17/203 (8%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIA-IMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
++TG GIG + QL K I R + + ++ + + L V
Sbjct: 4 GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPL--TVT 61
Query: 72 KREDAVRVVESTINHFG--KLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
+ V G L +L+ NA + + +++++ ++
Sbjct: 62 CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLT 121
Query: 129 HEALKYLKKGG---RGQASSSSGGIIINISA-----TLHYTATWYQIHVS--AAKAAVDS 178
+ L LK G S S +I IS+ T + + + ++ +KAA++
Sbjct: 122 QKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINM 181
Query: 179 ITRSLALEWGTDYAIRVNGIAPG 201
R+LA++ D + V PG
Sbjct: 182 FGRTLAVDLK-DDNVLVVNFCPG 203
|
| >4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282 | Back alignment and structure |
|---|
Score = 88.8 bits (221), Expect = 8e-21
Identities = 67/278 (24%), Positives = 108/278 (38%), Gaps = 54/278 (19%)
Query: 9 ILKGKVALLTGGGSG--IGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAAL-HSLGIP- 62
L+ K ++ G + I F ++ L + GA + R R + L L P
Sbjct: 29 NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKER---SRKELEKLLEQLNQPE 85
Query: 63 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFR 114
A + DV+ E+ + E G +D + ++ A G F + S GF
Sbjct: 86 AHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFS----ETSREGFL 141
Query: 115 TVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAK 173
+I S + + HEA K + +GG A++ GG A +Y + AK
Sbjct: 142 LAQDI-SSYSLTIVAHEAKKLMPEGGSIVATTYLGGE----FAVQNYNV------MGVAK 190
Query: 174 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEK 233
A++++ + LAL+ G D IRVN I+ GPI+ + + K E+
Sbjct: 191 ASLEANVKYLALDLGPD-NIRVNAISAGPIRTLSA----------KGVGGFNTILKEIEE 239
Query: 234 W----------DIAMAALYLASDAGKYVNGNTLIVDGG 261
++ A YL SD V G + VD G
Sbjct: 240 RAPLKRNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSG 277
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261 | Back alignment and structure |
|---|
Score = 88.0 bits (219), Expect = 1e-20
Identities = 66/279 (23%), Positives = 111/279 (39%), Gaps = 58/279 (20%)
Query: 9 ILKGKVALLTGGGSG--IGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGL 66
L GK AL+ G + +GF I+ +L + GA +A+ + + + A +LG A+
Sbjct: 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALG-GALLF 63
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRTVIE 118
DV + E+ + FG LD LV+A A G ++ D + +E
Sbjct: 64 RADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYI----DTRRQDWLLALE 119
Query: 119 IDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHY-----TATWYQIHVSAA 172
+ S + + + A L++GG GI+ TL Y Y + ++ A
Sbjct: 120 V-SAYSLVAVARRAEPLLREGG---------GIV-----TLTYYASEKVVPKYNV-MAIA 163
Query: 173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 232
KAA+++ R LA E G +RVN I+ GP++ A + Y
Sbjct: 164 KAALEASVRYLAYELGPK-GVRVNAISAGPVRTVAA----------RSIPGFTKMYDRVA 212
Query: 233 KW----------DIAMAALYLASDAGKYVNGNTLIVDGG 261
+ ++ L+L S + G + VD G
Sbjct: 213 QTAPLRRNITQEEVGNLGLFLLSPLASGITGEVVYVDAG 251
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* Length = 297 | Back alignment and structure |
|---|
Score = 88.6 bits (220), Expect = 1e-20
Identities = 69/319 (21%), Positives = 108/319 (33%), Gaps = 86/319 (26%)
Query: 10 LKGKVALLTGGGS--GIGFEISLQLGKHGAAIAI------------------------MG 43
L+GK A + G G G+ ++ L GA I + +
Sbjct: 6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLP 65
Query: 44 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN--------HFGKLDILVN 95
+ V L ++ + DV+ + T+ FG +DILV+
Sbjct: 66 DGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVH 125
Query: 96 AAA------GNFLVPAEDLSPNGFRTVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSG 148
+ A L + S G+ I S +F+ + L + GG
Sbjct: 126 SLANGPEVSKPLL----ETSRKGYLAAISA-SSYSFVSLLSHFLPIMNPGG--------- 171
Query: 149 GIIINISATLHYTAT-----WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI 203
I +L Y A+ Y +S+AKAA++S TR LA E G IRVN I+ GP+
Sbjct: 172 ASI-----SLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPL 226
Query: 204 KDTAGVSKLAPEEIRSKATDYMAAYKFGEKW----------DIAMAALYLASDAGKYVNG 253
A ++ ++ AA +L S + G
Sbjct: 227 GSRAA----------KAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITG 276
Query: 254 NTLIVDGG-NWLSNPRDLP 271
T+ VD G N + D P
Sbjct: 277 ATIYVDNGLNSMGVALDSP 295
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* Length = 315 | Back alignment and structure |
|---|
Score = 88.7 bits (220), Expect = 1e-20
Identities = 73/304 (24%), Positives = 114/304 (37%), Gaps = 71/304 (23%)
Query: 10 LKGKVALLTGGGS--GIGFEISLQLGKHGAAIAI------------------------MG 43
L+G+ A + G G G+ I+ L GA +A+ +
Sbjct: 7 LRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLP 66
Query: 44 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN--------HFGKLDILVN 95
+ + V L + + D++ + V TI G +DILV+
Sbjct: 67 DGSLIEFAGVYPLDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVH 126
Query: 96 AAA------GNFLVPAEDLSPNGFRTVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSG 148
+ A L + S G+ S +F+ + + +GG
Sbjct: 127 SLANGPEVTKPLL----ETSRKGYLAASSN-SAYSFVSLLQHFGPIMNEGG--------- 172
Query: 149 GIIINISATLHYTAT-----WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI 203
+ TL Y A Y +S+AKAA++S TR+LA E G Y +RVN I+ GP+
Sbjct: 173 SAV-----TLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPL 227
Query: 204 KDTA--GVSKLAPEEIRSKATDYMAAYKFGEK----WDIAMAALYLASDAGKYVNGNTLI 257
K A + K + A DY + D+ AAL+L S + V+G TL
Sbjct: 228 KSRAASAIGKSGEKSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLY 287
Query: 258 VDGG 261
VD G
Sbjct: 288 VDNG 291
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266 | Back alignment and structure |
|---|
Score = 87.6 bits (218), Expect = 2e-20
Identities = 60/278 (21%), Positives = 105/278 (37%), Gaps = 54/278 (19%)
Query: 9 ILKGKVALLTGGGSG--IGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAAL-HSLGI-P 62
L+G+ ++ G + I + I+ L + GA + G R L +V L +L
Sbjct: 4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGER---LEKSVHELAGTLDRND 60
Query: 63 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFR 114
+I L DV + S G + + + A G +L + + +GF
Sbjct: 61 SIILPCDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYL----NTNRDGFL 116
Query: 115 TVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAK 173
I S + + A + +GG + GG +Y + AK
Sbjct: 117 LAHNI-SSYSLTAVVKAARPMMTEGGSIVTLTYLGGE----LVMPNYNV------MGVAK 165
Query: 174 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEK 233
A++D+ + LA + G + IRVN I+ GPI+ + +D+ + K E+
Sbjct: 166 ASLDASVKYLAADLGKE-NIRVNSISAGPIRTLSA----------KGISDFNSILKDIEE 214
Query: 234 W----------DIAMAALYLASDAGKYVNGNTLIVDGG 261
++ A +L SD + + G L VD G
Sbjct: 215 RAPLRRTTTPEEVGDTAAFLFSDMSRGITGENLHVDSG 252
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293 | Back alignment and structure |
|---|
Score = 87.7 bits (218), Expect = 3e-20
Identities = 69/280 (24%), Positives = 103/280 (36%), Gaps = 54/280 (19%)
Query: 6 KGDILKGKVALLTGGGSG--IGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAAL-HSLG 60
+ +L+GK L+ G + I + I+ + GA +A G L+ V L LG
Sbjct: 25 QSGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDA---LKKRVEPLAEELG 81
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNG 112
DV V E+ +GKLD LV+A G ++ D S
Sbjct: 82 AFVA-GHCDVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYI----DTSEAN 136
Query: 113 FRTVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171
F + I SV + + A K + GG + G +Y +
Sbjct: 137 FTNTMLI-SVYSLTAVSRRAEKLMADGGSILTLTYYGAE----KVMPNYNV------MGV 185
Query: 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 231
AKAA+++ + LA++ G IRVN I+ GPIK A S D+ K+
Sbjct: 186 AKAALEASVKYLAVDLGPQ-NIRVNAISAGPIKTLAA----------SGIGDFRYILKWN 234
Query: 232 EKW----------DIAMAALYLASDAGKYVNGNTLIVDGG 261
E ++ LY SD + V G D G
Sbjct: 235 EYNAPLRRTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSG 274
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275 | Back alignment and structure |
|---|
Score = 87.3 bits (217), Expect = 3e-20
Identities = 72/282 (25%), Positives = 108/282 (38%), Gaps = 64/282 (22%)
Query: 9 ILKGKVALLTGGGSG--IGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAAL-HSLGIPA 63
LKGK L+ G + I + I+ GA +A + L V + L P
Sbjct: 3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES---LEKRVRPIAQELNSPY 59
Query: 64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRT 115
+ E DV K E + S G LD +V++ A G+ L + S + F T
Sbjct: 60 V-YELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLL----ETSKSAFNT 114
Query: 116 VIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHY-----TATWYQIHV 169
+EI SV + I + + L G ++ TL Y Y + +
Sbjct: 115 AMEI-SVYSLIELTNTLKPLLNNGA---------SVL-----TLSYLGSTKYMAHYNV-M 158
Query: 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK 229
AKAA++S R LA++ G IRVN ++ GPI+ A S D+ K
Sbjct: 159 GLAKAALESAVRYLAVDLGKH-HIRVNALSAGPIRTLAS----------SGIADFRMILK 207
Query: 230 FGEKW----------DIAMAALYLASDAGKYVNGNTLIVDGG 261
+ E ++ A +YL S V+G VD G
Sbjct: 208 WNEINAPLRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAG 249
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296 | Back alignment and structure |
|---|
Score = 87.7 bits (218), Expect = 3e-20
Identities = 67/280 (23%), Positives = 112/280 (40%), Gaps = 54/280 (19%)
Query: 6 KGDILKGKVALLTGGGSG--IGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAAL-HSLG 60
G +++GK ++ G + + + I+ + GA +A+ + + V L SLG
Sbjct: 24 TGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSET---FKKRVDPLAESLG 80
Query: 61 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNG 112
+ + DV E + + +G LD +V+A A G ++ D S
Sbjct: 81 VKLT-VPCDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYV----DTSLGN 135
Query: 113 FRTVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171
F T + I S +F + +A + GG S G HY +
Sbjct: 136 FLTSMHI-SCYSFTYIASKAEPLMTNGGSILTLSYYGAE----KVVPHYNV------MGV 184
Query: 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 231
KAA+++ + LA++ G IRVN I+ GP++ A S +D+ +
Sbjct: 185 CKAALEASVKYLAVDLGKQ-QIRVNAISAGPVRTLAS----------SGISDFHYILTWN 233
Query: 232 EKW----------DIAMAALYLASDAGKYVNGNTLIVDGG 261
+ D+ AALYL SD G+ G T+ VD G
Sbjct: 234 KYNSPLRRNTTLDDVGGAALYLLSDLGRGTTGETVHVDCG 273
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265 | Back alignment and structure |
|---|
Score = 86.8 bits (216), Expect = 3e-20
Identities = 62/277 (22%), Positives = 104/277 (37%), Gaps = 53/277 (19%)
Query: 9 ILKGKVALLTGGGSG--IGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAAL-HSLGIPA 63
L GK L+TG S I + I+ + + GA +A + L+ V LG
Sbjct: 6 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDK---LKGRVEEFAAQLGSDI 62
Query: 64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRT 115
+ L+ DV + + + K D V++ G+++ ++ GF+
Sbjct: 63 V-LQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYV---NAVTREGFKI 118
Query: 116 VIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKA 174
+I S +F+ M L G S G A +Y + AKA
Sbjct: 119 AHDI-SSYSFVAMAKACRSMLNPGSALLTLSYLGAE----RAIPNYNV------MGLAKA 167
Query: 175 AVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW 234
++++ R +A G + +RVN I+ GPI+ A S D+ E
Sbjct: 168 SLEANVRYMANAMGPE-GVRVNAISAGPIRTLAA----------SGIKDFRKMLAHCEAV 216
Query: 235 ----------DIAMAALYLASDAGKYVNGNTLIVDGG 261
D+ +A +L SD ++G + VDGG
Sbjct: 217 TPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGG 253
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271 | Back alignment and structure |
|---|
Score = 86.9 bits (216), Expect = 4e-20
Identities = 68/284 (23%), Positives = 98/284 (34%), Gaps = 53/284 (18%)
Query: 2 ESPFKGDILKGKVALLTGGGSG--IGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAAL- 56
L GK LLTG S I + I+ + GA +A +G R + +
Sbjct: 4 HHHHHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDR---FKDRITEFA 60
Query: 57 HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDL 108
G + DV + S H+ LD LV++ G+FL + L
Sbjct: 61 AEFGSELV-FPCDVADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFL---DGL 116
Query: 109 SPNGFRTVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167
+ FR +I S +F + AL L S G A +Y
Sbjct: 117 TRENFRIAHDI-SAYSFPALAKAALPMLSDDASLLTLSYLGAE----RAIPNYNT----- 166
Query: 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA 227
+ AKAA+++ R LA+ G +RVN I+ GPIK A S +
Sbjct: 167 -MGLAKAALEASVRYLAVSLGAK-GVRVNAISAGPIKTLAA----------SGIKSFGKI 214
Query: 228 YKFGEKW----------DIAMAALYLASDAGKYVNGNTLIVDGG 261
F E + A +L SD V + VD G
Sbjct: 215 LDFVESNSPLKRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSG 258
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} Length = 319 | Back alignment and structure |
|---|
Score = 87.2 bits (216), Expect = 5e-20
Identities = 77/334 (23%), Positives = 121/334 (36%), Gaps = 86/334 (25%)
Query: 4 PFKGDILKGKVALLTGGGS--GIGFEISLQLGKHGAAIAI-------------------- 41
P D L+GK A + G G G+ I L GA + +
Sbjct: 2 PLPVD-LRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFE 60
Query: 42 -----------------MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84
+ ++ + L ++ + +V + V TI
Sbjct: 61 QDSFYAQEPSSKVAAEAAEKPVDLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTI 120
Query: 85 N--------HFGKLDILVNAAA------GNFLVPAEDLSPNGFRTVIEIDSVGTFI-MCH 129
+ G++DILV++ A L S G+ + S +F+ +
Sbjct: 121 SEVAEAVRADVGQIDILVHSLANGPEVTKPLL----QTSRKGYLAAVSS-SSYSFVSLLQ 175
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTAT-----WYQIHVSAAKAAVDSITRSLA 184
L +K+GG + L Y A+ Y +S+AKAA++S R+LA
Sbjct: 176 HFLPLMKEGG---------SAL-----ALSYIASEKVIPGYGGGMSSAKAALESDCRTLA 221
Query: 185 LEWGTDYAIRVNGIAPGPIKDTA--GVSKLAPEEIRSKATDYMAAYKFGEK----WDIAM 238
E G A+RVN I+ GP+K A + K + A DY A +K D+
Sbjct: 222 FEAGRARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGR 281
Query: 239 AALYLASDAGKYVNGNTLIVDGG-NWLSNPRDLP 271
AAL+L S + V G TL VD G + + D
Sbjct: 282 AALFLLSPLARAVTGATLYVDNGLHAMGQALDSK 315
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285 | Back alignment and structure |
|---|
Score = 86.1 bits (214), Expect = 8e-20
Identities = 68/282 (24%), Positives = 113/282 (40%), Gaps = 63/282 (22%)
Query: 9 ILKGKVALLTGGGSG--IGFEISLQLGKHGAAIAI--MGRRKTVLRSAVAAL-HSLGIPA 63
+L+GK AL+TG + I + I+ + GA +A + L V + G
Sbjct: 18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK---LEKRVREIAKGFGSDL 74
Query: 64 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA--------GNFLVPAEDLSPNGFRT 115
+ ++ DV ED + + ++G LDI+V++ A G + D S GF+
Sbjct: 75 V-VKCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVI----DTSREGFKI 129
Query: 116 VIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGIIINISATLHY-----TATWYQIHV 169
++I SV + I + E L ++ G I+ TL Y Y + +
Sbjct: 130 AMDI-SVYSLIALTRELLPLMEGRN--------GAIV-----TLSYYGAEKVVPHYNV-M 174
Query: 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK 229
AKAA++S R LA + R+N I+ GP+K A T + +
Sbjct: 175 GIAKAALESTVRYLAYDIAKH-GHRINAISAGPVKTLAA----------YSITGFHLLME 223
Query: 230 FGEKW----------DIAMAALYLASDAGKYVNGNTLIVDGG 261
K D+ A++L SD + + G + VD G
Sbjct: 224 HTTKVNPFGKPITIEDVGDTAVFLCSDWARAITGEVVHVDNG 265
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 84.0 bits (208), Expect = 4e-19
Identities = 37/202 (18%), Positives = 67/202 (33%), Gaps = 16/202 (7%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIA--IMGRRKTVLRSAVAALHSLGIPAIGLEGDV 70
L+TG G+G + L R + L LE D+
Sbjct: 22 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDL 81
Query: 71 RKREDAVRVVE--STINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
R + ++V + L++L NA + ++ ++V ++
Sbjct: 82 RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIML 141
Query: 128 CHEALKYLKKGG---RGQASSSSGGIIINISA-----TLHYTATWYQIHVSAAKAAVDSI 179
L LKK Q IIN+S+ + Y S K+A+++
Sbjct: 142 AKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTS--KSALNAA 199
Query: 180 TRSLALEWGTDYAIRVNGIAPG 201
T+SL+++ I + PG
Sbjct: 200 TKSLSVDLYPQ-RIMCVSLHPG 220
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 80.1 bits (198), Expect = 2e-17
Identities = 50/205 (24%), Positives = 84/205 (40%), Gaps = 31/205 (15%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAA----IAIMGRRKTV--LRSAVAALHSLGIPAIGL 66
V L+TG SGIG ++++L + A + KT L A AL L
Sbjct: 3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
+ DVR + E G++D+LV A L P E L + +V++++ VGT
Sbjct: 63 QLDVRDSKSVAAARERVT--EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVR 120
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----WYQIHVSAAKAAVDSITRS 182
M L +K+ G G+ ++ + Y A+K A++ + S
Sbjct: 121 MLQAFLPDMKRRGSGR--------VLVTGSVGGLMGLPFNDVY----CASKFALEGLCES 168
Query: 183 LALE---WGTDYAIRVNGIAPGPIK 204
LA+ +G + ++ I GP+
Sbjct: 169 LAVLLLPFG----VHLSLIECGPVH 189
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... Length = 329 | Back alignment and structure |
|---|
Score = 73.4 bits (180), Expect = 4e-15
Identities = 63/339 (18%), Positives = 106/339 (31%), Gaps = 108/339 (31%)
Query: 12 GKVALLTGGGS--GIGFEISLQLGKHGAAIAI------MGRRKTVLR------------- 50
+ + G G G G+ I+ +L K I +
Sbjct: 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKD 61
Query: 51 -------------SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA 97
S A ++ + V +GK+++LV++
Sbjct: 62 KKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSL 121
Query: 98 A------GNFLVPAEDLSPNGFRTVIEIDSVGTFI-MCHEALKYLKKGGRGQASSSSGGI 150
A + L + S G+ + S + I +C + +K I
Sbjct: 122 ANAKEVQKDLL----NTSRKGYLDALSK-SSYSLISLCKYFVNIMKPQS---------SI 167
Query: 151 IINISATLHYTAT-----WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK- 204
I +L Y A+ Y +S+AKAA++S TR LA G +Y IR+N I+ GP+K
Sbjct: 168 I-----SLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKS 222
Query: 205 --------------------------------DTAGVSKLAPEEIRSKATDYMAAYKFGE 232
+ +G + T A ++ E
Sbjct: 223 RAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSE 282
Query: 233 KW----------DIAMAALYLASDAGKYVNGNTLIVDGG 261
K+ DI A +L S + + G T+ VD G
Sbjct: 283 KYAPLRQKLLSTDIGSVASFLLSRESRAITGQTIYVDNG 321
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287 | Back alignment and structure |
|---|
Score = 58.4 bits (141), Expect = 5e-10
Identities = 17/103 (16%), Positives = 34/103 (33%), Gaps = 9/103 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+KGK A++ G +G + L GA + + GR+ ++A +++ +
Sbjct: 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF-KVNVTAAE 175
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAA-AGNFLVPAEDLSPN 111
V+ + A G L+P
Sbjct: 176 TADDASRAEAVKGA-------HFVFTAGAIGLELLPQAAWQNE 211
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 7e-07
Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 21/110 (19%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+ ++TG SG+G + +L + GA + + R +A + G
Sbjct: 14 FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAART----------MAGQ 63
Query: 70 VRKRE------DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGF 113
V RE +VR + D+L+N AG VP L+ +GF
Sbjct: 64 VEVRELDLQDLSSVR---RFADGVSGADVLIN-NAGIMAVP-YALTVDGF 108
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} Length = 422 | Back alignment and structure |
|---|
Score = 46.3 bits (109), Expect = 5e-06
Identities = 41/301 (13%), Positives = 75/301 (24%), Gaps = 56/301 (18%)
Query: 12 GKVALLTGGGSGIGFEISLQL-GKHGAAIAIMGRRKTVLRSAVAAL------------HS 58
K L+ G SG G + GA + K S +
Sbjct: 61 PKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKA 120
Query: 59 LGIPAIGLEGDVRKREDAVRVVESTINHFG-KLDILVNAAAG------------------ 99
G+ + + GD +V+E G ++D++V + A
Sbjct: 121 AGLYSKSINGDAFSDAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKP 180
Query: 100 --------NFLVPAEDLSPNGFRTVIEIDSVGT-FIMCHEALKYLKKGGRGQASSSSGGI 150
+ + + T +M + + G + G
Sbjct: 181 IGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQDWELWIDALEGAGVLADGAR 240
Query: 151 IINISATLHYTATW---YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 207
+ S + TW + + AK +D + L + N + A
Sbjct: 241 SVAFS-YIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLA-KHGGGANVAVLKSVVTQA 298
Query: 208 GVSKLAPEEIRSKATDYMAAYKFGEKW----DIAMAALYLASDAGKYVNGNTLIVDGGNW 263
+ I YK ++ L + +G VD N
Sbjct: 299 SAA------IPVMPLYISMVYKIMKEKGLHEGTIEQLDRLFRERLYRQDGQPAEVDEQNR 352
Query: 264 L 264
L
Sbjct: 353 L 353
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 298 | |||
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 100.0 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 100.0 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 100.0 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 100.0 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 100.0 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 100.0 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 100.0 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 100.0 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 100.0 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 100.0 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 100.0 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 100.0 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 100.0 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 100.0 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 100.0 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 100.0 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 100.0 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 100.0 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 100.0 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 100.0 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 100.0 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 100.0 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 100.0 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 100.0 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 100.0 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 100.0 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 100.0 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 100.0 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 100.0 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 100.0 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 100.0 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 100.0 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 100.0 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 100.0 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 100.0 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 100.0 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 100.0 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 100.0 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 100.0 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 100.0 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 100.0 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 100.0 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 100.0 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 100.0 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 100.0 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 100.0 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 100.0 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 100.0 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 100.0 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 100.0 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 100.0 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 100.0 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 100.0 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 100.0 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 100.0 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 100.0 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 100.0 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 100.0 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 100.0 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 100.0 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 100.0 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 100.0 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 100.0 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 100.0 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 100.0 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 100.0 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 100.0 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 100.0 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 100.0 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 100.0 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 100.0 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 100.0 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 100.0 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 100.0 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 100.0 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 100.0 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 100.0 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 100.0 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 100.0 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 100.0 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 100.0 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 100.0 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 100.0 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 100.0 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 100.0 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 100.0 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 100.0 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 100.0 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 100.0 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 100.0 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 100.0 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 100.0 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 100.0 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 100.0 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 100.0 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 100.0 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 100.0 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 100.0 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 100.0 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 100.0 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 100.0 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 100.0 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 100.0 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 100.0 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 100.0 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 100.0 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 100.0 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 100.0 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 100.0 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 100.0 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 100.0 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 100.0 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 100.0 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 100.0 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 100.0 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 100.0 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 100.0 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 100.0 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 100.0 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 100.0 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 100.0 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 100.0 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 100.0 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 100.0 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 100.0 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 100.0 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 100.0 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 100.0 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 100.0 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 100.0 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 100.0 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 100.0 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 100.0 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 100.0 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 100.0 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 100.0 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 100.0 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 100.0 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 100.0 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 100.0 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 100.0 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 100.0 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 100.0 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 100.0 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 100.0 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 100.0 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 100.0 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 100.0 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 100.0 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 100.0 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 100.0 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 100.0 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 100.0 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 100.0 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 100.0 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 100.0 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 100.0 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 100.0 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 100.0 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 100.0 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 100.0 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 100.0 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 100.0 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 100.0 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 100.0 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 100.0 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 100.0 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 100.0 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 100.0 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 100.0 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 100.0 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 100.0 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 100.0 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 100.0 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 100.0 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 100.0 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 100.0 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 100.0 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 100.0 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 100.0 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 100.0 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 100.0 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 100.0 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 100.0 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 100.0 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 100.0 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 100.0 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 100.0 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 100.0 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 100.0 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 100.0 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 100.0 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 100.0 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 100.0 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 100.0 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 100.0 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 100.0 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 100.0 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 100.0 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 100.0 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 100.0 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 100.0 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 100.0 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 100.0 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 100.0 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 100.0 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 100.0 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 100.0 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 100.0 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 100.0 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 99.97 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.97 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.96 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.95 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.95 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.95 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.94 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.93 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.93 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.93 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.93 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.93 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.92 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.92 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.92 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.92 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.92 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.92 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.91 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.91 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.91 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.91 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.91 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.91 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 99.91 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.9 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.9 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.9 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.9 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.9 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.9 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.9 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.9 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 99.9 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.9 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.89 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.89 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.89 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.89 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.89 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.89 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.89 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.89 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.89 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.89 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.88 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.88 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.88 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.88 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.87 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.87 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.87 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.87 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.87 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.87 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.87 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.86 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.86 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.86 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.85 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.85 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.84 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.84 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.84 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.84 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.83 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.83 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.83 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.83 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.82 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.82 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.82 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.82 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.81 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.81 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.81 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.8 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.8 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.8 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.8 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.79 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.77 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.74 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.74 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.73 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.72 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.71 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.7 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.7 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.69 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.65 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.64 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.64 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.61 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.6 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.49 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 99.28 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.11 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 99.11 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 98.91 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 98.88 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 98.83 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 98.72 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 98.57 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 98.55 | |
| 2o7s_A | 523 | DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat | 98.53 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 98.52 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 98.51 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 98.5 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 98.49 | |
| 3ond_A | 488 | Adenosylhomocysteinase; plant protein, enzyme-subs | 98.44 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 98.39 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 98.36 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 98.35 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 98.33 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 98.29 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 98.23 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 98.22 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 98.21 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 98.18 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 98.17 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 98.13 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 98.12 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 98.12 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 98.11 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 98.11 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 98.11 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 98.09 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 97.99 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 97.99 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 97.98 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 97.94 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 97.92 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 97.86 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 97.85 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 97.85 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 97.84 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 97.82 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 97.8 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 97.79 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 97.78 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 97.77 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 97.77 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 97.72 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 97.69 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 97.66 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 97.63 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 97.63 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 97.61 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 97.56 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 97.55 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 97.53 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 97.51 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 97.51 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 97.5 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 97.49 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 97.49 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 97.49 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 97.43 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 97.42 | |
| 1p9o_A | 313 | Phosphopantothenoylcysteine synthetase; ligase; 2. | 97.41 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 97.41 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 97.41 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 97.37 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 97.36 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 97.29 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 97.27 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 97.24 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 97.19 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 97.17 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 97.15 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 97.13 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 97.12 | |
| 1gu7_A | 364 | Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s | 97.11 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 97.08 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 96.96 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 96.93 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 96.93 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 96.91 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 96.88 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 96.85 | |
| 1pl8_A | 356 | Human sorbitol dehydrogenase; NAD, oxidoreductase; | 96.84 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 96.83 | |
| 1cdo_A | 374 | Alcohol dehydrogenase; oxidoreductase, oxidoreduct | 96.83 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 96.8 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 96.79 | |
| 1h2b_A | 359 | Alcohol dehydrogenase; oxidoreductase, archaea, hy | 96.79 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 96.78 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 96.76 | |
| 3fbt_A | 282 | Chorismate mutase and shikimate 5-dehydrogenase fu | 96.73 | |
| 2jhf_A | 374 | Alcohol dehydrogenase E chain; oxidoreductase, met | 96.72 | |
| 2fzw_A | 373 | Alcohol dehydrogenase class III CHI chain; S-nitro | 96.71 | |
| 3iup_A | 379 | Putative NADPH:quinone oxidoreductase; YP_296108.1 | 96.71 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 96.7 | |
| 4dvj_A | 363 | Putative zinc-dependent alcohol dehydrogenase Pro; | 96.69 | |
| 1e3i_A | 376 | Alcohol dehydrogenase, class II; HET: NAD; 2.08A { | 96.68 | |
| 1zsy_A | 357 | Mitochondrial 2-enoyl thioester reductase; medium- | 96.64 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 96.63 | |
| 2h6e_A | 344 | ADH-4, D-arabinose 1-dehydrogenase; rossman fold, | 96.63 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 96.62 | |
| 3rui_A | 340 | Ubiquitin-like modifier-activating enzyme ATG7; au | 96.61 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 96.6 | |
| 3tum_A | 269 | Shikimate dehydrogenase family protein; rossmann-f | 96.59 | |
| 1vj0_A | 380 | Alcohol dehydrogenase, zinc-containing; TM0436, st | 96.58 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 96.55 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 96.55 | |
| 1leh_A | 364 | Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi | 96.54 | |
| 4h7p_A | 345 | Malate dehydrogenase; ssgcid, structural G seattle | 96.53 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 96.51 | |
| 3uko_A | 378 | Alcohol dehydrogenase class-3; alcohol dehydrogena | 96.51 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 96.46 | |
| 4ej6_A | 370 | Putative zinc-binding dehydrogenase; structural ge | 96.46 | |
| 1p0f_A | 373 | NADP-dependent alcohol dehydrogenase; ADH topology | 96.45 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 96.45 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 96.41 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 96.38 | |
| 3tl2_A | 315 | Malate dehydrogenase; center for structural genomi | 96.37 | |
| 3p2o_A | 285 | Bifunctional protein fold; structural genomics, ce | 96.3 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 96.29 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 96.22 | |
| 1oju_A | 294 | MDH, malate dehydrogenase; hyperthermophilic, oxid | 96.2 | |
| 4gsl_A | 615 | Ubiquitin-like modifier-activating enzyme ATG7; ub | 96.18 | |
| 3fpc_A | 352 | NADP-dependent alcohol dehydrogenase; oxydoreducta | 96.12 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 96.1 | |
| 3d1l_A | 266 | Putative NADP oxidoreductase BF3122; structural ge | 96.07 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 96.06 | |
| 3ngx_A | 276 | Bifunctional protein fold; methylenetetrahydrofola | 96.05 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 96.05 | |
| 1f8f_A | 371 | Benzyl alcohol dehydrogenase; rossmann fold, oxido | 96.05 | |
| 1kol_A | 398 | Formaldehyde dehydrogenase; oxidoreductase; HET: N | 96.03 | |
| 4a5o_A | 286 | Bifunctional protein fold; oxidoreductase, hydrola | 95.98 | |
| 1f0y_A | 302 | HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive | 95.95 | |
| 4aj2_A | 331 | L-lactate dehydrogenase A chain; oxidoreductase-in | 95.93 | |
| 4a26_A | 300 | Putative C-1-tetrahydrofolate synthase, cytoplasm; | 95.92 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 95.89 | |
| 3h5n_A | 353 | MCCB protein; ubiquitin-activating enzyme, microci | 95.88 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 95.88 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 95.88 | |
| 2dph_A | 398 | Formaldehyde dismutase; dismutation of aldehydes, | 95.84 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 95.84 | |
| 3l07_A | 285 | Bifunctional protein fold; structural genomics, ID | 95.83 | |
| 2hk9_A | 275 | Shikimate dehydrogenase; shikimate pathway, drug d | 95.82 | |
| 2d5c_A | 263 | AROE, shikimate 5-dehydrogenase; substrate, dimer, | 95.8 | |
| 3d0o_A | 317 | L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly | 95.79 | |
| 1b0a_A | 288 | Protein (fold bifunctional protein); folate, dehyd | 95.74 | |
| 3tri_A | 280 | Pyrroline-5-carboxylate reductase; amino acid bios | 95.73 | |
| 3jv7_A | 345 | ADH-A; dehydrogenase, nucleotide binding, rossmann | 95.72 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 95.71 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 95.69 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 95.68 | |
| 3aoe_E | 419 | Glutamate dehydrogenase; rossmann fold, NADH, oxid | 95.68 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 95.68 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 95.62 | |
| 3lk7_A | 451 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; a | 95.62 | |
| 2raf_A | 209 | Putative dinucleotide-binding oxidoreductase; NP_7 | 95.57 | |
| 1tt7_A | 330 | YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st | 95.57 | |
| 1a4i_A | 301 | Methylenetetrahydrofolate dehydrogenase / methenyl | 95.55 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 95.5 | |
| 1ez4_A | 318 | Lactate dehydrogenase; rossmann fold, oxidoreducta | 95.5 | |
| 3nx4_A | 324 | Putative oxidoreductase; csgid, structural genomic | 95.48 | |
| 3hhp_A | 312 | Malate dehydrogenase; MDH, citric acid cycle, TCA | 95.45 | |
| 3nep_X | 314 | Malate dehydrogenase; halophIle, molecular adpatat | 95.44 | |
| 2zqz_A | 326 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ro | 95.44 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 95.31 | |
| 1y6j_A | 318 | L-lactate dehydrogenase; southeast collaboratory f | 95.23 | |
| 1ldn_A | 316 | L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA | 95.2 | |
| 3ldh_A | 330 | Lactate dehydrogenase; oxidoreductase, CHOH donor, | 95.2 | |
| 2x0j_A | 294 | Malate dehydrogenase; oxidoreductase, hyperthermop | 95.18 | |
| 3orq_A | 377 | N5-carboxyaminoimidazole ribonucleotide synthetas; | 95.14 | |
| 3q2o_A | 389 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 95.13 | |
| 4huj_A | 220 | Uncharacterized protein; PSI-biology, nysgrc, stru | 95.11 | |
| 1npy_A | 271 | Hypothetical shikimate 5-dehydrogenase-like protei | 95.11 | |
| 2pv7_A | 298 | T-protein [includes: chorismate mutase (EC 5.4.99 | 95.09 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 95.07 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 95.05 | |
| 3vh1_A | 598 | Ubiquitin-like modifier-activating enzyme ATG7; au | 95.0 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 94.99 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 94.94 | |
| 2dpo_A | 319 | L-gulonate 3-dehydrogenase; structural genomics, N | 94.91 | |
| 2v6b_A | 304 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ra | 94.88 | |
| 1t2d_A | 322 | LDH-P, L-lactate dehydrogenase; ternary complex, o | 94.86 |
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-59 Score=398.32 Aligned_cols=250 Identities=28% Similarity=0.388 Sum_probs=236.2
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
+.+|+||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++.+.+.++.+++||++|+++++++++++.++
T Consensus 4 ~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (255)
T 4g81_D 4 LFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAE 83 (255)
T ss_dssp TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
||++|+||||||+...+++.+.+.++|++++++|+.++|+++|+++|+|.++.. +|+||++||..+..+.+..
T Consensus 84 ~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~-------~G~IVnisS~~~~~~~~~~ 156 (255)
T 4g81_D 84 GIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNS-------GGKIINIGSLTSQAARPTV 156 (255)
T ss_dssp TCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-------CEEEEEECCGGGTSBCTTC
T ss_pred CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccC-------CCEEEEEeehhhcCCCCCc
Confidence 999999999999998899999999999999999999999999999999976531 6999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
..|++||+|+.+|+|+++.|++ ++|||||+|+||+++|++......+++..+.+....|++|+++|+|+|++++||+|+
T Consensus 157 ~~Y~asKaal~~ltr~lA~ela-~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~ 235 (255)
T 4g81_D 157 APYTAAKGGIKMLTCSMAAEWA-QFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSK 235 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSG
T ss_pred hhHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCc
Confidence 9999999999999999999998 889999999999999998766555677778888899999999999999999999999
Q ss_pred CCCCccccEEEeCCCCCC
Q 022386 247 AGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 247 ~~~~~~G~~i~~dgG~~~ 264 (298)
.++|+||+.|.+|||++.
T Consensus 236 ~a~~iTG~~i~VDGG~~A 253 (255)
T 4g81_D 236 ASDYINGQIIYVDGGWLA 253 (255)
T ss_dssp GGTTCCSCEEEESTTGGG
T ss_pred hhCCCcCCEEEECCCeEe
Confidence 999999999999999753
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-59 Score=394.35 Aligned_cols=248 Identities=27% Similarity=0.461 Sum_probs=229.4
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
++|+||++|||||++|||+++|+.|+++|++|++++|+.+.++++.+++.+.+.++.+++||++|+++++++++++.++|
T Consensus 3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccEEEECCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 88 GKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 88 ~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
|+||+||||||+.. ..++.+.+.++|++++++|+.++|+++|+++|+|++++ +|+|||+||..+..+.+..
T Consensus 83 G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~--------~G~IVnisS~~g~~~~~~~ 154 (254)
T 4fn4_A 83 SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQG--------KGVIVNTASIAGIRGGFAG 154 (254)
T ss_dssp SCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTCSSSSC
T ss_pred CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--------CcEEEEEechhhcCCCCCC
Confidence 99999999999764 47889999999999999999999999999999999887 7999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCCh-HH-HHHHHhhhccCCCCCCHHHHHHHHHHhc
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EE-IRSKATDYMAAYKFGEKWDIAMAALYLA 244 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~dva~~~~~L~ 244 (298)
..|++||+|+.+|+|+++.|++ ++|||||+|+||+++|++......+ +. .........|.+|+.+|+|+|++++||+
T Consensus 155 ~~Y~asKaal~~ltr~lA~ela-~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pediA~~v~fLa 233 (254)
T 4fn4_A 155 APYTVAKHGLIGLTRSIAAHYG-DQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLA 233 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHh
Confidence 9999999999999999999998 8899999999999999976554433 22 2233444567899999999999999999
Q ss_pred CCCCCCccccEEEeCCCCCC
Q 022386 245 SDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 245 s~~~~~~~G~~i~~dgG~~~ 264 (298)
|+.++|+||+.|.+|||.++
T Consensus 234 Sd~a~~iTG~~i~VDGG~t~ 253 (254)
T 4fn4_A 234 SDEASFVNGDAVVVDGGLTV 253 (254)
T ss_dssp SGGGTTCCSCEEEESTTGGG
T ss_pred CchhcCCcCCEEEeCCCccc
Confidence 99999999999999999875
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-57 Score=381.04 Aligned_cols=243 Identities=30% Similarity=0.362 Sum_probs=223.6
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
+.+|+||++|||||++|||+++|+.|+++|++|++++|+.. ++..+.+.+.+.++.+++||++|+++++++++
T Consensus 4 ~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~----- 76 (247)
T 4hp8_A 4 PFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDGGNASALLIDFADPLAAKDSFT----- 76 (247)
T ss_dssp TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTTCCEEEEECCTTSTTTTTTSST-----
T ss_pred CcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhCCcEEEEEccCCCHHHHHHHHH-----
Confidence 35799999999999999999999999999999999999865 46677888889999999999999999888764
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
++++|+||||||+....++.+.+.++|++++++|+.++|+++|+++|+|.+++. +|+||++||..+..+.+..
T Consensus 77 ~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~-------~G~IVnisS~~~~~g~~~~ 149 (247)
T 4hp8_A 77 DAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGR-------SGKVVNIASLLSFQGGIRV 149 (247)
T ss_dssp TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-------CEEEEEECCGGGTSCCSSC
T ss_pred hCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCC-------CcEEEEEechhhCCCCCCC
Confidence 589999999999988899999999999999999999999999999999987632 6999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
.+|++||+|+.+|+|+++.||+ ++|||||+|+||+++|++......+++..+.+....|++|+++|+|+|.+++||+|+
T Consensus 150 ~~Y~asKaav~~ltr~lA~Ela-~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd 228 (247)
T 4hp8_A 150 PSYTAAKHGVAGLTKLLANEWA-AKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVFLSSA 228 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSSCBCTHHHHHHHHHHTSG
T ss_pred hHHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCc
Confidence 9999999999999999999999 889999999999999998765555566677788889999999999999999999999
Q ss_pred CCCCccccEEEeCCCCCC
Q 022386 247 AGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 247 ~~~~~~G~~i~~dgG~~~ 264 (298)
.++|+||+.|.+|||++.
T Consensus 229 ~a~~iTG~~i~VDGG~~A 246 (247)
T 4hp8_A 229 AADYVHGAILNVDGGWLA 246 (247)
T ss_dssp GGTTCCSCEEEESTTGGG
T ss_pred hhcCCcCCeEEECccccc
Confidence 999999999999999764
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-56 Score=382.75 Aligned_cols=242 Identities=30% Similarity=0.460 Sum_probs=219.5
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
.|+||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++ +.++.+++||++|+++++++++++.++||
T Consensus 26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 102 (273)
T 4fgs_A 26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---GGGAVGIQADSANLAELDRLYEKVKAEAG 102 (273)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 599999999999999999999999999999999999998888777666 67789999999999999999999999999
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchh
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~ 168 (298)
+||+||||||+....++.+.+.++|++.|++|+.++++++|+++|+|++ +|+||+++|..+..+.+....
T Consensus 103 ~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~----------~G~IInisS~~~~~~~~~~~~ 172 (273)
T 4fgs_A 103 RIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR----------GSSVVLTGSTAGSTGTPAFSV 172 (273)
T ss_dssp CEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE----------EEEEEEECCGGGGSCCTTCHH
T ss_pred CCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh----------CCeEEEEeehhhccCCCCchH
Confidence 9999999999988899999999999999999999999999999999965 588999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCCh-----HHHHHHHhhhccCCCCCCHHHHHHHHHHh
Q 022386 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-----EEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (298)
Q Consensus 169 Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~dva~~~~~L 243 (298)
|++||+|+.+|+|+++.|++ ++|||||+|+||+++|++....... ++..+.+....|++|+++|+|+|++++||
T Consensus 173 Y~asKaav~~ltr~lA~Ela-~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~FL 251 (273)
T 4fgs_A 173 YAASKAALRSFARNWILDLK-DRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFL 251 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-TSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 99999999999999999998 8899999999999999876544321 34455677789999999999999999999
Q ss_pred cCCCCCCccccEEEeCCCCCC
Q 022386 244 ASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 244 ~s~~~~~~~G~~i~~dgG~~~ 264 (298)
+|+.++|+||+.|.+|||.+.
T Consensus 252 aSd~a~~iTG~~i~VDGG~s~ 272 (273)
T 4fgs_A 252 ASDDSSFVTGAELFVDGGSAQ 272 (273)
T ss_dssp HSGGGTTCCSCEEEESTTTTT
T ss_pred hCchhcCccCCeEeECcChhh
Confidence 999999999999999999764
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-55 Score=373.57 Aligned_cols=245 Identities=28% Similarity=0.314 Sum_probs=218.3
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
++|+||++|||||++|||+++|+.|+++|++|++++|+.+..+ ..+++.+.+.++.+++||++|+++++++++++.++|
T Consensus 3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~ 81 (258)
T 4gkb_A 3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATF 81 (258)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHh
Confidence 5799999999999999999999999999999999999977644 445666778889999999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
|++|+||||||+..... .+.+.++|++.+++|+.++++++|+++|+|+++ +|+||++||..+..+.+...
T Consensus 82 G~iDiLVNnAGi~~~~~-~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~---------~G~IVnisS~~~~~~~~~~~ 151 (258)
T 4gkb_A 82 GRLDGLVNNAGVNDGIG-LDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT---------RGAIVNISSKTAVTGQGNTS 151 (258)
T ss_dssp SCCCEEEECCCCCCCCC-TTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---------TCEEEEECCTHHHHCCSSCH
T ss_pred CCCCEEEECCCCCCCCC-ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc---------CCeEEEEeehhhccCCCCch
Confidence 99999999999865444 467999999999999999999999999999865 59999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC----hHHHHHHHhhhccC-CCCCCHHHHHHHHHH
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA----PEEIRSKATDYMAA-YKFGEKWDIAMAALY 242 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~dva~~~~~ 242 (298)
.|++||+|+.+|+|+++.|++ ++|||||+|+||+++|++...... +++..+......|+ +|+.+|+|+|++++|
T Consensus 152 ~Y~asKaav~~ltr~lA~ela-~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~v~f 230 (258)
T 4gkb_A 152 GYCASKGAQLALTREWAVALR-EHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVF 230 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHHHHHHHH
Confidence 999999999999999999998 889999999999999997654332 34445666777888 599999999999999
Q ss_pred hcCCCCCCccccEEEeCCCCCC
Q 022386 243 LASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 243 L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
|+|+.++|+||+.|.+|||++.
T Consensus 231 LaS~~a~~iTG~~i~VDGG~T~ 252 (258)
T 4gkb_A 231 LLSPRASHTTGEWLFVDGGYTH 252 (258)
T ss_dssp HHSGGGTTCCSCEEEESTTTTT
T ss_pred HhCchhcCccCCeEEECCCcch
Confidence 9999999999999999999874
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-55 Score=369.28 Aligned_cols=238 Identities=30% Similarity=0.415 Sum_probs=212.3
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
++.+.++||++|||||++|||+++|+.|+++|++|++++|+.+.+++ ..+.++..++||++|+++++++++
T Consensus 4 f~~dlf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~------~~~~~~~~~~~Dv~~~~~v~~~~~--- 74 (242)
T 4b79_A 4 FQHDIYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA------PRHPRIRREELDITDSQRLQRLFE--- 74 (242)
T ss_dssp BCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS------CCCTTEEEEECCTTCHHHHHHHHH---
T ss_pred CCCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh------hhcCCeEEEEecCCCHHHHHHHHH---
Confidence 34566899999999999999999999999999999999999765432 235678999999999999988775
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~ 164 (298)
+||++|+||||||+. .++.+.+.++|++++++|+.++++++|+++|+|+++ +|+|||+||..+..+.+
T Consensus 75 -~~g~iDiLVNNAGi~--~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~---------~G~IVnisS~~~~~~~~ 142 (242)
T 4b79_A 75 -ALPRLDVLVNNAGIS--RDREEYDLATFERVLRLNLSAAMLASQLARPLLAQR---------GGSILNIASMYSTFGSA 142 (242)
T ss_dssp -HCSCCSEEEECCCCC--CGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---------CEEEEEECCGGGTSCCS
T ss_pred -hcCCCCEEEECCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc---------CCeEEEEeeccccCCCC
Confidence 579999999999975 456788999999999999999999999999999865 59999999999999999
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhc
Q 022386 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (298)
Q Consensus 165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~ 244 (298)
....|++||+|+.+|+|+++.|++ ++|||||+|+||+++|++......+++..+.+....|++|+.+|+|+|++++||+
T Consensus 143 ~~~~Y~asKaav~~ltr~lA~Ela-~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLa 221 (242)
T 4b79_A 143 DRPAYSASKGAIVQLTRSLACEYA-AERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAAFLC 221 (242)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence 999999999999999999999998 8899999999999999987766666777788888999999999999999999999
Q ss_pred CCCCCCccccEEEeCCCCCC
Q 022386 245 SDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 245 s~~~~~~~G~~i~~dgG~~~ 264 (298)
|+.++|+||+.|.+|||+..
T Consensus 222 Sd~a~~iTG~~l~VDGG~la 241 (242)
T 4b79_A 222 GPGASFVTGAVLAVDGGYLC 241 (242)
T ss_dssp SGGGTTCCSCEEEESTTGGG
T ss_pred CchhcCccCceEEECccHhh
Confidence 99999999999999999753
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-53 Score=365.83 Aligned_cols=247 Identities=24% Similarity=0.254 Sum_probs=228.1
Q ss_pred CCCCCCcEEEEecCCc--hhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCC-CCeEEEEccCCCHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~--giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
|++|+||++|||||+| |||+++|+.|+++|++|++++|+.+.++++.+.+.+.+ .++.+++||++++++++++++++
T Consensus 1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 80 (256)
T 4fs3_A 1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQI 80 (256)
T ss_dssp CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHH
T ss_pred CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHH
Confidence 6789999999999865 99999999999999999999999999999988888764 57999999999999999999999
Q ss_pred HHHhCCccEEEECCCCCCC----CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 84 INHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
.++||++|++|||||+... .++.+.+.++|...+++|+.+++.+++.+.+++++ +|+||++||..+
T Consensus 81 ~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~----------~G~IVnisS~~~ 150 (256)
T 4fs3_A 81 GKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE----------GGSIVATTYLGG 150 (256)
T ss_dssp HHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTT----------CEEEEEEECGGG
T ss_pred HHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc----------CCEEEEEecccc
Confidence 9999999999999997532 45567889999999999999999999999887754 699999999999
Q ss_pred ccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHH
Q 022386 160 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239 (298)
Q Consensus 160 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (298)
..+.+....|++||+|+.+|+|+++.|++ ++|||||+|+||+++|++.......++..+.+....|++|+.+|+|+|++
T Consensus 151 ~~~~~~~~~Y~asKaal~~ltr~lA~Ela-~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~peevA~~ 229 (256)
T 4fs3_A 151 EFAVQNYNVMGVAKASLEANVKYLALDLG-PDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKRNVDQVEVGKT 229 (256)
T ss_dssp TSCCTTTHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHH
T ss_pred ccCcccchhhHHHHHHHHHHHHHHHHHhC-ccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 99999999999999999999999999998 88999999999999998877666667788888899999999999999999
Q ss_pred HHHhcCCCCCCccccEEEeCCCCCC
Q 022386 240 ALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 240 ~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
++||+|+.++|+||++|.+|||++.
T Consensus 230 v~fL~Sd~a~~iTG~~i~VDGG~~a 254 (256)
T 4fs3_A 230 AAYLLSDLSSGVTGENIHVDSGFHA 254 (256)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHHhCchhcCccCCEEEECcCHHh
Confidence 9999999999999999999999875
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-53 Score=357.25 Aligned_cols=231 Identities=25% Similarity=0.343 Sum_probs=210.0
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
+|++|||||++|||+++|+.|+++|++|++++|+.+.+++ +.+.+.++.+++||++|+++++++++++.++||++|
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~----~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iD 77 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSAD----FAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRID 77 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH----HHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 4999999999999999999999999999999999765544 444567799999999999999999999999999999
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHH
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~ 171 (298)
+||||||+....++.+.+.++|++++++|+.++++++|+++|+|.++ +|+||++||..+..+.+...+|++
T Consensus 78 iLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~---------~G~IInisS~~~~~~~~~~~~Y~a 148 (247)
T 3ged_A 78 VLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN---------KGRIINIASTRAFQSEPDSEAYAS 148 (247)
T ss_dssp EEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT---------TCEEEEECCGGGTSCCTTCHHHHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc---------CCcEEEEeecccccCCCCCHHHHH
Confidence 99999999888999999999999999999999999999999999875 489999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCCCCc
Q 022386 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYV 251 (298)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~ 251 (298)
||+|+.+|+|+++.|++ + |||||+|+||+++|++... ..+......|++|+.+|+|+|++++||+|+ +|+
T Consensus 149 sKaal~~ltk~lA~ela-~-~IrVN~I~PG~i~t~~~~~------~~~~~~~~~Pl~R~g~pediA~~v~fL~s~--~~i 218 (247)
T 3ged_A 149 AKGGIVALTHALAMSLG-P-DVLVNCIAPGWINVTEQQE------FTQEDCAAIPAGKVGTPKDISNMVLFLCQQ--DFI 218 (247)
T ss_dssp HHHHHHHHHHHHHHHHT-T-TSEEEEEEECSBCCCC---------CCHHHHHTSTTSSCBCHHHHHHHHHHHHHC--SSC
T ss_pred HHHHHHHHHHHHHHHHC-C-CCEEEEEecCcCCCCCcHH------HHHHHHhcCCCCCCcCHHHHHHHHHHHHhC--CCC
Confidence 99999999999999998 6 8999999999999886432 223445678999999999999999999984 699
Q ss_pred cccEEEeCCCCCCC
Q 022386 252 NGNTLIVDGGNWLS 265 (298)
Q Consensus 252 ~G~~i~~dgG~~~~ 265 (298)
||++|.+|||.+.+
T Consensus 219 TG~~i~VDGG~s~r 232 (247)
T 3ged_A 219 TGETIIVDGGMSKR 232 (247)
T ss_dssp CSCEEEESTTGGGC
T ss_pred CCCeEEECcCHHHh
Confidence 99999999998874
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-52 Score=359.08 Aligned_cols=240 Identities=20% Similarity=0.257 Sum_probs=210.9
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
|++++|+||++|||||++|||+++|+.|+++|++|++++|+.++ ...+..+++||++++++++++++++.
T Consensus 4 ~dl~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~----------~~~~~~~~~~Dv~~~~~v~~~~~~~~ 73 (261)
T 4h15_A 4 IEFLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPE----------GLPEELFVEADLTTKEGCAIVAEATR 73 (261)
T ss_dssp CCCCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCT----------TSCTTTEEECCTTSHHHHHHHHHHHH
T ss_pred hhccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchh----------CCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 44568999999999999999999999999999999999998542 12334578999999999999999999
Q ss_pred HHhCCccEEEECCCCCC--CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC
Q 022386 85 NHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~ 162 (298)
++||++|+||||||+.. ..++.+.+.++|++.+++|+.++++++|+++|+|++++ +|+||+++|..+..+
T Consensus 74 ~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~--------~G~Iv~isS~~~~~~ 145 (261)
T 4h15_A 74 QRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARG--------SGVVVHVTSIQRVLP 145 (261)
T ss_dssp HHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSC
T ss_pred HHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcC--------CceEEEEEehhhccC
Confidence 99999999999999753 35788999999999999999999999999999999887 799999999999988
Q ss_pred CC-CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc---------CC---hHHHHHHHhhhccCCC
Q 022386 163 TW-YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK---------LA---PEEIRSKATDYMAAYK 229 (298)
Q Consensus 163 ~~-~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~---------~~---~~~~~~~~~~~~~~~~ 229 (298)
.+ ....|++||+|+.+|+++++.|++ ++|||||+|+||+++|++.... .. .++.........|++|
T Consensus 146 ~~~~~~~Y~asKaal~~lt~~lA~Ela-~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR 224 (261)
T 4h15_A 146 LPESTTAYAAAKAALSTYSKAMSKEVS-PKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGR 224 (261)
T ss_dssp CTTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSS
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCC
Confidence 76 578999999999999999999998 8899999999999999854321 11 1233344456789999
Q ss_pred CCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCC
Q 022386 230 FGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW 263 (298)
Q Consensus 230 ~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~ 263 (298)
+.+|+|+|++++||+|+.++|+||+.|.+|||..
T Consensus 225 ~g~peevA~~v~fLaS~~a~~itG~~i~VDGG~v 258 (261)
T 4h15_A 225 PAKPEEVANLIAFLASDRAASITGAEYTIDGGTV 258 (261)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCS
T ss_pred CcCHHHHHHHHHHHhCchhcCccCcEEEECCcCc
Confidence 9999999999999999999999999999999953
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-50 Score=345.45 Aligned_cols=251 Identities=28% Similarity=0.398 Sum_probs=231.4
Q ss_pred CCCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCC-CCeEEEEccCCCHHHHHHHHHH
Q 022386 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVES 82 (298)
Q Consensus 4 ~~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dls~~~~~~~~~~~ 82 (298)
|.+|.+|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.+ .++.+++||++|++++++++++
T Consensus 2 p~~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 81 (262)
T 3pk0_A 2 PGSMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGR 81 (262)
T ss_dssp -CCTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHH
T ss_pred CCCccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHH
Confidence 456788999999999999999999999999999999999999999999999888776 6899999999999999999999
Q ss_pred HHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc-c
Q 022386 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-T 161 (298)
Q Consensus 83 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~-~ 161 (298)
+.++++++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|++++ .|+||++||..+. .
T Consensus 82 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~--------~g~iv~isS~~~~~~ 153 (262)
T 3pk0_A 82 AVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASG--------SGRVVLTSSITGPIT 153 (262)
T ss_dssp HHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHS--------SCEEEEECCSBTTTB
T ss_pred HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--------CcEEEEEechhhccC
Confidence 999999999999999998888889999999999999999999999999999999876 6899999999886 7
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHH
Q 022386 162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241 (298)
Q Consensus 162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~ 241 (298)
+.+....|++||++++.|+++++.|++ ++||+||+|+||+++|++.... .++.........|.+++.+|+|+|++++
T Consensus 154 ~~~~~~~Y~asK~a~~~l~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~r~~~p~dva~~v~ 230 (262)
T 3pk0_A 154 GYPGWSHYGATKAAQLGFMRTAAIELA-PHKITVNAIMPGNIMTEGLLEN--GEEYIASMARSIPAGALGTPEDIGHLAA 230 (262)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCCHHHHTT--CHHHHHHHHTTSTTSSCBCHHHHHHHHH
T ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHH-hhCcEEEEEEeCcCcCcccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 888899999999999999999999998 8899999999999998865432 3456667778889999999999999999
Q ss_pred HhcCCCCCCccccEEEeCCCCCCC
Q 022386 242 YLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 242 ~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
||+++.++++||+.|.+|||..+.
T Consensus 231 ~L~s~~~~~itG~~i~vdGG~~~~ 254 (262)
T 3pk0_A 231 FLATKEAGYITGQAIAVDGGQVLP 254 (262)
T ss_dssp HHHSGGGTTCCSCEEEESTTTTCC
T ss_pred HHhCccccCCcCCEEEECCCeecC
Confidence 999999999999999999998875
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-50 Score=343.90 Aligned_cols=250 Identities=27% Similarity=0.382 Sum_probs=231.4
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEE-cCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
+++|++|||||++|||++++++|+++|++|+++ +|+.+.+++..+++.+.+.++.++.||++|+++++++++++.+.++
T Consensus 2 ~~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (258)
T 3oid_A 2 EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFG 81 (258)
T ss_dssp -CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 468999999999999999999999999999986 8998888999999988888999999999999999999999999999
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchh
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~ 168 (298)
++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|++++ .|+||++||..+..+.+....
T Consensus 82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~--------~g~iv~isS~~~~~~~~~~~~ 153 (258)
T 3oid_A 82 RLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNG--------GGHIVSISSLGSIRYLENYTT 153 (258)
T ss_dssp CCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT--------CEEEEEEEEGGGTSBCTTCHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--------CcEEEEECchhhCCCCCCcHH
Confidence 999999999988778888899999999999999999999999999999865 689999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCC
Q 022386 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (298)
Q Consensus 169 Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~ 248 (298)
|++||++++.|+++++.|++ ++||+||+|+||+++|++.......++.........|.+++.+|+|+|++++||+++.+
T Consensus 154 Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~ 232 (258)
T 3oid_A 154 VGVSKAALEALTRYLAVELS-PKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKA 232 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTTSSCBCHHHHHHHHHHHTSSTT
T ss_pred HHHHHHHHHHHHHHHHHHHh-hcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence 99999999999999999998 78999999999999998776655556667777788899999999999999999999999
Q ss_pred CCccccEEEeCCCCCCCCCC
Q 022386 249 KYVNGNTLIVDGGNWLSNPR 268 (298)
Q Consensus 249 ~~~~G~~i~~dgG~~~~~~~ 268 (298)
+++||+.|.+|||.++..+.
T Consensus 233 ~~itG~~i~vdGG~~~~~~~ 252 (258)
T 3oid_A 233 DMIRGQTIIVDGGRSLLVLE 252 (258)
T ss_dssp TTCCSCEEEESTTGGGBCC-
T ss_pred CCccCCEEEECCCccCCCCC
Confidence 99999999999999886543
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-50 Score=343.72 Aligned_cols=249 Identities=33% Similarity=0.471 Sum_probs=230.3
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
++.+|+||++|||||++|||++++++|+++|++|++++|+.+.++++.+++.+.+.++.+++||++|+++++++++++.+
T Consensus 6 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 85 (256)
T 3gaf_A 6 SPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALD 85 (256)
T ss_dssp CTTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 45679999999999999999999999999999999999999999999999988888999999999999999999999999
Q ss_pred HhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC
Q 022386 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~ 165 (298)
.++++|++|||||+....++ +.+.++|++.+++|+.++++++++++|+|++++ .|+||++||..+..+.+.
T Consensus 86 ~~g~id~lv~nAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~ 156 (256)
T 3gaf_A 86 QFGKITVLVNNAGGGGPKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAG--------GGAILNISSMAGENTNVR 156 (256)
T ss_dssp HHSCCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--------CEEEEEECCGGGTCCCTT
T ss_pred HcCCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--------CcEEEEEcCHHHcCCCCC
Confidence 99999999999998877777 889999999999999999999999999999876 689999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcC
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s 245 (298)
...|++||++++.|+++++.|++ ++|||||+|+||+++|++..... .++.........|.+++.+|+|+|++++||++
T Consensus 157 ~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~p~~r~~~~~dva~~~~~L~s 234 (256)
T 3gaf_A 157 MASYGSSKAAVNHLTRNIAFDVG-PMGIRVNAIAPGAIKTDALATVL-TPEIERAMLKHTPLGRLGEAQDIANAALFLCS 234 (256)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCCHHHHHHC-CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHS
T ss_pred chHHHHHHHHHHHHHHHHHHHHh-hhCcEEEEEEEccccCchhhhcc-CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC
Confidence 99999999999999999999998 78999999999999988654433 34555667778899999999999999999999
Q ss_pred CCCCCccccEEEeCCCCCCC
Q 022386 246 DAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 246 ~~~~~~~G~~i~~dgG~~~~ 265 (298)
+.+.++||+.|.+|||...+
T Consensus 235 ~~~~~itG~~i~vdgG~~~~ 254 (256)
T 3gaf_A 235 PAAAWISGQVLTVSGGGVQE 254 (256)
T ss_dssp GGGTTCCSCEEEESTTSCCC
T ss_pred CcccCccCCEEEECCCcccc
Confidence 99999999999999998764
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-50 Score=346.46 Aligned_cols=251 Identities=25% Similarity=0.290 Sum_probs=224.6
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHh-CCC-CeEEEEccCCCHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGI-PAIGLEGDVRKREDAVRVVES 82 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~-~~~-~~~~~~~Dls~~~~~~~~~~~ 82 (298)
|++.+|++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+ .+. ++.++.||++|++++++++++
T Consensus 1 M~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 80 (265)
T 3lf2_A 1 MKPYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEA 80 (265)
T ss_dssp --CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCccCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHH
Confidence 566789999999999999999999999999999999999999999998888876 444 489999999999999999999
Q ss_pred HHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC
Q 022386 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (298)
Q Consensus 83 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~ 162 (298)
+.+.++++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|++++ .|+||++||..+..+
T Consensus 81 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~ 152 (265)
T 3lf2_A 81 CERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRA--------DAAIVCVNSLLASQP 152 (265)
T ss_dssp HHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTST--------TEEEEEEEEGGGTSC
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccC--------CeEEEEECCcccCCC
Confidence 999999999999999998888899999999999999999999999999999998765 699999999999999
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC--------ChHHHHHHHhhh--ccCCCCCC
Q 022386 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL--------APEEIRSKATDY--MAAYKFGE 232 (298)
Q Consensus 163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~--------~~~~~~~~~~~~--~~~~~~~~ 232 (298)
.+....|++||+|++.|+++++.|++ ++|||||+|+||+++|++..... ..+......... .|.+++.+
T Consensus 153 ~~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~ 231 (265)
T 3lf2_A 153 EPHMVATSAARAGVKNLVRSMAFEFA-PKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGK 231 (265)
T ss_dssp CTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBC
T ss_pred CCCchhhHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcC
Confidence 99999999999999999999999998 88999999999999987643321 112222222222 79999999
Q ss_pred HHHHHHHHHHhcCCCCCCccccEEEeCCCCCC
Q 022386 233 KWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 233 ~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
|+|+|++++||+++.++++||+.|.+|||.+.
T Consensus 232 pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~ 263 (265)
T 3lf2_A 232 PIEAARAILFLASPLSAYTTGSHIDVSGGLSR 263 (265)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSEEEEESSSCCC
T ss_pred HHHHHHHHHHHhCchhcCcCCCEEEECCCCcC
Confidence 99999999999999999999999999999875
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-50 Score=347.87 Aligned_cols=255 Identities=29% Similarity=0.401 Sum_probs=229.9
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
|+|.+|+||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.+.+.++.++.||++|+++++++++++.
T Consensus 1 M~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 80 (280)
T 3tox_A 1 MVMSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAV 80 (280)
T ss_dssp ---CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred CCccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 56778999999999999999999999999999999999999999999999998878889999999999999999999999
Q ss_pred HHhCCccEEEECCCCC-CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc-cC
Q 022386 85 NHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TA 162 (298)
Q Consensus 85 ~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~-~~ 162 (298)
+.++++|++|||||+. ...++.+.+.++|++.+++|+.++++++++++|+|.+++ .|+||++||..+. .+
T Consensus 81 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~ 152 (280)
T 3tox_A 81 RRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALG--------GGSLTFTSSFVGHTAG 152 (280)
T ss_dssp HHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--------CEEEEEECCSBTTTBC
T ss_pred HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--------CCEEEEEcChhhCcCC
Confidence 9999999999999976 457788899999999999999999999999999999876 6899999999987 67
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC--ChHHHHHHHhhhccCCCCCCHHHHHHHH
Q 022386 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL--APEEIRSKATDYMAAYKFGEKWDIAMAA 240 (298)
Q Consensus 163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~ 240 (298)
.+....|++||+|++.|+++++.|++ ++||+||+|+||+++|++..... ..++....+....+.+++.+|+|+|+++
T Consensus 153 ~~~~~~Y~asKaa~~~l~~~la~e~~-~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v 231 (280)
T 3tox_A 153 FAGVAPYAASKAGLIGLVQALAVELG-ARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAA 231 (280)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHH-TTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccCCCcCHHHHHHHH
Confidence 88899999999999999999999998 88999999999999998765422 2345556667778899999999999999
Q ss_pred HHhcCCCCCCccccEEEeCCCCCCCCCC
Q 022386 241 LYLASDAGKYVNGNTLIVDGGNWLSNPR 268 (298)
Q Consensus 241 ~~L~s~~~~~~~G~~i~~dgG~~~~~~~ 268 (298)
+||+++.++++||++|.+|||.++..+.
T Consensus 232 ~~L~s~~a~~itG~~i~vdGG~~~~~~a 259 (280)
T 3tox_A 232 LYLASDGASFVTGAALLADGGASVTKAA 259 (280)
T ss_dssp HHHHSGGGTTCCSCEEEESTTGGGCC--
T ss_pred HHHhCccccCCcCcEEEECCCccccccc
Confidence 9999999999999999999999986544
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-50 Score=347.04 Aligned_cols=252 Identities=26% Similarity=0.358 Sum_probs=231.6
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHh-CCCCeEEEEccCCCHHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
..+.+|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+ .+.++.+++||++|+++++++++++
T Consensus 13 ~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 92 (266)
T 4egf_A 13 AGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRA 92 (266)
T ss_dssp CGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHH
T ss_pred ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence 345679999999999999999999999999999999999999999888888876 5778999999999999999999999
Q ss_pred HHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
.+.++++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|.+++. +|+||++||..+..+.
T Consensus 93 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~ 165 (266)
T 4egf_A 93 AEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGE-------GGAIITVASAAALAPL 165 (266)
T ss_dssp HHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-------CEEEEEECCGGGTSCC
T ss_pred HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-------CeEEEEEcchhhccCC
Confidence 999999999999999988888888999999999999999999999999999987642 5899999999999999
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHh
Q 022386 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (298)
Q Consensus 164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L 243 (298)
+....|++||+|++.|+++++.|++ ++|||||+|+||+++|++.......++.........|.+++.+|+|+|++++||
T Consensus 166 ~~~~~Y~asK~a~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L 244 (266)
T 4egf_A 166 PDHYAYCTSKAGLVMATKVLARELG-PHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWL 244 (266)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTTSSCBCHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHh-hhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 9999999999999999999999998 789999999999999987655444555666677788999999999999999999
Q ss_pred cCCCCCCccccEEEeCCCCCC
Q 022386 244 ASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 244 ~s~~~~~~~G~~i~~dgG~~~ 264 (298)
+++.++++||+.|.+|||.++
T Consensus 245 ~s~~~~~itG~~i~vdGG~~~ 265 (266)
T 4egf_A 245 ASDAASMINGVDIPVDGGYTM 265 (266)
T ss_dssp HSGGGTTCCSCEEEESTTGGG
T ss_pred hCchhcCccCcEEEECCCccC
Confidence 999999999999999999865
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-50 Score=348.26 Aligned_cols=250 Identities=27% Similarity=0.384 Sum_probs=231.9
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
+.+|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.+.++.++.||++|+++++++++++.+.
T Consensus 21 ~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 100 (271)
T 4ibo_A 21 IFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQ 100 (271)
T ss_dssp GGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 35799999999999999999999999999999999999999999999999888889999999999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
++++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|.+++ .|+||++||..+..+.+..
T Consensus 101 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--------~g~iV~isS~~~~~~~~~~ 172 (271)
T 4ibo_A 101 GIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRG--------YGKIVNIGSLTSELARATV 172 (271)
T ss_dssp TCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSBCTTC
T ss_pred CCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--------CcEEEEEccHHhCCCCCCc
Confidence 99999999999998888888999999999999999999999999999999876 6899999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
..|++||+|++.|+++++.|++ ++||+||+|+||+++|++.......++..+......|.+++.+|+|+|++++||+++
T Consensus 173 ~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~ 251 (271)
T 4ibo_A 173 APYTVAKGGIKMLTRAMAAEWA-QYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFLSAS 251 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSG
T ss_pred hhHHHHHHHHHHHHHHHHHHHh-hhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 9999999999999999999998 889999999999999987544333355666777888999999999999999999999
Q ss_pred CCCCccccEEEeCCCCCCC
Q 022386 247 AGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 247 ~~~~~~G~~i~~dgG~~~~ 265 (298)
.++++||+.|.+|||..+.
T Consensus 252 ~~~~itG~~i~vdGG~~~~ 270 (271)
T 4ibo_A 252 ASDYVNGQIIYVDGGMLSV 270 (271)
T ss_dssp GGTTCCSCEEEESTTGGGB
T ss_pred cccCCCCcEEEECCCeecc
Confidence 9999999999999997653
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-49 Score=344.05 Aligned_cols=258 Identities=28% Similarity=0.424 Sum_probs=233.4
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCC---CeEEEEccCCCHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGI---PAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
.+|++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.+. ++.+++||++|+++++++++++.
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 86 (281)
T 3svt_A 7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVT 86 (281)
T ss_dssp -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred cCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999887655 78999999999999999999999
Q ss_pred HHhCCccEEEECCCC-CCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 85 NHFGKLDILVNAAAG-NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 85 ~~~~~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
+.++++|++|||||+ ....++.+.+.++|++.+++|+.++++++++++|+|.+++ +|+||++||..+..+.
T Consensus 87 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~ 158 (281)
T 3svt_A 87 AWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGG--------GGSFVGISSIAASNTH 158 (281)
T ss_dssp HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--------CEEEEEECCHHHHSCC
T ss_pred HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--------CcEEEEEeCHHHcCCC
Confidence 999999999999997 5557788899999999999999999999999999999866 6899999999999999
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHh
Q 022386 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (298)
Q Consensus 164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L 243 (298)
+....|++||++++.|+++++.|++ ++||+||+|+||+++|++.......++.........|.+++.+|+|+|++++||
T Consensus 159 ~~~~~Y~asK~a~~~l~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l 237 (281)
T 3svt_A 159 RWFGAYGVTKSAVDHLMQLAADELG-ASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFL 237 (281)
T ss_dssp TTCTHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSSSCBCHHHHHHHHHHH
T ss_pred CCChhHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 9999999999999999999999998 789999999999999987654434455666777888999999999999999999
Q ss_pred cCCCCCCccccEEEeCCCCCCCCCCCCchhH
Q 022386 244 ASDAGKYVNGNTLIVDGGNWLSNPRDLPKEA 274 (298)
Q Consensus 244 ~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~ 274 (298)
+++.++++||+.|.+|||.++.....+.+.+
T Consensus 238 ~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~ 268 (281)
T 3svt_A 238 LSDAASFVTGQVINVDGGQMLRRGPDFSAML 268 (281)
T ss_dssp HSGGGTTCCSCEEEESTTGGGSCCCCCHHHH
T ss_pred hCcccCCCCCCEEEeCCChhcccCCcchhcc
Confidence 9999999999999999999987444444443
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-49 Score=345.55 Aligned_cols=250 Identities=32% Similarity=0.428 Sum_probs=220.1
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
+|+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.+.++.+++||++|+++++++++++.+
T Consensus 22 ~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 101 (283)
T 3v8b_A 22 SMMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVL 101 (283)
T ss_dssp -----CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred hhcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999988888999999999999999999999999
Q ss_pred HhCCccEEEECCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc--C
Q 022386 86 HFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT--A 162 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~--~ 162 (298)
.+|++|++|||||+... .++.+.+.++|++.+++|+.++++++++++|+|++++ .|+||++||..+.. +
T Consensus 102 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~--------~g~Iv~isS~~~~~~~~ 173 (283)
T 3v8b_A 102 KFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRG--------GGAIVVVSSINGTRTFT 173 (283)
T ss_dssp HHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCSBTTTBCC
T ss_pred HhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--------CceEEEEcChhhccCCC
Confidence 99999999999998644 7888999999999999999999999999999999876 69999999999877 7
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHH-----HHHHhhhccC--CCCCCHHH
Q 022386 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI-----RSKATDYMAA--YKFGEKWD 235 (298)
Q Consensus 163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~~d 235 (298)
.++...|++||+|++.|+++++.|++ ++||+||+|+||+++|++........+. .+......|. +++.+|+|
T Consensus 174 ~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~ped 252 (283)
T 3v8b_A 174 TPGATAYTATKAAQVAIVQQLALELG-KHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSED 252 (283)
T ss_dssp STTCHHHHHHHHHHHHHHHHHHHHTT-TTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhC-ccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHH
Confidence 77889999999999999999999998 8899999999999999876543222111 1122334455 88999999
Q ss_pred HHHHHHHhcCCCCCCccccEEEeCCCCCC
Q 022386 236 IAMAALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 236 va~~~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
+|++++||+++.++++||+.|.+|||.++
T Consensus 253 vA~~v~fL~s~~a~~itG~~i~vdGG~~~ 281 (283)
T 3v8b_A 253 VAELIRFLVSERARHVTGSPVWIDGGQGL 281 (283)
T ss_dssp HHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred HHHHHHHHcCccccCCcCCEEEECcCccc
Confidence 99999999999999999999999999754
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-49 Score=335.85 Aligned_cols=244 Identities=28% Similarity=0.363 Sum_probs=223.3
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
+++|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.. +..+++||++|+++++++++++.++
T Consensus 4 ~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~ 80 (248)
T 3op4_A 4 FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD---NGKGMALNVTNPESIEAVLKAITDE 80 (248)
T ss_dssp TTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG---GEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc---cceEEEEeCCCHHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999999999888887777643 4778999999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
++++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|.+++ .|+||++||..+..+.++.
T Consensus 81 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~--------~g~iv~isS~~~~~~~~~~ 152 (248)
T 3op4_A 81 FGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKR--------QGRIINVGSVVGTMGNAGQ 152 (248)
T ss_dssp HCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCHHHHHCCTTC
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--------CCEEEEEcchhhcCCCCCC
Confidence 99999999999998878888899999999999999999999999999998876 6999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
..|++||+|++.|+++++.|++ ++|||||+|+||+++|++.... .++.........|.+++.+|+|+|+++.||+++
T Consensus 153 ~~Y~asK~a~~~l~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~ 229 (248)
T 3op4_A 153 ANYAAAKAGVIGFTKSMAREVA-SRGVTVNTVAPGFIETDMTKAL--NDEQRTATLAQVPAGRLGDPREIASAVAFLASP 229 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBSSTTTTTS--CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSG
T ss_pred hHHHHHHHHHHHHHHHHHHHHH-HhCeEEEEEeeCCCCCchhhhc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCC
Confidence 9999999999999999999998 7899999999999999865432 344555666778999999999999999999999
Q ss_pred CCCCccccEEEeCCCCCC
Q 022386 247 AGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 247 ~~~~~~G~~i~~dgG~~~ 264 (298)
.+.++||+.|.+|||.++
T Consensus 230 ~~~~itG~~i~vdgG~~~ 247 (248)
T 3op4_A 230 EAAYITGETLHVNGGMYM 247 (248)
T ss_dssp GGTTCCSCEEEESTTSSC
T ss_pred ccCCccCcEEEECCCeec
Confidence 999999999999999764
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-49 Score=339.15 Aligned_cols=247 Identities=22% Similarity=0.353 Sum_probs=227.6
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
..|+||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.+.+.++.+++||++|+++++++++++.+.|
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (264)
T 3ucx_A 7 GLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAY 86 (264)
T ss_dssp CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999999999999999999999999999998888899999999999999999999999999
Q ss_pred CCccEEEECCCCC-CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 88 GKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 88 ~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
+++|++|||||.. ...++.+.+.++|++.+++|+.++++++++++|.|.++ +|+||++||..+..+.+..
T Consensus 87 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~ 157 (264)
T 3ucx_A 87 GRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEES---------KGAVVNVNSMVVRHSQAKY 157 (264)
T ss_dssp SCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH---------TCEEEEECCGGGGCCCTTC
T ss_pred CCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---------CCEEEEECcchhccCCCcc
Confidence 9999999999975 56788889999999999999999999999999999875 4899999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC---------ChHHHHHHHhhhccCCCCCCHHHHH
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---------APEEIRSKATDYMAAYKFGEKWDIA 237 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva 237 (298)
..|++||++++.|+++++.|++ ++||+||+|+||+++|++..... ..++.........|.+++.+|+|+|
T Consensus 158 ~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA 236 (264)
T 3ucx_A 158 GAYKMAKSALLAMSQTLATELG-EKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVA 236 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-ccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHH
Confidence 9999999999999999999998 88999999999999987643321 2345566677788999999999999
Q ss_pred HHHHHhcCCCCCCccccEEEeCCCCCC
Q 022386 238 MAALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 238 ~~~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
++++||+++.++++||+.|.+|||.++
T Consensus 237 ~~v~~L~s~~~~~itG~~i~vdGG~~~ 263 (264)
T 3ucx_A 237 SAILFMASDLASGITGQALDVNCGEYK 263 (264)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred HHHHHHcCccccCCCCCEEEECCCccC
Confidence 999999999999999999999999875
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-49 Score=343.58 Aligned_cols=251 Identities=28% Similarity=0.360 Sum_probs=230.5
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCC-CCeEEEEccCCCHHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
..+.+|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.+ .++.+++||++|+++++++++++
T Consensus 34 ~~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 113 (293)
T 3rih_A 34 KVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTV 113 (293)
T ss_dssp CCTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHH
Confidence 34668999999999999999999999999999999999999999999999988776 68999999999999999999999
Q ss_pred HHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc-cC
Q 022386 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TA 162 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~-~~ 162 (298)
.+.++++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+. .+
T Consensus 114 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~--------~g~iV~isS~~~~~~~ 185 (293)
T 3rih_A 114 VDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASG--------RGRVILTSSITGPVTG 185 (293)
T ss_dssp HHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHS--------SCEEEEECCSBTTTBB
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--------CCEEEEEeChhhccCC
Confidence 99999999999999998888889999999999999999999999999999998876 6899999999886 78
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHH
Q 022386 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (298)
Q Consensus 163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 242 (298)
.+....|++||++++.|+++++.|++ ++||+||+|+||+++|++.... .++.........|.+++.+|+|+|++++|
T Consensus 186 ~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~r~~~p~dvA~~v~f 262 (293)
T 3rih_A 186 YPGWSHYGASKAAQLGFMRTAAIELA-PRGVTVNAILPGNILTEGLVDM--GEEYISGMARSIPMGMLGSPVDIGHLAAF 262 (293)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCCHHHHHT--CHHHHHHHHTTSTTSSCBCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHh-hhCeEEEEEecCCCcCcchhhc--cHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 88899999999999999999999998 7899999999999998764332 24556667778899999999999999999
Q ss_pred hcCCCCCCccccEEEeCCCCCCCC
Q 022386 243 LASDAGKYVNGNTLIVDGGNWLSN 266 (298)
Q Consensus 243 L~s~~~~~~~G~~i~~dgG~~~~~ 266 (298)
|+++.++++||++|.+|||..+..
T Consensus 263 L~s~~a~~itG~~i~vdGG~~~~~ 286 (293)
T 3rih_A 263 LATDEAGYITGQAIVVDGGQVLPE 286 (293)
T ss_dssp HHSGGGTTCCSCEEEESTTTTCBS
T ss_pred HhCccccCCCCCEEEECCCccCCC
Confidence 999999999999999999998853
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-49 Score=340.97 Aligned_cols=246 Identities=31% Similarity=0.428 Sum_probs=228.0
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
.+|++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.+.+.++.++.||++|+++++++++++.+.+
T Consensus 24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (270)
T 3ftp_A 24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEF 103 (270)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999999999999999999999999988888888889999999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
+++|++|||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+..+.+...
T Consensus 104 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~ 175 (270)
T 3ftp_A 104 GALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKAR--------GGRIVNITSVVGSAGNPGQV 175 (270)
T ss_dssp SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCHHHHHCCTTBH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--------CCEEEEECchhhCCCCCCch
Confidence 9999999999988888888999999999999999999999999999998876 69999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~ 247 (298)
.|++||+|++.|+++++.|++ ++||+||+|+||+++|++.... .++.........+.+++.+|+|+|++++||+++.
T Consensus 176 ~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~ 252 (270)
T 3ftp_A 176 NYAAAKAGVAGMTRALAREIG-SRGITVNCVAPGFIDTDMTKGL--PQEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQ 252 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSHHHHHS--CHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred hHHHHHHHHHHHHHHHHHHHh-hhCeEEEEEEeCCCcCcchhhc--CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCCC
Confidence 999999999999999999998 7899999999999998864332 3445566677789999999999999999999999
Q ss_pred CCCccccEEEeCCCCCC
Q 022386 248 GKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 248 ~~~~~G~~i~~dgG~~~ 264 (298)
+.++||+.|.+|||..+
T Consensus 253 ~~~itG~~i~vdGG~~~ 269 (270)
T 3ftp_A 253 AGYITGTTLHVNGGMFM 269 (270)
T ss_dssp GTTCCSCEEEESTTSSC
T ss_pred cCCccCcEEEECCCccc
Confidence 99999999999999765
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-49 Score=339.70 Aligned_cols=248 Identities=27% Similarity=0.345 Sum_probs=213.5
Q ss_pred CCCCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHH
Q 022386 3 SPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES 82 (298)
Q Consensus 3 ~~~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~ 82 (298)
.|.+|.+|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++ +.++.++.+|++|++++++++++
T Consensus 18 g~~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~ 94 (266)
T 3grp_A 18 GPGSMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL---GKDVFVFSANLSDRKSIKQLAEV 94 (266)
T ss_dssp ---CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CSSEEEEECCTTSHHHHHHHHHH
T ss_pred CCcchhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEeecCCHHHHHHHHHH
Confidence 356778899999999999999999999999999999999999988777765544 66799999999999999999999
Q ss_pred HHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC
Q 022386 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (298)
Q Consensus 83 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~ 162 (298)
+.+.++++|++|||||+....++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+..+
T Consensus 95 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--------~g~Iv~isS~~~~~~ 166 (266)
T 3grp_A 95 AEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRR--------YGRIINITSIVGVVG 166 (266)
T ss_dssp HHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCC-----
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--------CcEEEEECCHHHcCC
Confidence 999999999999999988778888889999999999999999999999999998876 689999999999999
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHH
Q 022386 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (298)
Q Consensus 163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 242 (298)
.+....|++||+|++.|+++++.|++ ++||+||+|+||+++|++.... .++..+.+....|.+++.+|+|+|++++|
T Consensus 167 ~~~~~~Y~asKaa~~~~~~~la~e~~-~~gI~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~r~~~~edvA~~v~~ 243 (266)
T 3grp_A 167 NPGQTNYCAAKAGLIGFSKALAQEIA-SRNITVNCIAPGFIKSAMTDKL--NEKQKEAIMAMIPMKRMGIGEEIAFATVY 243 (266)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSHHHHTC--CHHHHHHHHTTCTTCSCBCHHHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHhh-hhCcEEEEEeeCcCCCchhhcc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 99999999999999999999999998 7899999999999998865432 34556667778899999999999999999
Q ss_pred hcCCCCCCccccEEEeCCCCCC
Q 022386 243 LASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 243 L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
|+++.++++||+.|.+|||.++
T Consensus 244 L~s~~~~~itG~~i~vdGG~~~ 265 (266)
T 3grp_A 244 LASDEAAYLTGQTLHINGGMAM 265 (266)
T ss_dssp HHSGGGTTCCSCEEEESTTC--
T ss_pred HhCccccCccCCEEEECCCeee
Confidence 9999999999999999999764
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-49 Score=344.41 Aligned_cols=253 Identities=43% Similarity=0.695 Sum_probs=229.7
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHh-CCCCeEEEEccCCCHHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
+.+.+|+||++|||||++|||++++++|+++|++|++++|+.+.+++..+++.. .+.++.+++||++|+++++++++++
T Consensus 20 ~~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 99 (277)
T 4fc7_A 20 FCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQA 99 (277)
T ss_dssp BCTTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 566789999999999999999999999999999999999999888888877754 4678999999999999999999999
Q ss_pred HHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
.+.++++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+..+.
T Consensus 100 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~ 171 (277)
T 4fc7_A 100 LKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDH--------GGVIVNITATLGNRGQ 171 (277)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH--------CEEEEEECCSHHHHTC
T ss_pred HHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--------CCEEEEECchhhCCCC
Confidence 99999999999999988778888899999999999999999999999999998765 6899999999999999
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC-ChHHHHHHHhhhccCCCCCCHHHHHHHHHH
Q 022386 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (298)
Q Consensus 164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 242 (298)
+....|++||+|++.|+++++.|++ ++|||||+|+||+++|++..... ..++.........|.+++.+|+|+|++++|
T Consensus 172 ~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~f 250 (277)
T 4fc7_A 172 ALQVHAGSAKAAVDAMTRHLAVEWG-PQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLY 250 (277)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTSSCBCHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCCCCcCHHHHHHHHHH
Confidence 9999999999999999999999998 78999999999999987543222 234555666778899999999999999999
Q ss_pred hcCCCCCCccccEEEeCCCCCCCC
Q 022386 243 LASDAGKYVNGNTLIVDGGNWLSN 266 (298)
Q Consensus 243 L~s~~~~~~~G~~i~~dgG~~~~~ 266 (298)
|+++.++++||++|.+|||.++..
T Consensus 251 L~s~~~~~itG~~i~vdGG~~~~~ 274 (277)
T 4fc7_A 251 LASPLASYVTGAVLVADGGAWLTF 274 (277)
T ss_dssp HHSGGGTTCCSCEEEESTTHHHHC
T ss_pred HcCCccCCcCCCEEEECCCcccCC
Confidence 999999999999999999987754
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-48 Score=338.65 Aligned_cols=252 Identities=25% Similarity=0.339 Sum_probs=220.9
Q ss_pred CCCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCC------------hhHHHHHHHHHHhCCCCeEEEEccCC
Q 022386 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR------------KTVLRSAVAALHSLGIPAIGLEGDVR 71 (298)
Q Consensus 4 ~~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~Dls 71 (298)
|++|.+|+||++|||||++|||+++|++|+++|++|++++|+ .+.+++..+.+...+.++.++++|++
T Consensus 2 p~~m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~ 81 (281)
T 3s55_A 2 PGSMADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVK 81 (281)
T ss_dssp ----CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CCcccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCC
Confidence 567889999999999999999999999999999999999997 56677777788888889999999999
Q ss_pred CHHHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEE
Q 022386 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGII 151 (298)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~i 151 (298)
|+++++++++++.+.++++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|.+++ .|+|
T Consensus 82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--------~g~i 153 (281)
T 3s55_A 82 DRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRN--------YGRI 153 (281)
T ss_dssp CHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEE
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--------CCEE
Confidence 99999999999999999999999999998888888999999999999999999999999999998876 6999
Q ss_pred EEecccccccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc-----C-------ChHHHHH
Q 022386 152 INISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK-----L-------APEEIRS 219 (298)
Q Consensus 152 v~vss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~-----~-------~~~~~~~ 219 (298)
|++||..+..+.+....|++||+|++.|+++++.|++ ++||+||+|+||+++|++.... . ...+...
T Consensus 154 v~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (281)
T 3s55_A 154 VTVSSMLGHSANFAQASYVSSKWGVIGLTKCAAHDLV-GYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVES 232 (281)
T ss_dssp EEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHH
T ss_pred EEECChhhcCCCCCCchhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEecCcccCccccchhhhccccccccccchhHHHH
Confidence 9999999999999999999999999999999999998 7899999999999999875431 0 0111111
Q ss_pred H--HhhhccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 220 K--ATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 220 ~--~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
. .....+ +++.+|+|+|++++||+++.+.++||+.|.+|||.+++
T Consensus 233 ~~~~~~~~~-~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~ 279 (281)
T 3s55_A 233 VFASLHLQY-APFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR 279 (281)
T ss_dssp HHHHHCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred HHHhhhccC-cCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence 1 112223 78999999999999999999999999999999998764
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-49 Score=338.77 Aligned_cols=251 Identities=41% Similarity=0.648 Sum_probs=224.6
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
.+|+||++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+.++.+++||++|+++++++++++.+.+
T Consensus 2 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 81 (257)
T 3imf_A 2 NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF 81 (257)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 46889999999999999999999999999999999999999999999998888889999999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
+++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|.++.. .|+||++||..+..+.+...
T Consensus 82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~ 154 (257)
T 3imf_A 82 GRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGI-------KGNIINMVATYAWDAGPGVI 154 (257)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-------CCEEEEECCGGGGSCCTTCH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCC-------CcEEEEECchhhccCCCCcH
Confidence 99999999999887788889999999999999999999999999999954421 58999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC-ChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
.|++||+|++.|+++++.|++.++|||||+|+||+++|++..... ..++..+......|.+++.+|+|+|++++||+++
T Consensus 155 ~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~ 234 (257)
T 3imf_A 155 HSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLCSD 234 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence 999999999999999999985245999999999999988654322 2233344556678899999999999999999999
Q ss_pred CCCCccccEEEeCCCCCCC
Q 022386 247 AGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 247 ~~~~~~G~~i~~dgG~~~~ 265 (298)
.+.++||+.|.+|||.++.
T Consensus 235 ~~~~itG~~i~vdGG~~~~ 253 (257)
T 3imf_A 235 EAAYINGTCMTMDGGQHLH 253 (257)
T ss_dssp GGTTCCSCEEEESTTTTSC
T ss_pred hhcCccCCEEEECCCcccC
Confidence 9999999999999998874
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-49 Score=341.96 Aligned_cols=251 Identities=25% Similarity=0.348 Sum_probs=224.8
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
....++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.+.++.++.||++|+++++++++++.
T Consensus 17 ~~~~m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 96 (279)
T 3sju_A 17 RGSHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAV 96 (279)
T ss_dssp --------CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CcccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 44557889999999999999999999999999999999999999999999998888899999999999999999999999
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHH--HHHhcCCCCCCCCCCcEEEEecccccccC
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALK--YLKKGGRGQASSSSGGIIINISATLHYTA 162 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~~~~~~~~~~g~iv~vss~~~~~~ 162 (298)
+.++++|+||||||+....++.+.+.++|++.+++|+.++++++++++| .|.+++ .|+||++||..+..+
T Consensus 97 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~--------~g~iV~isS~~~~~~ 168 (279)
T 3sju_A 97 ERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAG--------WGRIVNIASTGGKQG 168 (279)
T ss_dssp HHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHT--------CEEEEEECCGGGTSC
T ss_pred HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcC--------CcEEEEECChhhccC
Confidence 9999999999999988878888899999999999999999999999999 577665 689999999999999
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc---------CChHHHHHHHhhhccCCCCCCH
Q 022386 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK---------LAPEEIRSKATDYMAAYKFGEK 233 (298)
Q Consensus 163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~ 233 (298)
.+....|++||+|++.|+++++.|++ ++||+||+|+||+++|++.... ...++..+.+....|.+++.+|
T Consensus 169 ~~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p 247 (279)
T 3sju_A 169 VMYAAPYTASKHGVVGFTKSVGFELA-KTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTP 247 (279)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCH
T ss_pred CCCChhHHHHHHHHHHHHHHHHHHHH-hhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCH
Confidence 99999999999999999999999998 7899999999999998764321 1345666777788899999999
Q ss_pred HHHHHHHHHhcCCCCCCccccEEEeCCCCCC
Q 022386 234 WDIAMAALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 234 ~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
+|+|++++||+++.++++||+.|.+|||.+.
T Consensus 248 edvA~~v~~L~s~~a~~itG~~i~vdGG~~~ 278 (279)
T 3sju_A 248 EEVAGLVGYLVTDAAASITAQALNVCGGLGN 278 (279)
T ss_dssp HHHHHHHHHHTSSGGGGCCSCEEEESTTCCC
T ss_pred HHHHHHHHHHhCccccCcCCcEEEECCCccC
Confidence 9999999999999999999999999999764
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-49 Score=338.48 Aligned_cols=250 Identities=29% Similarity=0.446 Sum_probs=225.0
Q ss_pred CCCCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCC-hhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHH
Q 022386 3 SPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVE 81 (298)
Q Consensus 3 ~~~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~ 81 (298)
.++.+.+|+||++|||||++|||+++|++|+++|++|++++++ .+.++++.+++.+.+.++.+++||++|+++++++++
T Consensus 9 ~~~~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 88 (270)
T 3is3_A 9 ETYIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFD 88 (270)
T ss_dssp --CCTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHH
T ss_pred cccCCCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence 4567788999999999999999999999999999999997664 566778888888888899999999999999999999
Q ss_pred HHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccc-cc
Q 022386 82 STINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL-HY 160 (298)
Q Consensus 82 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~-~~ 160 (298)
++.+.++++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|++ +|+||++||.. ..
T Consensus 89 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~----------~g~iv~isS~~~~~ 158 (270)
T 3is3_A 89 QAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE----------GGRIVLTSSNTSKD 158 (270)
T ss_dssp HHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT----------TCEEEEECCTTTTT
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc----------CCeEEEEeCchhcc
Confidence 99999999999999999988888889999999999999999999999999999965 48899999988 56
Q ss_pred cCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccC----------cCChHHHHHHHhhhccCCCC
Q 022386 161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS----------KLAPEEIRSKATDYMAAYKF 230 (298)
Q Consensus 161 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~----------~~~~~~~~~~~~~~~~~~~~ 230 (298)
.+.+....|++||+|++.|+++++.|++ ++|||||+|+||+++|++... ....++.........|.+++
T Consensus 159 ~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~ 237 (270)
T 3is3_A 159 FSVPKHSLYSGSKGAVDSFVRIFSKDCG-DKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRN 237 (270)
T ss_dssp CCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSC
T ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCC
Confidence 6778899999999999999999999998 889999999999999987542 22345556667778899999
Q ss_pred CCHHHHHHHHHHhcCCCCCCccccEEEeCCCCC
Q 022386 231 GEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW 263 (298)
Q Consensus 231 ~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~ 263 (298)
.+|+|+|++++||+++.++++||+.|.+|||..
T Consensus 238 ~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~ 270 (270)
T 3is3_A 238 GWPQDVANVVGFLVSKEGEWVNGKVLTLDGGAA 270 (270)
T ss_dssp BCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCC
T ss_pred CCHHHHHHHHHHHcCCccCCccCcEEEeCCCCC
Confidence 999999999999999999999999999999963
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-48 Score=332.54 Aligned_cols=245 Identities=28% Similarity=0.416 Sum_probs=225.1
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcC-ChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
++.+|++|||||++|||+++|++|+++|++|+++++ +.+..++..+++...+.++.+++||++|+++++++++++.+.+
T Consensus 1 Ml~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 80 (246)
T 3osu_A 1 MKMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF 80 (246)
T ss_dssp CCCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 367899999999999999999999999999999877 4567888888888888899999999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
+++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|++++ .|+||++||..+..+.++..
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~ 152 (246)
T 3osu_A 81 GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQR--------SGAIINLSSVVGAVGNPGQA 152 (246)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCHHHHHCCTTCH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--------CCEEEEEcchhhcCCCCCCh
Confidence 9999999999998888888999999999999999999999999999998876 68999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~ 247 (298)
.|++||++++.|+++++.|++ ++||+||+|+||+++|++.... .++..+......|.+++.+|+|+|++++||+++.
T Consensus 153 ~Y~~sK~a~~~~~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~ 229 (246)
T 3osu_A 153 NYVATKAGVIGLTKSAARELA-SRGITVNAVAPGFIVSDMTDAL--SDELKEQMLTQIPLARFGQDTDIANTVAFLASDK 229 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBGGGCCSCS--CHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGG
T ss_pred HHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEECCCcCCccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence 999999999999999999998 7899999999999999865432 3555667777889999999999999999999999
Q ss_pred CCCccccEEEeCCCCCC
Q 022386 248 GKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 248 ~~~~~G~~i~~dgG~~~ 264 (298)
+.++||+.|++|||.++
T Consensus 230 ~~~itG~~i~vdgG~~~ 246 (246)
T 3osu_A 230 AKYITGQTIHVNGGMYM 246 (246)
T ss_dssp GTTCCSCEEEESTTSCC
T ss_pred ccCCCCCEEEeCCCccC
Confidence 99999999999999753
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-49 Score=340.83 Aligned_cols=248 Identities=29% Similarity=0.403 Sum_probs=223.8
Q ss_pred CCCCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcC-ChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHH
Q 022386 3 SPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVE 81 (298)
Q Consensus 3 ~~~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~ 81 (298)
+.|+..+|+||++|||||++|||+++|++|+++|++|++++| +.+..+++.+++.+.+.++.++.||++|+++++++++
T Consensus 19 ~~m~~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~ 98 (269)
T 4dmm_A 19 SHMTALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFA 98 (269)
T ss_dssp -----CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHH
T ss_pred ccccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence 447778899999999999999999999999999999999888 5667788888888888899999999999999999999
Q ss_pred HHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc
Q 022386 82 STINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 161 (298)
Q Consensus 82 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~ 161 (298)
++.+.++++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|.+++ .|+||++||..+..
T Consensus 99 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~ 170 (269)
T 4dmm_A 99 AVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQR--------SGRIINIASVVGEM 170 (269)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CCEEEEECCHHHHH
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--------CcEEEEECchhhcC
Confidence 9999999999999999998778888899999999999999999999999999998876 68999999999999
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHH
Q 022386 162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241 (298)
Q Consensus 162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~ 241 (298)
+.+....|++||+|++.|+++++.|++ ++||+||+|+||+++|++... ...+......|.+++.+|+|+|++++
T Consensus 171 ~~~~~~~Y~asK~a~~~l~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~-----~~~~~~~~~~p~~r~~~~~dvA~~v~ 244 (269)
T 4dmm_A 171 GNPGQANYSAAKAGVIGLTKTVAKELA-SRGITVNAVAPGFIATDMTSE-----LAAEKLLEVIPLGRYGEAAEVAGVVR 244 (269)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBTTSCSCH-----HHHHHHGGGCTTSSCBCHHHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHh-hhCcEEEEEEECCCcCccccc-----ccHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 999999999999999999999999998 789999999999999886432 22245667789999999999999999
Q ss_pred HhcCC-CCCCccccEEEeCCCCCC
Q 022386 242 YLASD-AGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 242 ~L~s~-~~~~~~G~~i~~dgG~~~ 264 (298)
||+++ .+.++||+.|.+|||.++
T Consensus 245 ~l~s~~~~~~itG~~i~vdGG~~~ 268 (269)
T 4dmm_A 245 FLAADPAAAYITGQVINIDGGLVM 268 (269)
T ss_dssp HHHHCGGGGGCCSCEEEESTTSCC
T ss_pred HHhCCcccCCCcCCEEEECCCeec
Confidence 99998 788999999999999875
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-48 Score=338.22 Aligned_cols=249 Identities=27% Similarity=0.380 Sum_probs=219.6
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCC----------------hhHHHHHHHHHHhCCCCeEEEEccC
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR----------------KTVLRSAVAALHSLGIPAIGLEGDV 70 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~----------------~~~~~~~~~~~~~~~~~~~~~~~Dl 70 (298)
+.+|+||++|||||++|||+++|++|+++|++|++++|+ .+.+++..+++...+.++.+++||+
T Consensus 6 ~~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv 85 (286)
T 3uve_A 6 TGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDV 85 (286)
T ss_dssp CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCT
T ss_pred CcccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCC
Confidence 357899999999999999999999999999999999887 6677888888888888999999999
Q ss_pred CCHHHHHHHHHHHHHHhCCccEEEECCCCCCCC-CCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCc
Q 022386 71 RKREDAVRVVESTINHFGKLDILVNAAAGNFLV-PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGG 149 (298)
Q Consensus 71 s~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g 149 (298)
+|+++++++++++.+.++++|+||||||+.... ++.+.+.++|++++++|+.++++++++++|+|.+++. +|
T Consensus 86 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~-------~g 158 (286)
T 3uve_A 86 RDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGR-------GG 158 (286)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-------CE
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCC-------Cc
Confidence 999999999999999999999999999986655 4778899999999999999999999999999987531 58
Q ss_pred EEEEecccccccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc------------CChHHH
Q 022386 150 IIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK------------LAPEEI 217 (298)
Q Consensus 150 ~iv~vss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~------------~~~~~~ 217 (298)
+||++||..+..+.+....|++||+|++.|+++++.|++ ++||+||+|+||+++|++.... ...++.
T Consensus 159 ~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~ 237 (286)
T 3uve_A 159 SIILTSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELG-QHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDM 237 (286)
T ss_dssp EEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHH
T ss_pred EEEEECchhhccCCCCccHHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEecCcccCCcccccchhhhccccccccchhhH
Confidence 999999999999999999999999999999999999998 7899999999999999875421 011111
Q ss_pred HH--HHhhhccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCC
Q 022386 218 RS--KATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 218 ~~--~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
.. ......| +++.+|+|+|++++||+++.++++||+.|.+|||.++
T Consensus 238 ~~~~~~~~~~p-~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l 285 (286)
T 3uve_A 238 APICQMFHTLP-IPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL 285 (286)
T ss_dssp HHHHHTTCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHHHhhhccC-CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcccc
Confidence 11 1334455 7899999999999999999999999999999999875
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-49 Score=336.88 Aligned_cols=247 Identities=23% Similarity=0.308 Sum_probs=220.8
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
|.|.+|+||++|||||++|||++++++|+++|++|++++|+.+.++++.+++ +.++.++++|++|+++++++++++.
T Consensus 1 M~m~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (255)
T 4eso_A 1 MVMGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---GPRVHALRSDIADLNEIAVLGAAAG 77 (255)
T ss_dssp ---CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHH
Confidence 5677899999999999999999999999999999999999988887777666 4578999999999999999999999
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~ 164 (298)
+.++++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|++ +|+||++||..+..+.+
T Consensus 78 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~----------~g~iv~isS~~~~~~~~ 147 (255)
T 4eso_A 78 QTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE----------GGSIVFTSSVADEGGHP 147 (255)
T ss_dssp HHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE----------EEEEEEECCGGGSSBCT
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc----------CCEEEEECChhhcCCCC
Confidence 99999999999999988888889999999999999999999999999999865 48899999999999999
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCCh----HHHHHHHhhhccCCCCCCHHHHHHHH
Q 022386 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP----EEIRSKATDYMAAYKFGEKWDIAMAA 240 (298)
Q Consensus 165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~dva~~~ 240 (298)
....|++||+|++.|+++++.|++ ++||+||+|+||+++|++....... ++.........|.+++.+|+|+|+++
T Consensus 148 ~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v 226 (255)
T 4eso_A 148 GMSVYSASKAALVSFASVLAAELL-PRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAV 226 (255)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHTG-GGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHh-hhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCCCCcCHHHHHHHH
Confidence 999999999999999999999998 7899999999999999875432222 22334455678999999999999999
Q ss_pred HHhcCCCCCCccccEEEeCCCCCCCC
Q 022386 241 LYLASDAGKYVNGNTLIVDGGNWLSN 266 (298)
Q Consensus 241 ~~L~s~~~~~~~G~~i~~dgG~~~~~ 266 (298)
+||+++ ++++||+.|.+|||.....
T Consensus 227 ~~L~s~-~~~itG~~i~vdGG~~~~l 251 (255)
T 4eso_A 227 LFLAFE-ATFTTGAKLAVDGGLGQKL 251 (255)
T ss_dssp HHHHHT-CTTCCSCEEEESTTTTTTB
T ss_pred HHHcCc-CcCccCCEEEECCCccccC
Confidence 999998 8999999999999988753
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-48 Score=338.35 Aligned_cols=247 Identities=29% Similarity=0.412 Sum_probs=224.5
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
+.+|+||++|||||++|||+++|++|+++|++|++++|+ +..++..+++.+.+.++.++.||++|+++++++.+ ..+.
T Consensus 26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~-~~~~ 103 (273)
T 3uf0_A 26 PFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGGSAEAVVADLADLEGAANVAE-ELAA 103 (273)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHH-HHHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH-HHHh
Confidence 457899999999999999999999999999999999965 56777888888878889999999999999999954 4566
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
++++|++|||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+..+.+..
T Consensus 104 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~--------~g~IV~isS~~~~~~~~~~ 175 (273)
T 3uf0_A 104 TRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG--------SGRIVTIASMLSFQGGRNV 175 (273)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCSSC
T ss_pred cCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--------CCEEEEEcchHhcCCCCCC
Confidence 79999999999998888888999999999999999999999999999998876 6999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
..|++||+|++.|+++++.|++ ++||+||+|+||+++|++.......++....+....|.+++.+|+|+|++++||+++
T Consensus 176 ~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~ 254 (273)
T 3uf0_A 176 AAYAASKHAVVGLTRALASEWA-GRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASD 254 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTTSSCBCGGGGHHHHHHHHSG
T ss_pred hhHHHHHHHHHHHHHHHHHHHh-hcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence 9999999999999999999998 789999999999999987655444456666777888999999999999999999999
Q ss_pred CCCCccccEEEeCCCCCC
Q 022386 247 AGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 247 ~~~~~~G~~i~~dgG~~~ 264 (298)
.+.++||+.|.+|||..+
T Consensus 255 ~a~~itG~~i~vdGG~~~ 272 (273)
T 3uf0_A 255 AASYVHGQVLAVDGGWLA 272 (273)
T ss_dssp GGTTCCSCEEEESTTGGG
T ss_pred hhcCCcCCEEEECcCccC
Confidence 999999999999999765
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-48 Score=333.55 Aligned_cols=245 Identities=29% Similarity=0.402 Sum_probs=219.8
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
.+|+||++|||||++|||++++++|+++|++|++++|+.+.+++..+++ +.++.+++||++|+++++++++++.+.+
T Consensus 2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 78 (247)
T 3rwb_A 2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---GKKARAIAADISDPGSVKALFAEIQALT 78 (247)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 5789999999999999999999999999999999999998887777666 6679999999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
+++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|++++. .|+||++||..+..+.+...
T Consensus 79 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~ 151 (247)
T 3rwb_A 79 GGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGK-------AGRVISIASNTFFAGTPNMA 151 (247)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-------CEEEEEECCTHHHHTCTTCH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC-------CcEEEEECchhhccCCCCch
Confidence 99999999999988888889999999999999999999999999999987641 48999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~ 247 (298)
.|++||+|++.|+++++.|++ ++|||||+|+||+++|++.... ..+..........+.+++.+|+|+|+++.||+++.
T Consensus 152 ~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~r~~~pedva~~v~~L~s~~ 229 (247)
T 3rwb_A 152 AYVAAKGGVIGFTRALATELG-KYNITANAVTPGLIESDGVKAS-PHNEAFGFVEMLQAMKGKGQPEHIADVVSFLASDD 229 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHTS-GGGGGHHHHHHHSSSCSCBCHHHHHHHHHHHHSGG
T ss_pred hhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCcCcCcccccc-ChhHHHHHHhcccccCCCcCHHHHHHHHHHHhCcc
Confidence 999999999999999999998 8899999999999998765432 22222222333378899999999999999999999
Q ss_pred CCCccccEEEeCCCCCC
Q 022386 248 GKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 248 ~~~~~G~~i~~dgG~~~ 264 (298)
++++||+.|.+|||...
T Consensus 230 ~~~itG~~i~vdGG~~~ 246 (247)
T 3rwb_A 230 ARWITGQTLNVDAGMVR 246 (247)
T ss_dssp GTTCCSCEEEESTTSSC
T ss_pred ccCCCCCEEEECCCccC
Confidence 99999999999999753
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-48 Score=335.08 Aligned_cols=250 Identities=29% Similarity=0.451 Sum_probs=223.9
Q ss_pred CCCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHH
Q 022386 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 4 ~~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
.+..++|++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++ +.++.++++|++|+++++++++++
T Consensus 19 ~~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~ 95 (277)
T 4dqx_A 19 YFQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI---GSKAFGVRVDVSSAKDAESMVEKT 95 (277)
T ss_dssp ---CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHH
T ss_pred ccccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHH
Confidence 35556899999999999999999999999999999999999988777776654 567999999999999999999999
Q ss_pred HHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
.+.++++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|++++ .|+||++||..+..+.
T Consensus 96 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~ 167 (277)
T 4dqx_A 96 TAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNG--------GGSIINTTSYTATSAI 167 (277)
T ss_dssp HHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTT--------CEEEEEECCGGGTSCC
T ss_pred HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--------CcEEEEECchhhCcCC
Confidence 99999999999999988888888999999999999999999999999999998765 6899999999999999
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc----CChHHHHHHHhhhccCCCCCCHHHHHHH
Q 022386 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK----LAPEEIRSKATDYMAAYKFGEKWDIAMA 239 (298)
Q Consensus 164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (298)
+....|++||+|++.|+++++.|++ ++||+||+|+||+++|++.... .........+....+.+++.+|+|+|++
T Consensus 168 ~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~ 246 (277)
T 4dqx_A 168 ADRTAYVASKGAISSLTRAMAMDHA-KEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEA 246 (277)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHH
T ss_pred CCChhHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcccCCcCHHHHHHH
Confidence 9999999999999999999999998 7899999999999998863221 1223333446677889999999999999
Q ss_pred HHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 240 ALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 240 ~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
++||+++.+.++||+.|.+|||.++.
T Consensus 247 v~~L~s~~~~~itG~~i~vdGG~~~~ 272 (277)
T 4dqx_A 247 MLFLASDRSRFATGSILTVDGGSSIG 272 (277)
T ss_dssp HHHHHSGGGTTCCSCEEEESSSSSSC
T ss_pred HHHHhCCccCCCcCCEEEECCchhhh
Confidence 99999999999999999999998875
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-48 Score=337.75 Aligned_cols=248 Identities=25% Similarity=0.375 Sum_probs=225.7
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
++.+|+||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.+.+.++.+++||++|+++++++++++.+
T Consensus 26 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 105 (276)
T 3r1i_A 26 DLFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTG 105 (276)
T ss_dssp GGGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 34589999999999999999999999999999999999999999999999988888999999999999999999999999
Q ss_pred HhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC--
Q 022386 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-- 163 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~-- 163 (298)
+++++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|.+++. +|+||++||..+..+.
T Consensus 106 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~-------~g~iv~isS~~~~~~~~~ 178 (276)
T 3r1i_A 106 ELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGL-------GGTIITTASMSGHIINIP 178 (276)
T ss_dssp HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-------CEEEEEECCGGGTSCCCS
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-------CcEEEEECchHhcccCCC
Confidence 9999999999999988888888999999999999999999999999999987642 4899999999887654
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHh
Q 022386 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (298)
Q Consensus 164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L 243 (298)
+....|++||+|++.|+++++.|++ ++||+||+|+||+|+|++.... .+.........|.+++.+|+|+|++++||
T Consensus 179 ~~~~~Y~asKaa~~~l~~~la~e~~-~~gIrvn~v~PG~v~T~~~~~~---~~~~~~~~~~~p~~r~~~pedvA~~v~fL 254 (276)
T 3r1i_A 179 QQVSHYCTSKAAVVHLTKAMAVELA-PHQIRVNSVSPGYIRTELVEPL---ADYHALWEPKIPLGRMGRPEELTGLYLYL 254 (276)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCSTTTGGG---GGGHHHHGGGSTTSSCBCGGGSHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHh-hcCcEEEEEeeCCCcCCccccc---hHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 3578899999999999999999998 7899999999999999875432 23445566778999999999999999999
Q ss_pred cCCCCCCccccEEEeCCCCCC
Q 022386 244 ASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 244 ~s~~~~~~~G~~i~~dgG~~~ 264 (298)
+++.++++||+.|.+|||.+.
T Consensus 255 ~s~~~~~itG~~i~vdGG~~~ 275 (276)
T 3r1i_A 255 ASAASSYMTGSDIVIDGGYTC 275 (276)
T ss_dssp HSGGGTTCCSCEEEESTTTTC
T ss_pred cCccccCccCcEEEECcCccC
Confidence 999999999999999999764
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-48 Score=332.96 Aligned_cols=247 Identities=31% Similarity=0.414 Sum_probs=222.9
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
|.+|+||++|||||++|||++++++|+++|++|++++|+.+.+++..+++ +.++.+++||++|+++++++++++.++
T Consensus 3 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~ 79 (259)
T 4e6p_A 3 MKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---GPAAYAVQMDVTRQDSIDAAIAATVEH 79 (259)
T ss_dssp -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999988887777666 556899999999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
++++|++|||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++. +|+||++||..+..+.+..
T Consensus 80 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~ 152 (259)
T 4e6p_A 80 AGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGR-------GGKIINMASQAGRRGEALV 152 (259)
T ss_dssp SSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-------CEEEEEECCGGGTSCCTTB
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-------CeEEEEECChhhccCCCCC
Confidence 999999999999887788888999999999999999999999999999987531 5899999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc---------CChHHHHHHHhhhccCCCCCCHHHHH
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK---------LAPEEIRSKATDYMAAYKFGEKWDIA 237 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva 237 (298)
..|++||++++.|+++++.|++ ++||+||+|+||+++|++.... ...++.........|.+++.+|+|+|
T Consensus 153 ~~Y~asK~a~~~~~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva 231 (259)
T 4e6p_A 153 AIYCATKAAVISLTQSAGLDLI-KHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLT 231 (259)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhh-hcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHH
Confidence 9999999999999999999998 7899999999999999864322 01334455667778999999999999
Q ss_pred HHHHHhcCCCCCCccccEEEeCCCCCC
Q 022386 238 MAALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 238 ~~~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
++++||+++.++++||+.|++|||.++
T Consensus 232 ~~v~~L~s~~~~~itG~~i~vdgG~~~ 258 (259)
T 4e6p_A 232 GMAIFLASAESDYIVSQTYNVDGGNWM 258 (259)
T ss_dssp HHHHHTTSGGGTTCCSCEEEESTTSSC
T ss_pred HHHHHHhCCccCCCCCCEEEECcChhc
Confidence 999999999999999999999999875
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-48 Score=333.55 Aligned_cols=245 Identities=30% Similarity=0.448 Sum_probs=221.5
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
+.+|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++ +.++.++.||++|+++++++++++.+.
T Consensus 6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 82 (271)
T 3tzq_B 6 TAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV---GRGAVHHVVDLTNEVSVRALIDFTIDT 82 (271)
T ss_dssp -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCCeEEEECCCCCHHHHHHHHHHHHHH
Confidence 34789999999999999999999999999999999999988888777766 567899999999999999999999999
Q ss_pred hCCccEEEECCCCC-C-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC
Q 022386 87 FGKLDILVNAAAGN-F-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (298)
Q Consensus 87 ~~~id~li~~ag~~-~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~ 164 (298)
++++|++|||||+. . ..++.+.+.++|++.+++|+.++++++++++|+|++++ .|+||++||..+..+.+
T Consensus 83 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~--------~g~iv~isS~~~~~~~~ 154 (271)
T 3tzq_B 83 FGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAG--------GGAIVNISSATAHAAYD 154 (271)
T ss_dssp HSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--------CEEEEEECCGGGTSBCS
T ss_pred cCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--------CCEEEEECCHHHcCCCC
Confidence 99999999999976 2 45567889999999999999999999999999999876 69999999999999999
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhc
Q 022386 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (298)
Q Consensus 165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~ 244 (298)
....|++||++++.|+++++.|++ ++||+||+|+||+++|++..... +++....+....+.+++.+|+|+|++++||+
T Consensus 155 ~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~ 232 (271)
T 3tzq_B 155 MSTAYACTKAAIETLTRYVATQYG-RHGVRCNAIAPGLVRTPRLEVGL-PQPIVDIFATHHLAGRIGEPHEIAELVCFLA 232 (271)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCCTTTC----CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHHHh-hcCEEEEEEEeCCCcCccccccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence 999999999999999999999998 88999999999999998765333 3555667777889999999999999999999
Q ss_pred CCCCCCccccEEEeCCCCCCC
Q 022386 245 SDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 245 s~~~~~~~G~~i~~dgG~~~~ 265 (298)
++.+.++||+.|.+||| ++.
T Consensus 233 s~~~~~itG~~i~vdGG-~~~ 252 (271)
T 3tzq_B 233 SDRAAFITGQVIAADSG-LLA 252 (271)
T ss_dssp SGGGTTCCSCEEEESTT-TTT
T ss_pred CcccCCcCCCEEEECCC-ccc
Confidence 99999999999999999 553
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-49 Score=339.63 Aligned_cols=249 Identities=24% Similarity=0.340 Sum_probs=216.9
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
|+..+|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++ +.++.+++||++|+++++++++++.
T Consensus 22 m~~~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~ 98 (277)
T 3gvc_A 22 MNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GCGAAACRVDVSDEQQIIAMVDACV 98 (277)
T ss_dssp -----CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCcceEEEecCCCHHHHHHHHHHHH
Confidence 5666899999999999999999999999999999999999988887777666 6678999999999999999999999
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~ 164 (298)
+.++++|++|||||+....++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+..+.+
T Consensus 99 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~--------~g~Iv~isS~~~~~~~~ 170 (277)
T 3gvc_A 99 AAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERG--------GGAIVNLSSLAGQVAVG 170 (277)
T ss_dssp HHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--------CEEEEEECCGGGTSCCT
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--------CcEEEEEcchhhccCCC
Confidence 9999999999999998888888999999999999999999999999999999876 69999999999999999
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC--hHHHHHHHhh---hccCCCCCCHHHHHHH
Q 022386 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATD---YMAAYKFGEKWDIAMA 239 (298)
Q Consensus 165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~--~~~~~~~~~~---~~~~~~~~~~~dva~~ 239 (298)
....|++||+|++.|+++++.|++ ++||+||+|+||+++|++...... .......... ..+.+++.+|+|+|++
T Consensus 171 ~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~ 249 (277)
T 3gvc_A 171 GTGAYGMSKAGIIQLSRITAAELR-SSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGI 249 (277)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHHSSCBCHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccccCCCCHHHHHHH
Confidence 999999999999999999999998 889999999999999886432111 1111111112 4567889999999999
Q ss_pred HHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 240 ALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 240 ~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
++||+++.++++||+.|.+|||....
T Consensus 250 v~~L~s~~a~~itG~~i~vdGG~~~~ 275 (277)
T 3gvc_A 250 VVFLLSDDASMITGTTQIADGGTIAA 275 (277)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred HHHHcCCccCCccCcEEEECCcchhc
Confidence 99999999999999999999997764
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-48 Score=337.40 Aligned_cols=248 Identities=28% Similarity=0.417 Sum_probs=219.0
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCC------------hhHHHHHHHHHHhCCCCeEEEEccCCCHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR------------KTVLRSAVAALHSLGIPAIGLEGDVRKRED 75 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 75 (298)
.+|+||++|||||++|||+++|+.|+++|++|++++|+ .+.+++..+++...+.++.+++||++|+++
T Consensus 24 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 103 (299)
T 3t7c_A 24 GKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDA 103 (299)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred cccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence 47899999999999999999999999999999999987 677888888888888899999999999999
Q ss_pred HHHHHHHHHHHhCCccEEEECCCCCCCCC-CCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEe
Q 022386 76 AVRVVESTINHFGKLDILVNAAAGNFLVP-AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI 154 (298)
Q Consensus 76 ~~~~~~~~~~~~~~id~li~~ag~~~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~v 154 (298)
++++++++.+.++++|+||||||+..... +.+.+.++|++.+++|+.++++++++++|+|.+++. .|+||++
T Consensus 104 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~-------~g~Iv~i 176 (299)
T 3t7c_A 104 MQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKR-------GGSIVFT 176 (299)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTS-------CEEEEEE
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-------CcEEEEE
Confidence 99999999999999999999999876554 888999999999999999999999999999887531 5899999
Q ss_pred cccccccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC------------ChHHHH--HH
Q 022386 155 SATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL------------APEEIR--SK 220 (298)
Q Consensus 155 ss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~------------~~~~~~--~~ 220 (298)
||..+..+.+....|++||+|++.|+++++.|++ ++||+||+|+||+++|++..... ..++.. ..
T Consensus 177 sS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (299)
T 3t7c_A 177 SSIGGLRGAENIGNYIASKHGLHGLMRTMALELG-PRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASR 255 (299)
T ss_dssp CCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHH
T ss_pred CChhhccCCCCcchHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhh
Confidence 9999999999999999999999999999999998 78999999999999998754210 011111 11
Q ss_pred HhhhccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCC
Q 022386 221 ATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 221 ~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
.....+ +++.+|+|+|++++||+++.++++||+.|.+|||.++
T Consensus 256 ~~~~~p-~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l 298 (299)
T 3t7c_A 256 QMHVLP-IPYVEPADISNAILFLVSDDARYITGVSLPVDGGALL 298 (299)
T ss_dssp HHSSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred hhcccC-cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCccc
Confidence 233345 7789999999999999999999999999999999875
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-48 Score=336.18 Aligned_cols=250 Identities=28% Similarity=0.371 Sum_probs=215.7
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcC-ChhHHHHHHHHHHhC-CCCeEEEEccCCCHHHHHHHHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
.+.+|++|++|||||++|||+++|++|+++|++|++++| +.+.+++..+++... +.++.++.||++|+++++++++++
T Consensus 19 ~~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 98 (281)
T 3v2h_A 19 YFQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMV 98 (281)
T ss_dssp ---CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHH
T ss_pred hhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHH
Confidence 366889999999999999999999999999999999999 566777777887765 678999999999999999999999
Q ss_pred HHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
.+.++++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+..+.
T Consensus 99 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~ 170 (281)
T 3v2h_A 99 ADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKG--------WGRIINIASAHGLVAS 170 (281)
T ss_dssp HHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCC
T ss_pred HHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--------CCEEEEECCcccccCC
Confidence 99999999999999998888888899999999999999999999999999999876 6999999999999999
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCCh---------HH-HHHHHhhhccCCCCCCH
Q 022386 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP---------EE-IRSKATDYMAAYKFGEK 233 (298)
Q Consensus 164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~---------~~-~~~~~~~~~~~~~~~~~ 233 (298)
+....|++||+|++.|+++++.|++ ++||+||+|+||+++|++....... ++ ..+.+....+.+++.+|
T Consensus 171 ~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~ 249 (281)
T 3v2h_A 171 PFKSAYVAAKHGIMGLTKTVALEVA-ESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITV 249 (281)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCC----------------------------CCTTCSCBCH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCH
Confidence 9999999999999999999999998 7899999999999999875443221 11 11234566788999999
Q ss_pred HHHHHHHHHhcCCCCCCccccEEEeCCCCCC
Q 022386 234 WDIAMAALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 234 ~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
+|+|++++||+++.+.++||+.|.+|||.++
T Consensus 250 edvA~~v~~L~s~~a~~itG~~i~vdGG~~~ 280 (281)
T 3v2h_A 250 EQVASLALYLAGDDAAQITGTHVSMDGGWTA 280 (281)
T ss_dssp HHHHHHHHHHHSSGGGGCCSCEEEESTTGGG
T ss_pred HHHHHHHHHHcCCCcCCCCCcEEEECCCccC
Confidence 9999999999999999999999999999764
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-48 Score=336.01 Aligned_cols=246 Identities=29% Similarity=0.396 Sum_probs=213.7
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEE-cCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
|..++++||++|||||++|||+++|++|+++|++|+++ .++.+..+++.+++...+.++.+++||++|+++++++++++
T Consensus 20 ~~~m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 99 (267)
T 3u5t_A 20 FQSMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATA 99 (267)
T ss_dssp -------CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred ccccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 44557889999999999999999999999999999987 55666788888888888889999999999999999999999
Q ss_pred HHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
.+.++++|++|||||+....++.+.+.++|++.+++|+.++++++++++|.|++ +|+||++||..+..+.
T Consensus 100 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~----------~g~iv~isS~~~~~~~ 169 (267)
T 3u5t_A 100 EEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV----------GGRIINMSTSQVGLLH 169 (267)
T ss_dssp HHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE----------EEEEEEECCTHHHHCC
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh----------CCeEEEEeChhhccCC
Confidence 999999999999999988888889999999999999999999999999999965 4889999999999899
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHh
Q 022386 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (298)
Q Consensus 164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L 243 (298)
+....|++||+|++.|+++++.|++ ++||+||+|+||+++|++.... ..++..+.+....|.+++.+|+|+|++++||
T Consensus 170 ~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L 247 (267)
T 3u5t_A 170 PSYGIYAAAKAGVEAMTHVLSKELR-GRDITVNAVAPGPTATDLFLEG-KSDEVRDRFAKLAPLERLGTPQDIAGAVAFL 247 (267)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTT-TSCCEEEEEEECCBC------------CHHHHHTSSTTCSCBCHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhh-hhCCEEEEEEECCCcCcccccc-CCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 9999999999999999999999998 8899999999999999875443 2334455667778999999999999999999
Q ss_pred cCCCCCCccccEEEeCCCC
Q 022386 244 ASDAGKYVNGNTLIVDGGN 262 (298)
Q Consensus 244 ~s~~~~~~~G~~i~~dgG~ 262 (298)
+++.+.++||+.|.+|||.
T Consensus 248 ~s~~~~~itG~~i~vdGG~ 266 (267)
T 3u5t_A 248 AGPDGAWVNGQVLRANGGI 266 (267)
T ss_dssp HSTTTTTCCSEEEEESSSC
T ss_pred hCccccCccCCEEEeCCCc
Confidence 9999999999999999995
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-48 Score=335.33 Aligned_cols=250 Identities=24% Similarity=0.373 Sum_probs=208.9
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEE-cCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
|++.+|+||++|||||++|||+++|++|+++|++|+++ .++.+..++..+++.+.+.++.++.||++|+++++++++++
T Consensus 1 M~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 80 (259)
T 3edm_A 1 MSLQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAA 80 (259)
T ss_dssp ---CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence 56788999999999999999999999999999999998 66677778888888888888999999999999999999999
Q ss_pred HHHhCCccEEEECCCCC-CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc-c
Q 022386 84 INHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-T 161 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~-~ 161 (298)
.+.+|++|++|||||.. ...++.+.+.++|++.+++|+.++++++++++|+|++ +|+||++||..+. .
T Consensus 81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~----------~g~iv~isS~~~~~~ 150 (259)
T 3edm_A 81 ADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK----------GGAIVTFSSQAGRDG 150 (259)
T ss_dssp HHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE----------EEEEEEECCHHHHHC
T ss_pred HHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCEEEEEcCHHhccC
Confidence 99999999999999976 6678889999999999999999999999999999975 4889999999988 6
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHH
Q 022386 162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241 (298)
Q Consensus 162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~ 241 (298)
+.+....|++||+|++.|+++++.|++ +. ||||+|+||+++|++.... ..++..+......+.+++.+|+|+|++++
T Consensus 151 ~~~~~~~Y~asKaa~~~l~~~la~e~~-~~-I~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~p~~r~~~pedva~~v~ 227 (259)
T 3edm_A 151 GGPGALAYATSKGAVMTFTRGLAKEVG-PK-IRVNAVCPGMISTTFHDTF-TKPEVRERVAGATSLKREGSSEDVAGLVA 227 (259)
T ss_dssp CSTTCHHHHHHHHHHHHHHHHHHHHHT-TT-CEEEEEEECCBCC-----------------------CCBCHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHC-CC-CEEEEEEECCCcCcccccc-cChHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 788899999999999999999999997 65 9999999999999865443 23445556667788999999999999999
Q ss_pred HhcCCCCCCccccEEEeCCCCCCCCC
Q 022386 242 YLASDAGKYVNGNTLIVDGGNWLSNP 267 (298)
Q Consensus 242 ~L~s~~~~~~~G~~i~~dgG~~~~~~ 267 (298)
||+++.+.++||+.|.+|||.....+
T Consensus 228 ~L~s~~~~~itG~~i~vdGg~~~~~~ 253 (259)
T 3edm_A 228 FLASDDAAYVTGACYDINGGVLFSEG 253 (259)
T ss_dssp HHHSGGGTTCCSCEEEESBCSSBC--
T ss_pred HHcCccccCccCCEEEECCCcCCCCC
Confidence 99999999999999999999887543
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-48 Score=336.71 Aligned_cols=249 Identities=29% Similarity=0.439 Sum_probs=218.7
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcC-------------ChhHHHHHHHHHHhCCCCeEEEEccCCCH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-------------RKTVLRSAVAALHSLGIPAIGLEGDVRKR 73 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r-------------~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 73 (298)
+.+|+||++|||||++|||+++|++|+++|++|++++| +.+.+++..+.+...+.++.++.||++|+
T Consensus 6 ~~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 85 (277)
T 3tsc_A 6 AGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDF 85 (277)
T ss_dssp -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred ccccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCH
Confidence 35799999999999999999999999999999999998 66777888888888888999999999999
Q ss_pred HHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEE
Q 022386 74 EDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIIN 153 (298)
Q Consensus 74 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~ 153 (298)
++++++++++.+.++++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|.+++. +|+||+
T Consensus 86 ~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~-------~g~iv~ 158 (277)
T 3tsc_A 86 DRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGR-------GGSIIL 158 (277)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-------CEEEEE
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC-------CCEEEE
Confidence 9999999999999999999999999988788888999999999999999999999999999987631 589999
Q ss_pred ecccccccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC---------hHHHHHHHhhh
Q 022386 154 ISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---------PEEIRSKATDY 224 (298)
Q Consensus 154 vss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~---------~~~~~~~~~~~ 224 (298)
+||..+..+.+....|++||+|++.|+++++.|++ ++||+||+|+||+++|++...... .++........
T Consensus 159 isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (277)
T 3tsc_A 159 ISSAAGMKMQPFMIHYTASKHAVTGLARAFAAELG-KHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPF 237 (277)
T ss_dssp ECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCS
T ss_pred EccHhhCCCCCCchhhHHHHHHHHHHHHHHHHHhC-ccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhc
Confidence 99999999999999999999999999999999998 889999999999999986532110 01111112223
Q ss_pred ccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCC
Q 022386 225 MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 225 ~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
.+. ++.+|+|+|++++||+++.++++||+.|.+|||.++
T Consensus 238 ~p~-r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~ 276 (277)
T 3tsc_A 238 LPD-WVAEPEDIADTVCWLASDESRKVTAAQIPVDQGSTQ 276 (277)
T ss_dssp SSC-SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred cCC-CCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCccc
Confidence 344 689999999999999999999999999999999764
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-48 Score=336.01 Aligned_cols=251 Identities=25% Similarity=0.339 Sum_probs=203.3
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcC-ChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
|.++++|++|||||++|||+++|++|+++|++|+++++ +.+.+++..+++...+.++.+++||++|+++++++++++.+
T Consensus 24 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 103 (280)
T 4da9_A 24 MTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVA 103 (280)
T ss_dssp CSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHH
T ss_pred hhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 45788999999999999999999999999999999985 67778888888888888999999999999999999999999
Q ss_pred HhCCccEEEECCCC--CCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 86 HFGKLDILVNAAAG--NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 86 ~~~~id~li~~ag~--~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
.++++|++|||||+ ....++.+.+.++|++.+++|+.++++++++++|.|.+++.. ..|+||++||..+..+.
T Consensus 104 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~-----~~g~Iv~isS~~~~~~~ 178 (280)
T 4da9_A 104 EFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDAR-----ASRSIINITSVSAVMTS 178 (280)
T ss_dssp HHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCC-----CCEEEEEECCC------
T ss_pred HcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCC-----CCCEEEEEcchhhccCC
Confidence 99999999999998 455778888999999999999999999999999999875411 15899999999999999
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhh-hccCCCCCCHHHHHHHHHH
Q 022386 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD-YMAAYKFGEKWDIAMAALY 242 (298)
Q Consensus 164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dva~~~~~ 242 (298)
+....|++||+|++.|+++++.|++ ++||+||+|+||+++|++..... ++....... ..|.+++.+|+|+|++++|
T Consensus 179 ~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~p~~r~~~pedvA~~v~~ 255 (280)
T 4da9_A 179 PERLDYCMSKAGLAAFSQGLALRLA-ETGIAVFEVRPGIIRSDMTAAVS--GKYDGLIESGLVPMRRWGEPEDIGNIVAG 255 (280)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHT-TTTEEEEEEEECCBCC------------------------CCBCHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHH-HhCcEEEEEeecCCcCCchhhcc--hhHHHHHhhcCCCcCCcCCHHHHHHHHHH
Confidence 9999999999999999999999998 88999999999999998654332 222222333 6788999999999999999
Q ss_pred hcCCCCCCccccEEEeCCCCCCC
Q 022386 243 LASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 243 L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
|+++.++++||++|.+|||.++.
T Consensus 256 L~s~~~~~itG~~i~vdGG~~~~ 278 (280)
T 4da9_A 256 LAGGQFGFATGSVIQADGGLSIG 278 (280)
T ss_dssp HHTSTTGGGTTCEEEESTTCC--
T ss_pred HhCccccCCCCCEEEECCCcccC
Confidence 99999999999999999998764
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-48 Score=335.19 Aligned_cols=250 Identities=26% Similarity=0.338 Sum_probs=218.5
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcC-------------ChhHHHHHHHHHHhCCCCeEEEEccCCC
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-------------RKTVLRSAVAALHSLGIPAIGLEGDVRK 72 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r-------------~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 72 (298)
.|.+|+||++|||||++|||+++|++|+++|++|++++| +.+.+++..+.+.+.+.++.++.||++|
T Consensus 9 ~~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 88 (280)
T 3pgx_A 9 QAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRD 88 (280)
T ss_dssp --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred cccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCC
Confidence 456799999999999999999999999999999999998 6777888888888888899999999999
Q ss_pred HHHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEE
Q 022386 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIII 152 (298)
Q Consensus 73 ~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv 152 (298)
+++++++++++.+.++++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|++++. +|+||
T Consensus 89 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~-------~g~iv 161 (280)
T 3pgx_A 89 DAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGN-------GGSIV 161 (280)
T ss_dssp HHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCS-------CEEEE
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC-------CCEEE
Confidence 99999999999999999999999999988788888999999999999999999999999999987631 58999
Q ss_pred EecccccccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHH------H--Hhhh
Q 022386 153 NISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS------K--ATDY 224 (298)
Q Consensus 153 ~vss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~------~--~~~~ 224 (298)
++||..+..+.+....|++||+|++.|+++++.|++ ++||+||+|+||+++|++.......+.... . ....
T Consensus 162 ~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (280)
T 3pgx_A 162 VVSSSAGLKATPGNGHYSASKHGLTALTNTLAIELG-EYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPV 240 (280)
T ss_dssp EECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCCBTT
T ss_pred EEcchhhccCCCCchhHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhhccc
Confidence 999999999999999999999999999999999998 889999999999999986532110000000 0 1122
Q ss_pred ccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCC
Q 022386 225 MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 225 ~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
.+. ++.+|+|+|++++||+++.++++||+.|.+|||...
T Consensus 241 ~~~-r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~ 279 (280)
T 3pgx_A 241 QPN-GFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGALK 279 (280)
T ss_dssp BCS-SCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTGGG
T ss_pred CCC-CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence 344 688999999999999999999999999999999753
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-48 Score=332.85 Aligned_cols=245 Identities=30% Similarity=0.415 Sum_probs=220.5
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCC-hhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
|+..+|+||++|||||++|||+++|++|+++|++|++++++ .+..+++.+++.+.+.++.++.||++|+++++++++++
T Consensus 24 m~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 103 (271)
T 3v2g_A 24 MTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRET 103 (271)
T ss_dssp HTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 45567999999999999999999999999999999998665 56678888888888889999999999999999999999
Q ss_pred HHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC-
Q 022386 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA- 162 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~- 162 (298)
.+.+|++|++|||||+....++.+.+.++|++.+++|+.++++++++++|.|++ .|+||++||..+..+
T Consensus 104 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~----------~g~iv~isS~~~~~~~ 173 (271)
T 3v2g_A 104 VEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD----------GGRIITIGSNLAELVP 173 (271)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT----------TCEEEEECCGGGTCCC
T ss_pred HHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc----------CCEEEEEeChhhccCC
Confidence 999999999999999988888889999999999999999999999999999964 588999999777655
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHH
Q 022386 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (298)
Q Consensus 163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 242 (298)
.+....|++||+|++.|+++++.|++ ++||+||+|+||+++|++.... .+..+......+.+++.+|+|+|++++|
T Consensus 174 ~~~~~~Y~asKaa~~~l~~~la~e~~-~~gIrvn~v~PG~v~T~~~~~~---~~~~~~~~~~~~~~r~~~pedvA~~v~f 249 (271)
T 3v2g_A 174 WPGISLYSASKAALAGLTKGLARDLG-PRGITVNIVHPGSTDTDMNPAD---GDHAEAQRERIATGSYGEPQDIAGLVAW 249 (271)
T ss_dssp STTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCSSSSCSS---CSSHHHHHHTCTTSSCBCHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEecCCCcCCccccc---chhHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 67889999999999999999999998 7899999999999999875442 2233445567889999999999999999
Q ss_pred hcCCCCCCccccEEEeCCCCC
Q 022386 243 LASDAGKYVNGNTLIVDGGNW 263 (298)
Q Consensus 243 L~s~~~~~~~G~~i~~dgG~~ 263 (298)
|+++.+.++||+.|.+|||.+
T Consensus 250 L~s~~~~~itG~~i~vdGG~~ 270 (271)
T 3v2g_A 250 LAGPQGKFVTGASLTIDGGAN 270 (271)
T ss_dssp HHSGGGTTCCSCEEEESTTTT
T ss_pred HhCcccCCccCCEEEeCcCcc
Confidence 999999999999999999975
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-47 Score=325.84 Aligned_cols=245 Identities=30% Similarity=0.356 Sum_probs=227.7
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
+|++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+.++.++.||++|+++++++++++.+.++
T Consensus 2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (247)
T 3lyl_A 2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENL 81 (247)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 57899999999999999999999999999999999999999999999988888999999999999999999999999999
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchh
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~ 168 (298)
++|++|||||+....++.+.+.++|++.+++|+.+++++++.++|.|.+++ .|+||++||..+..+.+....
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~ 153 (247)
T 3lyl_A 82 AIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKR--------WGRIISIGSVVGSAGNPGQTN 153 (247)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCTHHHHCCTTCHH
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--------CeEEEEEcchhhccCCCCcHH
Confidence 999999999988778888889999999999999999999999999998876 689999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCC
Q 022386 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (298)
Q Consensus 169 Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~ 248 (298)
|++||++++.|+++++.|++ ++||+||+|+||+++|++.... .++.........+.+++.+|+|+|+++.||+++.+
T Consensus 154 Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~ 230 (247)
T 3lyl_A 154 YCAAKAGVIGFSKSLAYEVA-SRNITVNVVAPGFIATDMTDKL--TDEQKSFIATKIPSGQIGEPKDIAAAVAFLASEEA 230 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCTTTTTS--CHHHHHHHHTTSTTCCCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHHHHHHH-HcCeEEEEEeeCcEecccchhc--cHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhCCCc
Confidence 99999999999999999998 7899999999999998865443 34455666777899999999999999999999999
Q ss_pred CCccccEEEeCCCCCC
Q 022386 249 KYVNGNTLIVDGGNWL 264 (298)
Q Consensus 249 ~~~~G~~i~~dgG~~~ 264 (298)
.+++|+.|++|||.++
T Consensus 231 ~~~tG~~i~vdgG~~~ 246 (247)
T 3lyl_A 231 KYITGQTLHVNGGMYM 246 (247)
T ss_dssp TTCCSCEEEESTTSSC
T ss_pred CCccCCEEEECCCEec
Confidence 9999999999999875
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-47 Score=328.55 Aligned_cols=249 Identities=27% Similarity=0.378 Sum_probs=220.9
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
.+|++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+.++.++.||++|+++++++++++.+.|
T Consensus 17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 96 (273)
T 1ae1_A 17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF 96 (273)
T ss_dssp CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 35889999999999999999999999999999999999988888888887777889999999999999999999999999
Q ss_pred -CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 88 -GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 88 -~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
+++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|++++ .|+||++||..+..+.+..
T Consensus 97 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~--------~g~iv~isS~~~~~~~~~~ 168 (273)
T 1ae1_A 97 DGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ--------NGNVIFLSSIAGFSALPSV 168 (273)
T ss_dssp TSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------SEEEEEECCGGGTSCCTTC
T ss_pred CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--------CcEEEEEcCHhhcCCCCCc
Confidence 9999999999987777888899999999999999999999999999998765 6899999999999998899
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC----hHHHHHHHhhhccCCCCCCHHHHHHHHHH
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA----PEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 242 (298)
..|++||++++.++++++.|++ ++||+||+|+||+++|++...... .++....+....|.+++.+|+|+|+++.|
T Consensus 169 ~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~ 247 (273)
T 1ae1_A 169 SLYSASKGAINQMTKSLACEWA-KDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAF 247 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 9999999999999999999998 789999999999999987543222 23344455566788999999999999999
Q ss_pred hcCCCCCCccccEEEeCCCCCCC
Q 022386 243 LASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 243 L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
|+++.+.+++|+.|.+|||..+.
T Consensus 248 l~s~~~~~~tG~~i~vdGG~~~~ 270 (273)
T 1ae1_A 248 LCFPAASYITGQIIWADGGFTAN 270 (273)
T ss_dssp HHSGGGTTCCSCEEEESTTGGGC
T ss_pred HhCccccCcCCCEEEECCCcccC
Confidence 99998999999999999997753
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-47 Score=335.75 Aligned_cols=252 Identities=23% Similarity=0.249 Sum_probs=222.6
Q ss_pred CCCCCCCCcEEEEecCCc--hhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES 82 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~--giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~ 82 (298)
..+++|+||++|||||++ |||+++|++|+++|++|++++|+.+..+...+...+. +.+.+++||++|++++++++++
T Consensus 23 ~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~ 101 (296)
T 3k31_A 23 RTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL-GVKLTVPCDVSDAESVDNMFKV 101 (296)
T ss_dssp CCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH-TCCEEEECCTTCHHHHHHHHHH
T ss_pred cchhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc-CCeEEEEcCCCCHHHHHHHHHH
Confidence 345678999999999997 9999999999999999999999976555544444433 3478899999999999999999
Q ss_pred HHHHhCCccEEEECCCCCCC----CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccc
Q 022386 83 TINHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (298)
Q Consensus 83 ~~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~ 158 (298)
+.++|+++|+||||||+... .++.+.+.++|++.+++|+.++++++++++|+|++ +|+||++||..
T Consensus 102 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~----------~g~IV~isS~~ 171 (296)
T 3k31_A 102 LAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN----------GGSILTLSYYG 171 (296)
T ss_dssp HHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT----------CEEEEEEECGG
T ss_pred HHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc----------CCEEEEEEehh
Confidence 99999999999999998754 67788899999999999999999999999999865 48999999999
Q ss_pred cccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHH
Q 022386 159 HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 238 (298)
Q Consensus 159 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 238 (298)
+..+.+....|++||+|++.|+++++.|++ ++||+||+|+||+++|++.......++.........|.+++.+|+|+|+
T Consensus 172 ~~~~~~~~~~Y~asKaal~~l~~~la~e~~-~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~ 250 (296)
T 3k31_A 172 AEKVVPHYNVMGVCKAALEASVKYLAVDLG-KQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLDDVGG 250 (296)
T ss_dssp GTSCCTTTTHHHHHHHHHHHHHHHHHHHHH-TTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTSSCCCHHHHHH
T ss_pred hccCCCCchhhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCCCCCCCHHHHHH
Confidence 999999999999999999999999999998 8899999999999999875543333455566777889999999999999
Q ss_pred HHHHhcCCCCCCccccEEEeCCCCCCCCCC
Q 022386 239 AALYLASDAGKYVNGNTLIVDGGNWLSNPR 268 (298)
Q Consensus 239 ~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~ 268 (298)
+++||+++.++++||++|.+|||.++....
T Consensus 251 ~v~fL~s~~a~~itG~~i~vdGG~~~~~~~ 280 (296)
T 3k31_A 251 AALYLLSDLGRGTTGETVHVDCGYHVVGMK 280 (296)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTGGGCSSC
T ss_pred HHHHHcCCccCCccCCEEEECCCccccCCc
Confidence 999999999999999999999999886544
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-47 Score=335.88 Aligned_cols=251 Identities=27% Similarity=0.424 Sum_probs=219.3
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCC------------hhHHHHHHHHHHhCCCCeEEEEccCCCH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR------------KTVLRSAVAALHSLGIPAIGLEGDVRKR 73 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 73 (298)
.|.+|+||++|||||++|||+++|+.|+++|++|++++++ .+.+++..+.+...+.++.++.||++|+
T Consensus 40 ~m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~ 119 (317)
T 3oec_A 40 RMNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDL 119 (317)
T ss_dssp --CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred hhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCH
Confidence 4568999999999999999999999999999999999876 6677777788888888999999999999
Q ss_pred HHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEE
Q 022386 74 EDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIIN 153 (298)
Q Consensus 74 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~ 153 (298)
++++++++++.+.++++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++. +|+||+
T Consensus 120 ~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~-------~g~Iv~ 192 (317)
T 3oec_A 120 ASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQ-------GGSVIF 192 (317)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCS-------CEEEEE
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC-------CCEEEE
Confidence 9999999999999999999999999988888889999999999999999999999999999987632 589999
Q ss_pred ecccccccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc------------CChHHHHHHH
Q 022386 154 ISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK------------LAPEEIRSKA 221 (298)
Q Consensus 154 vss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~------------~~~~~~~~~~ 221 (298)
+||..+..+.+....|++||+|++.|+++++.|++ ++||+||+|+||+++|++.... ...++..+.+
T Consensus 193 isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (317)
T 3oec_A 193 VSSTVGLRGAPGQSHYAASKHGVQGLMLSLANEVG-RHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELF 271 (317)
T ss_dssp ECCGGGSSCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHH
T ss_pred ECcHHhcCCCCCCcchHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHH
Confidence 99999999999999999999999999999999998 7899999999999998764211 1111112211
Q ss_pred --hhhccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 222 --TDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 222 --~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
....+ .++.+|+|+|++++||+++.++++||++|.+|||..+.
T Consensus 272 ~~~~~~p-~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~~~ 316 (317)
T 3oec_A 272 SQLTLLP-IPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLAR 316 (317)
T ss_dssp TTTCSSS-SSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred hhhccCC-CCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchhhc
Confidence 12223 67889999999999999999999999999999998763
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-48 Score=339.77 Aligned_cols=249 Identities=29% Similarity=0.368 Sum_probs=222.3
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh--hHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK--TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES 82 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~ 82 (298)
+.+.+|+||++|||||++|||+++|++|+++|++|++++|+. ...+++.+.+...+.++.++.||++|++++++++++
T Consensus 42 ~~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 121 (294)
T 3r3s_A 42 VGSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHK 121 (294)
T ss_dssp CCCSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHH
T ss_pred ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHH
Confidence 445678999999999999999999999999999999999873 356667777777788899999999999999999999
Q ss_pred HHHHhCCccEEEECCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc
Q 022386 83 TINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 161 (298)
Q Consensus 83 ~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~ 161 (298)
+.+.++++|++|||||... ..++.+.+.++|++.+++|+.++++++++++|+|++ +|+||++||..+..
T Consensus 122 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~----------~g~Iv~isS~~~~~ 191 (294)
T 3r3s_A 122 AREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK----------GASIITTSSIQAYQ 191 (294)
T ss_dssp HHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT----------TCEEEEECCGGGTS
T ss_pred HHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc----------CCEEEEECChhhcc
Confidence 9999999999999999754 467788899999999999999999999999999854 48899999999999
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHH
Q 022386 162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241 (298)
Q Consensus 162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~ 241 (298)
+.+....|++||+|++.|+++++.|++ ++||+||+|+||+|+|++.......++....+....+.+++.+|+|+|++++
T Consensus 192 ~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~ 270 (294)
T 3r3s_A 192 PSPHLLDYAATKAAILNYSRGLAKQVA-EKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYV 270 (294)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCSHHHHTTTSCGGGSTTTTTTSTTSSCBCGGGGHHHHH
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCcCccccccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 999999999999999999999999998 7899999999999999864333333344455666788999999999999999
Q ss_pred HhcCCCCCCccccEEEeCCCCCC
Q 022386 242 YLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 242 ~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
||+++.++++||++|.+|||.++
T Consensus 271 ~L~s~~~~~itG~~i~vdGG~~l 293 (294)
T 3r3s_A 271 YLASQESSYVTAEVHGVCGGEHL 293 (294)
T ss_dssp HHHSGGGTTCCSCEEEESTTCCC
T ss_pred HHhCccccCCCCCEEEECCCccC
Confidence 99999999999999999999876
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-47 Score=333.07 Aligned_cols=249 Identities=23% Similarity=0.224 Sum_probs=216.7
Q ss_pred CCCCCCCcEEEEecCC--chhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHH
Q 022386 6 KGDILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t--~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
.+.+|+||++|||||+ +|||+++|++|+++|++|++++|+....+ ..+++.+..+++.++.||++|+++++++++++
T Consensus 25 ~~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 103 (293)
T 3grk_A 25 QSGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKK-RVEPLAEELGAFVAGHCDVADAASIDAVFETL 103 (293)
T ss_dssp --CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHH-HHHHHHHHHTCEEEEECCTTCHHHHHHHHHHH
T ss_pred ccccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHHHHHHhcCCceEEECCCCCHHHHHHHHHHH
Confidence 4557999999999999 55999999999999999999999954333 33444333356889999999999999999999
Q ss_pred HHHhCCccEEEECCCCCC----CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 84 INHFGKLDILVNAAAGNF----LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
.+.|+++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|+|++ +|+||++||..+
T Consensus 104 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~----------~g~Iv~isS~~~ 173 (293)
T 3grk_A 104 EKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD----------GGSILTLTYYGA 173 (293)
T ss_dssp HHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT----------CEEEEEEECGGG
T ss_pred HHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC----------CCEEEEEeehhh
Confidence 999999999999999875 567788899999999999999999999999999975 489999999999
Q ss_pred ccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHH
Q 022386 160 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239 (298)
Q Consensus 160 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (298)
..+.+....|++||+|++.|+++++.|++ ++||+||+|+||+++|++.......++.........+.+++.+|+|+|++
T Consensus 174 ~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~ 252 (293)
T 3grk_A 174 EKVMPNYNVMGVAKAALEASVKYLAVDLG-PQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIDEVGDV 252 (293)
T ss_dssp TSBCTTTTHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTTSSCCCHHHHHHH
T ss_pred ccCCCchHHHHHHHHHHHHHHHHHHHHHh-HhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence 99999999999999999999999999998 88999999999999998765554446666777788899999999999999
Q ss_pred HHHhcCCCCCCccccEEEeCCCCCCCC
Q 022386 240 ALYLASDAGKYVNGNTLIVDGGNWLSN 266 (298)
Q Consensus 240 ~~~L~s~~~~~~~G~~i~~dgG~~~~~ 266 (298)
++||+++.++++||+.|.+|||.++..
T Consensus 253 v~~L~s~~~~~itG~~i~vdGG~~~~~ 279 (293)
T 3grk_A 253 GLYFLSDLSRSVTGEVHHADSGYHVIG 279 (293)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred HHHHcCccccCCcceEEEECCCcccCC
Confidence 999999999999999999999998854
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-48 Score=334.79 Aligned_cols=245 Identities=24% Similarity=0.305 Sum_probs=221.8
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
.+|+||+++||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.+.++.++.||++|+++++++++.+.+.
T Consensus 29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~- 107 (275)
T 4imr_A 29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI- 107 (275)
T ss_dssp HCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH-
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh-
Confidence 4789999999999999999999999999999999999999889999999888889999999999999999999999887
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
+++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|++++ .|+||++||..+..+.+...
T Consensus 108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~--------~g~Iv~isS~~~~~~~~~~~ 179 (275)
T 4imr_A 108 APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARK--------WGRVVSIGSINQLRPKSVVT 179 (275)
T ss_dssp SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCTTBH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--------CcEEEEECCHHhCCCCCCch
Confidence 9999999999988778888899999999999999999999999999998876 69999999999998888888
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC-hHHHHHHHhhhc-cCCCCCCHHHHHHHHHHhcC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYM-AAYKFGEKWDIAMAALYLAS 245 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~dva~~~~~L~s 245 (298)
.|++||+|++.|+++++.|++ ++||+||+|+||+++|++...... .++......... +.+++.+|+|+|++++||++
T Consensus 180 ~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s 258 (275)
T 4imr_A 180 AYAATKAAQHNLIQSQARDFA-GDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVGAALFLAS 258 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHS
T ss_pred hhHHHHHHHHHHHHHHHHHhc-ccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCccCCCcCHHHHHHHHHHHcC
Confidence 999999999999999999998 789999999999999886433211 123333444444 89999999999999999999
Q ss_pred CCCCCccccEEEeCCCC
Q 022386 246 DAGKYVNGNTLIVDGGN 262 (298)
Q Consensus 246 ~~~~~~~G~~i~~dgG~ 262 (298)
+.++++||+.|.+|||+
T Consensus 259 ~~a~~itG~~i~vdGG~ 275 (275)
T 4imr_A 259 EACSFMTGETIFLTGGY 275 (275)
T ss_dssp GGGTTCCSCEEEESSCC
T ss_pred cccCCCCCCEEEeCCCC
Confidence 99999999999999994
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-47 Score=328.23 Aligned_cols=245 Identities=26% Similarity=0.438 Sum_probs=221.3
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
.+|++|+++||||++|||++++++|+++|++|++++|+.+.++++.+++.+.+.++.++.||++|+++++++++++.+.+
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (262)
T 1zem_A 3 KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF 82 (262)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 46889999999999999999999999999999999999988888888887777789999999999999999999999999
Q ss_pred CCccEEEECCCCC-CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 88 GKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 88 ~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
+++|++|||||.. ...++.+.+.++|++.+++|+.++++++++++|+|.+++ .|+||++||..+..+.+..
T Consensus 83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~ 154 (262)
T 1zem_A 83 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN--------YGRIVNTASMAGVKGPPNM 154 (262)
T ss_dssp SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCHHHHSCCTTB
T ss_pred CCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--------CcEEEEEcchhhccCCCCC
Confidence 9999999999986 667778889999999999999999999999999998765 6899999999999888889
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc------------CC-hHH-HHHHHhhhccCCCCCC
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK------------LA-PEE-IRSKATDYMAAYKFGE 232 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~------------~~-~~~-~~~~~~~~~~~~~~~~ 232 (298)
..|++||+++..|+++++.|++ ++||+||+|+||+++|++.... .. .++ ..+.+....|.+++.+
T Consensus 155 ~~Y~asK~a~~~~~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~ 233 (262)
T 1zem_A 155 AAYGTSKGAIIALTETAALDLA-PYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGD 233 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBC
T ss_pred chHHHHHHHHHHHHHHHHHHHH-hhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCCCCcC
Confidence 9999999999999999999998 7899999999999999864321 11 233 3444556678899999
Q ss_pred HHHHHHHHHHhcCCCCCCccccEEEeCCC
Q 022386 233 KWDIAMAALYLASDAGKYVNGNTLIVDGG 261 (298)
Q Consensus 233 ~~dva~~~~~L~s~~~~~~~G~~i~~dgG 261 (298)
|+|+|+.++||+++.++++||+.|.+|||
T Consensus 234 p~dvA~~v~~l~s~~~~~itG~~i~vdGG 262 (262)
T 1zem_A 234 INEIPGVVAFLLGDDSSFMTGVNLPIAGG 262 (262)
T ss_dssp GGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred HHHHHHHHHHHcCchhcCcCCcEEecCCC
Confidence 99999999999999999999999999998
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-47 Score=324.89 Aligned_cols=248 Identities=31% Similarity=0.454 Sum_probs=222.3
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh-
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF- 87 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~- 87 (298)
+|+||+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.||++|+++++++++++.+.+
T Consensus 6 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (260)
T 2ae2_A 6 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFH 85 (260)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 5789999999999999999999999999999999999988888888887777789999999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
+++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|++++ .|+||++||..+..+.+...
T Consensus 86 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~ 157 (260)
T 2ae2_A 86 GKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE--------RGNVVFISSVSGALAVPYEA 157 (260)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS--------SEEEEEECCGGGTSCCTTCH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--------CcEEEEEcchhhccCCCCcc
Confidence 8999999999987777778889999999999999999999999999998765 68999999999998888899
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHH---HHhhhccCCCCCCHHHHHHHHHHhc
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS---KATDYMAAYKFGEKWDIAMAALYLA 244 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~dva~~~~~L~ 244 (298)
.|++||++++.++++++.|++ ++||+||+|+||+++|++.......++..+ .+....+.+++.+|+|+|+.++||+
T Consensus 158 ~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~ 236 (260)
T 2ae2_A 158 VYGATKGAMDQLTRCLAFEWA-KDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLC 236 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHh-hcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence 999999999999999999998 789999999999999886433222222222 4455678889999999999999999
Q ss_pred CCCCCCccccEEEeCCCCCCC
Q 022386 245 SDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 245 s~~~~~~~G~~i~~dgG~~~~ 265 (298)
++.+.+++|+.+.+|||..+.
T Consensus 237 s~~~~~~tG~~~~vdgG~~~~ 257 (260)
T 2ae2_A 237 FPAASYVTGQIIYVDGGLMAN 257 (260)
T ss_dssp SGGGTTCCSCEEEESTTGGGC
T ss_pred CccccCCCCCEEEECCCcccc
Confidence 998899999999999997653
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-47 Score=322.84 Aligned_cols=244 Identities=35% Similarity=0.480 Sum_probs=220.2
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcC-ChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
+|+||+++||||++|||++++++|+++|++|++++| +.+.+++..+++...+.++.++.||++|+++++++++++.+.+
T Consensus 1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (246)
T 2uvd_A 1 MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVF 80 (246)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 478999999999999999999999999999999999 7777888888887777789999999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
+++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+..+.+...
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~ 152 (246)
T 2uvd_A 81 GQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQR--------HGRIVNIASVVGVTGNPGQA 152 (246)
T ss_dssp SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCTHHHHCCTTBH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--------CcEEEEECCHHhcCCCCCCc
Confidence 9999999999987777788889999999999999999999999999998765 68999999999988888899
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~ 247 (298)
.|++||+++..++++++.|++ ++||+||+|+||+++|++.... . ++.........|.+++.+|+|+|+.++||+++.
T Consensus 153 ~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~-~-~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~ 229 (246)
T 2uvd_A 153 NYVAAKAGVIGLTKTSAKELA-SRNITVNAIAPGFIATDMTDVL-D-ENIKAEMLKLIPAAQFGEAQDIANAVTFFASDQ 229 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBGGGCSSCC-C-TTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred hHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEeccccCcchhhc-C-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCch
Confidence 999999999999999999998 7899999999999998865432 2 233344455678889999999999999999998
Q ss_pred CCCccccEEEeCCCCC
Q 022386 248 GKYVNGNTLIVDGGNW 263 (298)
Q Consensus 248 ~~~~~G~~i~~dgG~~ 263 (298)
+.+++|+.|.+|||.+
T Consensus 230 ~~~~tG~~~~vdgG~~ 245 (246)
T 2uvd_A 230 SKYITGQTLNVDGGMV 245 (246)
T ss_dssp GTTCCSCEEEESTTSC
T ss_pred hcCCCCCEEEECcCcc
Confidence 8999999999999965
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-48 Score=334.28 Aligned_cols=248 Identities=23% Similarity=0.308 Sum_probs=211.0
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCC---hhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR---KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES 82 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~---~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~ 82 (298)
++.+|+||++|||||++|||+++|++|+++|++|++++|+ .+.++++.+++.+.+.++.+++||++|++++++++++
T Consensus 5 ~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 84 (262)
T 3ksu_A 5 KYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDF 84 (262)
T ss_dssp CCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHH
T ss_pred cccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence 4568999999999999999999999999999999998764 4567777888887788899999999999999999999
Q ss_pred HHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC
Q 022386 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (298)
Q Consensus 83 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~ 162 (298)
+.+.++++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|++ .|+||++||..+..+
T Consensus 85 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~----------~g~iv~isS~~~~~~ 154 (262)
T 3ksu_A 85 AEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNP----------NGHIITIATSLLAAY 154 (262)
T ss_dssp HHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEE----------EEEEEEECCCHHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC----------CCEEEEEechhhccC
Confidence 9999999999999999888888888999999999999999999999999999943 589999999999888
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHH
Q 022386 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (298)
Q Consensus 163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 242 (298)
.+....|++||+|+..|+++++.|++ ++||+||+|+||+++|++..... .++.........+.+++.+|+|+|++++|
T Consensus 155 ~~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~~~r~~~pedvA~~v~~ 232 (262)
T 3ksu_A 155 TGFYSTYAGNKAPVEHYTRAASKELM-KQQISVNAIAPGPMDTSFFYGQE-TKESTAFHKSQAMGNQLTKIEDIAPIIKF 232 (262)
T ss_dssp HCCCCC-----CHHHHHHHHHHHHTT-TTTCEEEEEEECCCCTHHHHTCC-------------CCCCSCCGGGTHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHH-HcCcEEEEEeeCCCcCccccccC-chHHHHHHHhcCcccCCCCHHHHHHHHHH
Confidence 88889999999999999999999998 88999999999999998654432 33344555667788999999999999999
Q ss_pred hcCCCCCCccccEEEeCCCCCCCC
Q 022386 243 LASDAGKYVNGNTLIVDGGNWLSN 266 (298)
Q Consensus 243 L~s~~~~~~~G~~i~~dgG~~~~~ 266 (298)
|+++ +.++||+.|.+|||.....
T Consensus 233 L~s~-~~~itG~~i~vdGg~~~~~ 255 (262)
T 3ksu_A 233 LTTD-GWWINGQTIFANGGYTTRE 255 (262)
T ss_dssp HHTT-TTTCCSCEEEESTTCCCC-
T ss_pred HcCC-CCCccCCEEEECCCccCCC
Confidence 9999 8999999999999988754
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-47 Score=324.44 Aligned_cols=252 Identities=27% Similarity=0.387 Sum_probs=222.9
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
.....|++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.||++|+++++++++++.
T Consensus 7 ~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 86 (260)
T 2zat_A 7 ERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAV 86 (260)
T ss_dssp ---CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHH
Confidence 34567899999999999999999999999999999999999988888888887777789999999999999999999999
Q ss_pred HHhCCccEEEECCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 85 NHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
+.++++|++|||||... ..++.+.+.++|++.+++|+.++++++++++|+|++++ .|+||++||..++.+.
T Consensus 87 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~ 158 (260)
T 2zat_A 87 NLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRG--------GGSVLIVSSVGAYHPF 158 (260)
T ss_dssp HHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--------CEEEEEECCGGGTSCC
T ss_pred HHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--------CCEEEEEechhhcCCC
Confidence 99999999999999754 46677889999999999999999999999999998765 6899999999999988
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHh
Q 022386 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (298)
Q Consensus 164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L 243 (298)
+....|++||++++.|+++++.|++ ++||+||+|+||+++|++.......++.........+.+++.+|+|+|+++.||
T Consensus 159 ~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l 237 (260)
T 2zat_A 159 PNLGPYNVSKTALLGLTKNLAVELA-PRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFL 237 (260)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHHTCSSCBCGGGGHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEECcccCccchhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 8999999999999999999999998 789999999999999986433222233334455567888999999999999999
Q ss_pred cCCCCCCccccEEEeCCCCCCC
Q 022386 244 ASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 244 ~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
+++.+.+++|+.|.+|||...+
T Consensus 238 ~s~~~~~~tG~~~~vdgG~~~s 259 (260)
T 2zat_A 238 CSEDASYITGETVVVGGGTASR 259 (260)
T ss_dssp TSGGGTTCCSCEEEESTTCCCC
T ss_pred cCcccCCccCCEEEECCCcccc
Confidence 9998899999999999997654
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-46 Score=323.82 Aligned_cols=250 Identities=26% Similarity=0.381 Sum_probs=217.6
Q ss_pred CCCCCCCCcEEEEecCC-chhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCC-CCeEEEEccCCCHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGG-SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVES 82 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t-~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dls~~~~~~~~~~~ 82 (298)
..+.+|+||++|||||+ +|||+++|++|+++|++|++++|+.+.+++..+++.+.+ .++.++.||++|++++++++++
T Consensus 15 ~~~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~ 94 (266)
T 3o38_A 15 DGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQ 94 (266)
T ss_dssp CCCSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHH
T ss_pred ccccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHH
Confidence 34567999999999998 599999999999999999999999999999888887654 6799999999999999999999
Q ss_pred HHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC
Q 022386 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (298)
Q Consensus 83 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~ 162 (298)
+.+.++++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|++++. .++||++||..+..+
T Consensus 95 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~ 167 (266)
T 3o38_A 95 TVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDH-------GGVIVNNASVLGWRA 167 (266)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSC-------CEEEEEECCGGGTCC
T ss_pred HHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-------CeEEEEeCCHHHcCC
Confidence 9999999999999999887788888999999999999999999999999999987621 689999999999999
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHH
Q 022386 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (298)
Q Consensus 163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 242 (298)
.+....|++||+|++.|+++++.|++ ++||+||+|+||+++|++.... ..++.........+.+++.+|+|+|+.++|
T Consensus 168 ~~~~~~Y~~sKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~r~~~~~dva~~i~~ 245 (266)
T 3o38_A 168 QHSQSHYAAAKAGVMALTRCSAIEAV-EFGVRINAVSPSIARHKFLEKT-SSSELLDRLASDEAFGRAAEPWEVAATIAF 245 (266)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCCCC------------------CCTTSSCCCHHHHHHHHHH
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHH-HcCcEEEEEeCCcccchhhhcc-CcHHHHHHHHhcCCcCCCCCHHHHHHHHHH
Confidence 99999999999999999999999998 7899999999999998865443 234455566677788999999999999999
Q ss_pred hcCCCCCCccccEEEeCCCCC
Q 022386 243 LASDAGKYVNGNTLIVDGGNW 263 (298)
Q Consensus 243 L~s~~~~~~~G~~i~~dgG~~ 263 (298)
|+++.+.++||++|.+|||++
T Consensus 246 l~s~~~~~~tG~~i~vdgG~~ 266 (266)
T 3o38_A 246 LASDYSSYMTGEVVSVSSQRA 266 (266)
T ss_dssp HHSGGGTTCCSCEEEESSCCC
T ss_pred HcCccccCccCCEEEEcCCcC
Confidence 999999999999999999974
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-47 Score=325.60 Aligned_cols=250 Identities=34% Similarity=0.504 Sum_probs=221.3
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHH-HhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-HSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~-~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
...+|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++ ...+.++.++.||++++++++++++++.
T Consensus 15 ~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 94 (267)
T 1vl8_A 15 EVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVK 94 (267)
T ss_dssp --CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 345789999999999999999999999999999999999988888887777 4456788999999999999999999999
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccc-cccCC
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL-HYTAT 163 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~-~~~~~ 163 (298)
+.++++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|++++ .|+||++||.. +..+.
T Consensus 95 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~--------~g~iv~isS~~~~~~~~ 166 (267)
T 1vl8_A 95 EKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD--------NPSIINIGSLTVEEVTM 166 (267)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS--------SCEEEEECCGGGTCCCS
T ss_pred HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--------CcEEEEECCcchhccCC
Confidence 9999999999999987777788889999999999999999999999999998765 68999999998 88888
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHh
Q 022386 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (298)
Q Consensus 164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L 243 (298)
+....|++||++++.|+++++.|++ ++||+||+|+||+++|++.......++....+....+.+++.+|+|+|+.++||
T Consensus 167 ~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l 245 (267)
T 1vl8_A 167 PNISAYAASKGGVASLTKALAKEWG-RYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFL 245 (267)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHH
T ss_pred CCChhHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEeccCccccccccccChHHHHHHHhhCCCCCCcCHHHHHHHHHHH
Confidence 8899999999999999999999998 789999999999999986433211233344455567888999999999999999
Q ss_pred cCCCCCCccccEEEeCCCCCC
Q 022386 244 ASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 244 ~s~~~~~~~G~~i~~dgG~~~ 264 (298)
+++.+.+++|+.|.+|||..+
T Consensus 246 ~s~~~~~itG~~i~vdGG~~~ 266 (267)
T 1vl8_A 246 ASEEAKYVTGQIIFVDGGWTA 266 (267)
T ss_dssp HSGGGTTCCSCEEEESTTGGG
T ss_pred cCccccCCcCCeEEECCCCCC
Confidence 999889999999999999653
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-47 Score=327.53 Aligned_cols=246 Identities=26% Similarity=0.284 Sum_probs=215.7
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC--CCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
.++|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++... +..+.++.+|++++++++++++
T Consensus 5 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~--- 81 (267)
T 3t4x_A 5 HMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE--- 81 (267)
T ss_dssp CCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH---
T ss_pred ccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH---
Confidence 45789999999999999999999999999999999999999888888888765 3567889999999999887764
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~ 164 (298)
+++++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|++++ .|+||++||..+..+.+
T Consensus 82 -~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~ 152 (267)
T 3t4x_A 82 -KYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERK--------EGRVIFIASEAAIMPSQ 152 (267)
T ss_dssp -HCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--------EEEEEEECCGGGTSCCT
T ss_pred -hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--------CCEEEEEcchhhccCCC
Confidence 579999999999998888888899999999999999999999999999998875 68999999999999999
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc---------CChHHHHHHH----hhhccCCCCC
Q 022386 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK---------LAPEEIRSKA----TDYMAAYKFG 231 (298)
Q Consensus 165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~---------~~~~~~~~~~----~~~~~~~~~~ 231 (298)
....|++||+|++.|+++++.|++ ++|||||+|+||+++|++.... ...++..... ....+.+++.
T Consensus 153 ~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 231 (267)
T 3t4x_A 153 EMAHYSATKTMQLSLSRSLAELTT-GTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLI 231 (267)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTT-TSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCB
T ss_pred cchHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCcc
Confidence 999999999999999999999998 8899999999999998743221 1122222222 2234679999
Q ss_pred CHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 232 EKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 232 ~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
+|+|+|++++||+++.++++||++|.+|||...+
T Consensus 232 ~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~s 265 (267)
T 3t4x_A 232 RPEEIAHLVTFLSSPLSSAINGSALRIDGGLVRS 265 (267)
T ss_dssp CTHHHHHHHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred CHHHHHHHHHHHcCccccCccCCeEEECCCcccc
Confidence 9999999999999999999999999999997764
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-46 Score=322.85 Aligned_cols=249 Identities=27% Similarity=0.363 Sum_probs=221.5
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC-CCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.+|++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++... +.++.++.||++|+++++++++++.+.
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (263)
T 3ai3_A 3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSS 82 (263)
T ss_dssp CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3588999999999999999999999999999999999988888887777665 678999999999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
++++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+..+.+..
T Consensus 83 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~ 154 (263)
T 3ai3_A 83 FGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARG--------GGAIIHNASICAVQPLWYE 154 (263)
T ss_dssp HSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCTTC
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--------CcEEEEECchhhcCCCCCc
Confidence 99999999999987777888899999999999999999999999999998765 6899999999999888889
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC---------hHHHHHHHhhh-ccCCCCCCHHHH
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---------PEEIRSKATDY-MAAYKFGEKWDI 236 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~---------~~~~~~~~~~~-~~~~~~~~~~dv 236 (298)
..|++||++++.++++++.|++ ++||+||+|+||+++|++...... .++....+... .|.+++.+|+|+
T Consensus 155 ~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dv 233 (263)
T 3ai3_A 155 PIYNVTKAALMMFSKTLATEVI-KDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEEL 233 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBCHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCcCHHHH
Confidence 9999999999999999999998 789999999999999875432110 22333334444 788899999999
Q ss_pred HHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 237 AMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 237 a~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
|++++||+++.+.+++|+.+.+|||..++
T Consensus 234 A~~~~~l~s~~~~~~~G~~~~vdgG~~~s 262 (263)
T 3ai3_A 234 ANFFVFLCSERATYSVGSAYFVDGGMLKT 262 (263)
T ss_dssp HHHHHHHTSTTCTTCCSCEEEESTTCCCC
T ss_pred HHHHHHHcCccccCCCCcEEEECCCcccc
Confidence 99999999998899999999999997653
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-46 Score=323.63 Aligned_cols=247 Identities=30% Similarity=0.402 Sum_probs=214.1
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhH-HHHHHHHHHhC-CCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-LRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~-~~~~~~~~~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
+|++|+++||||++|||++++++|+++|++|++++|+.+. ++++.+++.+. +.++.++.+|++|+++++++++++.+.
T Consensus 1 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 80 (260)
T 1x1t_A 1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ 80 (260)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence 3789999999999999999999999999999999999877 77777777654 667899999999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
++++|++|||||.....++.+.+.++|++.+++|+.++++++++++|+|++++ .|+||++||..+..+.+..
T Consensus 81 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~ 152 (260)
T 1x1t_A 81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG--------FGRIINIASAHGLVASANK 152 (260)
T ss_dssp HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCTTC
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------CCEEEEECcHHhCcCCCCC
Confidence 99999999999987777778889999999999999999999999999998765 6899999999999888889
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC---------hHHHHHHH-hhhccCCCCCCHHHH
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---------PEEIRSKA-TDYMAAYKFGEKWDI 236 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~---------~~~~~~~~-~~~~~~~~~~~~~dv 236 (298)
..|++||++++.|+++++.|++ ++||+||+|+||+++|++...... .++....+ ....|.+++.+|+|+
T Consensus 153 ~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dv 231 (260)
T 1x1t_A 153 SAYVAAKHGVVGFTKVTALETA-GQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQL 231 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhc-cCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHHHH
Confidence 9999999999999999999998 889999999999999986543211 01222233 445688899999999
Q ss_pred HHHHHHhcCCCCCCccccEEEeCCCCCC
Q 022386 237 AMAALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 237 a~~~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
|+.++||+++.+.+++|+.+.+|||..+
T Consensus 232 a~~~~~l~s~~~~~~tG~~~~vdgG~~~ 259 (260)
T 1x1t_A 232 GGTAVFLASDAAAQITGTTVSVDGGWTA 259 (260)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHHHHHhChhhcCCCCCEEEECCCccC
Confidence 9999999999889999999999999754
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-46 Score=324.04 Aligned_cols=249 Identities=28% Similarity=0.429 Sum_probs=220.1
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC--CCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
.+|++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.+. +.++.++.||++|+++++++++++.+
T Consensus 9 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 88 (267)
T 1iy8_A 9 TRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE 88 (267)
T ss_dssp -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999999998888888877665 66799999999999999999999999
Q ss_pred HhCCccEEEECCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC
Q 022386 86 HFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~ 164 (298)
.++++|++|||||+... .++.+.+.++|++.+++|+.+++++++.++|.|++++ .|+||++||..+..+.+
T Consensus 89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~ 160 (267)
T 1iy8_A 89 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG--------SGMVVNTASVGGIRGIG 160 (267)
T ss_dssp HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CCEEEEECCGGGTSBCS
T ss_pred HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--------CCEEEEEcchhhccCCC
Confidence 99999999999998765 6777889999999999999999999999999998765 68999999999998888
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc----C--ChHHHHHHHhhhccCCCCCCHHHHHH
Q 022386 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK----L--APEEIRSKATDYMAAYKFGEKWDIAM 238 (298)
Q Consensus 165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~dva~ 238 (298)
....|++||++++.++++++.|++ ++||+||+|+||+++|++.... . ..+...+.+....|.+++.+|+|+|+
T Consensus 161 ~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~ 239 (267)
T 1iy8_A 161 NQSGYAAAKHGVVGLTRNSAVEYG-RYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAA 239 (267)
T ss_dssp SBHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHH-hcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCCCCCcCHHHHHH
Confidence 999999999999999999999998 7899999999999998864321 0 11111124445568889999999999
Q ss_pred HHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 239 AALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 239 ~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
.++||+++.+.+++|+.|.+|||..+.
T Consensus 240 ~v~~l~s~~~~~~tG~~i~vdGG~~~~ 266 (267)
T 1iy8_A 240 VVAFLLSDDASYVNATVVPIDGGQSAA 266 (267)
T ss_dssp HHHHHTSGGGTTCCSCEEEESTTTTTB
T ss_pred HHHHHcCccccCCCCCEEEECCCcccC
Confidence 999999998899999999999997653
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-46 Score=321.19 Aligned_cols=245 Identities=22% Similarity=0.306 Sum_probs=215.7
Q ss_pred CCCCCCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCC-CCeEEEEccC--CCHHHHH
Q 022386 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDV--RKREDAV 77 (298)
Q Consensus 1 ~~~~~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl--s~~~~~~ 77 (298)
|...+....|+||+++||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.+ .++.++.+|+ +++++++
T Consensus 1 M~~~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 80 (252)
T 3f1l_A 1 MHYQPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQ 80 (252)
T ss_dssp CCCCCCTTTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHH
T ss_pred CCcCCcccccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHH
Confidence 455556678999999999999999999999999999999999999999888888887654 3788999999 9999999
Q ss_pred HHHHHHHHHhCCccEEEECCCCC-CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecc
Q 022386 78 RVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISA 156 (298)
Q Consensus 78 ~~~~~~~~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss 156 (298)
++++++.+.++++|++|||||+. ...++.+.+.++|++.+++|+.++++++++++|+|++++ .|+||++||
T Consensus 81 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~--------~g~iv~isS 152 (252)
T 3f1l_A 81 QLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSD--------AGSLVFTSS 152 (252)
T ss_dssp HHHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS--------SCEEEEECC
T ss_pred HHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCC--------CCEEEEECC
Confidence 99999999999999999999985 456888899999999999999999999999999998865 689999999
Q ss_pred cccccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHH
Q 022386 157 TLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236 (298)
Q Consensus 157 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv 236 (298)
..+..+.+....|++||+|++.|+++++.|++ +. ||||+|+||+++|++..... ...+..++.+|+|+
T Consensus 153 ~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~-~~-irvn~v~PG~v~t~~~~~~~----------~~~~~~~~~~p~dv 220 (252)
T 3f1l_A 153 SVGRQGRANWGAYAASKFATEGMMQVLADEYQ-QR-LRVNCINPGGTRTAMRASAF----------PTEDPQKLKTPADI 220 (252)
T ss_dssp GGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTT-TT-CEEEEEECCSBSSHHHHHHC----------TTCCGGGSBCTGGG
T ss_pred hhhccCCCCCchhHHHHHHHHHHHHHHHHHhc-CC-cEEEEEecCcccCchhhhhC----------CccchhccCCHHHH
Confidence 99999999999999999999999999999997 65 99999999999987532211 11223457899999
Q ss_pred HHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 237 AMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 237 a~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
++.++||+++.++++||+.|.+|||+...
T Consensus 221 a~~~~~L~s~~~~~itG~~i~vdgG~~~~ 249 (252)
T 3f1l_A 221 MPLYLWLMGDDSRRKTGMTFDAQPGRKPG 249 (252)
T ss_dssp HHHHHHHHSGGGTTCCSCEEESSCC----
T ss_pred HHHHHHHcCccccCCCCCEEEeCCCcCCC
Confidence 99999999999999999999999997653
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-47 Score=327.11 Aligned_cols=246 Identities=27% Similarity=0.367 Sum_probs=211.9
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCC------------hhHHHHHHHHHHhCCCCeEEEEccCCCH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR------------KTVLRSAVAALHSLGIPAIGLEGDVRKR 73 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 73 (298)
.+.+|+||++|||||++|||+++|++|+++|++|++++|+ .+.+++..+.+...+.++.+++||++|+
T Consensus 7 ~~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 86 (278)
T 3sx2_A 7 SEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDR 86 (278)
T ss_dssp --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCH
T ss_pred CCCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCH
Confidence 3567999999999999999999999999999999999987 6677777788877788999999999999
Q ss_pred HHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEE
Q 022386 74 EDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIIN 153 (298)
Q Consensus 74 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~ 153 (298)
++++++++++.+.++++|+||||||+..... +.++|++.+++|+.++++++++++|+|.+++. +|+||+
T Consensus 87 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-------~g~iv~ 155 (278)
T 3sx2_A 87 ESLSAALQAGLDELGRLDIVVANAGIAPMSA----GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGT-------GGSIVL 155 (278)
T ss_dssp HHHHHHHHHHHHHHCCCCEEEECCCCCCCSS----THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCS-------CEEEEE
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCC----CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC-------CcEEEE
Confidence 9999999999999999999999999765432 58999999999999999999999999987631 589999
Q ss_pred ecccccccCC----CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHH---------H
Q 022386 154 ISATLHYTAT----WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS---------K 220 (298)
Q Consensus 154 vss~~~~~~~----~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~---------~ 220 (298)
+||..+..+. +....|++||+|++.|+++++.|++ ++||+||+|+||+|+|++.......+.... .
T Consensus 156 isS~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~ 234 (278)
T 3sx2_A 156 ISSSAGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLA-GQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGA 234 (278)
T ss_dssp ECCGGGTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CT
T ss_pred EccHHhcCCCccCCCCchHhHHHHHHHHHHHHHHHHHHh-ccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhh
Confidence 9999988776 6678999999999999999999998 889999999999999987543221111111 1
Q ss_pred HhhhccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCC
Q 022386 221 ATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 221 ~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
.....+ +++.+|+|+|++++||+++.++++||+.|.+|||.++
T Consensus 235 ~~~~~p-~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~~ 277 (278)
T 3sx2_A 235 MGNAMP-VEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFLN 277 (278)
T ss_dssp TSCSSS-CSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred hhhhcC-cCcCCHHHHHHHHHHHhCcccccccCCEEeECCCccc
Confidence 122334 6788999999999999999999999999999999765
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-46 Score=325.39 Aligned_cols=249 Identities=27% Similarity=0.375 Sum_probs=219.3
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCC-hhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
.+.++|+||++|||||++|||+++|++|+++|++|++++|+ .+..+...+.+.+.+.++.++.||++++++++++++++
T Consensus 22 ~~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 101 (271)
T 4iin_A 22 SNAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTI 101 (271)
T ss_dssp --CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred hhhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHH
Confidence 34557899999999999999999999999999999999995 55566777778888889999999999999999999999
Q ss_pred HHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
.+.++++|++|||||+....++.+.+.++|++.+++|+.+++++++.++|.|++++ .|+||++||..+..+.
T Consensus 102 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~ 173 (271)
T 4iin_A 102 VQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSR--------FGSVVNVASIIGERGN 173 (271)
T ss_dssp HHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCHHHHHCC
T ss_pred HHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC--------CCEEEEEechhhcCCC
Confidence 99999999999999998878888889999999999999999999999999999876 6899999999999999
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHh
Q 022386 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (298)
Q Consensus 164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L 243 (298)
++...|++||++++.++++++.|++ ++||+||+|+||+++|++.... .++.........+.+++.+|+|+|+++.||
T Consensus 174 ~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~~~~p~dvA~~i~~l 250 (271)
T 4iin_A 174 MGQTNYSASKGGMIAMSKSFAYEGA-LRNIRFNSVTPGFIETDMNANL--KDELKADYVKNIPLNRLGSAKEVAEAVAFL 250 (271)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHH-TTTEEEEEEEECSBCCC--------------CGGGCTTCSCBCHHHHHHHHHHH
T ss_pred CCchHhHHHHHHHHHHHHHHHHHHH-HhCcEEEEEEeCcccCCchhhh--cHHHHHHHHhcCCcCCCcCHHHHHHHHHHH
Confidence 9999999999999999999999998 7899999999999998865432 234445566778899999999999999999
Q ss_pred cCCCCCCccccEEEeCCCCCC
Q 022386 244 ASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 244 ~s~~~~~~~G~~i~~dgG~~~ 264 (298)
+++.+.+++|+.|.+|||.++
T Consensus 251 ~s~~~~~itG~~i~vdGG~~~ 271 (271)
T 4iin_A 251 LSDHSSYITGETLKVNGGLYM 271 (271)
T ss_dssp HSGGGTTCCSCEEEESTTSCC
T ss_pred hCCCcCCCcCCEEEeCCCeeC
Confidence 999999999999999999764
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-46 Score=325.28 Aligned_cols=246 Identities=24% Similarity=0.340 Sum_probs=218.8
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEc-CChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMG-RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~-r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
++++|+++||||++|||+++|++|+++|++|++++ ++.+..++..+.+...+.++.++.||++|.++++++++++.+.+
T Consensus 22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 101 (269)
T 3gk3_A 22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF 101 (269)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 47899999999999999999999999999999998 55666677777777777889999999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
+++|++|||||+....++.+.+.++|++.+++|+.+++++++.++|.|.+++ .|+||++||..+..+.+...
T Consensus 102 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~ 173 (269)
T 3gk3_A 102 GKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERR--------FGRIVNIGSVNGSRGAFGQA 173 (269)
T ss_dssp SCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCHHHHHCCTTBH
T ss_pred CCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--------CCEEEEeCChhhccCCCCcc
Confidence 9999999999988878888899999999999999999999999999998876 68999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~ 247 (298)
.|++||+|++.|+++++.|++ ++||+||+|+||+++|++.... ..+..........+.+++.+|+|+|++++||+++.
T Consensus 174 ~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~ 251 (269)
T 3gk3_A 174 NYASAKAGIHGFTKTLALETA-KRGITVNTVSPGYLATAMVEAV-PQDVLEAKILPQIPVGRLGRPDEVAALIAFLCSDD 251 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCTTTTC--------CCSGGGCTTSSCBCHHHHHHHHHHHTSTT
T ss_pred hHHHHHHHHHHHHHHHHHHhh-hcCCEEEEEecCcccchhhhhh-chhHHHHHhhhcCCcCCccCHHHHHHHHHHHhCCC
Confidence 999999999999999999998 7899999999999999875443 22222224556778899999999999999999999
Q ss_pred CCCccccEEEeCCCCCC
Q 022386 248 GKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 248 ~~~~~G~~i~~dgG~~~ 264 (298)
+.++||+.|++|||.++
T Consensus 252 ~~~itG~~i~vdgG~~~ 268 (269)
T 3gk3_A 252 AGFVTGADLAINGGMHM 268 (269)
T ss_dssp CTTCCSCEEEESTTSCC
T ss_pred cCCeeCcEEEECCCEeC
Confidence 99999999999999875
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-46 Score=322.40 Aligned_cols=249 Identities=23% Similarity=0.318 Sum_probs=223.6
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEc-CChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMG-RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~-r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
.....+++|++|||||++|||+++|++|+++|++|++++ ++.+..++..+.+...+.++.++.+|++|.++++++++++
T Consensus 6 ~~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 85 (256)
T 3ezl_A 6 HHHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKV 85 (256)
T ss_dssp -------CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHH
Confidence 445678899999999999999999999999999999887 6666777888888888888999999999999999999999
Q ss_pred HHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
.+.++++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|.+++ .|+||++||..+..+.
T Consensus 86 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~ 157 (256)
T 3ezl_A 86 KAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERG--------WGRIINISSVNGQKGQ 157 (256)
T ss_dssp HHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCCCGGGSC
T ss_pred HHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--------CCEEEEEcchhhccCC
Confidence 99999999999999988878888999999999999999999999999999999876 6899999999999999
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHh
Q 022386 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (298)
Q Consensus 164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L 243 (298)
+....|++||+|++.|+++++.|++ ++||+||+|+||+++|++.... .++..+.+....+.+++.+|+|+|++++||
T Consensus 158 ~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l 234 (256)
T 3ezl_A 158 FGQTNYSTAKAGIHGFTMSLAQEVA-TKGVTVNTVSPGYIGTDMVKAI--RPDVLEKIVATIPVRRLGSPDEIGSIVAWL 234 (256)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHTS--CHHHHHHHHHHSTTSSCBCHHHHHHHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHHHHHHH-HhCCEEEEEEECcccCcccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 9999999999999999999999998 7899999999999998865443 355566777788999999999999999999
Q ss_pred cCCCCCCccccEEEeCCCCCC
Q 022386 244 ASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 244 ~s~~~~~~~G~~i~~dgG~~~ 264 (298)
+++.+.+++|+.|.+|||.++
T Consensus 235 ~s~~~~~~tG~~i~vdgG~~~ 255 (256)
T 3ezl_A 235 ASEESGFSTGADFSLNGGLHM 255 (256)
T ss_dssp HSGGGTTCCSCEEEESTTSCC
T ss_pred hCCcccCCcCcEEEECCCEeC
Confidence 999999999999999999875
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-47 Score=325.06 Aligned_cols=248 Identities=22% Similarity=0.318 Sum_probs=201.1
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
++|+||++|||||++|||++++++|+++|++|++++|+.+..++..+++ +.++.++.+|++|+++++++++++.+.+
T Consensus 3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 79 (257)
T 3tpc_A 3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL---GAAVRFRNADVTNEADATAALAFAKQEF 79 (257)
T ss_dssp -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC---------------CEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 5689999999999999999999999999999999999988777766655 4568899999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCC----CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 88 GKLDILVNAAAGNFLVPAE----DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
+++|++|||||+....++. +.+.++|++.+++|+.++++++++++|+|+++.. ......|+||++||..+..+.
T Consensus 80 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~--~~~~~~g~iv~isS~~~~~~~ 157 (257)
T 3tpc_A 80 GHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEP--DADGERGVIVNTASIAAFDGQ 157 (257)
T ss_dssp SCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCC--CTTSCCEEEEEECCTHHHHCC
T ss_pred CCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccc--cCCCCCeEEEEEechhhccCC
Confidence 9999999999987554432 5788999999999999999999999999987521 011226899999999999999
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccC-CCCCCHHHHHHHHHH
Q 022386 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA-YKFGEKWDIAMAALY 242 (298)
Q Consensus 164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~ 242 (298)
+....|++||+|++.|+++++.|++ ++||+||+|+||+++|++.... .++..+......|. +++.+|+|+|+++.|
T Consensus 158 ~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~~r~~~~~dva~~v~~ 234 (257)
T 3tpc_A 158 IGQAAYAASKGGVAALTLPAARELA-RFGIRVVTIAPGIFDTPMMAGM--PQDVQDALAASVPFPPRLGRAEEYAALVKH 234 (257)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBSCC----------------CCSSSSCSCBCHHHHHHHHHH
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHH-HcCeEEEEEEeCCCCChhhccC--CHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999998 7899999999999999865432 23444555666777 899999999999999
Q ss_pred hcCCCCCCccccEEEeCCCCCCC
Q 022386 243 LASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 243 L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
|+++ .++||+.|.+|||.++.
T Consensus 235 l~s~--~~itG~~i~vdGG~~~~ 255 (257)
T 3tpc_A 235 ICEN--TMLNGEVIRLDGALRMA 255 (257)
T ss_dssp HHHC--TTCCSCEEEESTTCCC-
T ss_pred Hccc--CCcCCcEEEECCCccCC
Confidence 9975 79999999999998874
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-47 Score=330.70 Aligned_cols=248 Identities=32% Similarity=0.465 Sum_probs=221.6
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhH-HHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
...+|+||++|||||++|||+++|++|+++|++|++++|+.+. .+...+.+...+.++.+++||++|+++++++++++.
T Consensus 41 ~~~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 120 (291)
T 3ijr_A 41 GSEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETV 120 (291)
T ss_dssp CCSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 3457899999999999999999999999999999999998764 455566666778889999999999999999999999
Q ss_pred HHhCCccEEEECCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 85 NHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
++++++|++|||||+.. ..++.+.+.++|++.+++|+.++++++++++|+|++ +|+||++||..+..+.
T Consensus 121 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~----------~g~iv~isS~~~~~~~ 190 (291)
T 3ijr_A 121 RQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ----------GDVIINTASIVAYEGN 190 (291)
T ss_dssp HHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT----------TCEEEEECCTHHHHCC
T ss_pred HHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh----------CCEEEEEechHhcCCC
Confidence 99999999999999764 466778899999999999999999999999999854 4789999999999999
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHh
Q 022386 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (298)
Q Consensus 164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L 243 (298)
+....|++||++++.|+++++.|++ ++||+||+|+||+++|++..... .++....+....+.+++.+|+|+|++++||
T Consensus 191 ~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L 268 (291)
T 3ijr_A 191 ETLIDYSATKGAIVAFTRSLSQSLV-QKGIRVNGVAPGPIWTPLIPSSF-DEKKVSQFGSNVPMQRPGQPYELAPAYVYL 268 (291)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCSTHHHHHS-CHHHHHHTTTTSTTSSCBCGGGTHHHHHHH
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHh-hcCEEEEEEeeCCCcCCcccccC-CHHHHHHHHccCCCCCCcCHHHHHHHHHHH
Confidence 9999999999999999999999998 78999999999999998754433 344455667778999999999999999999
Q ss_pred cCCCCCCccccEEEeCCCCCCC
Q 022386 244 ASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 244 ~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
+++.+.++||+.|.+|||.++.
T Consensus 269 ~s~~~~~itG~~i~vdGG~~~~ 290 (291)
T 3ijr_A 269 ASSDSSYVTGQMIHVNGGVIVN 290 (291)
T ss_dssp HSGGGTTCCSCEEEESSSCCCC
T ss_pred hCCccCCCcCCEEEECCCcccC
Confidence 9999999999999999998764
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-46 Score=326.21 Aligned_cols=252 Identities=22% Similarity=0.299 Sum_probs=219.2
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEc-CChhHHHHHHHHHH-hCCCCeEEEEccCCCHH----------
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMG-RRKTVLRSAVAALH-SLGIPAIGLEGDVRKRE---------- 74 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~-r~~~~~~~~~~~~~-~~~~~~~~~~~Dls~~~---------- 74 (298)
|.+|++|++|||||++|||++++++|+++|++|++++ |+.+.++++.+++. ..+.++.++++|+++++
T Consensus 4 m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 83 (291)
T 1e7w_A 4 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGS 83 (291)
T ss_dssp ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----C
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccc
Confidence 4568999999999999999999999999999999999 99888888888886 55678999999999999
Q ss_pred -------HHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCC--------------HHHHHHHHHhhhHHHHHHHHHHHH
Q 022386 75 -------DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS--------------PNGFRTVIEIDSVGTFIMCHEALK 133 (298)
Q Consensus 75 -------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~ 133 (298)
+++++++++.+.++++|+||||||+....++.+.+ .++|++++++|+.++++++++++|
T Consensus 84 ~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 163 (291)
T 1e7w_A 84 APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAH 163 (291)
T ss_dssp CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 99999999999999999999999987777777888 899999999999999999999999
Q ss_pred HHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC
Q 022386 134 YLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA 213 (298)
Q Consensus 134 ~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~ 213 (298)
+|.+++. ......|+||++||..+..+.+....|++||+++..|+++++.|++ ++||+||+|+||+++|++ . ..
T Consensus 164 ~m~~~~~--~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~-~--~~ 237 (291)
T 1e7w_A 164 RVAGTPA--KHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELA-PLQIRVNGVGPGLSVLVD-D--MP 237 (291)
T ss_dssp HHHTSCG--GGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBCCGG-G--SC
T ss_pred HHHhcCC--CCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHH-hcCeEEEEEeeCCccCCc-c--CC
Confidence 9986531 0001148999999999999999999999999999999999999998 789999999999999987 3 32
Q ss_pred hHHHHHHHhhhccCC-CCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 214 PEEIRSKATDYMAAY-KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 214 ~~~~~~~~~~~~~~~-~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
++....+....|.+ ++.+|+|+|+.++||+++.+.++||+.|.+|||..+.
T Consensus 238 -~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~ 289 (291)
T 1e7w_A 238 -PAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT 289 (291)
T ss_dssp -HHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred -HHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCcccc
Confidence 44445555667887 8999999999999999998999999999999998764
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-46 Score=322.26 Aligned_cols=244 Identities=24% Similarity=0.289 Sum_probs=218.4
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhH--HHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV--LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~--~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
+|+++||||++|||++++++|+++|++|++++|+.+. +++..+++...+.++.++.||++|+++++++++++.+.+++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 81 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG 81 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 7999999999999999999999999999999999877 77788888777778999999999999999999999999999
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCC-cEEEEecccccccCCCCchh
Q 022386 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSG-GIIINISATLHYTATWYQIH 168 (298)
Q Consensus 90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~-g~iv~vss~~~~~~~~~~~~ 168 (298)
+|++|||||.....++.+.+.++|++.+++|+.++++++++++|+|++++ . |+||++||..+..+.+....
T Consensus 82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--------~~g~iv~isS~~~~~~~~~~~~ 153 (258)
T 3a28_C 82 FDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELG--------VKGKIINAASIAAIQGFPILSA 153 (258)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CCCEEEEECCGGGTSCCTTCHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC--------CCcEEEEECcchhccCCCCchh
Confidence 99999999987777788889999999999999999999999999998764 4 89999999999988889999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC-------Ch--HHHHHHHhhhccCCCCCCHHHHHHH
Q 022386 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-------AP--EEIRSKATDYMAAYKFGEKWDIAMA 239 (298)
Q Consensus 169 Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~-------~~--~~~~~~~~~~~~~~~~~~~~dva~~ 239 (298)
|++||++++.|+++++.|++ ++||+||+|+||+++|++..... .+ ++....+....|.+++.+|+|+|++
T Consensus 154 Y~~sK~a~~~~~~~la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~ 232 (258)
T 3a28_C 154 YSTTKFAVRGLTQAAAQELA-PKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGL 232 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-hhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHHHHHHH
Confidence 99999999999999999998 78999999999999988643211 01 2333444555788899999999999
Q ss_pred HHHhcCCCCCCccccEEEeCCCCCC
Q 022386 240 ALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 240 ~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
++||+++.+++++|+.|.+|||..+
T Consensus 233 v~~l~s~~~~~~tG~~i~vdGG~~~ 257 (258)
T 3a28_C 233 VSFLASENSNYVTGQVMLVDGGMLY 257 (258)
T ss_dssp HHHHHSGGGTTCCSCEEEESSSSCC
T ss_pred HHHHhCcccCCCCCCEEEECCCEec
Confidence 9999999899999999999999754
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-46 Score=320.98 Aligned_cols=252 Identities=30% Similarity=0.412 Sum_probs=208.3
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.++|++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++ +.++.++.||++|+++++++++++.+.
T Consensus 4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (261)
T 3n74_A 4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI---GDAALAVAADISKEADVDAAVEAALSK 80 (261)
T ss_dssp -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 35789999999999999999999999999999999999998888777655 567899999999999999999999999
Q ss_pred hCCccEEEECCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC
Q 022386 87 FGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (298)
Q Consensus 87 ~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~ 165 (298)
++++|++|||||... ..++.+.+.++|++.+++|+.++++++++++|+|.+++. ....++||++||..+..+.+.
T Consensus 81 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~----~~~~~~iv~isS~~~~~~~~~ 156 (261)
T 3n74_A 81 FGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGA----KGQECVILNVASTGAGRPRPN 156 (261)
T ss_dssp HSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCTTTTSCCTT
T ss_pred cCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC----CCCCeEEEEeCchhhcCCCCC
Confidence 999999999999865 566777899999999999999999999999999987531 011478999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC--ChHHHHHHHhhhccCCCCCCHHHHHHHHHHh
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL--APEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L 243 (298)
...|++||+|++.|+++++.|++ ++||+||+|+||+++|++..... ..++....+....+.+++.+|+|+|++++||
T Consensus 157 ~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l 235 (261)
T 3n74_A 157 LAWYNATKGWVVSVTKALAIELA-PAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFL 235 (261)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC-------------------------CTTSSCCCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHHHHHHHH
Confidence 99999999999999999999998 78999999999999998755432 2344455667778899999999999999999
Q ss_pred cCCCCCCccccEEEeCCCCCCCC
Q 022386 244 ASDAGKYVNGNTLIVDGGNWLSN 266 (298)
Q Consensus 244 ~s~~~~~~~G~~i~~dgG~~~~~ 266 (298)
+++.+.++||+.|.+|||.++..
T Consensus 236 ~s~~~~~itG~~i~vdgG~~~~~ 258 (261)
T 3n74_A 236 CSPQASMITGVALDVDGGRSIGG 258 (261)
T ss_dssp TSGGGTTCCSCEEEESTTTTC--
T ss_pred cCCcccCcCCcEEEecCCcccCC
Confidence 99999999999999999998853
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-46 Score=324.11 Aligned_cols=250 Identities=27% Similarity=0.375 Sum_probs=218.3
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
+++|++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+ ++.++.||++|+++++++++++.+.
T Consensus 24 ~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~ 102 (276)
T 2b4q_A 24 YFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQALGEL 102 (276)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHHHHh
Confidence 346899999999999999999999999999999999999888888888876555 7889999999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
++++|++|||||+....++.+.+.++|++.+++|+.++++++++++|.|++++.. ...|+||++||..+..+.+..
T Consensus 103 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~----~~~g~iV~isS~~~~~~~~~~ 178 (276)
T 2b4q_A 103 SARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASA----ENPARVINIGSVAGISAMGEQ 178 (276)
T ss_dssp CSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCS----SSCEEEEEECCGGGTCCCCCS
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCC----CCCCEEEEECCHHHcCCCCCC
Confidence 9999999999998777788888999999999999999999999999999876410 012899999999998888777
Q ss_pred h-hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhh--hccCCCCCCHHHHHHHHHHh
Q 022386 167 I-HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD--YMAAYKFGEKWDIAMAALYL 243 (298)
Q Consensus 167 ~-~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~dva~~~~~L 243 (298)
. .|++||++++.|+++++.|++ ++||+||+|+||+++|++..... ++....... ..|.+++.+|+|+|++++||
T Consensus 179 ~~~Y~asK~a~~~~~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l 255 (276)
T 2b4q_A 179 AYAYGPSKAALHQLSRMLAKELV-GEHINVNVIAPGRFPSRMTRHIA--NDPQALEADSASIPMGRWGRPEEMAALAISL 255 (276)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCCCSTTTHHHH--HCHHHHHHHHHTSTTSSCCCHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEeccCcCcchhhcc--hhHHHHHHhhcCCCCCCcCCHHHHHHHHHHH
Confidence 7 999999999999999999998 78999999999999988643211 112223333 56888999999999999999
Q ss_pred cCCCCCCccccEEEeCCCCCC
Q 022386 244 ASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 244 ~s~~~~~~~G~~i~~dgG~~~ 264 (298)
+++.+.+++|+.|.+|||..+
T Consensus 256 ~s~~~~~~tG~~i~vdGG~~L 276 (276)
T 2b4q_A 256 AGTAGAYMTGNVIPIDGGFHL 276 (276)
T ss_dssp HSGGGTTCCSCEEEESTTTTC
T ss_pred hCccccCCCCCEEEeCCCccC
Confidence 999889999999999999753
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-46 Score=318.70 Aligned_cols=242 Identities=31% Similarity=0.424 Sum_probs=206.9
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh-hHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.+|++|+++||||++|||++++++|+++|++|++++|+. +.+++ .+.+.+.++.+++||++|+++++++++++.+.
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (249)
T 2ew8_A 3 QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNLGRRVLTVKCDVSQPGDVEAFGKQVIST 79 (249)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhcCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence 458899999999999999999999999999999999987 65544 44555678999999999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
++++|++|||||+....++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+..+.+..
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~ 151 (249)
T 2ew8_A 80 FGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG--------WGRIINLTSTTYWLKIEAY 151 (249)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGGSCCSSC
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--------CeEEEEEcchhhccCCCCc
Confidence 99999999999987777788889999999999999999999999999998765 6899999999999998899
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC-h-HHHHHHHhhhccCCCCCCHHHHHHHHHHhc
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-P-EEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~dva~~~~~L~ 244 (298)
..|++||++++.++++++.|++ ++||+||+|+||+++|++...... . ++....+. .+.+++.+|+|+|+.++||+
T Consensus 152 ~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~dva~~~~~l~ 228 (249)
T 2ew8_A 152 THYISTKAANIGFTRALASDLG-KDGITVNAIAPSLVRTATTEASALSAMFDVLPNML--QAIPRLQVPLDLTGAAAFLA 228 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCC------------------CTT--SSSCSCCCTHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHHHHHHHH-hcCcEEEEEecCcCcCccchhccccchhhHHHHhh--CccCCCCCHHHHHHHHHHHc
Confidence 9999999999999999999998 789999999999999986541111 1 12212121 57788999999999999999
Q ss_pred CCCCCCccccEEEeCCCCC
Q 022386 245 SDAGKYVNGNTLIVDGGNW 263 (298)
Q Consensus 245 s~~~~~~~G~~i~~dgG~~ 263 (298)
++.+++++|+.|.+|||.+
T Consensus 229 s~~~~~~tG~~~~vdGG~~ 247 (249)
T 2ew8_A 229 SDDASFITGQTLAVDGGMV 247 (249)
T ss_dssp SGGGTTCCSCEEEESSSCC
T ss_pred CcccCCCCCcEEEECCCcc
Confidence 9988999999999999965
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-46 Score=321.03 Aligned_cols=250 Identities=20% Similarity=0.208 Sum_probs=224.4
Q ss_pred CCCCCcEEEEecCC--chhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCC-CeEEEEccCCCHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 8 ~~l~gk~~lVtG~t--~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
.+|+||++|||||+ +|||+++|++|+++|++|++++|+....+...+...+.+. ++.++.||++|+++++++++++.
T Consensus 3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 82 (266)
T 3oig_A 3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIK 82 (266)
T ss_dssp SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHH
T ss_pred cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHH
Confidence 46899999999999 6799999999999999999999987655555555555544 79999999999999999999999
Q ss_pred HHhCCccEEEECCCCCC----CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc
Q 022386 85 NHFGKLDILVNAAAGNF----LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 160 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~ 160 (298)
+.++++|++|||||+.. ..++.+.+.++|+..+++|+.++++++++++|+|++ +|+||++||..+.
T Consensus 83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~----------~g~iv~isS~~~~ 152 (266)
T 3oig_A 83 EQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE----------GGSIVTLTYLGGE 152 (266)
T ss_dssp HHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT----------CEEEEEEECGGGT
T ss_pred HHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC----------CceEEEEeccccc
Confidence 99999999999999865 467778899999999999999999999999999864 5899999999999
Q ss_pred cCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHH
Q 022386 161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240 (298)
Q Consensus 161 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 240 (298)
.+.+....|++||+|++.|+++++.|++ ++||+||+|+||+++|++.......++.........+.+++.+|+|+|+.+
T Consensus 153 ~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v 231 (266)
T 3oig_A 153 LVMPNYNVMGVAKASLDASVKYLAADLG-KENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPEEVGDTA 231 (266)
T ss_dssp SCCTTTHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred ccCCCcchhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEecCcccccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 9999999999999999999999999998 789999999999999987666555566667777888999999999999999
Q ss_pred HHhcCCCCCCccccEEEeCCCCCCCCCC
Q 022386 241 LYLASDAGKYVNGNTLIVDGGNWLSNPR 268 (298)
Q Consensus 241 ~~L~s~~~~~~~G~~i~~dgG~~~~~~~ 268 (298)
+||+++.+.++||+.|.+|||.+...+.
T Consensus 232 ~~l~s~~~~~~tG~~i~vdGG~~~~~~~ 259 (266)
T 3oig_A 232 AFLFSDMSRGITGENLHVDSGFHITARL 259 (266)
T ss_dssp HHHHSGGGTTCCSCEEEESTTGGGCCCC
T ss_pred HHHcCCchhcCcCCEEEECCCeEEeeec
Confidence 9999999999999999999999886544
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-46 Score=315.73 Aligned_cols=240 Identities=30% Similarity=0.433 Sum_probs=214.2
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
+|++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++ + +.++.||++|+++++++++++.+.++
T Consensus 2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~D~~~~~~~~~~~~~~~~~~g 76 (245)
T 1uls_A 2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV---G--AHPVVMDVADPASVERGFAEALAHLG 76 (245)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---T--CEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C--CEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 478999999999999999999999999999999999987766654433 2 78899999999999999999999999
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchh
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~ 168 (298)
++|++|||||.....++.+.+.++|++.+++|+.++++++++++|+|++++ .|+||++||.. ..+.+....
T Consensus 77 ~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~--------~g~iv~isS~~-~~~~~~~~~ 147 (245)
T 1uls_A 77 RLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN--------PGSIVLTASRV-YLGNLGQAN 147 (245)
T ss_dssp SCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC--------CEEEEEECCGG-GGCCTTCHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--------CCEEEEEccch-hcCCCCchh
Confidence 999999999987777788889999999999999999999999999998765 68999999998 778888899
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCC
Q 022386 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (298)
Q Consensus 169 Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~ 248 (298)
|++||+++..++++++.|++ ++||+||+|+||+++|++... . +++.........+.+++.+|+|+|+.++||+++.+
T Consensus 148 Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~-~-~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~ 224 (245)
T 1uls_A 148 YAASMAGVVGLTRTLALELG-RWGIRVNTLAPGFIETRMTAK-V-PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDES 224 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCTTTSS-S-CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHHHHHHh-HhCeEEEEEEeCcCcCcchhh-c-CHHHHHHHHhhCCCCCCcCHHHHHHHHHHHhCchh
Confidence 99999999999999999998 789999999999999986543 2 23344455566788899999999999999999988
Q ss_pred CCccccEEEeCCCCCCC
Q 022386 249 KYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 249 ~~~~G~~i~~dgG~~~~ 265 (298)
.+++|+.+.+|||..+.
T Consensus 225 ~~~tG~~~~vdgG~~~~ 241 (245)
T 1uls_A 225 SFITGQVLFVDGGRTIG 241 (245)
T ss_dssp TTCCSCEEEESTTTTTT
T ss_pred cCCcCCEEEECCCcccC
Confidence 99999999999998764
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-46 Score=324.23 Aligned_cols=245 Identities=27% Similarity=0.383 Sum_probs=215.8
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
....+++||++|||||++|||+++|++|+++|++|++++|+.+.. ...+.+++||++|+++++++++++.
T Consensus 7 ~~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~~ 76 (269)
T 3vtz_A 7 HHMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD----------VNVSDHFKIDVTNEEEVKEAVEKTT 76 (269)
T ss_dssp ---CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C----------TTSSEEEECCTTCHHHHHHHHHHHH
T ss_pred ccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc----------cCceeEEEecCCCHHHHHHHHHHHH
Confidence 355688999999999999999999999999999999999986532 1257789999999999999999999
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~ 164 (298)
+.++++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|.+++ .|+||++||..++.+.+
T Consensus 77 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~ 148 (269)
T 3vtz_A 77 KKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIG--------HGSIINIASVQSYAATK 148 (269)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSBCT
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--------CCEEEEECchhhccCCC
Confidence 9999999999999988778888899999999999999999999999999998876 68999999999999999
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC---------ChHHHHHHHhhhccCCCCCCHHH
Q 022386 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---------APEEIRSKATDYMAAYKFGEKWD 235 (298)
Q Consensus 165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~d 235 (298)
....|++||+|++.|+++++.|++ + ||+||+|+||+++|++..... ..++..+.+....+.+++.+|+|
T Consensus 149 ~~~~Y~asKaa~~~l~~~la~e~~-~-~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~ped 226 (269)
T 3vtz_A 149 NAAAYVTSKHALLGLTRSVAIDYA-P-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEE 226 (269)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHT-T-TEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHH
T ss_pred CChhHHHHHHHHHHHHHHHHHHhc-C-CCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHHH
Confidence 999999999999999999999997 6 899999999999987643211 01344556667789999999999
Q ss_pred HHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCC
Q 022386 236 IAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRD 269 (298)
Q Consensus 236 va~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~ 269 (298)
+|++++||+++.+.++||++|.+|||.....+..
T Consensus 227 vA~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~ 260 (269)
T 3vtz_A 227 VAEVVAFLASDRSSFITGACLTVDGGLLSKLPIS 260 (269)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTGGGBCCCC
T ss_pred HHHHHHHHhCCccCCCcCcEEEECCCccccCCCC
Confidence 9999999999999999999999999988765443
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-47 Score=330.70 Aligned_cols=248 Identities=31% Similarity=0.360 Sum_probs=213.6
Q ss_pred CCCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCC------------hhHHHHHHHHHHhCCCCeEEEEccCC
Q 022386 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR------------KTVLRSAVAALHSLGIPAIGLEGDVR 71 (298)
Q Consensus 4 ~~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~Dls 71 (298)
|.+|.+|+||++|||||++|||+++|++|+++|++|++++|+ .+.+++...++...+.++.++.||++
T Consensus 2 p~~m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 81 (287)
T 3pxx_A 2 PGSMGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVR 81 (287)
T ss_dssp TTSCCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTT
T ss_pred CCcccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCC
Confidence 456788999999999999999999999999999999999987 66777777888777889999999999
Q ss_pred CHHHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEE
Q 022386 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGII 151 (298)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~i 151 (298)
|+++++++++++.+.++++|+||||||+.... . +.+.++|++.+++|+.++++++++++|+|.+ +|+|
T Consensus 82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~-~-~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~----------~g~i 149 (287)
T 3pxx_A 82 DRAAVSRELANAVAEFGKLDVVVANAGICPLG-A-HLPVQAFADAFDVDFVGVINTVHAALPYLTS----------GASI 149 (287)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC-T-TCCTHHHHHHHHHHTHHHHHHHHHHGGGCCT----------TCEE
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCcCccc-C-cCCHHHHHHHhhhhhhhhHHHHHHHHHHhhc----------CcEE
Confidence 99999999999999999999999999986544 2 3688999999999999999999999999932 5889
Q ss_pred EEecccccccCC-----------CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC--------
Q 022386 152 INISATLHYTAT-----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-------- 212 (298)
Q Consensus 152 v~vss~~~~~~~-----------~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~-------- 212 (298)
|++||..+..+. +....|++||++++.|+++++.|++ ++||+||+|+||+++|++.....
T Consensus 150 v~isS~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~ 228 (287)
T 3pxx_A 150 ITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLA-PQSIRANVIHPTNVNTDMLNSAPMYRQFRPD 228 (287)
T ss_dssp EEECCHHHHHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEESSBSSTTTSSHHHHHHHCTT
T ss_pred EEeccchhcccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHh-hcCcEEEEEecCccccccccccchhhhhccc
Confidence 999999887654 5678899999999999999999998 78999999999999998754310
Q ss_pred ----ChHHHHHH--HhhhccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 213 ----APEEIRSK--ATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 213 ----~~~~~~~~--~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
...+.... .....+ +++.+|+|+|++++||+++.++++||++|.+|||.++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~-~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~~ 286 (287)
T 3pxx_A 229 LEAPSRADALLAFPAMQAMP-TPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAMLK 286 (287)
T ss_dssp SSSCCHHHHHHHGGGGCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred cccchhHHHHhhhhhhcccC-CCCCCHHHHHhhHheecchhhcCCCCceEeECchhhhc
Confidence 00111111 222334 78999999999999999999999999999999998764
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-46 Score=322.89 Aligned_cols=249 Identities=28% Similarity=0.367 Sum_probs=222.2
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
.|.+|++|++|||||++|||+++++.|+++|++|++++|+.+.+++..+++.+.+.++.++.||++|+++++++++++.+
T Consensus 16 ~m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 95 (277)
T 2rhc_B 16 HMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVE 95 (277)
T ss_dssp TTCCTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 34468999999999999999999999999999999999999888888888877778899999999999999999999999
Q ss_pred HhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHH--HHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY--LKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
.++++|++|||||+....++.+.+.++|++.+++|+.++++++++++|. |.+++ .|+||++||..+..+.
T Consensus 96 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~--------~g~iv~isS~~~~~~~ 167 (277)
T 2rhc_B 96 RYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG--------TGRIVNIASTGGKQGV 167 (277)
T ss_dssp HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHT--------EEEEEEECCGGGTSCC
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcC--------CeEEEEECccccccCC
Confidence 9999999999999877777888899999999999999999999999999 88764 5899999999999888
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC---h------HHHHHHHhhhccCCCCCCHH
Q 022386 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---P------EEIRSKATDYMAAYKFGEKW 234 (298)
Q Consensus 164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~---~------~~~~~~~~~~~~~~~~~~~~ 234 (298)
+....|++||++++.++++++.|++ ++||+||+|+||+++|++...... . ++....+....|.+++.+|+
T Consensus 168 ~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~ 246 (277)
T 2rhc_B 168 VHAAPYSASKHGVVGFTKALGLELA-RTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPS 246 (277)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHT-TTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHH
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHH-HhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHH
Confidence 8899999999999999999999998 789999999999999875432110 1 23334445567888999999
Q ss_pred HHHHHHHHhcCCCCCCccccEEEeCCCCC
Q 022386 235 DIAMAALYLASDAGKYVNGNTLIVDGGNW 263 (298)
Q Consensus 235 dva~~~~~L~s~~~~~~~G~~i~~dgG~~ 263 (298)
|+|++++||+++.+.+++|+.|.+|||..
T Consensus 247 dvA~~v~~l~s~~~~~~tG~~~~vdGG~~ 275 (277)
T 2rhc_B 247 EVAEMVAYLIGPGAAAVTAQALNVCGGLG 275 (277)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred HHHHHHHHHhCchhcCCCCcEEEECCCcc
Confidence 99999999999988999999999999965
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-46 Score=322.71 Aligned_cols=244 Identities=25% Similarity=0.331 Sum_probs=211.5
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
+|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+. .+.++.++.||++++++++++++++.+.++
T Consensus 2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 78 (281)
T 3zv4_A 2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVA---HGGNAVGVVGDVRSLQDQKRAAERCLAAFG 78 (281)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---TBTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHH---cCCcEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 58899999999999999999999999999999999998877665544 366799999999999999999999999999
Q ss_pred CccEEEECCCCCCC-CCC----CCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 89 KLDILVNAAAGNFL-VPA----EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 89 ~id~li~~ag~~~~-~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
++|+||||||+... .++ .+.+.++|++.+++|+.++++++++++|+|.++ +|+||++||..+..+.
T Consensus 79 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~---------~g~iv~isS~~~~~~~ 149 (281)
T 3zv4_A 79 KIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS---------RGSVVFTISNAGFYPN 149 (281)
T ss_dssp CCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---------TCEEEEECCGGGTSSS
T ss_pred CCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc---------CCeEEEEecchhccCC
Confidence 99999999997533 222 244567899999999999999999999999875 4899999999999999
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC--------ChHHHHHHHhhhccCCCCCCHHH
Q 022386 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL--------APEEIRSKATDYMAAYKFGEKWD 235 (298)
Q Consensus 164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~d 235 (298)
+....|++||+|++.|+++++.|++ +. ||||+|+||+++|++..... ...+..+.+....|.+++.+|+|
T Consensus 150 ~~~~~Y~asKaa~~~l~~~la~e~~-~~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~ped 227 (281)
T 3zv4_A 150 GGGPLYTATKHAVVGLVRQMAFELA-PH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEE 227 (281)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHT-TT-SEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGGG
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhc-CC-CEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCCCCCCHHH
Confidence 9999999999999999999999997 65 99999999999998653321 11124455667789999999999
Q ss_pred HHHHHHHhcC-CCCCCccccEEEeCCCCCCCC
Q 022386 236 IAMAALYLAS-DAGKYVNGNTLIVDGGNWLSN 266 (298)
Q Consensus 236 va~~~~~L~s-~~~~~~~G~~i~~dgG~~~~~ 266 (298)
+|++++||++ +.+.++||++|.+|||.++..
T Consensus 228 vA~~v~fL~s~~~~~~itG~~i~vdGG~~~~~ 259 (281)
T 3zv4_A 228 YTGAYVFFATRGDSLPATGALLNYDGGMGVRG 259 (281)
T ss_dssp GSHHHHHHHSTTTSTTCSSCEEEESSSGGGCC
T ss_pred HHHHHHHhhcccccccccCcEEEECCCCcccc
Confidence 9999999999 788899999999999998854
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-46 Score=319.66 Aligned_cols=240 Identities=22% Similarity=0.262 Sum_probs=198.6
Q ss_pred CCCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHH
Q 022386 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 4 ~~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
++++++|+||++|||||++|||+++|++|+++|++|++++|+.+...+.... .+ +.++.||++|+++++++++++
T Consensus 19 ~~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~--~~~~~~Dv~~~~~v~~~~~~~ 93 (260)
T 3gem_A 19 FQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQ---AG--AVALYGDFSCETGIMAFIDLL 93 (260)
T ss_dssp --------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHH---HT--CEEEECCTTSHHHHHHHHHHH
T ss_pred cccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHh---cC--CeEEECCCCCHHHHHHHHHHH
Confidence 4667789999999999999999999999999999999999998765433332 22 788999999999999999999
Q ss_pred HHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
.+.++++|++|||||+..... .+.+.++|++.+++|+.++++++++++|+|++++ .|+||++||..+..+.
T Consensus 94 ~~~~g~iD~lv~nAg~~~~~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~--------~g~iv~isS~~~~~~~ 164 (260)
T 3gem_A 94 KTQTSSLRAVVHNASEWLAET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASE--------VADIVHISDDVTRKGS 164 (260)
T ss_dssp HHHCSCCSEEEECCCCCCCCC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS--------SCEEEEECCGGGGTCC
T ss_pred HHhcCCCCEEEECCCccCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------CcEEEEECChhhcCCC
Confidence 999999999999999865554 5667899999999999999999999999999865 6899999999999999
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHh
Q 022386 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (298)
Q Consensus 164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L 243 (298)
+....|++||+|++.|+++++.|++ + +|+||+|+||+++|++.. .+..........+.+++.+|+|+|++++||
T Consensus 165 ~~~~~Y~asKaa~~~l~~~la~e~~-~-~Irvn~v~PG~v~t~~~~----~~~~~~~~~~~~p~~r~~~~edva~~v~~L 238 (260)
T 3gem_A 165 SKHIAYCATKAGLESLTLSFAARFA-P-LVKVNGIAPALLMFQPKD----DAAYRANALAKSALGIEPGAEVIYQSLRYL 238 (260)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHT-T-TCEEEEEEECTTCC-------------------CCSCCCCCTHHHHHHHHHH
T ss_pred CCcHhHHHHHHHHHHHHHHHHHHHC-C-CCEEEEEeecccccCCCC----CHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 9999999999999999999999997 6 799999999999987532 233445556677899999999999999999
Q ss_pred cCCCCCCccccEEEeCCCCCCC
Q 022386 244 ASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 244 ~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
+ .+.++||+.|.+|||.++.
T Consensus 239 ~--~~~~itG~~i~vdGG~~~~ 258 (260)
T 3gem_A 239 L--DSTYVTGTTLTVNGGRHVK 258 (260)
T ss_dssp H--HCSSCCSCEEEESTTTTTC
T ss_pred h--hCCCCCCCEEEECCCcccC
Confidence 9 4689999999999998875
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-46 Score=324.67 Aligned_cols=264 Identities=23% Similarity=0.219 Sum_probs=223.4
Q ss_pred CCCCCcEEEEecCC--chhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 8 ~~l~gk~~lVtG~t--~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
.+|+||+++||||+ +|||++++++|+++|++|++++|+.+ .++..+++.+..+.+.++.||++|+++++++++++.+
T Consensus 2 ~~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 80 (275)
T 2pd4_A 2 GFLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKK 80 (275)
T ss_dssp CTTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHH
Confidence 46889999999999 99999999999999999999999875 4445555544333478899999999999999999999
Q ss_pred HhCCccEEEECCCCCCC----CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc
Q 022386 86 HFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 161 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~ 161 (298)
.++++|++|||||+... .++.+.+.++|++.+++|+.++++++++++|.|++ +|+||++||..+..
T Consensus 81 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~----------~g~iv~isS~~~~~ 150 (275)
T 2pd4_A 81 DLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN----------GASVLTLSYLGSTK 150 (275)
T ss_dssp HTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE----------EEEEEEEECGGGTS
T ss_pred HcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc----------CCEEEEEecchhcC
Confidence 99999999999998653 56778899999999999999999999999999964 48899999999998
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHH
Q 022386 162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241 (298)
Q Consensus 162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~ 241 (298)
+.+....|++||++++.++++++.|++ ++||+||+|+||+++|++.......++....+....|.+++.+|+|+|+.++
T Consensus 151 ~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~ 229 (275)
T 2pd4_A 151 YMAHYNVMGLAKAALESAVRYLAVDLG-KHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGM 229 (275)
T ss_dssp BCTTCHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHH
T ss_pred CCCCchhhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCcCCCCCHHHHHHHHH
Confidence 888899999999999999999999998 7899999999999999875443223444455556678889999999999999
Q ss_pred HhcCCCCCCccccEEEeCCCCCCC--CCCCCchhHHHhhHHhhh
Q 022386 242 YLASDAGKYVNGNTLIVDGGNWLS--NPRDLPKEAVNQLSRAVE 283 (298)
Q Consensus 242 ~L~s~~~~~~~G~~i~~dgG~~~~--~~~~~~~~~~~~~~~~~~ 283 (298)
||+++.+.+++|+.+.+|||..+. .+....+...+++|+.++
T Consensus 230 ~l~s~~~~~~tG~~~~vdgg~~~~~~~~~~~~~~~~~~lw~~s~ 273 (275)
T 2pd4_A 230 YLLSSLSSGVSGEVHFVDAGYHVMGMGAVEEKDNKATLLWDLHK 273 (275)
T ss_dssp HHHSGGGTTCCSCEEEESTTGGGBSSCCCTTCTTTTCCHHHHSS
T ss_pred HHhCccccCCCCCEEEECCCcccCCCChhhcCcccchhhhhhhc
Confidence 999998899999999999998762 222333444555555544
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-46 Score=332.31 Aligned_cols=278 Identities=24% Similarity=0.321 Sum_probs=232.0
Q ss_pred CCCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCC----------hhHHHHHHHHHHhCCCCeEEEEccCCCH
Q 022386 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR----------KTVLRSAVAALHSLGIPAIGLEGDVRKR 73 (298)
Q Consensus 4 ~~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~----------~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 73 (298)
|.+|.+|+||++|||||++|||+++|++|+++|++|++++|+ .+.+++..+++.+.+.++.++.||++|+
T Consensus 19 p~~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~ 98 (322)
T 3qlj_A 19 PGSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADW 98 (322)
T ss_dssp ---CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSH
T ss_pred CchhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCH
Confidence 456778999999999999999999999999999999999988 6778888888988888899999999999
Q ss_pred HHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEE
Q 022386 74 EDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIIN 153 (298)
Q Consensus 74 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~ 153 (298)
++++++++++.+.++++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|.+.... ....+|+||+
T Consensus 99 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~--~~~~~g~IV~ 176 (322)
T 3qlj_A 99 DQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKA--GKAVDGRIIN 176 (322)
T ss_dssp HHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCCCCEEEEE
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcccc--CCCCCcEEEE
Confidence 99999999999999999999999999887888889999999999999999999999999999864210 0011479999
Q ss_pred ecccccccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCH
Q 022386 154 ISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEK 233 (298)
Q Consensus 154 vss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (298)
+||..+..+.+....|++||+|++.|+++++.|++ ++||+||+|+|| +.|++........ .. ......++.+|
T Consensus 177 isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~-~~gI~vn~v~PG-~~t~~~~~~~~~~-~~----~~~~~~~~~~p 249 (322)
T 3qlj_A 177 TSSGAGLQGSVGQGNYSAAKAGIATLTLVGAAEMG-RYGVTVNAIAPS-ARTRMTETVFAEM-MA----TQDQDFDAMAP 249 (322)
T ss_dssp ECCHHHHHCBTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC-TTSCCSCCSCCC-------------CCTTCG
T ss_pred EcCHHHccCCCCCccHHHHHHHHHHHHHHHHHHhc-ccCcEEEEecCC-CCCccchhhhhhh-hh----ccccccCCCCH
Confidence 99999999999999999999999999999999998 789999999999 8887654433221 11 11122346799
Q ss_pred HHHHHHHHHhcCCCCCCccccEEEeCCCCCCCC------------CCCCchhHHHhhHHhhhhccCCCC
Q 022386 234 WDIAMAALYLASDAGKYVNGNTLIVDGGNWLSN------------PRDLPKEAVNQLSRAVERKSRDSP 290 (298)
Q Consensus 234 ~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~ 290 (298)
+|+|++++||+++.+.++||+.|.+|||..... ..|..+.+.+.+.+.+.+..++.|
T Consensus 250 edva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~ 318 (322)
T 3qlj_A 250 ENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKARPPVP 318 (322)
T ss_dssp GGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHSCCCCC
T ss_pred HHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhccCCCCC
Confidence 999999999999999999999999999987632 244557777777776665544433
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-46 Score=318.07 Aligned_cols=245 Identities=29% Similarity=0.393 Sum_probs=218.3
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
+|+++||||++|||++++++|+++|++|++++|+.+.++++.+++...+.++.++.||++|+++++++++++.+.++++|
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 81 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD 81 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 68999999999999999999999999999999999888888888877777899999999999999999999999999999
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHH
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~ 171 (298)
++|||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. .|+||++||..+..+.+....|++
T Consensus 82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y~a 154 (256)
T 1geg_A 82 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGH-------GGKIINACSQAGHVGNPELAVYSS 154 (256)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-------CEEEEEECCGGGTSCCTTBHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-------CCEEEEECchhhcCCCCCchhHHH
Confidence 9999999877777888899999999999999999999999999987531 378999999999989889999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC---------ChHHHHHHHhhhccCCCCCCHHHHHHHHHH
Q 022386 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---------APEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (298)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 242 (298)
||++++.++++++.|++ ++||+||+|+||+++|++..... ..++....+....|.+++.+|+|+|++++|
T Consensus 155 sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~ 233 (256)
T 1geg_A 155 SKFAVRGLTQTAARDLA-PLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSY 233 (256)
T ss_dssp HHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-HcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 99999999999999998 78999999999999987643210 012233344555688899999999999999
Q ss_pred hcCCCCCCccccEEEeCCCCCC
Q 022386 243 LASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 243 L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
|+++.+.+++|+.|.+|||..+
T Consensus 234 l~s~~~~~~tG~~i~vdGG~~~ 255 (256)
T 1geg_A 234 LASPDSDYMTGQSLLIDGGMVF 255 (256)
T ss_dssp HHSGGGTTCCSCEEEESSSSSC
T ss_pred HhCccccCCCCCEEEeCCCccC
Confidence 9999889999999999999754
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-46 Score=318.31 Aligned_cols=245 Identities=24% Similarity=0.341 Sum_probs=213.6
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC--CCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
+|++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +.++.++.+|++|+++++++++++.+.
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (260)
T 2z1n_A 4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDL 83 (260)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence 588999999999999999999999999999999999988888887777643 337899999999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
++ +|++|||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+..+.+..
T Consensus 84 ~g-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~ 154 (260)
T 2z1n_A 84 GG-ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG--------WGRMVYIGSVTLLRPWQDL 154 (260)
T ss_dssp TC-CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCTTB
T ss_pred cC-CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--------CcEEEEECchhhcCCCCCC
Confidence 99 99999999987777778889999999999999999999999999998765 6899999999999998899
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccC---------cCChHHHHHHHhhhccCCCCCCHHHHH
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS---------KLAPEEIRSKATDYMAAYKFGEKWDIA 237 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~dva 237 (298)
..|++||++++.++++++.|++ ++||+||+|+||+++|++... ....+.....+....|.+++.+|+|+|
T Consensus 155 ~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva 233 (260)
T 2z1n_A 155 ALSNIMRLPVIGVVRTLALELA-PHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELA 233 (260)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHG-GGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCCCHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHh-hhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHH
Confidence 9999999999999999999998 789999999999999986541 111111123344556888999999999
Q ss_pred HHHHHhcCCCCCCccccEEEeCCCCC
Q 022386 238 MAALYLASDAGKYVNGNTLIVDGGNW 263 (298)
Q Consensus 238 ~~~~~L~s~~~~~~~G~~i~~dgG~~ 263 (298)
+.++||+++.+++++|+.|.+|||.+
T Consensus 234 ~~v~~l~s~~~~~~tG~~i~vdGG~~ 259 (260)
T 2z1n_A 234 SVVAFLASEKASFITGAVIPVDGGAH 259 (260)
T ss_dssp HHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred HHHHHHhCccccCCCCCEEEeCCCcc
Confidence 99999999988999999999999965
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-46 Score=322.25 Aligned_cols=262 Identities=24% Similarity=0.246 Sum_probs=216.1
Q ss_pred CCCCCCcEEEEecCC--chhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t--~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
|.+|+||++|||||+ +|||++++++|+++|++|++++|+.+ .++..+++.+..+.+.++.||++|+++++++++++.
T Consensus 16 m~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 94 (285)
T 2p91_A 16 MGLLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLE 94 (285)
T ss_dssp -CTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred hhccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHH
Confidence 345899999999999 99999999999999999999999875 444555554433347889999999999999999999
Q ss_pred HHhCCccEEEECCCCCCC----CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc
Q 022386 85 NHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 160 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~ 160 (298)
+.++++|++|||||+... .++.+.+.++|++.+++|+.++++++++++|.|.++ +|+||++||..+.
T Consensus 95 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~---------~g~iv~isS~~~~ 165 (285)
T 2p91_A 95 ENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR---------NGAIVTLSYYGAE 165 (285)
T ss_dssp HHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS---------CCEEEEEECGGGT
T ss_pred HHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc---------CCEEEEEccchhc
Confidence 999999999999997653 567778999999999999999999999999999753 4899999999998
Q ss_pred cCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHH
Q 022386 161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240 (298)
Q Consensus 161 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 240 (298)
.+.+....|++||++++.++++++.|++ ++||+||+|+||+++|++.......++....+....|.+++.+|+|+|+.+
T Consensus 166 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~ 244 (285)
T 2p91_A 166 KVVPHYNVMGIAKAALESTVRYLAYDIA-KHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTA 244 (285)
T ss_dssp SBCTTTTHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTTSSCCCHHHHHHHH
T ss_pred cCCCCccHHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 8888889999999999999999999998 789999999999999986543222244445555667888999999999999
Q ss_pred HHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhH
Q 022386 241 LYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLS 279 (298)
Q Consensus 241 ~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~ 279 (298)
+||+++.+.+++|+.+.+|||..+.......+.+.++||
T Consensus 245 ~~l~s~~~~~~tG~~~~vdgg~~~~~~~~~~~~~~~~lw 283 (285)
T 2p91_A 245 VFLCSDWARAITGEVVHVDNGYHIMGVFGREEEIKKEVY 283 (285)
T ss_dssp HHHTSGGGTTCCSCEEEESTTGGGBSCC-----------
T ss_pred HHHcCCcccCCCCCEEEECCCcccccccCChHHHHHHhc
Confidence 999999889999999999999887555444455555555
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-46 Score=321.71 Aligned_cols=240 Identities=25% Similarity=0.379 Sum_probs=212.3
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
.+|.+|+||++|||||++|||+++|++|+++|++|++++|+.+..+ ....+.+|+++.++++++++++.
T Consensus 21 ~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~-----------~~~~~~~Dv~~~~~~~~~~~~~~ 89 (266)
T 3uxy_A 21 QSMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA-----------ADLHLPGDLREAAYADGLPGAVA 89 (266)
T ss_dssp -----CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC-----------CSEECCCCTTSHHHHHHHHHHHH
T ss_pred hhhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-----------hhhccCcCCCCHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999999865321 12445899999999999999999
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~ 164 (298)
+.++++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|++++ .|+||++||..+..+.+
T Consensus 90 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~--------~g~iv~isS~~~~~~~~ 161 (266)
T 3uxy_A 90 AGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAG--------GGAIVNVASCWGLRPGP 161 (266)
T ss_dssp HHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCSBTTBCCT
T ss_pred HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--------CcEEEEECCHHhCCCCC
Confidence 9999999999999998878888899999999999999999999999999999876 69999999999999999
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc-----CChHHHHHHHhhhccCCCCCCHHHHHHH
Q 022386 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK-----LAPEEIRSKATDYMAAYKFGEKWDIAMA 239 (298)
Q Consensus 165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (298)
....|++||+|++.|+++++.|++ ++||+||+|+||+++|++.... ...++....+....+.+++.+|+|+|++
T Consensus 162 ~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~ 240 (266)
T 3uxy_A 162 GHALYCLTKAALASLTQCMGMDHA-PQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADV 240 (266)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 999999999999999999999998 7899999999999998864321 2334445667778899999999999999
Q ss_pred HHHhcCCCCCCccccEEEeCCCCCC
Q 022386 240 ALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 240 ~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
++||+++.++++||+.|.+|||.++
T Consensus 241 v~~L~s~~~~~itG~~i~vdGG~~~ 265 (266)
T 3uxy_A 241 VLFLASDAARYLCGSLVEVNGGKAV 265 (266)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred HHHHhCchhcCCcCCEEEECcCEeC
Confidence 9999999999999999999999875
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-46 Score=320.19 Aligned_cols=246 Identities=28% Similarity=0.446 Sum_probs=186.0
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.+.++.++.||++|+++++++++++.+.
T Consensus 4 ~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (253)
T 3qiv_A 4 SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAE 83 (253)
T ss_dssp -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 45689999999999999999999999999999999999999999999999888888999999999999999999999999
Q ss_pred hCCccEEEECCCCC---CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 87 FGKLDILVNAAAGN---FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 87 ~~~id~li~~ag~~---~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
++++|++|||||+. ...++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..++
T Consensus 84 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~--- 152 (253)
T 3qiv_A 84 FGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRG--------GGAIVNQSSTAAW--- 152 (253)
T ss_dssp HSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--------CEEEEEECC-------
T ss_pred cCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC--------CCEEEEECCcccc---
Confidence 99999999999973 445677889999999999999999999999999999876 6899999999876
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHh
Q 022386 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (298)
Q Consensus 164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L 243 (298)
+....|++||++++.|+++++.|++ ++||+||+|+||+++|++.... .+++.........+.+++.+|+|+|+++.||
T Consensus 153 ~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l 230 (253)
T 3qiv_A 153 LYSNYYGLAKVGINGLTQQLSRELG-GRNIRINAIAPGPIDTEANRTT-TPKEMVDDIVKGLPLSRMGTPDDLVGMCLFL 230 (253)
T ss_dssp -------CCHHHHHHHHHHHHHHTT-TTTEEEEEEEC--------------------------------CCHHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHh-hcCeEEEEEEecCCcccchhhc-CcHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Confidence 4466899999999999999999997 7899999999999999865443 2344555666777888999999999999999
Q ss_pred cCCCCCCccccEEEeCCCCCCC
Q 022386 244 ASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 244 ~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
+++.+.+++|+.|++|||..++
T Consensus 231 ~s~~~~~~tG~~~~vdgG~~~~ 252 (253)
T 3qiv_A 231 LSDEASWITGQIFNVDGGQIIR 252 (253)
T ss_dssp HSGGGTTCCSCEEEC-------
T ss_pred cCccccCCCCCEEEECCCeecC
Confidence 9999999999999999998764
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-46 Score=321.39 Aligned_cols=250 Identities=21% Similarity=0.214 Sum_probs=221.9
Q ss_pred CCCCCCCCcEEEEecCC--chhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES 82 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t--~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~ 82 (298)
-.|.+|++|++|||||+ +|||+++|++|+++|++|++++|+. .++..+++.+...++.++.||+++++++++++++
T Consensus 19 ~~M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~ 96 (280)
T 3nrc_A 19 SHMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVE 96 (280)
T ss_dssp ---CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHH
T ss_pred CcccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHH
Confidence 34668999999999988 7899999999999999999999987 3455556655556789999999999999999999
Q ss_pred HHHHhCCccEEEECCCCCCC----CCCCC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccc
Q 022386 83 TINHFGKLDILVNAAAGNFL----VPAED-LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 157 (298)
Q Consensus 83 ~~~~~~~id~li~~ag~~~~----~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~ 157 (298)
+.+.++++|++|||||+... .++.+ .+.++|++.+++|+.++++++++++|+|.++ .|+||++||.
T Consensus 97 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~---------~g~iv~isS~ 167 (280)
T 3nrc_A 97 LGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR---------NASMVALTYI 167 (280)
T ss_dssp HHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT---------TCEEEEEECG
T ss_pred HHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC---------CCeEEEEecc
Confidence 99999999999999997653 44444 7899999999999999999999999999865 4899999999
Q ss_pred ccccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHH
Q 022386 158 LHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA 237 (298)
Q Consensus 158 ~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva 237 (298)
.+..+.+....|++||+|++.|+++++.|++ ++||+||+|+||+++|++.......++.........+.+++.+|+|+|
T Consensus 168 ~~~~~~~~~~~Y~asKaal~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA 246 (280)
T 3nrc_A 168 GAEKAMPSYNTMGVAKASLEATVRYTALALG-EDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVG 246 (280)
T ss_dssp GGTSCCTTTHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTTCSCCCHHHHH
T ss_pred ccccCCCCchhhHHHHHHHHHHHHHHHHHHH-HcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCCCCCCCHHHHH
Confidence 9999999999999999999999999999998 789999999999999987766555566777778888999999999999
Q ss_pred HHHHHhcCCCCCCccccEEEeCCCCCCCC
Q 022386 238 MAALYLASDAGKYVNGNTLIVDGGNWLSN 266 (298)
Q Consensus 238 ~~~~~L~s~~~~~~~G~~i~~dgG~~~~~ 266 (298)
++++||+++.+.++||+.|.+|||.++..
T Consensus 247 ~~v~~l~s~~~~~~tG~~i~vdgG~~~~~ 275 (280)
T 3nrc_A 247 NTVAFLCSDMATGITGEVVHVDAGYHCVS 275 (280)
T ss_dssp HHHHHTTSGGGTTCCSCEEEESTTGGGCC
T ss_pred HHHHHHhCcccCCcCCcEEEECCCccccC
Confidence 99999999999999999999999998753
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-46 Score=321.41 Aligned_cols=248 Identities=29% Similarity=0.383 Sum_probs=221.7
Q ss_pred CCCCCCCCcEEEEecCC--chhHHHHHHHHHHcCCcEEEEcCChhHH-HHHHHHHHh-CCCCeEEEEccCCCHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVL-RSAVAALHS-LGIPAIGLEGDVRKREDAVRVV 80 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t--~giG~~ia~~l~~~G~~Vv~~~r~~~~~-~~~~~~~~~-~~~~~~~~~~Dls~~~~~~~~~ 80 (298)
+++.+|+||+++||||+ +|||++++++|+++|++|++++|+.... ++..+++.+ .+.++.+++||++|++++++++
T Consensus 13 ~~~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~ 92 (267)
T 3gdg_A 13 LDQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLV 92 (267)
T ss_dssp HHHHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHH
T ss_pred ccccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHH
Confidence 34468999999999999 9999999999999999999998886544 566666654 4778999999999999999999
Q ss_pred HHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc
Q 022386 81 ESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 160 (298)
Q Consensus 81 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~ 160 (298)
+++.+.++++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|++++ .|+||++||..+.
T Consensus 93 ~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~ 164 (267)
T 3gdg_A 93 KDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERG--------TGSLVITASMSGH 164 (267)
T ss_dssp HHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CCEEEEECCGGGT
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcC--------CceEEEEcccccc
Confidence 99999999999999999998888888999999999999999999999999999999876 6899999999887
Q ss_pred cCC--CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHH
Q 022386 161 TAT--WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 238 (298)
Q Consensus 161 ~~~--~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 238 (298)
.+. +....|++||++++.|+++++.|++ +. |+||+|+||+++|++.... +++..+.+....+.+++.+|+|+|+
T Consensus 165 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~-i~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~r~~~~~dva~ 240 (267)
T 3gdg_A 165 IANFPQEQTSYNVAKAGCIHMARSLANEWR-DF-ARVNSISPGYIDTGLSDFV--PKETQQLWHSMIPMGRDGLAKELKG 240 (267)
T ss_dssp SCCSSSCCHHHHHHHHHHHHHHHHHHHHTT-TT-CEEEEEEECCEECSCGGGS--CHHHHHHHHTTSTTSSCEETHHHHH
T ss_pred ccCCCCCCCcchHHHHHHHHHHHHHHHHhc-cC-cEEEEEECCccccchhhhC--CHHHHHHHHhcCCCCCCcCHHHHHh
Confidence 765 4678999999999999999999997 65 9999999999999865432 4556667777889999999999999
Q ss_pred HHHHhcCCCCCCccccEEEeCCCCCC
Q 022386 239 AALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 239 ~~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
+++||+++.+.++||+.|.+|||.++
T Consensus 241 ~~~~l~s~~~~~itG~~i~vdgG~~~ 266 (267)
T 3gdg_A 241 AYVYFASDASTYTTGADLLIDGGYTT 266 (267)
T ss_dssp HHHHHHSTTCTTCCSCEEEESTTGGG
T ss_pred HhheeecCccccccCCEEEECCceec
Confidence 99999999999999999999999875
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-46 Score=318.46 Aligned_cols=246 Identities=32% Similarity=0.411 Sum_probs=224.5
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEE-cCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.+|++|+++||||++|||++++++|+++|++|+++ .|+.+..++..+++.+.+.++.++.+|+++.++++++++.+.+.
T Consensus 3 ~~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (255)
T 3icc_A 3 SMLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNE 82 (255)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHH
Confidence 46889999999999999999999999999999885 77788888888888888888999999999999999999999887
Q ss_pred hC------CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc
Q 022386 87 FG------KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 160 (298)
Q Consensus 87 ~~------~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~ 160 (298)
++ ++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|++ .++||++||..+.
T Consensus 83 ~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~----------~~~iv~isS~~~~ 152 (255)
T 3icc_A 83 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD----------NSRIINISSAATR 152 (255)
T ss_dssp HHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE----------EEEEEEECCGGGT
T ss_pred hcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC----------CCEEEEeCChhhc
Confidence 74 4999999999887778888899999999999999999999999999943 4889999999999
Q ss_pred cCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHH
Q 022386 161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240 (298)
Q Consensus 161 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 240 (298)
.+.+....|++||++++.|+++++.|++ ++||+||+|+||+++|++.......+..........+.+++.+|+|+|+++
T Consensus 153 ~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 231 (255)
T 3icc_A 153 ISLPDFIAYSMTKGAINTMTFTLAKQLG-ARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTA 231 (255)
T ss_dssp SCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTTSSCBCHHHHHHHH
T ss_pred cCCCCcchhHHhHHHHHHHHHHHHHHHH-hcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCcCCCCCHHHHHHHH
Confidence 9999999999999999999999999998 779999999999999998766655566666777778899999999999999
Q ss_pred HHhcCCCCCCccccEEEeCCCCCC
Q 022386 241 LYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 241 ~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
.||+++.+.+++|+.|.+|||.++
T Consensus 232 ~~l~s~~~~~~tG~~i~vdgG~~l 255 (255)
T 3icc_A 232 AFLASPDSRWVTGQLIDVSGGSCL 255 (255)
T ss_dssp HHHHSGGGTTCCSCEEEESSSTTC
T ss_pred HHHhCcccCCccCCEEEecCCeeC
Confidence 999999999999999999999764
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-45 Score=316.52 Aligned_cols=247 Identities=26% Similarity=0.300 Sum_probs=220.1
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEE-EcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
+.+.++.+|++|||||++|||+++|++|+++|++|++ ..|+.+..++..+++.+.+.++.++.||++|+++++++++++
T Consensus 19 ~~~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 98 (267)
T 4iiu_A 19 YFQSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHE 98 (267)
T ss_dssp ------CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred hhccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 4455788999999999999999999999999999866 567777888888888888889999999999999999999999
Q ss_pred HHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
.+.++++|++|||||.....++.+.+.++|++.+++|+.+++++++.+++.|.+... .|+||++||..+..+.
T Consensus 99 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~ 171 (267)
T 4iiu_A 99 IAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQ-------GGRIITLSSVSGVMGN 171 (267)
T ss_dssp HHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-------CEEEEEECCHHHHHCC
T ss_pred HHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-------CcEEEEEcchHhccCC
Confidence 999999999999999887788888899999999999999999999999998863321 6899999999999999
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHh
Q 022386 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (298)
Q Consensus 164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L 243 (298)
+....|++||+|++.|+++++.|++ ++||+||+|+||+++|++.... ++.........+.+++.+|+|+|+++.||
T Consensus 172 ~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~p~~~~~~~edva~~~~~L 247 (267)
T 4iiu_A 172 RGQVNYSAAKAGIIGATKALAIELA-KRKITVNCIAPGLIDTGMIEME---ESALKEAMSMIPMKRMGQAEEVAGLASYL 247 (267)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSTTCCCC---HHHHHHHHHTCTTCSCBCHHHHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHh-hcCeEEEEEEEeeecCCccccc---HHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 9999999999999999999999998 7899999999999999865433 45556667778999999999999999999
Q ss_pred cCCCCCCccccEEEeCCCC
Q 022386 244 ASDAGKYVNGNTLIVDGGN 262 (298)
Q Consensus 244 ~s~~~~~~~G~~i~~dgG~ 262 (298)
+++.+.++||+.|.+|||.
T Consensus 248 ~s~~~~~itG~~i~vdGG~ 266 (267)
T 4iiu_A 248 MSDIAGYVTRQVISINGGM 266 (267)
T ss_dssp HSGGGTTCCSCEEEESTTC
T ss_pred hCCcccCccCCEEEeCCCc
Confidence 9999999999999999995
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-45 Score=316.09 Aligned_cols=244 Identities=31% Similarity=0.434 Sum_probs=212.8
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
|++|++|+++||||++|||++++++|+++|++|++++|+.+. ++..+++. + .+++||++|+++++++++++.+.
T Consensus 1 M~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~~ 74 (256)
T 2d1y_A 1 MGLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG----G-AFFQVDLEDERERVRFVEEAAYA 74 (256)
T ss_dssp -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT----C-EEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh----C-CEEEeeCCCHHHHHHHHHHHHHH
Confidence 356889999999999999999999999999999999999876 65555553 4 78899999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
++++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+..+.+..
T Consensus 75 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~--------~g~iv~isS~~~~~~~~~~ 146 (256)
T 2d1y_A 75 LGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG--------GGAIVNVASVQGLFAEQEN 146 (256)
T ss_dssp HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT--------CEEEEEECCGGGTSBCTTB
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--------CcEEEEEccccccCCCCCC
Confidence 99999999999987777888899999999999999999999999999998765 6899999999999888899
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc----CChHHHHHHHhhhccCCCCCCHHHHHHHHHH
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK----LAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 242 (298)
..|++||++++.++++++.|++ ++||+||+|+||+++|++.... ...++....+....+.+++.+|+|+|++++|
T Consensus 147 ~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~ 225 (256)
T 2d1y_A 147 AAYNASKGGLVNLTRSLALDLA-PLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLF 225 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 9999999999999999999998 7899999999999998754321 1012222334455678889999999999999
Q ss_pred hcCCCCCCccccEEEeCCCCCCC
Q 022386 243 LASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 243 L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
|+++.+.+++|+.+.+|||..+.
T Consensus 226 l~s~~~~~~~G~~~~v~gG~~~~ 248 (256)
T 2d1y_A 226 LASEKASFITGAILPVDGGMTAS 248 (256)
T ss_dssp HHSGGGTTCCSCEEEESTTGGGB
T ss_pred HhCchhcCCCCCEEEECCCcccc
Confidence 99998889999999999998764
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-45 Score=320.63 Aligned_cols=248 Identities=24% Similarity=0.368 Sum_probs=218.8
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCC---CeEEEEccCCCHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGI---PAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
.+|++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+. ++.++.||++|+++++++++++.
T Consensus 2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (280)
T 1xkq_A 2 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL 81 (280)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHH
Confidence 458899999999999999999999999999999999999888888888876655 78999999999999999999999
Q ss_pred HHhCCccEEEECCCCCCCCC----CCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc
Q 022386 85 NHFGKLDILVNAAAGNFLVP----AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 160 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~ 160 (298)
+.++++|++|||||+....+ +.+.+.++|++.+++|+.++++++++++|.|.++ +|+||++||..+.
T Consensus 82 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~---------~g~iv~isS~~~~ 152 (280)
T 1xkq_A 82 KQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS---------KGEIVNVSSIVAG 152 (280)
T ss_dssp HHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---------TCEEEEECCGGGS
T ss_pred HhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcC---------CCcEEEecCcccc
Confidence 99999999999999876555 6778899999999999999999999999999865 3789999999998
Q ss_pred cCC-CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC-Ch------HHHHHHHhhhccCCCCCC
Q 022386 161 TAT-WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-AP------EEIRSKATDYMAAYKFGE 232 (298)
Q Consensus 161 ~~~-~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~-~~------~~~~~~~~~~~~~~~~~~ 232 (298)
.+. +....|++||++++.|+++++.|++ ++||+||+|+||+++|++..... .. ++.........|.+++.+
T Consensus 153 ~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 231 (280)
T 1xkq_A 153 PQAQPDFLYYAIAKAALDQYTRSTAIDLA-KFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGK 231 (280)
T ss_dssp SSCCCSSHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBC
T ss_pred CCCCCcccHHHHHHHHHHHHHHHHHHHhc-cCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCCCCCC
Confidence 887 8889999999999999999999998 88999999999999998644321 11 122333344567889999
Q ss_pred HHHHHHHHHHhcCCC-CCCccccEEEeCCCCCCC
Q 022386 233 KWDIAMAALYLASDA-GKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 233 ~~dva~~~~~L~s~~-~~~~~G~~i~~dgG~~~~ 265 (298)
|+|+|+.++||+++. +.+++|+.|.+|||..+.
T Consensus 232 pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~~~~ 265 (280)
T 1xkq_A 232 PEHIANIILFLADRNLSFYILGQSIVADGGTSLV 265 (280)
T ss_dssp HHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred HHHHHHHHHHhcCcccccCccCCeEEECCCcccc
Confidence 999999999999987 889999999999998764
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-45 Score=323.30 Aligned_cols=250 Identities=24% Similarity=0.354 Sum_probs=219.4
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCC---CeEEEEccCCCHHHHHHHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGI---PAIGLEGDVRKREDAVRVVES 82 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~---~~~~~~~Dls~~~~~~~~~~~ 82 (298)
.|++|++|++|||||++|||+++++.|+++|++|++++|+.+.+++..+++.+.+. ++.++.||++|++++++++++
T Consensus 20 ~m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 99 (297)
T 1xhl_A 20 HMARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINT 99 (297)
T ss_dssp ---CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHH
Confidence 34568999999999999999999999999999999999999888888888877665 789999999999999999999
Q ss_pred HHHHhCCccEEEECCCCCCCCC--CCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc
Q 022386 83 TINHFGKLDILVNAAAGNFLVP--AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 160 (298)
Q Consensus 83 ~~~~~~~id~li~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~ 160 (298)
+.+.++++|++|||||+....+ +.+.+.++|++.+++|+.++++++++++|.|.++ +|+||++||..+.
T Consensus 100 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~---------~g~IV~isS~~~~ 170 (297)
T 1xhl_A 100 TLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKT---------KGEIVNVSSIVAG 170 (297)
T ss_dssp HHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT---------TCEEEEECCGGGS
T ss_pred HHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc---------CCEEEEEcCchhc
Confidence 9999999999999999876666 7788999999999999999999999999999875 3889999999998
Q ss_pred cCC-CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC-Ch------HHHHHHHhhhccCCCCCC
Q 022386 161 TAT-WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-AP------EEIRSKATDYMAAYKFGE 232 (298)
Q Consensus 161 ~~~-~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~-~~------~~~~~~~~~~~~~~~~~~ 232 (298)
.+. +....|++||++++.|+++++.|++ ++||+||+|+||+++|++..... .. ++.........|.+++.+
T Consensus 171 ~~~~~~~~~Y~asKaa~~~l~~~la~el~-~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~ 249 (297)
T 1xhl_A 171 PQAHSGYPYYACAKAALDQYTRCTAIDLI-QHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGK 249 (297)
T ss_dssp SSCCTTSHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBC
T ss_pred cCCCCCcchHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCCCcC
Confidence 887 8889999999999999999999998 78999999999999998654321 11 122233344567889999
Q ss_pred HHHHHHHHHHhcCCC-CCCccccEEEeCCCCCCC
Q 022386 233 KWDIAMAALYLASDA-GKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 233 ~~dva~~~~~L~s~~-~~~~~G~~i~~dgG~~~~ 265 (298)
|+|+|+.++||+++. +.+++|+.|.+|||..+.
T Consensus 250 pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~ 283 (297)
T 1xhl_A 250 PEEIANIIVFLADRNLSSYIIGQSIVADGGSTLV 283 (297)
T ss_dssp HHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred HHHHHHHHHHHhCCcccCCccCcEEEECCCcccc
Confidence 999999999999987 889999999999998764
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-45 Score=318.59 Aligned_cols=250 Identities=24% Similarity=0.313 Sum_probs=212.3
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcC-ChhHHHHHHHHHHhC-CCCeEEEEccCCCH----HHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSL-GIPAIGLEGDVRKR----EDAVRVVE 81 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~Dls~~----~~~~~~~~ 81 (298)
.+|++|++|||||++|||++++++|+++|++|++++| +.+.++++.+++.+. +.++.++.||++|. ++++++++
T Consensus 7 ~~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 86 (276)
T 1mxh_A 7 EASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIID 86 (276)
T ss_dssp ----CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHH
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHH
Confidence 4578999999999999999999999999999999999 888888888888665 67899999999999 99999999
Q ss_pred HHHHHhCCccEEEECCCCCCCCCCCCCCH-----------HHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcE
Q 022386 82 STINHFGKLDILVNAAAGNFLVPAEDLSP-----------NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGI 150 (298)
Q Consensus 82 ~~~~~~~~id~li~~ag~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~ 150 (298)
++.+.++++|++|||||+....++.+.+. ++|++.+++|+.++++++++++|+|. ++. .....+|+
T Consensus 87 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~--~~~~~~g~ 163 (276)
T 1mxh_A 87 CSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGG--AWRSRNLS 163 (276)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC----------CCCEE
T ss_pred HHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCC--CCCCCCcE
Confidence 99999999999999999877777777788 99999999999999999999999987 320 00111389
Q ss_pred EEEecccccccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCC-
Q 022386 151 IINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK- 229 (298)
Q Consensus 151 iv~vss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~- 229 (298)
||++||..+..+.+....|++||++++.|+++++.|++ ++||+||+|+||+++|+ . .. .++....+....+.++
T Consensus 164 iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~-~~gi~v~~v~PG~v~t~-~--~~-~~~~~~~~~~~~p~~r~ 238 (276)
T 1mxh_A 164 VVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELA-PRHIRVNAVAPGLSLLP-P--AM-PQETQEEYRRKVPLGQS 238 (276)
T ss_dssp EEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBSCC-S--SS-CHHHHHHHHTTCTTTSC
T ss_pred EEEECchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCcccCC-c--cC-CHHHHHHHHhcCCCCCC
Confidence 99999999999989999999999999999999999998 78999999999999988 2 22 2344444555678888
Q ss_pred CCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 230 FGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 230 ~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
+.+|+|+|++++||+++.+.+++|+.|.+|||..+.
T Consensus 239 ~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~ 274 (276)
T 1mxh_A 239 EASAAQIADAIAFLVSKDAGYITGTTLKVDGGLILA 274 (276)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred CCCHHHHHHHHHHHhCccccCccCcEEEECCchhcc
Confidence 999999999999999998899999999999997653
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-45 Score=315.26 Aligned_cols=245 Identities=27% Similarity=0.348 Sum_probs=214.9
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
+|++|++|||||++|||++++++|+++|++|++++|+.+ ++..+++...+.++.++.+|++|+++++++++++.+.++
T Consensus 1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 78 (255)
T 2q2v_A 1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFG 78 (255)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 478999999999999999999999999999999999876 455666766677899999999999999999999999999
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchh
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~ 168 (298)
++|++|||||+....++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+..+.+....
T Consensus 79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~ 150 (255)
T 2q2v_A 79 GVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARN--------WGRIINIASVHGLVGSTGKAA 150 (255)
T ss_dssp SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--------CEEEEEECCGGGTSCCTTBHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--------CcEEEEEcCchhccCCCCchh
Confidence 999999999987767778889999999999999999999999999998865 689999999999988888999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC-hHHH---H----HHH-hhhccCCCCCCHHHHHHH
Q 022386 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEI---R----SKA-TDYMAAYKFGEKWDIAMA 239 (298)
Q Consensus 169 Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~-~~~~---~----~~~-~~~~~~~~~~~~~dva~~ 239 (298)
|++||++++.++++++.|++ ++||+||+|+||+++|++...... .++. . ..+ ....+.+++.+|+|+|++
T Consensus 151 Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~ 229 (255)
T 2q2v_A 151 YVAAKHGVVGLTKVVGLETA-TSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGEL 229 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-TSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhc-ccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHHHHHHH
Confidence 99999999999999999998 789999999999999876432110 0111 1 222 445678899999999999
Q ss_pred HHHhcCCCCCCccccEEEeCCCCCC
Q 022386 240 ALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 240 ~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
++||+++.+.+++|+.|.+|||..+
T Consensus 230 ~~~l~s~~~~~~tG~~~~vdgG~~~ 254 (255)
T 2q2v_A 230 VLFLCSEAGSQVRGAAWNVDGGWLA 254 (255)
T ss_dssp HHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred HHHHhCCccCCCCCCEEEECCCccC
Confidence 9999999889999999999999754
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-46 Score=318.64 Aligned_cols=243 Identities=28% Similarity=0.413 Sum_probs=211.7
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
.+|++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++ ..++.++.||++|+++++++++++.+.+
T Consensus 2 ~~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (263)
T 2a4k_A 2 GRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL---EAEAIAVVADVSDPKAVEAVFAEALEEF 78 (263)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC---CSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4688999999999999999999999999999999999987766655544 3568899999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
+++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+| ++ .|+||++||..+. +.+...
T Consensus 79 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~---------~g~iv~isS~~~~-~~~~~~ 147 (263)
T 2a4k_A 79 GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE---------GGSLVLTGSVAGL-GAFGLA 147 (263)
T ss_dssp SCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT---------TCEEEEECCCTTC-CHHHHH
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc---------CCEEEEEecchhc-CCCCcH
Confidence 999999999998777788888999999999999999999999999999 43 4889999999988 777788
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~ 247 (298)
.|++||++++.++++++.|++ ++||+||+|+||+++|++.... .++.........|.+++.+|+|+|+.++||+++.
T Consensus 148 ~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~ 224 (263)
T 2a4k_A 148 HYAAGKLGVVGLARTLALELA-RKGVRVNVLLPGLIQTPMTAGL--PPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEE 224 (263)
T ss_dssp HHHHCSSHHHHHHHHHHHHHT-TTTCEEEEEEECSBCCGGGTTS--CHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHHHHHhh-hhCcEEEEEEeCcCcCchhhhc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence 999999999999999999998 7899999999999999865432 2344445556678889999999999999999998
Q ss_pred CCCccccEEEeCCCCCCCCC
Q 022386 248 GKYVNGNTLIVDGGNWLSNP 267 (298)
Q Consensus 248 ~~~~~G~~i~~dgG~~~~~~ 267 (298)
+.+++|+.+.+|||..+..+
T Consensus 225 ~~~~tG~~i~vdgG~~~~~~ 244 (263)
T 2a4k_A 225 SAYITGQALYVDGGRSIVGP 244 (263)
T ss_dssp GTTCCSCEEEESTTTTTC--
T ss_pred ccCCcCCEEEECCCccccCC
Confidence 89999999999999877543
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-46 Score=319.72 Aligned_cols=251 Identities=22% Similarity=0.180 Sum_probs=216.5
Q ss_pred CCCCCCCCCcEEEEecCC--chhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHH
Q 022386 4 PFKGDILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVE 81 (298)
Q Consensus 4 ~~~~~~l~gk~~lVtG~t--~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~ 81 (298)
+.....+++|++|||||+ +|||+++|++|+++|++|++++|+.... +..+++.+..+++.++.||++|+++++++++
T Consensus 6 ~~~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 84 (271)
T 3ek2_A 6 HHHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFK-DRITEFAAEFGSELVFPCDVADDAQIDALFA 84 (271)
T ss_dssp ---CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHHHHHTTCCCEEECCTTCHHHHHHHHH
T ss_pred CCCccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhH-HHHHHHHHHcCCcEEEECCCCCHHHHHHHHH
Confidence 355678999999999999 9999999999999999999999985433 3444444444568899999999999999999
Q ss_pred HHHHHhCCccEEEECCCCCCC----CCCCC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecc
Q 022386 82 STINHFGKLDILVNAAAGNFL----VPAED-LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISA 156 (298)
Q Consensus 82 ~~~~~~~~id~li~~ag~~~~----~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss 156 (298)
++.+.++++|++|||||+... .++.+ .+.++|++.+++|+.++++++++++|+|++ .|+||++||
T Consensus 85 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~----------~g~iv~isS 154 (271)
T 3ek2_A 85 SLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD----------DASLLTLSY 154 (271)
T ss_dssp HHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE----------EEEEEEEEC
T ss_pred HHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc----------CceEEEEec
Confidence 999999999999999998654 55565 899999999999999999999999999974 488999999
Q ss_pred cccccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHH
Q 022386 157 TLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236 (298)
Q Consensus 157 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv 236 (298)
..+..+.+....|++||+|++.|+++++.|++ ++||+||+|+||+++|++.......++.........+.+++.+|+|+
T Consensus 155 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pedv 233 (271)
T 3ek2_A 155 LGAERAIPNYNTMGLAKAALEASVRYLAVSLG-AKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQV 233 (271)
T ss_dssp GGGTSBCTTTTHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTTSSCCCHHHH
T ss_pred cccccCCCCccchhHHHHHHHHHHHHHHHHHH-hcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCcCCCCCHHHH
Confidence 99999999999999999999999999999998 88999999999999998765543345666777788899999999999
Q ss_pred HHHHHHhcCCCCCCccccEEEeCCCCCCCC
Q 022386 237 AMAALYLASDAGKYVNGNTLIVDGGNWLSN 266 (298)
Q Consensus 237 a~~~~~L~s~~~~~~~G~~i~~dgG~~~~~ 266 (298)
|+.++||+++.+.++||+.|.+|||.++..
T Consensus 234 a~~i~~l~s~~~~~~tG~~i~vdgG~~~~~ 263 (271)
T 3ek2_A 234 GNAGAFLLSDLASGVTAEVMHVDSGFNAVV 263 (271)
T ss_dssp HHHHHHHHSGGGTTCCSEEEEESTTGGGBC
T ss_pred HHHHHHHcCcccCCeeeeEEEECCCeeeeh
Confidence 999999999999999999999999998864
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-45 Score=323.14 Aligned_cols=252 Identities=22% Similarity=0.293 Sum_probs=218.1
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEc-CChhHHHHHHHHHH-hCCCCeEEEEccCCCHH----------
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMG-RRKTVLRSAVAALH-SLGIPAIGLEGDVRKRE---------- 74 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~-r~~~~~~~~~~~~~-~~~~~~~~~~~Dls~~~---------- 74 (298)
|.+|++|++|||||++|||+++++.|+++|++|++++ |+.+.++++.+++. ..+.++.++.||++|++
T Consensus 41 m~~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 120 (328)
T 2qhx_A 41 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGS 120 (328)
T ss_dssp ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------
T ss_pred ccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccc
Confidence 4458999999999999999999999999999999999 99888888888886 55678999999999999
Q ss_pred -------HHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCC--------------HHHHHHHHHhhhHHHHHHHHHHHH
Q 022386 75 -------DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS--------------PNGFRTVIEIDSVGTFIMCHEALK 133 (298)
Q Consensus 75 -------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~ 133 (298)
+++++++++.+.++++|+||||||+....++.+.+ .++|++.+++|+.++++++++++|
T Consensus 121 ~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 200 (328)
T 2qhx_A 121 APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAH 200 (328)
T ss_dssp CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999987777777778 899999999999999999999999
Q ss_pred HHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC
Q 022386 134 YLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA 213 (298)
Q Consensus 134 ~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~ 213 (298)
.|.+++.. .....|+||++||..+..+.+....|++||++++.|++.++.|++ ++||+||+|+||+++|++ ...
T Consensus 201 ~m~~~~~~--~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrvn~v~PG~v~T~~--~~~- 274 (328)
T 2qhx_A 201 RVAGTPAK--HRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELA-PLQIRVNGVGPGLSVLVD--DMP- 274 (328)
T ss_dssp HHHHSCGG--GSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBSCCC--CSC-
T ss_pred HHHhcCCc--CCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHh-hcCcEEEEEecCcccCCc--ccc-
Confidence 99875310 001148999999999999988999999999999999999999998 789999999999999987 222
Q ss_pred hHHHHHHHhhhccCC-CCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 214 PEEIRSKATDYMAAY-KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 214 ~~~~~~~~~~~~~~~-~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
++....+....|.+ ++.+|+|+|++++||+++.+.++||+.|.+|||..+.
T Consensus 275 -~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~ 326 (328)
T 2qhx_A 275 -PAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT 326 (328)
T ss_dssp -HHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred -HHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCcccC
Confidence 34444555667887 8999999999999999998999999999999998764
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-45 Score=318.23 Aligned_cols=245 Identities=31% Similarity=0.465 Sum_probs=215.5
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhH-HHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.+|+||++|||||++|||++++++|+++|++|++++|+.+. .++..+++.+.+.++.++.||+++.++++++++++.+.
T Consensus 25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 104 (283)
T 1g0o_A 25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI 104 (283)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999998654 56666777777788999999999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC-
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY- 165 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~- 165 (298)
++++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|. + .|+||++||..+..+.+.
T Consensus 105 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~--------~g~iv~isS~~~~~~~~~~ 174 (283)
T 1g0o_A 105 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE--I--------GGRLILMGSITGQAKAVPK 174 (283)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC--T--------TCEEEEECCGGGTCSSCSS
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh--c--------CCeEEEEechhhccCCCCC
Confidence 99999999999987777788889999999999999999999999999993 2 589999999998877664
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC----C-----hHHHHHHHhh--hccCCCCCCHH
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL----A-----PEEIRSKATD--YMAAYKFGEKW 234 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~----~-----~~~~~~~~~~--~~~~~~~~~~~ 234 (298)
...|++||++++.|+++++.|++ ++||+||+|+||+++|++..... . .++....+.. ..+.+++.+|+
T Consensus 175 ~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~ 253 (283)
T 1g0o_A 175 HAVYSGSKGAIETFARCMAIDMA-DKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPI 253 (283)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHH
T ss_pred CcchHHHHHHHHHHHHHHHHHhc-ccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCCCcCHH
Confidence 88999999999999999999998 78999999999999987543210 0 2333344444 67889999999
Q ss_pred HHHHHHHHhcCCCCCCccccEEEeCCCCC
Q 022386 235 DIAMAALYLASDAGKYVNGNTLIVDGGNW 263 (298)
Q Consensus 235 dva~~~~~L~s~~~~~~~G~~i~~dgG~~ 263 (298)
|+|+.++||+++.++++||+.|.+|||.+
T Consensus 254 dvA~~v~~l~s~~~~~itG~~i~vdgG~~ 282 (283)
T 1g0o_A 254 DIARVVCFLASNDGGWVTGKVIGIDGGAC 282 (283)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred HHHHHHHHHhCccccCcCCCEEEeCCCcc
Confidence 99999999999989999999999999965
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-45 Score=315.70 Aligned_cols=249 Identities=22% Similarity=0.323 Sum_probs=218.4
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
|.+.+|++|++|||||++|||+++++.|+++|++|++++|+.+. +.++.++.+|++|+++++++++++.
T Consensus 1 m~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----------~~~~~~~~~Dl~~~~~v~~~~~~~~ 69 (264)
T 2dtx_A 1 MGFSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----------EAKYDHIECDVTNPDQVKASIDHIF 69 (264)
T ss_dssp -CCGGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----------SCSSEEEECCTTCHHHHHHHHHHHH
T ss_pred CCccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----------CCceEEEEecCCCHHHHHHHHHHHH
Confidence 45667899999999999999999999999999999999998653 4568899999999999999999999
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~ 164 (298)
+.++++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+..+.+
T Consensus 70 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~ 141 (264)
T 2dtx_A 70 KEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSR--------DPSIVNISSVQASIITK 141 (264)
T ss_dssp HHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS--------SCEEEEECCGGGTSCCT
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--------CcEEEEECCchhccCCC
Confidence 9999999999999987777888899999999999999999999999999998765 68999999999998888
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC-----ChH----HHHHHHhhhccCCCCCCHHH
Q 022386 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-----APE----EIRSKATDYMAAYKFGEKWD 235 (298)
Q Consensus 165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~-----~~~----~~~~~~~~~~~~~~~~~~~d 235 (298)
....|++||++++.|+++++.|++ +. |+||+|+||+++|++..... ..+ +....+....+.+++.+|+|
T Consensus 142 ~~~~Y~~sK~a~~~~~~~la~e~~-~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~d 219 (264)
T 2dtx_A 142 NASAYVTSKHAVIGLTKSIALDYA-PL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQE 219 (264)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHT-TT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCBCHHH
T ss_pred CchhHHHHHHHHHHHHHHHHHHhc-CC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCcCHHH
Confidence 999999999999999999999997 76 99999999999987543210 012 33344445568889999999
Q ss_pred HHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhH
Q 022386 236 IAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEA 274 (298)
Q Consensus 236 va~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~ 274 (298)
+|++++||+++.+.+++|+.|.+|||..+..|...+++-
T Consensus 220 vA~~v~~l~s~~~~~~tG~~i~vdGG~~~~~p~~~~~~~ 258 (264)
T 2dtx_A 220 VASAVAFLASREASFITGTCLYVDGGLSIRAPISTPELE 258 (264)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTGGGCCCCCCCC--
T ss_pred HHHHHHHHhCchhcCCCCcEEEECCCcccCCCCCCcchh
Confidence 999999999998899999999999999988777766654
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-46 Score=324.17 Aligned_cols=245 Identities=22% Similarity=0.223 Sum_probs=216.7
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCC---cEEEEcCChhHHHHHHHHHHhC--CCCeEEEEccCCCHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGA---AIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVES 82 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~---~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~ 82 (298)
.+|+||++|||||++|||+++|++|+++|+ +|++++|+.+.++++.+++... +.++.++.||++|++++++++++
T Consensus 29 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 108 (287)
T 3rku_A 29 ERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIEN 108 (287)
T ss_dssp HHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHT
T ss_pred hhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 468999999999999999999999999998 9999999999999998888764 56789999999999999999999
Q ss_pred HHHHhCCccEEEECCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc
Q 022386 83 TINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 161 (298)
Q Consensus 83 ~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~ 161 (298)
+.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|+|++++ .|+||++||..+..
T Consensus 109 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~--------~g~IV~isS~~~~~ 180 (287)
T 3rku_A 109 LPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKN--------SGDIVNLGSIAGRD 180 (287)
T ss_dssp SCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CCEEEEECCGGGTS
T ss_pred HHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------CCeEEEECChhhcC
Confidence 9999999999999999765 57788899999999999999999999999999998876 68999999999999
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC--ChHHHHHHHhhhccCCCCCCHHHHHHH
Q 022386 162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL--APEEIRSKATDYMAAYKFGEKWDIAMA 239 (298)
Q Consensus 162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (298)
+.+....|++||+|++.|+++++.|++ ++||+||+|+||+++|++..... ..+........ ....+|+|+|++
T Consensus 181 ~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~----~~p~~pedvA~~ 255 (287)
T 3rku_A 181 AYPTGSIYCASKFAVGAFTDSLRKELI-NTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKD----TTPLMADDVADL 255 (287)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHTT-TSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTT----SCCEEHHHHHHH
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHhh-hcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcc----cCCCCHHHHHHH
Confidence 999999999999999999999999998 88999999999999998643222 11222222222 234489999999
Q ss_pred HHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 240 ALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 240 ~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
++||+++.+.+++|+.+.+|+|....
T Consensus 256 v~~l~s~~~~~i~g~~i~v~~g~~~p 281 (287)
T 3rku_A 256 IVYATSRKQNTVIADTLIFPTNQASP 281 (287)
T ss_dssp HHHHHTSCTTEEEEEEEEEETTEEET
T ss_pred HHHHhCCCCCeEecceEEeeCCCCCC
Confidence 99999999999999999999997763
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-46 Score=316.88 Aligned_cols=243 Identities=31% Similarity=0.336 Sum_probs=213.1
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
+|++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++ +.++.++.+|++++++++++++++.+.++
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (254)
T 1hdc_A 2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEFG 78 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 578999999999999999999999999999999999987776665554 45688999999999999999999999999
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchh
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~ 168 (298)
++|++|||||+....++.+.+.++|++.+++|+.+++++++.++|.|++++ .|+||++||..+..+.+....
T Consensus 79 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~ 150 (254)
T 1hdc_A 79 SVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG--------GGSIVNISSAAGLMGLALTSS 150 (254)
T ss_dssp CCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCTTCHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--------CCEEEEECchhhccCCCCchh
Confidence 999999999987777778889999999999999999999999999998865 689999999999988889999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCC-CHHHHHHHHHHhcCCC
Q 022386 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG-EKWDIAMAALYLASDA 247 (298)
Q Consensus 169 Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dva~~~~~L~s~~ 247 (298)
|++||++++.|+++++.|++ ++||+||+|+||+++|++..... ++.........|.+++. +|+|+|+.++||+++.
T Consensus 151 Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~p~~~~~~~~~dvA~~v~~l~s~~ 227 (254)
T 1hdc_A 151 YGASKWGVRGLSKLAAVELG-TDRIRVNSVHPGMTYTPMTAETG--IRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDT 227 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHHHT--CCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecccCcCccccccc--hhHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCch
Confidence 99999999999999999998 78999999999999987532210 01111122335677888 9999999999999998
Q ss_pred CCCccccEEEeCCCCCCC
Q 022386 248 GKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 248 ~~~~~G~~i~~dgG~~~~ 265 (298)
+.+++|+.+.+|||..+.
T Consensus 228 ~~~~tG~~~~vdgG~~~~ 245 (254)
T 1hdc_A 228 SSYVTGAELAVDGGWTTG 245 (254)
T ss_dssp GTTCCSCEEEESTTTTTS
T ss_pred hcCCCCCEEEECCCcccc
Confidence 899999999999997763
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-45 Score=316.63 Aligned_cols=253 Identities=25% Similarity=0.344 Sum_probs=213.9
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh-hHHHHHHHHHH-hCCCCeEEEEccCCC----HHHHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALH-SLGIPAIGLEGDVRK----REDAVRV 79 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~-~~~~~~~~~~~-~~~~~~~~~~~Dls~----~~~~~~~ 79 (298)
...+|+||++|||||++|||+++++.|+++|++|++++|+. +.++++.+++. ..+.++.++.||+++ +++++++
T Consensus 17 ~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~ 96 (288)
T 2x9g_A 17 RGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEI 96 (288)
T ss_dssp -----CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHH
T ss_pred CCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHH
Confidence 34468899999999999999999999999999999999998 78888888886 557789999999999 9999999
Q ss_pred HHHHHHHhCCccEEEECCCCCCCCCC-----CC-----CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCc
Q 022386 80 VESTINHFGKLDILVNAAAGNFLVPA-----ED-----LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGG 149 (298)
Q Consensus 80 ~~~~~~~~~~id~li~~ag~~~~~~~-----~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g 149 (298)
++++.+.++++|+||||||+....++ .+ .+.++|++.+++|+.++++++++++|.|.+++. ......|
T Consensus 97 ~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--~~~~~~g 174 (288)
T 2x9g_A 97 INSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNP--NCTSSNL 174 (288)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC----------CCCE
T ss_pred HHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCC--CCCCCCe
Confidence 99999999999999999998766666 56 788999999999999999999999999976431 0011148
Q ss_pred EEEEecccccccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCC
Q 022386 150 IIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK 229 (298)
Q Consensus 150 ~iv~vss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~ 229 (298)
+||++||..+..+.+....|++||+++..|+++++.|++ ++||+||+|+||+++|++ . .. ++....+....+.++
T Consensus 175 ~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~t~~-~--~~-~~~~~~~~~~~p~~r 249 (288)
T 2x9g_A 175 SIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELA-PYGIRVNGVAPGVSLLPV-A--MG-EEEKDKWRRKVPLGR 249 (288)
T ss_dssp EEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSCSCCT-T--SC-HHHHHHHHHTCTTTS
T ss_pred EEEEEecccccCCCCCCchHHHHHHHHHHHHHHHHHHhh-ccCeEEEEEEeccccCcc-c--cC-hHHHHHHHhhCCCCC
Confidence 999999999999989999999999999999999999998 789999999999999987 3 22 223344455578888
Q ss_pred C-CCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 230 F-GEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 230 ~-~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
+ .+|+|+|+.++||+++.+.++||+.|.+|||..+.
T Consensus 250 ~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~ 286 (288)
T 2x9g_A 250 REASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLV 286 (288)
T ss_dssp SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred CCCCHHHHHHHHHHHhCccccCccCCEEEECcchhhh
Confidence 8 99999999999999998999999999999997653
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-45 Score=314.36 Aligned_cols=249 Identities=28% Similarity=0.391 Sum_probs=216.0
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
..+.+|++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++. .++.+++||++|+++++++++++.
T Consensus 5 ~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~d~~~v~~~~~~~~ 81 (263)
T 3ak4_A 5 AGIFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE---NGGFAVEVDVTKRASVDAAMQKAI 81 (263)
T ss_dssp -CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCT---TCCEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh---cCCeEEEEeCCCHHHHHHHHHHHH
Confidence 34556899999999999999999999999999999999999877666554442 267889999999999999999999
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~ 164 (298)
+.++++|++|||||.....++.+.+.++|++.+++|+.++++++++++|+|.+++. .|+||++||..+..+.+
T Consensus 82 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~ 154 (263)
T 3ak4_A 82 DALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNT-------KGVIVNTASLAAKVGAP 154 (263)
T ss_dssp HHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC-------CCEEEEECCGGGTSCCT
T ss_pred HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-------CeEEEEecccccccCCC
Confidence 99999999999999877777788899999999999999999999999999987531 38899999999988888
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC---------ChHHHHHHHhhhccCCCCCCHHH
Q 022386 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---------APEEIRSKATDYMAAYKFGEKWD 235 (298)
Q Consensus 165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~d 235 (298)
....|++||++++.++++++.|++ ++||+||+|+||+++|++..... ..++....+....|.+++.+|+|
T Consensus 155 ~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d 233 (263)
T 3ak4_A 155 LLAHYSASKFAVFGWTQALAREMA-PKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPED 233 (263)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHHH
T ss_pred CchhHHHHHHHHHHHHHHHHHHHh-HcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHHH
Confidence 899999999999999999999998 78999999999999987543211 01233344455678889999999
Q ss_pred HHHHHHHhcCCCCCCccccEEEeCCCCCC
Q 022386 236 IAMAALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 236 va~~~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
+|++++||+++.+++++|+.|.+|||..+
T Consensus 234 vA~~v~~l~s~~~~~~tG~~~~vdgG~~~ 262 (263)
T 3ak4_A 234 VADVVVFLASDAARFMTGQGINVTGGVRM 262 (263)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESSSSSC
T ss_pred HHHHHHHHhCccccCCCCCEEEECcCEeC
Confidence 99999999999889999999999999754
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-45 Score=314.05 Aligned_cols=247 Identities=23% Similarity=0.296 Sum_probs=208.7
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhH-HHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
++.+|+++||||++|||++++++|+++|++|++++|+... .+...+.+...+.++.++.||++|+++++++++++.+.+
T Consensus 4 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 83 (264)
T 3i4f_A 4 GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHF 83 (264)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred ccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 4567999999999999999999999999999999776544 444555555556789999999999999999999999999
Q ss_pred CCccEEEECCC--CCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccc-cc-ccCC
Q 022386 88 GKLDILVNAAA--GNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT-LH-YTAT 163 (298)
Q Consensus 88 ~~id~li~~ag--~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~-~~-~~~~ 163 (298)
+++|++||||| .....++.+.+.++|++.+++|+.++++++++++|+|++++ .|+||++||. .+ ..+.
T Consensus 84 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--------~g~iv~iss~~~~~~~~~ 155 (264)
T 3i4f_A 84 GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQN--------FGRIINYGFQGADSAPGW 155 (264)
T ss_dssp SCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCTTGGGCCCC
T ss_pred CCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC--------CCeEEEEeechhcccCCC
Confidence 99999999999 44557778889999999999999999999999999999876 6899999987 44 5566
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHh
Q 022386 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (298)
Q Consensus 164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L 243 (298)
+....|++||+|++.|+++++.|++ ++||+||+|+||+++|++.... .++.........|.+++.+|+|+|++++||
T Consensus 156 ~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~r~~~~~dva~~v~~l 232 (264)
T 3i4f_A 156 IYRSAFAAAKVGLVSLTKTVAYEEA-EYGITANMVCPGDIIGEMKEAT--IQEARQLKEHNTPIGRSGTGEDIARTISFL 232 (264)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCCCGGGGSCC--HHHHHHC--------CCCCHHHHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhh-hcCcEEEEEccCCccCccchhc--cHHHHHHHhhcCCCCCCcCHHHHHHHHHHH
Confidence 7789999999999999999999998 7899999999999998865433 344455556677889999999999999999
Q ss_pred cCCCCCCccccEEEeCCCCCCCC
Q 022386 244 ASDAGKYVNGNTLIVDGGNWLSN 266 (298)
Q Consensus 244 ~s~~~~~~~G~~i~~dgG~~~~~ 266 (298)
+++.+.++||+.|.+|||.+...
T Consensus 233 ~s~~~~~itG~~i~vdGG~~~~~ 255 (264)
T 3i4f_A 233 CEDDSDMITGTIIEVTGAVDVIH 255 (264)
T ss_dssp HSGGGTTCCSCEEEESCSCCCCC
T ss_pred cCcccCCCCCcEEEEcCceeecc
Confidence 99999999999999999988753
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-45 Score=320.05 Aligned_cols=240 Identities=23% Similarity=0.298 Sum_probs=214.9
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh-------HHHHHHHHHHhCCCCeEEEEccCCCHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-------VLRSAVAALHSLGIPAIGLEGDVRKREDAVRV 79 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~ 79 (298)
.++|++|++|||||++|||+++|++|+++|++|++++|+.+ .+++..+++...+.++.+++||++|+++++++
T Consensus 4 ~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 83 (285)
T 3sc4_A 4 SMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAA 83 (285)
T ss_dssp --CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHH
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence 35689999999999999999999999999999999999976 46777788877788899999999999999999
Q ss_pred HHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 80 VESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 80 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
++++.+.++++|++|||||+....++.+.+.++|++++++|+.++++++++++|+|++++ .|+||++||..+
T Consensus 84 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~--------~g~iv~isS~~~ 155 (285)
T 3sc4_A 84 VAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRD--------NPHILTLSPPIR 155 (285)
T ss_dssp HHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSS--------SCEEEECCCCCC
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--------CcEEEEECChhh
Confidence 999999999999999999998888899999999999999999999999999999998765 689999999998
Q ss_pred ccCC-CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCC-cccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHH
Q 022386 160 YTAT-WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG-PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA 237 (298)
Q Consensus 160 ~~~~-~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva 237 (298)
..+. +....|++||+|++.|+++++.|++ ++||+||+|+|| ++.|++. ........+.+++.+|+|+|
T Consensus 156 ~~~~~~~~~~Y~asKaal~~~~~~la~e~~-~~gI~vn~v~PG~~v~t~~~---------~~~~~~~~~~~r~~~pedvA 225 (285)
T 3sc4_A 156 LEPKWLRPTPYMMAKYGMTLCALGIAEELR-DAGIASNTLWPRTTVATAAV---------QNLLGGDEAMARSRKPEVYA 225 (285)
T ss_dssp CSGGGSCSHHHHHHHHHHHHHHHHHHHHTG-GGTCEEEEEECSSCBCCHHH---------HHHHTSCCCCTTCBCTHHHH
T ss_pred ccCCCCCCchHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEeCCCccccHHH---------HhhccccccccCCCCHHHHH
Confidence 8775 6789999999999999999999998 889999999999 5776532 12223345678899999999
Q ss_pred HHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 238 MAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 238 ~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
++++||+++.+ ++||+.+.+|||....
T Consensus 226 ~~~~~l~s~~~-~~tG~~i~~dgg~~~~ 252 (285)
T 3sc4_A 226 DAAYVVLNKPS-SYTGNTLLCEDVLLES 252 (285)
T ss_dssp HHHHHHHTSCT-TCCSCEEEHHHHHHHH
T ss_pred HHHHHHhCCcc-cccceEEEEcCchhcc
Confidence 99999999988 9999999999997764
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-45 Score=311.27 Aligned_cols=238 Identities=21% Similarity=0.184 Sum_probs=210.5
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcC--CcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
||++|||||++|||+++|++|+++| +.|++++|+.+.++++.+++ +.++.++.||++|+++++++++++.+.+++
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 78 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY---GDRFFYVVGDITEDSVLKQLVNAAVKGHGK 78 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH---GGGEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh---CCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 7999999999999999999999985 68889999988877776665 457899999999999999999999999999
Q ss_pred ccEEEECCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchh
Q 022386 90 LDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (298)
Q Consensus 90 id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~ 168 (298)
+|++|||||+.. ..++.+.+.++|++.+++|+.++++++++++|+|+++ +|+||++||..+..+.+....
T Consensus 79 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~---------~g~iv~isS~~~~~~~~~~~~ 149 (254)
T 3kzv_A 79 IDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKT---------NGNVVFVSSDACNMYFSSWGA 149 (254)
T ss_dssp CCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---------TCEEEEECCSCCCCSSCCSHH
T ss_pred ccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc---------CCeEEEEcCchhccCCCCcch
Confidence 999999999854 4788889999999999999999999999999999875 489999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC-------hHHHHHHHhhhccCCCCCCHHHHHHHHH
Q 022386 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-------PEEIRSKATDYMAAYKFGEKWDIAMAAL 241 (298)
Q Consensus 169 Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~dva~~~~ 241 (298)
|++||++++.|+++++.|+. |||||+|+||+++|++...... .++..+.+....+.+++.+|+|+|++++
T Consensus 150 Y~asK~a~~~~~~~la~e~~---~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~ 226 (254)
T 3kzv_A 150 YGSSKAALNHFAMTLANEER---QVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYA 226 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHCT---TSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcc---CcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcccHHHHHH
Confidence 99999999999999999973 8999999999999987644321 3556667777889999999999999999
Q ss_pred HhcCCC-CCCccccEEEeCCCCCC
Q 022386 242 YLASDA-GKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 242 ~L~s~~-~~~~~G~~i~~dgG~~~ 264 (298)
||+++. ++++||+.|.+|||...
T Consensus 227 ~L~s~~~~~~itG~~i~vdg~~~~ 250 (254)
T 3kzv_A 227 KLALHGIPDGVNGQYLSYNDPALA 250 (254)
T ss_dssp HHHHHCCCGGGTTCEEETTCGGGG
T ss_pred HHHhhcccCCCCccEEEecCcccc
Confidence 999998 49999999999999765
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-45 Score=317.13 Aligned_cols=248 Identities=28% Similarity=0.363 Sum_probs=207.5
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHH---HhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL---HSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~---~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
.+|++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++ ...+.++.++.||++|+++++++++++.
T Consensus 2 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (278)
T 1spx_A 2 TRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTL 81 (278)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHH
Confidence 4588999999999999999999999999999999999988888887777 3334578899999999999999999999
Q ss_pred HHhCCccEEEECCCCCCCCCCCCC----CHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc-
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDL----SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH- 159 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~- 159 (298)
+.++++|++|||||.....++.+. +.++|++.+++|+.++++++++++|.|+++ +|+||++||..+
T Consensus 82 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~---------~g~iv~isS~~~~ 152 (278)
T 1spx_A 82 GKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST---------KGEIVNISSIASG 152 (278)
T ss_dssp HHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---------TCEEEEECCTTSS
T ss_pred HHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc---------CCeEEEEeccccc
Confidence 999999999999998766667777 899999999999999999999999999875 388999999988
Q ss_pred ccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC-hHHH------HHHHhhhccCCCCCC
Q 022386 160 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEI------RSKATDYMAAYKFGE 232 (298)
Q Consensus 160 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~-~~~~------~~~~~~~~~~~~~~~ 232 (298)
..+.+....|++||++++.++++++.|++ ++||+||+|+||+++|++...... .+.. ........|.+++.+
T Consensus 153 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 231 (278)
T 1spx_A 153 LHATPDFPYYSIAKAAIDQYTRNTAIDLI-QHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQ 231 (278)
T ss_dssp SSCCTTSHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBC
T ss_pred ccCCCCccHHHHHHHHHHHHHHHHHHHHH-hcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCCcCCCC
Confidence 88888899999999999999999999998 789999999999999986533211 1111 333445567889999
Q ss_pred HHHHHHHHHHhcCCCCCC-ccccEEEeCCCCCCC
Q 022386 233 KWDIAMAALYLASDAGKY-VNGNTLIVDGGNWLS 265 (298)
Q Consensus 233 ~~dva~~~~~L~s~~~~~-~~G~~i~~dgG~~~~ 265 (298)
|+|+|+.++||+++++.+ ++|+.|.+|||..+.
T Consensus 232 ~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~ 265 (278)
T 1spx_A 232 PQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLI 265 (278)
T ss_dssp HHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred HHHHHHHHHHHcCccccCcccCcEEEECCCcccc
Confidence 999999999999987776 999999999998765
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-45 Score=313.14 Aligned_cols=243 Identities=30% Similarity=0.359 Sum_probs=214.8
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
.+|++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++ +.++.++++|++|+++++++++.+.+.+
T Consensus 2 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (253)
T 1hxh_A 2 NRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRL 78 (253)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3688999999999999999999999999999999999988777776666 5678999999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
+++|++|||||.....++.+.+.++|++.+++|+.+++++++.++|.|+++ +|+||++||..+..+.+...
T Consensus 79 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~ 149 (253)
T 1hxh_A 79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET---------GGSIINMASVSSWLPIEQYA 149 (253)
T ss_dssp CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT---------CEEEEEECCGGGTSCCTTBH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHc---------CCEEEEEcchhhcCCCCCCc
Confidence 999999999998777788889999999999999999999999999999864 38899999999999988999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCC--CeEEEEEeCCcccCCcccCcCChHHHHHH-Hhh---hccCCCCCCHHHHHHHHH
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDY--AIRVNGIAPGPIKDTAGVSKLAPEEIRSK-ATD---YMAAYKFGEKWDIAMAAL 241 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~--girv~~i~PG~v~t~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~dva~~~~ 241 (298)
.|++||++++.|+++++.|++ ++ ||+||+|+||+++|++......+ +.... +.. ..|.+++.+|+|+|+.++
T Consensus 150 ~Y~~sK~a~~~~~~~la~e~~-~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~ 227 (253)
T 1hxh_A 150 GYSASKAAVSALTRAAALSCR-KQGYAIRVNSIHPDGIYTPMMQASLPK-GVSKEMVLHDPKLNRAGRAYMPERIAQLVL 227 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HHTCCEEEEEEEESEECCHHHHHHSCT-TCCHHHHBCBTTTBTTCCEECHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHhh-hcCCCeEEEEEEeCCccCchhhhccch-hhhHHHHhhhhccCccCCCCCHHHHHHHHH
Confidence 999999999999999999997 66 89999999999998864321111 11111 233 467788999999999999
Q ss_pred HhcCCCCCCccccEEEeCCCCCC
Q 022386 242 YLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 242 ~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
||+++.+++++|+.|.+|||...
T Consensus 228 ~l~s~~~~~~tG~~~~vdgG~~~ 250 (253)
T 1hxh_A 228 FLASDESSVMSGSELHADNSILG 250 (253)
T ss_dssp HHHSGGGTTCCSCEEEESSSCTT
T ss_pred HHcCccccCCCCcEEEECCCccc
Confidence 99999889999999999999765
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-45 Score=312.05 Aligned_cols=238 Identities=18% Similarity=0.151 Sum_probs=198.9
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
.++++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.+.+.++.++.||++|+++++++++++.+.
T Consensus 3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~- 81 (252)
T 3h7a_A 3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH- 81 (252)
T ss_dssp --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh-
Confidence 4688999999999999999999999999999999999999999999999888889999999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
+++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|++++ .|+||++||..+..+.+...
T Consensus 82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~ 153 (252)
T 3h7a_A 82 APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHG--------QGKIFFTGATASLRGGSGFA 153 (252)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEEEEGGGTCCCTTCH
T ss_pred CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--------CcEEEEECCHHHcCCCCCCc
Confidence 9999999999998888888999999999999999999999999999999876 68999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEE-EEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRV-NGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv-~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
.|++||+|+..|+++++.|++ ++|||| |+|+||+++|++..... ++.........+.+ +.+|+|+|+.++||+++
T Consensus 154 ~Y~asKaa~~~l~~~la~e~~-~~gi~v~n~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~-~~~pedvA~~~~~l~s~ 229 (252)
T 3h7a_A 154 AFASAKFGLRAVAQSMARELM-PKNIHVAHLIIDSGVDTAWVRERR--EQMFGKDALANPDL-LMPPAAVAGAYWQLYQQ 229 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC------------------------------CCHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHHHHHHHhh-hcCCEEEEEecCCccCChhhhccc--hhhhhhhhhcCCcc-CCCHHHHHHHHHHHHhC
Confidence 999999999999999999998 789999 99999999998764432 22233344455666 89999999999999998
Q ss_pred CCCCccccEEEe
Q 022386 247 AGKYVNGNTLIV 258 (298)
Q Consensus 247 ~~~~~~G~~i~~ 258 (298)
+...++|++..-
T Consensus 230 ~~~~~~~~i~~~ 241 (252)
T 3h7a_A 230 PKSAWTFEMEIR 241 (252)
T ss_dssp CGGGBCSEEEEB
T ss_pred chhcceeeEEee
Confidence 888899987543
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-46 Score=317.67 Aligned_cols=246 Identities=26% Similarity=0.351 Sum_probs=200.2
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
++|++|++|||||++|||++++++|+++|++|++++|+.++. .+ +.+.++.+++||++|+++++++++.+.+ +
T Consensus 5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~---~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~ 77 (257)
T 3tl3_A 5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV---VA---DLGDRARFAAADVTDEAAVASALDLAET-M 77 (257)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH---HH---HTCTTEEEEECCTTCHHHHHHHHHHHHH-H
T ss_pred ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH---HH---hcCCceEEEECCCCCHHHHHHHHHHHHH-h
Confidence 468999999999999999999999999999999999975432 22 2366799999999999999999998877 9
Q ss_pred CCccEEEECCCCCCCC----CCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 88 GKLDILVNAAAGNFLV----PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 88 ~~id~li~~ag~~~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
+++|++|||||+.... +..+.+.++|++.+++|+.++++++++++|+|.+...........|+||++||..+..+.
T Consensus 78 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 157 (257)
T 3tl3_A 78 GTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQ 157 (257)
T ss_dssp SCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCH
T ss_pred CCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCC
Confidence 9999999999975322 223478999999999999999999999999998732111111236899999999999988
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccC-CCCCCHHHHHHHHHH
Q 022386 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA-YKFGEKWDIAMAALY 242 (298)
Q Consensus 164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~ 242 (298)
+....|++||+|++.|+++++.|++ ++||+||+|+||+++|++.... .++.........+. +++.+|+|+|++++|
T Consensus 158 ~~~~~Y~asKaa~~~~~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~r~~~p~dva~~v~~ 234 (257)
T 3tl3_A 158 IGQAAYSASKGGVVGMTLPIARDLA-SHRIRVMTIAPGLFDTPLLASL--PEEARASLGKQVPHPSRLGNPDEYGALAVH 234 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCTTC-----CHHHHHHHHHTSSSSCSCBCHHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEEecCccChhhhhc--cHHHHHHHHhcCCCCCCccCHHHHHHHHHH
Confidence 8899999999999999999999998 7899999999999999865442 34555566667777 899999999999999
Q ss_pred hcCCCCCCccccEEEeCCCCCCC
Q 022386 243 LASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 243 L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
|+++ .++||+.|.+|||.++.
T Consensus 235 l~s~--~~itG~~i~vdGG~~~~ 255 (257)
T 3tl3_A 235 IIEN--PMLNGEVIRLDGAIRMA 255 (257)
T ss_dssp HHHC--TTCCSCEEEESTTC---
T ss_pred HhcC--CCCCCCEEEECCCccCC
Confidence 9986 79999999999998764
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-45 Score=315.79 Aligned_cols=247 Identities=21% Similarity=0.229 Sum_probs=213.2
Q ss_pred CCCCCCcEEEEecCC--chhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t--~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
|.+|++|++|||||+ +|||++++++|+++|++|++++|+. ..++..+++.+..+...+++||++|+++++++++++.
T Consensus 4 m~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 82 (265)
T 1qsg_A 4 MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELG 82 (265)
T ss_dssp -CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred ccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHH
Confidence 345899999999999 9999999999999999999999987 4444555554433345789999999999999999999
Q ss_pred HHhCCccEEEECCCCCCC----CCCCC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 85 NHFGKLDILVNAAAGNFL----VPAED-LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~----~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
+.++++|++|||||+... .++.+ .+.++|++.+++|+.++++++++++|+|.+ +|+||++||..+
T Consensus 83 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~----------~g~iv~isS~~~ 152 (265)
T 1qsg_A 83 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP----------GSALLTLSYLGA 152 (265)
T ss_dssp TTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE----------EEEEEEEECGGG
T ss_pred HHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc----------CCEEEEEcchhh
Confidence 999999999999997653 45566 789999999999999999999999999863 478999999999
Q ss_pred ccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHH
Q 022386 160 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239 (298)
Q Consensus 160 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (298)
..+.+....|++||++++.++++++.|++ ++||+||+|+||+++|++.......++....+....|.+++.+|+|+|++
T Consensus 153 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~ 231 (265)
T 1qsg_A 153 ERAIPNYNVMGLAKASLEANVRYMANAMG-PEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNS 231 (265)
T ss_dssp TSBCTTTTHHHHHHHHHHHHHHHHHHHHT-TTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHH
T ss_pred ccCCCCchHHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence 88888889999999999999999999997 78999999999999998754332224444555566788899999999999
Q ss_pred HHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 240 ALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 240 ~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
++||+++.+.+++|+.|.+|||..+.
T Consensus 232 v~~l~s~~~~~~tG~~~~vdgG~~~~ 257 (265)
T 1qsg_A 232 AAFLCSDLSAGISGEVVHVDGGFSIA 257 (265)
T ss_dssp HHHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred HHHHhCchhcCccCCEEEECCCcCCC
Confidence 99999998899999999999998775
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-45 Score=315.27 Aligned_cols=249 Identities=24% Similarity=0.272 Sum_probs=216.1
Q ss_pred CCCCCCCCcEEEEecCC--chhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES 82 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t--~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~ 82 (298)
|...+|++|+++||||+ +|||++++++|+++|++|++++|+.+ .++..+++.+..+.+.++.+|++|++++++++++
T Consensus 1 M~~~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~ 79 (261)
T 2wyu_A 1 MLTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALGGALLFRADVTQDEELDALFAG 79 (261)
T ss_dssp CEEECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHH
T ss_pred CCccCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHH
Confidence 34457889999999999 99999999999999999999999875 4444455544323478899999999999999999
Q ss_pred HHHHhCCccEEEECCCCCCC----CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccc
Q 022386 83 TINHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (298)
Q Consensus 83 ~~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~ 158 (298)
+.+.++++|++|||||.... .++.+.+.++|++.+++|+.++++++++++|.|++ +|+||++||..
T Consensus 80 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~----------~g~iv~isS~~ 149 (261)
T 2wyu_A 80 VKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE----------GGGIVTLTYYA 149 (261)
T ss_dssp HHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE----------EEEEEEEECGG
T ss_pred HHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc----------CCEEEEEeccc
Confidence 99999999999999997653 56778899999999999999999999999999863 47899999999
Q ss_pred cccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHH
Q 022386 159 HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 238 (298)
Q Consensus 159 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 238 (298)
+..+.+....|++||++++.++++++.|++ ++||+||+|+||+++|++.......++....+....|.+++.+|+|+|+
T Consensus 150 ~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~ 228 (261)
T 2wyu_A 150 SEKVVPKYNVMAIAKAALEASVRYLAYELG-PKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGN 228 (261)
T ss_dssp GTSBCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTTSSCCCHHHHHH
T ss_pred ccCCCCCchHHHHHHHHHHHHHHHHHHHHh-hhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCCCCCCCHHHHHH
Confidence 988888899999999999999999999998 7899999999999999865433223444455566678899999999999
Q ss_pred HHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 239 AALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 239 ~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
.++||+++.+.+++|+.|.+|||..+.
T Consensus 229 ~v~~l~s~~~~~~tG~~~~vdgG~~~~ 255 (261)
T 2wyu_A 229 LGLFLLSPLASGITGEVVYVDAGYHIM 255 (261)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred HHHHHcChhhcCCCCCEEEECCCcccc
Confidence 999999998899999999999998764
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-45 Score=318.35 Aligned_cols=237 Identities=24% Similarity=0.328 Sum_probs=208.5
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhH-------HHHHHHHHHhCCCCeEEEEccCCCHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-------LRSAVAALHSLGIPAIGLEGDVRKREDAVRVV 80 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~ 80 (298)
++|+||++|||||++|||+++|++|+++|++|++++|+.+. +++..+.+...+.++.+++||++|++++++++
T Consensus 2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 81 (274)
T 3e03_A 2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV 81 (274)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence 46899999999999999999999999999999999998653 66777777777888999999999999999999
Q ss_pred HHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc
Q 022386 81 ESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 160 (298)
Q Consensus 81 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~ 160 (298)
+++.+.++++|++|||||+....++.+.+.++|++++++|+.++++++++++|+|++++ .|+||++||..+.
T Consensus 82 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~--------~g~iv~isS~~~~ 153 (274)
T 3e03_A 82 AATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAP--------NPHILTLAPPPSL 153 (274)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSS--------SCEEEECCCCCCC
T ss_pred HHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcC--------CceEEEECChHhc
Confidence 99999999999999999998778888899999999999999999999999999998765 6899999999988
Q ss_pred cC--CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCC-cccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHH
Q 022386 161 TA--TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG-PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA 237 (298)
Q Consensus 161 ~~--~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva 237 (298)
.+ .+....|++||+|+..|+++++.|++ ++||+||+|+|| +++|++.... ...+..++.+|+|+|
T Consensus 154 ~~~~~~~~~~Y~asKaal~~l~~~la~e~~-~~gI~vn~v~PG~~v~T~~~~~~-----------~~~~~~~~~~pedvA 221 (274)
T 3e03_A 154 NPAWWGAHTGYTLAKMGMSLVTLGLAAEFG-PQGVAINALWPRTVIATDAINML-----------PGVDAAACRRPEIMA 221 (274)
T ss_dssp CHHHHHHCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEECSBCBCC------------------CCCGGGSBCTHHHH
T ss_pred CCCCCCCCchHHHHHHHHHHHHHHHHHHhh-hcCEEEEEEECCcccccchhhhc-----------ccccccccCCHHHHH
Confidence 77 56788999999999999999999998 889999999999 6887754111 112334578999999
Q ss_pred HHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 238 MAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 238 ~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
+.++||+++.++++||+.| +|||.+..
T Consensus 222 ~~v~~l~s~~~~~itG~~i-~~~g~~~~ 248 (274)
T 3e03_A 222 DAAHAVLTREAAGFHGQFL-IDDEVLAQ 248 (274)
T ss_dssp HHHHHHHTSCCTTCCSCEE-EHHHHHHH
T ss_pred HHHHHHhCccccccCCeEE-EcCcchhh
Confidence 9999999999999999999 88886653
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=311.66 Aligned_cols=246 Identities=23% Similarity=0.268 Sum_probs=206.3
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
+|++|++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.+.+.++.++.||++|+++++++++++.+.++
T Consensus 1 Ml~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 80 (264)
T 3tfo_A 1 MVMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWG 80 (264)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 36799999999999999999999999999999999999999999999988888899999999999999999999999999
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchh
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~ 168 (298)
++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+..+.+....
T Consensus 81 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~--------~g~IV~isS~~~~~~~~~~~~ 152 (264)
T 3tfo_A 81 RIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQR--------SGQIINIGSIGALSVVPTAAV 152 (264)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTCCCTTCHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--------CeEEEEEcCHHHcccCCCChh
Confidence 999999999998888888999999999999999999999999999998876 699999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCC
Q 022386 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (298)
Q Consensus 169 Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~ 248 (298)
|++||+|+..|+++++.|+ + |||||+|+||+++|++...... ++..... . .....+.+|+|+|++++||+++..
T Consensus 153 Y~asKaal~~l~~~la~e~--~-gIrvn~v~PG~v~T~~~~~~~~-~~~~~~~-~-~~~~~~~~pedvA~~v~~l~s~~~ 226 (264)
T 3tfo_A 153 YCATKFAVRAISDGLRQES--T-NIRVTCVNPGVVESELAGTITH-EETMAAM-D-TYRAIALQPADIARAVRQVIEAPQ 226 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHC--S-SEEEEEEEECCC--------------------------CCCHHHHHHHHHHHHHSCT
T ss_pred HHHHHHHHHHHHHHHHHhC--C-CCEEEEEecCCCcCcccccccc-hhHHHHH-H-hhhccCCCHHHHHHHHHHHhcCCc
Confidence 9999999999999999997 4 8999999999999986543321 1111111 0 111235799999999999999999
Q ss_pred CCccccEEEeCCCCCCCCCC
Q 022386 249 KYVNGNTLIVDGGNWLSNPR 268 (298)
Q Consensus 249 ~~~~G~~i~~dgG~~~~~~~ 268 (298)
.+.+|+.+..++|..+...+
T Consensus 227 ~~~~~~i~i~p~~~~~~~~~ 246 (264)
T 3tfo_A 227 SVDTTEITIRPTASGNAENL 246 (264)
T ss_dssp TEEEEEEEEEECC-------
T ss_pred cCccceEEEecCccccccCc
Confidence 99999999999998765443
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-45 Score=310.05 Aligned_cols=237 Identities=23% Similarity=0.334 Sum_probs=194.6
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
+|++|+++||||++|||++++++|+++|++|++++|+.+. ...+ +.++.+|++|+++++++++++.+.++
T Consensus 4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--------~~~~--~~~~~~D~~d~~~~~~~~~~~~~~~g 73 (250)
T 2fwm_X 4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ--------EQYP--FATEVMDVADAAQVAQVCQRLLAETE 73 (250)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS--------SCCS--SEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh--------hcCC--ceEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 5889999999999999999999999999999999998641 1112 78889999999999999999999999
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchh
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~ 168 (298)
++|++|||||.....++.+.+.++|++.+++|+.++++++++++|+|++++ .|+||++||..+..+.+....
T Consensus 74 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~--------~g~iv~isS~~~~~~~~~~~~ 145 (250)
T 2fwm_X 74 RLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQR--------GGAIVTVASDAAHTPRIGMSA 145 (250)
T ss_dssp CCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CCEEEEECCGGGTSCCTTCHH
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcC--------CCEEEEECchhhCCCCCCCch
Confidence 999999999987777888899999999999999999999999999998765 689999999999999889999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHH-HHhh-------hccCCCCCCHHHHHHHH
Q 022386 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS-KATD-------YMAAYKFGEKWDIAMAA 240 (298)
Q Consensus 169 Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~dva~~~ 240 (298)
|++||++++.++++++.|++ ++||+||+|+||+++|++.......++..+ .+.. ..|.+++.+|+|+|+++
T Consensus 146 Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v 224 (250)
T 2fwm_X 146 YGASKAALKSLALSVGLELA-GSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTI 224 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCC------------------------------------CHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhC-ccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCCCCCcCHHHHHHHH
Confidence 99999999999999999998 789999999999999986543211121112 2222 45778899999999999
Q ss_pred HHhcCCCCCCccccEEEeCCCCCC
Q 022386 241 LYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 241 ~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
+||+++.+.+++|+.|.+|||.++
T Consensus 225 ~~l~s~~~~~~tG~~i~vdGG~~~ 248 (250)
T 2fwm_X 225 LFLASDLASHITLQDIVVDGGSTL 248 (250)
T ss_dssp HHHHSGGGTTCCSCEEEESTTTTT
T ss_pred HHHhCccccCCCCCEEEECCCccc
Confidence 999999889999999999999765
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-45 Score=314.36 Aligned_cols=241 Identities=24% Similarity=0.330 Sum_probs=200.8
Q ss_pred CCCCCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHH
Q 022386 2 ESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVE 81 (298)
Q Consensus 2 ~~~~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~ 81 (298)
++|....+|++|+++||||++|||++++++|+++|++|++++|+.+.++ ++.++.+|++|+++++++++
T Consensus 11 ~~~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~Dl~d~~~v~~~~~ 79 (253)
T 2nm0_A 11 SSGLVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-----------GFLAVKCDITDTEQVEQAYK 79 (253)
T ss_dssp ---------CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----------TSEEEECCTTSHHHHHHHHH
T ss_pred CCCCCccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-----------cceEEEecCCCHHHHHHHHH
Confidence 4678888999999999999999999999999999999999999865322 27789999999999999999
Q ss_pred HHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc
Q 022386 82 STINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 161 (298)
Q Consensus 82 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~ 161 (298)
++.+.++++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+..
T Consensus 80 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~--------~g~iv~isS~~~~~ 151 (253)
T 2nm0_A 80 EIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAK--------KGRVVLISSVVGLL 151 (253)
T ss_dssp HHHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHT--------CEEEEEECCCCCCC
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------CCEEEEECchhhCC
Confidence 9999999999999999987777777888899999999999999999999999998765 68999999999988
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHH
Q 022386 162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241 (298)
Q Consensus 162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~ 241 (298)
+.+....|++||++++.|+++++.|++ ++||+||+|+||+++|++.... .++.........+.+++.+|+|+|+.++
T Consensus 152 ~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~p~~~~~~p~dvA~~i~ 228 (253)
T 2nm0_A 152 GSAGQANYAASKAGLVGFARSLARELG-SRNITFNVVAPGFVDTDMTKVL--TDEQRANIVSQVPLGRYARPEEIAATVR 228 (253)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHC-SSSEEEEEEEECSBCC-----------CHHHHHTTCTTCSCBCHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEeCcCcCcchhhc--CHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 877889999999999999999999998 7899999999999998864321 1222233445567888999999999999
Q ss_pred HhcCCCCCCccccEEEeCCCCCC
Q 022386 242 YLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 242 ~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
||+++.+.+++|+.|.+|||..+
T Consensus 229 ~l~s~~~~~~tG~~i~vdGG~~~ 251 (253)
T 2nm0_A 229 FLASDDASYITGAVIPVDGGLGM 251 (253)
T ss_dssp HHHSGGGTTCCSCEEEESTTTTC
T ss_pred HHhCccccCCcCcEEEECCcccc
Confidence 99999889999999999999765
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-44 Score=312.96 Aligned_cols=247 Identities=27% Similarity=0.386 Sum_probs=208.8
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEE-cCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
+.++|++|||||++|||+++|++|+++|++|+++ .|+.+.++++.+.+.+.+.++.++.||++|+++++++++++.+.+
T Consensus 23 m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 102 (272)
T 4e3z_A 23 MSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF 102 (272)
T ss_dssp -CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 4568999999999999999999999999999876 788888888888888888889999999999999999999999999
Q ss_pred CCccEEEECCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC-C
Q 022386 88 GKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-Y 165 (298)
Q Consensus 88 ~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~-~ 165 (298)
+++|++|||||+... .++.+.+.++|++.+++|+.++++++++++|.|.+... ...|+||++||..+..+.+ .
T Consensus 103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-----~~~g~iv~isS~~~~~~~~~~ 177 (272)
T 4e3z_A 103 GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYS-----GQGGAIVNVSSMAAILGSATQ 177 (272)
T ss_dssp SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGT-----CCCEEEEEECCTHHHHCCTTT
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhcc-----CCCCEEEEEcchHhccCCCCC
Confidence 999999999998654 77788899999999999999999999999999987421 1168999999999887766 6
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcC
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s 245 (298)
...|++||+|++.|+++++.|++ ++||+|++|+||+++|++.... ..++.........+.+++.+|+|+|++++||++
T Consensus 178 ~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~s 255 (272)
T 4e3z_A 178 YVDYAASKAAIDTFTIGLAREVA-AEGIRVNAVRPGIIETDLHASG-GLPDRAREMAPSVPMQRAGMPEEVADAILYLLS 255 (272)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBC-------------------CCTTSSCBCHHHHHHHHHHHHS
T ss_pred cchhHHHHHHHHHHHHHHHHHHH-HcCcEEEEEecCCCcCCccccc-CChHHHHHHhhcCCcCCCcCHHHHHHHHHHHhC
Confidence 78899999999999999999998 7899999999999999865442 223344455666788899999999999999999
Q ss_pred CCCCCccccEEEeCCCC
Q 022386 246 DAGKYVNGNTLIVDGGN 262 (298)
Q Consensus 246 ~~~~~~~G~~i~~dgG~ 262 (298)
+.+.+++|+.|++|||+
T Consensus 256 ~~~~~~tG~~i~vdgG~ 272 (272)
T 4e3z_A 256 PSASYVTGSILNVSGGR 272 (272)
T ss_dssp GGGTTCCSCEEEESTTC
T ss_pred CccccccCCEEeecCCC
Confidence 99999999999999995
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-44 Score=305.48 Aligned_cols=251 Identities=27% Similarity=0.339 Sum_probs=222.9
Q ss_pred CCCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHH
Q 022386 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 4 ~~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
+|..++|++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++
T Consensus 5 ~~~~~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~ 84 (260)
T 3awd_A 5 YMEKLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSV 84 (260)
T ss_dssp TTGGGCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred cccccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 35556789999999999999999999999999999999999988888888888777778999999999999999999999
Q ss_pred HHHhCCccEEEECCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC
Q 022386 84 INHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~ 162 (298)
.+.++++|++|||||... ..++.+.+.++|++.+++|+.+++++++++.|.|.+++ .++||++||..+..+
T Consensus 85 ~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--------~~~iv~~sS~~~~~~ 156 (260)
T 3awd_A 85 HEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQK--------QGVIVAIGSMSGLIV 156 (260)
T ss_dssp HHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSC
T ss_pred HHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC--------CCEEEEEecchhccc
Confidence 999999999999999866 66778889999999999999999999999999998765 689999999988877
Q ss_pred CCCc--hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHH
Q 022386 163 TWYQ--IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240 (298)
Q Consensus 163 ~~~~--~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 240 (298)
.+.. ..|++||++++.++++++.|++ ++||+++.|+||+++|++.......++....+....+.+++.+|+|+|+++
T Consensus 157 ~~~~~~~~Y~~sK~a~~~~~~~l~~e~~-~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 235 (260)
T 3awd_A 157 NRPQQQAAYNASKAGVHQYIRSLAAEWA-PHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVV 235 (260)
T ss_dssp CSSSCCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTTSSCBCHHHHHHHH
T ss_pred CCCCCccccHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCCcCCCCCHHHHHHHH
Confidence 7666 8999999999999999999997 779999999999999886541222234445555667888899999999999
Q ss_pred HHhcCCCCCCccccEEEeCCCCC
Q 022386 241 LYLASDAGKYVNGNTLIVDGGNW 263 (298)
Q Consensus 241 ~~L~s~~~~~~~G~~i~~dgG~~ 263 (298)
.+|+++.+.+++|+.+++|||..
T Consensus 236 ~~l~~~~~~~~~G~~~~v~gg~~ 258 (260)
T 3awd_A 236 QFLASDAASLMTGAIVNVDAGFT 258 (260)
T ss_dssp HHHHSGGGTTCCSCEEEESTTTT
T ss_pred HHHhCchhccCCCcEEEECCcee
Confidence 99999888899999999999964
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-45 Score=313.40 Aligned_cols=234 Identities=27% Similarity=0.398 Sum_probs=207.5
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
|+++++|++|||||++|||+++|++|+++|++|++++|+.+... ..++.++.||++|+++++++++++.+.
T Consensus 23 m~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 93 (260)
T 3un1_A 23 MMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA---------DPDIHTVAGDISKPETADRIVREGIER 93 (260)
T ss_dssp HHHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS---------STTEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred hhCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc---------cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 45688999999999999999999999999999999999865321 236889999999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC--CC
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA--TW 164 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~--~~ 164 (298)
++++|++|||||+....++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+..+ .+
T Consensus 94 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~--------~g~iv~isS~~~~~~~~~~ 165 (260)
T 3un1_A 94 FGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQG--------SGHIVSITTSLVDQPMVGM 165 (260)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--------CEEEEEECCTTTTSCBTTC
T ss_pred CCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--------CcEEEEEechhhccCCCCC
Confidence 99999999999998778888899999999999999999999999999999876 689999999877643 34
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhc
Q 022386 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (298)
Q Consensus 165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~ 244 (298)
+...|++||+|++.|+++++.|++ ++||+||+|+||+++|++... +.........|.+++.+|+|+|++++||
T Consensus 166 ~~~~Y~~sKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~t~~~~~-----~~~~~~~~~~p~~r~~~~~dva~av~~L- 238 (260)
T 3un1_A 166 PSALASLTKGGLNAVTRSLAMEFS-RSGVRVNAVSPGVIKTPMHPA-----ETHSTLAGLHPVGRMGEIRDVVDAVLYL- 238 (260)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTT-TTTEEEEEEEECCBCCTTSCG-----GGHHHHHTTSTTSSCBCHHHHHHHHHHH-
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhC-cCCeEEEEEeecCCCCCCCCH-----HHHHHHhccCCCCCCcCHHHHHHHHHHh-
Confidence 568999999999999999999998 889999999999999986432 3344556677999999999999999999
Q ss_pred CCCCCCccccEEEeCCCCCCC
Q 022386 245 SDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 245 s~~~~~~~G~~i~~dgG~~~~ 265 (298)
+.+.+++|+.|++|||..+.
T Consensus 239 -~~~~~itG~~i~vdGG~~~~ 258 (260)
T 3un1_A 239 -EHAGFITGEILHVDGGQNAG 258 (260)
T ss_dssp -HHCTTCCSCEEEESTTGGGC
T ss_pred -cccCCCCCcEEEECCCeecc
Confidence 55789999999999998764
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-44 Score=312.06 Aligned_cols=244 Identities=32% Similarity=0.472 Sum_probs=211.7
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
+.+|+||+++||||++|||++++++|+++|++|++++|+.+.++++.+++. .+.++.||++|+++++++++++.+.
T Consensus 4 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~~~~~ 79 (270)
T 1yde_A 4 GTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP----GAVFILCDVTQEDDVKTLVSETIRR 79 (270)
T ss_dssp CCTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT----TEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CCeEEEcCCCCHHHHHHHHHHHHHH
Confidence 346899999999999999999999999999999999999877766655442 3788999999999999999999999
Q ss_pred hCCccEEEECCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC
Q 022386 87 FGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (298)
Q Consensus 87 ~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~ 165 (298)
++++|++|||||... ..++.+.+.++|++.+++|+.++++++++++|+|+++ .|+||++||..+..+.+.
T Consensus 80 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~ 150 (270)
T 1yde_A 80 FGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS---------QGNVINISSLVGAIGQAQ 150 (270)
T ss_dssp HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---------TCEEEEECCHHHHHCCTT
T ss_pred cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC---------CCEEEEEcCccccCCCCC
Confidence 999999999999764 3667788999999999999999999999999999764 488999999998888888
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc---CC-hHHHHHHHhhhccCCCCCCHHHHHHHHH
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK---LA-PEEIRSKATDYMAAYKFGEKWDIAMAAL 241 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~ 241 (298)
...|++||++++.++++++.|++ ++||+||+|+||+++|++.... .. ............|.+++.+|+|+|+.++
T Consensus 151 ~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~ 229 (270)
T 1yde_A 151 AVPYVATKGAVTAMTKALALDES-PYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAV 229 (270)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHhh-hhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCCCCcCHHHHHHHHH
Confidence 99999999999999999999998 7899999999999998754321 11 1111222234568899999999999999
Q ss_pred HhcCCCCCCccccEEEeCCCCCCC
Q 022386 242 YLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 242 ~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
||+++ ++++||+.|.+|||..+.
T Consensus 230 ~L~s~-~~~itG~~i~vdGG~~~~ 252 (270)
T 1yde_A 230 FLASE-ANFCTGIELLVTGGAELG 252 (270)
T ss_dssp HHHHH-CTTCCSCEEEESTTTTSC
T ss_pred HHccc-CCCcCCCEEEECCCeecc
Confidence 99997 789999999999998775
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-44 Score=308.63 Aligned_cols=239 Identities=30% Similarity=0.398 Sum_probs=213.8
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
.+|++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.. ++.++++|++|+++++++++++.+.+
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~~ 79 (260)
T 1nff_A 3 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD---AARYVHLDVTQPAQWKAAVDTAVTAF 79 (260)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG---GEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc---CceEEEecCCCHHHHHHHHHHHHHHc
Confidence 458899999999999999999999999999999999998877776665533 48889999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
+++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+..+.+...
T Consensus 80 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~ 151 (260)
T 1nff_A 80 GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG--------RGSIINISSIEGLAGTVACH 151 (260)
T ss_dssp SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCTTBH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--------CCEEEEEeehhhcCCCCCch
Confidence 9999999999987777788889999999999999999999999999998765 68999999999998888899
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~ 247 (298)
.|++||++++.++++++.|++ ++||+||+|+||+++|++.. ...+. +. ..+.+++.+|+|+|+.++||+++.
T Consensus 152 ~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~--~~~~~----~~-~~~~~~~~~~~dvA~~v~~l~s~~ 223 (260)
T 1nff_A 152 GYTATKFAVRGLTKSTALELG-PSGIRVNSIHPGLVKTPMTD--WVPED----IF-QTALGRAAEPVEVSNLVVYLASDE 223 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCSGGGT--TSCTT----CS-CCSSSSCBCHHHHHHHHHHHHSGG
T ss_pred hHHHHHHHHHHHHHHHHHHhC-ccCcEEEEEEeCCCCCCccc--cchhh----HH-hCccCCCCCHHHHHHHHHHHhCcc
Confidence 999999999999999999997 78999999999999988643 11111 11 457788999999999999999998
Q ss_pred CCCccccEEEeCCCCCCC
Q 022386 248 GKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 248 ~~~~~G~~i~~dgG~~~~ 265 (298)
+.+++|+.+.+|||..+.
T Consensus 224 ~~~~~G~~~~v~gG~~~~ 241 (260)
T 1nff_A 224 SSYSTGAEFVVDGGTVAG 241 (260)
T ss_dssp GTTCCSCEEEESTTGGGS
T ss_pred ccCCcCCEEEECCCeecc
Confidence 899999999999998764
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-44 Score=302.20 Aligned_cols=235 Identities=31% Similarity=0.428 Sum_probs=207.6
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
+|+++||||++|||++++++|+++|++|++++|+.+. ..+++ + +.++.+|+++ ++++++++++.+.++++|
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~---~--~~~~~~D~~~-~~~~~~~~~~~~~~g~id 72 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL---G--AVPLPTDLEK-DDPKGLVKRALEALGGLH 72 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH---T--CEEEECCTTT-SCHHHHHHHHHHHHTSCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh---C--cEEEecCCch-HHHHHHHHHHHHHcCCCC
Confidence 6899999999999999999999999999999999765 23333 2 7788999999 999999999999999999
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC--CCchhh
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--WYQIHV 169 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~--~~~~~Y 169 (298)
++|||||.....++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+..+. +....|
T Consensus 73 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~~~Y 144 (239)
T 2ekp_A 73 VLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG--------WGRVLFIGSVTTFTAGGPVPIPAY 144 (239)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCTTSCCHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--------CcEEEEECchhhccCCCCCCCccH
Confidence 999999987777888899999999999999999999999999998765 6899999999998877 788999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCCC
Q 022386 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK 249 (298)
Q Consensus 170 ~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~ 249 (298)
++||++++.++++++.|++ ++||+||+|+||+++|++.......++....+....|.+++.+|+|+|+.++||+++.++
T Consensus 145 ~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~ 223 (239)
T 2ekp_A 145 TTAKTALLGLTRALAKEWA-RLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDEAE 223 (239)
T ss_dssp HHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGT
T ss_pred HHHHHHHHHHHHHHHHHhh-hcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhc
Confidence 9999999999999999998 789999999999999886433211233444455567888999999999999999999889
Q ss_pred CccccEEEeCCCCCC
Q 022386 250 YVNGNTLIVDGGNWL 264 (298)
Q Consensus 250 ~~~G~~i~~dgG~~~ 264 (298)
+++|+.+.+|||..+
T Consensus 224 ~~tG~~~~vdgG~~~ 238 (239)
T 2ekp_A 224 YLTGQAVAVDGGFLA 238 (239)
T ss_dssp TCCSCEEEESTTTTT
T ss_pred CCCCCEEEECCCccc
Confidence 999999999999754
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-44 Score=308.67 Aligned_cols=250 Identities=23% Similarity=0.300 Sum_probs=215.9
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
+++.+|+||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++ +.++.++.||++|+++++++++.+
T Consensus 23 ~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~- 98 (281)
T 3ppi_A 23 VTIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL---GNRAEFVSTNVTSEDSVLAAIEAA- 98 (281)
T ss_dssp -CCGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHH-
T ss_pred hhhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHH-
Confidence 4566899999999999999999999999999999999999998888777776 567999999999999999999999
Q ss_pred HHhCCccEEEEC-CCCCCCCCC-----CCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccc
Q 022386 85 NHFGKLDILVNA-AAGNFLVPA-----EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (298)
Q Consensus 85 ~~~~~id~li~~-ag~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~ 158 (298)
+.++++|++||| +|......+ .+.+.++|++.+++|+.+++++++++++.|.+.... ....+|+||++||..
T Consensus 99 ~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~--~~~~~g~iv~isS~~ 176 (281)
T 3ppi_A 99 NQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPR--ENGERGALVLTASIA 176 (281)
T ss_dssp TTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCC--TTSCCEEEEEECCGG
T ss_pred HHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccc--ccCCCeEEEEEeccc
Confidence 889999999999 554443333 367889999999999999999999999999873210 112268999999999
Q ss_pred cccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccC-CCCCCHHHHH
Q 022386 159 HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA-YKFGEKWDIA 237 (298)
Q Consensus 159 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva 237 (298)
+..+.+....|++||+|++.|+++++.|++ ++||+||+|+||+++|++.... .++....+....+. +++.+|+|+|
T Consensus 177 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~~~~~pedvA 253 (281)
T 3ppi_A 177 GYEGQIGQTAYAAAKAGVIGLTIAAARDLS-SAGIRVNTIAPGTMKTPIMESV--GEEALAKFAANIPFPKRLGTPDEFA 253 (281)
T ss_dssp GTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHTT--CHHHHHHHHHTCCSSSSCBCHHHHH
T ss_pred ccCCCCCCcccHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCcCCchhhhcc--cHHHHHHHHhcCCCCCCCCCHHHHH
Confidence 999999999999999999999999999998 7899999999999998865432 34455566666777 8899999999
Q ss_pred HHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 238 MAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 238 ~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
++++||+++ .+++|+.|.+|||..+.
T Consensus 254 ~~v~~l~s~--~~~tG~~i~vdGG~~~~ 279 (281)
T 3ppi_A 254 DAAAFLLTN--GYINGEVMRLDGAQRFT 279 (281)
T ss_dssp HHHHHHHHC--SSCCSCEEEESTTCCCC
T ss_pred HHHHHHHcC--CCcCCcEEEECCCcccC
Confidence 999999985 79999999999998875
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-44 Score=306.89 Aligned_cols=237 Identities=19% Similarity=0.188 Sum_probs=204.1
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC--C-CCeEEEEccCCCHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--G-IPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~-~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
.++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+. + .++.++.||++|+++++++++++.
T Consensus 3 ~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 82 (250)
T 3nyw_A 3 LEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIH 82 (250)
T ss_dssp --CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHH
Confidence 3688999999999999999999999999999999999999999888888664 3 678899999999999999999999
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~ 164 (298)
+.++++|++|||||+....++ +.+.++|++.+++|+.++++++++++|+|++++ .|+||++||..+..+.+
T Consensus 83 ~~~g~iD~lvnnAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~ 153 (250)
T 3nyw_A 83 QKYGAVDILVNAAAMFMDGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQK--------NGYIFNVASRAAKYGFA 153 (250)
T ss_dssp HHHCCEEEEEECCCCCCCCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECC-------C
T ss_pred HhcCCCCEEEECCCcCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--------CeEEEEEccHHhcCCCC
Confidence 999999999999998777777 778899999999999999999999999998876 69999999999998777
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhc
Q 022386 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (298)
Q Consensus 165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~ 244 (298)
....|++||+|++.|+++++.|++ ++||+||+|+||+++|++.... ....+..++.+|+|+|+.+.||+
T Consensus 154 ~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~----------~~~~~~~~~~~p~dva~~v~~l~ 222 (250)
T 3nyw_A 154 DGGIYGSTKFALLGLAESLYRELA-PLGIRVTTLCPGWVNTDMAKKA----------GTPFKDEEMIQPDDLLNTIRCLL 222 (250)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBCSHHHHHT----------TCCSCGGGSBCHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHHHHHHhh-hcCcEEEEEecCcccCchhhhc----------CCCcccccCCCHHHHHHHHHHHH
Confidence 789999999999999999999998 7899999999999998753221 12245567899999999999999
Q ss_pred CCC-CCCccccEEEeCCCCCC
Q 022386 245 SDA-GKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 245 s~~-~~~~~G~~i~~dgG~~~ 264 (298)
+++ ..++++..|.+|||.-.
T Consensus 223 s~~~~~~~~~~~i~vd~~~~~ 243 (250)
T 3nyw_A 223 NLSENVCIKDIVFEMKKSIIE 243 (250)
T ss_dssp TSCTTEECCEEEEEEHHHHHC
T ss_pred cCCCceEeeEEEEEeeccccc
Confidence 965 45778889999999654
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=307.51 Aligned_cols=238 Identities=26% Similarity=0.364 Sum_probs=201.4
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
....+|++|+++||||++|||++++++|+++|++|++++|+.+.+++ +..+.+|++|+++++++++++.
T Consensus 8 ~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-----------~~~~~~D~~~~~~~~~~~~~~~ 76 (247)
T 1uzm_A 8 GAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG-----------LFGVEVDVTDSDAVDRAFTAVE 76 (247)
T ss_dssp -CCCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-----------SEEEECCTTCHHHHHHHHHHHH
T ss_pred cccccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH-----------hcCeeccCCCHHHHHHHHHHHH
Confidence 34456889999999999999999999999999999999998653221 2248899999999999999999
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~ 164 (298)
+.++++|++|||||.....++.+.+.++|++.+++|+.++++++++++|+|++++ .|+||++||..+..+.+
T Consensus 77 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~ 148 (247)
T 1uzm_A 77 EHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK--------FGRMIFIGSVSGLWGIG 148 (247)
T ss_dssp HHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--------CEEEEEECCCCC-----
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--------CCEEEEECCHhhccCCC
Confidence 9999999999999987777788899999999999999999999999999998765 68999999999988888
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhc
Q 022386 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (298)
Q Consensus 165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~ 244 (298)
....|++||++++.++++++.|++ ++||+||+|+||+++|++... . .++.........+.+++.+|+|+|+.++||+
T Consensus 149 ~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~-~-~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~ 225 (247)
T 1uzm_A 149 NQANYAASKAGVIGMARSIARELS-KANVTANVVAPGYIDTDMTRA-L-DERIQQGALQFIPAKRVGTPAEVAGVVSFLA 225 (247)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHH-S-CHHHHHHHGGGCTTCSCBCHHHHHHHHHHHH
T ss_pred CChhHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEEeCCCcccchhh-c-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence 899999999999999999999998 789999999999999876432 2 2333444555678889999999999999999
Q ss_pred CCCCCCccccEEEeCCCCCC
Q 022386 245 SDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 245 s~~~~~~~G~~i~~dgG~~~ 264 (298)
++.+.+++|+.|.+|||..+
T Consensus 226 s~~~~~~~G~~i~vdgG~~~ 245 (247)
T 1uzm_A 226 SEDASYISGAVIPVDGGMGM 245 (247)
T ss_dssp SGGGTTCCSCEEEESTTTTC
T ss_pred CccccCCcCCEEEECCCccc
Confidence 98889999999999999765
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-44 Score=312.46 Aligned_cols=243 Identities=25% Similarity=0.271 Sum_probs=207.9
Q ss_pred CCCCCCcEEEEecC--CchhHHHHHHHHHHcCCcEEEEcCChhH-HHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGG--GSGIGFEISLQLGKHGAAIAIMGRRKTV-LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 7 ~~~l~gk~~lVtG~--t~giG~~ia~~l~~~G~~Vv~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
|.+|+||+++|||| ++|||++++++|+++|++|++++|+.+. ++++.+ +.+.++.++.||++|+++++++++++
T Consensus 2 m~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~Dv~~~~~v~~~~~~~ 78 (269)
T 2h7i_A 2 TGLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD---RLPAKAPLLELDVQNEEHLASLAGRV 78 (269)
T ss_dssp CCTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHT---TSSSCCCEEECCTTCHHHHHHHHHHH
T ss_pred ccccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHH---hcCCCceEEEccCCCHHHHHHHHHHH
Confidence 45689999999999 9999999999999999999999998754 233332 23556888999999999999999999
Q ss_pred HHHhC---CccEEEECCCCCC-----CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEec
Q 022386 84 INHFG---KLDILVNAAAGNF-----LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS 155 (298)
Q Consensus 84 ~~~~~---~id~li~~ag~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vs 155 (298)
.+.++ ++|++|||||+.. ..++.+.+.++|++.+++|+.++++++++++|+|.+ +|+||++|
T Consensus 79 ~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~----------~g~iv~is 148 (269)
T 2h7i_A 79 TEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP----------GGSIVGMD 148 (269)
T ss_dssp HHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE----------EEEEEEEE
T ss_pred HHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc----------CCeEEEEc
Confidence 99999 9999999999765 467778899999999999999999999999999964 37899999
Q ss_pred ccccccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC---ChHH-------HHHHHhhhc
Q 022386 156 ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---APEE-------IRSKATDYM 225 (298)
Q Consensus 156 s~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~---~~~~-------~~~~~~~~~ 225 (298)
|... .+.+....|++||++++.|+++++.|++ ++||+||+|+||+++|++..... .+++ ..+.+....
T Consensus 149 s~~~-~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (269)
T 2h7i_A 149 FDPS-RAMPAYNWMTVAKSALESVNRFVAREAG-KYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRA 226 (269)
T ss_dssp CCCS-SCCTTTHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHC
T ss_pred Cccc-cccCchHHHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccC
Confidence 9776 5667788999999999999999999998 78999999999999998643211 1111 223344567
Q ss_pred cCC-CCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCC
Q 022386 226 AAY-KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 226 ~~~-~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
|.+ ++.+|+|+|++++||+++.++++||+.|.+|||..+
T Consensus 227 p~~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~ 266 (269)
T 2h7i_A 227 PIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHT 266 (269)
T ss_dssp TTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGGG
T ss_pred CcccCCCCHHHHHHHHHHHhCchhccCcceEEEecCCeee
Confidence 888 699999999999999999999999999999999765
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-44 Score=307.30 Aligned_cols=241 Identities=19% Similarity=0.189 Sum_probs=210.8
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
.+.+|++|||||++|||++++++|+++|++|++++|+.+.+++. ...++.++.+|++|+++++++++++.+.++
T Consensus 13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~------~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 86 (266)
T 3p19_A 13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL------NLPNTLCAQVDVTDKYTFDTAITRAEKIYG 86 (266)
T ss_dssp --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTT------CCTTEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHh------hcCCceEEEecCCCHHHHHHHHHHHHHHCC
Confidence 57899999999999999999999999999999999997654432 123688999999999999999999999999
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchh
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~ 168 (298)
++|++|||||+....++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+..+.+....
T Consensus 87 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~--------~g~IV~isS~~~~~~~~~~~~ 158 (266)
T 3p19_A 87 PADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARN--------CGTIINISSIAGKKTFPDHAA 158 (266)
T ss_dssp SEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CCEEEEECCGGGTSCCTTCHH
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--------CcEEEEEcChhhCCCCCCCch
Confidence 999999999998888888999999999999999999999999999999876 689999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHh-hhccCCCCCCHHHHHHHHHHhcCCC
Q 022386 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT-DYMAAYKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 169 Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dva~~~~~L~s~~ 247 (298)
|++||++++.|+++++.|++ ++||+||+|+||+++|++....... +...... ...+.+++.+|+|+|++++||++.+
T Consensus 159 Y~asK~a~~~~~~~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~r~~~pedvA~av~~l~~~~ 236 (266)
T 3p19_A 159 YCGTKFAVHAISENVREEVA-ASNVRVMTIAPSAVKTELLSHTTSQ-QIKDGYDAWRVDMGGVLAADDVARAVLFAYQQP 236 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBSSSGGGGCSCH-HHHHHHHHHHHHTTCCBCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHhc-ccCcEEEEEeeCccccchhhcccch-hhhHHHHhhcccccCCCCHHHHHHHHHHHHcCC
Confidence 99999999999999999998 7899999999999999876544332 2222222 2457889999999999999999998
Q ss_pred CCCccccEEEeCCCCCCC
Q 022386 248 GKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 248 ~~~~~G~~i~~dgG~~~~ 265 (298)
..+++++.+....+....
T Consensus 237 ~~~~~~~i~i~p~~~~~~ 254 (266)
T 3p19_A 237 QNVCIREIALAPTKQQPK 254 (266)
T ss_dssp TTEEEEEEEEEETTCCC-
T ss_pred CCccceeeEEecCCCCCc
Confidence 899999988887776554
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-44 Score=306.70 Aligned_cols=239 Identities=27% Similarity=0.352 Sum_probs=205.9
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
.+|++|+++||||++|||++++++|+++|++|++++|+.++++++. ++ .++.++.+|++|+++++ ++.+.+
T Consensus 2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~----~~~~~~~~D~~~~~~~~----~~~~~~ 72 (246)
T 2ag5_A 2 GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY----PGIQTRVLDVTKKKQID----QFANEV 72 (246)
T ss_dssp CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS----TTEEEEECCTTCHHHHH----HHHHHC
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc----cCceEEEeeCCCHHHHH----HHHHHh
Confidence 4688999999999999999999999999999999999976654433 22 26889999999999988 344567
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC-Cc
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-YQ 166 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~-~~ 166 (298)
+++|++|||||.....++.+.+.++|++.+++|+.++++++++++|+|.+++ .|+||++||..+..+.+ ..
T Consensus 73 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~ 144 (246)
T 2ag5_A 73 ERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK--------SGNIINMSSVASSVKGVVNR 144 (246)
T ss_dssp SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCSBTTTBCCTTB
T ss_pred CCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------CceEEEEechHhCcCCCCCC
Confidence 8999999999987777778889999999999999999999999999998765 68999999999888777 88
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC----ChHHHHHHHhhhccCCCCCCHHHHHHHHHH
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL----APEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 242 (298)
..|++||++++.++++++.|++ ++||+||+|+||+++|++..... ..++....+....+.+++.+|+|+|+.++|
T Consensus 145 ~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~ 223 (246)
T 2ag5_A 145 CVYSTTKAAVIGLTKSVAADFI-QQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVY 223 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 9999999999999999999998 78999999999999987543211 123334445556688899999999999999
Q ss_pred hcCCCCCCccccEEEeCCCCCC
Q 022386 243 LASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 243 L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
|+++.+.++||+.|.+|||..+
T Consensus 224 l~s~~~~~~tG~~i~vdgG~~~ 245 (246)
T 2ag5_A 224 LASDESAYVTGNPVIIDGGWSL 245 (246)
T ss_dssp HHSGGGTTCCSCEEEECTTGGG
T ss_pred HhCccccCCCCCEEEECCCccC
Confidence 9999899999999999999653
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=304.71 Aligned_cols=251 Identities=31% Similarity=0.493 Sum_probs=221.1
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcC-ChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
+.+|++|+++||||++|||++++++|+++|++|++++| +.+.++++.+++...+.++.++.+|++|+++++++++++.+
T Consensus 2 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (261)
T 1gee_A 2 YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIK 81 (261)
T ss_dssp CGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 34688999999999999999999999999999999999 77777888888877777899999999999999999999999
Q ss_pred HhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC
Q 022386 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~ 165 (298)
.++++|++|||||.....++.+.+.++|++.+++|+.+++++++++++.|.+++. .++||++||..+..+.+.
T Consensus 82 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-------~~~iv~isS~~~~~~~~~ 154 (261)
T 1gee_A 82 EFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDI-------KGTVINMSSVHEKIPWPL 154 (261)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC-------CCEEEEECCGGGTSCCTT
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCC-------CCEEEEeCCHHhcCCCCC
Confidence 9999999999999877677778899999999999999999999999999987531 378999999999988888
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcC
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s 245 (298)
...|++||++++.++++++.|++ ++||++++|+||+++|++.......++....+....+.+++.+|+|+|+++++|++
T Consensus 155 ~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~ 233 (261)
T 1gee_A 155 FVHYAASKGGMKLMTETLALEYA-PKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLAS 233 (261)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHS
T ss_pred ccHHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 99999999999999999999997 77999999999999988653321123333444455677889999999999999999
Q ss_pred CCCCCccccEEEeCCCCCCC
Q 022386 246 DAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 246 ~~~~~~~G~~i~~dgG~~~~ 265 (298)
+.+.+++|+.+.+|||..+.
T Consensus 234 ~~~~~~~G~~~~v~gg~~~~ 253 (261)
T 1gee_A 234 SEASYVTGITLFADGGMTLY 253 (261)
T ss_dssp GGGTTCCSCEEEESTTGGGC
T ss_pred ccccCCCCcEEEEcCCcccC
Confidence 88889999999999998763
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-43 Score=301.34 Aligned_cols=243 Identities=26% Similarity=0.418 Sum_probs=216.2
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHH-HhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~-~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
+|+++||||++|||++++++|+++|++|++++|+.+.+++..+++ ...+.++.++.+|++|+++++++++++.+.++++
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI 81 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 689999999999999999999999999999999988888877777 4445678999999999999999999999999999
Q ss_pred cEEEECCCCCCCCC---CCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 91 DILVNAAAGNFLVP---AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 91 d~li~~ag~~~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
|++|||||.....+ +.+.+.++|++.+++|+.+++++++.++|.|++++ .++||++||..+..+.+...
T Consensus 82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~ 153 (250)
T 2cfc_A 82 DVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG--------AGVIVNIASVASLVAFPGRS 153 (250)
T ss_dssp CEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCTTCH
T ss_pred CEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC--------CCEEEEECChhhccCCCCch
Confidence 99999999765555 67788999999999999999999999999998765 58999999999998888899
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~ 247 (298)
.|++||++++.++++++.|++ ++||+++.|+||+++|++.......+.....+....+.+++.+|+|+|+++++|++++
T Consensus 154 ~Y~~sK~a~~~~~~~l~~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 232 (250)
T 2cfc_A 154 AYTTSKGAVLQLTKSVAVDYA-GSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGED 232 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSTT
T ss_pred hHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCch
Confidence 999999999999999999997 7799999999999999865432222344445556678888999999999999999988
Q ss_pred CCCccccEEEeCCCCC
Q 022386 248 GKYVNGNTLIVDGGNW 263 (298)
Q Consensus 248 ~~~~~G~~i~~dgG~~ 263 (298)
+.+++|+.|.+|||.+
T Consensus 233 ~~~~~G~~~~v~gG~~ 248 (250)
T 2cfc_A 233 ATYVNGAALVMDGAYT 248 (250)
T ss_dssp CTTCCSCEEEESTTGG
T ss_pred hhcccCCEEEECCcee
Confidence 8999999999999965
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-43 Score=298.95 Aligned_cols=239 Identities=28% Similarity=0.335 Sum_probs=209.7
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
.+|++|+++||||++|||++++++|+++|++|++++|+.+.++++.+++.+.+.++.++.||++|+++++++++++.+.+
T Consensus 3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 82 (247)
T 2jah_A 3 SALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEAL 82 (247)
T ss_dssp CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 35889999999999999999999999999999999999988888888888777789999999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
+++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|.++ +|+||++||..+..+.+...
T Consensus 83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~ 153 (247)
T 2jah_A 83 GGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRS---------KGTVVQMSSIAGRVNVRNAA 153 (247)
T ss_dssp SCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---------TCEEEEECCGGGTCCCTTCH
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC---------CCEEEEEccHHhcCCCCCCc
Confidence 999999999998877888889999999999999999999999999999875 37899999999999988999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCC--CCHHHHHHHHHHhcC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKF--GEKWDIAMAALYLAS 245 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~dva~~~~~L~s 245 (298)
.|++||+++..|+++++.|++ ++||+||+|+||+++|++.... ..+...... ...+ +++ .+|+|+|+.++||++
T Consensus 154 ~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~-~~~~-~~~~~~~pedvA~~v~~l~s 229 (247)
T 2jah_A 154 VYQATKFGVNAFSETLRQEVT-ERGVRVVVIEPGTTDTELRGHI-THTATKEMY-EQRI-SQIRKLQAQDIAEAVRYAVT 229 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBSSSGGGGC-CCHHHHHHH-HHHT-TTSCCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEECCCCCCcchhcc-cchhhHHHH-Hhcc-cccCCCCHHHHHHHHHHHhC
Confidence 999999999999999999998 7899999999999999875432 222222222 2223 455 899999999999999
Q ss_pred CCCCCccccEEEeCC
Q 022386 246 DAGKYVNGNTLIVDG 260 (298)
Q Consensus 246 ~~~~~~~G~~i~~dg 260 (298)
+.+.+.+++. .+++
T Consensus 230 ~~~~~~~~~i-~i~~ 243 (247)
T 2jah_A 230 APHHATVHEI-FIRP 243 (247)
T ss_dssp SCTTEEEEEE-EEEE
T ss_pred CCccCccceE-EecC
Confidence 8888887764 4543
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=303.04 Aligned_cols=243 Identities=31% Similarity=0.362 Sum_probs=200.3
Q ss_pred CCCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHH
Q 022386 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 4 ~~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
+....++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++. .++.++.+|+++.+++++++++
T Consensus 6 ~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~- 81 (249)
T 3f9i_A 6 HHHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK---DNYTIEVCNLANKEECSNLISK- 81 (249)
T ss_dssp ---CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---SSEEEEECCTTSHHHHHHHHHT-
T ss_pred ccccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc---cCccEEEcCCCCHHHHHHHHHh-
Confidence 356678999999999999999999999999999999999999888887776663 4688999999999999888764
Q ss_pred HHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
++++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+..+.
T Consensus 82 ---~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~ 150 (249)
T 3f9i_A 82 ---TSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKR--------YGRIINISSIVGIAGN 150 (249)
T ss_dssp ---CSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCCCC--CC
T ss_pred ---cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--------CcEEEEEccHHhccCC
Confidence 47899999999987777777788899999999999999999999999998866 6899999999999999
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHh
Q 022386 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (298)
Q Consensus 164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L 243 (298)
+....|++||+|++.++++++.|++ ++||+||+|+||+++|++.... .++.........+.+++.+|+|+|+++.||
T Consensus 151 ~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l 227 (249)
T 3f9i_A 151 PGQANYCASKAGLIGMTKSLSYEVA-TRGITVNAVAPGFIKSDMTDKL--NEKQREAIVQKIPLGTYGIPEDVAYAVAFL 227 (249)
T ss_dssp SCSHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBC------C--CHHHHHHHHHHCTTCSCBCHHHHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHH-HcCcEEEEEecCccccCccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 9999999999999999999999998 7899999999999998865433 345556667778999999999999999999
Q ss_pred cCCCCCCccccEEEeCCCCCC
Q 022386 244 ASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 244 ~s~~~~~~~G~~i~~dgG~~~ 264 (298)
+++.+.+++|+.|.+|||..+
T Consensus 228 ~s~~~~~~tG~~~~vdgG~~~ 248 (249)
T 3f9i_A 228 ASNNASYITGQTLHVNGGMLM 248 (249)
T ss_dssp HSGGGTTCCSCEEEESTTSSC
T ss_pred cCCccCCccCcEEEECCCEee
Confidence 999999999999999999765
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-43 Score=303.52 Aligned_cols=238 Identities=24% Similarity=0.285 Sum_probs=207.9
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
.|.+|++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.+.++.++.||++++++++++++.+.+
T Consensus 23 ~m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 102 (262)
T 3rkr_A 23 HMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLA 102 (262)
T ss_dssp --CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred hhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999999999999999999988888899999999999999999999999
Q ss_pred HhCCccEEEECCCC-CCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC
Q 022386 86 HFGKLDILVNAAAG-NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (298)
Q Consensus 86 ~~~~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~ 164 (298)
.++++|++|||||. ...+++.+.+.++|++.+++|+.++++++++++|+|.+++ .|+||++||..+..+.+
T Consensus 103 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~ 174 (262)
T 3rkr_A 103 AHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAK--------RGHIINISSLAGKNPVA 174 (262)
T ss_dssp HHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--------CCEEEEECSSCSSCCCT
T ss_pred hcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--------CceEEEEechhhcCCCC
Confidence 99999999999998 4557778889999999999999999999999999998865 68999999999999999
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhc
Q 022386 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (298)
Q Consensus 165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~ 244 (298)
....|++||++++.|+++++.|++ ++||+||+|+||+++|++..... ...+..++.+|+|+|+++.||+
T Consensus 175 ~~~~Y~asKaa~~~l~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~----------~~~~~~~~~~p~dvA~~v~~l~ 243 (262)
T 3rkr_A 175 DGAAYTASKWGLNGLMTSAAEELR-QHQVRVSLVAPGSVRTEFGVGLS----------AKKSALGAIEPDDIADVVALLA 243 (262)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCC--------------------------CCCHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEecCCCcCCcccccc----------cccccccCCCHHHHHHHHHHHh
Confidence 999999999999999999999998 78999999999999987643321 1224566789999999999999
Q ss_pred CCCCCCccccEEEeCCCC
Q 022386 245 SDAGKYVNGNTLIVDGGN 262 (298)
Q Consensus 245 s~~~~~~~G~~i~~dgG~ 262 (298)
++...+++|+.+..+.+.
T Consensus 244 s~~~~~~~g~~~i~p~~~ 261 (262)
T 3rkr_A 244 TQADQSFISEVLVRPTLK 261 (262)
T ss_dssp TCCTTCCEEEEEEECCCC
T ss_pred cCccccccCcEEeccccC
Confidence 999999999999887663
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-43 Score=305.17 Aligned_cols=246 Identities=30% Similarity=0.392 Sum_probs=219.6
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
...|++|+++||||++|||+++++.|+++|++|++++|+.+.++++.+++.+.+.++.++.+|++|+++++++++++.+.
T Consensus 39 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 118 (285)
T 2c07_A 39 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTE 118 (285)
T ss_dssp CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHh
Confidence 45688999999999999999999999999999999999988888888888777788999999999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
++++|++|||||.....++.+.+.++|++.+++|+.+++++++.++|.|.+++ .++||++||..+..+.+..
T Consensus 119 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~ 190 (285)
T 2c07_A 119 HKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR--------YGRIINISSIVGLTGNVGQ 190 (285)
T ss_dssp CSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT--------CEEEEEECCTHHHHCCTTC
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC--------CCEEEEECChhhccCCCCC
Confidence 99999999999988777888889999999999999999999999999998765 5899999999998888889
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
..|++||++++.++++++.|++ +.||+|++|+||+++|++... . .+..........+.+++.+|+|+|+++++|+++
T Consensus 191 ~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~-~-~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~ 267 (285)
T 2c07_A 191 ANYSSSKAGVIGFTKSLAKELA-SRNITVNAIAPGFISSDMTDK-I-SEQIKKNIISNIPAGRMGTPEEVANLACFLSSD 267 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCC------C-CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSG
T ss_pred chHHHHHHHHHHHHHHHHHHHH-HhCcEEEEEEeCcEecCchhh-c-CHHHHHHHHhhCCCCCCCCHHHHHHHHHHHhCC
Confidence 9999999999999999999997 779999999999999886433 2 234444555567788899999999999999998
Q ss_pred CCCCccccEEEeCCCCC
Q 022386 247 AGKYVNGNTLIVDGGNW 263 (298)
Q Consensus 247 ~~~~~~G~~i~~dgG~~ 263 (298)
.+.+++|+.|.+|||..
T Consensus 268 ~~~~~~G~~i~v~gG~~ 284 (285)
T 2c07_A 268 KSGYINGRVFVIDGGLS 284 (285)
T ss_dssp GGTTCCSCEEEESTTSC
T ss_pred CcCCCCCCEEEeCCCcc
Confidence 88999999999999965
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-43 Score=315.08 Aligned_cols=236 Identities=26% Similarity=0.315 Sum_probs=211.1
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhH-------HHHHHHHHHhCCCCeEEEEccCCCHHHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-------LRSAVAALHSLGIPAIGLEGDVRKREDAVR 78 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~ 78 (298)
++.+|+||++|||||++|||+++|++|+++|++|++++|+.+. +++..+++...+.++.++.||++|++++++
T Consensus 39 ~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~ 118 (346)
T 3kvo_A 39 NTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISA 118 (346)
T ss_dssp CCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred cCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHH
Confidence 4568999999999999999999999999999999999998764 567778888888889999999999999999
Q ss_pred HHHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccc
Q 022386 79 VVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (298)
Q Consensus 79 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~ 158 (298)
+++++.+.++++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++++ .|+||++||..
T Consensus 119 ~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~--------~g~IV~iSS~~ 190 (346)
T 3kvo_A 119 AVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSK--------VAHILNISPPL 190 (346)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCS--------SCEEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC--------CCEEEEECCHH
Confidence 9999999999999999999998888888999999999999999999999999999998865 68999999999
Q ss_pred cccC--CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCc-ccCCcccCcCChHHHHHHHhhhccCCCCCCHHH
Q 022386 159 HYTA--TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP-IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 235 (298)
Q Consensus 159 ~~~~--~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 235 (298)
+..+ .+....|++||+++..++++++.|++ .||+||+|+||+ ++|++. ..+....+.+++.+|+|
T Consensus 191 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~--~gIrvn~v~PG~~i~T~~~----------~~~~~~~~~~r~~~ped 258 (346)
T 3kvo_A 191 NLNPVWFKQHCAYTIAKYGMSMYVLGMAEEFK--GEIAVNALWPKTAIHTAAM----------DMLGGPGIESQCRKVDI 258 (346)
T ss_dssp CCCGGGTSSSHHHHHHHHHHHHHHHHHHHHTT--TTCEEEEEECSBCBCCHHH----------HHHCC--CGGGCBCTHH
T ss_pred HcCCCCCCCchHHHHHHHHHHHHHHHHHHHhc--CCcEEEEEeCCCccccHHH----------HhhccccccccCCCHHH
Confidence 8877 67789999999999999999999996 599999999995 776532 22233345677899999
Q ss_pred HHHHHHHhcCCCCCCccccEEEeCCCCC
Q 022386 236 IAMAALYLASDAGKYVNGNTLIVDGGNW 263 (298)
Q Consensus 236 va~~~~~L~s~~~~~~~G~~i~~dgG~~ 263 (298)
+|++++||+++ ++++||+.+ +|||..
T Consensus 259 vA~~v~~L~s~-~~~itG~~i-vdgg~~ 284 (346)
T 3kvo_A 259 IADAAYSIFQK-PKSFTGNFV-IDENIL 284 (346)
T ss_dssp HHHHHHHHHTS-CTTCCSCEE-EHHHHH
T ss_pred HHHHHHHHHhc-CCCCCceEE-ECCcEe
Confidence 99999999999 899999998 999954
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-43 Score=305.18 Aligned_cols=249 Identities=27% Similarity=0.390 Sum_probs=195.5
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
..+|++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|+++.++++++++++.+.
T Consensus 9 ~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 88 (266)
T 1xq1_A 9 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM 88 (266)
T ss_dssp TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHH
Confidence 34688999999999999999999999999999999999988888888888777778999999999999999999999999
Q ss_pred h-CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC
Q 022386 87 F-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (298)
Q Consensus 87 ~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~ 165 (298)
+ +++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|++.+ .++||++||..+..+.+.
T Consensus 89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~ 160 (266)
T 1xq1_A 89 FGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG--------CGNIIFMSSIAGVVSASV 160 (266)
T ss_dssp HTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--------SCEEEEEC----------
T ss_pred hCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--------CcEEEEEccchhccCCCC
Confidence 9 8999999999987777778889999999999999999999999999998765 589999999999888888
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcC
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s 245 (298)
...|++||++++.++++++.|++ ++||++++|+||++.|++..... .+..........+.+++.+|+|+|+++.+|++
T Consensus 161 ~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~ 238 (266)
T 1xq1_A 161 GSIYSATKGALNQLARNLACEWA-SDGIRANAVAPAVIATPLAEAVY-DDEFKKVVISRKPLGRFGEPEEVSSLVAFLCM 238 (266)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEECCSCC--------------------------CCGGGGHHHHHHHTS
T ss_pred CchHHHHHHHHHHHHHHHHHHHh-HhCcEEEEEeeCCCccchhhhhc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence 89999999999999999999997 77999999999999988654332 22333334445677789999999999999999
Q ss_pred CCCCCccccEEEeCCCCCCC
Q 022386 246 DAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 246 ~~~~~~~G~~i~~dgG~~~~ 265 (298)
+.+.+++|+.|.+|||..+.
T Consensus 239 ~~~~~~~G~~~~v~gG~~~~ 258 (266)
T 1xq1_A 239 PAASYITGQTICVDGGLTVN 258 (266)
T ss_dssp GGGTTCCSCEEECCCCEEET
T ss_pred ccccCccCcEEEEcCCcccc
Confidence 88899999999999998753
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-43 Score=302.02 Aligned_cols=237 Identities=23% Similarity=0.313 Sum_probs=209.6
Q ss_pred CCCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCC-CCeEEEEccC--CCHHHHHHHH
Q 022386 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDV--RKREDAVRVV 80 (298)
Q Consensus 4 ~~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl--s~~~~~~~~~ 80 (298)
.+.+.+|+||+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+ .++.++.+|+ ++.+++++++
T Consensus 6 ~~~~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~ 85 (247)
T 3i1j_A 6 SAHPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELA 85 (247)
T ss_dssp CCCTTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHH
T ss_pred CCCCccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHH
Confidence 356678999999999999999999999999999999999999999999999888765 5677777777 9999999999
Q ss_pred HHHHHHhCCccEEEECCCCC-CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 81 ESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 81 ~~~~~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
+++.+.++++|++|||||+. ...++.+.+.++|++.+++|+.++++++++++|+|++++ .++||++||..+
T Consensus 86 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--------~~~iv~isS~~~ 157 (247)
T 3i1j_A 86 ARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSE--------DASIAFTSSSVG 157 (247)
T ss_dssp HHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS--------SEEEEEECCGGG
T ss_pred HHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC--------CCeEEEEcchhh
Confidence 99999999999999999975 457788889999999999999999999999999998765 689999999999
Q ss_pred ccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHH
Q 022386 160 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239 (298)
Q Consensus 160 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (298)
..+.+....|++||++++.|+++++.|+....||+||+|+||+++|++....... ....++.+|+|+++.
T Consensus 158 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~~----------~~~~~~~~p~dva~~ 227 (247)
T 3i1j_A 158 RKGRANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYPD----------ENPLNNPAPEDIMPV 227 (247)
T ss_dssp TSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHSTT----------SCGGGSCCGGGGTHH
T ss_pred cCCCCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhcccc----------cCccCCCCHHHHHHH
Confidence 9999999999999999999999999999622799999999999998754322111 122346789999999
Q ss_pred HHHhcCCCCCCccccEEEe
Q 022386 240 ALYLASDAGKYVNGNTLIV 258 (298)
Q Consensus 240 ~~~L~s~~~~~~~G~~i~~ 258 (298)
++||+++.+.++||+.|++
T Consensus 228 ~~~l~s~~~~~itG~~i~~ 246 (247)
T 3i1j_A 228 YLYLMGPDSTGINGQALNA 246 (247)
T ss_dssp HHHHHSGGGTTCCSCEEEC
T ss_pred HHHHhCchhccccCeeecC
Confidence 9999999999999999976
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-43 Score=299.06 Aligned_cols=245 Identities=31% Similarity=0.404 Sum_probs=215.3
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCe-EEEEccCCCHHHHHHHHHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA-IGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~-~~~~~Dls~~~~~~~~~~~~~ 84 (298)
++++|++|+++||||++|||++++++|+++|++|++++|+.+++++..+++ +.++ .++.+|++|.++++++++.+.
T Consensus 5 ~~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (254)
T 2wsb_A 5 TVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL---GAAVAARIVADVTDAEAMTAAAAEAE 81 (254)
T ss_dssp TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEEECCTTCHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cccceeEEEEecCCHHHHHHHHHHHH
Confidence 345689999999999999999999999999999999999988777776666 3456 889999999999999999998
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~ 164 (298)
+ ++++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|++++ .++||++||..+..+.+
T Consensus 82 ~-~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~ 152 (254)
T 2wsb_A 82 A-VAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARG--------AGAIVNLGSMSGTIVNR 152 (254)
T ss_dssp H-HSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCS
T ss_pred h-hCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--------CcEEEEEecchhccCCC
Confidence 8 99999999999987777788889999999999999999999999999998865 68999999999887777
Q ss_pred Cc--hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHH
Q 022386 165 YQ--IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (298)
Q Consensus 165 ~~--~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 242 (298)
.. ..|++||++++.++++++.|++ ++||+++.|+||+++|++.......++....+....+.+++.+|+|+|+++++
T Consensus 153 ~~~~~~Y~~sK~a~~~~~~~~~~~~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 231 (254)
T 2wsb_A 153 PQFASSYMASKGAVHQLTRALAAEWA-GRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALF 231 (254)
T ss_dssp SSCBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTTSSCBCHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEEecccCchhhhccccChHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 76 8999999999999999999997 77999999999999987643322223444455556678889999999999999
Q ss_pred hcCCCCCCccccEEEeCCCCC
Q 022386 243 LASDAGKYVNGNTLIVDGGNW 263 (298)
Q Consensus 243 L~s~~~~~~~G~~i~~dgG~~ 263 (298)
|+++.+.+++|+.+.+|||..
T Consensus 232 l~~~~~~~~~G~~~~v~gG~~ 252 (254)
T 2wsb_A 232 LASPAASYVTGAILAVDGGYT 252 (254)
T ss_dssp HHSGGGTTCCSCEEEESTTGG
T ss_pred HhCcccccccCCEEEECCCEe
Confidence 999888899999999999964
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-43 Score=304.63 Aligned_cols=248 Identities=26% Similarity=0.384 Sum_probs=217.3
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
+.+++|++|++|||||++|||++++++|+++|++|++++|+.+..++..+.+...+.++.++.+|++|.++++++++.+.
T Consensus 27 ~~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 106 (279)
T 3ctm_A 27 LDLFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQE 106 (279)
T ss_dssp GGGGCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHH
Confidence 34456899999999999999999999999999999999999877777777776667789999999999999999999999
Q ss_pred HHhCCccEEEECCCCCCC-CCCC-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC
Q 022386 85 NHFGKLDILVNAAAGNFL-VPAE-DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~-~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~ 162 (298)
+.++++|++|||||.... .++. +.+.++|++.+++|+.+++++++.+++.|++++ .++||++||..+..+
T Consensus 107 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--------~~~iv~isS~~~~~~ 178 (279)
T 3ctm_A 107 KDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG--------KGSLIITSSISGKIV 178 (279)
T ss_dssp HHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CCEEEEECCCTTSCC
T ss_pred HHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--------CCeEEEECchHhccC
Confidence 999999999999997655 6666 778899999999999999999999999998765 689999999998877
Q ss_pred --CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHH
Q 022386 163 --TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240 (298)
Q Consensus 163 --~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 240 (298)
.+....|++||++++.++++++.|++ ++| +||+|+||+++|++... ..++....+....+.+++.+|+|+|+.+
T Consensus 179 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~-~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~~p~~~~~~~~dvA~~~ 254 (279)
T 3ctm_A 179 NIPQLQAPYNTAKAACTHLAKSLAIEWA-PFA-RVNTISPGYIDTDITDF--ASKDMKAKWWQLTPLGREGLTQELVGGY 254 (279)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHTT-TTC-EEEEEEECSBSSTTTSS--CCHHHHHHHHHHSTTCSCBCGGGTHHHH
T ss_pred CCCCCcccHHHHHHHHHHHHHHHHHHhc-ccC-CEEEEeccCCccccccc--cChHHHHHHHHhCCccCCcCHHHHHHHH
Confidence 67788999999999999999999997 778 99999999999986532 2344444455667888999999999999
Q ss_pred HHhcCCCCCCccccEEEeCCCCCC
Q 022386 241 LYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 241 ~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
+||+++.+.+++|+.|.+|||..+
T Consensus 255 ~~l~s~~~~~~tG~~i~vdgG~~~ 278 (279)
T 3ctm_A 255 LYLASNASTFTTGSDVVIDGGYTC 278 (279)
T ss_dssp HHHHSGGGTTCCSCEEEESTTCCC
T ss_pred HHHhCccccCccCCEEEECCCeec
Confidence 999999889999999999999764
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-43 Score=299.36 Aligned_cols=244 Identities=29% Similarity=0.447 Sum_probs=196.9
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEE-cCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
+|++|+++||||++|||++++++|+++|++|+++ .|+.+.+++..+++.+.+.++.++.+|++|+++++++++++.+.+
T Consensus 2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (247)
T 2hq1_A 2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF 81 (247)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 4789999999999999999999999999999998 677777778888887777889999999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
+++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|++++ .++||++||..+..+.+...
T Consensus 82 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~ 153 (247)
T 2hq1_A 82 GRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQK--------SGKIINITSIAGIIGNAGQA 153 (247)
T ss_dssp SCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHT--------CEEEEEECC---------CH
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--------CcEEEEEcChhhccCCCCCc
Confidence 9999999999987666777788899999999999999999999999998765 58999999998888888899
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~ 247 (298)
.|++||++++.++++++.|++ +.||++|.|.||+++|++... . ++.....+....+.+++.+|+|+++++.+|+++.
T Consensus 154 ~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~-~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 230 (247)
T 2hq1_A 154 NYAASKAGLIGFTKSIAKEFA-AKGIYCNAVAPGIIKTDMTDV-L-PDKVKEMYLNNIPLKRFGTPEEVANVVGFLASDD 230 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHT-S-CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HhHHHHHHHHHHHHHHHHHHH-HcCcEEEEEEEEEEeccchhh-c-chHHHHHHHhhCCCCCCCCHHHHHHHHHHHcCcc
Confidence 999999999999999999997 779999999999999875432 2 2334444555667788999999999999999988
Q ss_pred CCCccccEEEeCCCCC
Q 022386 248 GKYVNGNTLIVDGGNW 263 (298)
Q Consensus 248 ~~~~~G~~i~~dgG~~ 263 (298)
+.+++|+.+++|||..
T Consensus 231 ~~~~~G~~~~v~gG~~ 246 (247)
T 2hq1_A 231 SNYITGQVINIDGGLV 246 (247)
T ss_dssp GTTCCSCEEEESTTC-
T ss_pred cccccCcEEEeCCCcc
Confidence 8899999999999965
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-42 Score=296.84 Aligned_cols=248 Identities=31% Similarity=0.485 Sum_probs=222.0
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
..+|++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.||++|+++++++++++.+.
T Consensus 6 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 85 (255)
T 1fmc_A 6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK 85 (255)
T ss_dssp GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 34588999999999999999999999999999999999998888888888877788999999999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
++++|++|||||.....++ +.+.++|++.+++|+.++++++++++|.|++.+ .++||++||..+..+.++.
T Consensus 86 ~~~~d~vi~~Ag~~~~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~ 156 (255)
T 1fmc_A 86 LGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG--------GGVILTITSMAAENKNINM 156 (255)
T ss_dssp HSSCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTCCCTTC
T ss_pred cCCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--------CcEEEEEcchhhcCCCCCC
Confidence 9999999999998766555 678999999999999999999999999998765 6899999999999888889
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
..|++||++++.+++.++.|++ ++||+++.|.||++.|++..... .++.........+.+++.+|+|+|+++.+|+++
T Consensus 157 ~~Y~~sK~a~~~~~~~~~~~~~-~~~i~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 234 (255)
T 1fmc_A 157 TSYASSKAAASHLVRNMAFDLG-EKNIRVNGIAPGAILTDALKSVI-TPEIEQKMLQHTPIRRLGQPQDIANAALFLCSP 234 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-TTTEEEEEEEECSBCSHHHHTTC-CHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSG
T ss_pred cccHHHHHHHHHHHHHHHHHhh-hcCcEEEEEecccCcchhhhhcc-ChHHHHHHHhcCCcccCCCHHHHHHHHHHHhCC
Confidence 9999999999999999999997 77999999999999987654332 244445555667888999999999999999998
Q ss_pred CCCCccccEEEeCCCCCCC
Q 022386 247 AGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 247 ~~~~~~G~~i~~dgG~~~~ 265 (298)
.+.+++|+.+++|||...+
T Consensus 235 ~~~~~~G~~~~v~gg~~~s 253 (255)
T 1fmc_A 235 AASWVSGQILTVSGGGVQE 253 (255)
T ss_dssp GGTTCCSCEEEESTTSCCC
T ss_pred ccccCCCcEEEECCceecc
Confidence 8889999999999998764
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-44 Score=305.05 Aligned_cols=241 Identities=20% Similarity=0.187 Sum_probs=210.5
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHH---cCCcEEEEcCChhHHHHHHHHHHhC--CCCeEEEEccCCCHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGK---HGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVES 82 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~---~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~ 82 (298)
.+|++|++|||||++|||++++++|++ +|++|++++|+.+.++++.+++.+. +.++.++.||++|+++++++++.
T Consensus 2 ~~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 81 (259)
T 1oaa_A 2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA 81 (259)
T ss_dssp CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHH
Confidence 468899999999999999999999999 8999999999998888888888664 56789999999999999999999
Q ss_pred HHH--HhCCcc--EEEECCCCCCC--CCCCC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc--CCCCCCCCCCcEEEE
Q 022386 83 TIN--HFGKLD--ILVNAAAGNFL--VPAED-LSPNGFRTVIEIDSVGTFIMCHEALKYLKKG--GRGQASSSSGGIIIN 153 (298)
Q Consensus 83 ~~~--~~~~id--~li~~ag~~~~--~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~~~~~~~g~iv~ 153 (298)
+.+ .++++| ++|||||+... .++.+ .+.++|++.+++|+.++++++++++|.|+++ + .|+||+
T Consensus 82 ~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~--------~g~iv~ 153 (259)
T 1oaa_A 82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGL--------SKTVVN 153 (259)
T ss_dssp HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTC--------EEEEEE
T ss_pred HHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC--------CceEEE
Confidence 988 678999 99999997543 45666 6899999999999999999999999999765 3 589999
Q ss_pred ecccccccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC---ChHHHHHHHhhhccCCCC
Q 022386 154 ISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---APEEIRSKATDYMAAYKF 230 (298)
Q Consensus 154 vss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~ 230 (298)
+||..+..+.+....|++||++++.|+++++.|++ +|+||+|+||+++|++..... ..++....+....|.+++
T Consensus 154 isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~---~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 230 (259)
T 1oaa_A 154 ISSLCALQPYKGWGLYCAGKAARDMLYQVLAAEEP---SVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGAL 230 (259)
T ss_dssp ECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHCT---TEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCS
T ss_pred EcCchhcCCCCCccHHHHHHHHHHHHHHHHHhhCC---CceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhhcCCc
Confidence 99999999999999999999999999999999986 399999999999988643211 123334445556678899
Q ss_pred CCHHHHHHHHHHhcCCCCCCccccEEEeCC
Q 022386 231 GEKWDIAMAALYLASDAGKYVNGNTLIVDG 260 (298)
Q Consensus 231 ~~~~dva~~~~~L~s~~~~~~~G~~i~~dg 260 (298)
.+|+|+|+.++||+++ ++++||+.|.+||
T Consensus 231 ~~p~dvA~~v~~l~~~-~~~itG~~i~vdg 259 (259)
T 1oaa_A 231 VDCGTSAQKLLGLLQK-DTFQSGAHVDFYD 259 (259)
T ss_dssp BCHHHHHHHHHHHHHH-CCSCTTEEEETTC
T ss_pred CCHHHHHHHHHHHHhh-ccccCCcEEeccC
Confidence 9999999999999985 6899999999986
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-42 Score=295.59 Aligned_cols=247 Identities=28% Similarity=0.395 Sum_probs=216.2
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
.+|++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... .++.++.+|++|+++++++++.+.+.+
T Consensus 2 ~~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (251)
T 1zk4_A 2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP-DQIQFFQHDSSDEDGWTKLFDATEKAF 80 (251)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc-CceEEEECCCCCHHHHHHHHHHHHHHh
Confidence 3588999999999999999999999999999999999988777776666433 578999999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCC-cEEEEecccccccCCCCc
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSG-GIIINISATLHYTATWYQ 166 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~-g~iv~vss~~~~~~~~~~ 166 (298)
+++|++|||||.....++.+.+.++|++.+++|+.+++++++.++|.|++++ . ++||++||..+..+.+..
T Consensus 81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--------~~~~iv~isS~~~~~~~~~~ 152 (251)
T 1zk4_A 81 GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKG--------LGASIINMSSIEGFVGDPSL 152 (251)
T ss_dssp SSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS--------SCEEEEEECCGGGTSCCTTC
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC--------CCCEEEEeCCchhccCCCCC
Confidence 9999999999987777788889999999999999999999999999998754 3 789999999999888889
Q ss_pred hhhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcC
Q 022386 167 IHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~-~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s 245 (298)
..|++||++++.++++++.|+. .++||+++.|+||+++|++... ...+..........+.+++.+|+|+|+.+.+|++
T Consensus 153 ~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~ 231 (251)
T 1zk4_A 153 GAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDD-LPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLAS 231 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHT-STTHHHHHTSTTTCTTSSCBCHHHHHHHHHHHHS
T ss_pred ccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhh-cCchhhhHHHhhcCCCCCCcCHHHHHHHHHHHcC
Confidence 9999999999999999999974 2469999999999999886543 2222222323445677889999999999999999
Q ss_pred CCCCCccccEEEeCCCCCC
Q 022386 246 DAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 246 ~~~~~~~G~~i~~dgG~~~ 264 (298)
+.+.+++|+.+.+|||..+
T Consensus 232 ~~~~~~~G~~~~v~gG~~~ 250 (251)
T 1zk4_A 232 NESKFATGSEFVVDGGYTA 250 (251)
T ss_dssp GGGTTCCSCEEEESTTGGG
T ss_pred cccccccCcEEEECCCccC
Confidence 8888999999999999764
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-44 Score=304.65 Aligned_cols=232 Identities=20% Similarity=0.265 Sum_probs=204.0
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHH-cCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGK-HGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~-~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
.++|++|||||++|||+++|++|++ .|+.|++++|+.+. ...++.+++||++|+++++++++.+. ++
T Consensus 2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~----------~~~~~~~~~~Dv~~~~~v~~~~~~~~--~~ 69 (244)
T 4e4y_A 2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF----------SAENLKFIKADLTKQQDITNVLDIIK--NV 69 (244)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC----------CCTTEEEEECCTTCHHHHHHHHHHTT--TC
T ss_pred CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc----------ccccceEEecCcCCHHHHHHHHHHHH--hC
Confidence 4689999999999999999999999 78899999887541 12357889999999999999996554 78
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchh
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~ 168 (298)
++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|++ +|+||++||..+..+.+....
T Consensus 70 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~----------~g~iv~~sS~~~~~~~~~~~~ 139 (244)
T 4e4y_A 70 SFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKV----------GASIVFNGSDQCFIAKPNSFA 139 (244)
T ss_dssp CEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEE----------EEEEEEECCGGGTCCCTTBHH
T ss_pred CCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhcc----------CcEEEEECCHHHccCCCCCch
Confidence 9999999999987788889999999999999999999999999999975 378999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC---------ChHHHHHHHhhhccCCCCCCHHHHHHH
Q 022386 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---------APEEIRSKATDYMAAYKFGEKWDIAMA 239 (298)
Q Consensus 169 Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (298)
|++||++++.|+++++.|++ ++||+||+|+||+++|++..... ..++.........|.+++.+|+|+|++
T Consensus 140 Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~ 218 (244)
T 4e4y_A 140 YTLSKGAIAQMTKSLALDLA-KYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAEL 218 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHH-HcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHH
Confidence 99999999999999999998 78999999999999988643321 112244556677889999999999999
Q ss_pred HHHhcCCCCCCccccEEEeCCCCCC
Q 022386 240 ALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 240 ~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
++||+++.+.++||+.|.+|||.++
T Consensus 219 v~~l~s~~~~~itG~~i~vdGG~~~ 243 (244)
T 4e4y_A 219 VIFLLSDKSKFMTGGLIPIDGGYTA 243 (244)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHHhcCccccccCCeEeECCCccC
Confidence 9999999999999999999999765
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-43 Score=301.25 Aligned_cols=237 Identities=25% Similarity=0.333 Sum_probs=189.0
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
+|.++.+|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++ +.++.+++||++|+++++++++++.+
T Consensus 22 ~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~ 98 (272)
T 4dyv_A 22 SMSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI---GDDALCVPTDVTDPDSVRALFTATVE 98 (272)
T ss_dssp ------CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---TSCCEEEECCTTSHHHHHHHHHHHHH
T ss_pred hhcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHH
Confidence 466789999999999999999999999999999999999988888777766 46789999999999999999999999
Q ss_pred HhCCccEEEECCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC
Q 022386 86 HFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~ 164 (298)
.++++|+||||||+... .++.+.+.++|++.+++|+.++++++++++|.|++++. .+|+||++||..+..+.+
T Consensus 99 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~------~~g~IV~isS~~~~~~~~ 172 (272)
T 4dyv_A 99 KFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEP------RGGRIINNGSISATSPRP 172 (272)
T ss_dssp HHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSS------CCEEEEEECCSSTTSCCT
T ss_pred HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCC------CCcEEEEECchhhcCCCC
Confidence 99999999999998644 67888999999999999999999999999999987641 148999999999999999
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhc
Q 022386 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (298)
Q Consensus 165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~ 244 (298)
....|++||+|++.|+++++.|++ ++||+||+|+||+++|++....... ........+..++.+|+|+|++++||+
T Consensus 173 ~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~~~~~pedvA~~v~fL~ 248 (272)
T 4dyv_A 173 YSAPYTATKHAITGLTKSTSLDGR-VHDIACGQIDIGNADTPMAQKMKAG---VPQADLSIKVEPVMDVAHVASAVVYMA 248 (272)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEEECC---------------------------CHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHhC-ccCEEEEEEEECcccChhhhhhccc---chhhhhcccccCCCCHHHHHHHHHHHh
Confidence 999999999999999999999998 7899999999999999865433211 111223356677899999999999999
Q ss_pred CCCCCCccccE
Q 022386 245 SDAGKYVNGNT 255 (298)
Q Consensus 245 s~~~~~~~G~~ 255 (298)
+.+.....++.
T Consensus 249 s~~~~~~~~~i 259 (272)
T 4dyv_A 249 SLPLDANVQFM 259 (272)
T ss_dssp HSCTTSCCCEE
T ss_pred CCCCcCccceE
Confidence 97655443433
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=304.46 Aligned_cols=253 Identities=32% Similarity=0.540 Sum_probs=219.4
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC-CCCeEEEEccCCCHHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
+...+|+||+++||||++|||++++++|+++|++|++++|+.+.+++..+++.+. +.++.++.||++|.++++++++.+
T Consensus 19 ~~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 98 (302)
T 1w6u_A 19 LPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSEL 98 (302)
T ss_dssp SCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHH
Confidence 3556799999999999999999999999999999999999998888888877665 678999999999999999999999
Q ss_pred HHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
.+.++++|++|||||.....++.+.+.++|++.+++|+.+++++++++++.|.++.. .++||++||..+..+.
T Consensus 99 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-------~~~iv~isS~~~~~~~ 171 (302)
T 1w6u_A 99 IKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQK-------GAAFLSITTIYAETGS 171 (302)
T ss_dssp HHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-------CEEEEEECCTHHHHCC
T ss_pred HHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-------CCEEEEEcccccccCC
Confidence 999999999999999877777778899999999999999999999999999974321 5899999999998888
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCCh-HHHHHHHhhhccCCCCCCHHHHHHHHHH
Q 022386 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDIAMAALY 242 (298)
Q Consensus 164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~ 242 (298)
+....|++||++++.++++++.+++ ++||++++|+||+++|+.+.....+ ...........+.+++.+|+|+|+++++
T Consensus 172 ~~~~~Y~~sK~a~~~~~~~la~~~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~ 250 (302)
T 1w6u_A 172 GFVVPSASAKAGVEAMSKSLAAEWG-KYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAF 250 (302)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHH
T ss_pred CCcchhHHHHHHHHHHHHHHHHHhh-hcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCcCCCCCHHHHHHHHHH
Confidence 8899999999999999999999997 7899999999999998743332222 2222344556788889999999999999
Q ss_pred hcCCCCCCccccEEEeCCCCCCC
Q 022386 243 LASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 243 L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
|+++.+.+++|+.+++|||..+.
T Consensus 251 l~~~~~~~~~G~~~~v~gg~~~~ 273 (302)
T 1w6u_A 251 LCSDYASWINGAVIKFDGGEEVL 273 (302)
T ss_dssp HTSGGGTTCCSCEEEESTTHHHH
T ss_pred HcCCcccccCCCEEEECCCeeec
Confidence 99988889999999999998764
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=295.41 Aligned_cols=241 Identities=27% Similarity=0.395 Sum_probs=215.3
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEE-EcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
||+++||||++|||++++++|+++|++|++ .+|+.+..+++.+++...+.++.++.+|++++++++++++++.+.++++
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 80 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI 80 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 689999999999999999999999999998 5888888888877777667789999999999999999999999999999
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhH
Q 022386 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS 170 (298)
Q Consensus 91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~ 170 (298)
|++|||||.....++.+.+.++|++.+++|+.++++++++++|+|.+++ .++||++||..+..+.+....|+
T Consensus 81 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~Y~ 152 (244)
T 1edo_A 81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR--------KGRIINIASVVGLIGNIGQANYA 152 (244)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCTHHHHCCTTCHHHH
T ss_pred CEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC--------CCEEEEECChhhcCCCCCCccch
Confidence 9999999987777777889999999999999999999999999998765 68999999998888888899999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhc-CCCCC
Q 022386 171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA-SDAGK 249 (298)
Q Consensus 171 ~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~-s~~~~ 249 (298)
+||++++.+++.++.|+. ++||++++|+||+++|++.... .+..........+.+++.+|+|+|+++.+|+ ++.+.
T Consensus 153 ~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~ 229 (244)
T 1edo_A 153 AAKAGVIGFSKTAAREGA-SRNINVNVVCPGFIASDMTAKL--GEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAAS 229 (244)
T ss_dssp HHHHHHHHHHHHHHHHHH-TTTEEEEEEEECSBCSHHHHTT--CHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGG
T ss_pred hhHHHHHHHHHHHHHHhh-hcCCEEEEEeeCccccchhhhc--ChHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCccC
Confidence 999999999999999997 7899999999999998764332 2334444555678888999999999999999 67788
Q ss_pred CccccEEEeCCCCC
Q 022386 250 YVNGNTLIVDGGNW 263 (298)
Q Consensus 250 ~~~G~~i~~dgG~~ 263 (298)
+++|+.+.+|||..
T Consensus 230 ~~~G~~~~v~gG~~ 243 (244)
T 1edo_A 230 YITGQAFTIDGGIA 243 (244)
T ss_dssp GCCSCEEEESTTTT
T ss_pred CcCCCEEEeCCCcc
Confidence 99999999999965
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-42 Score=294.51 Aligned_cols=225 Identities=20% Similarity=0.260 Sum_probs=191.4
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
|.+|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.. ++.++.||++|+++++++++++.+.+++
T Consensus 1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 77 (235)
T 3l6e_A 1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGN---AVIGIVADLAHHEDVDVAFAAAVEWGGL 77 (235)
T ss_dssp --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---GEEEEECCTTSHHHHHHHHHHHHHHHCS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC---CceEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 4579999999999999999999999999999999999888888777732 5889999999999999999999999999
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhh
Q 022386 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 169 (298)
Q Consensus 90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y 169 (298)
+|++|||||+....++.+.+.++|++.+++|+.++++++++++|.|+++ +++||++||..+..+.+....|
T Consensus 78 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~---------~~~iv~isS~~~~~~~~~~~~Y 148 (235)
T 3l6e_A 78 PELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGER---------GGVLANVLSSAAQVGKANESLY 148 (235)
T ss_dssp CSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT---------CEEEEEECCEECCSSCSSHHHH
T ss_pred CcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---------CCEEEEEeCHHhcCCCCCCcHH
Confidence 9999999999877888899999999999999999999999999999875 3699999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcC-CCC
Q 022386 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS-DAG 248 (298)
Q Consensus 170 ~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s-~~~ 248 (298)
++||+|++.|+++++.|++ ++||+||+|+||+++|++...... .+..++.+|+|+|+.++||++ +.+
T Consensus 149 ~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~-----------~~~~~~~~pedvA~~v~~l~~~~~~ 216 (235)
T 3l6e_A 149 CASKWGMRGFLESLRAELK-DSPLRLVNLYPSGIRSEFWDNTDH-----------VDPSGFMTPEDAAAYMLDALEARSS 216 (235)
T ss_dssp HHHHHHHHHHHHHHHHHTT-TSSEEEEEEEEEEECCCC----------------------CBCHHHHHHHHHHHTCCCSS
T ss_pred HHHHHHHHHHHHHHHHHhh-ccCCEEEEEeCCCccCcchhccCC-----------CCCcCCCCHHHHHHHHHHHHhCCCC
Confidence 9999999999999999998 889999999999999886433211 133468899999999999998 566
Q ss_pred CCccccEEEe
Q 022386 249 KYVNGNTLIV 258 (298)
Q Consensus 249 ~~~~G~~i~~ 258 (298)
.+++|-.+.-
T Consensus 217 ~~i~~i~~~~ 226 (235)
T 3l6e_A 217 CHVTDLFIGR 226 (235)
T ss_dssp EEEEEEEEEE
T ss_pred cceeeEEEec
Confidence 7888866543
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-42 Score=294.30 Aligned_cols=244 Identities=30% Similarity=0.429 Sum_probs=217.5
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHh-CCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.+|++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.+ .+.++.++.+|++|+++++++++++.+.
T Consensus 3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (248)
T 2pnf_A 3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNL 82 (248)
T ss_dssp CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 358899999999999999999999999999999999998888877777765 4667999999999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
++++|++|||||.....++.+.+.++|++.+++|+.+++++++.++|.|.+++ .++||++||..+..+.+..
T Consensus 83 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~ 154 (248)
T 2pnf_A 83 VDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQR--------WGRIVNISSVVGFTGNVGQ 154 (248)
T ss_dssp SSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHT--------CEEEEEECCHHHHHCCTTC
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC--------CcEEEEEccHHhcCCCCCC
Confidence 99999999999987767777889999999999999999999999999998765 5899999999888888888
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
..|++||++++.+++.++.|++ +.||+++.|+||+++|++... . .+..........+.+++.+|+|+|+++.+|+++
T Consensus 155 ~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~v~Pg~v~t~~~~~-~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 231 (248)
T 2pnf_A 155 VNYSTTKAGLIGFTKSLAKELA-PRNVLVNAVAPGFIETDMTAV-L-SEEIKQKYKEQIPLGRFGSPEEVANVVLFLCSE 231 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCGGGGG-S-CHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSG
T ss_pred chHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEeceecCchhhh-c-cHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCc
Confidence 9999999999999999999997 779999999999999886543 2 233444445556778899999999999999998
Q ss_pred CCCCccccEEEeCCCC
Q 022386 247 AGKYVNGNTLIVDGGN 262 (298)
Q Consensus 247 ~~~~~~G~~i~~dgG~ 262 (298)
...+++|+.+.+|||.
T Consensus 232 ~~~~~~G~~~~v~gg~ 247 (248)
T 2pnf_A 232 LASYITGEVIHVNGGM 247 (248)
T ss_dssp GGTTCCSCEEEESTTC
T ss_pred hhhcCCCcEEEeCCCc
Confidence 8889999999999995
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-42 Score=303.26 Aligned_cols=251 Identities=33% Similarity=0.548 Sum_probs=219.1
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHh-----CCCCeEEEEccCCCHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-----LGIPAIGLEGDVRKREDAVRV 79 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dls~~~~~~~~ 79 (298)
+.+..|++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.. .+.++.++.+|++++++++++
T Consensus 11 ~~~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~ 90 (303)
T 1yxm_A 11 LAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNL 90 (303)
T ss_dssp BCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHH
T ss_pred cCcCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHH
Confidence 556689999999999999999999999999999999999999888888888876 466799999999999999999
Q ss_pred HHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 80 VESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 80 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
++.+.+.++++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.+.++. .++||++||..
T Consensus 91 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--------~~~iv~isS~~- 161 (303)
T 1yxm_A 91 VKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH--------GGSIVNIIVPT- 161 (303)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH--------CEEEEEECCCC-
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc--------CCeEEEEEeec-
Confidence 999999999999999999987667777889999999999999999999999999655433 58999999988
Q ss_pred ccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC--hHHHHHHHhhhccCCCCCCHHHHH
Q 022386 160 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDYMAAYKFGEKWDIA 237 (298)
Q Consensus 160 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva 237 (298)
..+.+....|+++|+++..++++++.|+. ++||++++|+||+++|+....... .++.........+.+++.+|+|+|
T Consensus 162 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA 240 (303)
T 1yxm_A 162 KAGFPLAVHSGAARAGVYNLTKSLALEWA-CSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVS 240 (303)
T ss_dssp TTCCTTCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHH
T ss_pred ccCCCcchhhHHHHHHHHHHHHHHHHHhc-ccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCcccCCCCHHHHH
Confidence 77778889999999999999999999997 779999999999999884322211 122233344556778899999999
Q ss_pred HHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 238 MAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 238 ~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
++++||+++.+.+++|+.|.+|||..+.
T Consensus 241 ~~i~~l~~~~~~~~~G~~~~v~gG~~~~ 268 (303)
T 1yxm_A 241 SVVCFLLSPAASFITGQSVDVDGGRSLY 268 (303)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred HHHHHHhCcccccCCCcEEEECCCeecc
Confidence 9999999988899999999999998764
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-43 Score=301.05 Aligned_cols=233 Identities=18% Similarity=0.174 Sum_probs=202.2
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEE-c--CChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIM-G--RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~-~--r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
||+++||||++|||++++++|+++|++|+++ + |+.+.+++..+++ .+ +|+.|+++++++++++.+.++
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~--~~-------~~~~~~~~v~~~~~~~~~~~g 71 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN--PG-------TIALAEQKPERLVDATLQHGE 71 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS--TT-------EEECCCCCGGGHHHHHGGGSS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh--CC-------CcccCHHHHHHHHHHHHHHcC
Confidence 5899999999999999999999999999999 7 9987777766655 12 233377888999999999999
Q ss_pred CccEEEECCCCCCC---CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC
Q 022386 89 KLDILVNAAAGNFL---VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (298)
Q Consensus 89 ~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~ 165 (298)
++|++|||||.... .++.+.+.++|++.+++|+.++++++++++|+|++++ .|+||++||..+..+.+.
T Consensus 72 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~--------~g~iv~isS~~~~~~~~~ 143 (244)
T 1zmo_A 72 AIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAG--------GASVIFITSSVGKKPLAY 143 (244)
T ss_dssp CEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--------CEEEEEECCGGGTSCCTT
T ss_pred CCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--------CcEEEEECChhhCCCCCC
Confidence 99999999998776 7888899999999999999999999999999998865 699999999999999889
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcc---cCcCChHHHHHHHhh-hccCCCCCCHHHHHHHHH
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG---VSKLAPEEIRSKATD-YMAAYKFGEKWDIAMAAL 241 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~dva~~~~ 241 (298)
...|++||++++.|+++++.|++ ++||+||+|+||+++|++. ... ..++....... ..|.+++.+|+|+|+.++
T Consensus 144 ~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~p~~r~~~pe~vA~~v~ 221 (244)
T 1zmo_A 144 NPLYGPARAATVALVESAAKTLS-RDGILLYAIGPNFFNNPTYFPTSDW-ENNPELRERVDRDVPLGRLGRPDEMGALIT 221 (244)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBCBTTTBCHHHH-HHCHHHHHHHHHHCTTCSCBCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHh-hcCcEEEEEeeCCCcCCcccccccc-cchHHHHHHHhcCCCCCCCcCHHHHHHHHH
Confidence 99999999999999999999998 7899999999999999865 221 11122233334 578889999999999999
Q ss_pred HhcCCCCCCccccEEEeCCCCC
Q 022386 242 YLASDAGKYVNGNTLIVDGGNW 263 (298)
Q Consensus 242 ~L~s~~~~~~~G~~i~~dgG~~ 263 (298)
||+++.+.++||+.|.+|||.+
T Consensus 222 ~l~s~~~~~~tG~~i~vdgG~~ 243 (244)
T 1zmo_A 222 FLASRRAAPIVGQFFAFTGGYL 243 (244)
T ss_dssp HHHTTTTGGGTTCEEEESTTCC
T ss_pred HHcCccccCccCCEEEeCCCCC
Confidence 9999999999999999999953
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=299.05 Aligned_cols=249 Identities=22% Similarity=0.394 Sum_probs=215.3
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHh-CCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
...+|++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.+ .+.++.++.||++|+++++++++.+.
T Consensus 8 ~~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 87 (265)
T 1h5q_A 8 FTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQID 87 (265)
T ss_dssp EEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHH
Confidence 34468899999999999999999999999999999999976665555555543 36679999999999999999999999
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~ 164 (298)
+.++++|++|||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++. .++||++||..+..+.+
T Consensus 88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~ 160 (265)
T 1h5q_A 88 ADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQ-------KGSIVVTSSMSSQIINQ 160 (265)
T ss_dssp HHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-------CEEEEEECCGGGTSCCE
T ss_pred HhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCC-------CceEEEeCCchhhcccc
Confidence 99999999999999877777778899999999999999999999999999987531 38899999988776553
Q ss_pred C-------chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHH
Q 022386 165 Y-------QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA 237 (298)
Q Consensus 165 ~-------~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva 237 (298)
. ...|++||++++.++++++.|++ ++||+++.|+||+++|++.... .++.........+.+++.+|+|+|
T Consensus 161 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva 237 (265)
T 1h5q_A 161 SSLNGSLTQVFYNSSKAACSNLVKGLAAEWA-SAGIRVNALSPGYVNTDQTAHM--DKKIRDHQASNIPLNRFAQPEEMT 237 (265)
T ss_dssp EETTEECSCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCGGGGGS--CHHHHHHHHHTCTTSSCBCGGGGH
T ss_pred ccccccccccccHHHHHHHHHHHHHHHHHHH-hcCcEEEEEecCcccccccccc--chhHHHHHHhcCcccCCCCHHHHH
Confidence 2 67899999999999999999997 7799999999999998865432 233444555667888899999999
Q ss_pred HHHHHhcCCCCCCccccEEEeCCCCCC
Q 022386 238 MAALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 238 ~~~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
+.+++|+++.+.+++|+.+.+|||..+
T Consensus 238 ~~~~~l~~~~~~~~~G~~~~v~gG~~~ 264 (265)
T 1h5q_A 238 GQAILLLSDHATYMTGGEYFIDGGQLI 264 (265)
T ss_dssp HHHHHHHSGGGTTCCSCEEEECTTGGG
T ss_pred HHHHhhccCchhcCcCcEEEecCCEeC
Confidence 999999999889999999999999754
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-43 Score=303.87 Aligned_cols=247 Identities=26% Similarity=0.300 Sum_probs=202.3
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCC-eEEEEccCCCHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP-AIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~-~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
..+|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.+.+ +.+++||++|+++++++++++.+
T Consensus 28 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 107 (281)
T 4dry_A 28 KGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRA 107 (281)
T ss_dssp ------CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 44689999999999999999999999999999999999999888888888765444 58999999999999999999999
Q ss_pred HhCCccEEEECCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC
Q 022386 86 HFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~ 164 (298)
.++++|++|||||+... .++.+.+.++|++.+++|+.++++++++++|.|++++. .+|+||++||..+..+.+
T Consensus 108 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~------~~g~IV~isS~~~~~~~~ 181 (281)
T 4dry_A 108 EFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTP------RGGRIINNGSISAQTPRP 181 (281)
T ss_dssp HHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSS------CCEEEEEECCGGGTCCCT
T ss_pred HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC------CCcEEEEECCHHhCCCCC
Confidence 99999999999998644 67888999999999999999999999999999987631 158999999999999999
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhc
Q 022386 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (298)
Q Consensus 165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~ 244 (298)
....|++||+|++.|+++++.|++ ++||+||+|+||+++|++........ .......+..++.+|+|+|++++||+
T Consensus 182 ~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~~~~~pedvA~~v~fL~ 257 (281)
T 4dry_A 182 NSAPYTATKHAITGLTKSTALDGR-MHDIACGQIDIGNAATDMTARMSTGV---LQANGEVAAEPTIPIEHIAEAVVYMA 257 (281)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEECBCC-------CEE---ECTTSCEEECCCBCHHHHHHHHHHHH
T ss_pred CChhHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEECcCcChhhhhhcchh---hhhhhcccccCCCCHHHHHHHHHHHh
Confidence 999999999999999999999998 88999999999999998654322110 01112345677899999999999999
Q ss_pred CCC-CCCccccEEEeCCCCC
Q 022386 245 SDA-GKYVNGNTLIVDGGNW 263 (298)
Q Consensus 245 s~~-~~~~~G~~i~~dgG~~ 263 (298)
+.+ ...+++..|.-....+
T Consensus 258 s~~~~~~i~~~~i~p~~~~~ 277 (281)
T 4dry_A 258 SLPLSANVLTMTVMATRMPL 277 (281)
T ss_dssp HSCTTEEEEEEEEEETTSSC
T ss_pred CCCccCccccEEEEeccccc
Confidence 865 4455555555544433
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-42 Score=297.76 Aligned_cols=248 Identities=28% Similarity=0.399 Sum_probs=210.2
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCC-------CCeEEEEccCCCHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-------IPAIGLEGDVRKREDAVRVV 80 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~Dls~~~~~~~~~ 80 (298)
.+|++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+ .++.++.+|++|++++++++
T Consensus 3 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 82 (264)
T 2pd6_A 3 NRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLL 82 (264)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHH
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHH
Confidence 45789999999999999999999999999999999999888777766665544 57889999999999999999
Q ss_pred HHHHHHhCCc-cEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 81 ESTINHFGKL-DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 81 ~~~~~~~~~i-d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
+.+.+.++++ |++|||||.....++.+.+.++|++.+++|+.+++++++++.|.|.+++. .|+||++||..+
T Consensus 83 ~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-------~g~iv~isS~~~ 155 (264)
T 2pd6_A 83 EQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGC-------RGSIINISSIVG 155 (264)
T ss_dssp HHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-------CEEEEEECCTHH
T ss_pred HHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCC-------CceEEEECChhh
Confidence 9999999999 99999999877777778899999999999999999999999999987531 378999999998
Q ss_pred ccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHH
Q 022386 160 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239 (298)
Q Consensus 160 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (298)
..+.++...|++||++++.+++.++.|++ ++||++++|+||++.|++.... .++....+....+.+++.+|+|+|++
T Consensus 156 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~ 232 (264)
T 2pd6_A 156 KVGNVGQTNYAASKAGVIGLTQTAARELG-RHGIRCNSVLPGFIATPMTQKV--PQKVVDKITEMIPMGHLGDPEDVADV 232 (264)
T ss_dssp HHCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSCC------------CTGGGCTTCSCBCHHHHHHH
T ss_pred ccCCCCChhhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeecccccchhhc--CHHHHHHHHHhCCCCCCCCHHHHHHH
Confidence 88888899999999999999999999997 7799999999999998864321 22333444455677889999999999
Q ss_pred HHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 240 ALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 240 ~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
+.+++++.+.+++|+.+.+|||..+.
T Consensus 233 ~~~l~~~~~~~~~G~~~~v~gg~~~~ 258 (264)
T 2pd6_A 233 VAFLASEDSGYITGTSVEVTGGLFMA 258 (264)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTC---
T ss_pred HHHHcCCcccCCCCCEEEECCCceec
Confidence 99999988889999999999998764
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-42 Score=295.98 Aligned_cols=248 Identities=22% Similarity=0.324 Sum_probs=208.5
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
++|++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++ +.++.++.+|++|+++++++++++.+.+
T Consensus 8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (265)
T 2o23_A 8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKGKF 84 (265)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 4688999999999999999999999999999999999988777766665 5678999999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCC------CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc
Q 022386 88 GKLDILVNAAAGNFLVPAE------DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 161 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~ 161 (298)
+++|++|||||.....++. +.+.++|++.+++|+.+++++++++.|.|+++... .....++||++||..+..
T Consensus 85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~--~~~~~~~iv~isS~~~~~ 162 (265)
T 2o23_A 85 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPD--QGGQRGVIINTASVAAFE 162 (265)
T ss_dssp SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCC--TTSCCEEEEEECCTHHHH
T ss_pred CCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccc--cCCCCcEEEEeCChhhcC
Confidence 9999999999976554443 36889999999999999999999999999875210 011268999999999988
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccC-CCCCCHHHHHHHH
Q 022386 162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA-YKFGEKWDIAMAA 240 (298)
Q Consensus 162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~ 240 (298)
+.+....|++||++++.++++++.|++ ++||+||+|+||+++|++.... +++.........+. +++.+|+|+|+.+
T Consensus 163 ~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~ 239 (265)
T 2o23_A 163 GQVGQAAYSASKGGIVGMTLPIARDLA-PIGIRVMTIAPGLFGTPLLTSL--PEKVCNFLASQVPFPSRLGDPAEYAHLV 239 (265)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCCC------------CHHHHTCSSSCSCBCHHHHHHHH
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEEeccccCcccccc--CHHHHHHHHHcCCCcCCCCCHHHHHHHH
Confidence 888899999999999999999999997 7799999999999998864321 22223334455676 7899999999999
Q ss_pred HHhcCCCCCCccccEEEeCCCCCCC
Q 022386 241 LYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 241 ~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
++|++ +.+++|+.|.+|||.++.
T Consensus 240 ~~l~~--~~~~~G~~i~vdgG~~~~ 262 (265)
T 2o23_A 240 QAIIE--NPFLNGEVIRLDGAIRMQ 262 (265)
T ss_dssp HHHHH--CTTCCSCEEEESTTCCCC
T ss_pred HHHhh--cCccCceEEEECCCEecC
Confidence 99995 478999999999998764
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-42 Score=290.32 Aligned_cols=232 Identities=23% Similarity=0.289 Sum_probs=207.2
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHH-hCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH-SLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++. ..+.++.+++||++|+++++++++++.+.+++
T Consensus 1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 80 (235)
T 3l77_A 1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD 80 (235)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence 47999999999999999999999999999999999998888888886 45778999999999999999999999999999
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhh
Q 022386 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 169 (298)
Q Consensus 90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y 169 (298)
+|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|.++ ++++|+++|..+..+.+....|
T Consensus 81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~---------~~~ii~~sS~~~~~~~~~~~~Y 151 (235)
T 3l77_A 81 VDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRT---------GGLALVTTSDVSARLIPYGGGY 151 (235)
T ss_dssp CSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---------TCEEEEECCGGGSSCCTTCHHH
T ss_pred CCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---------CCcEEEEecchhcccCCCcchH
Confidence 9999999999888888999999999999999999999999999999654 4889999999999888899999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCCC
Q 022386 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK 249 (298)
Q Consensus 170 ~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~ 249 (298)
++||++++.|++++..+ ..||+||+|+||+++|++........ ...++.+|+|+|+++.||++++..
T Consensus 152 ~~sKaa~~~~~~~l~~~---~~~i~v~~v~PG~v~T~~~~~~~~~~----------~~~~~~~p~dva~~v~~l~~~~~~ 218 (235)
T 3l77_A 152 VSTKWAARALVRTFQIE---NPDVRFFELRPGAVDTYFGGSKPGKP----------KEKGYLKPDEIAEAVRCLLKLPKD 218 (235)
T ss_dssp HHHHHHHHHHHHHHHHH---CTTSEEEEEEECSBSSSTTTCCSCCC----------GGGTCBCHHHHHHHHHHHHTSCTT
T ss_pred HHHHHHHHHHHHHHhhc---CCCeEEEEEeCCccccccccccCCcc----------cccCCCCHHHHHHHHHHHHcCCCC
Confidence 99999999999999555 45899999999999998754433211 122678999999999999999999
Q ss_pred CccccEEEeCCCCCC
Q 022386 250 YVNGNTLIVDGGNWL 264 (298)
Q Consensus 250 ~~~G~~i~~dgG~~~ 264 (298)
+++|+.+..|+|...
T Consensus 219 ~~~~~~~~~~~~~~~ 233 (235)
T 3l77_A 219 VRVEELMLRSVYQRP 233 (235)
T ss_dssp CCCCEEEECCTTSCC
T ss_pred CccceEEEeecccCC
Confidence 999999999999643
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-44 Score=319.20 Aligned_cols=244 Identities=22% Similarity=0.236 Sum_probs=205.9
Q ss_pred CCcEEEEecCCc--hhHHHHHHHHHHcCCcEEEEcCChh---------HHHHHHHHHHhCC---CCeEEEEccCCCH--H
Q 022386 11 KGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKT---------VLRSAVAALHSLG---IPAIGLEGDVRKR--E 74 (298)
Q Consensus 11 ~gk~~lVtG~t~--giG~~ia~~l~~~G~~Vv~~~r~~~---------~~~~~~~~~~~~~---~~~~~~~~Dls~~--~ 74 (298)
++|++||||+++ |||+++|++|+++|++|++++++.. .++.........+ ..+.++.||+++. +
T Consensus 1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~ 80 (329)
T 3lt0_A 1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN 80 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence 479999999986 9999999999999999998776642 1111111111112 2367888999888 7
Q ss_pred ------------------HHHHHHHHHHHHhCCccEEEECCCCC--CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHH
Q 022386 75 ------------------DAVRVVESTINHFGKLDILVNAAAGN--FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 134 (298)
Q Consensus 75 ------------------~~~~~~~~~~~~~~~id~li~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 134 (298)
+++++++++.+.++++|+||||||+. ...++.+.+.++|+++|++|+.++++++++++|+
T Consensus 81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~ 160 (329)
T 3lt0_A 81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI 160 (329)
T ss_dssp GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 99999999999999999999999974 3577888999999999999999999999999999
Q ss_pred HHhcCCCCCCCCCCcEEEEecccccccCCCCch-hhHHHHHHHHHHHHHHHHHhcCC-CCeEEEEEeCCcccCCcccCcC
Q 022386 135 LKKGGRGQASSSSGGIIINISATLHYTATWYQI-HVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTAGVSKL 212 (298)
Q Consensus 135 ~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~-~Y~~sK~a~~~l~~~la~e~~~~-~girv~~i~PG~v~t~~~~~~~ 212 (298)
|++ +|+||++||..+..+.+... .|++||+|+..|+++++.|++ + +||+||+|+||+|+|++.....
T Consensus 161 m~~----------~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~-~~~gI~vn~v~PG~v~T~~~~~~~ 229 (329)
T 3lt0_A 161 MKP----------QSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLG-RNYNIRINTISAGPLKSRAATAIN 229 (329)
T ss_dssp EEE----------EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHH-HHHCCEEEEEEECCCCCHHHHTCC
T ss_pred Hhh----------CCeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhC-CccCeEEEEEecceeechhHhhhh
Confidence 976 38899999999999988885 999999999999999999997 7 7999999999999998654431
Q ss_pred C-------------------------------------------hHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCCC
Q 022386 213 A-------------------------------------------PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK 249 (298)
Q Consensus 213 ~-------------------------------------------~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~ 249 (298)
. .++..+......|.+++.+|+|+|++++||+++.++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~fL~s~~a~ 309 (329)
T 3lt0_A 230 KLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESR 309 (329)
T ss_dssp ------------------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGT
T ss_pred hhcccccccccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHHHHHHHHHHhCchhc
Confidence 1 011245566778999999999999999999999999
Q ss_pred CccccEEEeCCCCCCC
Q 022386 250 YVNGNTLIVDGGNWLS 265 (298)
Q Consensus 250 ~~~G~~i~~dgG~~~~ 265 (298)
++||+.|.+|||.++.
T Consensus 310 ~itG~~i~vdGG~~~~ 325 (329)
T 3lt0_A 310 AITGQTIYVDNGLNIM 325 (329)
T ss_dssp TCCSCEEEESTTGGGC
T ss_pred cccCcEEEEcCCeeEE
Confidence 9999999999999874
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-43 Score=299.03 Aligned_cols=235 Identities=18% Similarity=0.257 Sum_probs=205.8
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
|++|||||++|||++++++|+++|++|++++|+.+.+++..+ +...+.++.++ |.++++++++++.+.++++|+
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~~~~~~-----d~~~v~~~~~~~~~~~g~iD~ 75 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYPQLKPM-----SEQEPAELIEAVTSAYGQVDV 75 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCTTSEEC-----CCCSHHHHHHHHHHHHSCCCE
T ss_pred eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCCcEEEE-----CHHHHHHHHHHHHHHhCCCCE
Confidence 689999999999999999999999999999999887777665 65556565544 667888999999999999999
Q ss_pred EEECCCCC-CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHH
Q 022386 93 LVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (298)
Q Consensus 93 li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~ 171 (298)
+|||||.. ...++.+.+.++|++.+++|+.++++++++++|+|++++ .|+||++||..+..+.+....|++
T Consensus 76 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~ 147 (254)
T 1zmt_A 76 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK--------SGHIIFITSATPFGPWKELSTYTS 147 (254)
T ss_dssp EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CCEEEEECCSTTTSCCTTCHHHHH
T ss_pred EEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--------CcEEEEECCcccccCCCCchHHHH
Confidence 99999987 667788889999999999999999999999999998765 689999999999999889999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcc---------cCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHH
Q 022386 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPI---------KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (298)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~girv~~i~PG~v---------~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 242 (298)
||++++.|+++++.|++ ++||+||+|+||++ +|++... .++....+....+.+++.+|+|+|+.++|
T Consensus 148 sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~---~~~~~~~~~~~~p~~~~~~p~dvA~~v~~ 223 (254)
T 1zmt_A 148 ARAGACTLANALSKELG-EYNIPVFAIGPNYLHSEDSPYFYPTEPWKT---NPEHVAHVKKVTALQRLGTQKELGELVAF 223 (254)
T ss_dssp HHHHHHHHHHHHHHHHG-GGTCCEEEEEESSBCCBTCCSSCBHHHHTT---CHHHHHHHHHHSSSSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhh-hcCcEEEEEecCccccccccccCCCccccc---ChHHHHHHhccCCCCCCcCHHHHHHHHHH
Confidence 99999999999999998 78999999999999 6654322 12334445556788899999999999999
Q ss_pred hcCCCCCCccccEEEeCCCCCCC
Q 022386 243 LASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 243 L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
|+++.+.+++|+.|.+|||....
T Consensus 224 l~s~~~~~~tG~~~~vdgG~~~~ 246 (254)
T 1zmt_A 224 LASGSCDYLTGQVFWLAGGFPMI 246 (254)
T ss_dssp HHTTSCGGGTTCEEEESTTCCCC
T ss_pred HhCcccCCccCCEEEECCCchhh
Confidence 99998999999999999997753
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-41 Score=292.17 Aligned_cols=250 Identities=27% Similarity=0.328 Sum_probs=214.9
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
...+|++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.. ..++.++.+|++|+++++++++++.+
T Consensus 10 ~~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~ 88 (278)
T 2bgk_A 10 STNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS-PDVISFVHCDVTKDEDVRNLVDTTIA 88 (278)
T ss_dssp -CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CcccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC-CCceEEEECCCCCHHHHHHHHHHHHH
Confidence 34568999999999999999999999999999999999998777766666633 23789999999999999999999999
Q ss_pred HhCCccEEEECCCCCC--CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 86 HFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 86 ~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
.++++|++|||||... ..++.+.+.++|++.+++|+.++++++++++|.|.+++ .++||++||..++.+.
T Consensus 89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~ 160 (278)
T 2bgk_A 89 KHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK--------KGSIVFTASISSFTAG 160 (278)
T ss_dssp HHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT--------CEEEEEECCGGGTCCC
T ss_pred HcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC--------CCeEEEEeeccccCCC
Confidence 9999999999999753 35677889999999999999999999999999998765 6899999999998887
Q ss_pred C-CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC-hHHHHHHHhhh--ccCCCCCCHHHHHHH
Q 022386 164 W-YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDY--MAAYKFGEKWDIAMA 239 (298)
Q Consensus 164 ~-~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~dva~~ 239 (298)
+ ....|++||++++.+++.++.|++ ++||+++.|+||+++|++...... .++....+... .+.+++.+|+|+|++
T Consensus 161 ~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (278)
T 2bgk_A 161 EGVSHVYTATKHAVLGLTTSLCTELG-EYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADA 239 (278)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHH
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHh-hcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHHHHHHH
Confidence 7 788999999999999999999997 779999999999999987544322 22333333222 245779999999999
Q ss_pred HHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 240 ALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 240 ~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
+++|+++.+.+++|+.+.+|||..++
T Consensus 240 ~~~l~~~~~~~~~G~~~~v~gg~~~~ 265 (278)
T 2bgk_A 240 VAYLAGDESKYVSGLNLVIDGGYTRT 265 (278)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred HHHHcCcccccCCCCEEEECCccccc
Confidence 99999988889999999999998775
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-42 Score=298.98 Aligned_cols=242 Identities=22% Similarity=0.264 Sum_probs=200.5
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH-h
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH-F 87 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~-~ 87 (298)
+|+||++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.||++|+++++++++.+.+. +
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~ 81 (260)
T 2qq5_A 2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQ 81 (260)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 578999999999999999999999999999999999998888888888776778999999999999999999999886 8
Q ss_pred CCccEEEECCCC--C-----CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc
Q 022386 88 GKLDILVNAAAG--N-----FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 160 (298)
Q Consensus 88 ~~id~li~~ag~--~-----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~ 160 (298)
+++|++|||||. . ...++.+.+.++|++.+++|+.+++++++.++|.|.+++ .|+||++||..+.
T Consensus 82 g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~ 153 (260)
T 2qq5_A 82 GRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAG--------QGLIVVISSPGSL 153 (260)
T ss_dssp TCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGT--------CCEEEEECCGGGT
T ss_pred CCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcC--------CcEEEEEcChhhc
Confidence 999999999953 2 246677888899999999999999999999999998765 6899999999887
Q ss_pred cCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHH-HH-Hh-hhccCCCCCCHHHHH
Q 022386 161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR-SK-AT-DYMAAYKFGEKWDIA 237 (298)
Q Consensus 161 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~-~~-~~-~~~~~~~~~~~~dva 237 (298)
.+. ....|++||++++.|+++++.|++ ++||+||+|+||+++|++.......++.. .. .. ...+.++..+|+|+|
T Consensus 154 ~~~-~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va 231 (260)
T 2qq5_A 154 QYM-FNVPYGVGKAACDKLAADCAHELR-RHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSG 231 (260)
T ss_dssp SCC-SSHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEECCCSCTTTC----------------------CHHHHHHHHH
T ss_pred CCC-CCCchHHHHHHHHHHHHHHHHHhc-cCCeEEEEEecCccccHHHHHhhccccccchhHHHHHHhhhccCCCHHHHH
Confidence 654 467899999999999999999998 78999999999999998754322111110 00 11 122445567999999
Q ss_pred HHHHHhcCCCC-CCccccEEEeCC
Q 022386 238 MAALYLASDAG-KYVNGNTLIVDG 260 (298)
Q Consensus 238 ~~~~~L~s~~~-~~~~G~~i~~dg 260 (298)
+.++||+++.+ .++||+.|.+|+
T Consensus 232 ~~v~~l~s~~~~~~itG~~i~~~~ 255 (260)
T 2qq5_A 232 KCVVALATDPNILSLSGKVLPSCD 255 (260)
T ss_dssp HHHHHHHTCTTGGGGTTCEEEHHH
T ss_pred HHHHHHhcCcccccccceeechhh
Confidence 99999999876 489999998763
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-42 Score=290.97 Aligned_cols=241 Identities=27% Similarity=0.363 Sum_probs=208.0
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
++|++|+++||||++|||++++++|+++|++|++++|+.+.++++.+++. .+.++.+|++|+++++++++ .+
T Consensus 3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~----~~ 74 (244)
T 3d3w_A 3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----GIEPVCVDLGDWEATERALG----SV 74 (244)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHT----TC
T ss_pred cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC----CCCEEEEeCCCHHHHHHHHH----Hc
Confidence 46899999999999999999999999999999999999877666554432 35677999999999998876 56
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
+++|++|||||.....++.+.+.++|++.+++|+.+++++++++.+.|.+++. .++||++||..+..+.+...
T Consensus 75 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~ 147 (244)
T 3d3w_A 75 GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGV-------PGAIVNVSSQCSQRAVTNHS 147 (244)
T ss_dssp CCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-------CEEEEEECCGGGTSCCTTBH
T ss_pred CCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC-------CcEEEEeCchhhccCCCCCc
Confidence 89999999999877677778899999999999999999999999999987531 38899999999998888899
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~ 247 (298)
.|++||++++.+++.++.|++ ++||+++.|+||++.|++.......+.....+....+.+++.+|+|+|+++++|+++.
T Consensus 148 ~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 226 (244)
T 3d3w_A 148 VYCSTKGALDMLTKVMALELG-PHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDR 226 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred hHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEeccccccchhhhccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCcc
Confidence 999999999999999999997 7799999999999998865433222333344555678889999999999999999988
Q ss_pred CCCccccEEEeCCCCCC
Q 022386 248 GKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 248 ~~~~~G~~i~~dgG~~~ 264 (298)
+.+++|+.+.+|||.++
T Consensus 227 ~~~~~G~~~~v~gG~~~ 243 (244)
T 3d3w_A 227 SGMTTGSTLPVEGGFWA 243 (244)
T ss_dssp GTTCCSCEEEESTTGGG
T ss_pred ccCCCCCEEEECCCccC
Confidence 88999999999999764
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-42 Score=295.49 Aligned_cols=250 Identities=23% Similarity=0.368 Sum_probs=217.9
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCC-hhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.+|++|+++||||++|||++++++|+++|++|++++|+ .+.+++..+++...+.++.++.+|++|+++++++++++.+.
T Consensus 3 ~~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (258)
T 3afn_B 3 PDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAK 82 (258)
T ss_dssp GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 35889999999999999999999999999999999999 77888888888777778999999999999999999999999
Q ss_pred hCCccEEEECCCC-CCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc-CCC
Q 022386 87 FGKLDILVNAAAG-NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-ATW 164 (298)
Q Consensus 87 ~~~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~-~~~ 164 (298)
++++|++|||||. ....++.+.+.++|++.+++|+.++++++++++|.|.++... ....++||++||..+.. +.+
T Consensus 83 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~---~~~~~~iv~~sS~~~~~~~~~ 159 (258)
T 3afn_B 83 FGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKA---SGQTSAVISTGSIAGHTGGGP 159 (258)
T ss_dssp HSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHH---HTSCEEEEEECCTHHHHCCCT
T ss_pred cCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccC---CCCCcEEEEecchhhccCCCC
Confidence 9999999999997 566677788999999999999999999999999999754200 00137899999998877 778
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhc
Q 022386 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (298)
Q Consensus 165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~ 244 (298)
+...|++||++++.+++.++.|++ ++||+++.|+||+++|++.... .++....+....+.+++.+++|+|+++.+++
T Consensus 160 ~~~~Y~~sK~a~~~~~~~~~~e~~-~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~ 236 (258)
T 3afn_B 160 GAGLYGAAKAFLHNVHKNWVDFHT-KDGVRFNIVSPGTVDTAFHADK--TQDVRDRISNGIPMGRFGTAEEMAPAFLFFA 236 (258)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBSSGGGTTC--CHHHHHHHHTTCTTCSCBCGGGTHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHhhc-ccCeEEEEEeCCCccccccccc--CHHHHHHHhccCCCCcCCCHHHHHHHHHHHh
Confidence 889999999999999999999997 7799999999999998865432 2444455556678888999999999999999
Q ss_pred CCCCC-CccccEEEeCCCCC
Q 022386 245 SDAGK-YVNGNTLIVDGGNW 263 (298)
Q Consensus 245 s~~~~-~~~G~~i~~dgG~~ 263 (298)
++.+. +++|+.+++|||..
T Consensus 237 ~~~~~~~~~G~~~~v~gg~~ 256 (258)
T 3afn_B 237 SHLASGYITGQVLDINGGQY 256 (258)
T ss_dssp CHHHHTTCCSEEEEESTTSS
T ss_pred CcchhccccCCEEeECCCcc
Confidence 87666 89999999999964
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-42 Score=297.25 Aligned_cols=243 Identities=20% Similarity=0.248 Sum_probs=200.4
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
..+|+ |++|||||++|||++++++|+++|++|++++|+.+.++++.+++... .++.++.||++|+++++++++.+.+.
T Consensus 17 ~~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~ 94 (272)
T 2nwq_A 17 GSHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK-TRVLPLTLDVRDRAAMSAAVDNLPEE 94 (272)
T ss_dssp ----C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHTCCGG
T ss_pred CCCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC-CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 34677 99999999999999999999999999999999988888887777554 57889999999999999999999999
Q ss_pred hCCccEEEECCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCc-EEEEecccccccCCC
Q 022386 87 FGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGG-IIINISATLHYTATW 164 (298)
Q Consensus 87 ~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g-~iv~vss~~~~~~~~ 164 (298)
++++|++|||||+... .++.+.+.++|++.+++|+.++++++++++|.|++++ .| +||++||..+..+.+
T Consensus 95 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~--------~g~~IV~isS~~~~~~~~ 166 (272)
T 2nwq_A 95 FATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHG--------AGASIVNLGSVAGKWPYP 166 (272)
T ss_dssp GSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC--------TTCEEEEECCGGGTSCCT
T ss_pred hCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------CCcEEEEeCCchhccCCC
Confidence 9999999999998653 7778889999999999999999999999999998765 57 999999999998888
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhc
Q 022386 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (298)
Q Consensus 165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~ 244 (298)
....|++||++++.|+++++.|++ ++||+||+|+||+++|++.......+. ...........+.+|+|+|+.++||+
T Consensus 167 ~~~~Y~asKaa~~~l~~~la~el~-~~gIrvn~v~PG~v~T~~~~~~~~~~~--~~~~~~~~~~~~~~pedvA~~v~~l~ 243 (272)
T 2nwq_A 167 GSHVYGGTKAFVEQFSLNLRCDLQ-GTGVRVTNLEPGLCESEFSLVRFGGDQ--ARYDKTYAGAHPIQPEDIAETIFWIM 243 (272)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTTCT-TSCCEEEEEEECSBC----------------------CCCCBCHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHhC-ccCeEEEEEEcCCCcCcchhcccccch--HHHHHhhccCCCCCHHHHHHHHHHHh
Confidence 899999999999999999999998 789999999999999986432211110 00111111223579999999999999
Q ss_pred CCCCCCccccEEEeCCCCC
Q 022386 245 SDAGKYVNGNTLIVDGGNW 263 (298)
Q Consensus 245 s~~~~~~~G~~i~~dgG~~ 263 (298)
++ ..+++|+.|.+++|..
T Consensus 244 s~-~~~~~g~~i~v~~~~~ 261 (272)
T 2nwq_A 244 NQ-PAHLNINSLEIMPVSQ 261 (272)
T ss_dssp TS-CTTEEEEEEEEEETTE
T ss_pred CC-CccCccceEEEeeccC
Confidence 86 5789999999999843
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-41 Score=288.55 Aligned_cols=241 Identities=30% Similarity=0.417 Sum_probs=214.9
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEE-cCChhHHHHHHHHHHhCCCCeEE-EEccCCCHHHHHHHHHHHHHHhCC
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIG-LEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~~-~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
+|+++||||++|||++++++|+++|++|+++ +|+.+.+++..+++...+.++.+ +.+|++|.++++++++++.+.+++
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG 80 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence 4799999999999999999999999999998 89988888888888777777777 899999999999999999999999
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhh
Q 022386 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 169 (298)
Q Consensus 90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y 169 (298)
+|++|||||.....++.+.+.++|++.+++|+.+++++++.++|.|++++ .++||++||..+..+.+....|
T Consensus 81 ~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~Y 152 (245)
T 2ph3_A 81 LDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKAR--------FGRIVNITSVVGILGNPGQANY 152 (245)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCTHHHHCCSSBHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC--------CCEEEEEeChhhccCCCCCcch
Confidence 99999999987767777889999999999999999999999999998765 5899999999888888889999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCCC
Q 022386 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK 249 (298)
Q Consensus 170 ~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~ 249 (298)
++||++++.++++++.|+. +.||+++.|+||+++|++... . .+..........+.+++.+++|+|+++.+++++.+.
T Consensus 153 ~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~-~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~ 229 (245)
T 2ph3_A 153 VASKAGLIGFTRAVAKEYA-QRGITVNAVAPGFIETEMTER-L-PQEVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEKAG 229 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHT-S-CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGT
T ss_pred HHHHHHHHHHHHHHHHHHH-HcCeEEEEEEEEeecCcchhh-c-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence 9999999999999999997 779999999999999876433 2 233444455566778899999999999999998888
Q ss_pred CccccEEEeCCCCC
Q 022386 250 YVNGNTLIVDGGNW 263 (298)
Q Consensus 250 ~~~G~~i~~dgG~~ 263 (298)
+++|+.+.+|||..
T Consensus 230 ~~~G~~~~v~gg~~ 243 (245)
T 2ph3_A 230 YITGQTLCVDGGLT 243 (245)
T ss_dssp TCCSCEEEESTTCS
T ss_pred cccCCEEEECCCCC
Confidence 99999999999953
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-42 Score=289.97 Aligned_cols=219 Identities=27% Similarity=0.349 Sum_probs=192.8
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
|+++++|++|||||++|||++++++|+++|++|++++|+.+ +|++|++++++++++
T Consensus 1 M~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------------~D~~~~~~v~~~~~~---- 56 (223)
T 3uce_A 1 MMGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------------LDISDEKSVYHYFET---- 56 (223)
T ss_dssp ----CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------------CCTTCHHHHHHHHHH----
T ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------------cCCCCHHHHHHHHHH----
Confidence 35688999999999999999999999999999999999864 899999999999875
Q ss_pred hCCccEEEECCCCC-CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC
Q 022386 87 FGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (298)
Q Consensus 87 ~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~ 165 (298)
++++|++|||||.. ...++.+.+.++|++.+++|+.++++++++++|+|++ +|+||++||..+..+.+.
T Consensus 57 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~----------~g~iv~~sS~~~~~~~~~ 126 (223)
T 3uce_A 57 IGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ----------GGSITLTSGMLSRKVVAN 126 (223)
T ss_dssp HCSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE----------EEEEEEECCGGGTSCCTT
T ss_pred hCCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC----------CeEEEEecchhhccCCCC
Confidence 48999999999987 5678888999999999999999999999999999965 488999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCCh--HHHHHHHhhhccCCCCCCHHHHHHHHHHh
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP--EEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~L 243 (298)
...|++||++++.|+++++.|++ + ||||+|+||+++|++....... +...+......|.+++.+|+|+|++++||
T Consensus 127 ~~~Y~asK~a~~~~~~~la~e~~-~--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l 203 (223)
T 3uce_A 127 TYVKAAINAAIEATTKVLAKELA-P--IRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAMAYLFA 203 (223)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHT-T--SEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhhc-C--cEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCCCccCHHHHHHHHHHH
Confidence 99999999999999999999997 4 9999999999999865443221 22345566778999999999999999999
Q ss_pred cCCCCCCccccEEEeCCCCCC
Q 022386 244 ASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 244 ~s~~~~~~~G~~i~~dgG~~~ 264 (298)
++ +.++||+.|.+|||..+
T Consensus 204 ~~--~~~~tG~~i~vdgG~~~ 222 (223)
T 3uce_A 204 IQ--NSYMTGTVIDVDGGALL 222 (223)
T ss_dssp HH--CTTCCSCEEEESTTGGG
T ss_pred cc--CCCCCCcEEEecCCeec
Confidence 97 47999999999999875
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-42 Score=324.03 Aligned_cols=252 Identities=23% Similarity=0.321 Sum_probs=211.6
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh---------hHHHHHHHHHHhCCCCeEEEEccCCCHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK---------TVLRSAVAALHSLGIPAIGLEGDVRKRED 75 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 75 (298)
|+..+|+||+++||||++|||+++|+.|+++|++|++++++. +.++++.+++.+.+.++ .+|++|.++
T Consensus 1 m~~~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~---~~d~~d~~~ 77 (604)
T 2et6_A 1 MSPVDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA---VADYNNVLD 77 (604)
T ss_dssp -CCCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEE---EEECCCTTC
T ss_pred CCCCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeE---EEEcCCHHH
Confidence 344578999999999999999999999999999999998764 56777778887766543 358888888
Q ss_pred HHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEec
Q 022386 76 AVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS 155 (298)
Q Consensus 76 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vs 155 (298)
++++++++.+.||++|+||||||+....++.+.+.++|+++|++|+.|+++++++++|+|++++ .|+||++|
T Consensus 78 ~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~--------~G~IVnis 149 (604)
T 2et6_A 78 GDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQK--------YGRIVNTS 149 (604)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEEC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--------CCEEEEEC
Confidence 9999999999999999999999988778888999999999999999999999999999998875 69999999
Q ss_pred ccccccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHH
Q 022386 156 ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 235 (298)
Q Consensus 156 s~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 235 (298)
|..+..+.+....|++||+|+.+|+++++.|++ ++|||||+|+|| +.|++..... +++. ....+|+|
T Consensus 150 S~ag~~~~~~~~~Y~asKaal~~lt~~la~El~-~~gIrVn~v~Pg-~~T~m~~~~~-~~~~----------~~~~~pe~ 216 (604)
T 2et6_A 150 SPAGLYGNFGQANYASAKSALLGFAETLAKEGA-KYNIKANAIAPL-ARSRMTESIM-PPPM----------LEKLGPEK 216 (604)
T ss_dssp CHHHHHCCTTBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC-CCCHHHHTTS-CHHH----------HTTCSHHH
T ss_pred CHHHcCCCCCchHHHHHHHHHHHHHHHHHHHhC-ccCeEEEEEccC-CcCccccccC-Chhh----------hccCCHHH
Confidence 999999999999999999999999999999998 889999999998 5676532221 1211 11359999
Q ss_pred HHHHHHHhcCCCCCCccccEEEeCCCCCC-------------CCCCCCchhHHHhhHHh
Q 022386 236 IAMAALYLASDAGKYVNGNTLIVDGGNWL-------------SNPRDLPKEAVNQLSRA 281 (298)
Q Consensus 236 va~~~~~L~s~~~~~~~G~~i~~dgG~~~-------------~~~~~~~~~~~~~~~~~ 281 (298)
++..++||+++. .++||+.|.+|||... ....+.++.+...+...
T Consensus 217 vA~~v~~L~s~~-~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 274 (604)
T 2et6_A 217 VAPLVLYLSSAE-NELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEI 274 (604)
T ss_dssp HHHHHHHHTSSS-CCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCc-ccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHh
Confidence 999999999998 9999999999999542 11235667776655443
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-41 Score=288.92 Aligned_cols=234 Identities=24% Similarity=0.239 Sum_probs=195.4
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
|+++||||++|||++++++|+++|++|++++|+.+.++++.+++ +.++.++.||++|+++++++++++.+.++++|+
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 77 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDI 77 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 68999999999999999999999999999999988777776666 356889999999999999999999999999999
Q ss_pred EEECCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHH
Q 022386 93 LVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (298)
Q Consensus 93 li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~ 171 (298)
+|||||+.. ..++.+.+.++|++.+++|+.++++++++++|+|++++ .|+||++||..+..+.+....|++
T Consensus 78 lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~--------~g~iv~isS~~~~~~~~~~~~Y~a 149 (248)
T 3asu_A 78 LVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN--------HGHIINIGSTAGSWPYAGGNVYGA 149 (248)
T ss_dssp EEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CCEEEEECCGGGTSCCTTCHHHHH
T ss_pred EEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--------CceEEEEccchhccCCCCCchHHH
Confidence 999999763 56777889999999999999999999999999998765 689999999999999889999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccc-CCcccCcCC-hHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCCC
Q 022386 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK-DTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK 249 (298)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~-t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~ 249 (298)
||++++.|+++++.|++ ++||+||+|+||+++ |++...... .++... .......+.+|+|+|+.++||+++ ..
T Consensus 150 sKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~---~~~~~~~~~~p~dvA~~v~~l~s~-~~ 224 (248)
T 3asu_A 150 TKAFVRQFSLNLRTDLH-GTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAE---KTYQNTVALTPEDVSEAVWWVSTL-PA 224 (248)
T ss_dssp HHHHHHHHHHHHHHHTT-TSCCEEEEEEECSBCC-------------------------CCBCHHHHHHHHHHHHHS-CT
T ss_pred HHHHHHHHHHHHHHHhh-hcCcEEEEEeccccccCcchhhcccCchHHHH---HHHhccCCCCHHHHHHHHHHHhcC-Cc
Confidence 99999999999999998 889999999999999 876432111 111111 111122346999999999999987 57
Q ss_pred CccccEEEeCCCC
Q 022386 250 YVNGNTLIVDGGN 262 (298)
Q Consensus 250 ~~~G~~i~~dgG~ 262 (298)
+++|+.+.++++.
T Consensus 225 ~~~g~~i~v~~~~ 237 (248)
T 3asu_A 225 HVNINTLEMMPVT 237 (248)
T ss_dssp TCCCCEEEECCTT
T ss_pred cceeeEEEEcccc
Confidence 8999999998873
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-42 Score=314.35 Aligned_cols=244 Identities=24% Similarity=0.312 Sum_probs=207.6
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
..++||++|||||++|||+++|++|+++|++|++++|+.. .++..+...+.+ +.++.||++|+++++++++++.+.+
T Consensus 209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~-~~~l~~~~~~~~--~~~~~~Dvtd~~~v~~~~~~~~~~~ 285 (454)
T 3u0b_A 209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGA-AEDLKRVADKVG--GTALTLDVTADDAVDKITAHVTEHH 285 (454)
T ss_dssp STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGG-HHHHHHHHHHHT--CEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCcc-HHHHHHHHHHcC--CeEEEEecCCHHHHHHHHHHHHHHc
Confidence 3578999999999999999999999999999999998743 222333333322 5688999999999999999999999
Q ss_pred CC-ccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 88 GK-LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 88 ~~-id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
++ +|++|||||+.....+.+.+.++|+++|++|+.+++++++++.+.|.+++ .++||++||..+..+.+++
T Consensus 286 g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~--------~g~iV~iSS~a~~~g~~g~ 357 (454)
T 3u0b_A 286 GGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGE--------GGRVIGLSSMAGIAGNRGQ 357 (454)
T ss_dssp TTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCT--------TCEEEEECCHHHHHCCTTC
T ss_pred CCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC--------CCEEEEEeChHhCCCCCCC
Confidence 86 99999999998888888999999999999999999999999999987654 6899999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
..|++||++++.|+++++.|++ ++||+||+|+||+++|++..... ....+......+..++.+|+|+++.+.||+++
T Consensus 358 ~~YaasKaal~~l~~~la~e~~-~~gI~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~l~r~g~pedvA~~v~fL~s~ 434 (454)
T 3u0b_A 358 TNYATTKAGMIGLAEALAPVLA-DKGITINAVAPGFIETKMTEAIP--LATREVGRRLNSLFQGGQPVDVAELIAYFASP 434 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEECSBCC------------CHHHHHSBTTSSCBCHHHHHHHHHHHHCG
T ss_pred HHHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEEcCcccChhhhhcc--hhhHHHHHhhccccCCCCHHHHHHHHHHHhCC
Confidence 9999999999999999999998 78999999999999998654321 11222334456788899999999999999999
Q ss_pred CCCCccccEEEeCCCCCCC
Q 022386 247 AGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 247 ~~~~~~G~~i~~dgG~~~~ 265 (298)
.+.++||++|.+|||.++.
T Consensus 435 ~a~~itG~~i~vdGG~~lG 453 (454)
T 3u0b_A 435 ASNAVTGNTIRVCGQAMLG 453 (454)
T ss_dssp GGTTCCSCEEEESSSBSCC
T ss_pred ccCCCCCcEEEECCccccc
Confidence 9999999999999998763
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-41 Score=291.20 Aligned_cols=244 Identities=27% Similarity=0.462 Sum_probs=216.8
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcC-ChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
++|++|+++||||++|||++++++|+++|++|++++| +.+.+++..+++.+.+.++.++.+|++|+++++++++++.+.
T Consensus 17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 96 (274)
T 1ja9_A 17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH 96 (274)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 4688999999999999999999999999999999999 777777788888777788999999999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc-cCCCC
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWY 165 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~-~~~~~ 165 (298)
++++|++|||||.....++.+.+.++|++.+++|+.+++++++++++.|++ +++||++||..+. .+.+.
T Consensus 97 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~----------~~~iv~~sS~~~~~~~~~~ 166 (274)
T 1ja9_A 97 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR----------GGRIILTSSIAAVMTGIPN 166 (274)
T ss_dssp HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE----------EEEEEEECCGGGTCCSCCS
T ss_pred cCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh----------CCEEEEEcChHhccCCCCC
Confidence 999999999999877777778899999999999999999999999999872 4789999999888 77788
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccC-----------cCChHHHHHHHhhhccCCCCCCHH
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS-----------KLAPEEIRSKATDYMAAYKFGEKW 234 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~ 234 (298)
...|++||++++.+++.++.|++ +.||+++.|+||++.|++... ....++....+....+.+++.+++
T Consensus 167 ~~~Y~~sK~a~~~~~~~~~~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (274)
T 1ja9_A 167 HALYAGSKAAVEGFCRAFAVDCG-AKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPA 245 (274)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHH
T ss_pred CchHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCCCccCHH
Confidence 89999999999999999999997 779999999999999875431 122144445555667888899999
Q ss_pred HHHHHHHHhcCCCCCCccccEEEeCCCC
Q 022386 235 DIAMAALYLASDAGKYVNGNTLIVDGGN 262 (298)
Q Consensus 235 dva~~~~~L~s~~~~~~~G~~i~~dgG~ 262 (298)
|+|+++.+|+++.+.+++|+.+++|||.
T Consensus 246 dva~~i~~l~~~~~~~~~G~~~~v~gG~ 273 (274)
T 1ja9_A 246 DIGRAVSALCQEESEWINGQVIKLTGGG 273 (274)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHHHHHHHhCcccccccCcEEEecCCc
Confidence 9999999999988889999999999995
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-41 Score=322.35 Aligned_cols=251 Identities=25% Similarity=0.335 Sum_probs=211.3
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
.+|+||+++||||++|||+++|+.|+++|++|++++++. .+++.+++.+.+.++..+.+|++ ++.+++++++.++|
T Consensus 318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~g~~~~~~~~Dv~--~~~~~~~~~~~~~~ 393 (604)
T 2et6_A 318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAAGGEAWPDQHDVA--KDSEAIIKNVIDKY 393 (604)
T ss_dssp CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHTTCEEEEECCCHH--HHHHHHHHHHHHHH
T ss_pred cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhcCCeEEEEEcChH--HHHHHHHHHHHHhc
Confidence 478999999999999999999999999999999998743 35566777777777888888884 55678899999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
|++|+||||||+....++.+.+.++|+++|++|+.|+++++++++|+|++++ +|+||++||..+..+.+...
T Consensus 394 G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~--------~G~IVnisS~ag~~~~~~~~ 465 (604)
T 2et6_A 394 GTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQ--------FGRIINITSTSGIYGNFGQA 465 (604)
T ss_dssp SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--------CEEEEEECCHHHHSCCTTBH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--------CCEEEEECChhhccCCCCCh
Confidence 9999999999988778888999999999999999999999999999998865 69999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~ 247 (298)
.|++||+|+.+|+++++.|++ ++|||||+|+||+ .|++..... +++ .....+|+|+|+.++||+++.
T Consensus 466 ~Y~asKaal~~lt~~la~El~-~~gIrVn~v~PG~-~T~m~~~~~-~~~----------~~~~~~pe~vA~~v~~L~s~~ 532 (604)
T 2et6_A 466 NYSSSKAGILGLSKTMAIEGA-KNNIKVNIVAPHA-ETAMTLSIM-REQ----------DKNLYHADQVAPLLVYLGTDD 532 (604)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECC-CCCC--------------------CCSSCGGGTHHHHHHTTSTT
T ss_pred hHHHHHHHHHHHHHHHHHHhC-ccCeEEEEEcCCC-CCccccccC-chh----------hccCCCHHHHHHHHHHHhCCc
Confidence 999999999999999999998 8899999999995 777643221 111 123569999999999999998
Q ss_pred CCCccccEEEeCCCCCCC------------CCCCCchhHHHhhHHhhhh
Q 022386 248 GKYVNGNTLIVDGGNWLS------------NPRDLPKEAVNQLSRAVER 284 (298)
Q Consensus 248 ~~~~~G~~i~~dgG~~~~------------~~~~~~~~~~~~~~~~~~~ 284 (298)
+. +||+.|.+|||.... ...+.++.+...+..+...
T Consensus 533 ~~-itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 580 (604)
T 2et6_A 533 VP-VTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEITDF 580 (604)
T ss_dssp CC-CCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHTCC
T ss_pred cC-CCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHhcc
Confidence 88 999999999996541 1236777777766665544
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-41 Score=284.76 Aligned_cols=241 Identities=25% Similarity=0.323 Sum_probs=208.5
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
.+|++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++ ..+.++.+|++|+++++++++ .+
T Consensus 3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~----~~ 74 (244)
T 1cyd_A 3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----PGIEPVCVDLGDWDATEKALG----GI 74 (244)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHT----TC
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----cCCCcEEecCCCHHHHHHHHH----Hc
Confidence 4688999999999999999999999999999999999987666554432 236677999999999998877 56
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
+++|++|||||.....++.+.+.++|++.+++|+.+++++++++++.|.+++. .++||++||..++.+.+...
T Consensus 75 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~ 147 (244)
T 1cyd_A 75 GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGV-------PGSIVNVSSMVAHVTFPNLI 147 (244)
T ss_dssp CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-------CEEEEEECCGGGTSCCTTBH
T ss_pred CCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCC-------CeEEEEEcchhhcCCCCCcc
Confidence 89999999999877677778899999999999999999999999999987531 38899999999998888899
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~ 247 (298)
.|++||++++.+++.++.|++ ++||+++.|+||++.|++.......+.....+....+.+++.+++|+|+++++|++++
T Consensus 148 ~Y~~sK~a~~~~~~~~a~~~~-~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~ 226 (244)
T 1cyd_A 148 TYSSTKGAMTMLTKAMAMELG-PHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDR 226 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred hhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecCcccCccccccccCHHHHHHHHhcCCccCCCCHHHHHHHHHHHhCch
Confidence 999999999999999999997 7799999999999998764432233444455556678889999999999999999988
Q ss_pred CCCccccEEEeCCCCCC
Q 022386 248 GKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 248 ~~~~~G~~i~~dgG~~~ 264 (298)
+.+++|+.+.+|||..+
T Consensus 227 ~~~~~G~~~~v~gG~~~ 243 (244)
T 1cyd_A 227 SASTSGGGILVDAGYLA 243 (244)
T ss_dssp GTTCCSSEEEESTTGGG
T ss_pred hhcccCCEEEECCCccC
Confidence 88999999999999754
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-42 Score=303.27 Aligned_cols=250 Identities=25% Similarity=0.257 Sum_probs=198.8
Q ss_pred CCCCCCCCCcEEEEecC--CchhHHHHHHHHHHcCCcEEEEcCChh------HHH-HHHHHHHhC--CCC---eEEEEcc
Q 022386 4 PFKGDILKGKVALLTGG--GSGIGFEISLQLGKHGAAIAIMGRRKT------VLR-SAVAALHSL--GIP---AIGLEGD 69 (298)
Q Consensus 4 ~~~~~~l~gk~~lVtG~--t~giG~~ia~~l~~~G~~Vv~~~r~~~------~~~-~~~~~~~~~--~~~---~~~~~~D 69 (298)
+|+.++|+||++||||| ++|||++++++|+++|++|++++|+.. ... +..+.+.+. +.. +.++.+|
T Consensus 1 ~M~~~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 80 (315)
T 2o2s_A 1 SAFPIDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLD 80 (315)
T ss_dssp ---CCCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECC
T ss_pred CCCcccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhcccccccccccccc
Confidence 35556789999999999 899999999999999999999987631 000 001112211 111 2344443
Q ss_pred ------------CC--------CHHHHHHHHHHHHHHhCCccEEEECCCCCC--CCCCCCCCHHHHHHHHHhhhHHHHHH
Q 022386 70 ------------VR--------KREDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIM 127 (298)
Q Consensus 70 ------------ls--------~~~~~~~~~~~~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l 127 (298)
++ |+++++++++++.+.|+++|+||||||+.. ..++.+.+.++|++.+++|+.+++++
T Consensus 81 ~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l 160 (315)
T 2o2s_A 81 AAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSL 160 (315)
T ss_dssp TTCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred ccccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHH
Confidence 33 256899999999999999999999999753 46777889999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc-hhhHHHHHHHHHHHHHHHHHhcCC-CCeEEEEEeCCcccC
Q 022386 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ-IHVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKD 205 (298)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~-~~Y~~sK~a~~~l~~~la~e~~~~-~girv~~i~PG~v~t 205 (298)
+++++|+|++ +|+||++||..+..+.+.. ..|++||+|+..|+++++.|++ + +|||||+|+||+++|
T Consensus 161 ~~~~~~~m~~----------~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~~gIrvn~v~PG~v~T 229 (315)
T 2o2s_A 161 LQHFGPIMNE----------GGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAG-QKYGVRVNAISAGPLKS 229 (315)
T ss_dssp HHHHSTTEEE----------EEEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHH-HHTCCEEEEEEECCCCC
T ss_pred HHHHHHHHhc----------CCEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhC-cccCeEEEEEecccccc
Confidence 9999999964 4889999999998888777 5899999999999999999996 4 799999999999999
Q ss_pred CcccCcCC--h----HHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCC
Q 022386 206 TAGVSKLA--P----EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 206 ~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
++...... . ++.........|.+++.+|+|+|+.++||+++.+.++||+.|.+|||.++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~ 294 (315)
T 2o2s_A 230 RAASAIGKSGEKSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLHA 294 (315)
T ss_dssp HHHHHTTCSSSSCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred hhhhhccccccchhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCeee
Confidence 76432110 0 22223344557889999999999999999999899999999999999876
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-40 Score=281.71 Aligned_cols=234 Identities=18% Similarity=0.235 Sum_probs=211.2
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCC-------cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHH
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGA-------AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~-------~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
++|+++||||++|||++++++|+++|+ +|++++|+.+.++++.+++...+.++.++.+|++|+++++++++++
T Consensus 1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 80 (244)
T 2bd0_A 1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHI 80 (244)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHH
Confidence 378999999999999999999999999 8999999988888888888777778999999999999999999999
Q ss_pred HHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
.+.++++|++|||||.....++.+.+.++|++.+++|+.++++++++++|+|++++ .++||++||..+..+.
T Consensus 81 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~ 152 (244)
T 2bd0_A 81 VERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH--------SGHIFFITSVAATKAF 152 (244)
T ss_dssp HHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCC
T ss_pred HHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC--------CCEEEEEecchhcCCC
Confidence 99999999999999987777777889999999999999999999999999998765 6899999999999888
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHh
Q 022386 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (298)
Q Consensus 164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L 243 (298)
+....|++||++++.++++++.|+. ++||+++.|+||+++|++..... .+. ..++.+|+|+|+.++++
T Consensus 153 ~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~-~~~----------~~~~~~~~dva~~~~~l 220 (244)
T 2bd0_A 153 RHSSIYCMSKFGQRGLVETMRLYAR-KCNVRITDVQPGAVYTPMWGKVD-DEM----------QALMMMPEDIAAPVVQA 220 (244)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHT-TTTEEEEEEEECCBCSTTTCCCC-STT----------GGGSBCHHHHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhh-ccCcEEEEEECCCccchhhhhcc-ccc----------cccCCCHHHHHHHHHHH
Confidence 8899999999999999999999997 78999999999999998654321 111 12578999999999999
Q ss_pred cCCCCCCccccEEEeCCCCCC
Q 022386 244 ASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 244 ~s~~~~~~~G~~i~~dgG~~~ 264 (298)
++++..+++|+.+..+++..+
T Consensus 221 ~~~~~~~~~g~~~~~~~~~~~ 241 (244)
T 2bd0_A 221 YLQPSRTVVEEIILRPTSGDI 241 (244)
T ss_dssp HTSCTTEEEEEEEEEETTCCC
T ss_pred HhCCccccchheEEecccccc
Confidence 999999999999999998665
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-41 Score=287.34 Aligned_cols=234 Identities=24% Similarity=0.322 Sum_probs=198.3
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
.....++||+++||||++|||++++++|+++|++|++++|+.+..+ ++ + ++.++ +|+ .++++++++.+
T Consensus 12 ~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~~---~-~~~~~-~D~--~~~~~~~~~~~- 79 (249)
T 1o5i_A 12 HMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----RS---G-HRYVV-CDL--RKDLDLLFEKV- 79 (249)
T ss_dssp ----CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HT---C-SEEEE-CCT--TTCHHHHHHHS-
T ss_pred hHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH----hh---C-CeEEE-eeH--HHHHHHHHHHh-
Confidence 4556899999999999999999999999999999999999863222 22 2 57777 999 45677766654
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~ 164 (298)
.++|++|||||.....++.+.+.++|++.+++|+.+++++++.++|.|++++ .|+||++||..+..+.+
T Consensus 80 ---~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~ 148 (249)
T 1o5i_A 80 ---KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG--------WGRIVAITSFSVISPIE 148 (249)
T ss_dssp ---CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCT
T ss_pred ---cCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--------CcEEEEEcchHhcCCCC
Confidence 3899999999987777778889999999999999999999999999998865 68999999999999888
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHH-HHhhhccCCCCCCHHHHHHHHHHh
Q 022386 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS-KATDYMAAYKFGEKWDIAMAALYL 243 (298)
Q Consensus 165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~dva~~~~~L 243 (298)
....|++||++++.++++++.|++ ++||+||+|+||+++|++..... ++... .+....+.+++.+|+|+|+.++||
T Consensus 149 ~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l 225 (249)
T 1o5i_A 149 NLYTSNSARMALTGFLKTLSFEVA-PYGITVNCVAPGWTETERVKELL--SEEKKKQVESQIPMRRMAKPEEIASVVAFL 225 (249)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCTTHHHHS--CHHHHHHHHTTSTTSSCBCHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCCCccCcccccc--hhhHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 999999999999999999999998 78999999999999998643221 12223 444567888999999999999999
Q ss_pred cCCCCCCccccEEEeCCCCCC
Q 022386 244 ASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 244 ~s~~~~~~~G~~i~~dgG~~~ 264 (298)
+++.+.+++|+.+.+|||...
T Consensus 226 ~s~~~~~~tG~~~~vdgG~~~ 246 (249)
T 1o5i_A 226 CSEKASYLTGQTIVVDGGLSK 246 (249)
T ss_dssp HSGGGTTCCSCEEEESTTCCC
T ss_pred cCccccCCCCCEEEECCCccc
Confidence 999889999999999999765
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-42 Score=305.87 Aligned_cols=250 Identities=26% Similarity=0.250 Sum_probs=169.7
Q ss_pred CCCCCCCCcEEEEecC--CchhHHHHHHHHHHcCCcEEEEcCCh-----------hHHH-----------HHHHHHHhCC
Q 022386 5 FKGDILKGKVALLTGG--GSGIGFEISLQLGKHGAAIAIMGRRK-----------TVLR-----------SAVAALHSLG 60 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~--t~giG~~ia~~l~~~G~~Vv~~~r~~-----------~~~~-----------~~~~~~~~~~ 60 (298)
|+.++|+||++||||| ++|||+++|+.|+++|++|++++|+. +.++ ++.+++.+.+
T Consensus 2 m~~~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (319)
T 2ptg_A 2 PLPVDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKP 81 (319)
T ss_dssp CCCCCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC-----------------------------
T ss_pred CcccccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcc
Confidence 4445689999999999 89999999999999999999998642 1111 2223333322
Q ss_pred CC---eEEEEcc------------CCC--------HHHHHHHHHHHHHHhCCccEEEECCCCCC--CCCCCCCCHHHHHH
Q 022386 61 IP---AIGLEGD------------VRK--------REDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRT 115 (298)
Q Consensus 61 ~~---~~~~~~D------------ls~--------~~~~~~~~~~~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~ 115 (298)
.. ..++.+| +++ +++++++++++.+.|+++|+||||||+.. ..++.+.+.++|++
T Consensus 82 ~~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~ 161 (319)
T 2ptg_A 82 VDLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLA 161 (319)
T ss_dssp ---CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHH
T ss_pred ccccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHH
Confidence 11 2344333 333 44899999999999999999999999753 56778889999999
Q ss_pred HHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc-hhhHHHHHHHHHHHHHHHHHhcCC-CCe
Q 022386 116 VIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ-IHVSAAKAAVDSITRSLALEWGTD-YAI 193 (298)
Q Consensus 116 ~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~-~~Y~~sK~a~~~l~~~la~e~~~~-~gi 193 (298)
.|++|+.++++++++++|+|++ +|+||++||..+..+.+.. ..|++||+|+..|+++++.|++ + +||
T Consensus 162 ~~~vN~~g~~~l~~~~~~~m~~----------~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~~gI 230 (319)
T 2ptg_A 162 AVSSSSYSFVSLLQHFLPLMKE----------GGSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAG-RARAV 230 (319)
T ss_dssp HHHHHTHHHHHHHHHHGGGEEE----------EEEEEEEEECC------------------THHHHHHHHHHHH-HHHCC
T ss_pred HHhHhhHHHHHHHHHHHHHHhc----------CceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhc-cccCe
Confidence 9999999999999999999964 3889999999998888777 6899999999999999999996 5 699
Q ss_pred EEEEEeCCcccCCcccCcCC--hH----HHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 194 RVNGIAPGPIKDTAGVSKLA--PE----EIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 194 rv~~i~PG~v~t~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
|||+|+||+++|++...... .+ +..+.+....|.+++.+|+|+|+.++||+++.+.++||+.|.+|||.++.
T Consensus 231 rvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~~ 308 (319)
T 2ptg_A 231 RVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGLHAM 308 (319)
T ss_dssp EEEEEEECCCC-------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCTTC
T ss_pred eEEEEeeCCccChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCceee
Confidence 99999999999986533211 01 11112234467889999999999999999998999999999999998763
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-40 Score=294.35 Aligned_cols=255 Identities=22% Similarity=0.264 Sum_probs=214.1
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEc---------CChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMG---------RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVR 78 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~---------r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~ 78 (298)
++|+||++|||||++|||++++++|+++|++|++++ |+.+.+++..+++...+..+ .+|+++.+++++
T Consensus 5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~---~~D~~~~~~~~~ 81 (319)
T 1gz6_A 5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKA---VANYDSVEAGEK 81 (319)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEE---EEECCCGGGHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeE---EEeCCCHHHHHH
Confidence 358899999999999999999999999999999964 46677778888887665433 589999999999
Q ss_pred HHHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccc
Q 022386 79 VVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (298)
Q Consensus 79 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~ 158 (298)
+++++.+.++++|+||||||+....++.+.+.++|+..|++|+.++++++++++|+|++++ .|+||++||..
T Consensus 82 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~--------~grIV~vsS~~ 153 (319)
T 1gz6_A 82 LVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN--------YGRIIMTASAS 153 (319)
T ss_dssp HHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--------CEEEEEECCHH
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--------CCEEEEECChh
Confidence 9999999999999999999987767777889999999999999999999999999998865 68999999998
Q ss_pred cccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHH
Q 022386 159 HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 238 (298)
Q Consensus 159 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 238 (298)
+..+.+....|++||+++..|++.++.|++ ++||+||+|+||++ |++...... ++.. .+.+|+|+|.
T Consensus 154 ~~~~~~~~~~Y~aSK~a~~~~~~~la~el~-~~gI~vn~v~PG~~-t~~~~~~~~-~~~~----------~~~~p~dvA~ 220 (319)
T 1gz6_A 154 GIYGNFGQANYSAAKLGLLGLANTLVIEGR-KNNIHCNTIAPNAG-SRMTETVMP-EDLV----------EALKPEYVAP 220 (319)
T ss_dssp HHHCCTTCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEEECC-STTTGGGSC-HHHH----------HHSCGGGTHH
T ss_pred hccCCCCCHHHHHHHHHHHHHHHHHHHHhc-ccCEEEEEEeCCCc-cccccccCC-hhhh----------ccCCHHHHHH
Confidence 888888899999999999999999999998 78999999999998 665332222 2111 1358999999
Q ss_pred HHHHhcCCCCCCccccEEEeCCCCCCC-------------CCCCCchhHHHhhHHhhhhccC
Q 022386 239 AALYLASDAGKYVNGNTLIVDGGNWLS-------------NPRDLPKEAVNQLSRAVERKSR 287 (298)
Q Consensus 239 ~~~~L~s~~~~~~~G~~i~~dgG~~~~-------------~~~~~~~~~~~~~~~~~~~~~~ 287 (298)
.++||+++. .+++|+.|.+|||+... .+.........++|..+.+...
T Consensus 221 ~~~~l~s~~-~~~tG~~~~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~ 281 (319)
T 1gz6_A 221 LVLWLCHES-CEENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICDFSN 281 (319)
T ss_dssp HHHHHTSTT-CCCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTCCTT
T ss_pred HHHHHhCch-hhcCCCEEEECCCeEEEEeeeeccceeccCCCCCCCHHHHHHHHHHhhcccc
Confidence 999999874 58999999999996531 1223445667788887777654
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-40 Score=291.66 Aligned_cols=232 Identities=22% Similarity=0.240 Sum_probs=199.0
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
|.+|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.+.++.++.||++|.++++++++++.+.
T Consensus 26 m~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (301)
T 3tjr_A 26 LSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRL 105 (301)
T ss_dssp CCCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred HhccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 44689999999999999999999999999999999999999999999999888889999999999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
++++|++|||||+...+++.+.+.++|++.+++|+.++++++++++|+|.+++. +|+||++||..+..+.+..
T Consensus 106 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~ 178 (301)
T 3tjr_A 106 LGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGT-------GGHIAFTASFAGLVPNAGL 178 (301)
T ss_dssp HSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCS-------CEEEEEECCGGGTSCCTTB
T ss_pred CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCC-------CcEEEEeCchhhcCCCCCc
Confidence 999999999999988788888999999999999999999999999999987642 4899999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCCh--------HHHHHHHhhhccCCCCCCHHHHHH
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP--------EEIRSKATDYMAAYKFGEKWDIAM 238 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~dva~ 238 (298)
..|++||+|++.|+++++.|++ +.||+|++|+||+++|++....... ......+........+.+|+|+|+
T Consensus 179 ~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~ 257 (301)
T 3tjr_A 179 GTYGVAKYGVVGLAETLAREVK-PNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVAR 257 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCCHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHHHHHH
Confidence 9999999999999999999998 7899999999999998864321100 000011111122345779999999
Q ss_pred HHHHhcCC
Q 022386 239 AALYLASD 246 (298)
Q Consensus 239 ~~~~L~s~ 246 (298)
.++.++..
T Consensus 258 ~i~~~l~~ 265 (301)
T 3tjr_A 258 LTADAILA 265 (301)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99998864
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-41 Score=293.82 Aligned_cols=247 Identities=25% Similarity=0.242 Sum_probs=199.4
Q ss_pred CCCCCcEEEEecCC--chhHHHHHHHHHHcCCcEEEEcCChhHHH-------HHHHHHHhC--CC--C-eEEEEcc----
Q 022386 8 DILKGKVALLTGGG--SGIGFEISLQLGKHGAAIAIMGRRKTVLR-------SAVAALHSL--GI--P-AIGLEGD---- 69 (298)
Q Consensus 8 ~~l~gk~~lVtG~t--~giG~~ia~~l~~~G~~Vv~~~r~~~~~~-------~~~~~~~~~--~~--~-~~~~~~D---- 69 (298)
++|+||++|||||+ +|||+++|++|+++|++|++++|+..... +..+.+.+. +. + ...+.+|
T Consensus 4 ~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (297)
T 1d7o_A 4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD 83 (297)
T ss_dssp CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred cccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceecc
Confidence 35889999999999 99999999999999999999987532100 000111111 11 1 2333443
Q ss_pred ----CC----C--------HHHHHHHHHHHHHHhCCccEEEECCCCCC--CCCCCCCCHHHHHHHHHhhhHHHHHHHHHH
Q 022386 70 ----VR----K--------REDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131 (298)
Q Consensus 70 ----ls----~--------~~~~~~~~~~~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 131 (298)
++ | +++++++++++.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.+++++++++
T Consensus 84 ~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~ 163 (297)
T 1d7o_A 84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF 163 (297)
T ss_dssp SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred chhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHH
Confidence 33 2 56899999999999999999999999653 567778899999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc-hhhHHHHHHHHHHHHHHHHHhcCC-CCeEEEEEeCCcccCCccc
Q 022386 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ-IHVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTAGV 209 (298)
Q Consensus 132 ~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~-~~Y~~sK~a~~~l~~~la~e~~~~-~girv~~i~PG~v~t~~~~ 209 (298)
+|+|++ +|+||++||..+..+.+.. ..|++||+|++.|+++++.|++ + +||+||+|+||+++|++..
T Consensus 164 ~~~m~~----------~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~~gi~vn~v~PG~v~T~~~~ 232 (297)
T 1d7o_A 164 LPIMNP----------GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAG-RKQNIRVNTISAGPLGSRAAK 232 (297)
T ss_dssp GGGEEE----------EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHH-HHHCCEEEEEEECCCBCCCSS
T ss_pred HHHhcc----------CceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhC-cccCcEEEEEeccccccchhh
Confidence 999964 3789999999998888877 6999999999999999999996 4 6999999999999998754
Q ss_pred CcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 210 SKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
.....++.........|.+++.+|+|+|+.++||+++.+.+++|+.|.+|||..+.
T Consensus 233 ~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~~~ 288 (297)
T 1d7o_A 233 AIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSM 288 (297)
T ss_dssp CCSHHHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred hccccHHHHHHhhccCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCceee
Confidence 42222344444555678889999999999999999998999999999999997763
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-40 Score=289.76 Aligned_cols=240 Identities=22% Similarity=0.258 Sum_probs=194.7
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCC--CeEEEEccCCCHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGI--PAIGLEGDVRKREDAVRVVES 82 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dls~~~~~~~~~~~ 82 (298)
|+|.+|+||++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+. ++.++.+|++++++++++++.
T Consensus 1 M~m~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~ 80 (319)
T 3ioy_A 1 MSLKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADE 80 (319)
T ss_dssp --CCCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHH
T ss_pred CCccCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 567789999999999999999999999999999999999999999999888877655 799999999999999999999
Q ss_pred HHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC
Q 022386 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (298)
Q Consensus 83 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~ 162 (298)
+.+.++++|+||||||+...+++.+.+.++|++.+++|+.|+++++++++|.|.++.. ......|+||++||..+..+
T Consensus 81 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--~~~~~~g~iV~isS~a~~~~ 158 (319)
T 3ioy_A 81 VEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVK--AGEQKGGHVVNTASMAAFLA 158 (319)
T ss_dssp HHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH--TTSCCCCEEEEECCGGGTCC
T ss_pred HHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhh--ccCCCCcEEEEecccccccC
Confidence 9999999999999999988888889999999999999999999999999999987500 00011689999999999999
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHH---------HhhhccC-CCCCC
Q 022386 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK---------ATDYMAA-YKFGE 232 (298)
Q Consensus 163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~---------~~~~~~~-~~~~~ 232 (298)
.+....|++||+|++.|+++++.|+. +.||+|++|+||+|+|++............. ....... ....+
T Consensus 159 ~~~~~~Y~aSKaal~~~~~~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (319)
T 3ioy_A 159 AGSPGIYNTTKFAVRGLSESLHYSLL-KYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGME 237 (319)
T ss_dssp CSSSHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEECCCCBC-----------------------------CCGGGSSBC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhh-hcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCC
Confidence 99999999999999999999999998 7899999999999998865433211111000 0000000 11269
Q ss_pred HHHHHHHHHHhcCCC
Q 022386 233 KWDIAMAALYLASDA 247 (298)
Q Consensus 233 ~~dva~~~~~L~s~~ 247 (298)
|+++|+.++..+..+
T Consensus 238 pe~vA~~~~~al~~~ 252 (319)
T 3ioy_A 238 PDVIGARVIEAMKAN 252 (319)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcC
Confidence 999999999988653
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-41 Score=299.47 Aligned_cols=254 Identities=14% Similarity=0.064 Sum_probs=209.4
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHH-cCCcEEEEcCChhHH------------HHHHHHHHhCCCCeEEEEccCCCHHHH
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGK-HGAAIAIMGRRKTVL------------RSAVAALHSLGIPAIGLEGDVRKREDA 76 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~-~G~~Vv~~~r~~~~~------------~~~~~~~~~~~~~~~~~~~Dls~~~~~ 76 (298)
-.+|++|||||++|||+++|+.|++ +|++|++++++.+.. +...+.+.+.+.++..+.+|++|++++
T Consensus 45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v 124 (405)
T 3zu3_A 45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIK 124 (405)
T ss_dssp TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence 4589999999999999999999999 999999998875432 223445666788899999999999999
Q ss_pred HHHHHHHHHHhCCccEEEECCCCC-------------CCCCC---------------------CCCCHHHHHHHHHhhhH
Q 022386 77 VRVVESTINHFGKLDILVNAAAGN-------------FLVPA---------------------EDLSPNGFRTVIEIDSV 122 (298)
Q Consensus 77 ~~~~~~~~~~~~~id~li~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n~~ 122 (298)
+++++++.+.||++|+||||||.. ..+++ .+.+.++|+.++++|..
T Consensus 125 ~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~ 204 (405)
T 3zu3_A 125 QLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGG 204 (405)
T ss_dssp HHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhch
Confidence 999999999999999999999974 23454 67899999999999999
Q ss_pred HHH-HHHHHHHHH-HHhcCCCCCCCCCCcEEEEecccccccCCCCc--hhhHHHHHHHHHHHHHHHHHhcCCC-CeEEEE
Q 022386 123 GTF-IMCHEALKY-LKKGGRGQASSSSGGIIINISATLHYTATWYQ--IHVSAAKAAVDSITRSLALEWGTDY-AIRVNG 197 (298)
Q Consensus 123 ~~~-~l~~~~~~~-~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~--~~Y~~sK~a~~~l~~~la~e~~~~~-girv~~ 197 (298)
+.| ++++++.+. |.. . +|+||++||..+..+.+.. ..|++||+++.+|+++++.|++ ++ |||||+
T Consensus 205 ~~~~~~~~~~~~~~m~~-~--------gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela-~~~GIRVNa 274 (405)
T 3zu3_A 205 EDWQMWIDALLDAGVLA-E--------GAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLA-AHGGGDARV 274 (405)
T ss_dssp HHHHHHHHHHHHHTCEE-E--------EEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHH-TTTSCEEEE
T ss_pred hHHHHHHHHHHHHhhhh-C--------CcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhC-cccCeEEEE
Confidence 998 788887754 443 2 5899999999999888877 9999999999999999999999 88 999999
Q ss_pred EeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCC-CchhHHH
Q 022386 198 IAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRD-LPKEAVN 276 (298)
Q Consensus 198 i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~-~~~~~~~ 276 (298)
|+||++.|++.......+.....+. .++++.++++|+++.+.||+++ +++|+.+.+|++..++..+| +.+.+..
T Consensus 275 VaPG~i~T~~s~~ip~~p~y~~~l~--~~mkr~G~~Ed~a~~i~~L~sd---~l~~~~~~~D~~~~~r~d~~e~~~~~q~ 349 (405)
T 3zu3_A 275 SVLKAVVSQASSAIPMMPLYLSLLF--KVMKEKGTHEGCIEQVYSLYKD---SLCGDSPHMDQEGRLRADYKELDPEVQN 349 (405)
T ss_dssp EECCCCCCHHHHTSTTHHHHHHHHH--HHHHHHTCCCCHHHHHHHHHHH---TTSSSCCCBCTTSCEECCHHHHCHHHHH
T ss_pred EEeCCCcCchhhcCCCCcHHHHHHH--HHHhcCCCcHHHHHHHHHHHhc---cccCCCCCcCCCcCCCCchhhcCHHHHH
Confidence 9999999986544322232222222 2688899999999999999986 78899999999999987664 3344433
Q ss_pred hh
Q 022386 277 QL 278 (298)
Q Consensus 277 ~~ 278 (298)
+.
T Consensus 350 ~~ 351 (405)
T 3zu3_A 350 QV 351 (405)
T ss_dssp HH
T ss_pred HH
Confidence 33
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-40 Score=280.18 Aligned_cols=224 Identities=18% Similarity=0.202 Sum_probs=187.2
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
|++|||||++|||++++++|+++|++|++++|+.+.+++..+++ +.++.++.+|+++.++++++++++.+ ..|+
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~---~~d~ 75 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL---SNNVGYRARDLASHQEVEQLFEQLDS---IPST 75 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC---SSCCCEEECCTTCHHHHHHHHHSCSS---CCSE
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---hhccCeEeecCCCHHHHHHHHHHHhh---cCCE
Confidence 68999999999999999999999999999999988777665554 56788999999999999999987654 3499
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHHH
Q 022386 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 172 (298)
Q Consensus 93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~s 172 (298)
+|||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++ ++||++||..+..+.+....|++|
T Consensus 76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~---------~~iv~isS~~~~~~~~~~~~Y~as 146 (230)
T 3guy_A 76 VVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP---------VNVVMIMSTAAQQPKAQESTYCAV 146 (230)
T ss_dssp EEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC---------CEEEEECCGGGTSCCTTCHHHHHH
T ss_pred EEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---------CeEEEEeecccCCCCCCCchhHHH
Confidence 99999988888888899999999999999999999999999998763 589999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcC-CCCCCc
Q 022386 173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS-DAGKYV 251 (298)
Q Consensus 173 K~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s-~~~~~~ 251 (298)
|++++.|+++++.|++ ++||+||+|+||+++|++..... ...+.+++.+|+|+|+.+.||++ +.++++
T Consensus 147 Kaa~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~----------~~~~~~~~~~~~dvA~~i~~l~~~~~~~~i 215 (230)
T 3guy_A 147 KWAVKGLIESVRLELK-GKPMKIIAVYPGGMATEFWETSG----------KSLDTSSFMSAEDAALMIHGALANIGNGYV 215 (230)
T ss_dssp HHHHHHHHHHHHHHTT-TSSCEEEEEEECCC--------------------------CCCHHHHHHHHHHHCCEETTEEE
T ss_pred HHHHHHHHHHHHHHHH-hcCeEEEEEECCcccChHHHhcC----------CCCCcccCCCHHHHHHHHHHHHhCcCCCCc
Confidence 9999999999999998 88999999999999988643321 12356788999999999999997 678899
Q ss_pred cccEEEeCCCC
Q 022386 252 NGNTLIVDGGN 262 (298)
Q Consensus 252 ~G~~i~~dgG~ 262 (298)
+|+.+..+...
T Consensus 216 tg~~~~~~~~~ 226 (230)
T 3guy_A 216 SDITVNREGHH 226 (230)
T ss_dssp EEEEEEC----
T ss_pred cceeecCCCCC
Confidence 99999887654
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-41 Score=301.67 Aligned_cols=259 Identities=16% Similarity=0.069 Sum_probs=209.7
Q ss_pred CCcEEEEecCCchhHHHHHHHHHH-cCCcEEEEcCChhHHH------------HHHHHHHhCCCCeEEEEccCCCHHHHH
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGK-HGAAIAIMGRRKTVLR------------SAVAALHSLGIPAIGLEGDVRKREDAV 77 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~-~G~~Vv~~~r~~~~~~------------~~~~~~~~~~~~~~~~~~Dls~~~~~~ 77 (298)
.+|++|||||++|||+++|+.|++ .|++|++++|+.+.++ .+.+.+.+.+.++..+.||++++++++
T Consensus 60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~ 139 (422)
T 3s8m_A 60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA 139 (422)
T ss_dssp SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence 489999999999999999999999 9999999998865432 234566777888999999999999999
Q ss_pred HHHHHHHHHh-CCccEEEECCCCC-------------CCCCC---------------------CCCCHHHHHHHHHhhhH
Q 022386 78 RVVESTINHF-GKLDILVNAAAGN-------------FLVPA---------------------EDLSPNGFRTVIEIDSV 122 (298)
Q Consensus 78 ~~~~~~~~~~-~~id~li~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n~~ 122 (298)
++++.+.++| |++|+||||||.. ..+++ .+.+.++|+.++++|..
T Consensus 140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~ 219 (422)
T 3s8m_A 140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGG 219 (422)
T ss_dssp HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhch
Confidence 9999999999 9999999999872 23444 35789999999999999
Q ss_pred HHH-HHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc--hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Q 022386 123 GTF-IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ--IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA 199 (298)
Q Consensus 123 ~~~-~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~--~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~ 199 (298)
+.| ++++++.+.+.... +|+||++||..+..+.+.. ..|++||+|+.+|+++++.|++ ++|||||+|+
T Consensus 220 ~~~~~~~~a~~~~~m~~~--------gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela-~~GIRVNaVa 290 (422)
T 3s8m_A 220 QDWELWIDALEGAGVLAD--------GARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLA-KHGGGANVAV 290 (422)
T ss_dssp HHHHHHHHHHHHTTCEEE--------EEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEE
T ss_pred hHHHHHHHHHHHHHHhhC--------CCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhC-ccCEEEEEEE
Confidence 987 77888776433322 5899999999998887766 8999999999999999999998 8899999999
Q ss_pred CCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCCCCcc-ccEEEeCCCCCCCCCCC-CchhHHHh
Q 022386 200 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVN-GNTLIVDGGNWLSNPRD-LPKEAVNQ 277 (298)
Q Consensus 200 PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~-G~~i~~dgG~~~~~~~~-~~~~~~~~ 277 (298)
||++.|++.......+.... ....++++.++|||+++.+.||+++.- |.+ |+...+|++..++..+| +.+.+..+
T Consensus 291 PG~i~T~~~~~ip~~~~~~~--~~~~~m~r~G~pEdva~~v~~L~sd~l-y~~~~~~~~~d~~~~~r~d~~e~~~~~q~~ 367 (422)
T 3s8m_A 291 LKSVVTQASAAIPVMPLYIS--MVYKIMKEKGLHEGTIEQLDRLFRERL-YRQDGQPAEVDEQNRLRLDDWELRDDVQDA 367 (422)
T ss_dssp ECCCCCTTGGGSTHHHHHHH--HHHHHHHHTTCCCCHHHHHHHHHHHTT-TCTTCCCCCCCTTSCEESCTTTTSHHHHHH
T ss_pred cCCCcChhhhcCCCChHHHH--HHHhhhcCCcChHHHHHHHHHHhcchh-hccCCCCcccCCCCCCccchhhCCHHHHHH
Confidence 99999987544322222222 222378889999999999999998743 665 77777999999887774 55555444
Q ss_pred hHHh
Q 022386 278 LSRA 281 (298)
Q Consensus 278 ~~~~ 281 (298)
....
T Consensus 368 ~~~~ 371 (422)
T 3s8m_A 368 CKAL 371 (422)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4333
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-41 Score=292.19 Aligned_cols=256 Identities=18% Similarity=0.142 Sum_probs=200.7
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
.++.+|+||+++||||++|||++++++|+++|++|++++|+.+++++..+++ +.++.++.+|++|.++++++++++
T Consensus 9 ~~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~v~~~~~~~- 84 (291)
T 3rd5_A 9 ADLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM---AGQVEVRELDLQDLSSVRRFADGV- 84 (291)
T ss_dssp GGCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS---SSEEEEEECCTTCHHHHHHHHHTC-
T ss_pred hhccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---cCCeeEEEcCCCCHHHHHHHHHhc-
Confidence 4566899999999999999999999999999999999999988776655544 567999999999999999998866
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC--
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-- 162 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~-- 162 (298)
+++|++|||||+... ..+.+.++|++++++|+.++++++++++|.|.+ +||++||..+..+
T Consensus 85 ---~~iD~lv~nAg~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~------------riv~isS~~~~~~~~ 147 (291)
T 3rd5_A 85 ---SGADVLINNAGIMAV--PYALTVDGFESQIGTNHLGHFALTNLLLPRLTD------------RVVTVSSMAHWPGRI 147 (291)
T ss_dssp ---CCEEEEEECCCCCSC--CCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE------------EEEEECCGGGTTCCC
T ss_pred ---CCCCEEEECCcCCCC--cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh------------heeEeechhhccCCC
Confidence 799999999997542 345677899999999999999999999999863 5999999988755
Q ss_pred -----------CCCchhhHHHHHHHHHHHHHHHHHhcCCCC--eEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCC
Q 022386 163 -----------TWYQIHVSAAKAAVDSITRSLALEWGTDYA--IRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK 229 (298)
Q Consensus 163 -----------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~g--irv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~ 229 (298)
.++...|++||++++.|++.++.|++ ++| |+||+|+||+++|++..... +...... ...+.++
T Consensus 148 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~g~~i~v~~v~PG~v~T~~~~~~~--~~~~~~~-~~~~~~~ 223 (291)
T 3rd5_A 148 NLEDLNWRSRRYSPWLAYSQSKLANLLFTSELQRRLT-AAGSPLRALAAHPGYSHTNLQGASG--RKLGDAL-MSAATRV 223 (291)
T ss_dssp CSSCTTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHH-HTTCCCEEEEECCSGGGSCC----------------------
T ss_pred CcccccccccCCCCcchHHHHHHHHHHHHHHHHHHHh-hCCCCEEEEEeeCCCCccccccccc--hHHHHHH-HHHHHHH
Confidence 34567899999999999999999997 666 99999999999998754431 2222222 2234455
Q ss_pred CCC-HHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC------CCCCCchhHHHhhHHhhhhccC
Q 022386 230 FGE-KWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS------NPRDLPKEAVNQLSRAVERKSR 287 (298)
Q Consensus 230 ~~~-~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~------~~~~~~~~~~~~~~~~~~~~~~ 287 (298)
+.. |+|+|+.++||+++ .+++|+.|.+|||..-. .+....+...+++|+..++...
T Consensus 224 ~~~~~~~~A~~~~~l~~~--~~~~G~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~ 286 (291)
T 3rd5_A 224 VATDADFGARQTLYAASQ--DLPGDSFVGPRFGYLGRTQPVGRSRRAKDAGMAAALWALSEQLTK 286 (291)
T ss_dssp -CHHHHHHHHHHHHHHHS--CCCTTCEEEETTSSSSCEEECCCCTGGGCHHHHHHHHHHHHHHHT
T ss_pred HhCCHHHHHHHHHHHHcC--CCCCCceeCCcccccCccccCCCCcccCCHHHHHHHHHHHHHHHc
Confidence 554 99999999999998 48999999999998742 1223445567777777776654
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-40 Score=282.46 Aligned_cols=242 Identities=27% Similarity=0.337 Sum_probs=200.0
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC--CCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
+|++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.+. +.++.++.||++|+++++++++.+.+.
T Consensus 4 m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (267)
T 2gdz_A 4 MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH 83 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999999988777777777553 456889999999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
++++|++|||||... .++|++.+++|+.+++.+++.++|.|.+++. ...|+||++||..+..+.+..
T Consensus 84 ~g~id~lv~~Ag~~~--------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-----~~~g~iv~isS~~~~~~~~~~ 150 (267)
T 2gdz_A 84 FGRLDILVNNAGVNN--------EKNWEKTLQINLVSVISGTYLGLDYMSKQNG-----GEGGIIINMSSLAGLMPVAQQ 150 (267)
T ss_dssp HSCCCEEEECCCCCC--------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGT-----CCCEEEEEECCGGGTSCCTTC
T ss_pred cCCCCEEEECCCCCC--------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccC-----CCCCEEEEeCCccccCCCCCC
Confidence 999999999999642 3568899999999999999999999976421 014899999999999888889
Q ss_pred hhhHHHHHHHHHHHHHH--HHHhcCCCCeEEEEEeCCcccCCcccCcCChHHH------HHHHhhhccCCCCCCHHHHHH
Q 022386 167 IHVSAAKAAVDSITRSL--ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI------RSKATDYMAAYKFGEKWDIAM 238 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~l--a~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~dva~ 238 (298)
..|++||++++.+++++ +.|++ ++||+||+|+||+++|++.......+.. ........+..++.+|+|+|+
T Consensus 151 ~~Y~~sK~a~~~~~~~~ala~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~ 229 (267)
T 2gdz_A 151 PVYCASKHGIVGFTRSAALAANLM-NSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIAN 229 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHhc-cCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHHHHHH
Confidence 99999999999999995 68887 7899999999999998754322111110 111111122235779999999
Q ss_pred HHHHhcCCCCCCccccEEEeCCCCCCCC
Q 022386 239 AALYLASDAGKYVNGNTLIVDGGNWLSN 266 (298)
Q Consensus 239 ~~~~L~s~~~~~~~G~~i~~dgG~~~~~ 266 (298)
.++||+++. .++|+.|.++||..+..
T Consensus 230 ~v~~l~s~~--~~~G~~~~v~gg~~~~~ 255 (267)
T 2gdz_A 230 GLITLIEDD--ALNGAIMKITTSKGIHF 255 (267)
T ss_dssp HHHHHHHCT--TCSSCEEEEETTTEEEE
T ss_pred HHHHHhcCc--CCCCcEEEecCCCcccc
Confidence 999999875 49999999999987643
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-39 Score=280.02 Aligned_cols=248 Identities=22% Similarity=0.250 Sum_probs=205.8
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCC--CCeEEEEccCCCHHHHHHHHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
.|.+|++|++|||||++|||+++++.|+++|++|++++|+.+.++++.+++...+ .++.++.+|++|+++++++++++
T Consensus 26 ~m~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 105 (279)
T 1xg5_A 26 GMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAI 105 (279)
T ss_dssp TCGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHH
T ss_pred cccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHH
Confidence 3456899999999999999999999999999999999999988888888887664 45888999999999999999999
Q ss_pred HHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc--c
Q 022386 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY--T 161 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~--~ 161 (298)
.+.++++|++|||||.....++.+.+.++|++.+++|+.+++++++.+++.|++.+. .+++||++||..+. .
T Consensus 106 ~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~------~~g~iv~isS~~~~~~~ 179 (279)
T 1xg5_A 106 RSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNV------DDGHIININSMSGHRVL 179 (279)
T ss_dssp HHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC------CSCEEEEECCGGGTSCC
T ss_pred HHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC------CCceEEEEcChhhcccC
Confidence 999999999999999877777888899999999999999999999999999987641 03899999999887 5
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHH
Q 022386 162 ATWYQIHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240 (298)
Q Consensus 162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~-~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 240 (298)
+.+....|++||++++.+++.++.|++ .+.||+++.|+||+++|++......... .......+..++.+|+|+|+.+
T Consensus 180 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~dvA~~i 257 (279)
T 1xg5_A 180 PLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDP--EKAAATYEQMKCLKPEDVAEAV 257 (279)
T ss_dssp SCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCH--HHHHHHHC---CBCHHHHHHHH
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccCh--hHHhhhcccccCCCHHHHHHHH
Confidence 666788999999999999999999984 1468999999999999886322211111 1122223445688999999999
Q ss_pred HHhcCCCCCCccccEEEeCCC
Q 022386 241 LYLASDAGKYVNGNTLIVDGG 261 (298)
Q Consensus 241 ~~L~s~~~~~~~G~~i~~dgG 261 (298)
+++++++..+.+|+....++|
T Consensus 258 ~~l~~~~~~~~~g~i~i~~~~ 278 (279)
T 1xg5_A 258 IYVLSTPAHIQIGDIQMRPTG 278 (279)
T ss_dssp HHHHHSCTTEEEEEEEEEETT
T ss_pred HHHhcCCcceEeeeEEEccCC
Confidence 999998888888865544433
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-39 Score=280.40 Aligned_cols=238 Identities=24% Similarity=0.246 Sum_probs=200.0
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+. .+.++.++.+|++|.++++++++++.+.++
T Consensus 2 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g 78 (281)
T 3m1a_A 2 SESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAA---YPDRAEAISLDVTDGERIDVVAADVLARYG 78 (281)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHH---CTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---ccCCceEEEeeCCCHHHHHHHHHHHHHhCC
Confidence 35789999999999999999999999999999999998877665543 356799999999999999999999999999
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchh
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~ 168 (298)
++|++|||||.....++.+.+.++|++.+++|+.+++++++.++|.|++++ .|+||++||..+..+.++...
T Consensus 79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~ 150 (281)
T 3m1a_A 79 RVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERG--------SGSVVNISSFGGQLSFAGFSA 150 (281)
T ss_dssp CCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTCCCTTCHH
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------CCEEEEEcCccccCCCCCchH
Confidence 999999999987777888899999999999999999999999999999876 689999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC------Ch---H--HHHHHHhhhccCCCCCCHHHHH
Q 022386 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL------AP---E--EIRSKATDYMAAYKFGEKWDIA 237 (298)
Q Consensus 169 Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~------~~---~--~~~~~~~~~~~~~~~~~~~dva 237 (298)
|++||++++.++++++.|++ ++||+||+|+||+++|++..... .. . ..........+.+++.+|+|+|
T Consensus 151 Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva 229 (281)
T 3m1a_A 151 YSATKAALEQLSEGLADEVA-PFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAA 229 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhh-ccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHH
Confidence 99999999999999999998 78999999999999998643211 11 1 1112333445777889999999
Q ss_pred HHHHHhcCCCCCCccccEEEeCCC
Q 022386 238 MAALYLASDAGKYVNGNTLIVDGG 261 (298)
Q Consensus 238 ~~~~~L~s~~~~~~~G~~i~~dgG 261 (298)
++++++++.+. .|..+.+.++
T Consensus 230 ~a~~~~~~~~~---~~~~~~l~s~ 250 (281)
T 3m1a_A 230 AAIRLALDTEK---TPLRLALGGD 250 (281)
T ss_dssp HHHHHHHHSSS---CCSEEEESHH
T ss_pred HHHHHHHhCCC---CCeEEecCch
Confidence 99999997653 3566666554
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-40 Score=313.94 Aligned_cols=237 Identities=24% Similarity=0.283 Sum_probs=190.4
Q ss_pred CCCCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcC---------ChhHHHHHHHHHHhCCCCeEEEEccCCCH
Q 022386 3 SPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR---------RKTVLRSAVAALHSLGIPAIGLEGDVRKR 73 (298)
Q Consensus 3 ~~~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~Dls~~ 73 (298)
++....+|+||++|||||++|||+++|+.|+++|++|++++| +.+.++++.+++.+.+..+ .+|+++.
T Consensus 10 ~~~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~D~~d~ 86 (613)
T 3oml_A 10 SSDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEA---VADYNSV 86 (613)
T ss_dssp -----CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCE---EECCCCG
T ss_pred CcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeE---EEEeCCH
Confidence 445567899999999999999999999999999999999987 6667778888887776654 3799999
Q ss_pred HHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEE
Q 022386 74 EDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIIN 153 (298)
Q Consensus 74 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~ 153 (298)
++++++++++.+.|+++|+||||||+....++.+.+.++|+.++++|+.|+++++++++|+|++++ .|+||+
T Consensus 87 ~~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~--------~g~IV~ 158 (613)
T 3oml_A 87 IDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQN--------YGRIIM 158 (613)
T ss_dssp GGHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT--------CEEEEE
T ss_pred HHHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--------CCEEEE
Confidence 999999999999999999999999998888888999999999999999999999999999999876 699999
Q ss_pred ecccccccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCH
Q 022386 154 ISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEK 233 (298)
Q Consensus 154 vss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (298)
+||..+..+.+....|++||+|+.+|+++++.|++ ++||+||+|+||++ |++...... ++. ....+|
T Consensus 159 isS~a~~~~~~~~~~Y~asKaal~~lt~~la~e~~-~~gI~vn~v~Pg~~-t~~~~~~~~-~~~----------~~~~~p 225 (613)
T 3oml_A 159 TSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIEGA-RNNVLCNVIVPTAA-SRMTEGILP-DIL----------FNELKP 225 (613)
T ss_dssp ECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC-------CCCCC-HHH----------HTTCCG
T ss_pred ECCHHHcCCCCCChHHHHHHHHHHHHHHHHHHHhC-ccCeEEEEEECCCC-Chhhhhccc-hhh----------hhcCCH
Confidence 99999999999999999999999999999999998 88999999999986 555433332 221 124589
Q ss_pred HHHHHHHHHhcCCCCCCccccEEEeCCCCCC
Q 022386 234 WDIAMAALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 234 ~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
+|+|..++||+++. .++||+.|.+|||...
T Consensus 226 edvA~~v~~L~s~~-~~~tG~~i~vdGG~~~ 255 (613)
T 3oml_A 226 KLIAPVVAYLCHES-CEDNGSYIESAAGWAT 255 (613)
T ss_dssp GGTHHHHHHTTSTT-CCCCSCEEEEETTEEE
T ss_pred HHHHHHHHHhcCCC-cCCCceEEEECCCeEE
Confidence 99999999999998 8999999999999764
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=269.56 Aligned_cols=225 Identities=25% Similarity=0.345 Sum_probs=190.2
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.+|+++||||++|||++++++|+++|++|++++|+.+.+++..+++. ++.++.+|++|+++++++++.+.+.++++
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE----GALPLPGDVREEGDWARAVAAMEEAFGEL 79 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh----hceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 47899999999999999999999999999999999877766655442 58889999999999999999999999999
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhH
Q 022386 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS 170 (298)
Q Consensus 91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~ 170 (298)
|++|||||.....++.+.+.++|++.+++|+.+++++++.+++.|++++ .++||++||..+..+.+....|+
T Consensus 80 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~ 151 (234)
T 2ehd_A 80 SALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRG--------GGTIVNVGSLAGKNPFKGGAAYN 151 (234)
T ss_dssp CEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT--------CEEEEEECCTTTTSCCTTCHHHH
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--------CcEEEEECCchhcCCCCCCchhh
Confidence 9999999987777778889999999999999999999999999998765 68999999999988888899999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCCCC
Q 022386 171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKY 250 (298)
Q Consensus 171 ~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~ 250 (298)
+||++++.++++++.|++ ++||+++.|+||+++|++.... ++. . .+.+|+|+|+.+++++++++.+
T Consensus 152 ~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~--~~~----~-------~~~~~~dvA~~~~~l~~~~~~~ 217 (234)
T 2ehd_A 152 ASKFGLLGLAGAAMLDLR-EANVRVVNVLPGSVDTGFAGNT--PGQ----A-------WKLKPEDVAQAVLFALEMPGHA 217 (234)
T ss_dssp HHHHHHHHHHHHHHHHHG-GGTEEEEEEECC-----------------------------CCHHHHHHHHHHHHHSCCSS
T ss_pred HHHHHHHHHHHHHHHHHh-hcCcEEEEEEeCCCcCCccccc--ccc----c-------CCCCHHHHHHHHHHHhCCCccc
Confidence 999999999999999997 7799999999999998754321 110 0 1469999999999999998899
Q ss_pred ccccEEEeCCC
Q 022386 251 VNGNTLIVDGG 261 (298)
Q Consensus 251 ~~G~~i~~dgG 261 (298)
++|+.+..++.
T Consensus 218 ~~g~~~~~~~~ 228 (234)
T 2ehd_A 218 MVSEIELRPTR 228 (234)
T ss_dssp CCCEEECCC--
T ss_pred ccceEEEeecC
Confidence 99997765544
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-40 Score=277.81 Aligned_cols=225 Identities=15% Similarity=0.045 Sum_probs=194.0
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh-
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF- 87 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~- 87 (298)
++++|+++||||++|||++++++|+++|++|++++|+.+..+ ....++.+|++|+++++++++++.+.+
T Consensus 4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 73 (241)
T 1dhr_A 4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----------SASVIVKMTDSFTEQADQVTAEVGKLLG 73 (241)
T ss_dssp --CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----------SEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc----------CCcEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 467899999999999999999999999999999999865422 135678899999999999999999999
Q ss_pred -CCccEEEECCCCCCCCCC-CCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC
Q 022386 88 -GKLDILVNAAAGNFLVPA-EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (298)
Q Consensus 88 -~~id~li~~ag~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~ 165 (298)
+++|++|||||+....++ .+.+.++|++.+++|+.++++++++++|+|++ +|+||++||..+..+.+.
T Consensus 74 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~----------~g~iv~isS~~~~~~~~~ 143 (241)
T 1dhr_A 74 DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE----------GGLLTLAGAKAALDGTPG 143 (241)
T ss_dssp TCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE----------EEEEEEECCGGGGSCCTT
T ss_pred CCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc----------CCEEEEECCHHHccCCCC
Confidence 799999999998766666 67788999999999999999999999999964 478999999999999889
Q ss_pred chhhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhc
Q 022386 166 QIHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~-~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~ 244 (298)
...|++||++++.++++++.|++ .++||+||+|+||+++|++....... ....+..+++|+|+.+++++
T Consensus 144 ~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~~----------~~~~~~~~~~~vA~~v~~l~ 213 (241)
T 1dhr_A 144 MIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPE----------ADFSSWTPLEFLVETFHDWI 213 (241)
T ss_dssp BHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTT----------SCGGGSEEHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCcc----------hhhccCCCHHHHHHHHHHHh
Confidence 99999999999999999999984 15699999999999998753221111 11223568899999999999
Q ss_pred CCCCCCccccEEEeCCCCC
Q 022386 245 SDAGKYVNGNTLIVDGGNW 263 (298)
Q Consensus 245 s~~~~~~~G~~i~~dgG~~ 263 (298)
++.+.+++|+.+.+|||..
T Consensus 214 ~~~~~~~~G~~~~v~g~~~ 232 (241)
T 1dhr_A 214 TGNKRPNSGSLIQVVTTDG 232 (241)
T ss_dssp TTTTCCCTTCEEEEEEETT
T ss_pred cCCCcCccceEEEEeCCCC
Confidence 9999999999999999865
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=281.46 Aligned_cols=190 Identities=25% Similarity=0.343 Sum_probs=168.5
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCC-----hhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-----KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
+|++|+++||||++|||+++|++|+++|++|+++.|+ .+.++++.+.+...+.++.++.+|++|+++++++++++
T Consensus 2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~ 81 (324)
T 3u9l_A 2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQI 81 (324)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence 4678999999999999999999999999999987765 45666666777667788999999999999999999999
Q ss_pred HHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC-
Q 022386 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA- 162 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~- 162 (298)
.+.+|++|++|||||+...+++.+.+.++|++.+++|+.|+++++++++|+|++++ .|+||++||..+..+
T Consensus 82 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~--------~g~iV~isS~~~~~~~ 153 (324)
T 3u9l_A 82 IGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQK--------HGLLIWISSSSSAGGT 153 (324)
T ss_dssp HHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCC
T ss_pred HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--------CCEEEEEecchhccCC
Confidence 99999999999999988788888999999999999999999999999999999876 699999999988744
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCc
Q 022386 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 207 (298)
Q Consensus 163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~ 207 (298)
.+....|++||+|++.++++++.|++ ++||+|++|+||++.|++
T Consensus 154 ~~~~~~Y~asKaa~~~~~~~la~el~-~~gI~v~~v~PG~v~t~~ 197 (324)
T 3u9l_A 154 PPYLAPYFAAKAAMDAIAVQYARELS-RWGIETSIIVPGAFTSGT 197 (324)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHHHHH-TTTEEEEEEEECCC----
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHhh-hhCcEEEEEECCccccCc
Confidence 46678999999999999999999998 889999999999998664
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-40 Score=277.83 Aligned_cols=224 Identities=19% Similarity=0.125 Sum_probs=192.3
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh--
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-- 87 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-- 87 (298)
|++|+++||||++|||++++++|+++|++|++++|+.+..+ ....++.+|++|+++++++++++.+.+
T Consensus 1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 70 (236)
T 1ooe_A 1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----------DSNILVDGNKNWTEQEQSILEQTASSLQG 70 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----------SEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc----------cccEEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 46899999999999999999999999999999999865422 135678899999999999999999999
Q ss_pred CCccEEEECCCCCCCCCC-CCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 88 GKLDILVNAAAGNFLVPA-EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
+++|++|||||.....++ .+.+.++|++.+++|+.++++++++++|+|++ +|+||++||..+..+.+..
T Consensus 71 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~----------~g~iv~isS~~~~~~~~~~ 140 (236)
T 1ooe_A 71 SQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP----------GGLLQLTGAAAAMGPTPSM 140 (236)
T ss_dssp CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE----------EEEEEEECCGGGGSCCTTB
T ss_pred CCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc----------CCEEEEECchhhccCCCCc
Confidence 799999999998766666 67788999999999999999999999999964 4789999999999998999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHH-Hhc
Q 022386 167 IHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL-YLA 244 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~-~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~-~L~ 244 (298)
..|++||++++.|+++++.|++ .++||+||+|+||+++|++....... ....++.+|+|+|+.++ +|+
T Consensus 141 ~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~----------~~~~~~~~~~dvA~~i~~~l~ 210 (236)
T 1ooe_A 141 IGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPN----------ADHSSWTPLSFISEHLLKWTT 210 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTT----------CCGGGCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCCC----------ccccccCCHHHHHHHHHHHHc
Confidence 9999999999999999999984 15699999999999998753221110 11234578999999998 555
Q ss_pred CCCCCCccccEEEeCCCCC
Q 022386 245 SDAGKYVNGNTLIVDGGNW 263 (298)
Q Consensus 245 s~~~~~~~G~~i~~dgG~~ 263 (298)
++.+.+++|+.|.+|||..
T Consensus 211 s~~~~~~~G~~~~v~gg~~ 229 (236)
T 1ooe_A 211 ETSSRPSSGALLKITTENG 229 (236)
T ss_dssp CGGGCCCTTCEEEEEEETT
T ss_pred CCCcccccccEEEEecCCC
Confidence 8888999999999999965
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-39 Score=271.12 Aligned_cols=234 Identities=25% Similarity=0.355 Sum_probs=198.9
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
+|+++||||++|||++++++|+++|++|++++|+.+ ..++.++.+|++|+++++++++++ +.++++|
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~------------~~~~~~~~~D~~~~~~~~~~~~~~-~~~~~~d 68 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE------------GEDLIYVEGDVTREEDVRRAVARA-QEEAPLF 68 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC------------SSSSEEEECCTTCHHHHHHHHHHH-HHHSCEE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc------------ccceEEEeCCCCCHHHHHHHHHHH-HhhCCce
Confidence 689999999999999999999999999999999864 123578999999999999999999 8899999
Q ss_pred EEEECCCCCCCCCCCCC----CHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 92 ILVNAAAGNFLVPAEDL----SPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
++|||||.....++.+. +.++|++.+++|+.+++++++++.+.|.+++... ....++||++||..+..+.+...
T Consensus 69 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~--~~~~~~iv~~sS~~~~~~~~~~~ 146 (242)
T 1uay_A 69 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDA--EGQRGVIVNTASVAAFEGQIGQA 146 (242)
T ss_dssp EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCT--TSCSEEEEEECCTHHHHCCTTCH
T ss_pred EEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCC--CCCCeEEEEeCChhhccCCCCCc
Confidence 99999998665555443 3459999999999999999999999998753100 01135999999999988888899
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccC-CCCCCHHHHHHHHHHhcCC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA-YKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~L~s~ 246 (298)
.|++||++++.++++++.|++ ++||+++.|+||+++|++.... .+..........+. +++.+|+|+|+++++|+++
T Consensus 147 ~Y~~sK~a~~~~~~~l~~e~~-~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 223 (242)
T 1uay_A 147 AYAASKGGVVALTLPAARELA-GWGIRVVTVAPGLFDTPLLQGL--PEKAKASLAAQVPFPPRLGRPEEYAALVLHILEN 223 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSCSSHHHHTS--CHHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHHC
T ss_pred hhhHHHHHHHHHHHHHHHHHh-hcCcEEEEEEeccCcchhhhcc--chhHHHHHHhhCCCcccCCCHHHHHHHHHHHhcC
Confidence 999999999999999999997 7799999999999998765432 23344455556677 8899999999999999987
Q ss_pred CCCCccccEEEeCCCCCCC
Q 022386 247 AGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 247 ~~~~~~G~~i~~dgG~~~~ 265 (298)
.+++|+.|.+|||..+.
T Consensus 224 --~~~~G~~~~v~gG~~~~ 240 (242)
T 1uay_A 224 --PMLNGEVVRLDGALRMA 240 (242)
T ss_dssp --TTCCSCEEEESTTCCCC
T ss_pred --CCCCCcEEEEcCCeecC
Confidence 78999999999998764
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-38 Score=270.27 Aligned_cols=229 Identities=17% Similarity=0.168 Sum_probs=191.3
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcC--CcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
|++|+++||||++|||++++++|+++| ++|++++|+.+.++++.+. .+.++.++.+|++++++++++++++.+.+
T Consensus 1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (250)
T 1yo6_A 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI---KDSRVHVLPLTVTCDKSLDTFVSKVGEIV 77 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC---CCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhc---cCCceEEEEeecCCHHHHHHHHHHHHHhc
Confidence 468999999999999999999999999 9999999998766544321 35679999999999999999999999999
Q ss_pred C--CccEEEECCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc------CCCCCCCCCCcEEEEecccc
Q 022386 88 G--KLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKG------GRGQASSSSGGIIINISATL 158 (298)
Q Consensus 88 ~--~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~~~~~~~~~g~iv~vss~~ 158 (298)
+ ++|++|||||... ..++.+.+.++|++.+++|+.+++++++++++.|.++ +. .....++||++||..
T Consensus 78 g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~iv~isS~~ 154 (250)
T 1yo6_A 78 GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQ---LSVSRAAVITISSGL 154 (250)
T ss_dssp GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSC---CCTTTCEEEEECCGG
T ss_pred CCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCc---ccCCCcEEEEeccCc
Confidence 8 9999999999876 6777888999999999999999999999999999865 20 001148899999998
Q ss_pred cccCC-------CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCC
Q 022386 159 HYTAT-------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 231 (298)
Q Consensus 159 ~~~~~-------~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (298)
+..+. ++...|++||++++.++++++.|++ ++||++++|+||+++|++... ..+.
T Consensus 155 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~-----------------~~~~ 216 (250)
T 1yo6_A 155 GSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLK-DDNVLVVNFCPGWVQTNLGGK-----------------NAAL 216 (250)
T ss_dssp GCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTG-GGTCEEEEEECCCC----------------------------
T ss_pred cccCCcccccccCCccHHHHHHHHHHHHHHHHHHHhc-cCCeEEEEEcCCceecCCCCC-----------------CCCC
Confidence 87765 5678999999999999999999997 779999999999999875421 1356
Q ss_pred CHHHHHHHHHHhcCCCCCCccccEEEeCCCC
Q 022386 232 EKWDIAMAALYLASDAGKYVNGNTLIVDGGN 262 (298)
Q Consensus 232 ~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~ 262 (298)
+|+|+|+.+++++++...+++|+.+.+|||.
T Consensus 217 ~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~ 247 (250)
T 1yo6_A 217 TVEQSTAELISSFNKLDNSHNGRFFMRNLKP 247 (250)
T ss_dssp --HHHHHHHHHHHTTCCGGGTTCEEETTEEE
T ss_pred CHHHHHHHHHHHHhcccccCCCeEEEECCcC
Confidence 8999999999999988888999999999984
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-39 Score=275.22 Aligned_cols=226 Identities=19% Similarity=0.159 Sum_probs=194.5
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
..+..+|++|||||++|||+++|++|+++|++|++++|+.+..+ -..+.+|++|.++++++++++.+.
T Consensus 17 ~~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~------------~~~~~~d~~d~~~v~~~~~~~~~~ 84 (251)
T 3orf_A 17 RGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA------------DHSFTIKDSGEEEIKSVIEKINSK 84 (251)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS------------SEEEECSCSSHHHHHHHHHHHHTT
T ss_pred cccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------------ccceEEEeCCHHHHHHHHHHHHHH
Confidence 34555899999999999999999999999999999999875322 235789999999999999999999
Q ss_pred hCCccEEEECCCCCCCCC-CCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC
Q 022386 87 FGKLDILVNAAAGNFLVP-AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~ 165 (298)
++++|++|||||+....+ +.+.+.++|++.+++|+.++++++++++|.|++ +|+||++||..+..+.+.
T Consensus 85 ~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~----------~g~iv~isS~~~~~~~~~ 154 (251)
T 3orf_A 85 SIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ----------GGLFVLTGASAALNRTSG 154 (251)
T ss_dssp TCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE----------EEEEEEECCGGGGSCCTT
T ss_pred cCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc----------CCEEEEEechhhccCCCC
Confidence 999999999999866544 667788999999999999999999999999965 478999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhc
Q 022386 166 QIHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~-~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~ 244 (298)
...|++||+|++.++++++.|++ .++||+||+|+||+++|++... .....+..++.+|+|+|+.+++|+
T Consensus 155 ~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~----------~~~~~~~~~~~~~~dva~~i~~l~ 224 (251)
T 3orf_A 155 MIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRK----------YMSDANFDDWTPLSEVAEKLFEWS 224 (251)
T ss_dssp BHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHH----------HCTTSCGGGSBCHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhh----------hcccccccccCCHHHHHHHHHHHh
Confidence 99999999999999999999973 2569999999999999865322 222335567889999999999999
Q ss_pred CC-CCCCccccEEEeCCCCCC
Q 022386 245 SD-AGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 245 s~-~~~~~~G~~i~~dgG~~~ 264 (298)
++ .+.+++|+.|.+++|...
T Consensus 225 ~~~~~~~~tG~~i~v~~g~~~ 245 (251)
T 3orf_A 225 TNSDSRPTNGSLVKFETKSKV 245 (251)
T ss_dssp HCGGGCCCTTCEEEEEEETTE
T ss_pred cCccccCCcceEEEEecCCcc
Confidence 98 889999999999888654
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-39 Score=274.55 Aligned_cols=233 Identities=22% Similarity=0.198 Sum_probs=189.8
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCc-EEEEcCChhHHHHHHHHHHhC--CCCeEEEEccCCCH-HHHHHHHHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKR-EDAVRVVESTI 84 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dls~~-~~~~~~~~~~~ 84 (298)
+|+||+++||||++|||++++++|+++|++ |++++|+.+. +..+++.+. +.++.++.+|++|+ ++++++++++.
T Consensus 2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (254)
T 1sby_A 2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIF 79 (254)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHH
Confidence 578999999999999999999999999997 9999998632 222333332 45688999999998 99999999999
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~ 164 (298)
+.++++|++|||||+. +.++|++.+++|+.++++++++++|.|.+++. ...|+||++||..+..+.+
T Consensus 80 ~~~g~id~lv~~Ag~~--------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-----~~~g~iv~isS~~~~~~~~ 146 (254)
T 1sby_A 80 DQLKTVDILINGAGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKG-----GPGGIIANICSVTGFNAIH 146 (254)
T ss_dssp HHHSCCCEEEECCCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGT-----CCCEEEEEECCGGGTSCCT
T ss_pred HhcCCCCEEEECCccC--------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcC-----CCCCEEEEECchhhccCCC
Confidence 9999999999999963 34678999999999999999999999976531 1148899999999998988
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC---hHHHHHHHhhhccCCCCCCHHHHHHHHH
Q 022386 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---PEEIRSKATDYMAAYKFGEKWDIAMAAL 241 (298)
Q Consensus 165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~dva~~~~ 241 (298)
....|++||++++.++++++.+++ ++||+||+|+||+++|++...... ..+......... .+.+|+|+|+.++
T Consensus 147 ~~~~Y~~sK~a~~~~~~~la~~~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~dvA~~i~ 222 (254)
T 1sby_A 147 QVPVYSASKAAVVSFTNSLAKLAP-ITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSH---PTQTSEQCGQNFV 222 (254)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHH-HHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTS---CCEEHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHhc-cCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhcC---CCCCHHHHHHHHH
Confidence 899999999999999999999986 679999999999999986433211 011112222222 2458999999999
Q ss_pred HhcCCCCCCccccEEEeCCCCC
Q 022386 242 YLASDAGKYVNGNTLIVDGGNW 263 (298)
Q Consensus 242 ~L~s~~~~~~~G~~i~~dgG~~ 263 (298)
++++ .+.+|+.+.+|||..
T Consensus 223 ~~~~---~~~~G~~~~v~gG~~ 241 (254)
T 1sby_A 223 KAIE---ANKNGAIWKLDLGTL 241 (254)
T ss_dssp HHHH---HCCTTCEEEEETTEE
T ss_pred HHHH---cCCCCCEEEEeCCce
Confidence 9985 568999999999953
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-38 Score=275.63 Aligned_cols=228 Identities=23% Similarity=0.229 Sum_probs=187.5
Q ss_pred CCCCCCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCC-CCeEEEEccCCCH-HHHHH
Q 022386 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKR-EDAVR 78 (298)
Q Consensus 1 ~~~~~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dls~~-~~~~~ 78 (298)
|...+.+.++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+ .++.++.||++++ +++++
T Consensus 1 m~~~~~~~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~ 80 (311)
T 3o26_A 1 MPETCPNTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSS 80 (311)
T ss_dssp -----------CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHH
T ss_pred CCCCCCCccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHH
Confidence 455566678899999999999999999999999999999999999999999888887765 4799999999997 99999
Q ss_pred HHHHHHHHhCCccEEEECCCCCCC------------------------------CCCCCCCHHHHHHHHHhhhHHHHHHH
Q 022386 79 VVESTINHFGKLDILVNAAAGNFL------------------------------VPAEDLSPNGFRTVIEIDSVGTFIMC 128 (298)
Q Consensus 79 ~~~~~~~~~~~id~li~~ag~~~~------------------------------~~~~~~~~~~~~~~~~~n~~~~~~l~ 128 (298)
+++.+.+.++++|+||||||+... .++.+.+.++|++.|++|+.|+++++
T Consensus 81 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~ 160 (311)
T 3o26_A 81 LADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVT 160 (311)
T ss_dssp HHHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHH
Confidence 999999999999999999997632 24456688999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC-------------------------------------------CC
Q 022386 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-------------------------------------------WY 165 (298)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~-------------------------------------------~~ 165 (298)
++++|+|++++ .|+||++||..+..+. +.
T Consensus 161 ~~~~~~l~~~~--------~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (311)
T 3o26_A 161 EVLIPLLQLSD--------SPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSF 232 (311)
T ss_dssp HHHHHHHTTSS--------SCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSS
T ss_pred HHhhHhhccCC--------CCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCccc
Confidence 99999998765 6899999999886543 34
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcC
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s 245 (298)
...|++||++++.++++++.|++ +|+||+|+||+|+|++.... ...++++.++.+++++.
T Consensus 233 ~~~Y~~SK~a~~~~~~~la~e~~---~i~v~~v~PG~v~T~~~~~~-----------------~~~~~~~~a~~~~~~~~ 292 (311)
T 3o26_A 233 GAAYTTSKACLNAYTRVLANKIP---KFQVNCVCPGLVKTEMNYGI-----------------GNYTAEEGAEHVVRIAL 292 (311)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHCT---TSEEEEECCCSBCSGGGTTC-----------------CSBCHHHHHHHHHHHHT
T ss_pred chhhHHHHHHHHHHHHHHHhhcC---CceEEEecCCceecCCcCCC-----------------CCCCHHHHHHHHHHHHh
Confidence 57899999999999999999986 49999999999998864332 12488999999999887
Q ss_pred CCCCCccccEE
Q 022386 246 DAGKYVNGNTL 256 (298)
Q Consensus 246 ~~~~~~~G~~i 256 (298)
.+....+|..+
T Consensus 293 ~~~~~~~g~~~ 303 (311)
T 3o26_A 293 FPDDGPSGFFY 303 (311)
T ss_dssp CCSSCCCSCEE
T ss_pred CCCCCCCceEe
Confidence 55444455444
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=269.33 Aligned_cols=222 Identities=16% Similarity=0.188 Sum_probs=197.2
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
...+|++|+++||||++|||+++++.|+++|++|++++|+.+.++++.+++.+.+.++.++.+|++|+++++++++++.+
T Consensus 25 ~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 104 (272)
T 1yb1_A 25 RRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKA 104 (272)
T ss_dssp CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999888888888887778899999999999999999999999
Q ss_pred HhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC
Q 022386 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~ 165 (298)
.++++|++|||||.....++.+.+.++|++.+++|+.+++++++.++|.|.+++ .++||++||..+..+.+.
T Consensus 105 ~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~ 176 (272)
T 1yb1_A 105 EIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN--------HGHIVTVASAAGHVSVPF 176 (272)
T ss_dssp HTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--------CEEEEEECCCC-CCCHHH
T ss_pred HCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--------CCEEEEEechhhcCCCCC
Confidence 999999999999987777777788899999999999999999999999998765 689999999999888778
Q ss_pred chhhHHHHHHHHHHHHHHHHHhc--CCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHh
Q 022386 166 QIHVSAAKAAVDSITRSLALEWG--TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~--~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L 243 (298)
...|++||++++.++++++.|+. .+.||+|++|+||+++|++... . ..+..++.+|+|+|+.++++
T Consensus 177 ~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~----~--------~~~~~~~~~~~dva~~i~~~ 244 (272)
T 1yb1_A 177 LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN----P--------STSLGPTLEPEEVVNRLMHG 244 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC----T--------HHHHCCCCCHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc----c--------cccccCCCCHHHHHHHHHHH
Confidence 89999999999999999999984 1458999999999999886321 0 12345688999999999999
Q ss_pred cCCC
Q 022386 244 ASDA 247 (298)
Q Consensus 244 ~s~~ 247 (298)
+...
T Consensus 245 ~~~~ 248 (272)
T 1yb1_A 245 ILTE 248 (272)
T ss_dssp HHTT
T ss_pred HHcC
Confidence 9764
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-38 Score=269.06 Aligned_cols=239 Identities=19% Similarity=0.150 Sum_probs=199.2
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcC---CcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHG---AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVE 81 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G---~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~ 81 (298)
....++++|++|||||++|||++++++|+++| ++|++++|+.+..+.+ +++...+.++.++.||+++.++++++++
T Consensus 14 ~~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~~~~~~~~~~Dl~~~~~v~~~~~ 92 (267)
T 1sny_A 14 LVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKNHSNIHILEIDLRNFDAYDKLVA 92 (267)
T ss_dssp ------CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHHCTTEEEEECCTTCGGGHHHHHH
T ss_pred ccccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhccCCceEEEEecCCChHHHHHHHH
Confidence 44568899999999999999999999999999 9999999997765543 3444446689999999999999999999
Q ss_pred HHHHHhC--CccEEEECCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCC---CCCCCCCcEEEEec
Q 022386 82 STINHFG--KLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG---QASSSSGGIIINIS 155 (298)
Q Consensus 82 ~~~~~~~--~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~---~~~~~~~g~iv~vs 155 (298)
++.+.++ ++|++|||||... ..++.+.+.+++++.+++|+.++++++++++|.|.++... .......++||++|
T Consensus 93 ~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~is 172 (267)
T 1sny_A 93 DIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMS 172 (267)
T ss_dssp HHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEEC
T ss_pred HHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEe
Confidence 9999998 8999999999876 6777788999999999999999999999999999875100 00000137899999
Q ss_pred ccccccCCC---CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCC
Q 022386 156 ATLHYTATW---YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGE 232 (298)
Q Consensus 156 s~~~~~~~~---~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (298)
|..+..+.+ ....|++||++++.+++.++.|++ ++||++++|+||+++|++... ....+
T Consensus 173 S~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~v~t~~~~~-----------------~~~~~ 234 (267)
T 1sny_A 173 SILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLY-PQRIMCVSLHPGWVKTDMGGS-----------------SAPLD 234 (267)
T ss_dssp CGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEECCCSBCSTTTCT-----------------TCSBC
T ss_pred cccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhh-cCCcEEEEeCCcceecCCCCC-----------------CCCCC
Confidence 998876653 677899999999999999999997 779999999999999886421 13578
Q ss_pred HHHHHHHHHHhcCCCCCCccccEEEeCCCC
Q 022386 233 KWDIAMAALYLASDAGKYVNGNTLIVDGGN 262 (298)
Q Consensus 233 ~~dva~~~~~L~s~~~~~~~G~~i~~dgG~ 262 (298)
|+++|+.++++++......+|+.+.+||+.
T Consensus 235 ~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~ 264 (267)
T 1sny_A 235 VPTSTGQIVQTISKLGEKQNGGFVNYDGTP 264 (267)
T ss_dssp HHHHHHHHHHHHHHCCGGGTTCEECTTSCB
T ss_pred HHHHHHHHHHHHHhcCcCCCCcEEccCCcC
Confidence 999999999999888888999999999884
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-38 Score=286.92 Aligned_cols=261 Identities=15% Similarity=0.064 Sum_probs=211.4
Q ss_pred CCCcEEEEecCCchhHHH--HHHHHHHcCCcEEEEcCChhH------------HHHHHHHHHhCCCCeEEEEccCCCHHH
Q 022386 10 LKGKVALLTGGGSGIGFE--ISLQLGKHGAAIAIMGRRKTV------------LRSAVAALHSLGIPAIGLEGDVRKRED 75 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~--ia~~l~~~G~~Vv~~~r~~~~------------~~~~~~~~~~~~~~~~~~~~Dls~~~~ 75 (298)
..||++|||||++|||++ +++.|+++|++|++++|+... .+.+.+.+.+.+.++.++.||++++++
T Consensus 58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~ 137 (418)
T 4eue_A 58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET 137 (418)
T ss_dssp CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence 679999999999999999 999999999999999987432 344555566678889999999999999
Q ss_pred HHHHHHHHHHHhCCccEEEECCCCC-------------CCCCC---------------------CCCCHHHHHHHHHhhh
Q 022386 76 AVRVVESTINHFGKLDILVNAAAGN-------------FLVPA---------------------EDLSPNGFRTVIEIDS 121 (298)
Q Consensus 76 ~~~~~~~~~~~~~~id~li~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n~ 121 (298)
++++++.+.+.+|++|+||||||.. ..+++ .+.+.++|+..+++|.
T Consensus 138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~ 217 (418)
T 4eue_A 138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMG 217 (418)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhh
Confidence 9999999999999999999999974 22333 3568999999999999
Q ss_pred HHHH-HHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc--hhhHHHHHHHHHHHHHHHHHhcCC-CCeEEEE
Q 022386 122 VGTF-IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ--IHVSAAKAAVDSITRSLALEWGTD-YAIRVNG 197 (298)
Q Consensus 122 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~--~~Y~~sK~a~~~l~~~la~e~~~~-~girv~~ 197 (298)
.+.+ ++++.+.+.+.... +|+||++||..+..+.+.. ..|++||+|+.+|+++++.|++ + +|||||+
T Consensus 218 ~~~~~~~~~~l~~~~~~~~--------gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa-~~~GIrVN~ 288 (418)
T 4eue_A 218 GEDWQEWCEELLYEDCFSD--------KATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLN-RVIGGRAFV 288 (418)
T ss_dssp SHHHHHHHHHHHHTTCEEE--------EEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHH-HHHSCEEEE
T ss_pred HHHHHHHHHHHHHHhhhcC--------CcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhC-CccCeEEEE
Confidence 9988 77787776544333 5899999999998888877 9999999999999999999998 8 8999999
Q ss_pred EeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCC-CchhHHH
Q 022386 198 IAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRD-LPKEAVN 276 (298)
Q Consensus 198 i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~-~~~~~~~ 276 (298)
|+||++.|++.......+....... .++++.+++|++++.+.+|+++ ...+|+.+.+|+|..++..+| +.+.+.+
T Consensus 289 V~PG~v~T~~s~~ip~~p~y~~~~~--~~mk~~G~~E~v~e~~~~L~sd--~~~~g~~~~~D~~~~~r~d~~e~~~~~q~ 364 (418)
T 4eue_A 289 SVNKALVTKASAYIPTFPLYAAILY--KVMKEKNIHENCIMQIERMFSE--KIYSNEKIQFDDKGRLRMDDLELRKDVQD 364 (418)
T ss_dssp EECCCCCCHHHHTSTTHHHHHHHHH--HHHHHTTCCCCHHHHHHHHHHH--TTSSSSCCCCCTTSCEESCTTTTCHHHHH
T ss_pred EECCcCcChhhhcCCCCcHHHHHHH--HHHhhcCChHHHHHHHHHHhhc--cccCCCccccCCCceeeCChhhcCHHHHH
Confidence 9999999986544322222222222 2456678999999999999987 667899999999888876664 5555655
Q ss_pred hhHHhhh
Q 022386 277 QLSRAVE 283 (298)
Q Consensus 277 ~~~~~~~ 283 (298)
++....+
T Consensus 365 ~~~~~~~ 371 (418)
T 4eue_A 365 EVDRIWS 371 (418)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5544433
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-38 Score=279.88 Aligned_cols=235 Identities=20% Similarity=0.227 Sum_probs=186.2
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHh------CCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS------LGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~------~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
++|+++||||++|||++++++|+++|++|++++|+...+++..+.+.. .+.++.++.+|++|+++++++++++
T Consensus 1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~- 79 (327)
T 1jtv_A 1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERV- 79 (327)
T ss_dssp CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTC-
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHH-
Confidence 479999999999999999999999999998887765443333333322 2467899999999999999999988
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~ 164 (298)
.++++|+||||||+....++.+.+.++|++++++|+.++++++++++|+|++++ .|+||++||..+..+.+
T Consensus 80 -~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~--------~g~IV~isS~~~~~~~~ 150 (327)
T 1jtv_A 80 -TEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG--------SGRVLVTGSVGGLMGLP 150 (327)
T ss_dssp -TTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEEEEGGGTSCCT
T ss_pred -hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--------CCEEEEECCcccccCCC
Confidence 358999999999987777788889999999999999999999999999998765 68999999999998888
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCCh---------HHHHHHHhhh-----ccCCCC
Q 022386 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP---------EEIRSKATDY-----MAAYKF 230 (298)
Q Consensus 165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~---------~~~~~~~~~~-----~~~~~~ 230 (298)
....|++||++++.|+++++.|++ ++||+||+|+||+|+|++....... ++....+... .+.+++
T Consensus 151 ~~~~Y~aSK~a~~~~~~~la~el~-~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (327)
T 1jtv_A 151 FNDVYCASKFALEGLCESLAVLLL-PFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREA 229 (327)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhhhc
Confidence 899999999999999999999998 7899999999999999875432211 1111111000 122333
Q ss_pred -CCHHHHHHHHHHhcCC---CCCCccccEE
Q 022386 231 -GEKWDIAMAALYLASD---AGKYVNGNTL 256 (298)
Q Consensus 231 -~~~~dva~~~~~L~s~---~~~~~~G~~i 256 (298)
.+|+|+|+.++++++. ...|++|+.+
T Consensus 230 ~~~pedvA~~i~~l~~~~~~~~~~~tg~~~ 259 (327)
T 1jtv_A 230 AQNPEEVAEVFLTALRAPKPTLRYFTTERF 259 (327)
T ss_dssp CBCHHHHHHHHHHHHHCSSCCSEEESCSTT
T ss_pred CCCHHHHHHHHHHHHcCCCCCeEEEeCchH
Confidence 5899999999999874 3557777653
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=272.28 Aligned_cols=219 Identities=21% Similarity=0.262 Sum_probs=173.5
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
|+++||||++|||++++++|+++|++|++++|+.+.++. . +.+|+++.++++++++++ ++++|+
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~------------~-~~~Dl~~~~~v~~~~~~~---~~~id~ 65 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA------------D-LSTAEGRKQAIADVLAKC---SKGMDG 65 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------------C-TTSHHHHHHHHHHHHTTC---TTCCSE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc------------c-cccCCCCHHHHHHHHHHh---CCCCCE
Confidence 689999999999999999999999999999998653221 1 678999999999888733 389999
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc------------
Q 022386 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY------------ 160 (298)
Q Consensus 93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~------------ 160 (298)
+|||||..... +.|++.+++|+.++++++++++|.|++++ .|+||++||..+.
T Consensus 66 lv~~Ag~~~~~-------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~~~~~ 130 (257)
T 1fjh_A 66 LVLCAGLGPQT-------KVLGNVVSVNYFGATELMDAFLPALKKGH--------QPAAVVISSVASAHLAFDKNPLALA 130 (257)
T ss_dssp EEECCCCCTTC-------SSHHHHHHHHTHHHHHHHHHHHHHHHTSS--------SCEEEEECCGGGGSSCGGGCTTHHH
T ss_pred EEECCCCCCCc-------ccHHHHHHHhhHHHHHHHHHHHHHHhhcC--------CcEEEEECChhhhccccccchhhhh
Confidence 99999975411 22899999999999999999999998765 5899999999887
Q ss_pred ----------------cCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhh-
Q 022386 161 ----------------TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD- 223 (298)
Q Consensus 161 ----------------~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~- 223 (298)
.+.+....|++||++++.+++.++.|++ ++||+||+|+||+++|++...... +........
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~ 208 (257)
T 1fjh_A 131 LEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWG-EAGVRLNTIAPGATETPLLQAGLQ-DPRYGESIAK 208 (257)
T ss_dssp HHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHH-HTTCEEEEEEECC----------------------
T ss_pred hcccchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEeeCCCCCccchhhcc-chhHHHHHHh
Confidence 3444678999999999999999999997 779999999999999986543211 111111112
Q ss_pred -hccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCC
Q 022386 224 -YMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 224 -~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
..+.+++.+|+|+|+.+++|+++++.+++|+.+.+|||..+
T Consensus 209 ~~~~~~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~~~ 250 (257)
T 1fjh_A 209 FVPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDA 250 (257)
T ss_dssp CCCSTTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred cccccCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECCCccc
Confidence 45677899999999999999998888999999999999754
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-38 Score=267.62 Aligned_cols=225 Identities=20% Similarity=0.223 Sum_probs=161.9
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
+|+||++|||||++|||+++|++|++ |+.|++++|+.+.+++..+ ..++.++.+|+++.++ .+.+.+..+.++
T Consensus 2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~-~~~~~~~~~~~~ 74 (245)
T 3e9n_A 2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-----IEGVEPIESDIVKEVL-EEGGVDKLKNLD 74 (245)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-----STTEEEEECCHHHHHH-TSSSCGGGTTCS
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-----hcCCcceecccchHHH-HHHHHHHHHhcC
Confidence 57899999999999999999999988 9999999999876655443 2458899999999877 555555666789
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchh
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~ 168 (298)
++|++|||||+....++.+.+.++|++.+++|+.++++++++++|.|+++ +|+||++||..+..+.+....
T Consensus 75 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~~ 145 (245)
T 3e9n_A 75 HVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAA---------SGCVIYINSGAGNGPHPGNTI 145 (245)
T ss_dssp CCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---------TCEEEEEC----------CHH
T ss_pred CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc---------CCeEEEEcCcccccCCCCchH
Confidence 99999999998877888888999999999999999999999999999875 488999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCC
Q 022386 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (298)
Q Consensus 169 Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~ 248 (298)
|++||+|++.|+++++.|++ ++||+||+|+||+++|++....... .....+..++.+|+|+|++++||++...
T Consensus 146 Y~asK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~------~~~~~~~~~~~~p~dvA~~i~~l~~~~~ 218 (245)
T 3e9n_A 146 YAASKHALRGLADAFRKEEA-NNGIRVSTVSPGPTNTPMLQGLMDS------QGTNFRPEIYIEPKEIANAIRFVIDAGE 218 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCC----------------------CCGGGSCHHHHHHHHHHHHTSCT
T ss_pred HHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecCCccCchhhhhhhh------hhcccccccCCCHHHHHHHHHHHHcCCC
Confidence 99999999999999999998 7899999999999998865433211 1122345668899999999999997654
Q ss_pred CCccccEEEeC
Q 022386 249 KYVNGNTLIVD 259 (298)
Q Consensus 249 ~~~~G~~i~~d 259 (298)
++..+++|
T Consensus 219 ---~~~~~~i~ 226 (245)
T 3e9n_A 219 ---TTQITNVD 226 (245)
T ss_dssp ---TEEEEEEE
T ss_pred ---ccceeeeE
Confidence 34555543
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-37 Score=264.29 Aligned_cols=222 Identities=23% Similarity=0.280 Sum_probs=191.1
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHH-cCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGK-HGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~-~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
.++|++|||||++|||++++++|++ +|++|++++|+.+..++..+++...+.++.++.+|++|.++++++++++.+.++
T Consensus 2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 81 (276)
T 1wma_A 2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG 81 (276)
T ss_dssp CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 4689999999999999999999999 999999999998888888888887777899999999999999999999999999
Q ss_pred CccEEEECCCCCCCCCCCCCC-HHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC-----
Q 022386 89 KLDILVNAAAGNFLVPAEDLS-PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA----- 162 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~----- 162 (298)
++|++|||||....... +.+ .++++..+++|+.+++++++++++.|++ .|+||++||..+..+
T Consensus 82 ~id~li~~Ag~~~~~~~-~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~----------~g~iv~~sS~~~~~~~~~~~ 150 (276)
T 1wma_A 82 GLDVLVNNAGIAFKVAD-PTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP----------QGRVVNVSSIMSVRALKSCS 150 (276)
T ss_dssp SEEEEEECCCCCCCTTC-CSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE----------EEEEEEECCHHHHHHHHTSC
T ss_pred CCCEEEECCcccccCCC-ccccHHHHHhhhheeeeeHHHHHHHHHHhhCC----------CCEEEEECChhhhcccccCC
Confidence 99999999997654332 334 5899999999999999999999999864 378999999876532
Q ss_pred ------------------------------------CCCchhhHHHHHHHHHHHHHHHHHhcCC----CCeEEEEEeCCc
Q 022386 163 ------------------------------------TWYQIHVSAAKAAVDSITRSLALEWGTD----YAIRVNGIAPGP 202 (298)
Q Consensus 163 ------------------------------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~----~girv~~i~PG~ 202 (298)
..+...|++||++++.+++.++.+++ + .||+|++|+||+
T Consensus 151 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~-~~~~~~~i~v~~v~PG~ 229 (276)
T 1wma_A 151 PELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLS-EQRKGDKILLNACCPGW 229 (276)
T ss_dssp HHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHH-HHCTTSCCEEEEEECCS
T ss_pred hhHHhhccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhh-cccCCCceEEEEecCCc
Confidence 01237899999999999999999996 5 699999999999
Q ss_pred ccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCC--CCCccccEEEeCCC
Q 022386 203 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA--GKYVNGNTLIVDGG 261 (298)
Q Consensus 203 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~--~~~~~G~~i~~dgG 261 (298)
+.|++... ..+.+|+|+|+.+++|++.+ ..+++|+.|. +++
T Consensus 230 v~t~~~~~-----------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~-~~~ 272 (276)
T 1wma_A 230 VRTDMAGP-----------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS-EKR 272 (276)
T ss_dssp BCSTTTCT-----------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TTE
T ss_pred cccCcCCc-----------------cccCChhHhhhhHhhhhcCcccccccCceEec-cCc
Confidence 99886432 24679999999999999854 4699999987 443
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-35 Score=258.75 Aligned_cols=221 Identities=22% Similarity=0.285 Sum_probs=189.7
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCC-CeEEEEccCCCHHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
+...+++||+++||||++|||++++++|+++|++|++++|+.+.++++.+++.+.+. ++.++.+|++|.++++++++++
T Consensus 21 ~~~~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~ 100 (286)
T 1xu9_A 21 FRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQA 100 (286)
T ss_dssp CCGGGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHH
T ss_pred CChhhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHH
Confidence 445568999999999999999999999999999999999999888888887766554 6889999999999999999999
Q ss_pred HHHhCCccEEEEC-CCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC
Q 022386 84 INHFGKLDILVNA-AAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (298)
Q Consensus 84 ~~~~~~id~li~~-ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~ 162 (298)
.+.++++|++||| +|... .++.+.+.+++++.+++|+.++++++++++|.|+++ .|+||++||..+..+
T Consensus 101 ~~~~g~iD~li~naag~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~---------~g~iv~isS~~~~~~ 170 (286)
T 1xu9_A 101 GKLMGGLDMLILNHITNTS-LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS---------NGSIVVVSSLAGKVA 170 (286)
T ss_dssp HHHHTSCSEEEECCCCCCC-CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---------TCEEEEEEEGGGTSC
T ss_pred HHHcCCCCEEEECCccCCC-CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC---------CCEEEEECCcccccC
Confidence 9999999999999 56543 345567899999999999999999999999999764 488999999999989
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHh--cCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHH
Q 022386 163 TWYQIHVSAAKAAVDSITRSLALEW--GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240 (298)
Q Consensus 163 ~~~~~~Y~~sK~a~~~l~~~la~e~--~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 240 (298)
.+....|++||++++.++++++.|+ . ..||+++.|+||+++|++....... .......+|+|+|+.+
T Consensus 171 ~~~~~~Y~asK~a~~~~~~~l~~e~~~~-~~~i~v~~v~Pg~v~t~~~~~~~~~----------~~~~~~~~~~~vA~~i 239 (286)
T 1xu9_A 171 YPMVAAYSASKFALDGFFSSIRKEYSVS-RVNVSITLCVLGLIDTETAMKAVSG----------IVHMQAAPKEECALEI 239 (286)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHHHH-TCCCEEEEEEECCBCCHHHHHHSCG----------GGGGGCBCHHHHHHHH
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHhhc-CCCeEEEEeecCccCChhHHHhccc----------cccCCCCCHHHHHHHH
Confidence 8899999999999999999999998 4 6699999999999998753221110 0112357999999999
Q ss_pred HHhcCC
Q 022386 241 LYLASD 246 (298)
Q Consensus 241 ~~L~s~ 246 (298)
+..+..
T Consensus 240 ~~~~~~ 245 (286)
T 1xu9_A 240 IKGGAL 245 (286)
T ss_dssp HHHHHT
T ss_pred HHHHhc
Confidence 988854
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-35 Score=301.69 Aligned_cols=242 Identities=17% Similarity=0.198 Sum_probs=199.2
Q ss_pred CCCCCCcEEEEecCCch-hHHHHHHHHHHcCCcEEEE-cCChhHHHHHHHHHHh----CCCCeEEEEccCCCHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSG-IGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHS----LGIPAIGLEGDVRKREDAVRVV 80 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~g-iG~~ia~~l~~~G~~Vv~~-~r~~~~~~~~~~~~~~----~~~~~~~~~~Dls~~~~~~~~~ 80 (298)
..+|+||++|||||++| ||+++|+.|+++|++|+++ +|+.+.+++..+++.+ .+.++.++.||++|.+++++++
T Consensus 670 ~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv 749 (1887)
T 2uv8_A 670 GVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALI 749 (1887)
T ss_dssp CBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHH
T ss_pred cCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHH
Confidence 34689999999999998 9999999999999999998 6777777666666532 2567899999999999999999
Q ss_pred HHHHHH-----hC-CccEEEECCCCCCCC-CCCCCC--HHHHHHHHHhhhHHHHHHHHHH--HHHHHhcCCCCCCCCCCc
Q 022386 81 ESTINH-----FG-KLDILVNAAAGNFLV-PAEDLS--PNGFRTVIEIDSVGTFIMCHEA--LKYLKKGGRGQASSSSGG 149 (298)
Q Consensus 81 ~~~~~~-----~~-~id~li~~ag~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~~~~~~~~~~~~~~~g 149 (298)
+.+.+. || ++|+||||||+.... ++.+.+ .++|+++|++|+.+++++++++ +|.|.+++ +|
T Consensus 750 ~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~--------~G 821 (1887)
T 2uv8_A 750 EFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRP--------AQ 821 (1887)
T ss_dssp HHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCC--------EE
T ss_pred HHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCC--------CC
Confidence 999988 66 999999999987666 788888 8999999999999999999988 67776543 58
Q ss_pred EEEEecccccccCCCCchhhHHHHHHHHHH-HHHHHHHhcCCCCeEEEEEeCCccc-CCcccCcCChHHHHHHHhhhccC
Q 022386 150 IIINISATLHYTATWYQIHVSAAKAAVDSI-TRSLALEWGTDYAIRVNGIAPGPIK-DTAGVSKLAPEEIRSKATDYMAA 227 (298)
Q Consensus 150 ~iv~vss~~~~~~~~~~~~Y~~sK~a~~~l-~~~la~e~~~~~girv~~i~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~ 227 (298)
+||++||..+..+ ....|++||+|+.+| ++.++.+++ ++ |+||+|+||+++ |++......... .....+.
T Consensus 822 ~IVnISS~ag~~g--g~~aYaASKAAL~~Lttr~lA~ela-~~-IrVNaV~PG~V~tT~m~~~~~~~~~----~~~~~pl 893 (1887)
T 2uv8_A 822 VILPMSPNHGTFG--GDGMYSESKLSLETLFNRWHSESWA-NQ-LTVCGAIIGWTRGTGLMSANNIIAE----GIEKMGV 893 (1887)
T ss_dssp EEEEECSCTTCSS--CBTTHHHHHHHGGGHHHHHHHSSCT-TT-EEEEEEEECCEECC-----CCTTHH----HHHTTSC
T ss_pred EEEEEcChHhccC--CCchHHHHHHHHHHHHHHHHHHHhC-CC-eEEEEEEecccccccccccchhHHH----HHHhcCC
Confidence 9999999988876 577899999999999 999999997 65 999999999999 665432111111 1222344
Q ss_pred CCCCCHHHHHHHHHHhcCCC-CCCccccEEEeC--CCCCCC
Q 022386 228 YKFGEKWDIAMAALYLASDA-GKYVNGNTLIVD--GGNWLS 265 (298)
Q Consensus 228 ~~~~~~~dva~~~~~L~s~~-~~~~~G~~i~~d--gG~~~~ 265 (298)
+..+|+|+|+.++||+++. +.+++|+.|.+| ||....
T Consensus 894 -r~~sPEEVA~avlfLaSd~~as~iTGq~I~VDVDGG~~~~ 933 (1887)
T 2uv8_A 894 -RTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFV 933 (1887)
T ss_dssp -CCEEHHHHHHHHHGGGSHHHHHHHHHSCEEEEESCSTTTS
T ss_pred -CCCCHHHHHHHHHHHhCCCccccccCcEEEEECCCCeecc
Confidence 5669999999999999987 789999999874 997654
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-34 Score=291.65 Aligned_cols=241 Identities=17% Similarity=0.207 Sum_probs=198.2
Q ss_pred CCCCCcEEEEecCCch-hHHHHHHHHHHcCCcEEEEc-CChhHHHHHHHHHH----hCCCCeEEEEccCCCHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSG-IGFEISLQLGKHGAAIAIMG-RRKTVLRSAVAALH----SLGIPAIGLEGDVRKREDAVRVVE 81 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~g-iG~~ia~~l~~~G~~Vv~~~-r~~~~~~~~~~~~~----~~~~~~~~~~~Dls~~~~~~~~~~ 81 (298)
++|+||++|||||++| ||+++|++|+++|++|++++ |+.+.+++..+++. ..+.++.++.||++|.++++++++
T Consensus 648 m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~ 727 (1878)
T 2uv9_A 648 LTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVN 727 (1878)
T ss_dssp BCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHH
Confidence 3688999999999999 99999999999999999985 65666655555542 236678999999999999999999
Q ss_pred HHHHH---hC-CccEEEECCCCCCCC-CCCCCC--HHHHHHHHHhhhHHHHHHHHH--HHHHHHhcCCCCCCCCCCcEEE
Q 022386 82 STINH---FG-KLDILVNAAAGNFLV-PAEDLS--PNGFRTVIEIDSVGTFIMCHE--ALKYLKKGGRGQASSSSGGIII 152 (298)
Q Consensus 82 ~~~~~---~~-~id~li~~ag~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~--~~~~~~~~~~~~~~~~~~g~iv 152 (298)
++.+. || ++|+||||||+.... ++.+.+ .++|+.+|++|+.+++++++. +++.|.+++ .|+||
T Consensus 728 ~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~--------~G~IV 799 (1878)
T 2uv9_A 728 YIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRP--------AQVIL 799 (1878)
T ss_dssp HHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCC--------EEECC
T ss_pred HHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCC--------CCEEE
Confidence 99988 89 999999999987766 788888 899999999999999999987 677776543 58999
Q ss_pred EecccccccCCCCchhhHHHHHHHHHHHHHHHHH-hcCCCCeEEEEEeCCccc-CCcccCcCChHHHHHHHhhhccCCCC
Q 022386 153 NISATLHYTATWYQIHVSAAKAAVDSITRSLALE-WGTDYAIRVNGIAPGPIK-DTAGVSKLAPEEIRSKATDYMAAYKF 230 (298)
Q Consensus 153 ~vss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e-~~~~~girv~~i~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (298)
++||..+..+ ....|++||+++.+|++.++.+ ++ ++ |+||+|+||+++ |++... .+.........+. +.
T Consensus 800 nISS~ag~~g--g~~aYaASKAAL~aLt~~laAeEla-~~-IrVNaVaPG~V~gT~m~~~----~~~~~~~~~~~pl-r~ 870 (1878)
T 2uv9_A 800 PLSPNHGTFG--NDGLYSESKLALETLFNRWYSESWG-NY-LTICGAVIGWTRGTGLMSA----NNLVAEGVEKLGV-RT 870 (1878)
T ss_dssp EECSCSSSSS--CCSSHHHHHHHHTTHHHHHHHSTTT-TT-EEEEEEEECCBCCTTSCSH----HHHTHHHHHTTTC-CC
T ss_pred EEcchhhccC--CchHHHHHHHHHHHHHHHHHHHHcC-CC-eEEEEEEecceecCccccc----chhhHHHHHhcCC-CC
Confidence 9999988876 4678999999999999876554 76 54 999999999999 876432 1111222233344 45
Q ss_pred CCHHHHHHHHHHhcCCCC-CCccccEEEe--CCCCCCC
Q 022386 231 GEKWDIAMAALYLASDAG-KYVNGNTLIV--DGGNWLS 265 (298)
Q Consensus 231 ~~~~dva~~~~~L~s~~~-~~~~G~~i~~--dgG~~~~ 265 (298)
.+|+|+|+.++||+++.+ .++||+.+.+ |||....
T Consensus 871 ~sPeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~ 908 (1878)
T 2uv9_A 871 FSQQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQFI 908 (1878)
T ss_dssp BCHHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGGC
T ss_pred CCHHHHHHHHHHHhCCcccccccCcEEEEEcCCCcccc
Confidence 699999999999999876 8999999986 5997654
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-36 Score=296.58 Aligned_cols=242 Identities=17% Similarity=0.198 Sum_probs=199.8
Q ss_pred CCCCCCcEEEEecCCch-hHHHHHHHHHHcCCcEEEE-cCChhHHHHHHHHHHhC----CCCeEEEEccCCCHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSG-IGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVV 80 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~g-iG~~ia~~l~~~G~~Vv~~-~r~~~~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~ 80 (298)
.++|+||++|||||++| ||+++|++|+++|++|+++ +|+.+.+++..+++.+. +.++.++.||++|.+++++++
T Consensus 471 ~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLV 550 (1688)
T 2pff_A 471 XVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALI 550 (1688)
T ss_dssp CCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHH
T ss_pred ccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHH
Confidence 34689999999999998 9999999999999999998 67766666666666332 567889999999999999999
Q ss_pred HHHHHH-----hC-CccEEEECCCCCCCC-CCCCCC--HHHHHHHHHhhhHHHHHHHHHH--HHHHHhcCCCCCCCCCCc
Q 022386 81 ESTINH-----FG-KLDILVNAAAGNFLV-PAEDLS--PNGFRTVIEIDSVGTFIMCHEA--LKYLKKGGRGQASSSSGG 149 (298)
Q Consensus 81 ~~~~~~-----~~-~id~li~~ag~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~~~~~~~~~~~~~~~g 149 (298)
+++.+. +| ++|+||||||+.... ++.+.+ .++|+++|++|+.+++.+++++ +|.|.+++ +|
T Consensus 551 e~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krg--------gG 622 (1688)
T 2pff_A 551 EFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRP--------AQ 622 (1688)
T ss_dssp HHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSC--------EE
T ss_pred HHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCC--------CC
Confidence 999988 77 999999999987666 788888 8999999999999999999998 77787654 58
Q ss_pred EEEEecccccccCCCCchhhHHHHHHHHHH-HHHHHHHhcCCCCeEEEEEeCCccc-CCcccCcCChHHHHHHHhhhccC
Q 022386 150 IIINISATLHYTATWYQIHVSAAKAAVDSI-TRSLALEWGTDYAIRVNGIAPGPIK-DTAGVSKLAPEEIRSKATDYMAA 227 (298)
Q Consensus 150 ~iv~vss~~~~~~~~~~~~Y~~sK~a~~~l-~~~la~e~~~~~girv~~i~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~ 227 (298)
+||++||..+..+ ....|++||+|+.+| ++.++.+++ +. |+||+|+||+++ |++.... +.........+.
T Consensus 623 rIVnISSiAG~~G--g~saYaASKAAL~aLttrsLAeEla-~~-IRVNaVaPG~V~TT~M~~~~----e~~~~~l~~ipl 694 (1688)
T 2pff_A 623 VILPMSPNHGTFG--GDGMYSESKLSLETLFNRWHSESWA-NQ-LTVCGAIIGWTRGTGLMSAN----NIIAEGIEKMGV 694 (1688)
T ss_dssp ECCCCCSCTTTSS--CBTTHHHHHHHHTHHHHHTTTSSCT-TT-EECCCCCCCCCCCCSSSCTT----TTCSTTTSSSSC
T ss_pred EEEEEEChHhccC--CchHHHHHHHHHHHHHHHHHHHHcC-CC-eEEEEEEECcCcCCcccCCc----hHHHHHHHhCCC
Confidence 9999999988876 567999999999999 788888887 55 999999999999 5553321 000111122333
Q ss_pred CCCCCHHHHHHHHHHhcCCC-CCCccccEEEeC--CCCCCC
Q 022386 228 YKFGEKWDIAMAALYLASDA-GKYVNGNTLIVD--GGNWLS 265 (298)
Q Consensus 228 ~~~~~~~dva~~~~~L~s~~-~~~~~G~~i~~d--gG~~~~ 265 (298)
+..+|+|+|+.++||+++. +.+++|+.+.+| ||....
T Consensus 695 -R~~sPEEVA~aIlFLaSd~sAs~ITGq~I~VDVDGG~~~~ 734 (1688)
T 2pff_A 695 -RTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFV 734 (1688)
T ss_dssp -CCCCCCTTHHHHHHHTSTTHHHHHTTSCCCCCCSCSGGGS
T ss_pred -CCCCHHHHHHHHHHHhCCCccccccCcEEEEEcCCCeeec
Confidence 4569999999999999987 689999999875 997664
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-33 Score=231.62 Aligned_cols=198 Identities=18% Similarity=0.236 Sum_probs=173.9
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l 93 (298)
+++||||++|||++++++|+ +|++|++++|+.+ ++.+|++++++++++++.+ +++|++
T Consensus 5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~----~~~d~v 62 (202)
T 3d7l_A 5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------------DVTVDITNIDSIKKMYEQV----GKVDAI 62 (202)
T ss_dssp EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------------SEECCTTCHHHHHHHHHHH----CCEEEE
T ss_pred EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------------ceeeecCCHHHHHHHHHHh----CCCCEE
Confidence 79999999999999999999 9999999999864 3789999999999998764 799999
Q ss_pred EECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHHHH
Q 022386 94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAK 173 (298)
Q Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK 173 (298)
|||||.....++.+.+.++|++.+++|+.+++++++++.+.|++ +++||++||..+..+.+....|+++|
T Consensus 63 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~----------~~~iv~~sS~~~~~~~~~~~~Y~~sK 132 (202)
T 3d7l_A 63 VSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND----------KGSFTLTTGIMMEDPIVQGASAAMAN 132 (202)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE----------EEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred EECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc----------CCEEEEEcchhhcCCCCccHHHHHHH
Confidence 99999877677778899999999999999999999999998854 47899999999988888899999999
Q ss_pred HHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCCCCccc
Q 022386 174 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNG 253 (298)
Q Consensus 174 ~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G 253 (298)
++++.+++.++.|+ ++||+++.|+||++.|++.. .....+...+.+++|+|+++++++. .+.+|
T Consensus 133 ~~~~~~~~~~~~e~--~~gi~v~~v~pg~v~~~~~~-----------~~~~~~~~~~~~~~dva~~~~~~~~---~~~~G 196 (202)
T 3d7l_A 133 GAVTAFAKSAAIEM--PRGIRINTVSPNVLEESWDK-----------LEPFFEGFLPVPAAKVARAFEKSVF---GAQTG 196 (202)
T ss_dssp HHHHHHHHHHTTSC--STTCEEEEEEECCBGGGHHH-----------HGGGSTTCCCBCHHHHHHHHHHHHH---SCCCS
T ss_pred HHHHHHHHHHHHHc--cCCeEEEEEecCccCCchhh-----------hhhhccccCCCCHHHHHHHHHHhhh---ccccC
Confidence 99999999999997 45999999999999976421 1223456678899999999988883 56899
Q ss_pred cEEEeC
Q 022386 254 NTLIVD 259 (298)
Q Consensus 254 ~~i~~d 259 (298)
+.+++|
T Consensus 197 ~~~~vd 202 (202)
T 3d7l_A 197 ESYQVY 202 (202)
T ss_dssp CEEEEC
T ss_pred ceEecC
Confidence 999987
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-32 Score=227.37 Aligned_cols=200 Identities=16% Similarity=0.098 Sum_probs=170.1
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
|+++||||++|||++++++|+++ +|++++|+.+.+++..+.+.. .++.+|++|++++++++++ ++++|+
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~D~~~~~~~~~~~~~----~~~id~ 69 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-----RALPADLADELEAKALLEE----AGPLDL 69 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-----EECCCCTTSHHHHHHHHHH----HCSEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-----cEEEeeCCCHHHHHHHHHh----cCCCCE
Confidence 68999999999999999999998 999999998777776665531 7889999999999999886 789999
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHHH
Q 022386 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 172 (298)
Q Consensus 93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~s 172 (298)
+|||||.....++.+.+.++|++.+++|+.+++++++++ .+.+ .++||++||..++.+.++...|++|
T Consensus 70 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~--------~~~iv~~sS~~~~~~~~~~~~Y~~s 137 (207)
T 2yut_A 70 LVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQK--------GARAVFFGAYPRYVQVPGFAAYAAA 137 (207)
T ss_dssp EEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEE--------EEEEEEECCCHHHHSSTTBHHHHHH
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcC--------CcEEEEEcChhhccCCCCcchHHHH
Confidence 999999877777778888999999999999999999998 2222 4889999999998888889999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCC
Q 022386 173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (298)
Q Consensus 173 K~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~ 248 (298)
|++++.+++.++.|++ ++||+++.|+||++.|++... ...+.+++.+++|+|+++++++..+.
T Consensus 138 K~a~~~~~~~~~~~~~-~~gi~v~~v~pg~v~t~~~~~------------~~~~~~~~~~~~dva~~~~~~~~~~~ 200 (207)
T 2yut_A 138 KGALEAYLEAARKELL-REGVHLVLVRLPAVATGLWAP------------LGGPPKGALSPEEAARKVLEGLFREP 200 (207)
T ss_dssp HHHHHHHHHHHHHHHH-TTTCEEEEECCCCBCSGGGGG------------GTSCCTTCBCHHHHHHHHHHHHC--C
T ss_pred HHHHHHHHHHHHHHHh-hhCCEEEEEecCcccCCCccc------------cCCCCCCCCCHHHHHHHHHHHHhCCC
Confidence 9999999999999997 789999999999999875211 11345778999999999999997643
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-33 Score=239.83 Aligned_cols=220 Identities=20% Similarity=0.275 Sum_probs=178.2
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
|++|||||++|||++++++|+++|++|++++|+.+..+. .+.+|+++.++++++++++ .+++|+
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------------~~~~D~~~~~~~~~~~~~~---~~~~d~ 65 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-------------DLSTPGGRETAVAAVLDRC---GGVLDG 65 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------------CTTSHHHHHHHHHHHHHHH---TTCCSE
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-------------cccCCcccHHHHHHHHHHc---CCCccE
Confidence 689999999999999999999999999999998653211 1678999999999888754 379999
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC---------
Q 022386 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--------- 163 (298)
Q Consensus 93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~--------- 163 (298)
+|||||.... .+.++..+++|+.+++++++++.+.|.+.+ .++||++||..++.+.
T Consensus 66 vi~~Ag~~~~-------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~~~~~ 130 (255)
T 2dkn_A 66 LVCCAGVGVT-------AANSGLVVAVNYFGVSALLDGLAEALSRGQ--------QPAAVIVGSIAATQPGAAELPMVEA 130 (255)
T ss_dssp EEECCCCCTT-------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSS--------SCEEEEECCGGGGSTTGGGCHHHHH
T ss_pred EEECCCCCCc-------chhHHHHHHHHhHHHHHHHHHHHHHhhhcC--------CceEEEEeccccccccccccchhhh
Confidence 9999996431 123788999999999999999999998764 5889999999887654
Q ss_pred -----------------CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhc-
Q 022386 164 -----------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM- 225 (298)
Q Consensus 164 -----------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~- 225 (298)
++...|+.||++++.+++.++.++. ++||+++.++||++.|+........ ..........
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~-~~gi~v~~v~pg~v~~~~~~~~~~~-~~~~~~~~~~~ 208 (255)
T 2dkn_A 131 MLAGDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWA-GRGVRLNVVAPGAVETPLLQASKAD-PRYGESTRRFV 208 (255)
T ss_dssp HHHTCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHH-HTTCEEEEEEECCBCSHHHHHHHHC-TTTHHHHHSCC
T ss_pred hcccchhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHh-hcCcEEEEEcCCcccchhhhhcccc-hhhHHHHHHHH
Confidence 4567899999999999999999987 6799999999999998754221000 0001111122
Q ss_pred -cCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 226 -AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 226 -~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
+.+++.+++|+|+++++++++.+.+++|+.++++||..++
T Consensus 209 ~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~ 249 (255)
T 2dkn_A 209 APLGRGSEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDAL 249 (255)
T ss_dssp CTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHH
T ss_pred HHhcCCCCHHHHHHHHHHHhCCCcccceeeEEEecCCeEee
Confidence 6678899999999999999987778999999999997653
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-32 Score=252.47 Aligned_cols=219 Identities=15% Similarity=0.111 Sum_probs=182.7
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCc-EEEE-cCC-------------hhHHHHHHHHHHhCCCCeEEEEccCCCHHH
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAA-IAIM-GRR-------------KTVLRSAVAALHSLGIPAIGLEGDVRKRED 75 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~-Vv~~-~r~-------------~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~ 75 (298)
.++++|||||++|||++++++|+++|++ |+++ +|+ .+.++++.+++.+.+.++.++.||++|.++
T Consensus 250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~ 329 (525)
T 3qp9_A 250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA 329 (525)
T ss_dssp TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence 5899999999999999999999999997 6777 888 355677778888888899999999999999
Q ss_pred HHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEec
Q 022386 76 AVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS 155 (298)
Q Consensus 76 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vs 155 (298)
++++++.+. +++++|++|||||+...+.+.+.+.++|+++|++|+.|++++.+++.+.+++++. .++||++|
T Consensus 330 v~~~~~~i~-~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~-------~~~iV~~S 401 (525)
T 3qp9_A 330 AARLLAGVS-DAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGR-------PPVLVLFS 401 (525)
T ss_dssp HHHHHHTSC-TTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----C-------CCEEEEEE
T ss_pred HHHHHHHHH-hcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCC-------CCEEEEEC
Confidence 999999998 7899999999999988888999999999999999999999999999999876421 37899999
Q ss_pred ccccccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHH
Q 022386 156 ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWD 235 (298)
Q Consensus 156 s~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 235 (298)
|..+..+.++...|+++|++++.|+ .++. ..||++++|+||+++|++.... .....+.. ......+|++
T Consensus 402 S~a~~~g~~g~~~YaaaKa~l~~lA----~~~~-~~gi~v~sI~pG~~~tgm~~~~----~~~~~~~~--~g~~~l~pee 470 (525)
T 3qp9_A 402 SVAAIWGGAGQGAYAAGTAFLDALA----GQHR-ADGPTVTSVAWSPWEGSRVTEG----ATGERLRR--LGLRPLAPAT 470 (525)
T ss_dssp EGGGTTCCTTCHHHHHHHHHHHHHH----TSCC-SSCCEEEEEEECCBTTSGGGSS----HHHHHHHH--TTBCCBCHHH
T ss_pred CHHHcCCCCCCHHHHHHHHHHHHHH----HHHH-hCCCCEEEEECCccccccccch----hhHHHHHh--cCCCCCCHHH
Confidence 9999999999999999999999885 4665 6799999999999987765321 11122221 1224579999
Q ss_pred HHHHHHHhcCCCC
Q 022386 236 IAMAALYLASDAG 248 (298)
Q Consensus 236 va~~~~~L~s~~~ 248 (298)
+++.+.++++...
T Consensus 471 ~a~~l~~~l~~~~ 483 (525)
T 3qp9_A 471 ALTALDTALGHGD 483 (525)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHhCCC
Confidence 9999999997654
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-30 Score=276.82 Aligned_cols=244 Identities=16% Similarity=0.074 Sum_probs=183.3
Q ss_pred CCCCCcEEEEecCCch-hHHHHHHHHHHcCCcEEEEcCChhH-----HHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSG-IGFEISLQLGKHGAAIAIMGRRKTV-----LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVE 81 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~g-iG~~ia~~l~~~G~~Vv~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~ 81 (298)
..|+||++|||||++| ||+++|+.|+++|++|++++|+.+. ++++.+++...+.++..+.||++|+++++++++
T Consensus 2132 ~~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~ 2211 (3089)
T 3zen_D 2132 XXXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVE 2211 (3089)
T ss_dssp CCCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred ccCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHH
Confidence 4589999999999999 9999999999999999999998766 566666666667788899999999999999999
Q ss_pred HHHH----HhCCccEEEECCCC----CCC-CCCCCCCH----HHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCC
Q 022386 82 STIN----HFGKLDILVNAAAG----NFL-VPAEDLSP----NGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSG 148 (298)
Q Consensus 82 ~~~~----~~~~id~li~~ag~----~~~-~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 148 (298)
++.+ .||++|+||||||+ ... ....+.+. ..++..+++|+.+++.+++.+.+.|....... ..
T Consensus 2212 ~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~----~~ 2287 (3089)
T 3zen_D 2212 WVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIAS----RL 2287 (3089)
T ss_dssp HHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCC----CE
T ss_pred HHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc----ee
Confidence 9998 89999999999997 111 12222232 33455699999999999999999998764211 01
Q ss_pred cEEEEecccccccCCCCchhhHHHHHHHHHHHHHHHHH--hcCCCCeEEEEEeCCccc-CCcccCcCChHHHHHHHhhhc
Q 022386 149 GIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE--WGTDYAIRVNGIAPGPIK-DTAGVSKLAPEEIRSKATDYM 225 (298)
Q Consensus 149 g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e--~~~~~girv~~i~PG~v~-t~~~~~~~~~~~~~~~~~~~~ 225 (298)
+.++++++..+.. +....|++||+|+.+|+++++.| ++ + +|+||+++||+++ |+++....... ......
T Consensus 2288 ~ii~~~ss~~g~~--g~~~aYsASKaAl~~LtrslA~E~~~a-~-~IrVn~v~PG~v~tT~l~~~~~~~~----~~~~~~ 2359 (3089)
T 3zen_D 2288 HVVLPGSPNRGMF--GGDGAYGEAKSALDALENRWSAEKSWA-E-RVSLAHALIGWTKGTGLMGQNDAIV----SAVEEA 2359 (3089)
T ss_dssp EEEEEECSSTTSC--SSCSSHHHHGGGHHHHHHHHHHCSTTT-T-TEEEEEEECCCEECSTTTTTTTTTH----HHHGGG
T ss_pred EEEEECCcccccC--CCchHHHHHHHHHHHHHHHHHhccccC-C-CeEEEEEeecccCCCcccccchhHH----HHHHhc
Confidence 2333444433322 34568999999999999999999 75 4 6999999999998 44332221111 112223
Q ss_pred cCCCCCCHHHHHHHHHHhcCCCCCCc-cccEEEeC--CCCCC
Q 022386 226 AAYKFGEKWDIAMAALYLASDAGKYV-NGNTLIVD--GGNWL 264 (298)
Q Consensus 226 ~~~~~~~~~dva~~~~~L~s~~~~~~-~G~~i~~d--gG~~~ 264 (298)
+.++ .+|+|+|..++||+|+.+.++ +|+.+.+| ||..-
T Consensus 2360 ~~r~-~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~ 2400 (3089)
T 3zen_D 2360 GVTT-YTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGD 2400 (3089)
T ss_dssp SCBC-EEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSS
T ss_pred CCCC-CCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCc
Confidence 4443 499999999999999876654 45655655 99743
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=9.2e-30 Score=235.47 Aligned_cols=214 Identities=16% Similarity=0.136 Sum_probs=176.1
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCCh---hHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK---TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~---~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
++++|||||++|||++++++|+++|+ .|++++|+. +..+++.+++.+.+.++.++.||++|+++++++++++.+.
T Consensus 239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~- 317 (496)
T 3mje_A 239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED- 317 (496)
T ss_dssp CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT-
T ss_pred CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh-
Confidence 58999999999999999999999999 788899863 3467778888888899999999999999999999998776
Q ss_pred CCccEEEECCCCC-CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 88 GKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 88 ~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
+++|++|||||+. ...++.+.+.++|+++|++|+.+++++.+.+.+.+ .++||++||..+..+.+++
T Consensus 318 g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~------------~~~iV~~SS~a~~~g~~g~ 385 (496)
T 3mje_A 318 APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLD------------LDAFVLFSSGAAVWGSGGQ 385 (496)
T ss_dssp SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSC------------CSEEEEEEEHHHHTTCTTC
T ss_pred CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccC------------CCEEEEEeChHhcCCCCCc
Confidence 7999999999987 77888999999999999999999999998776542 4789999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
..|+++|++++.|++.+ . ..||++++|+||++.++.+.... .....+... .....+|++++..+.+++..
T Consensus 386 ~~YaAaKa~ldala~~~----~-~~Gi~v~sV~pG~w~~~gm~~~~---~~~~~l~~~--g~~~l~pe~~~~~l~~~l~~ 455 (496)
T 3mje_A 386 PGYAAANAYLDALAEHR----R-SLGLTASSVAWGTWGEVGMATDP---EVHDRLVRQ--GVLAMEPEHALGALDQMLEN 455 (496)
T ss_dssp HHHHHHHHHHHHHHHHH----H-HTTCCCEEEEECEESSSCC---------CHHHHHT--TEEEECHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH----H-hcCCeEEEEECCcccCCccccCh---HHHHHHHhc--CCCCCCHHHHHHHHHHHHcC
Confidence 99999999999988754 3 44899999999999776543321 111111111 11235899999999998865
Q ss_pred CC
Q 022386 247 AG 248 (298)
Q Consensus 247 ~~ 248 (298)
+.
T Consensus 456 ~~ 457 (496)
T 3mje_A 456 DD 457 (496)
T ss_dssp TC
T ss_pred CC
Confidence 43
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.8e-29 Score=244.89 Aligned_cols=220 Identities=19% Similarity=0.131 Sum_probs=178.4
Q ss_pred CCcEEEEecCCchhHHHHHHHHH-HcCCc-EEEEcCC---hhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 11 KGKVALLTGGGSGIGFEISLQLG-KHGAA-IAIMGRR---KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~-~~G~~-Vv~~~r~---~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
.+|+++||||++|||+++|++|+ ++|++ |++++|+ .+..+++.+++.+.+.++.++.||++|+++++++++++.+
T Consensus 529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~ 608 (795)
T 3slk_A 529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD 608 (795)
T ss_dssp TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 48999999999999999999999 79994 9999998 4567788888888899999999999999999999999987
Q ss_pred HhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC
Q 022386 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~ 165 (298)
.+ +||++|||||+....++.+.+.++|+..|++|+.|++++++++.|.| +||++||..+..+.++
T Consensus 609 ~~-~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l--------------~iV~~SS~ag~~g~~g 673 (795)
T 3slk_A 609 EH-PLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV--------------ALVLFSSVSGVLGSGG 673 (795)
T ss_dssp TS-CEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS--------------EEEEEEETHHHHTCSS
T ss_pred hC-CCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC--------------EEEEEccHHhcCCCCC
Confidence 76 99999999999888889999999999999999999999999997766 2999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcC
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s 245 (298)
+..|+++|+ |++++++++. ++||++|+|+||++.|+.+..... +.....+ ...... ..++++....+...+.
T Consensus 674 ~~~YaAaka----~~~alA~~~~-~~Gi~v~sI~pG~v~t~g~~~~~~-~~~~~~~-~~~g~~-~l~~~e~~~~~~~~l~ 745 (795)
T 3slk_A 674 QGNYAAANS----FLDALAQQRQ-SRGLPTRSLAWGPWAEHGMASTLR-EAEQDRL-ARSGLL-PISTEEGLSQFDAACG 745 (795)
T ss_dssp CHHHHHHHH----HHHHHHHHHH-HTTCCEEEEEECCCSCCCHHHHHH-HHHHHHH-HHTTBC-CCCHHHHHHHHHHHHT
T ss_pred CHHHHHHHH----HHHHHHHHHH-HcCCeEEEEECCeECcchhhcccc-HHHHHHH-HhcCCC-CCCHHHHHHHHHHHHh
Confidence 999999996 5555666666 669999999999998775433221 1222222 222333 3466677666666555
Q ss_pred CCCCCccc
Q 022386 246 DAGKYVNG 253 (298)
Q Consensus 246 ~~~~~~~G 253 (298)
.+...+..
T Consensus 746 ~~~~~~~~ 753 (795)
T 3slk_A 746 GAHTVVAP 753 (795)
T ss_dssp SSCSSCCC
T ss_pred CCCcEEEE
Confidence 44333333
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.6e-27 Score=219.60 Aligned_cols=213 Identities=15% Similarity=0.084 Sum_probs=172.5
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCc-EEEEcCChh---HHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKT---VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~-Vv~~~r~~~---~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.++++|||||++|||++++++|+++|+. |++++|+.. ..+++.+++...+.++.++.||++|.++++++++.+ ..
T Consensus 225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-~~ 303 (486)
T 2fr1_A 225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-GD 303 (486)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-CT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-Hh
Confidence 4789999999999999999999999995 999999864 456777778777888999999999999999999998 56
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
++++|++|||||......+.+.+.+++++++++|+.+++++++++.+. + .++||++||..+..+.++.
T Consensus 304 ~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~----~--------~~~~V~~SS~a~~~g~~g~ 371 (486)
T 2fr1_A 304 DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL----D--------LTAFVLFSSFASAFGAPGL 371 (486)
T ss_dssp TSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS----C--------CSEEEEEEEHHHHTCCTTC
T ss_pred cCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC----C--------CCEEEEEcChHhcCCCCCC
Confidence 789999999999887778888899999999999999999999987532 2 5789999999999898999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
..|+++|++++.|++.+ . ..|+++++|+||++.++.+.... ....+.. ......+++++++.+..++..
T Consensus 372 ~~Yaaaka~l~~la~~~----~-~~gi~v~~i~pG~~~~~gm~~~~----~~~~~~~--~g~~~i~~e~~a~~l~~~l~~ 440 (486)
T 2fr1_A 372 GGYAPGNAYLDGLAQQR----R-SDGLPATAVAWGTWAGSGMAEGP----VADRFRR--HGVIEMPPETACRALQNALDR 440 (486)
T ss_dssp TTTHHHHHHHHHHHHHH----H-HTTCCCEEEEECCBC----------------CTT--TTEECBCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHH----H-hcCCeEEEEECCeeCCCcccchh----HHHHHHh--cCCCCCCHHHHHHHHHHHHhC
Confidence 99999999999987654 3 34899999999999875332211 1111111 112357999999999998865
Q ss_pred C
Q 022386 247 A 247 (298)
Q Consensus 247 ~ 247 (298)
.
T Consensus 441 ~ 441 (486)
T 2fr1_A 441 A 441 (486)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.6e-27 Score=197.82 Aligned_cols=208 Identities=19% Similarity=0.172 Sum_probs=157.4
Q ss_pred CCCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCe-EEEEccCCCHHHHHHHHHH
Q 022386 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA-IGLEGDVRKREDAVRVVES 82 (298)
Q Consensus 4 ~~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~-~~~~~Dls~~~~~~~~~~~ 82 (298)
+.....|+||+++||||+|+||++++++|+++|++|++++|+.+..+++.. ..+ .++.+|++ +.
T Consensus 13 ~~~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~------~~~~~~~~~Dl~---------~~ 77 (236)
T 3e8x_A 13 GRENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE------RGASDIVVANLE---------ED 77 (236)
T ss_dssp --------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH------TTCSEEEECCTT---------SC
T ss_pred cccccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh------CCCceEEEcccH---------HH
Confidence 356678999999999999999999999999999999999999876655432 247 88999999 33
Q ss_pred HHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC
Q 022386 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (298)
Q Consensus 83 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~ 162 (298)
+.+.++++|++|||||.... +++++.+++|+.++.++++++... + .++||++||..+..+
T Consensus 78 ~~~~~~~~D~vi~~ag~~~~--------~~~~~~~~~n~~~~~~l~~a~~~~----~--------~~~iv~~SS~~~~~~ 137 (236)
T 3e8x_A 78 FSHAFASIDAVVFAAGSGPH--------TGADKTILIDLWGAIKTIQEAEKR----G--------IKRFIMVSSVGTVDP 137 (236)
T ss_dssp CGGGGTTCSEEEECCCCCTT--------SCHHHHHHTTTHHHHHHHHHHHHH----T--------CCEEEEECCTTCSCG
T ss_pred HHHHHcCCCEEEECCCCCCC--------CCccccchhhHHHHHHHHHHHHHc----C--------CCEEEEEecCCCCCC
Confidence 44556799999999996432 357889999999999999988432 2 478999999777655
Q ss_pred C---CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHH
Q 022386 163 T---WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239 (298)
Q Consensus 163 ~---~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (298)
. +....|+.+|.+++.+++ + .||+++.|.||++.++......... ........+.+++|+|++
T Consensus 138 ~~~~~~~~~Y~~sK~~~e~~~~----~----~gi~~~~lrpg~v~~~~~~~~~~~~------~~~~~~~~~i~~~Dva~~ 203 (236)
T 3e8x_A 138 DQGPMNMRHYLVAKRLADDELK----R----SSLDYTIVRPGPLSNEESTGKVTVS------PHFSEITRSITRHDVAKV 203 (236)
T ss_dssp GGSCGGGHHHHHHHHHHHHHHH----H----SSSEEEEEEECSEECSCCCSEEEEE------SSCSCCCCCEEHHHHHHH
T ss_pred CCChhhhhhHHHHHHHHHHHHH----H----CCCCEEEEeCCcccCCCCCCeEEec------cCCCcccCcEeHHHHHHH
Confidence 4 467899999999999876 2 3799999999999987543321100 011123567899999999
Q ss_pred HHHhcCCCCCCccccEEEeCCCC
Q 022386 240 ALYLASDAGKYVNGNTLIVDGGN 262 (298)
Q Consensus 240 ~~~L~s~~~~~~~G~~i~~dgG~ 262 (298)
+.+++..+. .+|+.+++++|.
T Consensus 204 ~~~~~~~~~--~~g~~~~v~~~~ 224 (236)
T 3e8x_A 204 IAELVDQQH--TIGKTFEVLNGD 224 (236)
T ss_dssp HHHHTTCGG--GTTEEEEEEECS
T ss_pred HHHHhcCcc--ccCCeEEEeCCC
Confidence 999997643 789999998873
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.2e-26 Score=197.87 Aligned_cols=183 Identities=11% Similarity=0.072 Sum_probs=148.5
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
|++|+++||||+||||+++++.|+++|++|++++|+..... +.++.++.+|++|.++++++++ +
T Consensus 1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~-------~ 64 (267)
T 3rft_A 1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---------GPNEECVQCDLADANAVNAMVA-------G 64 (267)
T ss_dssp CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---------CTTEEEEECCTTCHHHHHHHHT-------T
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---------CCCCEEEEcCCCCHHHHHHHHc-------C
Confidence 35789999999999999999999999999999999864322 4578999999999999998886 7
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc---------
Q 022386 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY--------- 160 (298)
Q Consensus 90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~--------- 160 (298)
+|++|||||.. +.+.|++.+++|+.+++++++++.+ .+ .++||++||..++
T Consensus 65 ~D~vi~~Ag~~--------~~~~~~~~~~~N~~g~~~l~~a~~~----~~--------~~~iv~~SS~~~~g~~~~~~~~ 124 (267)
T 3rft_A 65 CDGIVHLGGIS--------VEKPFEQILQGNIIGLYNLYEAARA----HG--------QPRIVFASSNHTIGYYPQTERL 124 (267)
T ss_dssp CSEEEECCSCC--------SCCCHHHHHHHHTHHHHHHHHHHHH----TT--------CCEEEEEEEGGGGTTSBTTSCB
T ss_pred CCEEEECCCCc--------CcCCHHHHHHHHHHHHHHHHHHHHH----cC--------CCEEEEEcchHHhCCCCCCCCC
Confidence 99999999973 2235788999999999999999943 22 4789999998776
Q ss_pred ---cCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHH
Q 022386 161 ---TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA 237 (298)
Q Consensus 161 ---~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva 237 (298)
.+.++...|+.||.+.+.+++.++.++ |++++.|.||.+.++..... .. ..+.+++|++
T Consensus 125 ~e~~~~~~~~~Y~~sK~~~e~~~~~~a~~~----g~~~~~vr~~~v~~~~~~~~----~~----------~~~~~~~d~a 186 (267)
T 3rft_A 125 GPDVPARPDGLYGVSKCFGENLARMYFDKF----GQETALVRIGSCTPEPNNYR----ML----------STWFSHDDFV 186 (267)
T ss_dssp CTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECBCSSSCCSTT----HH----------HHBCCHHHHH
T ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHHh----CCeEEEEEeecccCCCCCCC----ce----------eeEEcHHHHH
Confidence 233455789999999999999999886 58999999999976532211 11 1256889999
Q ss_pred HHHHHhcCC
Q 022386 238 MAALYLASD 246 (298)
Q Consensus 238 ~~~~~L~s~ 246 (298)
+.+..++..
T Consensus 187 ~~~~~~~~~ 195 (267)
T 3rft_A 187 SLIEAVFRA 195 (267)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhC
Confidence 999888865
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.1e-26 Score=212.38 Aligned_cols=209 Identities=18% Similarity=0.145 Sum_probs=171.5
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChh---HHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKT---VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~---~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.++++|||||++|||++++++|+++|+ +|++++|+.. ..++..+++...+.++.++.||++|.++++++++.
T Consensus 258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~---- 333 (511)
T 2z5l_A 258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA---- 333 (511)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH----
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc----
Confidence 478999999999999999999999999 5899999863 45677778887788899999999999999999886
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
+++|++|||||+.....+.+.+.++++.++++|+.+++++.+++.+.. + .++||++||..+..+.++.
T Consensus 334 -~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~---~--------~~~~V~~SS~a~~~g~~g~ 401 (511)
T 2z5l_A 334 -YPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIK---G--------LDAFVLFSSVTGTWGNAGQ 401 (511)
T ss_dssp -SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCT---T--------CCCEEEEEEGGGTTCCTTB
T ss_pred -CCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhcc---C--------CCEEEEEeCHHhcCCCCCC
Confidence 789999999998877788888999999999999999999998764321 1 4679999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcc-cCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcC
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI-KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s 245 (298)
..|+++|++++.|++.+ . ..|+++++|+||++ .+.+... . .. ..+.. ......+++++++.+..++.
T Consensus 402 ~~YaaaKa~ld~la~~~----~-~~gi~v~sv~pG~~~~tgm~~~-~-~~---~~~~~--~g~~~l~~e~~a~~l~~al~ 469 (511)
T 2z5l_A 402 GAYAAANAALDALAERR----R-AAGLPATSVAWGLWGGGGMAAG-A-GE---ESLSR--RGLRAMDPDAAVDALLGAMG 469 (511)
T ss_dssp HHHHHHHHHHHHHHHHH----H-TTTCCCEEEEECCBCSTTCCCC-H-HH---HHHHH--HTBCCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH----H-HcCCcEEEEECCcccCCccccc-c-cH---HHHHh--cCCCCCCHHHHHHHHHHHHh
Confidence 99999999999999865 3 45899999999999 4443322 1 11 11111 12246799999999999886
Q ss_pred CC
Q 022386 246 DA 247 (298)
Q Consensus 246 ~~ 247 (298)
..
T Consensus 470 ~~ 471 (511)
T 2z5l_A 470 RN 471 (511)
T ss_dssp HT
T ss_pred CC
Confidence 43
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=5.3e-25 Score=195.38 Aligned_cols=245 Identities=16% Similarity=0.079 Sum_probs=176.1
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC-CCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
.++++|||||+|+||++++++|+++|++|++++|+.+...+..+.+... +.++.++.+|++|.++++++++. ++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~ 78 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA-----HP 78 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH-----SC
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc-----cC
Confidence 5689999999999999999999999999999999876555555555432 55788999999999999999875 58
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC-------
Q 022386 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA------- 162 (298)
Q Consensus 90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~------- 162 (298)
+|++|||||..... ...+...+.+++|+.++.++++++. +.+ .++||++||...+..
T Consensus 79 ~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~--------~~~iv~~SS~~~~g~~~~~~~~ 142 (341)
T 3enk_A 79 ITAAIHFAALKAVG----ESVAKPIEYYRNNLDSLLSLLRVMR----ERA--------VKRIVFSSSATVYGVPERSPID 142 (341)
T ss_dssp CCEEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHH----HTT--------CCEEEEEEEGGGBCSCSSSSBC
T ss_pred CcEEEECccccccC----ccccChHHHHHHHHHHHHHHHHHHH----hCC--------CCEEEEEecceEecCCCCCCCC
Confidence 99999999964321 1224456788999999998877653 333 468999999766522
Q ss_pred ----CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC----------hHHHHHHHhhh----
Q 022386 163 ----TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA----------PEEIRSKATDY---- 224 (298)
Q Consensus 163 ----~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~----------~~~~~~~~~~~---- 224 (298)
..+...|+.||.+.+.+++.++.++. +++++.+.|+.+..+.....+. -+.+.......
T Consensus 143 e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~---~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (341)
T 3enk_A 143 ETFPLSATNPYGQTKLMAEQILRDVEAADP---SWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKL 219 (341)
T ss_dssp TTSCCBCSSHHHHHHHHHHHHHHHHHHHCT---TCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCE
T ss_pred CCCCCCCCChhHHHHHHHHHHHHHHhhcCC---CceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCce
Confidence 12346899999999999999999864 6999999999998763211100 01111111111
Q ss_pred ------------ccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhhh
Q 022386 225 ------------MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVER 284 (298)
Q Consensus 225 ------------~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~~ 284 (298)
.....+...+|+|+++++++........|+.+++.+|..++ ...+.+.+.+.+..
T Consensus 220 ~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s-----~~e~~~~i~~~~g~ 286 (341)
T 3enk_A 220 RVFGSDYPTPDGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYS-----VLEVVRAFEKASGR 286 (341)
T ss_dssp EEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEE-----HHHHHHHHHHHHCS
T ss_pred EEeCCccCCCCCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCcee-----HHHHHHHHHHHhCC
Confidence 11123567899999999988642223568999999987765 35555555555443
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.7e-24 Score=179.53 Aligned_cols=193 Identities=10% Similarity=0.046 Sum_probs=146.4
Q ss_pred cEEEEecCCchhHHHHHHHHH-HcCCcEEEEcCChh-HHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 13 KVALLTGGGSGIGFEISLQLG-KHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~-~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
|+++||||+|+||+++++.|+ ++|++|++++|+.+ .++++. ..+.++.++.+|++|+++++++++ ++
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~~-------~~ 74 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----IDHERVTVIEGSFQNPGXLEQAVT-------NA 74 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HTSTTEEEEECCTTCHHHHHHHHT-------TC
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cCCCceEEEECCCCCHHHHHHHHc-------CC
Confidence 789999999999999999999 89999999999976 444332 345679999999999999988875 78
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch---
Q 022386 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI--- 167 (298)
Q Consensus 91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~--- 167 (298)
|++|||+|.. |+. ++.+++.|++.+ .++||++||...+.+.+...
T Consensus 75 d~vv~~ag~~-------------------n~~-----~~~~~~~~~~~~--------~~~iv~iSs~~~~~~~~~~~~~~ 122 (221)
T 3r6d_A 75 EVVFVGAMES-------------------GSD-----MASIVKALSRXN--------IRRVIGVSMAGLSGEFPVALEKW 122 (221)
T ss_dssp SEEEESCCCC-------------------HHH-----HHHHHHHHHHTT--------CCEEEEEEETTTTSCSCHHHHHH
T ss_pred CEEEEcCCCC-------------------Chh-----HHHHHHHHHhcC--------CCeEEEEeeceecCCCCcccccc
Confidence 9999999842 332 788888888765 57899999998877655443
Q ss_pred -------hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHH
Q 022386 168 -------HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240 (298)
Q Consensus 168 -------~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 240 (298)
.|+.+|.+++.+++. .||+++.|+||++.++......... .......+.+.+++|+|+++
T Consensus 123 ~~~~~~~~y~~~K~~~e~~~~~--------~~i~~~~vrpg~v~~~~~~~~~~~~-----~~~~~~~~~~~~~~dvA~~~ 189 (221)
T 3r6d_A 123 TFDNLPISYVQGERQARNVLRE--------SNLNYTILRLTWLYNDPEXTDYELI-----PEGAQFNDAQVSREAVVKAI 189 (221)
T ss_dssp HHHTSCHHHHHHHHHHHHHHHH--------SCSEEEEEEECEEECCTTCCCCEEE-----CTTSCCCCCEEEHHHHHHHH
T ss_pred cccccccHHHHHHHHHHHHHHh--------CCCCEEEEechhhcCCCCCcceeec-----cCCccCCCceeeHHHHHHHH
Confidence 899999999887752 3799999999999876332221100 00111223367899999999
Q ss_pred HHhc--CCCCCCccccEEEeCCC
Q 022386 241 LYLA--SDAGKYVNGNTLIVDGG 261 (298)
Q Consensus 241 ~~L~--s~~~~~~~G~~i~~dgG 261 (298)
++++ ++++.++++.....+.+
T Consensus 190 ~~l~~~~~~~~~~~~~~~i~~~~ 212 (221)
T 3r6d_A 190 FDILHAADETPFHRTSIGVGEPG 212 (221)
T ss_dssp HHHHTCSCCGGGTTEEEEEECTT
T ss_pred HHHHHhcChhhhhcceeeecCCC
Confidence 9999 88777766554444333
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=3.9e-24 Score=190.03 Aligned_cols=240 Identities=16% Similarity=0.099 Sum_probs=174.4
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh-hHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
|++|||||+|+||++++++|+++|++|++++|+. .......+.+.. ..++.++.+|++|.++++++++.. ++|
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d 75 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKY-----MPD 75 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc-CCceEEEEcCCCCHHHHHHHHhcc-----CCC
Confidence 5899999999999999999999999999998853 223333444443 346889999999999999988752 799
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc----------
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT---------- 161 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~---------- 161 (298)
++||+|+.... +.+.++++..+++|+.++.++++++.+.+. .++||++||...+.
T Consensus 76 ~vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-----------~~~iv~~SS~~v~g~~~~~~~~e~ 140 (347)
T 1orr_A 76 SCFHLAGQVAM----TTSIDNPCMDFEINVGGTLNLLEAVRQYNS-----------NCNIIYSSTNKVYGDLEQYKYNET 140 (347)
T ss_dssp EEEECCCCCCH----HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT-----------TCEEEEEEEGGGGTTCTTSCEEEC
T ss_pred EEEECCcccCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-----------CceEEEeccHHHhCCCCcCCcccc
Confidence 99999995321 123456788999999999999999988653 25799999976542
Q ss_pred -----------------CCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC---hHHHHHHH
Q 022386 162 -----------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---PEEIRSKA 221 (298)
Q Consensus 162 -----------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~---~~~~~~~~ 221 (298)
+..+...|+.+|.+.+.+++.++.++ |++++.+.||.+.++....... -..+....
T Consensus 141 ~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~ 216 (347)
T 1orr_A 141 ETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF----GLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKA 216 (347)
T ss_dssp SSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCEECTTCCCBTTBCHHHHHHHHH
T ss_pred cccccccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh----CCcEEEEccCceeCcCCCCCCcCcHHHHHHHHH
Confidence 12245789999999999999998886 5999999999999875432211 11222222
Q ss_pred hhhc-----cC---------CCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCC--CCCCCCCchhHHHhhHHhhh
Q 022386 222 TDYM-----AA---------YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNW--LSNPRDLPKEAVNQLSRAVE 283 (298)
Q Consensus 222 ~~~~-----~~---------~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~--~~~~~~~~~~~~~~~~~~~~ 283 (298)
.... +. ..+.+++|+|+++++++.. ....+|+.+++++|.. ++ .+.+.+.+.+.+.
T Consensus 217 ~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~-~~~~~g~~~~v~~~~~~~~s-----~~e~~~~i~~~~g 288 (347)
T 1orr_A 217 VEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALAN-VSKIRGNAFNIGGTIVNSLS-----LLELFKLLEDYCN 288 (347)
T ss_dssp HHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHT-HHHHTTCEEEESSCGGGEEE-----HHHHHHHHHHHHT
T ss_pred HhCcccCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhc-cccCCCCEEEeCCCCCCCcc-----HHHHHHHHHHHhC
Confidence 1111 21 1266899999999999863 2356799999999853 33 3444455544443
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.93 E-value=7.2e-25 Score=192.92 Aligned_cols=231 Identities=15% Similarity=0.098 Sum_probs=171.1
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
...+++|||||+|+||+++++.|+++|++|++++|+... +. + ++.++.+|++|.++++++++. ++
T Consensus 10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l-----~~~~~~~Dl~d~~~~~~~~~~-----~~ 74 (321)
T 2pk3_A 10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P-----NVEMISLDIMDSQRVKKVISD-----IK 74 (321)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T-----TEEEEECCTTCHHHHHHHHHH-----HC
T ss_pred cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c-----eeeEEECCCCCHHHHHHHHHh-----cC
Confidence 346899999999999999999999999999999998653 11 1 588899999999999988875 37
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC------
Q 022386 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT------ 163 (298)
Q Consensus 90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~------ 163 (298)
+|++||+||..... .+.++++..+++|+.++.++++++ +.+. + .++||++||...+...
T Consensus 75 ~d~vih~A~~~~~~----~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~--~--------~~~iv~~SS~~v~g~~~~~~~~ 139 (321)
T 2pk3_A 75 PDYIFHLAAKSSVK----DSWLNKKGTFSTNVFGTLHVLDAV-RDSN--L--------DCRILTIGSSEEYGMILPEESP 139 (321)
T ss_dssp CSEEEECCSCCCHH----HHTTCHHHHHHHHHHHHHHHHHHH-HHHT--C--------CCEEEEEEEGGGTBSCCGGGCS
T ss_pred CCEEEEcCcccchh----hhhhcHHHHHHHHHHHHHHHHHHH-HHhC--C--------CCeEEEEccHHhcCCCCCCCCC
Confidence 99999999964311 112357889999999999999999 5552 1 4789999998655322
Q ss_pred -------CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhh---h---------
Q 022386 164 -------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD---Y--------- 224 (298)
Q Consensus 164 -------~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~---~--------- 224 (298)
.+...|+.+|.+.+.+++.++.+. |++++.+.||.+.++..........+...... .
T Consensus 140 ~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 215 (321)
T 2pk3_A 140 VSEENQLRPMSPYGVSKASVGMLARQYVKAY----GMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVG 215 (321)
T ss_dssp BCTTSCCBCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEES
T ss_pred CCCCCCCCCCCccHHHHHHHHHHHHHHHHHc----CCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeC
Confidence 346789999999999999998875 69999999999988754332111222222222 1
Q ss_pred --ccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhh
Q 022386 225 --MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAV 282 (298)
Q Consensus 225 --~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~ 282 (298)
.....+.+++|+|+++++++... .+|+.+++++|..++ ...+.+.+.+.+
T Consensus 216 ~~~~~~~~v~v~Dva~a~~~~~~~~---~~g~~~~i~~~~~~s-----~~e~~~~i~~~~ 267 (321)
T 2pk3_A 216 NLEAVRDFTDVRDIVQAYWLLSQYG---KTGDVYNVCSGIGTR-----IQDVLDLLLAMA 267 (321)
T ss_dssp CSSCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEESCSCEEE-----HHHHHHHHHHHS
T ss_pred CCCcEEeeEEHHHHHHHHHHHHhCC---CCCCeEEeCCCCCee-----HHHHHHHHHHHh
Confidence 11234678999999999999754 468999999987664 344444444443
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.8e-24 Score=191.36 Aligned_cols=235 Identities=18% Similarity=0.078 Sum_probs=165.5
Q ss_pred CCCCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHH
Q 022386 3 SPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES 82 (298)
Q Consensus 3 ~~~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~ 82 (298)
+++...++++|++|||||+|+||++++++|+++|++|++++|+.....+..+.+ .++.++.+|++|.+++++++++
T Consensus 11 ~~~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l----~~v~~~~~Dl~d~~~~~~~~~~ 86 (330)
T 2pzm_A 11 SSGLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV----AGLSVIEGSVTDAGLLERAFDS 86 (330)
T ss_dssp ---CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC----TTEEEEECCTTCHHHHHHHHHH
T ss_pred ccCCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc----CCceEEEeeCCCHHHHHHHHhh
Confidence 456778899999999999999999999999999999999999754322111111 4688899999999999998876
Q ss_pred HHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC
Q 022386 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (298)
Q Consensus 83 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~ 162 (298)
+ ++|++|||||..... +.++++ +++|+.++.++++++... + .++||++||...+..
T Consensus 87 ~-----~~D~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~~~----~--------~~~iV~~SS~~~~~~ 142 (330)
T 2pzm_A 87 F-----KPTHVVHSAAAYKDP-----DDWAED--AATNVQGSINVAKAASKA----G--------VKRLLNFQTALCYGR 142 (330)
T ss_dssp H-----CCSEEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHHHH----T--------CSEEEEEEEGGGGCS
T ss_pred c-----CCCEEEECCccCCCc-----cccChh--HHHHHHHHHHHHHHHHHc----C--------CCEEEEecCHHHhCC
Confidence 5 799999999965332 334555 999999999999998842 2 468999999877543
Q ss_pred C-----C------CchhhHHHHHHHHHHHHHHHHHhcCCCCeE-EEEEeCCcccCCcccCcCChHHHHHHHhhhcc----
Q 022386 163 T-----W------YQIHVSAAKAAVDSITRSLALEWGTDYAIR-VNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA---- 226 (298)
Q Consensus 163 ~-----~------~~~~Y~~sK~a~~~l~~~la~e~~~~~gir-v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~---- 226 (298)
. + +...|+.+|.+++.+++.+ ++. ...|| ++.+.||. .+.. ...+.........
T Consensus 143 ~~~~~~~~~E~~~~~~~Y~~sK~~~e~~~~~~--~~~-~~~iR~~~v~gp~~-~~~~------~~~~~~~~~~~~~~~~~ 212 (330)
T 2pzm_A 143 PATVPIPIDSPTAPFTSYGISKTAGEAFLMMS--DVP-VVSLRLANVTGPRL-AIGP------IPTFYKRLKAGQKCFCS 212 (330)
T ss_dssp CSSSSBCTTCCCCCCSHHHHHHHHHHHHHHTC--SSC-EEEEEECEEECTTC-CSSH------HHHHHHHHHTTCCCCEE
T ss_pred CccCCCCcCCCCCCCChHHHHHHHHHHHHHHc--CCC-EEEEeeeeeECcCC-CCCH------HHHHHHHHHcCCEEeCC
Confidence 3 2 5578999999999999876 332 22455 45555553 1111 1112221111100
Q ss_pred --CCCCCCHHHHHH-HHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhhh
Q 022386 227 --AYKFGEKWDIAM-AALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVER 284 (298)
Q Consensus 227 --~~~~~~~~dva~-~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~~ 284 (298)
...+.+++|+|+ ++.+++..+. |+.+++++|..++ ...+.+.+.+.+..
T Consensus 213 ~~~~~~i~~~Dva~~a~~~~~~~~~----g~~~~v~~~~~~s-----~~e~~~~i~~~~g~ 264 (330)
T 2pzm_A 213 DTVRDFLDMSDFLAIADLSLQEGRP----TGVFNVSTGEGHS-----IKEVFDVVLDYVGA 264 (330)
T ss_dssp SCEECEEEHHHHHHHHHHHTSTTCC----CEEEEESCSCCEE-----HHHHHHHHHHHHTC
T ss_pred CCEecceeHHHHHHHHHHHHhhcCC----CCEEEeCCCCCCC-----HHHHHHHHHHHhCC
Confidence 345789999999 9999997632 8999999987664 35555555555543
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.8e-24 Score=190.56 Aligned_cols=241 Identities=13% Similarity=0.034 Sum_probs=175.2
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC-CCCeEEE-EccCCCHHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGL-EGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~-~~Dls~~~~~~~~~~~~~~ 85 (298)
..+++|++|||||+|+||.+++++|+++|++|++++|+.+..+.+.+.+... +.++.++ .+|++|.++++++++
T Consensus 7 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---- 82 (342)
T 1y1p_A 7 VLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK---- 82 (342)
T ss_dssp SSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT----
T ss_pred cCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc----
Confidence 4578999999999999999999999999999999999987666665555432 3568888 899999988777654
Q ss_pred HhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc-CC-
Q 022386 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-AT- 163 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~-~~- 163 (298)
++|++||+|+..... +++++.+++|+.++.++++++.+. .+ .++||++||...+. +.
T Consensus 83 ---~~d~vih~A~~~~~~-------~~~~~~~~~n~~g~~~ll~~~~~~---~~--------~~~iv~~SS~~~~~~~~~ 141 (342)
T 1y1p_A 83 ---GAAGVAHIASVVSFS-------NKYDEVVTPAIGGTLNALRAAAAT---PS--------VKRFVLTSSTVSALIPKP 141 (342)
T ss_dssp ---TCSEEEECCCCCSCC-------SCHHHHHHHHHHHHHHHHHHHHTC---TT--------CCEEEEECCGGGTCCCCT
T ss_pred ---CCCEEEEeCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHhC---CC--------CcEEEEeccHHHhcCCCC
Confidence 799999999964321 235678999999999999988752 11 36899999986652 21
Q ss_pred -----------------------------CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC--
Q 022386 164 -----------------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-- 212 (298)
Q Consensus 164 -----------------------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~-- 212 (298)
.+...|+.||.+.+.+++.++.+++ . +++++.+.||.+.++......
T Consensus 142 ~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~-~-~~~~~~~rp~~v~g~~~~~~~~~ 219 (342)
T 1y1p_A 142 NVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK-P-HFTLNAVLPNYTIGTIFDPETQS 219 (342)
T ss_dssp TCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-C-SSEEEEEEESEEECCCSCTTTCC
T ss_pred CCCCcccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcC-C-CceEEEEcCCceECCCCCCCCCC
Confidence 1236799999999999999999985 4 899999999999887543321
Q ss_pred -ChHHHHHHHhhh--------ccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhh
Q 022386 213 -APEEIRSKATDY--------MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVE 283 (298)
Q Consensus 213 -~~~~~~~~~~~~--------~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~ 283 (298)
....+...+... ...+.+.+++|+|+++++++.. ...+|+.+..+|+. ++ ...+.+.+.+.+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~--~~~~g~~~~~~g~~-~s-----~~e~~~~i~~~~~ 291 (342)
T 1y1p_A 220 GSTSGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVL--PQIERRRVYGTAGT-FD-----WNTVLATFRKLYP 291 (342)
T ss_dssp CHHHHHHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHC--TTCCSCEEEECCEE-EC-----HHHHHHHHHHHCT
T ss_pred ccHHHHHHHHHcCCCccccccCCcCCEeEHHHHHHHHHHHHcC--cccCCceEEEeCCC-CC-----HHHHHHHHHHHCC
Confidence 112222222111 1334578999999999998864 33567766666542 22 3444555544443
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.2e-24 Score=191.06 Aligned_cols=237 Identities=15% Similarity=0.052 Sum_probs=170.0
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcC--CcEEEEcCChh--HHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKT--VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G--~~Vv~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
+++++|||||+|+||++++++|+++| ++|++++|+.. ..+.+ +.+. ...++.++.+|++|.+++++++
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~------ 73 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLE-DDPRYTFVKGDVADYELVKELV------ 73 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTT-TCTTEEEEECCTTCHHHHHHHH------
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhc-cCCceEEEEcCCCCHHHHHHHh------
Confidence 35689999999999999999999997 89999988641 11111 1111 1456889999999999988887
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc-----
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT----- 161 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~----- 161 (298)
+++|++||+||.... +.+.++++..+++|+.++.++++++.+. . . .++||++||...+.
T Consensus 74 -~~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~--~-~--------~~~iv~~SS~~vyg~~~~~ 137 (336)
T 2hun_A 74 -RKVDGVVHLAAESHV----DRSISSPEIFLHSNVIGTYTLLESIRRE--N-P--------EVRFVHVSTDEVYGDILKG 137 (336)
T ss_dssp -HTCSEEEECCCCCCH----HHHHHCTHHHHHHHHHHHHHHHHHHHHH--C-T--------TSEEEEEEEGGGGCCCSSS
T ss_pred -hCCCEEEECCCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHh--C-C--------CcEEEEeccHHHHCCCCCC
Confidence 379999999996421 1233567789999999999999999876 1 1 36799999975432
Q ss_pred ------CCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhc---------c
Q 022386 162 ------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM---------A 226 (298)
Q Consensus 162 ------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~---------~ 226 (298)
+..+...|+.||.+.+.+++.++.++ |++++.+.||.+.++..........+........ .
T Consensus 138 ~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (336)
T 2hun_A 138 SFTENDRLMPSSPYSATKAASDMLVLGWTRTY----NLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKN 213 (336)
T ss_dssp CBCTTBCCCCCSHHHHHHHHHHHHHHHHHHHT----TCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---
T ss_pred CcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh----CCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCc
Confidence 22345689999999999999998875 5999999999998875432111122222222211 1
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhh
Q 022386 227 AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVE 283 (298)
Q Consensus 227 ~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~ 283 (298)
...+..++|+|+++++++... .+|+.+++++|..++ ...+.+.+.+.+.
T Consensus 214 ~~~~i~v~Dva~~~~~~~~~~---~~g~~~~v~~~~~~s-----~~e~~~~i~~~~g 262 (336)
T 2hun_A 214 VRDWLYVEDHVRAIELVLLKG---ESREIYNISAGEEKT-----NLEVVKIILRLMG 262 (336)
T ss_dssp CEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCSCEEC-----HHHHHHHHHHHTT
T ss_pred eeeeEEHHHHHHHHHHHHhCC---CCCCEEEeCCCCccc-----HHHHHHHHHHHhC
Confidence 234668999999999998643 379999999997664 3444444444443
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=6e-24 Score=189.24 Aligned_cols=220 Identities=16% Similarity=0.115 Sum_probs=169.6
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHc-CC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKH-GA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~-G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
...+++|++|||||+|+||++++++|+++ |+ +|++++|+..+.+.+.+.+. ..++.++.+|++|.++++++++
T Consensus 16 ~~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~--- 90 (344)
T 2gn4_A 16 QNMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN--DPRMRFFIGDVRDLERLNYALE--- 90 (344)
T ss_dssp CCTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC--CTTEEEEECCTTCHHHHHHHTT---
T ss_pred HHhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc--CCCEEEEECCCCCHHHHHHHHh---
Confidence 34688999999999999999999999999 98 99999999877766665553 3568999999999998887764
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~ 164 (298)
++|++||+||.... + .......+.+++|+.++.++++++.+.. .++||++||.....+
T Consensus 91 ----~~D~Vih~Aa~~~~-~---~~~~~~~~~~~~Nv~gt~~l~~aa~~~~------------v~~~V~~SS~~~~~p-- 148 (344)
T 2gn4_A 91 ----GVDICIHAAALKHV-P---IAEYNPLECIKTNIMGASNVINACLKNA------------ISQVIALSTDKAANP-- 148 (344)
T ss_dssp ----TCSEEEECCCCCCH-H---HHHHSHHHHHHHHHHHHHHHHHHHHHTT------------CSEEEEECCGGGSSC--
T ss_pred ----cCCEEEECCCCCCC-C---chhcCHHHHHHHHHHHHHHHHHHHHhCC------------CCEEEEecCCccCCC--
Confidence 79999999996421 0 1123356889999999999999998642 367999999766543
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhc---c------CCCCCCHHH
Q 022386 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM---A------AYKFGEKWD 235 (298)
Q Consensus 165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~---~------~~~~~~~~d 235 (298)
...|+.||.+++.+++.++.+++ +.|++++.+.||.+.++... .-+.+........ + .+.+.+++|
T Consensus 149 -~~~Y~~sK~~~E~~~~~~~~~~~-~~g~~~~~vRpg~v~g~~~~---~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D 223 (344)
T 2gn4_A 149 -INLYGATKLCSDKLFVSANNFKG-SSQTQFSVVRYGNVVGSRGS---VVPFFKKLVQNKASEIPITDIRMTRFWITLDE 223 (344)
T ss_dssp -CSHHHHHHHHHHHHHHHGGGCCC-SSCCEEEEECCCEETTCTTS---HHHHHHHHHHHTCCCEEESCTTCEEEEECHHH
T ss_pred -ccHHHHHHHHHHHHHHHHHHHhC-CCCcEEEEEEeccEECCCCC---HHHHHHHHHHcCCCceEEeCCCeEEeeEEHHH
Confidence 46899999999999999998886 67999999999999876421 1122222222211 1 123678999
Q ss_pred HHHHHHHhcCCCCCCccccEEEeCCC
Q 022386 236 IAMAALYLASDAGKYVNGNTLIVDGG 261 (298)
Q Consensus 236 va~~~~~L~s~~~~~~~G~~i~~dgG 261 (298)
+++++++++... ..|+.++++++
T Consensus 224 ~a~~v~~~l~~~---~~g~~~~~~~~ 246 (344)
T 2gn4_A 224 GVSFVLKSLKRM---HGGEIFVPKIP 246 (344)
T ss_dssp HHHHHHHHHHHC---CSSCEEEECCC
T ss_pred HHHHHHHHHhhc---cCCCEEecCCC
Confidence 999999998653 25788887665
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.8e-24 Score=191.33 Aligned_cols=244 Identities=19% Similarity=0.130 Sum_probs=173.0
Q ss_pred EEEEecCCchhHHHHHHHHHHc-CCcEEEEcCChh--HHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 14 VALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKT--VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~-G~~Vv~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
++|||||+|+||.+++++|+++ |++|++++|+.. ..+.+ ..+. .+.++.++.+|++|.+++++++++ .++
T Consensus 2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~ 74 (361)
T 1kew_A 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDIS-ESNRYNFEHADICDSAEITRIFEQ-----YQP 74 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTT-TCTTEEEEECCTTCHHHHHHHHHH-----HCC
T ss_pred EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhh-cCCCeEEEECCCCCHHHHHHHHhh-----cCC
Confidence 5999999999999999999998 799999998641 11111 1111 145688999999999999998875 279
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc---------
Q 022386 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT--------- 161 (298)
Q Consensus 91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~--------- 161 (298)
|++||+||.... +.+.+++++.+++|+.++.++++++.+.|..-+.. ...+++||++||...+.
T Consensus 75 d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~---~~~~~~iv~~SS~~v~g~~~~~~~~~ 147 (361)
T 1kew_A 75 DAVMHLAAESHV----DRSITGPAAFIETNIVGTYALLEVARKYWSALGED---KKNNFRFHHISTDEVYGDLPHPDEVE 147 (361)
T ss_dssp SEEEECCSCCCH----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHH---HHHHCEEEEEEEGGGGCCCCCGGGSC
T ss_pred CEEEECCCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccc---cccCceEEEeCCHHHhCCCccccccc
Confidence 999999996431 12345678899999999999999999987531000 00024899999965331
Q ss_pred ------------CCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhc----
Q 022386 162 ------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM---- 225 (298)
Q Consensus 162 ------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~---- 225 (298)
+..+...|+.||.+.+.+++.++.++ |++++.+.||.+.++..........+........
T Consensus 148 ~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~ 223 (361)
T 1kew_A 148 NSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY----GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPI 223 (361)
T ss_dssp TTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEE
T ss_pred ccccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh----CCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceE
Confidence 12345689999999999999999886 5999999999999876432111122222222211
Q ss_pred -----cCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhh
Q 022386 226 -----AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVE 283 (298)
Q Consensus 226 -----~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~ 283 (298)
....+.+++|+|+++++++... .+|+.+++++|..++ ...+.+.+.+.+.
T Consensus 224 ~~~~~~~~~~i~v~Dva~a~~~~~~~~---~~g~~~~v~~~~~~s-----~~e~~~~i~~~~g 278 (361)
T 1kew_A 224 YGKGDQIRDWLYVEDHARALHMVVTEG---KAGETYNIGGHNEKK-----NLDVVFTICDLLD 278 (361)
T ss_dssp ETTSCCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCCCEEE-----HHHHHHHHHHHHH
T ss_pred cCCCceeEeeEEHHHHHHHHHHHHhCC---CCCCEEEecCCCeee-----HHHHHHHHHHHhC
Confidence 1234668999999999999643 479999999997664 3444444444443
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2e-23 Score=186.19 Aligned_cols=241 Identities=15% Similarity=0.004 Sum_probs=176.5
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh----HHHHHHHHHHhC-CCCeEEEEccCCCHHHHHHHHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT----VLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~----~~~~~~~~~~~~-~~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
+++++++|||||+|+||+++++.|+++|++|++++|+.. .++.+.+.+... ..++.++.+|++|.++++++++
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-- 101 (352)
T 1sb8_A 24 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA-- 101 (352)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT--
T ss_pred CccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc--
Confidence 356789999999999999999999999999999999753 233333222111 2468899999999998888775
Q ss_pred HHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
++|++||+|+..... .+.++++..+++|+.++.++++++.+. + .++||++||...+.+.
T Consensus 102 -----~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~----~--------~~~~v~~SS~~~~~~~ 160 (352)
T 1sb8_A 102 -----GVDYVLHQAALGSVP----RSINDPITSNATNIDGFLNMLIAARDA----K--------VQSFTYAASSSTYGDH 160 (352)
T ss_dssp -----TCSEEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHHT----T--------CSEEEEEEEGGGGTTC
T ss_pred -----CCCEEEECCcccCch----hhhhCHHHHHHHHHHHHHHHHHHHHHc----C--------CCEEEEeccHHhcCCC
Confidence 799999999953211 133567889999999999999998753 2 4679999998765433
Q ss_pred C-----------CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC----ChHHHHHHHhhhcc--
Q 022386 164 W-----------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL----APEEIRSKATDYMA-- 226 (298)
Q Consensus 164 ~-----------~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~----~~~~~~~~~~~~~~-- 226 (298)
+ +...|+.+|.+.+.+++.++.++ |++++.+.||.+.++...... ....+........+
T Consensus 161 ~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (352)
T 1sb8_A 161 PGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCY----GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVY 236 (352)
T ss_dssp CCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCE
T ss_pred CCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc----CCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcE
Confidence 2 35689999999999999998886 599999999999887543221 11223333222221
Q ss_pred -------CCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhh
Q 022386 227 -------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAV 282 (298)
Q Consensus 227 -------~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~ 282 (298)
...+..++|+|+++++++... ....|+.+++.+|..++ .+.+.+.+.+.+
T Consensus 237 ~~g~g~~~~~~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~s-----~~e~~~~i~~~~ 293 (352)
T 1sb8_A 237 INGDGETSRDFCYIENTVQANLLAATAG-LDARNQVYNIAVGGRTS-----LNQLFFALRDGL 293 (352)
T ss_dssp EESSSCCEECCEEHHHHHHHHHHHHTCC-GGGCSEEEEESCSCCEE-----HHHHHHHHHHHH
T ss_pred EeCCCCceEeeEEHHHHHHHHHHHHhcc-ccCCCceEEeCCCCCcc-----HHHHHHHHHHHH
Confidence 124778999999999888642 24578999999887665 455555555555
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.92 E-value=7.9e-25 Score=185.09 Aligned_cols=197 Identities=15% Similarity=0.099 Sum_probs=148.5
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCC--cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
|++|+++||||+||||++++++|+++|+ +|++++|+.+..++.. ...+.++.+|++|+++++++++
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~------~~~~~~~~~D~~d~~~~~~~~~------ 83 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA------YKNVNQEVVDFEKLDDYASAFQ------ 83 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG------GGGCEEEECCGGGGGGGGGGGS------
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc------cCCceEEecCcCCHHHHHHHhc------
Confidence 6789999999999999999999999999 9999999865432211 1247889999999988877654
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
++|++|||||... ....++..+++|+.++..+++++. +.+ .++||++||..++.+ ...
T Consensus 84 -~~d~vi~~ag~~~-------~~~~~~~~~~~n~~~~~~~~~~~~----~~~--------~~~iv~~SS~~~~~~--~~~ 141 (242)
T 2bka_A 84 -GHDVGFCCLGTTR-------GKAGAEGFVRVDRDYVLKSAELAK----AGG--------CKHFNLLSSKGADKS--SNF 141 (242)
T ss_dssp -SCSEEEECCCCCH-------HHHHHHHHHHHHTHHHHHHHHHHH----HTT--------CCEEEEECCTTCCTT--CSS
T ss_pred -CCCEEEECCCccc-------ccCCcccceeeeHHHHHHHHHHHH----HCC--------CCEEEEEccCcCCCC--Ccc
Confidence 7999999999532 224578899999999998888754 332 478999999877643 345
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCe-EEEEEeCCcccCCcccCcCChHHHHHHHhhhcc----CCCCCCHHHHHHHHHH
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAI-RVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA----AYKFGEKWDIAMAALY 242 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~gi-rv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~dva~~~~~ 242 (298)
.|+.+|++++.+++.+ ++ +++.|.||++.++..... ..+..........+ ..++.+++|+|+++++
T Consensus 142 ~Y~~sK~~~e~~~~~~--------~~~~~~~vrpg~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 212 (242)
T 2bka_A 142 LYLQVKGEVEAKVEEL--------KFDRYSVFRPGVLLCDRQESR-PGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLN 212 (242)
T ss_dssp HHHHHHHHHHHHHHTT--------CCSEEEEEECCEEECTTGGGS-HHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhc--------CCCCeEEEcCceecCCCCCCc-HHHHHHHHhhcccCccccCCcccCHHHHHHHHHH
Confidence 7999999999988643 46 899999999998753221 11222222222233 4567899999999999
Q ss_pred hcCCCCC
Q 022386 243 LASDAGK 249 (298)
Q Consensus 243 L~s~~~~ 249 (298)
+++++..
T Consensus 213 ~~~~~~~ 219 (242)
T 2bka_A 213 NVVRPRD 219 (242)
T ss_dssp HHTSCCC
T ss_pred HHhCccc
Confidence 9987543
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.91 E-value=7.7e-24 Score=189.64 Aligned_cols=237 Identities=16% Similarity=0.084 Sum_probs=164.6
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHH--cCCcEEEEcCChhHHHHH-------HHHHHhCCCCeEEEEccCCCHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGK--HGAAIAIMGRRKTVLRSA-------VAALHSLGIPAIGLEGDVRKREDAV 77 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~--~G~~Vv~~~r~~~~~~~~-------~~~~~~~~~~~~~~~~Dls~~~~~~ 77 (298)
+++|++|++|||||+|+||++++++|++ +|++|++++|+....... .......+..+.++.+|++|.++++
T Consensus 5 ~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~ 84 (362)
T 3sxp_A 5 DDELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLR 84 (362)
T ss_dssp SCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHH
T ss_pred chhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHH
Confidence 3578899999999999999999999999 999999999975411100 0011112446789999999999888
Q ss_pred HHHHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccc
Q 022386 78 RVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 157 (298)
Q Consensus 78 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~ 157 (298)
++ ...++|++||+||.... +.++++..+++|+.++.++++++.. . +++||++||.
T Consensus 85 ~~------~~~~~D~vih~A~~~~~------~~~~~~~~~~~Nv~gt~~ll~aa~~----~---------~~~~V~~SS~ 139 (362)
T 3sxp_A 85 RL------EKLHFDYLFHQAAVSDT------TMLNQELVMKTNYQAFLNLLEIARS----K---------KAKVIYASSA 139 (362)
T ss_dssp HH------TTSCCSEEEECCCCCGG------GCCCHHHHHHHHTHHHHHHHHHHHH----T---------TCEEEEEEEG
T ss_pred Hh------hccCCCEEEECCccCCc------cccCHHHHHHHHHHHHHHHHHHHHH----c---------CCcEEEeCcH
Confidence 87 23589999999995322 2345678999999999999998842 2 2459999996
Q ss_pred ccccCC----------CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc----CChHHHHHHHhh
Q 022386 158 LHYTAT----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK----LAPEEIRSKATD 223 (298)
Q Consensus 158 ~~~~~~----------~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~----~~~~~~~~~~~~ 223 (298)
..+... .+...|+.+|.+.+.+++.++.+ +++..+.|+.+..+..... .....+......
T Consensus 140 ~vyg~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~------~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~ 213 (362)
T 3sxp_A 140 GVYGNTKAPNVVGKNESPENVYGFSKLCMDEFVLSHSND------NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMA 213 (362)
T ss_dssp GGGCSCCSSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT------SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHT
T ss_pred HHhCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhcc------CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHh
Confidence 544322 12346999999999999887444 6677788877776543221 111223333222
Q ss_pred hcc---------CCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhh
Q 022386 224 YMA---------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVE 283 (298)
Q Consensus 224 ~~~---------~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~ 283 (298)
..+ ...+..++|+|+++++++..+. +| .+++.+|..++ ...+.+.+.+.+.
T Consensus 214 ~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~~---~g-~~~i~~~~~~s-----~~e~~~~i~~~~g 273 (362)
T 3sxp_A 214 FKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQK---SG-VYNVGYSQARS-----YNEIVSILKEHLG 273 (362)
T ss_dssp TSEEECSGGGCCEEECEEHHHHHHHHHHHTTCSS---CE-EEEESCSCEEE-----HHHHHHHHHHHHC
T ss_pred CCCeEEECCCCeEEccEEHHHHHHHHHHHHhcCC---CC-EEEeCCCCCcc-----HHHHHHHHHHHcC
Confidence 221 2235679999999999997653 57 99999887664 3555555555544
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.91 E-value=4.9e-23 Score=183.15 Aligned_cols=244 Identities=15% Similarity=0.060 Sum_probs=167.3
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcC--CcEEEEcCChhHHHHHHHHHHhC--CCCeEEEEccCCCHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVV 80 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G--~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~ 80 (298)
+.+++++++++|||||+|+||.+++++|+++| +.|++++|.... .....+... ..++.++.+|++|.+++++++
T Consensus 17 n~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~ 94 (346)
T 4egb_A 17 NLYFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYS--GNLNNVKSIQDHPNYYFVKGEIQNGELLEHVI 94 (346)
T ss_dssp -------CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTT--CCGGGGTTTTTCTTEEEEECCTTCHHHHHHHH
T ss_pred ccccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccc--cchhhhhhhccCCCeEEEEcCCCCHHHHHHHH
Confidence 34456778999999999999999999999999 567777765311 001111111 246899999999999999998
Q ss_pred HHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc
Q 022386 81 ESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 160 (298)
Q Consensus 81 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~ 160 (298)
+.. ++|++||+|+..... ...++++..+++|+.++..+++++... + .+++|++||...+
T Consensus 95 ~~~-----~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~----~--------~~~~v~~SS~~vy 153 (346)
T 4egb_A 95 KER-----DVQVIVNFAAESHVD----RSIENPIPFYDTNVIGTVTLLELVKKY----P--------HIKLVQVSTDEVY 153 (346)
T ss_dssp HHH-----TCCEEEECCCCC-------------CHHHHHHTHHHHHHHHHHHHS----T--------TSEEEEEEEGGGG
T ss_pred hhc-----CCCEEEECCcccchh----hhhhCHHHHHHHHHHHHHHHHHHHHhc----C--------CCEEEEeCchHHh
Confidence 753 699999999965332 234567789999999999999988653 2 3679999997655
Q ss_pred cCCC------------CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccC-
Q 022386 161 TATW------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA- 227 (298)
Q Consensus 161 ~~~~------------~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~- 227 (298)
...+ +...|+.+|.+.+.+++.++.+. |++++.+.|+.+..+..........+........+.
T Consensus 154 ~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~ 229 (346)
T 4egb_A 154 GSLGKTGRFTEETPLAPNSPYSSSKASADMIALAYYKTY----QLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLP 229 (346)
T ss_dssp CCCCSSCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCE
T ss_pred CCCCcCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh----CCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCce
Confidence 3321 24689999999999999998885 599999999999876543222223333333332221
Q ss_pred --------CCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhh
Q 022386 228 --------YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVE 283 (298)
Q Consensus 228 --------~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~ 283 (298)
..+...+|+|+++.+++.... .|+.+++.+|..++ ...+.+.+.+.+.
T Consensus 230 ~~~~~~~~~~~i~v~Dva~a~~~~~~~~~---~g~~~~i~~~~~~s-----~~e~~~~i~~~~g 285 (346)
T 4egb_A 230 LYGDGLNVRDWLHVTDHCSAIDVVLHKGR---VGEVYNIGGNNEKT-----NVEVVEQIITLLG 285 (346)
T ss_dssp EETTSCCEECEEEHHHHHHHHHHHHHHCC---TTCEEEECCSCCEE-----HHHHHHHHHHHHT
T ss_pred eeCCCCeEEeeEEHHHHHHHHHHHHhcCC---CCCEEEECCCCcee-----HHHHHHHHHHHhC
Confidence 234568999999999997543 78999999997664 3455555555444
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=6.7e-23 Score=183.08 Aligned_cols=232 Identities=16% Similarity=0.109 Sum_probs=168.7
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
.|+++++|||||+|+||.+++++|+++|++|++++|+.+......+.+. .+.++.++.+|+++.+++.++++..
T Consensus 6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~----- 79 (357)
T 1rkx_A 6 FWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR-VADGMQSEIGDIRDQNKLLESIREF----- 79 (357)
T ss_dssp HHTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT-TTTTSEEEECCTTCHHHHHHHHHHH-----
T ss_pred hhCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc-cCCceEEEEccccCHHHHHHHHHhc-----
Confidence 4678999999999999999999999999999999998654443333332 2456889999999999999988765
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc-------
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT------- 161 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~------- 161 (298)
++|++||+||... ...+.++++..+++|+.++.++++++.+. .. .++||++||...+.
T Consensus 80 ~~d~vih~A~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~--------~~~~v~~SS~~vyg~~~~~~~ 144 (357)
T 1rkx_A 80 QPEIVFHMAAQPL----VRLSYSEPVETYSTNVMGTVYLLEAIRHV---GG--------VKAVVNITSDKCYDNKEWIWG 144 (357)
T ss_dssp CCSEEEECCSCCC----HHHHHHCHHHHHHHHTHHHHHHHHHHHHH---CC--------CCEEEEECCGGGBCCCCSSSC
T ss_pred CCCEEEECCCCcc----cccchhCHHHHHHHHHHHHHHHHHHHHHh---CC--------CCeEEEecCHHHhCCCCcCCC
Confidence 7999999999521 11234667889999999999999999763 11 36799999976432
Q ss_pred -----CCCCchhhHHHHHHHHHHHHHHHHHhcC-----CCCeEEEEEeCCcccCCcccCcC-ChHHHHHHHhhhc-----
Q 022386 162 -----ATWYQIHVSAAKAAVDSITRSLALEWGT-----DYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYM----- 225 (298)
Q Consensus 162 -----~~~~~~~Y~~sK~a~~~l~~~la~e~~~-----~~girv~~i~PG~v~t~~~~~~~-~~~~~~~~~~~~~----- 225 (298)
+..+...|+.+|.+.+.+++.++.++.. +.|++++.+.||.+.++...... .-..+........
T Consensus 145 ~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~ 224 (357)
T 1rkx_A 145 YRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIR 224 (357)
T ss_dssp BCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECS
T ss_pred CCCCCCCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEEC
Confidence 2234568999999999999999988720 12799999999999987532211 1122222222211
Q ss_pred ---cCCCCCCHHHHHHHHHHhcCCC--CCCccccEEEeCCC
Q 022386 226 ---AAYKFGEKWDIAMAALYLASDA--GKYVNGNTLIVDGG 261 (298)
Q Consensus 226 ---~~~~~~~~~dva~~~~~L~s~~--~~~~~G~~i~~dgG 261 (298)
....+...+|++++++.++... .....|+.+++.+|
T Consensus 225 ~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~ 265 (357)
T 1rkx_A 225 NPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPN 265 (357)
T ss_dssp CTTCEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCC
T ss_pred CCCCeeccEeHHHHHHHHHHHHHhhhhcCCCCCceEEECCC
Confidence 1124678899999998887531 11234778888764
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.1e-23 Score=185.09 Aligned_cols=223 Identities=12% Similarity=0.081 Sum_probs=159.7
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
++++||||+|+||.+++++|+++|++|++++|+....+. +.. .++.++.+|++|.++++++++ ++|+
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----l~~--~~~~~~~~Dl~d~~~~~~~~~-------~~d~ 80 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR----LAY--LEPECRVAEMLDHAGLERALR-------GLDG 80 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG----GGG--GCCEEEECCTTCHHHHHHHTT-------TCSE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh----hcc--CCeEEEEecCCCHHHHHHHHc-------CCCE
Confidence 589999999999999999999999999999998654322 111 257889999999998887765 6999
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC-------
Q 022386 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY------- 165 (298)
Q Consensus 93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~------- 165 (298)
+||+|+... ...+++++.+++|+.++.++++++.+. + .++||++||...+...+.
T Consensus 81 vih~a~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~--------~~~~v~~SS~~~~~~~~~~~~~~E~ 142 (342)
T 2x4g_A 81 VIFSAGYYP------SRPRRWQEEVASALGQTNPFYAACLQA----R--------VPRILYVGSAYAMPRHPQGLPGHEG 142 (342)
T ss_dssp EEEC------------------CHHHHHHHHHHHHHHHHHHH----T--------CSCEEEECCGGGSCCCTTSSCBCTT
T ss_pred EEECCccCc------CCCCCHHHHHHHHHHHHHHHHHHHHHc----C--------CCeEEEECCHHhhCcCCCCCCCCCC
Confidence 999999532 133567889999999999999999874 1 356999999877644333
Q ss_pred ---------chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcc-cCcCChHHHHHHHhhhcc------CCC
Q 022386 166 ---------QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG-VSKLAPEEIRSKATDYMA------AYK 229 (298)
Q Consensus 166 ---------~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~-~~~~~~~~~~~~~~~~~~------~~~ 229 (298)
...|+.+|.+.+.+++.++. . |++++.+.||.+.++.. ... ...+...+....+ ...
T Consensus 143 ~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~----~-g~~~~ilrp~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 215 (342)
T 2x4g_A 143 LFYDSLPSGKSSYVLCKWALDEQAREQAR----N-GLPVVIGIPGMVLGELDIGPT--TGRVITAIGNGEMTHYVAGQRN 215 (342)
T ss_dssp CCCSSCCTTSCHHHHHHHHHHHHHHHHHH----T-TCCEEEEEECEEECSCCSSCS--TTHHHHHHHTTCCCEEECCEEE
T ss_pred CCCCccccccChHHHHHHHHHHHHHHHhh----c-CCcEEEEeCCceECCCCcccc--HHHHHHHHHcCCCccccCCCcc
Confidence 66899999999999999875 2 69999999999988754 211 1223333322211 123
Q ss_pred CCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhh
Q 022386 230 FGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAV 282 (298)
Q Consensus 230 ~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~ 282 (298)
+.+++|+|+++.+++..+. .|+.+++.+|. ++ ...+.+.+.+.+
T Consensus 216 ~i~v~Dva~~~~~~~~~~~---~g~~~~v~~~~-~s-----~~e~~~~i~~~~ 259 (342)
T 2x4g_A 216 VIDAAEAGRGLLMALERGR---IGERYLLTGHN-LE-----MADLTRRIAELL 259 (342)
T ss_dssp EEEHHHHHHHHHHHHHHSC---TTCEEEECCEE-EE-----HHHHHHHHHHHH
T ss_pred eeeHHHHHHHHHHHHhCCC---CCceEEEcCCc-cc-----HHHHHHHHHHHh
Confidence 6689999999999997543 28899999997 54 344444444443
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.3e-23 Score=186.59 Aligned_cols=242 Identities=10% Similarity=-0.008 Sum_probs=170.8
Q ss_pred CCCCCCCCCCcEEEEecCCchhHHHHHHHHHHcC-CcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHH
Q 022386 3 SPFKGDILKGKVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVE 81 (298)
Q Consensus 3 ~~~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~ 81 (298)
+.|+...+++++++||||+|+||.+++++|+++| ++|++++|+.....+ .+. ...++.++.+|++|.++++++++
T Consensus 23 ~~~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~l~-~~~~v~~~~~Dl~d~~~l~~~~~ 98 (377)
T 2q1s_A 23 VIMNASKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI---NVP-DHPAVRFSETSITDDALLASLQD 98 (377)
T ss_dssp ---CCGGGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG---GSC-CCTTEEEECSCTTCHHHHHHCCS
T ss_pred CCCChHHhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh---hcc-CCCceEEEECCCCCHHHHHHHhh
Confidence 3455567889999999999999999999999999 999999997543211 111 13568899999999988877654
Q ss_pred HHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-CCCCCCCCCCcEEEEecccccc
Q 022386 82 STINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKG-GRGQASSSSGGIIINISATLHY 160 (298)
Q Consensus 82 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~~~~~~g~iv~vss~~~~ 160 (298)
++|++||+|+..... .+.+++++.+++|+.++.++++++.. . + .++||++||...+
T Consensus 99 -------~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~--------~~~~V~~SS~~vy 155 (377)
T 2q1s_A 99 -------EYDYVFHLATYHGNQ----SSIHDPLADHENNTLTTLKLYERLKH----FKR--------LKKVVYSAAGCSI 155 (377)
T ss_dssp -------CCSEEEECCCCSCHH----HHHHCHHHHHHHHTHHHHHHHHHHTT----CSS--------CCEEEEEEEC---
T ss_pred -------CCCEEEECCCccCch----hhhhCHHHHHHHHHHHHHHHHHHHHH----hCC--------CCeEEEeCCHHHc
Confidence 799999999853211 12356788999999999999988742 2 1 3679999997532
Q ss_pred c----------------CC-CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcc---------cC----
Q 022386 161 T----------------AT-WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG---------VS---- 210 (298)
Q Consensus 161 ~----------------~~-~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~---------~~---- 210 (298)
. +. .+...|+.+|.+.+.+++.++.+. |++++.+.||.+.++.. ..
T Consensus 156 g~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~ 231 (377)
T 2q1s_A 156 AEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH----QLPTVRARFQNVYGPGEILGAGRWRGTPATVW 231 (377)
T ss_dssp -----------CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECCEECTTCCTTCSSCCSSGGGTS
T ss_pred CCCCCCCcCcccccccccccCCCCchHHHHHHHHHHHHHHHHHh----CCCEEEEeeccEECCCCcccccccccCccccc
Confidence 1 11 345689999999999999998875 59999999999987754 11
Q ss_pred cCChHHHHHHHhhhccC---------CCCCCHHHHHHH-HHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHH
Q 022386 211 KLAPEEIRSKATDYMAA---------YKFGEKWDIAMA-ALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSR 280 (298)
Q Consensus 211 ~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~-~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~ 280 (298)
......+........+. ..+...+|+|++ +.+++..+. +| .+++.+|..++ .+.+.+.+.+
T Consensus 232 ~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~---~g-~~~i~~~~~~s-----~~e~~~~i~~ 302 (377)
T 2q1s_A 232 RNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDVANGLIACAADGTP---GG-VYNIASGKETS-----IADLATKINE 302 (377)
T ss_dssp CSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCCT---TE-EEECCCCCCEE-----HHHHHHHHHH
T ss_pred ccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcCC---CC-eEEecCCCcee-----HHHHHHHHHH
Confidence 11112233333322222 235568999999 999887543 68 99999886654 4555555555
Q ss_pred hhhh
Q 022386 281 AVER 284 (298)
Q Consensus 281 ~~~~ 284 (298)
.+..
T Consensus 303 ~~g~ 306 (377)
T 2q1s_A 303 ITGN 306 (377)
T ss_dssp HHTC
T ss_pred HhCC
Confidence 5543
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-23 Score=178.51 Aligned_cols=215 Identities=12% Similarity=0.006 Sum_probs=155.2
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHc--CCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKH--GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
+++|+++||||+|+||++++++|+++ |++|++++|+.+..+++ ..++.++.+|++|.++++++++
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~------ 68 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-------GGEADVFIGDITDADSINPAFQ------ 68 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-------TCCTTEEECCTTSHHHHHHHHT------
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-------CCCeeEEEecCCCHHHHHHHHc------
Confidence 45789999999999999999999999 89999999987554322 3457789999999999888875
Q ss_pred CCccEEEECCCCCCCCCC---------CCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccc
Q 022386 88 GKLDILVNAAAGNFLVPA---------EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~---------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~ 158 (298)
.+|++|||||....... .+...+.+.+.+++|+.++..+++++... + .++||++||..
T Consensus 69 -~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~--------~~~iv~~SS~~ 135 (253)
T 1xq6_A 69 -GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA----G--------VKHIVVVGSMG 135 (253)
T ss_dssp -TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH----T--------CSEEEEEEETT
T ss_pred -CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc----C--------CCEEEEEcCcc
Confidence 69999999996532110 11122444567899999999998887643 2 36799999987
Q ss_pred cccCCCCch-----hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCH
Q 022386 159 HYTATWYQI-----HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEK 233 (298)
Q Consensus 159 ~~~~~~~~~-----~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (298)
+..+..+.. .|+.+|.+++.+++. .|++++.+.||++.++................ .....+.++
T Consensus 136 ~~~~~~~~~~~~~~~y~~sK~~~e~~~~~--------~~i~~~~vrpg~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 205 (253)
T 1xq6_A 136 GTNPDHPLNKLGNGNILVWKRKAEQYLAD--------SGTPYTIIRAGGLLDKEGGVRELLVGKDDELL--QTDTKTVPR 205 (253)
T ss_dssp TTCTTCGGGGGGGCCHHHHHHHHHHHHHT--------SSSCEEEEEECEEECSCSSSSCEEEESTTGGG--GSSCCEEEH
T ss_pred CCCCCCccccccchhHHHHHHHHHHHHHh--------CCCceEEEecceeecCCcchhhhhccCCcCCc--CCCCcEEcH
Confidence 765443333 366699999887752 47999999999998764321100000000011 123457899
Q ss_pred HHHHHHHHHhcCCCCCCccccEEEeCCCC
Q 022386 234 WDIAMAALYLASDAGKYVNGNTLIVDGGN 262 (298)
Q Consensus 234 ~dva~~~~~L~s~~~~~~~G~~i~~dgG~ 262 (298)
+|+|+++.+++..+. .+|+.++++++.
T Consensus 206 ~Dva~~~~~~~~~~~--~~g~~~~i~~~~ 232 (253)
T 1xq6_A 206 ADVAEVCIQALLFEE--AKNKAFDLGSKP 232 (253)
T ss_dssp HHHHHHHHHHTTCGG--GTTEEEEEEECC
T ss_pred HHHHHHHHHHHcCcc--ccCCEEEecCCC
Confidence 999999999997632 478999998864
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=99.91 E-value=3.4e-23 Score=182.44 Aligned_cols=255 Identities=16% Similarity=0.095 Sum_probs=179.7
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHH-HcCCcEEEEcCChh------------HHHHHHHHHHhCCCCeEEEEccCCCHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLG-KHGAAIAIMGRRKT------------VLRSAVAALHSLGIPAIGLEGDVRKRE 74 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~-~~G~~Vv~~~r~~~------------~~~~~~~~~~~~~~~~~~~~~Dls~~~ 74 (298)
..+.+|++|||||++|||++++..|+ ..|+.|+++.+..+ ....+.+.+.+.|.+...+.||+++.+
T Consensus 46 ~~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e 125 (401)
T 4ggo_A 46 GAKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDE 125 (401)
T ss_dssp TSCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHH
T ss_pred ccCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHH
Confidence 45678999999999999999999999 68999998877542 234566777888999999999999999
Q ss_pred HHHHHHHHHHHHhCCccEEEECCCCCCC-------------CCC---------------------CCCCHHHHHHHHH--
Q 022386 75 DAVRVVESTINHFGKLDILVNAAAGNFL-------------VPA---------------------EDLSPNGFRTVIE-- 118 (298)
Q Consensus 75 ~~~~~~~~~~~~~~~id~li~~ag~~~~-------------~~~---------------------~~~~~~~~~~~~~-- 118 (298)
+++++++++.+.+|+||+||||++.... +++ ...+.++++.+..
T Consensus 126 ~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vM 205 (401)
T 4ggo_A 126 IKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVM 205 (401)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHH
Confidence 9999999999999999999999986421 111 1224455554444
Q ss_pred -hhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC--chhhHHHHHHHHHHHHHHHHHhcCCCCeEE
Q 022386 119 -IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY--QIHVSAAKAAVDSITRSLALEWGTDYAIRV 195 (298)
Q Consensus 119 -~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~--~~~Y~~sK~a~~~l~~~la~e~~~~~girv 195 (298)
....+.|...+...+.|.+ +++++.+|+..+....|. .+.++++|++++..++.|+.+++ ++++
T Consensus 206 g~s~~s~w~~al~~a~lla~----------G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~---~~~a 272 (401)
T 4ggo_A 206 GGEDWERWIKQLSKEGLLEE----------GCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENP---SIRA 272 (401)
T ss_dssp SSHHHHHHHHHHHHTTCEEE----------EEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCT---TEEE
T ss_pred hhhHHHHHHHHHHhhhcccC----------CceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcC---CCcE
Confidence 4555566666666666654 689999999887655443 35789999999999999999997 5999
Q ss_pred EEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCC-CchhH
Q 022386 196 NGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRD-LPKEA 274 (298)
Q Consensus 196 ~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~-~~~~~ 274 (298)
|.+.||.+.|.....-..-+-....+.+- ++..++-|.+.+.+..|..+. -|-++..+.+|....++..+| +.+.+
T Consensus 273 ~v~v~~a~vT~AssaIP~~ply~~~l~kv--mk~~g~heg~ieq~~rl~~~~-ly~~~~~~~~D~~~r~r~d~~el~~~v 349 (401)
T 4ggo_A 273 FVSVNKGLVTRASAVIPVIPLYLASLFKV--MKEKGNHEGCIEQITRLYAER-LYRKDGTIPVDEENRIRIDDWELEEDV 349 (401)
T ss_dssp EEEECCCCCCTTGGGSSSHHHHHHHHHHH--HHHHTCCCCHHHHHHHHHHHT-TSCTTCCCCCCTTSCEESCTTTTCHHH
T ss_pred EEEEcCccccchhhcCCCchHHHHHHHHH--HHhcCCCCchHHHHHHHHHHh-hccCCCCCCcCCCCCccCchhhcCHHH
Confidence 99999999886443322222222221111 111234456777777777542 222333455788777776665 45555
Q ss_pred HHhh
Q 022386 275 VNQL 278 (298)
Q Consensus 275 ~~~~ 278 (298)
..++
T Consensus 350 q~~v 353 (401)
T 4ggo_A 350 QKAV 353 (401)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4444
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.6e-23 Score=175.40 Aligned_cols=199 Identities=12% Similarity=0.044 Sum_probs=137.9
Q ss_pred CCCCCCCCCcEEEEecCCchhHHHHHHHHHHcC-CcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHH
Q 022386 4 PFKGDILKGKVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES 82 (298)
Q Consensus 4 ~~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~ 82 (298)
.+....+..|+++||||+|+||+++++.|+++| ++|++++|+.+.+++. ....+.++.+|++|+++++++++
T Consensus 15 ~~~~~~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~- 87 (236)
T 3qvo_A 15 ENLYFQGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP------YPTNSQIIMGDVLNHAALKQAMQ- 87 (236)
T ss_dssp -------CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS------CCTTEEEEECCTTCHHHHHHHHT-
T ss_pred cceeecCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc------ccCCcEEEEecCCCHHHHHHHhc-
Confidence 344445556899999999999999999999999 8999999997643321 23468899999999999988876
Q ss_pred HHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC
Q 022386 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (298)
Q Consensus 83 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~ 162 (298)
.+|++|||++.. .. ...++.+++.|++.+ .++||++||...+.+
T Consensus 88 ------~~D~vv~~a~~~--------~~--------------~~~~~~~~~~~~~~~--------~~~iV~iSS~~~~~~ 131 (236)
T 3qvo_A 88 ------GQDIVYANLTGE--------DL--------------DIQANSVIAAMKACD--------VKRLIFVLSLGIYDE 131 (236)
T ss_dssp ------TCSEEEEECCST--------TH--------------HHHHHHHHHHHHHTT--------CCEEEEECCCCC---
T ss_pred ------CCCEEEEcCCCC--------ch--------------hHHHHHHHHHHHHcC--------CCEEEEEecceecCC
Confidence 689999999841 11 133567888888765 578999999887655
Q ss_pred CCCc-------------hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhcc-CC
Q 022386 163 TWYQ-------------IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA-AY 228 (298)
Q Consensus 163 ~~~~-------------~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~~ 228 (298)
.+.. ..|..+|. .+. +.||+++.|.||++.++...... ......+ .+
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------~l~-~~gi~~~~vrPg~i~~~~~~~~~-------~~~~~~~~~~ 192 (236)
T 3qvo_A 132 VPGKFVEWNNAVIGEPLKPFRRAAD-----------AIE-ASGLEYTILRPAWLTDEDIIDYE-------LTSRNEPFKG 192 (236)
T ss_dssp -------------CGGGHHHHHHHH-----------HHH-TSCSEEEEEEECEEECCSCCCCE-------EECTTSCCSC
T ss_pred CCcccccchhhcccchHHHHHHHHH-----------HHH-HCCCCEEEEeCCcccCCCCcceE-------EeccCCCCCC
Confidence 4331 22333322 223 55899999999999876432210 0011112 35
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 229 KFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 229 ~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
++.+++|+|++++++++++..++ |+.+.++++.+..
T Consensus 193 ~~i~~~DvA~~i~~ll~~~~~~~-g~~~~i~~~~~~~ 228 (236)
T 3qvo_A 193 TIVSRKSVAALITDIIDKPEKHI-GENIGINQPGTDG 228 (236)
T ss_dssp SEEEHHHHHHHHHHHHHSTTTTT-TEEEEEECSSCCC
T ss_pred cEECHHHHHHHHHHHHcCccccc-CeeEEecCCCCCC
Confidence 67899999999999999876666 8899998887653
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.90 E-value=1e-23 Score=175.70 Aligned_cols=192 Identities=14% Similarity=0.134 Sum_probs=152.8
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCC-HHHHHHHHHHHHHHhCCccE
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK-REDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~-~~~~~~~~~~~~~~~~~id~ 92 (298)
+++||||+|+||+++++.|+++|++|++++|+.+..+.. .++.++.+|++| .++++++++ ++|+
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~~~~~D~~d~~~~~~~~~~-------~~d~ 66 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--------NNVKAVHFDVDWTPEEMAKQLH-------GMDA 66 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--------TTEEEEECCTTSCHHHHHTTTT-------TCSE
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--------CCceEEEecccCCHHHHHHHHc-------CCCE
Confidence 699999999999999999999999999999997643321 568999999999 888887764 7999
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC-------
Q 022386 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY------- 165 (298)
Q Consensus 93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~------- 165 (298)
+|||||.... ..+++|+.++..+++++. +.+ .++||++||..+..+.+.
T Consensus 67 vi~~ag~~~~------------~~~~~n~~~~~~l~~a~~----~~~--------~~~iv~~SS~~~~~~~~~~e~~~~~ 122 (219)
T 3dqp_A 67 IINVSGSGGK------------SLLKVDLYGAVKLMQAAE----KAE--------VKRFILLSTIFSLQPEKWIGAGFDA 122 (219)
T ss_dssp EEECCCCTTS------------SCCCCCCHHHHHHHHHHH----HTT--------CCEEEEECCTTTTCGGGCCSHHHHH
T ss_pred EEECCcCCCC------------CcEeEeHHHHHHHHHHHH----HhC--------CCEEEEECcccccCCCccccccccc
Confidence 9999996541 167789999999888874 322 468999999887766555
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcC
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s 245 (298)
...|+.+|.+.+.+++ + ..|++++.+.||++.++........ ......+.+++|+|+++++++.
T Consensus 123 ~~~Y~~sK~~~e~~~~----~---~~~i~~~ilrp~~v~g~~~~~~~~~---------~~~~~~~i~~~Dva~~i~~~l~ 186 (219)
T 3dqp_A 123 LKDYYIAKHFADLYLT----K---ETNLDYTIIQPGALTEEEATGLIDI---------NDEVSASNTIGDVADTIKELVM 186 (219)
T ss_dssp THHHHHHHHHHHHHHH----H---SCCCEEEEEEECSEECSCCCSEEEE---------SSSCCCCEEHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHH----h---ccCCcEEEEeCceEecCCCCCcccc---------CCCcCCcccHHHHHHHHHHHHh
Confidence 6789999999999887 2 4589999999999987643332211 1344568899999999999997
Q ss_pred CCCCCccccEEEeCCCC
Q 022386 246 DAGKYVNGNTLIVDGGN 262 (298)
Q Consensus 246 ~~~~~~~G~~i~~dgG~ 262 (298)
.+. ..|+.+++++|.
T Consensus 187 ~~~--~~g~~~~i~~g~ 201 (219)
T 3dqp_A 187 TDH--SIGKVISMHNGK 201 (219)
T ss_dssp CGG--GTTEEEEEEECS
T ss_pred Ccc--ccCcEEEeCCCC
Confidence 643 458999997774
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-22 Score=180.52 Aligned_cols=240 Identities=18% Similarity=0.121 Sum_probs=165.0
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC--CCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
|++|++|||||+|+||.+++++|+++|++|++++|+.+.... ..+... ..++.++.+|++|.++++++++.+
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 74 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELGIENDVKIIHMDLLEFSNIIRTIEKV---- 74 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH----
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhccccCceeEEECCCCCHHHHHHHHHhc----
Confidence 468999999999999999999999999999999998654321 122222 246889999999999999998765
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc-------
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY------- 160 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~------- 160 (298)
++|++||+||.... +.+.++++..+++|+.++.++++++.. +.. .++||++||...+
T Consensus 75 -~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~-~~~----------~~~iv~~SS~~vyg~~~~~~ 138 (345)
T 2z1m_A 75 -QPDEVYNLAAQSFV----GVSFEQPILTAEVDAIGVLRILEALRT-VKP----------DTKFYQASTSEMFGKVQEIP 138 (345)
T ss_dssp -CCSEEEECCCCCCH----HHHTTSHHHHHHHHTHHHHHHHHHHHH-HCT----------TCEEEEEEEGGGGCSCSSSS
T ss_pred -CCCEEEECCCCcch----hhhhhCHHHHHHHHHHHHHHHHHHHHH-hCC----------CceEEEEechhhcCCCCCCC
Confidence 79999999996421 112345788999999999999999985 211 2679999998543
Q ss_pred ----cCCCCchhhHHHHHHHHHHHHHHHHHhcC--CCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhh----------
Q 022386 161 ----TATWYQIHVSAAKAAVDSITRSLALEWGT--DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY---------- 224 (298)
Q Consensus 161 ----~~~~~~~~Y~~sK~a~~~l~~~la~e~~~--~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~---------- 224 (298)
.+..+...|+.||.+.+.+++.++.+++. ..++.++.+.||...+..... . ..........
T Consensus 139 ~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~ 215 (345)
T 2z1m_A 139 QTEKTPFYPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRK--I-TYSLARIKYGLQDKLVLGNL 215 (345)
T ss_dssp BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHH--H-HHHHHHHHTTSCSCEEESCT
T ss_pred CCccCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHH--H-HHHHHHHHcCCCCeeeeCCC
Confidence 22334578999999999999999988641 113456667777665432100 0 1111111111
Q ss_pred ccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhh
Q 022386 225 MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVE 283 (298)
Q Consensus 225 ~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~ 283 (298)
...+.+.+++|+|+++.+++..+. ++.+++.+|..++ ...+.+.+.+.+.
T Consensus 216 ~~~~~~~~v~Dva~a~~~~~~~~~----~~~~~i~~~~~~s-----~~e~~~~i~~~~g 265 (345)
T 2z1m_A 216 NAKRDWGYAPEYVEAMWLMMQQPE----PDDYVIATGETHT-----VREFVEKAAKIAG 265 (345)
T ss_dssp TCEECCEEHHHHHHHHHHHHTSSS----CCCEEECCSCCEE-----HHHHHHHHHHHTT
T ss_pred CceeeeEEHHHHHHHHHHHHhCCC----CceEEEeCCCCcc-----HHHHHHHHHHHhC
Confidence 011237899999999999997543 3578887776554 3444444444443
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=3.1e-22 Score=181.51 Aligned_cols=244 Identities=13% Similarity=0.073 Sum_probs=167.8
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHH-----------------HHHHHHHhCCCCeEEEEccCC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLR-----------------SAVAALHSLGIPAIGLEGDVR 71 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~-----------------~~~~~~~~~~~~~~~~~~Dls 71 (298)
..+++++|||||+|.||.+++++|+++|++|++++|+..... .........+.++.++.+|++
T Consensus 8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~ 87 (404)
T 1i24_A 8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDIC 87 (404)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTT
T ss_pred ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCC
Confidence 356889999999999999999999999999999998754321 111111122456889999999
Q ss_pred CHHHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEE
Q 022386 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGII 151 (298)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~i 151 (298)
|.++++++++.. ++|++||+||....... ..+++.+...+++|+.++.++++++.+... ..+|
T Consensus 88 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~~-~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-----------~~~~ 150 (404)
T 1i24_A 88 DFEFLAESFKSF-----EPDSVVHFGEQRSAPYS-MIDRSRAVYTQHNNVIGTLNVLFAIKEFGE-----------ECHL 150 (404)
T ss_dssp SHHHHHHHHHHH-----CCSEEEECCSCCCHHHH-TSCHHHHHHHHHHHHHHHHHHHHHHHHHCT-----------TCEE
T ss_pred CHHHHHHHHhcc-----CCCEEEECCCCCCccch-hhCccchhhhHHHHHHHHHHHHHHHHHhCC-----------CcEE
Confidence 999999888754 69999999996432111 225677788999999999999999875421 1479
Q ss_pred EEeccccccc------------------------CCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCc
Q 022386 152 INISATLHYT------------------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 207 (298)
Q Consensus 152 v~vss~~~~~------------------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~ 207 (298)
|++||...+. +..+...|+.||.+.+.+++.++.++ |++++.+.||.+.++.
T Consensus 151 V~~SS~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----gi~~~ivrp~~v~Gp~ 226 (404)
T 1i24_A 151 VKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW----GIRATDLNQGVVYGVK 226 (404)
T ss_dssp EEECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEECSC
T ss_pred EEeCcHHHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc----CCeEEEEecceeeCCC
Confidence 9999976442 22235689999999999999998876 5999999999998775
Q ss_pred ccCc-----------------CChHHHHHHHhhhcc---------CCCCCCHHHHHHHHHHhcCCCCCCccc--cEEEeC
Q 022386 208 GVSK-----------------LAPEEIRSKATDYMA---------AYKFGEKWDIAMAALYLASDAGKYVNG--NTLIVD 259 (298)
Q Consensus 208 ~~~~-----------------~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~L~s~~~~~~~G--~~i~~d 259 (298)
.... ..-..+........+ ...+...+|+|++++.++.... ..| +.+++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~--~~g~~~~yni~ 304 (404)
T 1i24_A 227 TDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPA--KAGEFRVFNQF 304 (404)
T ss_dssp CTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCC--CTTCEEEEEEC
T ss_pred CCccccccccccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcc--cCCCceEEEEC
Confidence 3210 011222222222211 1235679999999999886432 235 688885
Q ss_pred CCCCCCCCCCCchhHHHhhHHh
Q 022386 260 GGNWLSNPRDLPKEAVNQLSRA 281 (298)
Q Consensus 260 gG~~~~~~~~~~~~~~~~~~~~ 281 (298)
+ ..++ ...+.+.+.+.
T Consensus 305 ~-~~~s-----~~e~~~~i~~~ 320 (404)
T 1i24_A 305 T-EQFS-----VNELASLVTKA 320 (404)
T ss_dssp S-EEEE-----HHHHHHHHHHH
T ss_pred C-CCCc-----HHHHHHHHHHH
Confidence 5 3333 34444444443
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.90 E-value=8.2e-23 Score=180.94 Aligned_cols=231 Identities=16% Similarity=0.050 Sum_probs=160.2
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
...++++++|||||+|+||++++++|+++|++|++++|+.....+ .+... .++.++.+|++|.++++++++.
T Consensus 16 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~l~~~-~~~~~~~~Dl~d~~~~~~~~~~---- 87 (333)
T 2q1w_A 16 PRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRRE---HLKDH-PNLTFVEGSIADHALVNQLIGD---- 87 (333)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG---GSCCC-TTEEEEECCTTCHHHHHHHHHH----
T ss_pred eecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchh---hHhhc-CCceEEEEeCCCHHHHHHHHhc----
Confidence 345678999999999999999999999999999999997532111 11111 4688899999999999988874
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc----C
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT----A 162 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~----~ 162 (298)
+++|++||+||..... +.++++ +++|+.++.++++++.+. + .++||++||...+. .
T Consensus 88 -~~~D~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~~~----~--------~~~iV~~SS~~~~g~~~~~ 147 (333)
T 2q1w_A 88 -LQPDAVVHTAASYKDP-----DDWYND--TLTNCVGGSNVVQAAKKN----N--------VGRFVYFQTALCYGVKPIQ 147 (333)
T ss_dssp -HCCSEEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHHHT----T--------CSEEEEEEEGGGGCSCCCS
T ss_pred -cCCcEEEECceecCCC-----ccCChH--HHHHHHHHHHHHHHHHHh----C--------CCEEEEECcHHHhCCCccc
Confidence 2799999999965432 223444 999999999999998762 2 36899999977653 2
Q ss_pred C--------CCc-hhhHHHHHHHHHHHHH-HHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhh------cc
Q 022386 163 T--------WYQ-IHVSAAKAAVDSITRS-LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY------MA 226 (298)
Q Consensus 163 ~--------~~~-~~Y~~sK~a~~~l~~~-la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~------~~ 226 (298)
. .+. ..|+.+|.+++.+++. ++ ++..+.|+.+..+... ......+....... ..
T Consensus 148 ~~~~~~E~~~p~~~~Y~~sK~~~E~~~~~s~~---------~~~ilR~~~v~gp~~~-~~~~~~~~~~~~~~~~~~~~~~ 217 (333)
T 2q1w_A 148 QPVRLDHPRNPANSSYAISKSANEDYLEYSGL---------DFVTFRLANVVGPRNV-SGPLPIFFQRLSEGKKCFVTKA 217 (333)
T ss_dssp SSBCTTSCCCCTTCHHHHHHHHHHHHHHHHTC---------CEEEEEESEEESTTCC-SSHHHHHHHHHHTTCCCEEEEC
T ss_pred CCCCcCCCCCCCCCchHHHHHHHHHHHHhhhC---------CeEEEeeceEECcCCc-CcHHHHHHHHHHcCCeeeCCCc
Confidence 1 223 6899999999999987 53 4566777777655411 11112222222111 22
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhhh
Q 022386 227 AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVER 284 (298)
Q Consensus 227 ~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~~ 284 (298)
...+.+++|+|+++.+++..+. |+.+++++|..++ ...+.+.+.+.+..
T Consensus 218 ~~~~i~v~Dva~ai~~~~~~~~----g~~~~v~~~~~~s-----~~e~~~~i~~~~g~ 266 (333)
T 2q1w_A 218 RRDFVFVKDLARATVRAVDGVG----HGAYHFSSGTDVA-----IKELYDAVVEAMAL 266 (333)
T ss_dssp EECEEEHHHHHHHHHHHHTTCC----CEEEECSCSCCEE-----HHHHHHHHHHHTTC
T ss_pred eEeeEEHHHHHHHHHHHHhcCC----CCEEEeCCCCCcc-----HHHHHHHHHHHhCC
Confidence 3457789999999999997643 8899999987664 34555555554443
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.8e-22 Score=178.62 Aligned_cols=243 Identities=14% Similarity=0.033 Sum_probs=178.2
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCC-----CCeEEEEccCCCHHHHHHHHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-----IPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
++++|++|||||+|+||.++++.|+++|++|++++|+..........+.... .++.++.+|++|.+++.++++
T Consensus 22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-- 99 (351)
T 3ruf_A 22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK-- 99 (351)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT--
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc--
Confidence 4678999999999999999999999999999999997654444444444321 568999999999998888775
Q ss_pred HHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
++|++||+|+.... ....+++...+++|+.++..+++++... + .+++|++||...+...
T Consensus 100 -----~~d~Vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~--------~~~~v~~SS~~vyg~~ 158 (351)
T 3ruf_A 100 -----GVDHVLHQAALGSV----PRSIVDPITTNATNITGFLNILHAAKNA----Q--------VQSFTYAASSSTYGDH 158 (351)
T ss_dssp -----TCSEEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHT----T--------CSEEEEEEEGGGGTTC
T ss_pred -----CCCEEEECCccCCc----chhhhCHHHHHHHHHHHHHHHHHHHHHc----C--------CCEEEEEecHHhcCCC
Confidence 79999999995321 1234556788999999999999988643 2 3579999998765332
Q ss_pred C-----------CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC----ChHHHHHHHhhhcc--
Q 022386 164 W-----------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL----APEEIRSKATDYMA-- 226 (298)
Q Consensus 164 ~-----------~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~----~~~~~~~~~~~~~~-- 226 (298)
+ +...|+.+|.+.+.+++.++.+. |++++.+.|+.+..+...... .-..+........+
T Consensus 159 ~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (351)
T 3ruf_A 159 PALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTY----GFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVY 234 (351)
T ss_dssp CCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCE
T ss_pred CCCCCccCCCCCCCChhHHHHHHHHHHHHHHHHHh----CCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcE
Confidence 2 24689999999999999998886 599999999999876543221 11233333322221
Q ss_pred -------CCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhhh
Q 022386 227 -------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVER 284 (298)
Q Consensus 227 -------~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~~ 284 (298)
...+...+|+|++++.++... ....|+.+++.+|..++ ...+.+.+.+.+..
T Consensus 235 ~~g~g~~~~~~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~s-----~~e~~~~i~~~~g~ 293 (351)
T 3ruf_A 235 INGDGETSRDFCYIDNVIQMNILSALAK-DSAKDNIYNVAVGDRTT-----LNELSGYIYDELNL 293 (351)
T ss_dssp EESSSCCEECCEEHHHHHHHHHHHHTCC-GGGCSEEEEESCSCCEE-----HHHHHHHHHHHHHT
T ss_pred EeCCCCeEEeeEEHHHHHHHHHHHHhhc-cccCCCEEEeCCCCccc-----HHHHHHHHHHHhCc
Confidence 124667999999999888652 24568999999887665 45555555555544
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-22 Score=185.88 Aligned_cols=223 Identities=13% Similarity=0.001 Sum_probs=161.1
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh---HHHHHHHHHHh---------CCCCeEEEEccCCCHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT---VLRSAVAALHS---------LGIPAIGLEGDVRKRE 74 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~---~~~~~~~~~~~---------~~~~~~~~~~Dls~~~ 74 (298)
+....+|+||||||+|+||.+++++|+++|++|++++|+.. ..+++.+.+.. ...++.++.+|+++.+
T Consensus 64 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 143 (427)
T 4f6c_A 64 LSHRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMD 143 (427)
T ss_dssp SCCCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---C
T ss_pred CCCCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcc
Confidence 44566889999999999999999999999999999999876 33344443322 2467999999999988
Q ss_pred HHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEe
Q 022386 75 DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI 154 (298)
Q Consensus 75 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~v 154 (298)
++. .++++|+|||||+... ..+.++..+++|+.++.++++++.+ . ..+||++
T Consensus 144 ~l~--------~~~~~d~Vih~A~~~~-------~~~~~~~~~~~Nv~g~~~l~~aa~~--~-----------~~~~v~~ 195 (427)
T 4f6c_A 144 DVV--------LPENMDTIIHAGARTD-------HFGDDDEFEKVNVQGTVDVIRLAQQ--H-----------HARLIYV 195 (427)
T ss_dssp CCC--------CSSCCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHH--T-----------TCEEEEE
T ss_pred cCC--------CcCCCCEEEECCcccC-------CCCCHHHHHHHHHHHHHHHHHHHHh--c-----------CCcEEEE
Confidence 777 4579999999999642 2356788999999999999999987 1 4679999
Q ss_pred ccccc--c----------------cCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCCh--
Q 022386 155 SATLH--Y----------------TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-- 214 (298)
Q Consensus 155 ss~~~--~----------------~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~-- 214 (298)
||... . .+......|+.+|.+.+.+++.++. .|++++.+.||.|.++........
T Consensus 196 SS~~~G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-----~g~~~~ivRpg~v~G~~~~~~~~~~~ 270 (427)
T 4f6c_A 196 STISVGTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN-----NGLDGRIVRVGNLTSPYNGRWHMRNI 270 (427)
T ss_dssp EEGGGGSEECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH-----TTCCEEEEEECCEESCSSSCCCCTTG
T ss_pred CchHhCCCccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH-----cCCCEEEEeCCeeecCCCCCccccCc
Confidence 99776 0 0012567899999999999998743 379999999999987754332111
Q ss_pred -----HHHHHHHhhh--------ccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 215 -----EEIRSKATDY--------MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 215 -----~~~~~~~~~~--------~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
..+....... .....+...+|+|+++++++.... .|+++++++|..++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~---~g~~~~l~~~~~~s 331 (427)
T 4f6c_A 271 KTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNKMP 331 (427)
T ss_dssp GGCHHHHHHHHHHHSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSCC---CCSEEEESCSCCEE
T ss_pred chHHHHHHHHHHHhcCCCCCccccceEEEeeHHHHHHHHHHHHcCCC---CCCEEEecCCCCCc
Confidence 1222222111 122347788999999999997644 79999999987654
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=4.3e-22 Score=163.78 Aligned_cols=199 Identities=15% Similarity=0.095 Sum_probs=147.9
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
+++++||||+|+||++++++|+++|++|++++|+.+..+.. ...++.++.+|++|+++++++++ .+|
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~-------~~d 69 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTVA-------GQD 69 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHHT-------TCS
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc------cCCceEEEEecCCCHHHHHHHHc-------CCC
Confidence 47999999999999999999999999999999987643211 13568899999999998888765 689
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC----Cch
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW----YQI 167 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~----~~~ 167 (298)
++||++|..... +. .++|+.++..+++++... + .+++|++||...+...+ ...
T Consensus 70 ~vi~~a~~~~~~---~~--------~~~n~~~~~~~~~~~~~~----~--------~~~~v~~Ss~~~~~~~~~~~~~~~ 126 (206)
T 1hdo_A 70 AVIVLLGTRNDL---SP--------TTVMSEGARNIVAAMKAH----G--------VDKVVACTSAFLLWDPTKVPPRLQ 126 (206)
T ss_dssp EEEECCCCTTCC---SC--------CCHHHHHHHHHHHHHHHH----T--------CCEEEEECCGGGTSCTTCSCGGGH
T ss_pred EEEECccCCCCC---Cc--------cchHHHHHHHHHHHHHHh----C--------CCeEEEEeeeeeccCcccccccch
Confidence 999999964331 11 137888888888777642 2 36799999987664443 567
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~ 247 (298)
.|+.+|.+++.+++. .+++++.+.||.+........... . . ...+.+.+.+++|+|+++.+++..+
T Consensus 127 ~y~~~K~~~e~~~~~--------~~i~~~~lrp~~~~~~~~~~~~~~-~----~-~~~~~~~~i~~~Dva~~~~~~~~~~ 192 (206)
T 1hdo_A 127 AVTDDHIRMHKVLRE--------SGLKYVAVMPPHIGDQPLTGAYTV-T----L-DGRGPSRVISKHDLGHFMLRCLTTD 192 (206)
T ss_dssp HHHHHHHHHHHHHHH--------TCSEEEEECCSEEECCCCCSCCEE-E----S-SSCSSCSEEEHHHHHHHHHHTTSCS
T ss_pred hHHHHHHHHHHHHHh--------CCCCEEEEeCCcccCCCCCcceEe-c----c-cCCCCCCccCHHHHHHHHHHHhcCc
Confidence 899999999988742 379999999999832221111100 0 0 1112146789999999999999764
Q ss_pred CCCccccEEEeCCCC
Q 022386 248 GKYVNGNTLIVDGGN 262 (298)
Q Consensus 248 ~~~~~G~~i~~dgG~ 262 (298)
..+|+.++++||.
T Consensus 193 --~~~g~~~~i~~g~ 205 (206)
T 1hdo_A 193 --EYDGHSTYPSHQY 205 (206)
T ss_dssp --TTTTCEEEEECCC
T ss_pred --cccccceeeeccc
Confidence 3789999999985
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.4e-23 Score=222.51 Aligned_cols=178 Identities=16% Similarity=0.145 Sum_probs=141.5
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCc-EEEEcCChhH---HHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTV---LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~-Vv~~~r~~~~---~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.+|+++||||++|||+++|++|+++|++ |++++|+..+ ..+..+++...+.++.++.||++|.++++++++++. .
T Consensus 1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~-~ 1961 (2512)
T 2vz8_A 1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEAT-Q 1961 (2512)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHH-H
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHH-h
Confidence 5899999999999999999999999997 7888888543 344556666677889999999999999999999987 4
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
++++|++|||||+....++.+.+.++|++.+++|+.|++++++++.+.|.+ .|+||++||..+..+.++.
T Consensus 1962 ~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~----------~g~iV~iSS~ag~~g~~g~ 2031 (2512)
T 2vz8_A 1962 LGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPE----------LDYFVIFSSVSCGRGNAGQ 2031 (2512)
T ss_dssp HSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTT----------CCEEEEECCHHHHTTCTTC
T ss_pred cCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhccc----------CCEEEEecchhhcCCCCCc
Confidence 899999999999877788889999999999999999999999999998864 3789999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCccc
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 204 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~ 204 (298)
..|+++|+++++|++.+..+ |+...++..|.+.
T Consensus 2032 ~~Y~aaKaal~~l~~~rr~~-----Gl~~~a~~~g~~~ 2064 (2512)
T 2vz8_A 2032 ANYGFANSAMERICEKRRHD-----GLPGLAVQWGAIG 2064 (2512)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-----TSCCCEEEECCBC
T ss_pred HHHHHHHHHHHHHHHHHHHC-----CCcEEEEEccCcC
Confidence 99999999999999977554 5666777776653
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-22 Score=180.79 Aligned_cols=232 Identities=17% Similarity=0.142 Sum_probs=167.3
Q ss_pred cEEEEecCCchhHHHHHHHHHHc--CCcEEEEcCChhH-HHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 13 KVALLTGGGSGIGFEISLQLGKH--GAAIAIMGRRKTV-LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~--G~~Vv~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
|++|||||+|+||.+++++|+++ |++|++++|+... ..+..+.+ ...++.++.+|++|.++++++++ .
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~-------~ 75 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI--LGDRVELVVGDIADAELVDKLAA-------K 75 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG--CSSSEEEEECCTTCHHHHHHHHT-------T
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhh--ccCCeEEEECCCCCHHHHHHHhh-------c
Confidence 68999999999999999999999 8999999986421 01111111 13568899999999998888775 5
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc--------
Q 022386 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-------- 161 (298)
Q Consensus 90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~-------- 161 (298)
+|++||+||.... +.+.++++..+++|+.++.++++++.+. + ++||++||...+.
T Consensus 76 ~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~---------~~~v~~SS~~vyg~~~~~~~~ 138 (348)
T 1oc2_A 76 ADAIVHYAAESHN----DNSLNDPSPFIHTNFIGTYTLLEAARKY----D---------IRFHHVSTDEVYGDLPLREDL 138 (348)
T ss_dssp CSEEEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHHH----T---------CEEEEEEEGGGGCCBCCGGGS
T ss_pred CCEEEECCcccCc----cchhhCHHHHHHHHHHHHHHHHHHHHHh----C---------CeEEEecccceeCCCcccccc
Confidence 6999999996421 1123556789999999999999999875 1 3699999975431
Q ss_pred ---------------CCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhc-
Q 022386 162 ---------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM- 225 (298)
Q Consensus 162 ---------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~- 225 (298)
+..+...|+.+|.+.+.+++.++.++ |++++.+.||.+.++..........+........
T Consensus 139 ~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~ 214 (348)
T 1oc2_A 139 PGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF----GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIK 214 (348)
T ss_dssp TTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCC
T ss_pred cccccccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh----CCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCC
Confidence 12345689999999999999998886 5999999999998875432111122222222211
Q ss_pred --------cCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhh
Q 022386 226 --------AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAV 282 (298)
Q Consensus 226 --------~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~ 282 (298)
....+.+++|+|+++.+++... .+|+.+++++|..++ ...+.+.+.+.+
T Consensus 215 ~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~---~~g~~~~i~~~~~~s-----~~e~~~~i~~~~ 271 (348)
T 1oc2_A 215 PKLYGEGKNVRDWIHTNDHSTGVWAILTKG---RMGETYLIGADGEKN-----NKEVLELILEKM 271 (348)
T ss_dssp CEEETTSCCEEECEEHHHHHHHHHHHHHHC---CTTCEEEECCSCEEE-----HHHHHHHHHHHT
T ss_pred ceEecCCCceEeeEEHHHHHHHHHHHhhCC---CCCCeEEeCCCCCCC-----HHHHHHHHHHHh
Confidence 1235678999999999998643 379999999987654 344444444444
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.7e-22 Score=182.15 Aligned_cols=233 Identities=17% Similarity=0.070 Sum_probs=168.1
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
.++++++||||+|+||.+++++|+++|++|++++|+...... ....++.++.+|++|.++++++++ +
T Consensus 27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~v~~~~~Dl~d~~~~~~~~~-------~ 93 (379)
T 2c5a_A 27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT------EDMFCDEFHLVDLRVMENCLKVTE-------G 93 (379)
T ss_dssp TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC------GGGTCSEEEECCTTSHHHHHHHHT-------T
T ss_pred ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchh------hccCCceEEECCCCCHHHHHHHhC-------C
Confidence 356899999999999999999999999999999998643211 012357889999999998888774 7
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc--------
Q 022386 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-------- 161 (298)
Q Consensus 90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~-------- 161 (298)
+|++||+|+....... ..+++++.+++|+.++.++++++... + .++||++||...+.
T Consensus 94 ~d~Vih~A~~~~~~~~---~~~~~~~~~~~Nv~g~~~ll~a~~~~----~--------~~~~V~~SS~~v~~~~~~~~~~ 158 (379)
T 2c5a_A 94 VDHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMIEAARIN----G--------IKRFFYASSACIYPEFKQLETT 158 (379)
T ss_dssp CSEEEECCCCCCCHHH---HTTCHHHHHHHHHHHHHHHHHHHHHT----T--------CSEEEEEEEGGGSCGGGSSSSS
T ss_pred CCEEEECceecCcccc---cccCHHHHHHHHHHHHHHHHHHHHHc----C--------CCEEEEEeehheeCCCCCCCcc
Confidence 9999999996432110 02356788999999999999988632 2 35799999976543
Q ss_pred ----------CCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC----ChHHHHHHHhhhcc-
Q 022386 162 ----------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL----APEEIRSKATDYMA- 226 (298)
Q Consensus 162 ----------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~----~~~~~~~~~~~~~~- 226 (298)
+..+...|+.+|.+.+.+++.++.+. |++++.+.||.+.++...... ....+........+
T Consensus 159 ~~~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (379)
T 2c5a_A 159 NVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF----GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDR 234 (379)
T ss_dssp SCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSC
T ss_pred CCCcCcccCCCCCCCChhHHHHHHHHHHHHHHHHHH----CCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCc
Confidence 12235689999999999999998875 599999999999877533211 11223333322111
Q ss_pred ---------CCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhh
Q 022386 227 ---------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVE 283 (298)
Q Consensus 227 ---------~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~ 283 (298)
...+.+++|+|+++++++..+ .|+.+++.+|..++ ...+.+.+.+.+.
T Consensus 235 ~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~----~~~~~ni~~~~~~s-----~~e~~~~i~~~~g 291 (379)
T 2c5a_A 235 FEMWGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS-----MNEMAEMVLSFEE 291 (379)
T ss_dssp EEEESCSCCEECCEEHHHHHHHHHHHHHSS----CCSCEEECCCCCEE-----HHHHHHHHHHTTT
T ss_pred eEEeCCCCeeEEEEEHHHHHHHHHHHhhcc----CCCeEEeCCCCccC-----HHHHHHHHHHHhC
Confidence 234667999999999998653 46788998886654 3445555544443
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.5e-23 Score=181.43 Aligned_cols=230 Identities=15% Similarity=0.035 Sum_probs=167.3
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
|++|||||+|+||++++++|+++|++|++++|+.+...+. ....+.++.+|++|.+ +.++++ . |+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~Dl~d~~-~~~~~~-------~-d~ 65 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREF------VNPSAELHVRDLKDYS-WGAGIK-------G-DV 65 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGG------SCTTSEEECCCTTSTT-TTTTCC-------C-SE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhh------cCCCceEEECccccHH-HHhhcC-------C-CE
Confidence 4799999999999999999999999999999976432211 1456889999999987 655443 3 99
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC----------
Q 022386 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA---------- 162 (298)
Q Consensus 93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~---------- 162 (298)
+||+|+.... ..+.++++..+++|+.++.++++++... + .++||++||...+..
T Consensus 66 vih~A~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~--------~~~iv~~SS~~vyg~~~~~~~~e~~ 129 (312)
T 3ko8_A 66 VFHFAANPEV----RLSTTEPIVHFNENVVATFNVLEWARQT----G--------VRTVVFASSSTVYGDADVIPTPEEE 129 (312)
T ss_dssp EEECCSSCSS----SGGGSCHHHHHHHHHHHHHHHHHHHHHH----T--------CCEEEEEEEGGGGCSCSSSSBCTTS
T ss_pred EEECCCCCCc----hhhhhCHHHHHHHHHHHHHHHHHHHHHc----C--------CCEEEEeCcHHHhCCCCCCCCCCCC
Confidence 9999995322 2344567888999999999999988542 2 367999999776532
Q ss_pred -CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhh-c---------cCCCCC
Q 022386 163 -TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY-M---------AAYKFG 231 (298)
Q Consensus 163 -~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~-~---------~~~~~~ 231 (298)
..+...|+.+|.+.+.+++.++.++ |++++.+.||.+.++...... ...+....... . ....+.
T Consensus 130 ~~~p~~~Y~~sK~~~e~~~~~~~~~~----g~~~~~lrp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~i 204 (312)
T 3ko8_A 130 PYKPISVYGAAKAAGEVMCATYARLF----GVRCLAVRYANVVGPRLRHGV-IYDFIMKLRRNPNVLEVLGDGTQRKSYL 204 (312)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEECTTCCSSH-HHHHHHHHHHCTTEEEEC----CEECEE
T ss_pred CCCCCChHHHHHHHHHHHHHHHHHHh----CCCEEEEeeccccCcCCCCCh-HHHHHHHHHhCCCCeEEcCCCCeEEeeE
Confidence 2235789999999999999999886 599999999999987543321 12222222221 1 112456
Q ss_pred CHHHHHHHHHHhcCC-CCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhh
Q 022386 232 EKWDIAMAALYLASD-AGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVE 283 (298)
Q Consensus 232 ~~~dva~~~~~L~s~-~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~ 283 (298)
.++|+|+++++++.. ......|+.+++.+|..++ ...+.+.+.+.+.
T Consensus 205 ~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~~~~~s-----~~e~~~~i~~~~g 252 (312)
T 3ko8_A 205 YVRDAVEATLAAWKKFEEMDAPFLALNVGNVDAVR-----VLDIAQIVAEVLG 252 (312)
T ss_dssp EHHHHHHHHHHHHHHHHHSCCSEEEEEESCSSCEE-----HHHHHHHHHHHHT
T ss_pred EHHHHHHHHHHHHHhccccCCCCcEEEEcCCCcee-----HHHHHHHHHHHhC
Confidence 799999999999865 2234578899999987665 3555555555543
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1e-22 Score=178.56 Aligned_cols=229 Identities=16% Similarity=0.111 Sum_probs=164.6
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l 93 (298)
++|||||+|+||++++++|+++|++|++++|...... ......+.++.+|++|.++++++++. .++|++
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~------~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~d~v 70 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKR------ENVPKGVPFFRVDLRDKEGVERAFRE-----FRPTHV 70 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCG------GGSCTTCCEECCCTTCHHHHHHHHHH-----HCCSEE
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCch------hhcccCeEEEECCCCCHHHHHHHHHh-----cCCCEE
Confidence 6999999999999999999999999999998542111 01123577889999999999988864 279999
Q ss_pred EECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccc-ccccC----------
Q 022386 94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT-LHYTA---------- 162 (298)
Q Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~-~~~~~---------- 162 (298)
||+|+.... ..+.++++..+++|+.+++++++++.. .+ .++||++||. ..+..
T Consensus 71 i~~a~~~~~----~~~~~~~~~~~~~N~~g~~~l~~a~~~----~~--------~~~iv~~SS~~~~~g~~~~~~~~~E~ 134 (311)
T 2p5y_A 71 SHQAAQASV----KVSVEDPVLDFEVNLLGGLNLLEACRQ----YG--------VEKLVFASTGGAIYGEVPEGERAEET 134 (311)
T ss_dssp EECCSCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHH----TT--------CSEEEEEEEHHHHHCCCCTTCCBCTT
T ss_pred EECccccCc----hhhhhCHHHHHHHHHHHHHHHHHHHHH----hC--------CCEEEEeCCChhhcCCCCCCCCcCCC
Confidence 999985321 123456788999999999999998863 22 3679999997 32211
Q ss_pred --CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC---hHHHHHHHhhhcc-----------
Q 022386 163 --TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---PEEIRSKATDYMA----------- 226 (298)
Q Consensus 163 --~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~---~~~~~~~~~~~~~----------- 226 (298)
..+...|+.||.+++.+++.++.++ |++++.+.||.+.++....... -..+........+
T Consensus 135 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (311)
T 2p5y_A 135 WPPRPKSPYAASKAAFEHYLSVYGQSY----GLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGD 210 (311)
T ss_dssp SCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTS
T ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHc----CCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCC
Confidence 1235689999999999999998875 5999999999998875432211 1122222222111
Q ss_pred ---CCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhh
Q 022386 227 ---AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVE 283 (298)
Q Consensus 227 ---~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~ 283 (298)
.+.+..++|+|+++.+++..+ |+.+++.+|..++ ...+.+.+.+.+.
T Consensus 211 g~~~~~~i~v~Dva~a~~~~~~~~-----~~~~~i~~~~~~s-----~~e~~~~i~~~~g 260 (311)
T 2p5y_A 211 EGCVRDYVYVGDVAEAHALALFSL-----EGIYNVGTGEGHT-----TREVLMAVAEAAG 260 (311)
T ss_dssp CCCEECEEEHHHHHHHHHHHHHHC-----CEEEEESCSCCEE-----HHHHHHHHHHHHT
T ss_pred CCeEEeeEEHHHHHHHHHHHHhCC-----CCEEEeCCCCCcc-----HHHHHHHHHHHhC
Confidence 124567999999999998642 7899999987664 3455555555444
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=7.6e-22 Score=174.85 Aligned_cols=219 Identities=15% Similarity=0.073 Sum_probs=152.1
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC---CCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL---GIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
+++|++|||||+|+||.+++++|+++|++|+++.|+.+...+... +... ..++.++.+|++|.++++++++
T Consensus 3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----- 76 (337)
T 2c29_D 3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKH-LLDLPKAETHLTLWKADLADEGSFDEAIK----- 76 (337)
T ss_dssp ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHH-HHTSTTHHHHEEEEECCTTSTTTTHHHHT-----
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHH-HHhcccCCCeEEEEEcCCCCHHHHHHHHc-----
Confidence 468999999999999999999999999999999998654333222 1111 1247889999999988887764
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC--
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-- 164 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~-- 164 (298)
.+|++||+|+... ....+ ...+.+++|+.++.++++++.+... .++||++||..+..+.+
T Consensus 77 --~~d~Vih~A~~~~---~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~~-----------~~riV~~SS~~~~~~~~~~ 138 (337)
T 2c29_D 77 --GCTGVFHVATPMD---FESKD--PENEVIKPTIEGMLGIMKSCAAAKT-----------VRRLVFTSSAGTVNIQEHQ 138 (337)
T ss_dssp --TCSEEEECCCCCC---SSCSS--HHHHTHHHHHHHHHHHHHHHHHHSC-----------CCEEEEECCGGGTSCSSSC
T ss_pred --CCCEEEEeccccC---CCCCC--hHHHHHHHHHHHHHHHHHHHHhCCC-----------ccEEEEeeeHhhcccCCCC
Confidence 6899999998531 11222 2356899999999999999886531 36799999987543211
Q ss_pred --------------------CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHH---H
Q 022386 165 --------------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK---A 221 (298)
Q Consensus 165 --------------------~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~---~ 221 (298)
....|+.||.+.+.+++.++.+. |++++.+.|+.+.++....... ...... .
T Consensus 139 ~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi~~~~lrp~~v~Gp~~~~~~~-~~~~~~~~~~ 213 (337)
T 2c29_D 139 LPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKEN----NIDFITIIPTLVVGPFIMSSMP-PSLITALSPI 213 (337)
T ss_dssp CSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHH----TCCEEEEEECEEESCCSCSSCC-HHHHHHTHHH
T ss_pred CcccCcccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHHc----CCcEEEEeCCceECCCCCCCCC-chHHHHHHHH
Confidence 22369999999999998877653 6999999999999875433322 111111 0
Q ss_pred h------hhccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCC
Q 022386 222 T------DYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDG 260 (298)
Q Consensus 222 ~------~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dg 260 (298)
. ...+..++..++|+|+++++++... ...|. +++.+
T Consensus 214 ~g~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~--~~~~~-~~~~~ 255 (337)
T 2c29_D 214 TGNEAHYSIIRQGQFVHLDDLCNAHIYLFENP--KAEGR-YICSS 255 (337)
T ss_dssp HTCGGGHHHHTEEEEEEHHHHHHHHHHHHHCT--TCCEE-EEECC
T ss_pred cCCCccccccCCCCEEEHHHHHHHHHHHhcCc--ccCce-EEEeC
Confidence 0 0112234789999999999998642 23454 34433
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.2e-22 Score=177.94 Aligned_cols=231 Identities=12% Similarity=0.053 Sum_probs=164.1
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
...++++|++|||||+|+||.++++.|+++|++|++++|+.+. .++.++.+|++|.+++.++++
T Consensus 13 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------------~~~~~~~~Dl~d~~~~~~~~~---- 76 (347)
T 4id9_A 13 GLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------------TGGEEVVGSLEDGQALSDAIM---- 76 (347)
T ss_dssp --------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------------SCCSEEESCTTCHHHHHHHHT----
T ss_pred cccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------------CCccEEecCcCCHHHHHHHHh----
Confidence 4557889999999999999999999999999999999998653 457889999999999888775
Q ss_pred HhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC---
Q 022386 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA--- 162 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~--- 162 (298)
++|++||+|+... .+.+.++..+++|+.++..+++++.. .+ .++||++||...+..
T Consensus 77 ---~~d~vih~A~~~~------~~~~~~~~~~~~nv~~~~~ll~a~~~----~~--------~~~~V~~SS~~vyg~~~~ 135 (347)
T 4id9_A 77 ---GVSAVLHLGAFMS------WAPADRDRMFAVNVEGTRRLLDAASA----AG--------VRRFVFASSGEVYPENRP 135 (347)
T ss_dssp ---TCSEEEECCCCCC------SSGGGHHHHHHHHTHHHHHHHHHHHH----TT--------CSEEEEEEEGGGTTTTSC
T ss_pred ---CCCEEEECCcccC------cchhhHHHHHHHHHHHHHHHHHHHHH----cC--------CCeEEEECCHHHhCCCCC
Confidence 7999999998543 23345588999999999999998864 22 367999999655432
Q ss_pred ----------CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccC-------------CcccCc--------
Q 022386 163 ----------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD-------------TAGVSK-------- 211 (298)
Q Consensus 163 ----------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t-------------~~~~~~-------- 211 (298)
..+...|+.+|.+.+.+++.++.+. |++++.+.|+.+.+ +.....
T Consensus 136 ~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~ 211 (347)
T 4id9_A 136 EFLPVTEDHPLCPNSPYGLTKLLGEELVRFHQRSG----AMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQN 211 (347)
T ss_dssp SSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS----SSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHH
T ss_pred CCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHhc----CCceEEEccceEeecccccccccccCCCCcccccccccccc
Confidence 2345689999999999999998874 69999999999972 211000
Q ss_pred ---CChHHHHHHHhhhcc---------CCCC----CCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHH
Q 022386 212 ---LAPEEIRSKATDYMA---------AYKF----GEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAV 275 (298)
Q Consensus 212 ---~~~~~~~~~~~~~~~---------~~~~----~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~ 275 (298)
..-..+........+ ...+ ..++|+|++++.++..+. ..|+.+++.+|..++ ...+.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~--~~~~~~ni~~~~~~s-----~~e~~ 284 (347)
T 4id9_A 212 FGNAAIAELLQSRDIGEPSHILARNENGRPFRMHITDTRDMVAGILLALDHPE--AAGGTFNLGADEPAD-----FAALL 284 (347)
T ss_dssp HTCHHHHHHHHHHCCSSCCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGG--GTTEEEEESCSSCEE-----HHHHH
T ss_pred cchhHHHHHHHHHHcCCCeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCcc--cCCCeEEECCCCccc-----HHHHH
Confidence 000111111111111 2234 778999999999997642 348899999887664 35555
Q ss_pred HhhHHhhhh
Q 022386 276 NQLSRAVER 284 (298)
Q Consensus 276 ~~~~~~~~~ 284 (298)
+.+.+.+..
T Consensus 285 ~~i~~~~g~ 293 (347)
T 4id9_A 285 PKIAALTGL 293 (347)
T ss_dssp HHHHHHHCC
T ss_pred HHHHHHhCC
Confidence 555555543
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=8.1e-22 Score=175.31 Aligned_cols=243 Identities=13% Similarity=0.049 Sum_probs=167.9
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhH------HHHHHHHHHh-CCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV------LRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~------~~~~~~~~~~-~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
+|+++||||+|+||.+++++|+++|++|++++|+... ..+..+.+.. .+.++.++.+|++|.++++++++..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~- 80 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY- 80 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC-
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc-
Confidence 5899999999999999999999999999999875322 1222233332 2456889999999999998887642
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC--
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-- 162 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~-- 162 (298)
++|++||+|+..... ...+++++.+++|+.++.++++++.. .+ .++||++||...+..
T Consensus 81 ----~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~--------~~~iv~~SS~~~~g~~~ 140 (348)
T 1ek6_A 81 ----SFMAVIHFAGLKAVG----ESVQKPLDYYRVNLTGTIQLLEIMKA----HG--------VKNLVFSSSATVYGNPQ 140 (348)
T ss_dssp ----CEEEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHH----TT--------CCEEEEEEEGGGGCSCS
T ss_pred ----CCCEEEECCCCcCcc----chhhchHHHHHHHHHHHHHHHHHHHH----hC--------CCEEEEECcHHHhCCCC
Confidence 799999999964221 12356788999999999999987542 22 368999999766532
Q ss_pred ----------CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccC----------cCChHHHHHHHh
Q 022386 163 ----------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS----------KLAPEEIRSKAT 222 (298)
Q Consensus 163 ----------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~----------~~~~~~~~~~~~ 222 (298)
.+....|+.+|.+.+.+++.++.+ . + ++++..+.|+.+..+.... ....+.+.....
T Consensus 141 ~~~~~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~-~-~-~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~ 217 (348)
T 1ek6_A 141 YLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQA-D-K-TWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAI 217 (348)
T ss_dssp SSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHH-C-T-TCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHH
T ss_pred CCCcCCCCCCCCCCCchHHHHHHHHHHHHHHHhc-C-C-CcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHH
Confidence 122568999999999999999887 3 2 6999999999887652100 000111222221
Q ss_pred -hhc---------------cCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhh
Q 022386 223 -DYM---------------AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVE 283 (298)
Q Consensus 223 -~~~---------------~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~ 283 (298)
... ....+...+|+|++++.++........++.+++.+|..++ .+.+.+.+.+.+.
T Consensus 218 ~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s-----~~e~~~~i~~~~g 289 (348)
T 1ek6_A 218 GRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYS-----VLQMVQAMEKASG 289 (348)
T ss_dssp TSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEE-----HHHHHHHHHHHHC
T ss_pred hcCCCeEEeCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCcc-----HHHHHHHHHHHhC
Confidence 111 1124567899999999888543222224899998876654 3445555554443
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.6e-21 Score=175.67 Aligned_cols=241 Identities=14% Similarity=0.041 Sum_probs=164.4
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhH-----HHHHHHHHHhCCC-CeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-----LRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~-----~~~~~~~~~~~~~-~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
|++|||||+|+||.++++.|+++|++|++++|+.+. ++.+.+.+...+. ++.++.+|++|.+++.++++.+
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 105 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI--- 105 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc---
Confidence 789999999999999999999999999999997543 2222222211223 6889999999999999988765
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC----
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA---- 162 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~---- 162 (298)
++|++||+||.... ..+.++++..+++|+.++..+++++.+...+++. .++||++||...+..
T Consensus 106 --~~d~Vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~-------~~~~v~~SS~~vyg~~~~~ 172 (381)
T 1n7h_A 106 --KPDEVYNLAAQSHV----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGR-------TVKYYQAGSSEMFGSTPPP 172 (381)
T ss_dssp --CCSEEEECCSCCCH----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCC-------CCEEEEEEEGGGGTTSCSS
T ss_pred --CCCEEEECCcccCc----cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCC-------ccEEEEeCcHHHhCCCCCC
Confidence 79999999996432 1234667889999999999999999998765321 368999999775432
Q ss_pred ------CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCCh---HHHHHHHhhh---------
Q 022386 163 ------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP---EEIRSKATDY--------- 224 (298)
Q Consensus 163 ------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~---~~~~~~~~~~--------- 224 (298)
..+...|+.+|.+.+.+++.++.+++ +.+..+.|..+..+........ ..........
T Consensus 173 ~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~----~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~ 248 (381)
T 1n7h_A 173 QSETTPFHPRSPYAASKCAAHWYTVNYREAYG----LFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGN 248 (381)
T ss_dssp BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC----CEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESC
T ss_pred CCCCCCCCCCCchHHHHHHHHHHHHHHHHHhC----CcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCC
Confidence 23456899999999999999988863 5554454444433321111100 1111111111
Q ss_pred -ccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhh
Q 022386 225 -MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAV 282 (298)
Q Consensus 225 -~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~ 282 (298)
.....+..++|+|+++++++.... ++.+++.+|..++ ...+.+.+.+.+
T Consensus 249 ~~~~~~~v~v~Dva~a~~~~~~~~~----~~~~~i~~~~~~s-----~~e~~~~i~~~~ 298 (381)
T 1n7h_A 249 LQASRDWGFAGDYVEAMWLMLQQEK----PDDYVVATEEGHT-----VEEFLDVSFGYL 298 (381)
T ss_dssp TTCEEECEEHHHHHHHHHHHHTSSS----CCEEEECCSCEEE-----HHHHHHHHHHHT
T ss_pred CCceeeeEEHHHHHHHHHHHHhCCC----CCeEEeeCCCCCc-----HHHHHHHHHHHc
Confidence 112347789999999999997543 4788998887654 344444444433
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.7e-21 Score=175.03 Aligned_cols=172 Identities=17% Similarity=0.078 Sum_probs=134.1
Q ss_pred CcEEEEecCCchhHHHHHHHHH-HcCCcEEEEcCChhH---------HHHHHHHHHhCC-----CC---eEEEEccCCCH
Q 022386 12 GKVALLTGGGSGIGFEISLQLG-KHGAAIAIMGRRKTV---------LRSAVAALHSLG-----IP---AIGLEGDVRKR 73 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~-~~G~~Vv~~~r~~~~---------~~~~~~~~~~~~-----~~---~~~~~~Dls~~ 73 (298)
++++|||||+|+||.+++++|+ ++|++|++++|+... .+.+.+.+.+.. .+ +.++.+|++|.
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 81 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence 4589999999999999999999 999999999987543 334433333331 24 88999999999
Q ss_pred HHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEE
Q 022386 74 EDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIIN 153 (298)
Q Consensus 74 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~ 153 (298)
+++++++++ ++++|++||+|+..... .+.++++..+++|+.++.++++++.. .+ .++||+
T Consensus 82 ~~~~~~~~~----~~~~d~vih~A~~~~~~----~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~--------~~~iv~ 141 (397)
T 1gy8_A 82 DFLNGVFTR----HGPIDAVVHMCAFLAVG----ESVRDPLKYYDNNVVGILRLLQAMLL----HK--------CDKIIF 141 (397)
T ss_dssp HHHHHHHHH----SCCCCEEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHH----TT--------CCEEEE
T ss_pred HHHHHHHHh----cCCCCEEEECCCccCcC----cchhhHHHHHHHHhHHHHHHHHHHHH----hC--------CCEEEE
Confidence 998887763 46799999999964321 13456788999999999999998643 22 468999
Q ss_pred ecccccccCCC------------------CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCc
Q 022386 154 ISATLHYTATW------------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 207 (298)
Q Consensus 154 vss~~~~~~~~------------------~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~ 207 (298)
+||...+.... +...|+.||.+.+.+++.++.++ |++++.+.|+.+..+.
T Consensus 142 ~SS~~v~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~----gi~~~ilRp~~v~G~~ 209 (397)
T 1gy8_A 142 SSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY----GIKGICLRYFNACGAH 209 (397)
T ss_dssp EEEGGGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEECCC
T ss_pred ECCHHHhCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH----CCcEEEEeccceeCCC
Confidence 99965542211 25689999999999999999886 5999999999998664
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.8e-22 Score=178.84 Aligned_cols=232 Identities=18% Similarity=0.120 Sum_probs=165.9
Q ss_pred EEEEecCCchhHHHHHHHHHHc---C---CcEEEEcCChh--HHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 14 VALLTGGGSGIGFEISLQLGKH---G---AAIAIMGRRKT--VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~---G---~~Vv~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
++|||||+|+||++++++|+++ | ++|++++|+.. ..+.+ +.+. .+.++.++.+|++|.+++++++
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~----- 74 (337)
T 1r6d_A 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL-APVD-ADPRLRFVHGDIRDAGLLAREL----- 74 (337)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG-GGGT-TCTTEEEEECCTTCHHHHHHHT-----
T ss_pred eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhh-hhcc-cCCCeEEEEcCCCCHHHHHHHh-----
Confidence 6999999999999999999997 8 89999998642 11111 1111 1356889999999998888776
Q ss_pred HhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc----
Q 022386 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT---- 161 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~---- 161 (298)
.++|++||+|+.... +.+.+++++.+++|+.++.++++++.+.. .++||++||...+.
T Consensus 75 --~~~d~Vih~A~~~~~----~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~------------~~~~v~~SS~~vyg~~~~ 136 (337)
T 1r6d_A 75 --RGVDAIVHFAAESHV----DRSIAGASVFTETNVQGTQTLLQCAVDAG------------VGRVVHVSTNQVYGSIDS 136 (337)
T ss_dssp --TTCCEEEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHHTT------------CCEEEEEEEGGGGCCCSS
T ss_pred --cCCCEEEECCCccCc----hhhhhCHHHHHHHHHHHHHHHHHHHHHcC------------CCEEEEecchHHhCCCCC
Confidence 489999999985421 11234567889999999999999988652 35799999975442
Q ss_pred -------CCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhcc--------
Q 022386 162 -------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA-------- 226 (298)
Q Consensus 162 -------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~-------- 226 (298)
+..+...|+.+|.+.+.+++.++.++ |++++.+.||.+.++..........+........+
T Consensus 137 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (337)
T 1r6d_A 137 GSWTESSPLEPNSPYAASKAGSDLVARAYHRTY----GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGA 212 (337)
T ss_dssp SCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSC
T ss_pred CCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHH----CCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCC
Confidence 22345689999999999999998886 59999999999988754321111222222222111
Q ss_pred -CCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhh
Q 022386 227 -AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAV 282 (298)
Q Consensus 227 -~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~ 282 (298)
...+..++|+|+++.+++... .+|+.+++.+|..++ ...+.+.+.+.+
T Consensus 213 ~~~~~i~v~Dva~a~~~~~~~~---~~g~~~~v~~~~~~s-----~~e~~~~i~~~~ 261 (337)
T 1r6d_A 213 NVREWVHTDDHCRGIALVLAGG---RAGEIYHIGGGLELT-----NRELTGILLDSL 261 (337)
T ss_dssp CEEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCCCEEE-----HHHHHHHHHHHH
T ss_pred eeEeeEeHHHHHHHHHHHHhCC---CCCCEEEeCCCCCcc-----HHHHHHHHHHHh
Confidence 124568899999999998643 368999999987664 344444444444
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=4.4e-22 Score=174.57 Aligned_cols=226 Identities=13% Similarity=0.091 Sum_probs=160.7
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
|++|||||+|+||++++++|+++| .++++.++..... ......+.++.+|+++ +++.++++ ++|+
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~------~~~~~~~~~~~~Dl~~-~~~~~~~~-------~~d~ 66 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNE------EFVNEAARLVKADLAA-DDIKDYLK-------GAEE 66 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCG------GGSCTTEEEECCCTTT-SCCHHHHT-------TCSE
T ss_pred CEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCCh------hhcCCCcEEEECcCCh-HHHHHHhc-------CCCE
Confidence 589999999999999999999999 5555554432111 1123568899999999 77777764 7999
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc-----------
Q 022386 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT----------- 161 (298)
Q Consensus 93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~----------- 161 (298)
+||+|+.... ..+.++++..+++|+.++.++++++.. .+ .++||++||...+.
T Consensus 67 vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~--------~~~iv~~SS~~vyg~~~~~~~~E~~ 130 (313)
T 3ehe_A 67 VWHIAANPDV----RIGAENPDEIYRNNVLATYRLLEAMRK----AG--------VSRIVFTSTSTVYGEAKVIPTPEDY 130 (313)
T ss_dssp EEECCCCCCC----C-CCCCHHHHHHHHHHHHHHHHHHHHH----HT--------CCEEEEECCGGGGCSCSSSSBCTTS
T ss_pred EEECCCCCCh----hhhhhCHHHHHHHHHHHHHHHHHHHHH----cC--------CCeEEEeCchHHhCcCCCCCCCCCC
Confidence 9999985322 233456788999999999999988553 22 36899999977652
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhh-c---------cCCCCC
Q 022386 162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY-M---------AAYKFG 231 (298)
Q Consensus 162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~-~---------~~~~~~ 231 (298)
+..+...|+.+|.+.+.+++.++.++ |++++.+.|+.+.++...... -..+....... . ....+.
T Consensus 131 ~~~~~~~Y~~sK~~~e~~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~i 205 (313)
T 3ehe_A 131 PTHPISLYGASKLACEALIESYCHTF----DMQAWIYRFANVIGRRSTHGV-IYDFIMKLKRNPEELEILGNGEQNKSYI 205 (313)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHT----TCEEEEEECSCEESTTCCCSH-HHHHHHHHHHCTTEEEESTTSCCEECCE
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHhc----CCCEEEEeeccccCcCCCcCh-HHHHHHHHHcCCCceEEeCCCCeEEeEE
Confidence 22345789999999999999999885 699999999999876433211 12222222211 1 123467
Q ss_pred CHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhh
Q 022386 232 EKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAV 282 (298)
Q Consensus 232 ~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~ 282 (298)
..+|+|+++.+++.+ ...|+.+++.+|..++ ...+.+.+.+.+
T Consensus 206 ~v~Dva~a~~~~~~~---~~~~~~~ni~~~~~~s-----~~e~~~~i~~~~ 248 (313)
T 3ehe_A 206 YISDCVDAMLFGLRG---DERVNIFNIGSEDQIK-----VKRIAEIVCEEL 248 (313)
T ss_dssp EHHHHHHHHHHHTTC---CSSEEEEECCCSCCEE-----HHHHHHHHHHHT
T ss_pred EHHHHHHHHHHHhcc---CCCCceEEECCCCCee-----HHHHHHHHHHHh
Confidence 889999999999973 2458899999887665 344455554444
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-22 Score=181.31 Aligned_cols=239 Identities=14% Similarity=0.114 Sum_probs=163.9
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcC-CcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
+.+..+++|+++||||+|+||.+++++|+++| ++|++++|+..... ...+. .+. +.+|+++.+.++.+++.
T Consensus 39 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~----~~~-~~~d~~~~~~~~~~~~~- 110 (357)
T 2x6t_A 39 GGGSGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV----DLN-IADYMDKEDFLIQIMAG- 110 (357)
T ss_dssp ---------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGTT----TSC-CSEEEEHHHHHHHHHTT-
T ss_pred cccccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhccc----Cce-EeeecCcHHHHHHHHhh-
Confidence 34456788999999999999999999999999 89999998754311 01111 122 67899999888887763
Q ss_pred HHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
..++++|++||+|+.... +.+++++.+++|+.++.++++++.+. + . +||++||...+...
T Consensus 111 -~~~~~~d~Vih~A~~~~~------~~~~~~~~~~~n~~~~~~ll~a~~~~----~--------~-r~V~~SS~~v~g~~ 170 (357)
T 2x6t_A 111 -EEFGDVEAIFHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLER----E--------I-PFLYASSAATYGGR 170 (357)
T ss_dssp -CCCSSCCEEEECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHHH----T--------C-CEEEEEEGGGGCSC
T ss_pred -cccCCCCEEEECCcccCC------ccCCHHHHHHHHHHHHHHHHHHHHHc----C--------C-eEEEEcchHHhCCC
Confidence 125689999999996432 12346788999999999999999863 1 2 59999998765332
Q ss_pred C-----------CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc----CChHHHHHHHhhhc---
Q 022386 164 W-----------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK----LAPEEIRSKATDYM--- 225 (298)
Q Consensus 164 ~-----------~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~----~~~~~~~~~~~~~~--- 225 (298)
. +...|+.+|.+.+.+++.++.+. |++++.+.||.+.++..... ..-..+........
T Consensus 171 ~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (357)
T 2x6t_A 171 TSDFIESREYEKPLNVFGYSKFLFDEYVRQILPEA----NSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPK 246 (357)
T ss_dssp SSCCCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGC----SSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCE
T ss_pred CCCCcCCcCCCCCCChhHHHHHHHHHHHHHHHHHc----CCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcE
Confidence 2 25689999999999999987653 69999999999987643211 01122222222111
Q ss_pred ------c-CCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhhh
Q 022386 226 ------A-AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVER 284 (298)
Q Consensus 226 ------~-~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~~ 284 (298)
. ...+..++|+|+++.+++.... |+.+++.+|..++ ...+.+.+.+.+..
T Consensus 247 ~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~----~~~~~i~~~~~~s-----~~e~~~~i~~~~g~ 303 (357)
T 2x6t_A 247 LFEGSENFKRDFVYVGDVADVNLWFLENGV----SGIFNLGTGRAES-----FQAVADATLAYHKK 303 (357)
T ss_dssp EETTGGGCEECEEEHHHHHHHHHHHHHHCC----CEEEEESCSCCEE-----HHHHHHHHHHHHTC
T ss_pred EeCCCCcceEccEEHHHHHHHHHHHHhcCC----CCeEEecCCCccc-----HHHHHHHHHHHcCC
Confidence 1 3356789999999999996543 7899999887654 35555555555443
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=4.1e-21 Score=172.30 Aligned_cols=241 Identities=14% Similarity=0.096 Sum_probs=160.4
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHH-HHHHHHHh----CCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLR-SAVAALHS----LGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~-~~~~~~~~----~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
+|+++||||+|+||.+++++|+++|++|++++|+.+... +..+.+.+ .+.++.++.+|++|.++++++++..
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV--- 77 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence 378999999999999999999999999999999864311 11122211 2356888999999999999988765
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC---
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--- 163 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~--- 163 (298)
++|++||+||..... .+.++++..+++|+.++.++++++.+...+. .++||++||...+...
T Consensus 78 --~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---------~~~iv~~SS~~v~g~~~~~ 142 (372)
T 1db3_A 78 --QPDEVYNLGAMSHVA----VSFESPEYTADVDAMGTLRLLEAIRFLGLEK---------KTRFYQASTSELYGLVQEI 142 (372)
T ss_dssp --CCSEEEECCCCCTTT----TTTSCHHHHHHHHTHHHHHHHHHHHHTTCTT---------TCEEEEEEEGGGGTTCCSS
T ss_pred --CCCEEEECCcccCcc----ccccCHHHHHHHHHHHHHHHHHHHHHhCCCC---------CcEEEEeCChhhhCCCCCC
Confidence 699999999964322 2334567889999999999999998754321 3789999997654321
Q ss_pred --------CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCCh---HHHHHHHhhhc-------
Q 022386 164 --------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP---EEIRSKATDYM------- 225 (298)
Q Consensus 164 --------~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~---~~~~~~~~~~~------- 225 (298)
.+...|+.+|.+++.+++.++.+++ +.+..+.|..+..+........ ...........
T Consensus 143 ~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~----~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g 218 (372)
T 1db3_A 143 PQKETTPFYPRSPYAVAKLYAYWITVNYRESYG----MYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLG 218 (372)
T ss_dssp SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC----CCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEES
T ss_pred CCCccCCCCCCChHHHHHHHHHHHHHHHHHHhC----CCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeec
Confidence 2356899999999999999998863 6666666655544432111111 11111111111
Q ss_pred ---cCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhh
Q 022386 226 ---AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVE 283 (298)
Q Consensus 226 ---~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~ 283 (298)
....+...+|+|+++..++.... ++.+++.+|..++ ...+.+.+.+.+.
T Consensus 219 ~~~~~~~~i~v~Dva~a~~~~~~~~~----~~~~ni~~~~~~s-----~~e~~~~i~~~~g 270 (372)
T 1db3_A 219 NMDSLRDWGHAKDYVKMQWMMLQQEQ----PEDFVIATGVQYS-----VRQFVEMAAAQLG 270 (372)
T ss_dssp CTTCEECCEEHHHHHHHHHHTTSSSS----CCCEEECCCCCEE-----HHHHHHHHHHTTT
T ss_pred CCCceeeeeEHHHHHHHHHHHHhcCC----CceEEEcCCCcee-----HHHHHHHHHHHhC
Confidence 11246789999999998886432 4678887776554 3444555544443
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.1e-21 Score=172.32 Aligned_cols=235 Identities=15% Similarity=0.066 Sum_probs=160.9
Q ss_pred CCCCCCCCCCCcEEEEecCCchhHHHHHHHHHHcC-------CcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHH
Q 022386 2 ESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHG-------AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRE 74 (298)
Q Consensus 2 ~~~~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G-------~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 74 (298)
++......|+++++|||||+|+||.+++++|+++| ++|++++|+.+.... ....++.++.+|++|.+
T Consensus 4 ~~~~~~~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~------~~~~~~~~~~~Dl~d~~ 77 (342)
T 2hrz_A 4 SSGRENLYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA------GFSGAVDARAADLSAPG 77 (342)
T ss_dssp CCSCCCSCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT------TCCSEEEEEECCTTSTT
T ss_pred ccCCCCCCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc------ccCCceeEEEcCCCCHH
Confidence 44555667889999999999999999999999999 899999997542211 12456888999999999
Q ss_pred HHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEe
Q 022386 75 DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI 154 (298)
Q Consensus 75 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~v 154 (298)
+++++++ +++|++||+||... ..+.+++++.+++|+.++.++++++.+...+.+. .++||++
T Consensus 78 ~~~~~~~------~~~d~vih~A~~~~-----~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~-------~~~iv~~ 139 (342)
T 2hrz_A 78 EAEKLVE------ARPDVIFHLAAIVS-----GEAELDFDKGYRINLDGTRYLFDAIRIANGKDGY-------KPRVVFT 139 (342)
T ss_dssp HHHHHHH------TCCSEEEECCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCC-------CCEEEEE
T ss_pred HHHHHHh------cCCCEEEECCccCc-----ccccccHHHHHHHHHHHHHHHHHHHHhcccccCC-------CcEEEEe
Confidence 8888775 48999999999642 1234678899999999999999999876532110 2679999
Q ss_pred cccccccCC-C----------CchhhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEe--CCcccCCcccCcCChHHHHHH
Q 022386 155 SATLHYTAT-W----------YQIHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIA--PGPIKDTAGVSKLAPEEIRSK 220 (298)
Q Consensus 155 ss~~~~~~~-~----------~~~~Y~~sK~a~~~l~~~la~e~~-~~~girv~~i~--PG~v~t~~~~~~~~~~~~~~~ 220 (298)
||...+.+. + +...|+.+|.+.+.+++.++.+.. ....+|++.+. ||.+.+.. ... ...+...
T Consensus 140 SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~--~~~-~~~~~~~ 216 (342)
T 2hrz_A 140 SSIAVFGAPLPYPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAA--SGF-FSNILRE 216 (342)
T ss_dssp EEGGGCCSSCCSSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSG--GGH-HHHHHHH
T ss_pred CchHhhCCCCCCCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchh--HHH-HHHHHHH
Confidence 998765432 1 456899999999999999887642 01235555555 66543221 000 1111222
Q ss_pred Hhhh----ccCCC-----CCCHHHHHHHHHHhcCCCCC-CccccEEEeCCCCCC
Q 022386 221 ATDY----MAAYK-----FGEKWDIAMAALYLASDAGK-YVNGNTLIVDGGNWL 264 (298)
Q Consensus 221 ~~~~----~~~~~-----~~~~~dva~~~~~L~s~~~~-~~~G~~i~~dgG~~~ 264 (298)
.... .+... +.+++|++++++.++..... ...++.+++. |..+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~-g~~~ 269 (342)
T 2hrz_A 217 PLVGQEAVLPVPESIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMP-GLSA 269 (342)
T ss_dssp HHTTCCEEECSCTTCEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECC-CEEE
T ss_pred HhcCCCeeccCCCccceeeEehHHHHHHHHHHHhccccccCCccEEEcC-CCCC
Confidence 2111 11221 45899999999988854321 1136788884 4433
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.87 E-value=1e-21 Score=172.69 Aligned_cols=216 Identities=14% Similarity=0.057 Sum_probs=144.7
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcC-ChhHHHHHHHHHHhC---CCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR-RKTVLRSAVAALHSL---GIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
||++|||||+|+||++++++|+++|++|+++.| +.+..... ..+... ..++.++.+|++|.++++++++
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 73 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDV-SFLTNLPGASEKLHFFNADLSNPDSFAAAIE------ 73 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCC-HHHHTSTTHHHHEEECCCCTTCGGGGHHHHT------
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHH-HHHHhhhccCCceEEEecCCCCHHHHHHHHc------
Confidence 689999999999999999999999999999988 54221111 111111 1247788999999998888765
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC---
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW--- 164 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~--- 164 (298)
.+|++||+|+.. ... ..+.+++.+++|+.+++++++++.+.. + .++||++||..+..+.+
T Consensus 74 -~~d~vih~A~~~---~~~--~~~~~~~~~~~nv~gt~~l~~aa~~~~---~--------~~~iV~~SS~~~~~~~~~~~ 136 (322)
T 2p4h_X 74 -GCVGIFHTASPI---DFA--VSEPEEIVTKRTVDGALGILKACVNSK---T--------VKRFIYTSSGSAVSFNGKDK 136 (322)
T ss_dssp -TCSEEEECCCCC-------------CHHHHHHHHHHHHHHHHHTTCS---S--------CCEEEEEEEGGGTSCSSSCC
T ss_pred -CCCEEEEcCCcc---cCC--CCChHHHHHHHHHHHHHHHHHHHHhcC---C--------ccEEEEeccHHHcccCCCCC
Confidence 689999999632 111 112245689999999999999887541 1 36799999987543221
Q ss_pred -------------------CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHH---HHh
Q 022386 165 -------------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS---KAT 222 (298)
Q Consensus 165 -------------------~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~---~~~ 222 (298)
....|+.||.+.+.+++.++.+ +|++++.+.||.+.++....... ..... ...
T Consensus 137 ~~~~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~----~gi~~~~lrp~~v~g~~~~~~~~-~~~~~~~~~~~ 211 (322)
T 2p4h_X 137 DVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ----NGIDVVTLILPFIVGRFVCPKLP-DSIEKALVLVL 211 (322)
T ss_dssp SEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEECEEESCCCSSSCC-HHHHHHTHHHH
T ss_pred eecCCccccchhhhcccCcccccHHHHHHHHHHHHHHHHHh----cCCcEEEEcCCceECCCCCCCCC-chHHHHHHHHh
Confidence 0116999999888887766554 37999999999999875433222 11111 011
Q ss_pred hh-ccCC----CCCCHHHHHHHHHHhcCCCCCCccccEEEeC
Q 022386 223 DY-MAAY----KFGEKWDIAMAALYLASDAGKYVNGNTLIVD 259 (298)
Q Consensus 223 ~~-~~~~----~~~~~~dva~~~~~L~s~~~~~~~G~~i~~d 259 (298)
.. .... .+.+++|+|+++++++... ..+|+ +++.
T Consensus 212 g~~~~~~~~~~~~i~v~Dva~a~~~~~~~~--~~~g~-~~~~ 250 (322)
T 2p4h_X 212 GKKEQIGVTRFHMVHVDDVARAHIYLLENS--VPGGR-YNCS 250 (322)
T ss_dssp SCGGGCCEEEEEEEEHHHHHHHHHHHHHSC--CCCEE-EECC
T ss_pred CCCccCcCCCcCEEEHHHHHHHHHHHhhCc--CCCCC-EEEc
Confidence 10 0111 3789999999999998653 25676 5443
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=4.8e-21 Score=172.19 Aligned_cols=239 Identities=15% Similarity=0.080 Sum_probs=163.8
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhH-----HHHHHHHHHh-CCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-----LRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~-----~~~~~~~~~~-~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
|++|||||+|+||.++++.|+++|++|++++|+.+. ++.+.+.+.. .+.++.++.+|++|.+++.++++..
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 101 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV--- 101 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc---
Confidence 789999999999999999999999999999997542 2221111111 2346888999999999999988765
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC---
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--- 163 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~--- 163 (298)
++|++||+||.... ..+.++++..+++|+.++.++++++.+...+. .++||++||...+...
T Consensus 102 --~~d~vih~A~~~~~----~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~---------~~~iv~~SS~~~~~~~~~~ 166 (375)
T 1t2a_A 102 --KPTEIYNLGAQSHV----KISFDLAEYTADVDGVGTLRLLDAVKTCGLIN---------SVKFYQASTSELYGKVQEI 166 (375)
T ss_dssp --CCSEEEECCSCCCH----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTT---------TCEEEEEEEGGGTCSCSSS
T ss_pred --CCCEEEECCCcccc----cccccCHHHHHHHHHHHHHHHHHHHHHhCCCc---------cceEEEecchhhhCCCCCC
Confidence 69999999995321 11245678899999999999999997654311 2679999997765321
Q ss_pred --------CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChH---HHHHHHhhh-c------
Q 022386 164 --------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE---EIRSKATDY-M------ 225 (298)
Q Consensus 164 --------~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~---~~~~~~~~~-~------ 225 (298)
.+...|+.+|.+++.+++.++.++ ++.+..+.|+.+..+......... ......... .
T Consensus 167 ~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g 242 (375)
T 1t2a_A 167 PQKETTPFYPRSPYGAAKLYAYWIVVNFREAY----NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLG 242 (375)
T ss_dssp SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEES
T ss_pred CCCccCCCCCCChhHHHHHHHHHHHHHHHHHh----CCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeC
Confidence 235689999999999999998886 478888888777655322211111 111111111 1
Q ss_pred ---cCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhh
Q 022386 226 ---AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAV 282 (298)
Q Consensus 226 ---~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~ 282 (298)
....+...+|+|++++.++.... ++.+++.+|..++ ...+.+.+.+.+
T Consensus 243 ~~~~~~~~i~v~Dva~a~~~~~~~~~----~~~~ni~~~~~~s-----~~e~~~~i~~~~ 293 (375)
T 1t2a_A 243 NLDAKRDWGHAKDYVEAMWLMLQNDE----PEDFVIATGEVHS-----VREFVEKSFLHI 293 (375)
T ss_dssp CTTCEECCEEHHHHHHHHHHHHHSSS----CCCEEECCSCCEE-----HHHHHHHHHHHT
T ss_pred CCCceeeeEEHHHHHHHHHHHHhcCC----CceEEEeCCCccc-----HHHHHHHHHHHh
Confidence 11246789999999999886532 3577887776554 344444444443
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-21 Score=175.04 Aligned_cols=241 Identities=16% Similarity=0.084 Sum_probs=169.4
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHc-CCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCC-CHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR-KREDAVRVVES 82 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls-~~~~~~~~~~~ 82 (298)
-.+..|++|++|||||+|+||.+++++|+++ |++|++++|+.+...... ...++.++.+|++ +.++++++++
T Consensus 17 ~~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~~~~Dl~~d~~~~~~~~~- 90 (372)
T 3slg_A 17 QGPGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLV-----KHERMHFFEGDITINKEWVEYHVK- 90 (372)
T ss_dssp ------CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGG-----GSTTEEEEECCTTTCHHHHHHHHH-
T ss_pred cCCcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhc-----cCCCeEEEeCccCCCHHHHHHHhc-
Confidence 3455677899999999999999999999999 999999999865433221 1246899999999 9999988876
Q ss_pred HHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC
Q 022386 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (298)
Q Consensus 83 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~ 162 (298)
++|++||+|+..... ...++..+.+++|+.++..+++++...- .++|++||...+..
T Consensus 91 ------~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~~-------------~~~v~~SS~~vyg~ 147 (372)
T 3slg_A 91 ------KCDVILPLVAIATPA----TYVKQPLRVFELDFEANLPIVRSAVKYG-------------KHLVFPSTSEVYGM 147 (372)
T ss_dssp ------HCSEEEECBCCCCHH----HHHHCHHHHHHHHTTTTHHHHHHHHHHT-------------CEEEEECCGGGGBS
T ss_pred ------cCCEEEEcCccccHH----HHhhCHHHHHHHHHHHHHHHHHHHHHhC-------------CcEEEeCcHHHhCC
Confidence 599999999964321 1234566788999999999998886432 35999999654422
Q ss_pred C------------------CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC--------ChHH
Q 022386 163 T------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL--------APEE 216 (298)
Q Consensus 163 ~------------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~--------~~~~ 216 (298)
. .+...|+.+|.+.+.+++.++.+ |++++.+.|+.+..+...... .-..
T Consensus 148 ~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~-----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~ 222 (372)
T 3slg_A 148 CADEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGME-----GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQ 222 (372)
T ss_dssp CCCSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT-----TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHH
T ss_pred CCCCCCCccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHC-----CCCEEEEccccccCCCcccccccccccchHHHH
Confidence 1 12337999999999999988644 699999999999876533211 0122
Q ss_pred HHHHHhhhc---------cCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCC-CCCCCCCCCCchhHHHhhHHhhhh
Q 022386 217 IRSKATDYM---------AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDG-GNWLSNPRDLPKEAVNQLSRAVER 284 (298)
Q Consensus 217 ~~~~~~~~~---------~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dg-G~~~~~~~~~~~~~~~~~~~~~~~ 284 (298)
+...+.... ....+...+|+|+++..++..+.....|+.+++.+ |..++ ...+.+.+.+.+..
T Consensus 223 ~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s-----~~e~~~~i~~~~g~ 295 (372)
T 3slg_A 223 FLGHIVRGENISLVDGGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNFS-----VRELANKMLELAAE 295 (372)
T ss_dssp HHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCEEE-----HHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCCcc-----HHHHHHHHHHHhCC
Confidence 222222221 11246688999999999997654446799999988 45654 34555555444443
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.87 E-value=2.2e-21 Score=170.21 Aligned_cols=224 Identities=13% Similarity=0.072 Sum_probs=132.4
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
+|+++||||+|+||++++++|+++|++|++++|+.+. . . ++.+|+++.+++.++++.. ++|
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------~-~--~~~~Dl~d~~~~~~~~~~~-----~~d 62 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----------P-K--FEQVNLLDSNAVHHIIHDF-----QPH 62 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------------CHHHHHHH-----CCS
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----------C-C--eEEecCCCHHHHHHHHHhh-----CCC
Confidence 5899999999999999999999999999999987542 0 1 6789999999998888754 799
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC---------
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA--------- 162 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~--------- 162 (298)
++||+||..... .+.+++++.+++|+.++.++++++.+. ++++|++||...+.+
T Consensus 63 ~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~-------------~~~~v~~SS~~v~~~~~~~~~E~~ 125 (315)
T 2ydy_A 63 VIVHCAAERRPD----VVENQPDAASQLNVDASGNLAKEAAAV-------------GAFLIYISSDYVFDGTNPPYREED 125 (315)
T ss_dssp EEEECC-----------------------CHHHHHHHHHHHHH-------------TCEEEEEEEGGGSCSSSCSBCTTS
T ss_pred EEEECCcccChh----hhhcCHHHHHHHHHHHHHHHHHHHHHc-------------CCeEEEEchHHHcCCCCCCCCCCC
Confidence 999999964321 244677889999999999999999862 247999999876544
Q ss_pred -CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHh-h-------hccCCCCCCH
Q 022386 163 -TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT-D-------YMAAYKFGEK 233 (298)
Q Consensus 163 -~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~ 233 (298)
..+...|+.+|.+.+.+++.++.++. .+|.+.|. |...++. .... ..+..... . ......+.++
T Consensus 126 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~---~lR~~~v~-G~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v 198 (315)
T 2ydy_A 126 IPAPLNLYGKTKLDGEKAVLENNLGAA---VLRIPILY-GEVEKLE--ESAV-TVMFDKVQFSNKSANMDHWQQRFPTHV 198 (315)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHCTTCE---EEEECSEE-CSCSSGG--GSTT-GGGHHHHHCCSSCEEEECSSBBCCEEH
T ss_pred CCCCcCHHHHHHHHHHHHHHHhCCCeE---EEeeeeee-CCCCccc--ccHH-HHHHHHHHhcCCCeeeccCceECcEEH
Confidence 23456899999999999998743321 34444444 3332210 0111 11112111 1 1133467799
Q ss_pred HHHHHHHHHhcCCC-CCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhh
Q 022386 234 WDIAMAALYLASDA-GKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVE 283 (298)
Q Consensus 234 ~dva~~~~~L~s~~-~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~ 283 (298)
+|+|+++.+++... .....|+.+++.+|..++ ...+.+.+.+.+.
T Consensus 199 ~Dva~a~~~~~~~~~~~~~~~~~~~i~~~~~~s-----~~e~~~~i~~~~g 244 (315)
T 2ydy_A 199 KDVATVCRQLAEKRMLDPSIKGTFHWSGNEQMT-----KYEMACAIADAFN 244 (315)
T ss_dssp HHHHHHHHHHHHHHHTCTTCCEEEECCCSCCBC-----HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhhccccCCCCeEEEcCCCccc-----HHHHHHHHHHHhC
Confidence 99999999998643 123468899999987665 4555555554444
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=7.3e-21 Score=168.24 Aligned_cols=225 Identities=14% Similarity=0.033 Sum_probs=158.2
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHH-HHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLR-SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
++++|||||+|+||.+++++|+++|++|++++|+.+... ...+.+. ...++.++.+|++|.++++++++.. ++
T Consensus 14 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~ 87 (335)
T 1rpn_A 14 TRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKA-----QP 87 (335)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc-ccCceEEEECCCCCHHHHHHHHHHc-----CC
Confidence 689999999999999999999999999999999854311 1111111 2345888999999999999988765 69
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC------
Q 022386 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW------ 164 (298)
Q Consensus 91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~------ 164 (298)
|++||+|+..... ...++++..+++|+.++.++++++.+.-. .++||++||...+....
T Consensus 88 d~Vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-----------~~~~v~~SS~~v~g~~~~~~~~E 152 (335)
T 1rpn_A 88 QEVYNLAAQSFVG----ASWNQPVTTGVVDGLGVTHLLEAIRQFSP-----------ETRFYQASTSEMFGLIQAERQDE 152 (335)
T ss_dssp SEEEECCSCCCHH----HHTTSHHHHHHHHTHHHHHHHHHHHHHCT-----------TSEEEEEEEGGGGCSCSSSSBCT
T ss_pred CEEEECccccchh----hhhhChHHHHHHHHHHHHHHHHHHHHhCC-----------CCeEEEEeCHHHhCCCCCCCCCc
Confidence 9999999953211 01234678899999999999999875410 25799999976543321
Q ss_pred -----CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCCh---HHHHHHHhhhc-c---------
Q 022386 165 -----YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP---EEIRSKATDYM-A--------- 226 (298)
Q Consensus 165 -----~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~---~~~~~~~~~~~-~--------- 226 (298)
+...|+.+|.+.+.+++.++.++ ++++..+.|+.+..+........ ..+........ +
T Consensus 153 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~~----~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~ 228 (335)
T 1rpn_A 153 NTPFYPRSPYGVAKLYGHWITVNYRESF----GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDA 228 (335)
T ss_dssp TSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTC
T ss_pred ccCCCCCChhHHHHHHHHHHHHHHHHHc----CCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcc
Confidence 24579999999999999998876 47888899988876543222111 11111111111 1
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 227 AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 227 ~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
...+...+|+|+++..++..+. ++.+++.+|..++
T Consensus 229 ~~~~i~v~Dva~a~~~~~~~~~----~~~~ni~~~~~~s 263 (335)
T 1rpn_A 229 KRDWGFAGDYVEAMWLMLQQDK----ADDYVVATGVTTT 263 (335)
T ss_dssp EEECEEHHHHHHHHHHHHHSSS----CCCEEECCSCEEE
T ss_pred eeceEEHHHHHHHHHHHHhcCC----CCEEEEeCCCCcc
Confidence 1235678999999999986542 3678888876554
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-20 Score=166.65 Aligned_cols=235 Identities=14% Similarity=0.074 Sum_probs=164.8
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
|+++||||+|+||.+++++|+++|++|++++|+..... .....++.++.+|++|.++++++++. .++|+
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~ 70 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE------DAITEGAKFYNGDLRDKAFLRDVFTQ-----ENIEA 70 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG------GGSCTTSEEEECCTTCHHHHHHHHHH-----SCEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch------hhcCCCcEEEECCCCCHHHHHHHHhh-----cCCCE
Confidence 58999999999999999999999999999998754221 11123688899999999999888764 48999
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC---------
Q 022386 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--------- 163 (298)
Q Consensus 93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~--------- 163 (298)
+||+|+..... .+.++++..+++|+.++..+++++.. .+ .+++|++||...+...
T Consensus 71 vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~--------~~~~v~~Ss~~~~~~~~~~~~~E~~ 134 (330)
T 2c20_A 71 VMHFAADSLVG----VSMEKPLQYYNNNVYGALCLLEVMDE----FK--------VDKFIFSSTAATYGEVDVDLITEET 134 (330)
T ss_dssp EEECCCCCCHH----HHHHSHHHHHHHHHHHHHHHHHHHHH----TT--------CCEEEEECCGGGGCSCSSSSBCTTS
T ss_pred EEECCcccCcc----ccccCHHHHHHHHhHHHHHHHHHHHH----cC--------CCEEEEeCCceeeCCCCCCCCCcCC
Confidence 99999964221 13356788999999999999988653 22 3679999997655321
Q ss_pred --CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC---------ChHHHHHHHhhh-c------
Q 022386 164 --WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL---------APEEIRSKATDY-M------ 225 (298)
Q Consensus 164 --~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~---------~~~~~~~~~~~~-~------ 225 (298)
.+...|+.+|.+.+.+++.++.++ |++++.+.||.+..+...... .-+.+....... .
T Consensus 135 ~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g 210 (330)
T 2c20_A 135 MTNPTNTYGETKLAIEKMLHWYSQAS----NLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFG 210 (330)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHTS----SCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEEC
T ss_pred CCCCCChHHHHHHHHHHHHHHHHHHh----CCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeC
Confidence 235689999999999999998764 699999999999876421110 011111111111 0
Q ss_pred ---------cCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhh
Q 022386 226 ---------AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVE 283 (298)
Q Consensus 226 ---------~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~ 283 (298)
....+...+|+|+++..++........++.+++.+|..++ ...+.+.+.+.+.
T Consensus 211 ~~~~~~~g~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s-----~~e~~~~i~~~~g 272 (330)
T 2c20_A 211 DDYNTPDGTCIRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFS-----VKEIVDAVREVTN 272 (330)
T ss_dssp SCCSSSSSSCEECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCBC-----HHHHHHHHHHHTT
T ss_pred CccccCCCceeEeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCcc-----HHHHHHHHHHHhC
Confidence 0123567899999999888542222236789988776554 3455555554443
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.8e-22 Score=166.96 Aligned_cols=209 Identities=11% Similarity=-0.029 Sum_probs=152.8
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
++++||||+|+||++++++|+++|++|++++|+.+..+. ....+.++.+|++|.++++++++ ++|+
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~ 70 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKI-------ENEHLKVKKADVSSLDEVCEVCK-------GADA 70 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCC-------CCTTEEEECCCTTCHHHHHHHHT-------TCSE
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchh-------ccCceEEEEecCCCHHHHHHHhc-------CCCE
Confidence 689999999999999999999999999999999764321 12568999999999999988875 6999
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC--------
Q 022386 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-------- 164 (298)
Q Consensus 93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~-------- 164 (298)
+||+||.... ....+++|+.++..+++++... + .+++|++||.....+.+
T Consensus 71 vi~~a~~~~~----------~~~~~~~n~~~~~~l~~~~~~~----~--------~~~~v~~Ss~~~~~~~~~~~~~~~~ 128 (227)
T 3dhn_A 71 VISAFNPGWN----------NPDIYDETIKVYLTIIDGVKKA----G--------VNRFLMVGGAGSLFIAPGLRLMDSG 128 (227)
T ss_dssp EEECCCC----------------CCSHHHHHHHHHHHHHHHT----T--------CSEEEEECCSTTSEEETTEEGGGTT
T ss_pred EEEeCcCCCC----------ChhHHHHHHHHHHHHHHHHHHh----C--------CCEEEEeCChhhccCCCCCccccCC
Confidence 9999985321 1126888999998888887542 2 35799999987654332
Q ss_pred --CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHH
Q 022386 165 --YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (298)
Q Consensus 165 --~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 242 (298)
+...|+.+|.+.+.+.+.++.+ .|++++.+.||.+.++................ ......+.+++|+|+++..
T Consensus 129 ~~p~~~Y~~sK~~~e~~~~~~~~~----~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~i~~~Dva~ai~~ 203 (227)
T 3dhn_A 129 EVPENILPGVKALGEFYLNFLMKE----KEIDWVFFSPAADMRPGVRTGRYRLGKDDMIV-DIVGNSHISVEDYAAAMID 203 (227)
T ss_dssp CSCGGGHHHHHHHHHHHHHTGGGC----CSSEEEEEECCSEEESCCCCCCCEEESSBCCC-CTTSCCEEEHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHhhc----cCccEEEEeCCcccCCCccccceeecCCCccc-CCCCCcEEeHHHHHHHHHH
Confidence 3578999999999988887553 37999999999998764332211100000000 0011346789999999999
Q ss_pred hcCCCCCCccccEEEeCCCCCC
Q 022386 243 LASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 243 L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
++..+ ...|+.+++.+....
T Consensus 204 ~l~~~--~~~g~~~~~~~~~~~ 223 (227)
T 3dhn_A 204 ELEHP--KHHQERFTIGYLEHH 223 (227)
T ss_dssp HHHSC--CCCSEEEEEECCSCC
T ss_pred HHhCc--cccCcEEEEEeehhc
Confidence 99764 357999998776543
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.86 E-value=6e-21 Score=167.27 Aligned_cols=225 Identities=15% Similarity=0.103 Sum_probs=163.7
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
+++++||||+|+||.++++.|+++|++|++++|+....+ +. .+.++.+|++ .+++.++++ ++|
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~----~~~~~~~Dl~-~~~~~~~~~-------~~d 64 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-----IN----DYEYRVSDYT-LEDLINQLN-------DVD 64 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------------CCEEEECCCC-HHHHHHHTT-------TCS
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-----CC----ceEEEEcccc-HHHHHHhhc-------CCC
Confidence 378999999999999999999999999999999843322 21 5888999999 888887765 899
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC--------
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-------- 163 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~-------- 163 (298)
++||+|+..... +.+..+++|+.++..+++++... + ..++|++||...+...
T Consensus 65 ~Vih~a~~~~~~--------~~~~~~~~n~~~~~~ll~a~~~~----~--------~~r~v~~SS~~vyg~~~~~~~~E~ 124 (311)
T 3m2p_A 65 AVVHLAATRGSQ--------GKISEFHDNEILTQNLYDACYEN----N--------ISNIVYASTISAYSDETSLPWNEK 124 (311)
T ss_dssp EEEECCCCCCSS--------SCGGGTHHHHHHHHHHHHHHHHT----T--------CCEEEEEEEGGGCCCGGGCSBCTT
T ss_pred EEEEccccCCCC--------ChHHHHHHHHHHHHHHHHHHHHc----C--------CCEEEEEccHHHhCCCCCCCCCCC
Confidence 999999965432 33557889999999998888532 2 3579999996654321
Q ss_pred ---CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhcc---------CCCCC
Q 022386 164 ---WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA---------AYKFG 231 (298)
Q Consensus 164 ---~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~ 231 (298)
.+...|+.+|.+.+.+++.++.+. |++++.+.|+.+..+..........+........+ ...+.
T Consensus 125 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v 200 (311)
T 3m2p_A 125 ELPLPDLMYGVSKLACEHIGNIYSRKK----GLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFL 200 (311)
T ss_dssp SCCCCSSHHHHHHHHHHHHHHHHHHHS----CCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEE
T ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHc----CCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceE
Confidence 134689999999999999998763 69999999999987654322112333333322211 12356
Q ss_pred CHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhhhc
Q 022386 232 EKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERK 285 (298)
Q Consensus 232 ~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~~~ 285 (298)
..+|+|+++..++..+. .|+.+++.+|..++ ...+.+.+.+.+...
T Consensus 201 ~v~Dva~a~~~~~~~~~---~~~~~~i~~~~~~s-----~~e~~~~i~~~~g~~ 246 (311)
T 3m2p_A 201 YAKDAAKSVIYALKQEK---VSGTFNIGSGDALT-----NYEVANTINNAFGNK 246 (311)
T ss_dssp EHHHHHHHHHHHTTCTT---CCEEEEECCSCEEC-----HHHHHHHHHHHTTCT
T ss_pred EHHHHHHHHHHHHhcCC---CCCeEEeCCCCccc-----HHHHHHHHHHHhCCC
Confidence 78899999999997643 68899999887665 455566665555443
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.86 E-value=5.1e-21 Score=169.75 Aligned_cols=233 Identities=15% Similarity=0.045 Sum_probs=164.1
Q ss_pred cEEEEecCCchhHHHHHHHHHHc-CCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCC-HHHHHHHHHHHHHHhCCc
Q 022386 13 KVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK-REDAVRVVESTINHFGKL 90 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~-~~~~~~~~~~~~~~~~~i 90 (298)
++++||||+|+||.+++++|+++ |++|++++|+....+... ...++.++.+|+++ .+.++++++ ++
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~-------~~ 68 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK-------KC 68 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHHH-------HC
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh-----cCCCeEEEeccccCcHHHHHhhcc-------CC
Confidence 47999999999999999999998 899999999875433211 13468899999998 455666654 58
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC------
Q 022386 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW------ 164 (298)
Q Consensus 91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~------ 164 (298)
|++||+||..... ...+++++.+++|+.++.++++++... ++++|++||...+....
T Consensus 69 d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~-------------~~~~v~~SS~~v~g~~~~~~~~e 131 (345)
T 2bll_A 69 DVVLPLVAIATPI----EYTRNPLRVFELDFEENLRIIRYCVKY-------------RKRIIFPSTSEVYGMCSDKYFDE 131 (345)
T ss_dssp SEEEECBCCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHT-------------TCEEEEECCGGGGBTCCCSSBCT
T ss_pred CEEEEcccccCcc----chhcCHHHHHHHHHHHHHHHHHHHHHh-------------CCeEEEEecHHHcCCCCCCCcCC
Confidence 9999999864211 112456788999999999998887542 25699999976542211
Q ss_pred ------------CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC----C----hHHHHHHHhhh
Q 022386 165 ------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL----A----PEEIRSKATDY 224 (298)
Q Consensus 165 ------------~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~----~----~~~~~~~~~~~ 224 (298)
+...|+.+|.+.+.+++.++.+. |++++.+.||.+.++...... . -..+.......
T Consensus 132 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (345)
T 2bll_A 132 DHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE----GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEG 207 (345)
T ss_dssp TTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHT
T ss_pred cccccccCcccCcccccHHHHHHHHHHHHHHHHhc----CCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcC
Confidence 12379999999999999998775 599999999999876532210 0 11222222221
Q ss_pred c---------cCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCC-CCCCCCCCchhHHHhhHHhhh
Q 022386 225 M---------AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN-WLSNPRDLPKEAVNQLSRAVE 283 (298)
Q Consensus 225 ~---------~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~-~~~~~~~~~~~~~~~~~~~~~ 283 (298)
. ....+...+|+|+++.+++.......+|+.+++.+|. .++ ...+.+.+.+.+.
T Consensus 208 ~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~~~~s-----~~e~~~~i~~~~g 271 (345)
T 2bll_A 208 SPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEAS-----IEELGEMLLASFE 271 (345)
T ss_dssp CCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEE-----HHHHHHHHHHHHH
T ss_pred CCcEEECCCCEEEEEEEHHHHHHHHHHHHhhccccCCCceEEeCCCCCCCC-----HHHHHHHHHHHhC
Confidence 1 1124678999999999999765444678999999885 444 3444555544443
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.5e-20 Score=166.48 Aligned_cols=241 Identities=17% Similarity=0.084 Sum_probs=158.7
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHh-CCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
++|||||+|+||++++++|+++|++|++++|......+..+.+.. .+.++.++.+|++|+++++++++. .++|+
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~D~ 76 (338)
T 1udb_A 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHD-----HAIDT 76 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHH-----TTCSE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhc-----cCCCE
Confidence 699999999999999999999999999987643211112222222 144678899999999999888764 26999
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC----------
Q 022386 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA---------- 162 (298)
Q Consensus 93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~---------- 162 (298)
+||+||..... ...++..+.+++|+.++.++++++.. .+ .++||++||...+..
T Consensus 77 vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~--------~~~iv~~SS~~~~g~~~~~~~~e~~ 140 (338)
T 1udb_A 77 VIHFAGLKAVG----ESVQKPLEYYDNNVNGTLRLISAMRA----AN--------VKNFIFSSSATVYGDNPKIPYVESF 140 (338)
T ss_dssp EEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHH----HT--------CCEEEEEEEGGGGCSCCSSSBCTTS
T ss_pred EEECCccCccc----cchhcHHHHHHHHHHHHHHHHHHHHh----cC--------CCeEEEEccHHHhCCCCCCCcCccc
Confidence 99999964211 12244567899999999999886543 22 367999999765421
Q ss_pred -C-CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCccc-----C-----cCChHHHHHHHh-hhc----
Q 022386 163 -T-WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV-----S-----KLAPEEIRSKAT-DYM---- 225 (298)
Q Consensus 163 -~-~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~-----~-----~~~~~~~~~~~~-~~~---- 225 (298)
. +....|+.||.+++.+++.++.+.. ++++..+.|+.+..+... . ......+..... ...
T Consensus 141 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (338)
T 1udb_A 141 PTGTPQSPYGKSKLMVEQILTDLQKAQP---DWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAI 217 (338)
T ss_dssp CCCCCSSHHHHHHHHHHHHHHHHHHHST---TCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEE
T ss_pred CCCCCCChHHHHHHHHHHHHHHHHHhcC---CCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEE
Confidence 1 2256899999999999999988852 689999988776543110 0 000111111111 000
Q ss_pred -----------cCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhh
Q 022386 226 -----------AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVE 283 (298)
Q Consensus 226 -----------~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~ 283 (298)
..+.+...+|+|++++.++........++.+++.+|..++ .+.+.+.+.+.+.
T Consensus 218 ~g~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s-----~~e~~~~i~~~~g 281 (338)
T 1udb_A 218 FGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNS-----VLDVVNAFSKACG 281 (338)
T ss_dssp ECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEE-----HHHHHHHHHHHHT
T ss_pred ecCcccCCCCceeeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCCcee-----HHHHHHHHHHHhC
Confidence 1123567899999998877432111224788887776554 3444455544443
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-20 Score=163.74 Aligned_cols=210 Identities=15% Similarity=0.146 Sum_probs=154.1
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
..+++|||||+|+||+++++.|+++|++|++++|+ .+|++|.++++++++.. ++
T Consensus 11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------------~~Dl~d~~~~~~~~~~~-----~~ 64 (292)
T 1vl0_A 11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ---------------------DLDITNVLAVNKFFNEK-----KP 64 (292)
T ss_dssp -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT---------------------TCCTTCHHHHHHHHHHH-----CC
T ss_pred ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc---------------------cCCCCCHHHHHHHHHhc-----CC
Confidence 35799999999999999999999999999999986 37999999999888754 79
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC------
Q 022386 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW------ 164 (298)
Q Consensus 91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~------ 164 (298)
|++||+||.... +...+++++.+++|+.++.++++++.+. +.+||++||...+.+..
T Consensus 65 d~vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~-------------~~~iv~~SS~~v~~~~~~~~~~E 127 (292)
T 1vl0_A 65 NVVINCAAHTAV----DKCEEQYDLAYKINAIGPKNLAAAAYSV-------------GAEIVQISTDYVFDGEAKEPITE 127 (292)
T ss_dssp SEEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHH-------------TCEEEEEEEGGGSCSCCSSCBCT
T ss_pred CEEEECCccCCH----HHHhcCHHHHHHHHHHHHHHHHHHHHHc-------------CCeEEEechHHeECCCCCCCCCC
Confidence 999999985321 1134667899999999999999998762 13699999976553322
Q ss_pred -----CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhc-------cCCCCCC
Q 022386 165 -----YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM-------AAYKFGE 232 (298)
Q Consensus 165 -----~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 232 (298)
+...|+.+|.+.+.+++.++ .++..+.|+.+..+ . ... ...+........ ....+..
T Consensus 128 ~~~~~~~~~Y~~sK~~~E~~~~~~~--------~~~~~lR~~~v~G~-~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~ 196 (292)
T 1vl0_A 128 FDEVNPQSAYGKTKLEGENFVKALN--------PKYYIVRTAWLYGD-G-NNF-VKTMINLGKTHDELKVVHDQVGTPTS 196 (292)
T ss_dssp TSCCCCCSHHHHHHHHHHHHHHHHC--------SSEEEEEECSEESS-S-SCH-HHHHHHHHHHCSEEEEESSCEECCEE
T ss_pred CCCCCCccHHHHHHHHHHHHHHhhC--------CCeEEEeeeeeeCC-C-cCh-HHHHHHHHhcCCcEEeecCeeeCCcc
Confidence 35689999999999998762 23677888888755 1 111 122222222111 1245678
Q ss_pred HHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhh
Q 022386 233 KWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVE 283 (298)
Q Consensus 233 ~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~ 283 (298)
++|+|+++.+++..+ .|+.+++.+|..++ ...+.+.+.+.+.
T Consensus 197 v~Dva~~~~~~~~~~----~~~~~~i~~~~~~s-----~~e~~~~i~~~~g 238 (292)
T 1vl0_A 197 TVDLARVVLKVIDEK----NYGTFHCTCKGICS-----WYDFAVEIFRLTG 238 (292)
T ss_dssp HHHHHHHHHHHHHHT----CCEEEECCCBSCEE-----HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcC----CCcEEEecCCCCcc-----HHHHHHHHHHHhC
Confidence 999999999999753 68899999886654 3455555555444
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.85 E-value=7.6e-21 Score=163.06 Aligned_cols=194 Identities=11% Similarity=0.065 Sum_probs=146.4
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
.|+++||||+|+||++++++|+++|++|++++|+.... ....+.++.+|++|.+++.++++ ++|
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~---------~~~~~~~~~~Dl~d~~~~~~~~~-------~~d 65 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA---------AEAHEEIVACDLADAQAVHDLVK-------DCD 65 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCC---------CCTTEEECCCCTTCHHHHHHHHT-------TCS
T ss_pred CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccc---------cCCCccEEEccCCCHHHHHHHHc-------CCC
Confidence 37899999999999999999999999999999986421 01347888999999998888775 699
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC-------
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW------- 164 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~------- 164 (298)
++||+||... .+.++..+++|+.++.++++++.+. + .++||++||...+...+
T Consensus 66 ~vi~~a~~~~--------~~~~~~~~~~n~~~~~~l~~a~~~~----~--------~~~iv~~SS~~~~~~~~~~~~~~E 125 (267)
T 3ay3_A 66 GIIHLGGVSV--------ERPWNDILQANIIGAYNLYEAARNL----G--------KPRIVFASSNHTIGYYPRTTRIDT 125 (267)
T ss_dssp EEEECCSCCS--------CCCHHHHHHHTHHHHHHHHHHHHHT----T--------CCEEEEEEEGGGSTTSBTTSCBCT
T ss_pred EEEECCcCCC--------CCCHHHHHHHHHHHHHHHHHHHHHh----C--------CCEEEEeCCHHHhCCCCCCCCCCC
Confidence 9999999641 1345788999999999999988642 2 46899999987654322
Q ss_pred -----CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHH
Q 022386 165 -----YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239 (298)
Q Consensus 165 -----~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (298)
+...|+.+|.+++.+++.++.+ +|++++.+.||.+.... . .... ...+.+++|+|++
T Consensus 126 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~gi~~~~lrp~~v~~~~----~-~~~~---------~~~~~~~~dva~~ 187 (267)
T 3ay3_A 126 EVPRRPDSLYGLSKCFGEDLASLYYHK----FDIETLNIRIGSCFPKP----K-DARM---------MATWLSVDDFMRL 187 (267)
T ss_dssp TSCCCCCSHHHHHHHHHHHHHHHHHHT----TCCCEEEEEECBCSSSC----C-SHHH---------HHHBCCHHHHHHH
T ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHH----cCCCEEEEeceeecCCC----C-CCCe---------eeccccHHHHHHH
Confidence 2468999999999999988654 37999999999985211 0 1110 1236799999999
Q ss_pred HHHhcCCCCCCccccEEEeCCC
Q 022386 240 ALYLASDAGKYVNGNTLIVDGG 261 (298)
Q Consensus 240 ~~~L~s~~~~~~~G~~i~~dgG 261 (298)
+..++..+. ..+..+++.++
T Consensus 188 ~~~~~~~~~--~~~~~~~~~~~ 207 (267)
T 3ay3_A 188 MKRAFVAPK--LGCTVVYGASA 207 (267)
T ss_dssp HHHHHHSSC--CCEEEEEECCS
T ss_pred HHHHHhCCC--CCceeEecCCC
Confidence 999886532 12344555444
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.84 E-value=4.1e-20 Score=153.65 Aligned_cols=203 Identities=11% Similarity=0.015 Sum_probs=131.8
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l 93 (298)
+++||||+|+||+++++.|+++|++|++++|+.+..+... ..+.++.+|++|.++ +.+.++|++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-------~~~~~~~~D~~d~~~---------~~~~~~d~v 65 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-------KDINILQKDIFDLTL---------SDLSDQNVV 65 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-------SSSEEEECCGGGCCH---------HHHTTCSEE
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-------CCCeEEeccccChhh---------hhhcCCCEE
Confidence 6999999999999999999999999999999976544331 458899999999877 233589999
Q ss_pred EECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC---------
Q 022386 94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW--------- 164 (298)
Q Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~--------- 164 (298)
||+||.... ..++|+.++ +.+++.+++.+ .+++|++||..+..+.+
T Consensus 66 i~~ag~~~~-------------~~~~~~~~~----~~l~~a~~~~~--------~~~~v~~SS~~~~~~~~~~~~~~~~~ 120 (221)
T 3ew7_A 66 VDAYGISPD-------------EAEKHVTSL----DHLISVLNGTV--------SPRLLVVGGAASLQIDEDGNTLLESK 120 (221)
T ss_dssp EECCCSSTT-------------TTTSHHHHH----HHHHHHHCSCC--------SSEEEEECCCC---------------
T ss_pred EECCcCCcc-------------ccchHHHHH----HHHHHHHHhcC--------CceEEEEecceEEEcCCCCccccccC
Confidence 999997321 123455554 44555555543 57899999987754432
Q ss_pred ---CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc-CChHHHHHHHhhhccCCCCCCHHHHHHHH
Q 022386 165 ---YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK-LAPEEIRSKATDYMAAYKFGEKWDIAMAA 240 (298)
Q Consensus 165 ---~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 240 (298)
+...|+.+|.+.+.+. .+..+ ..|++++.|.||.+.++..... +... ............+.+++|+|+++
T Consensus 121 ~~~~~~~y~~~k~~~e~~~-~~~~~---~~gi~~~ivrp~~v~g~~~~~~~~~~~--~~~~~~~~~~~~~i~~~Dva~~~ 194 (221)
T 3ew7_A 121 GLREAPYYPTARAQAKQLE-HLKSH---QAEFSWTYISPSAMFEPGERTGDYQIG--KDHLLFGSDGNSFISMEDYAIAV 194 (221)
T ss_dssp ----CCCSCCHHHHHHHHH-HHHTT---TTTSCEEEEECSSCCCCC-----------------------CCCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHH-HHHhh---ccCccEEEEeCcceecCCCccCceEec--cccceecCCCCceEeHHHHHHHH
Confidence 2345999999998873 23221 3489999999999987622111 1000 00000011123478999999999
Q ss_pred HHhcCCCCCCccccEEEeCCCCCCC
Q 022386 241 LYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 241 ~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
+.++..+ ...|+.+++.+.....
T Consensus 195 ~~~l~~~--~~~g~~~~~~~~~~~~ 217 (221)
T 3ew7_A 195 LDEIERP--NHLNEHFTVAGKLEHH 217 (221)
T ss_dssp HHHHHSC--SCTTSEEECCC-----
T ss_pred HHHHhCc--cccCCEEEECCCCccc
Confidence 9999754 3568999987765543
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.84 E-value=2.8e-20 Score=179.12 Aligned_cols=224 Identities=15% Similarity=0.057 Sum_probs=161.3
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHc-CCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHH-HHHHHHHHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRED-AVRVVESTINH 86 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~-~~~~~~~~~~~ 86 (298)
.+++++++||||+|+||.+++++|+++ |++|++++|+....+... ...++.++.+|+++.++ ++++++
T Consensus 312 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~v~~Dl~d~~~~~~~~~~----- 381 (660)
T 1z7e_A 312 ARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK----- 381 (660)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT-----TCTTEEEEECCTTTCHHHHHHHHH-----
T ss_pred hccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc-----cCCceEEEECCCCCcHHHHHHhhc-----
Confidence 467899999999999999999999998 899999999865432211 13468899999998764 555554
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC---
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--- 163 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~--- 163 (298)
++|++||+|+..... ...+++++.+++|+.++.++++++... ++++|++||...+...
T Consensus 382 --~~D~Vih~Aa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~aa~~~-------------~~r~V~~SS~~vyg~~~~~ 442 (660)
T 1z7e_A 382 --KCDVVLPLVAIATPI----EYTRNPLRVFELDFEENLRIIRYCVKY-------------RKRIIFPSTSEVYGMCSDK 442 (660)
T ss_dssp --HCSEEEECCCCCCTH----HHHHSHHHHHHHHTHHHHHHHHHHHHT-------------TCEEEEECCGGGGBTCCSS
T ss_pred --CCCEEEECceecCcc----ccccCHHHHHHhhhHHHHHHHHHHHHh-------------CCEEEEEecHHHcCCCCCc
Confidence 589999999964321 123456789999999999998888642 2569999997654221
Q ss_pred ---------------CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccC--------cCChHHHHHH
Q 022386 164 ---------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS--------KLAPEEIRSK 220 (298)
Q Consensus 164 ---------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~--------~~~~~~~~~~ 220 (298)
.+...|+.||.+.+.+++.++.+. |++++.+.||.+.++.... ......+...
T Consensus 443 ~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~----gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~ 518 (660)
T 1z7e_A 443 YFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE----GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILN 518 (660)
T ss_dssp SBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHH
T ss_pred ccCCCccccccCcccCCCCCcHHHHHHHHHHHHHHHHHc----CCCEEEECCCcccCCCccccccccccccchHHHHHHH
Confidence 122379999999999999998775 5999999999998765321 0011222222
Q ss_pred Hhhhcc---------CCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCC-CCC
Q 022386 221 ATDYMA---------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN-WLS 265 (298)
Q Consensus 221 ~~~~~~---------~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~-~~~ 265 (298)
.....+ ...+.+.+|+|+++.+++........|+.+++++|. .++
T Consensus 519 ~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~~~~s 573 (660)
T 1z7e_A 519 LVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEAS 573 (660)
T ss_dssp HHHTCCEEEEGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGGGEEE
T ss_pred HHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHHhCccccCCCeEEEECCCCCCcC
Confidence 222211 123667999999999999765445679999999885 444
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.9e-20 Score=166.29 Aligned_cols=236 Identities=12% Similarity=0.001 Sum_probs=158.5
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
.+..+++++++|||||+|+||++++++|+++|++|++++|+.....+..+.+. ...++.++.+|+++..
T Consensus 20 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~---------- 88 (343)
T 2b69_A 20 QGHMEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI-GHENFELINHDVVEPL---------- 88 (343)
T ss_dssp -------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT-TCTTEEEEECCTTSCC----------
T ss_pred ccccccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhc-cCCceEEEeCccCChh----------
Confidence 34456788999999999999999999999999999999986432111111111 1346889999998752
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc---
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT--- 161 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~--- 161 (298)
+.++|++||+|+....... .++++..+++|+.++.++++++... +.++|++||...+.
T Consensus 89 --~~~~d~vih~A~~~~~~~~----~~~~~~~~~~n~~~~~~l~~a~~~~-------------~~~~v~~SS~~v~g~~~ 149 (343)
T 2b69_A 89 --YIEVDQIYHLASPASPPNY----MYNPIKTLKTNTIGTLNMLGLAKRV-------------GARLLLASTSEVYGDPE 149 (343)
T ss_dssp --CCCCSEEEECCSCCSHHHH----TTCHHHHHHHHHHHHHHHHHHHHHH-------------TCEEEEEEEGGGGBSCS
T ss_pred --hcCCCEEEECccccCchhh----hhCHHHHHHHHHHHHHHHHHHHHHh-------------CCcEEEECcHHHhCCCC
Confidence 4689999999996432110 1234678899999999999988642 23699999976542
Q ss_pred -------------CCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC--ChHHHHHHHhhhcc
Q 022386 162 -------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL--APEEIRSKATDYMA 226 (298)
Q Consensus 162 -------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~ 226 (298)
+..+...|+.+|.+.+.+++.++.+. |++++.+.||.+.++...... .-..+........+
T Consensus 150 ~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~ 225 (343)
T 2b69_A 150 VHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE----GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEP 225 (343)
T ss_dssp SSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCC
T ss_pred CCCCcccccccCCCCCCCCchHHHHHHHHHHHHHHHHHh----CCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCC
Confidence 22235679999999999999998775 599999999999876432211 11222222222111
Q ss_pred ---------CCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhh
Q 022386 227 ---------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVE 283 (298)
Q Consensus 227 ---------~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~ 283 (298)
...+...+|+|+++..++..+ .++.+++.+|..++ ...+.+.+.+.+.
T Consensus 226 ~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~----~~~~~~i~~~~~~s-----~~e~~~~i~~~~g 282 (343)
T 2b69_A 226 LTVYGSGSQTRAFQYVSDLVNGLVALMNSN----VSSPVNLGNPEEHT-----ILEFAQLIKNLVG 282 (343)
T ss_dssp EEEESSSCCEEECEEHHHHHHHHHHHHTSS----CCSCEEESCCCEEE-----HHHHHHHHHHHHT
T ss_pred ceEcCCCCeEEeeEeHHHHHHHHHHHHhcC----CCCeEEecCCCCCc-----HHHHHHHHHHHhC
Confidence 123668999999999988653 26678888886654 3445555554444
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.6e-20 Score=155.33 Aligned_cols=200 Identities=12% Similarity=0.035 Sum_probs=138.0
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l 93 (298)
+++||||+|+||+++++.|+++|++|++++|+.+...++ ....+.++.+|++|.++ +.+.++|++
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~~~~~~~D~~d~~~---------~~~~~~d~v 66 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR------LGATVATLVKEPLVLTE---------ADLDSVDAV 66 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH------TCTTSEEEECCGGGCCH---------HHHTTCSEE
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccc------cCCCceEEecccccccH---------hhcccCCEE
Confidence 599999999999999999999999999999997654432 23468899999999877 234689999
Q ss_pred EECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC--------
Q 022386 94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-------- 165 (298)
Q Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~-------- 165 (298)
||+||...... ..++|+.++..+++ .+++. ++++|++||..+..+.+.
T Consensus 67 i~~ag~~~~~~-----------~~~~n~~~~~~l~~----a~~~~---------~~~~v~~SS~~~~~~~~~~~~~~~~~ 122 (224)
T 3h2s_A 67 VDALSVPWGSG-----------RGYLHLDFATHLVS----LLRNS---------DTLAVFILGSASLAMPGADHPMILDF 122 (224)
T ss_dssp EECCCCCTTSS-----------CTHHHHHHHHHHHH----TCTTC---------CCEEEEECCGGGSBCTTCSSCGGGGC
T ss_pred EECCccCCCcc-----------hhhHHHHHHHHHHH----HHHHc---------CCcEEEEecceeeccCCCCccccccC
Confidence 99999752110 12456666655444 44443 377999999876544332
Q ss_pred ------chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHH
Q 022386 166 ------QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239 (298)
Q Consensus 166 ------~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (298)
...|+.+|.+.+.+ +.+ .. ..|++++.|.||++.++.....+.... ..+........+.+++|+|++
T Consensus 123 ~~~~~~~~~y~~sK~~~e~~-~~~---~~-~~~i~~~ivrp~~v~g~~~~~~~~~~~--~~~~~~~~~~~~i~~~DvA~~ 195 (224)
T 3h2s_A 123 PESAASQPWYDGALYQYYEY-QFL---QM-NANVNWIGISPSEAFPSGPATSYVAGK--DTLLVGEDGQSHITTGNMALA 195 (224)
T ss_dssp CGGGGGSTTHHHHHHHHHHH-HHH---TT-CTTSCEEEEEECSBCCCCCCCCEEEES--SBCCCCTTSCCBCCHHHHHHH
T ss_pred CCCCccchhhHHHHHHHHHH-HHH---Hh-cCCCcEEEEcCccccCCCcccCceecc--cccccCCCCCceEeHHHHHHH
Confidence 56899999998854 222 12 558999999999998763221110000 000001122457899999999
Q ss_pred HHHhcCCCCCCccccEEEeCCC
Q 022386 240 ALYLASDAGKYVNGNTLIVDGG 261 (298)
Q Consensus 240 ~~~L~s~~~~~~~G~~i~~dgG 261 (298)
++.++..+ ...|+.+++.+-
T Consensus 196 ~~~~l~~~--~~~g~~~~~~~~ 215 (224)
T 3h2s_A 196 ILDQLEHP--TAIRDRIVVRDA 215 (224)
T ss_dssp HHHHHHSC--CCTTSEEEEEEC
T ss_pred HHHHhcCc--cccCCEEEEecC
Confidence 99999764 356888887543
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.83 E-value=5.5e-21 Score=169.29 Aligned_cols=217 Identities=15% Similarity=0.082 Sum_probs=145.3
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHH--HHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSA--VAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~--~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
+|++|||||+|+||.+++++|+++|++|+++.|+.+..... ...+. ...++.++.+|++|.++++++++ .
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~-------~ 80 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-ELGDLKIFRADLTDELSFEAPIA-------G 80 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-GGSCEEEEECCTTTSSSSHHHHT-------T
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-CCCcEEEEecCCCChHHHHHHHc-------C
Confidence 68999999999999999999999999999988875432111 12232 23468889999999888877764 6
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc-----CC-
Q 022386 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-----AT- 163 (298)
Q Consensus 90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~-----~~- 163 (298)
+|++||+|+... .. ..+..++.+++|+.++.++++++.+... .++||++||..+.. +.
T Consensus 81 ~D~Vih~A~~~~---~~--~~~~~~~~~~~nv~gt~~ll~aa~~~~~-----------v~r~V~~SS~~~~~~~~~~~~~ 144 (338)
T 2rh8_A 81 CDFVFHVATPVH---FA--SEDPENDMIKPAIQGVVNVMKACTRAKS-----------VKRVILTSSAAAVTINQLDGTG 144 (338)
T ss_dssp CSEEEEESSCCC---C-----------CHHHHHHHHHHHHHHHHCTT-----------CCEEEEECCHHHHHHHHHTCSC
T ss_pred CCEEEEeCCccC---CC--CCCcHHHHHHHHHHHHHHHHHHHHHcCC-----------cCEEEEEecHHHeecCCcCCCC
Confidence 899999998531 11 1122345899999999999999875431 35799999976321 00
Q ss_pred ---------------C---CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHH-----
Q 022386 164 ---------------W---YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK----- 220 (298)
Q Consensus 164 ---------------~---~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~----- 220 (298)
+ ....|+.||.+.+.+++.++.+. |++++.+.||.+.++........ .....
T Consensus 145 ~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi~~~~lrp~~v~Gp~~~~~~~~-~~~~~~~~~~ 219 (338)
T 2rh8_A 145 LVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEEN----NIDLITVIPTLMAGSSLTSDVPS-SIGLAMSLIT 219 (338)
T ss_dssp CCCCTTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHHH----TCCEEEEEECEEESCCSSSSCCH-HHHHHHHHHH
T ss_pred cccChhhccchhhccccCCccchHHHHHHHHHHHHHHHHHHc----CCcEEEEeCCceECCCCCCCCCc-hHHHHHHHHc
Confidence 0 01159999999999988877653 69999999999998754332221 11000
Q ss_pred -----Hh---h---hccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCC
Q 022386 221 -----AT---D---YMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDG 260 (298)
Q Consensus 221 -----~~---~---~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dg 260 (298)
+. . ......+..++|+|+++++++... ...|. +++.+
T Consensus 220 g~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~--~~~~~-~~~~~ 267 (338)
T 2rh8_A 220 GNEFLINGMKGMQMLSGSVSIAHVEDVCRAHIFVAEKE--SASGR-YICCA 267 (338)
T ss_dssp TCHHHHHHHHHHHHHHSSEEEEEHHHHHHHHHHHHHCT--TCCEE-EEECS
T ss_pred CCccccccccccccccCcccEEEHHHHHHHHHHHHcCC--CcCCc-EEEec
Confidence 00 0 000114789999999999998642 23454 44433
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=4.4e-20 Score=161.29 Aligned_cols=216 Identities=14% Similarity=0.114 Sum_probs=151.8
Q ss_pred EEEEecCCchhHHHHHHHHHHcC-CcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 14 VALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
+++||||+|+||.+++++|+++| ++|++++|+..... ...+.. +. +.+|+++.+.++++++... ++++|+
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~~----~~-~~~d~~~~~~~~~~~~~~~--~~~~d~ 71 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLVD----LN-IADYMDKEDFLIQIMAGEE--FGDVEA 71 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHHT----SC-CSEEEEHHHHHHHHHTTCC--CSSCCE
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcCc----ce-eccccccHHHHHHHHhccc--cCCCcE
Confidence 48999999999999999999999 89999998754321 111221 22 6789999888877765110 236999
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC--------
Q 022386 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-------- 164 (298)
Q Consensus 93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~-------- 164 (298)
+||+|+.... ..+++++.+++|+.++.++++++... + . ++|++||...+....
T Consensus 72 vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~a~~~~----~--------~-~~v~~SS~~v~g~~~~~~~~E~~ 132 (310)
T 1eq2_A 72 IFHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLER----E--------I-PFLYASSAATYGGRTSDFIESRE 132 (310)
T ss_dssp EEECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHHH----T--------C-CEEEEEEGGGGTTCCSCBCSSGG
T ss_pred EEECcccccC------cccCHHHHHHHHHHHHHHHHHHHHHc----C--------C-eEEEEeeHHHhCCCCCCCCCCCC
Confidence 9999996432 12345778999999999999988753 1 2 599999986543221
Q ss_pred ---CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc----CChHHHHHHHhh---------hcc-C
Q 022386 165 ---YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK----LAPEEIRSKATD---------YMA-A 227 (298)
Q Consensus 165 ---~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~----~~~~~~~~~~~~---------~~~-~ 227 (298)
+...|+.+|.+.+.+++.++.+. |++++.+.||.+.++..... ..-..+...... ... .
T Consensus 133 ~~~p~~~Y~~sK~~~e~~~~~~~~~~----g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 208 (310)
T 1eq2_A 133 YEKPLNVYGYSKFLFDEYVRQILPEA----NSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFK 208 (310)
T ss_dssp GCCCSSHHHHHHHHHHHHHHHHGGGC----SSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------C
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHc----CCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcce
Confidence 24579999999999999887653 79999999999987653211 001122211111 112 3
Q ss_pred CCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 228 YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 228 ~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
..+...+|+|+++..++..+. |+.+++.+|..++
T Consensus 209 ~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~s 242 (310)
T 1eq2_A 209 RDFVYVGDVADVNLWFLENGV----SGIFNLGTGRAES 242 (310)
T ss_dssp BCEEEHHHHHHHHHHHHHHCC----CEEEEESCSCCBC
T ss_pred EccEEHHHHHHHHHHHHhcCC----CCeEEEeCCCccC
Confidence 346778999999999986543 7899998887654
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=2.3e-19 Score=173.82 Aligned_cols=254 Identities=14% Similarity=0.044 Sum_probs=163.8
Q ss_pred CCCCCCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHh-CCCCeEEEEccCCCHHHHHHH
Q 022386 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRV 79 (298)
Q Consensus 1 ~~~~~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dls~~~~~~~~ 79 (298)
|.+.| ++++++|++|||||+|+||.+++++|+++|++|++++|+.....+..+.+.. ...++.++.+|+++.++++++
T Consensus 1 m~~~~-~~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~ 79 (699)
T 1z45_A 1 MTAQL-QSESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKV 79 (699)
T ss_dssp -----------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHH
T ss_pred CCccc-ccccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHH
Confidence 33433 3457889999999999999999999999999999999875432222222221 134578899999999999888
Q ss_pred HHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 80 VESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 80 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
++.. ++|++||+|+...... ..+..++.+++|+.++..+++++... + .++||++||...
T Consensus 80 ~~~~-----~~D~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~----~--------~~~iV~~SS~~v 138 (699)
T 1z45_A 80 FKEY-----KIDSVIHFAGLKAVGE----STQIPLRYYHNNILGTVVLLELMQQY----N--------VSKFVFSSSATV 138 (699)
T ss_dssp HHHS-----CCCEEEECCSCCCHHH----HHHSHHHHHHHHHHHHHHHHHHHHHH----T--------CCEEEEEEEGGG
T ss_pred HHhC-----CCCEEEECCcccCcCc----cccCHHHHHHHHHHHHHHHHHHHHHc----C--------CCEEEEECcHHH
Confidence 7642 7999999999643211 12334568999999999998766532 2 367999999765
Q ss_pred ccC---------------CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC----------h
Q 022386 160 YTA---------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA----------P 214 (298)
Q Consensus 160 ~~~---------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~----------~ 214 (298)
+.. ..+...|+.+|.+++.+++.++.+. ..++++..+.|+.+..+....... -
T Consensus 139 yg~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~ 216 (699)
T 1z45_A 139 YGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSD--KKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLL 216 (699)
T ss_dssp GCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS--TTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHH
T ss_pred hCCCccccccCCccccCCCCCCChHHHHHHHHHHHHHHHHHhc--cCCCcEEEEEeccccCCCcccccccccccchhHHH
Confidence 421 1124689999999999999998875 247999999998887542111000 0
Q ss_pred HHHHHHHhh---hcc-------------CCCCCCHHHHHHHHHHhcCCC----CCCccccEEEeCCCCCCCCCCCCchhH
Q 022386 215 EEIRSKATD---YMA-------------AYKFGEKWDIAMAALYLASDA----GKYVNGNTLIVDGGNWLSNPRDLPKEA 274 (298)
Q Consensus 215 ~~~~~~~~~---~~~-------------~~~~~~~~dva~~~~~L~s~~----~~~~~G~~i~~dgG~~~~~~~~~~~~~ 274 (298)
..+...... ... ...+...+|+|++++.++... .....|+.+++.+|..++ .+.+
T Consensus 217 ~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s-----~~el 291 (699)
T 1z45_A 217 PYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGST-----VFEV 291 (699)
T ss_dssp HHHHHHHTTSSSCCCCC------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEE-----HHHH
T ss_pred HHHHHHHhcCCCceEEeCCcccCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCc-----HHHH
Confidence 111111111 011 113456889999998877421 112236789998876554 3444
Q ss_pred HHhhHHhhh
Q 022386 275 VNQLSRAVE 283 (298)
Q Consensus 275 ~~~~~~~~~ 283 (298)
.+.+.+.+.
T Consensus 292 ~~~i~~~~g 300 (699)
T 1z45_A 292 YHAFCKASG 300 (699)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhC
Confidence 555544443
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.9e-19 Score=157.53 Aligned_cols=215 Identities=12% Similarity=-0.036 Sum_probs=154.5
Q ss_pred CcEEEEecCCchhHHHHHHHHHHc--CCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKH--GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
+|+++||||+|+||.+++++|+++ |++|++++|+....+ +. .++.++.+|++|.+++++++++. +
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~---~~~~~~~~D~~d~~~~~~~~~~~-----~ 68 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-----VV---NSGPFEVVNALDFNQIEHLVEVH-----K 68 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-----HH---HSSCEEECCTTCHHHHHHHHHHT-----T
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-----cc---CCCceEEecCCCHHHHHHHHhhc-----C
Confidence 478999999999999999999999 899999999865421 11 13678899999999998887643 7
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC------
Q 022386 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT------ 163 (298)
Q Consensus 90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~------ 163 (298)
+|++||+|+.... ...+++++.+++|+.++.++++++.+ .+ .+++|++||...+...
T Consensus 69 ~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~--------~~~~v~~SS~~~~~~~~~~~~~ 131 (312)
T 2yy7_A 69 ITDIYLMAALLSA-----TAEKNPAFAWDLNMNSLFHVLNLAKA----KK--------IKKIFWPSSIAVFGPTTPKENT 131 (312)
T ss_dssp CCEEEECCCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHHHT----TS--------CSEEECCEEGGGCCTTSCSSSB
T ss_pred CCEEEECCccCCC-----chhhChHHHHHHHHHHHHHHHHHHHH----cC--------CCEEEEeccHHHhCCCCCCCCc
Confidence 9999999985321 11355778899999999999998864 22 3579999998665331
Q ss_pred ------CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC-----hHHHHHHHhhhc-------
Q 022386 164 ------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYM------- 225 (298)
Q Consensus 164 ------~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~-----~~~~~~~~~~~~------- 225 (298)
.+...|+.+|.+.+.+++.++.+. |++++.+.|+.+..+....... ...+........
T Consensus 132 ~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (312)
T 2yy7_A 132 PQYTIMEPSTVYGISKQAGERWCEYYHNIY----GVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSS 207 (312)
T ss_dssp CSSCBCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCT
T ss_pred cccCcCCCCchhHHHHHHHHHHHHHHHHhc----CCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCC
Confidence 125689999999999999998775 5999999999998753221111 111111121111
Q ss_pred -cCCCCCCHHHHHHHHHHhcCCCCCCc-cccEEEeCC
Q 022386 226 -AAYKFGEKWDIAMAALYLASDAGKYV-NGNTLIVDG 260 (298)
Q Consensus 226 -~~~~~~~~~dva~~~~~L~s~~~~~~-~G~~i~~dg 260 (298)
....+...+|+|+++..++..+.... .|+.+++.+
T Consensus 208 ~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~ 244 (312)
T 2yy7_A 208 ETKMPMMYMDDAIDATINIMKAPVEKIKIHSSYNLAA 244 (312)
T ss_dssp TCCEEEEEHHHHHHHHHHHHHSCGGGCCCSSCEECCS
T ss_pred CceeeeeeHHHHHHHHHHHHhCcccccccCceEEeCC
Confidence 11234577999999999886543222 257888864
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.3e-19 Score=155.45 Aligned_cols=209 Identities=16% Similarity=0.102 Sum_probs=147.4
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l 93 (298)
+++||||+|+||++++++|++ |++|++++|+.+. + .+ +.+|++|.++++++++.. ++|++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~-~--------~~-----~~~Dl~~~~~~~~~~~~~-----~~d~v 61 (273)
T 2ggs_A 2 RTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEI-Q--------GG-----YKLDLTDFPRLEDFIIKK-----RPDVI 61 (273)
T ss_dssp CEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCC-T--------TC-----EECCTTSHHHHHHHHHHH-----CCSEE
T ss_pred EEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcC-C--------CC-----ceeccCCHHHHHHHHHhc-----CCCEE
Confidence 699999999999999999994 8999999998641 0 11 789999999999988764 79999
Q ss_pred EECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC---------
Q 022386 94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW--------- 164 (298)
Q Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~--------- 164 (298)
|||||.... ....+++++.+++|+.++.++++++.+ . +++||++||...+.+.+
T Consensus 62 i~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~---------~~~iv~~SS~~~~~~~~~~~~e~~~~ 124 (273)
T 2ggs_A 62 INAAAMTDV----DKCEIEKEKAYKINAEAVRHIVRAGKV----I---------DSYIVHISTDYVFDGEKGNYKEEDIP 124 (273)
T ss_dssp EECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHH----T---------TCEEEEEEEGGGSCSSSCSBCTTSCC
T ss_pred EECCcccCh----hhhhhCHHHHHHHhHHHHHHHHHHHHH----h---------CCeEEEEecceeEcCCCCCcCCCCCC
Confidence 999996432 123467889999999999999999864 2 35799999988764432
Q ss_pred -CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhcc------CCCCCCHHHHH
Q 022386 165 -YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA------AYKFGEKWDIA 237 (298)
Q Consensus 165 -~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dva 237 (298)
+...|+.+|.+++.+++. +. . ..|.|+.+..+ .. .............+ ...+.+++|+|
T Consensus 125 ~~~~~Y~~sK~~~e~~~~~----~~-~-----~~iR~~~v~G~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva 190 (273)
T 2ggs_A 125 NPINYYGLSKLLGETFALQ----DD-S-----LIIRTSGIFRN---KG-FPIYVYKTLKEGKTVFAFKGYYSPISARKLA 190 (273)
T ss_dssp CCSSHHHHHHHHHHHHHCC----TT-C-----EEEEECCCBSS---SS-HHHHHHHHHHTTCCEEEESCEECCCBHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhC----CC-e-----EEEeccccccc---cH-HHHHHHHHHHcCCCEEeecCCCCceEHHHHH
Confidence 256899999999999887 22 2 33445544421 10 11122122222111 34688999999
Q ss_pred HHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhh
Q 022386 238 MAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVE 283 (298)
Q Consensus 238 ~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~ 283 (298)
+++.+++.... +| .+++++ ..++ .+.+.+.+.+.+.
T Consensus 191 ~~i~~~~~~~~---~g-~~~i~~-~~~s-----~~e~~~~~~~~~g 226 (273)
T 2ggs_A 191 SAILELLELRK---TG-IIHVAG-ERIS-----RFELALKIKEKFN 226 (273)
T ss_dssp HHHHHHHHHTC---CE-EEECCC-CCEE-----HHHHHHHHHHHTT
T ss_pred HHHHHHHhcCc---CC-eEEECC-Cccc-----HHHHHHHHHHHhC
Confidence 99999997542 45 788887 5554 3445555554444
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=3.3e-19 Score=156.67 Aligned_cols=224 Identities=14% Similarity=0.064 Sum_probs=159.1
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.+++++||||+|+||.+++++|+++|++|+++.|+. .+|++|.++++++++.. ++
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~--------------------~~D~~d~~~~~~~~~~~-----~~ 56 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------------ELNLLDSRAVHDFFASE-----RI 56 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------------TCCTTCHHHHHHHHHHH-----CC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc--------------------cCCccCHHHHHHHHHhc-----CC
Confidence 468999999999999999999999999999988762 26999999998888754 79
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC--------
Q 022386 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-------- 162 (298)
Q Consensus 91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~-------- 162 (298)
|++||+|+..... ....++.++.+++|+.++..+++++... + .+++|++||...+..
T Consensus 57 d~vih~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~--------~~~~v~~SS~~vyg~~~~~~~~E 121 (321)
T 1e6u_A 57 DQVYLAAAKVGGI---VANNTYPADFIYQNMMIESNIIHAAHQN----D--------VNKLLFLGSSCIYPKLAKQPMAE 121 (321)
T ss_dssp SEEEECCCCCCCH---HHHHHCHHHHHHHHHHHHHHHHHHHHHT----T--------CCEEEEECCGGGSCTTCCSSBCG
T ss_pred CEEEEcCeecCCc---chhhhCHHHHHHHHHHHHHHHHHHHHHh----C--------CCeEEEEccHHHcCCCCCCCcCc
Confidence 9999999853210 1123456788999999999999988652 2 357999999766522
Q ss_pred --------CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc----CChHHHHHHHhh-------
Q 022386 163 --------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK----LAPEEIRSKATD------- 223 (298)
Q Consensus 163 --------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~----~~~~~~~~~~~~------- 223 (298)
.+....|+.+|.+.+.+++.++.+. |++++.+.||.+..+..... ..-..+...+..
T Consensus 122 ~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 197 (321)
T 1e6u_A 122 SELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY----GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAP 197 (321)
T ss_dssp GGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCS
T ss_pred cccccCCCCCCCCccHHHHHHHHHHHHHHHHHh----CCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCC
Confidence 1113589999999999999998775 59999999999987644321 111222222211
Q ss_pred hc-------cCCCCCCHHHHHHHHHHhcCCCCC------CccccEEEeCCCCCCCCCCCCchhHHHhhHHhhh
Q 022386 224 YM-------AAYKFGEKWDIAMAALYLASDAGK------YVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVE 283 (298)
Q Consensus 224 ~~-------~~~~~~~~~dva~~~~~L~s~~~~------~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~ 283 (298)
.. ....+...+|+|+++..++..... ...|+.+++.+|..++ ...+.+.+.+.+.
T Consensus 198 ~~~~~~~g~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s-----~~e~~~~i~~~~g 265 (321)
T 1e6u_A 198 DVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCT-----IRELAQTIAKVVG 265 (321)
T ss_dssp EEEEESCSCCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEE-----HHHHHHHHHHHHT
T ss_pred ceEEcCCCCEEEEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCCcc-----HHHHHHHHHHHhC
Confidence 11 112355889999999998865321 1236889998776554 3455555554443
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.82 E-value=4.6e-19 Score=164.35 Aligned_cols=226 Identities=16% Similarity=0.026 Sum_probs=156.6
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHc---CCcEEEEcCChhHHHHHHHHHH---------------hCCCCeEEEEc
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKH---GAAIAIMGRRKTVLRSAVAALH---------------SLGIPAIGLEG 68 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~---G~~Vv~~~r~~~~~~~~~~~~~---------------~~~~~~~~~~~ 68 (298)
....++|+|+||||+|+||.+++++|+++ |++|++++|+.+.......... ....++.++.+
T Consensus 68 ~~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~ 147 (478)
T 4dqv_A 68 GPSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAG 147 (478)
T ss_dssp CCCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEEC
T ss_pred CCCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEe
Confidence 34577899999999999999999999999 9999999998654322221111 12357999999
Q ss_pred cCC------CHHHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCC
Q 022386 69 DVR------KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ 142 (298)
Q Consensus 69 Dls------~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ 142 (298)
|++ +.++++++++ ++|++||+|+.... +.+++.+++|+.++.++++++.. .+
T Consensus 148 Dl~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~--------~~~~~~~~~Nv~gt~~ll~aa~~----~~--- 205 (478)
T 4dqv_A 148 DKSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA--------FPYHELFGPNVAGTAELIRIALT----TK--- 205 (478)
T ss_dssp CTTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB--------SSCCEEHHHHHHHHHHHHHHHTS----SS---
T ss_pred ECCCcccCCCHHHHHHHHc-------CCCEEEECccccCC--------cCHHHHHHHHHHHHHHHHHHHHh----CC---
Confidence 999 6666776665 58999999997533 22346788999999999988763 21
Q ss_pred CCCCCCcEEEEecccccccCCCC----------------------chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeC
Q 022386 143 ASSSSGGIIINISATLHYTATWY----------------------QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP 200 (298)
Q Consensus 143 ~~~~~~g~iv~vss~~~~~~~~~----------------------~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~P 200 (298)
..+||++||...+..... ...|+.||.+.+.+++.++.+. |++++.+.|
T Consensus 206 -----~~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gi~~~ivRp 276 (478)
T 4dqv_A 206 -----LKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC----ALPVAVFRC 276 (478)
T ss_dssp -----CCCEEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH----CCCEEEEEE
T ss_pred -----CCeEEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh----CCCeEEEEC
Confidence 246999999654332110 1339999999999999998875 599999999
Q ss_pred CcccCCcccC-cCChHHHHHHH----hh--hcc---------------CCCCCCHHHHHHHHHHhcCCC--CCCccccEE
Q 022386 201 GPIKDTAGVS-KLAPEEIRSKA----TD--YMA---------------AYKFGEKWDIAMAALYLASDA--GKYVNGNTL 256 (298)
Q Consensus 201 G~v~t~~~~~-~~~~~~~~~~~----~~--~~~---------------~~~~~~~~dva~~~~~L~s~~--~~~~~G~~i 256 (298)
|.|..+.... .....++...+ .. ..| ...+...+|+|++++.++... ...-.|+++
T Consensus 277 g~v~G~~~~~g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~y 356 (478)
T 4dqv_A 277 GMILADTSYAGQLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATY 356 (478)
T ss_dssp CEEECCSSSSSCCCTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEE
T ss_pred ceeeCCCccCCcCCHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceE
Confidence 9998653211 11111222111 11 111 123468889999999887531 122457899
Q ss_pred EeCCCCC
Q 022386 257 IVDGGNW 263 (298)
Q Consensus 257 ~~dgG~~ 263 (298)
++.++..
T Consensus 357 nv~~~~~ 363 (478)
T 4dqv_A 357 HVMNPHD 363 (478)
T ss_dssp EESCCCC
T ss_pred EecCCCC
Confidence 9977754
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=3.6e-21 Score=159.50 Aligned_cols=198 Identities=15% Similarity=0.073 Sum_probs=145.2
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCC--cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
.+|+++||||+|+||++++++|+++|+ +|++++|+... ...++.++.+|+++.+++++++
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~~~~~~~~~~D~~~~~~~~~~~-------- 65 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------EHPRLDNPVGPLAELLPQLDGS-------- 65 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------CCTTEECCBSCHHHHGGGCCSC--------
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------cCCCceEEeccccCHHHHHHhh--------
Confidence 468999999999999999999999998 99999998653 1346888899999887666543
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchh
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~ 168 (298)
+|++||+||.... +.+++++.+++|+.++..+++++.+. + .+++|++||...+.. +...
T Consensus 66 -~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~--------~~~~v~~Ss~~~~~~--~~~~ 124 (215)
T 2a35_A 66 -IDTAFCCLGTTIK------EAGSEEAFRAVDFDLPLAVGKRALEM----G--------ARHYLVVSALGADAK--SSIF 124 (215)
T ss_dssp -CSEEEECCCCCHH------HHSSHHHHHHHHTHHHHHHHHHHHHT----T--------CCEEEEECCTTCCTT--CSSH
T ss_pred -hcEEEECeeeccc------cCCCHHHHHHhhHHHHHHHHHHHHHc----C--------CCEEEEECCcccCCC--CccH
Confidence 8999999995321 23457788999999999999887542 2 367999999877643 3458
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeE-EEEEeCCcccCCcccCcCChHHHHHHHhhhcc----CCCCCCHHHHHHHHHHh
Q 022386 169 VSAAKAAVDSITRSLALEWGTDYAIR-VNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA----AYKFGEKWDIAMAALYL 243 (298)
Q Consensus 169 Y~~sK~a~~~l~~~la~e~~~~~gir-v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~dva~~~~~L 243 (298)
|+.+|.+++.+++. .|++ ++.+.||++.++....... +... ....+ ...+.+++|+|+++..+
T Consensus 125 y~~sK~~~e~~~~~--------~~~~~~~~vrp~~v~g~~~~~~~~-~~~~---~~~~~~~~~~~~~i~~~Dva~~~~~~ 192 (215)
T 2a35_A 125 YNRVKGELEQALQE--------QGWPQLTIARPSLLFGPREEFRLA-EILA---APIARILPGKYHGIEACDLARALWRL 192 (215)
T ss_dssp HHHHHHHHHHHHTT--------SCCSEEEEEECCSEESTTSCEEGG-GGTT---CCCC----CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH--------cCCCeEEEEeCceeeCCCCcchHH-HHHH---HhhhhccCCCcCcEeHHHHHHHHHHH
Confidence 99999999988763 3798 9999999998764321110 0000 00000 11245788999999999
Q ss_pred cCCCCCCccccEEEeCCCCC
Q 022386 244 ASDAGKYVNGNTLIVDGGNW 263 (298)
Q Consensus 244 ~s~~~~~~~G~~i~~dgG~~ 263 (298)
+..+. +..+++.++..
T Consensus 193 ~~~~~----~~~~~i~~~~~ 208 (215)
T 2a35_A 193 ALEEG----KGVRFVESDEL 208 (215)
T ss_dssp HTCCC----SEEEEEEHHHH
T ss_pred HhcCC----CCceEEcHHHH
Confidence 97643 66777766643
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.81 E-value=6.3e-19 Score=152.43 Aligned_cols=213 Identities=15% Similarity=0.061 Sum_probs=150.4
Q ss_pred cEEEEecCCchhHHHHHHHHHHc--CCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 13 KVALLTGGGSGIGFEISLQLGKH--GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
|+++||||+|+||++++++|+++ |++|++++|+.+..+.+. . ..+.++.+|++|.++++++++ ++
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~----~--~~~~~~~~D~~d~~~l~~~~~-------~~ 67 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA----D--QGVEVRHGDYNQPESLQKAFA-------GV 67 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH----H--TTCEEEECCTTCHHHHHHHTT-------TC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh----h--cCCeEEEeccCCHHHHHHHHh-------cC
Confidence 47999999999999999999999 999999999876544322 2 347889999999998887765 68
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhH
Q 022386 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVS 170 (298)
Q Consensus 91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~ 170 (298)
|++||+|+... . + ++|+.++.++++++.. .+ .++||++||..... ....|+
T Consensus 68 d~vi~~a~~~~-------~-~------~~n~~~~~~l~~a~~~----~~--------~~~~v~~Ss~~~~~---~~~~y~ 118 (287)
T 2jl1_A 68 SKLLFISGPHY-------D-N------TLLIVQHANVVKAARD----AG--------VKHIAYTGYAFAEE---SIIPLA 118 (287)
T ss_dssp SEEEECCCCCS-------C-H------HHHHHHHHHHHHHHHH----TT--------CSEEEEEEETTGGG---CCSTHH
T ss_pred CEEEEcCCCCc-------C-c------hHHHHHHHHHHHHHHH----cC--------CCEEEEECCCCCCC---CCCchH
Confidence 99999998521 1 1 5788888888887743 22 35799999976642 224799
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHH---hhhccCCCCCCHHHHHHHHHHhcCCC
Q 022386 171 AAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA---TDYMAAYKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 171 ~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~dva~~~~~L~s~~ 247 (298)
.+|.+.+.+++. .|++++.+.||++.++...... ........ ........+.+++|+|+++..++..+
T Consensus 119 ~~K~~~E~~~~~--------~~~~~~ilrp~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~ 189 (287)
T 2jl1_A 119 HVHLATEYAIRT--------TNIPYTFLRNALYTDFFVNEGL-RASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEE 189 (287)
T ss_dssp HHHHHHHHHHHH--------TTCCEEEEEECCBHHHHSSGGG-HHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHH--------cCCCeEEEECCEeccccchhhH-HHHhhCCceeccCCCCccCccCHHHHHHHHHHHhcCC
Confidence 999999988752 2799999999988654211111 11110100 00112235789999999999999753
Q ss_pred CCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhh
Q 022386 248 GKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVE 283 (298)
Q Consensus 248 ~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~ 283 (298)
. .+|+.+++.+|..++ .+.+.+.+.+.+.
T Consensus 190 ~--~~g~~~~i~~~~~~s-----~~e~~~~i~~~~g 218 (287)
T 2jl1_A 190 G--HENKTYNLVSNQPWT-----FDELAQILSEVSG 218 (287)
T ss_dssp S--CTTEEEEECCSSCBC-----HHHHHHHHHHHHS
T ss_pred C--CCCcEEEecCCCcCC-----HHHHHHHHHHHHC
Confidence 2 478999999986664 3444555544443
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.4e-19 Score=156.54 Aligned_cols=210 Identities=13% Similarity=0.047 Sum_probs=153.1
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
++++||||+|+||.++++.|+++|++|++++|. .+|++|.++++++++.. ++|+
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------------~~D~~d~~~~~~~~~~~-----~~d~ 59 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK---------------------LLDITNISQVQQVVQEI-----RPHI 59 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT---------------------TSCTTCHHHHHHHHHHH-----CCSE
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc---------------------ccCCCCHHHHHHHHHhc-----CCCE
Confidence 389999999999999999999999999999992 37999999999988765 7999
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC---------
Q 022386 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--------- 163 (298)
Q Consensus 93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~--------- 163 (298)
+||+|+..... ...++++..+++|+.++.++++++... +.++|++||...+.+.
T Consensus 60 vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~-------------~~~~v~~SS~~vy~~~~~~~~~E~~ 122 (287)
T 3sc6_A 60 IIHCAAYTKVD----QAEKERDLAYVINAIGARNVAVASQLV-------------GAKLVYISTDYVFQGDRPEGYDEFH 122 (287)
T ss_dssp EEECCCCCCHH----HHTTCHHHHHHHHTHHHHHHHHHHHHH-------------TCEEEEEEEGGGSCCCCSSCBCTTS
T ss_pred EEECCcccChH----HHhcCHHHHHHHHHHHHHHHHHHHHHc-------------CCeEEEEchhhhcCCCCCCCCCCCC
Confidence 99999964321 111456788999999999999988643 2469999998655332
Q ss_pred --CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhcc-------CCCCCCHH
Q 022386 164 --WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA-------AYKFGEKW 234 (298)
Q Consensus 164 --~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ 234 (298)
.+...|+.+|.+.+.+++.++ .+++.+.|+.+..+..... ...+........+ ...+..++
T Consensus 123 ~~~p~~~Y~~sK~~~E~~~~~~~--------~~~~ilR~~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 192 (287)
T 3sc6_A 123 NPAPINIYGASKYAGEQFVKELH--------NKYFIVRTSWLYGKYGNNF--VKTMIRLGKEREEISVVADQIGSPTYVA 192 (287)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHC--------SSEEEEEECSEECSSSCCH--HHHHHHHHTTCSEEEEECSCEECCEEHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHhC--------CCcEEEeeeeecCCCCCcH--HHHHHHHHHcCCCeEeecCcccCceEHH
Confidence 235689999999999988762 2457899999976532211 1222222222111 13456699
Q ss_pred HHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhhh
Q 022386 235 DIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVER 284 (298)
Q Consensus 235 dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~~ 284 (298)
|+|+++.+++..+. +..+++.+|..++ ...+.+.+.+.+..
T Consensus 193 Dva~~~~~~~~~~~----~~~~~i~~~~~~s-----~~e~~~~i~~~~g~ 233 (287)
T 3sc6_A 193 DLNVMINKLIHTSL----YGTYHVSNTGSCS-----WFEFAKKIFSYANM 233 (287)
T ss_dssp HHHHHHHHHHTSCC----CEEEECCCBSCEE-----HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhCCC----CCeEEEcCCCccc-----HHHHHHHHHHHcCC
Confidence 99999999997643 5689998887654 45555666555543
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.5e-20 Score=163.58 Aligned_cols=215 Identities=11% Similarity=-0.021 Sum_probs=145.0
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHh--CCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS--LGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
++.++++|||||+|+||.+++++|+++|++|++++|+........+.+.. ....+.++.+|++
T Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~--------------- 68 (321)
T 3vps_A 4 NTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS--------------- 68 (321)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT---------------
T ss_pred ccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc---------------
Confidence 45679999999999999999999999999999999975410000000111 0123445555555
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC---
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--- 163 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~--- 163 (298)
++|++||+|+........ +.....++ |+.++.++++++...- -.++|++||...+...
T Consensus 69 --~~d~vi~~a~~~~~~~~~----~~~~~~~~-n~~~~~~ll~a~~~~~------------v~~~v~~SS~~v~~~~~~~ 129 (321)
T 3vps_A 69 --DVRLVYHLASHKSVPRSF----KQPLDYLD-NVDSGRHLLALCTSVG------------VPKVVVGSTCEVYGQADTL 129 (321)
T ss_dssp --TEEEEEECCCCCCHHHHT----TSTTTTHH-HHHHHHHHHHHHHHHT------------CCEEEEEEEGGGGCSCSSS
T ss_pred --cCCEEEECCccCChHHHH----hCHHHHHH-HHHHHHHHHHHHHHcC------------CCeEEEecCHHHhCCCCCC
Confidence 799999999864321111 11223456 9999999998886542 2569999997655332
Q ss_pred --------CCchhhHHHHHHHHHHHHHHHHHhcCCCCe-EEEEEeCCcccCCcccCcCChHHHHHHHhhhcc--------
Q 022386 164 --------WYQIHVSAAKAAVDSITRSLALEWGTDYAI-RVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA-------- 226 (298)
Q Consensus 164 --------~~~~~Y~~sK~a~~~l~~~la~e~~~~~gi-rv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~-------- 226 (298)
.+...|+.+|.+.+.+++.++.+. |+ +++.+.|+.+..+..........+........+
T Consensus 130 ~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (321)
T 3vps_A 130 PTPEDSPLSPRSPYAASKVGLEMVAGAHQRAS----VAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGE 205 (321)
T ss_dssp SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHSS----SSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSC
T ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc----CCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCC
Confidence 124689999999999999998764 68 999999999987654332222333333322211
Q ss_pred -CCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 227 -AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 227 -~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
...+.+.+|+|+++.+++..... | .+++.+|..++
T Consensus 206 ~~~~~v~v~Dva~~~~~~~~~~~~---g-~~~i~~~~~~s 241 (321)
T 3vps_A 206 QRRDFTYITDVVDKLVALANRPLP---S-VVNFGSGQSLS 241 (321)
T ss_dssp CEECEEEHHHHHHHHHHGGGSCCC---S-EEEESCSCCEE
T ss_pred ceEceEEHHHHHHHHHHHHhcCCC---C-eEEecCCCccc
Confidence 12356899999999999976543 7 99999887664
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=4e-19 Score=154.58 Aligned_cols=215 Identities=12% Similarity=0.026 Sum_probs=152.5
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l 93 (298)
+++||||+|+||.+++++|+ +|++|++++|+.. ++.+|++|.++++++++.. ++|++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-----------------~~~~D~~d~~~~~~~~~~~-----~~d~v 58 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-----------------EFCGDFSNPKGVAETVRKL-----RPDVI 58 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-----------------SSCCCTTCHHHHHHHHHHH-----CCSEE
T ss_pred eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-----------------cccccCCCHHHHHHHHHhc-----CCCEE
Confidence 69999999999999999999 8999999999751 3578999999998888753 69999
Q ss_pred EECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC---------
Q 022386 94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW--------- 164 (298)
Q Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~--------- 164 (298)
||+|+..... ...+++++.+++|+.++.++++++.. . +.++|++||...+.+..
T Consensus 59 ih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~----~---------~~~~v~~SS~~vy~~~~~~~~~E~~~ 121 (299)
T 1n2s_A 59 VNAAAHTAVD----KAESEPELAQLLNATSVEAIAKAANE----T---------GAWVVHYSTDYVFPGTGDIPWQETDA 121 (299)
T ss_dssp EECCCCCCHH----HHTTCHHHHHHHHTHHHHHHHHHHTT----T---------TCEEEEEEEGGGSCCCTTCCBCTTSC
T ss_pred EECcccCCHh----hhhcCHHHHHHHHHHHHHHHHHHHHH----c---------CCcEEEEecccEEeCCCCCCCCCCCC
Confidence 9999853211 01234677899999999999998742 1 24699999986543321
Q ss_pred --CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccC-------CCCCCHHH
Q 022386 165 --YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA-------YKFGEKWD 235 (298)
Q Consensus 165 --~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~d 235 (298)
+...|+.+|.+.+.+++.+ . .+++.+.|+.+.++.... ....+........+. ..+...+|
T Consensus 122 ~~p~~~Y~~sK~~~E~~~~~~----~----~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 191 (299)
T 1n2s_A 122 TSPLNVYGKTKLAGEKALQDN----C----PKHLIFRTSWVYAGKGNN--FAKTMLRLAKERQTLSVINDQYGAPTGAEL 191 (299)
T ss_dssp CCCSSHHHHHHHHHHHHHHHH----C----SSEEEEEECSEECSSSCC--HHHHHHHHHHHCSEEEEECSCEECCEEHHH
T ss_pred CCCccHHHHHHHHHHHHHHHh----C----CCeEEEeeeeecCCCcCc--HHHHHHHHHhcCCCEEeecCcccCCeeHHH
Confidence 2468999999999998865 2 278899999998764321 112222222222111 33556999
Q ss_pred HHHHHHHhcCCCCCCc-cccEEEeCCCCCCCCCCCCchhHHHhhHHhhh
Q 022386 236 IAMAALYLASDAGKYV-NGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVE 283 (298)
Q Consensus 236 va~~~~~L~s~~~~~~-~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~ 283 (298)
+++++.+++....... .|+.+++.+|..++ ...+.+.+.+.+.
T Consensus 192 va~~~~~~~~~~~~~~~~~~~~~i~~~~~~s-----~~e~~~~i~~~~g 235 (299)
T 1n2s_A 192 LADCTAHAIRVALNKPEVAGLYHLVAGGTTT-----WHDYAALVFDEAR 235 (299)
T ss_dssp HHHHHHHHHHHHHHCGGGCEEEECCCBSCEE-----HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccCceEEEeCCCCCC-----HHHHHHHHHHHhC
Confidence 9999999986532122 57899999887654 3444454444443
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.80 E-value=7.9e-19 Score=164.02 Aligned_cols=218 Identities=14% Similarity=0.014 Sum_probs=155.6
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhH---HHHHHHHHHh---------CCCCeEEEEccCCCHHHHHHH
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV---LRSAVAALHS---------LGIPAIGLEGDVRKREDAVRV 79 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~---~~~~~~~~~~---------~~~~~~~~~~Dls~~~~~~~~ 79 (298)
.++||||||||+||.+++++|.++|++|+++.|+... .+++.+.+.. ...++.++.+|+++++++.
T Consensus 150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-- 227 (508)
T 4f6l_B 150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-- 227 (508)
T ss_dssp CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC--
T ss_pred CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC--
Confidence 4899999999999999999999999999999998762 3333333322 2467999999999977776
Q ss_pred HHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 80 VESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 80 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
...++|+|||+|+... ....+...+++|+.++.++++++.. . ..++|++||...
T Consensus 228 ------~~~~~D~Vih~Aa~~~-------~~~~~~~~~~~Nv~gt~~ll~~a~~-----~--------~~~~v~iSS~~v 281 (508)
T 4f6l_B 228 ------LPENMDTIIHAGARTD-------HFGDDDEFEKVNVQGTVDVIRLAQQ-----H--------HARLIYVSTISV 281 (508)
T ss_dssp ------CSSCCSEEEECCCC---------------CCHHHHHHHHHHHHHHHHT-----T--------TCEEEEEEESCT
T ss_pred ------CccCCCEEEECCceec-------CCCCHHHHhhhHHHHHHHHHHHHHh-----C--------CCcEEEeCChhh
Confidence 3468999999998642 1235677889999999999998875 1 467999998766
Q ss_pred --ccC----------------CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC----h---
Q 022386 160 --YTA----------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA----P--- 214 (298)
Q Consensus 160 --~~~----------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~----~--- 214 (298)
... ......|+.+|.+.+.+++.++. .|++++.+.||.+..+....... .
T Consensus 282 G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-----~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~ 356 (508)
T 4f6l_B 282 GTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN-----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRF 356 (508)
T ss_dssp TSEECTTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH-----TTCEEEEEEECCEESCSSSCCCCTTCTTCHH
T ss_pred ccCCccCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH-----cCCCEEEEecceeccCCCCCcccCCcchHHH
Confidence 100 11456899999999999998643 27999999999998764433211 1
Q ss_pred HHHHHHHhhh--cc------CCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 215 EEIRSKATDY--MA------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 215 ~~~~~~~~~~--~~------~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
.......... .+ ...+...+|+|+++++++..+. .|+++++.++..++
T Consensus 357 ~~~i~~~~~~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~---~~~~~nl~~~~~~s 412 (508)
T 4f6l_B 357 SMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNKMP 412 (508)
T ss_dssp HHHHHHHTTCSEEETTGGGSEEECEEHHHHHHHHHHHTTBCC---SCSEEEESCSCEEE
T ss_pred HHHHHHHHHcCCCCCCccCceEEEEcHHHHHHHHHHHHhCCC---CCCEEEeCCCCCCC
Confidence 1112221111 11 1236678999999999997644 68999999987654
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=2.1e-18 Score=151.23 Aligned_cols=211 Identities=15% Similarity=0.045 Sum_probs=149.7
Q ss_pred EEEEecCCchhHHHHHHHHHHc--CCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 14 VALLTGGGSGIGFEISLQLGKH--GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
++|||||+|+||.+++++|+++ |++|++++|+....+ .+.++.+|++|.++++++++. .++|
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----------~~~~~~~D~~d~~~~~~~~~~-----~~~d 64 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-----------GIKFITLDVSNRDEIDRAVEK-----YSID 64 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-----------TCCEEECCTTCHHHHHHHHHH-----TTCC
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-----------CceEEEecCCCHHHHHHHHhh-----cCCc
Confidence 4899999999999999999999 899999998754311 366789999999999888764 2799
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC--------
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-------- 163 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~-------- 163 (298)
++||+|+.... ...++++..+++|+.++.++++++.+. + .+++|++||...+.+.
T Consensus 65 ~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~~~----~--------~~~~v~~SS~~~~~~~~~~~~~~e 127 (317)
T 3ajr_A 65 AIFHLAGILSA-----KGEKDPALAYKVNMNGTYNILEAAKQH----R--------VEKVVIPSTIGVFGPETPKNKVPS 127 (317)
T ss_dssp EEEECCCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHHHHT----T--------CCEEEEEEEGGGCCTTSCSSSBCS
T ss_pred EEEECCcccCC-----ccccChHHHhhhhhHHHHHHHHHHHHc----C--------CCEEEEecCHHHhCCCCCCCCccc
Confidence 99999985321 123457788999999999999987642 2 3679999998765432
Q ss_pred ----CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC-C----hHHHHHHHhhhc--------c
Q 022386 164 ----WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-A----PEEIRSKATDYM--------A 226 (298)
Q Consensus 164 ----~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~-~----~~~~~~~~~~~~--------~ 226 (298)
.+...|+.+|.+.+.+++.++.+. |++++.+.|+.+..+...... . ...+........ .
T Consensus 128 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~~----~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (317)
T 3ajr_A 128 ITITRPRTMFGVTKIAAELLGQYYYEKF----GLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNR 203 (317)
T ss_dssp SSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTC
T ss_pred cccCCCCchHHHHHHHHHHHHHHHHHhc----CCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccc
Confidence 135689999999999999988764 699999986666544221110 0 011111111110 0
Q ss_pred CCCCCCHHHHHHHHHHhcCCCC-CCccccEEEeCCC
Q 022386 227 AYKFGEKWDIAMAALYLASDAG-KYVNGNTLIVDGG 261 (298)
Q Consensus 227 ~~~~~~~~dva~~~~~L~s~~~-~~~~G~~i~~dgG 261 (298)
...+...+|++++++.++..+. ...+|+.+++.|+
T Consensus 204 ~~~~i~v~Dva~a~~~~l~~~~~~~~~g~~~~i~~~ 239 (317)
T 3ajr_A 204 ALPMMYMPDALKALVDLYEADRDKLVLRNGYNVTAY 239 (317)
T ss_dssp CEEEEEHHHHHHHHHHHHHCCGGGCSSCSCEECCSE
T ss_pred eeeeeEHHHHHHHHHHHHhCCccccccCceEecCCc
Confidence 1123468899999988875432 3345788888753
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.4e-19 Score=156.57 Aligned_cols=216 Identities=14% Similarity=0.050 Sum_probs=154.0
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
+++++|||| +|+||.++++.|+++|++|++++|+.+. ....+.++.+|++|.++++++++ +++
T Consensus 2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~----------~~~~~~~~~~Dl~d~~~~~~~~~------~~~ 64 (286)
T 3gpi_A 2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQP----------MPAGVQTLIADVTRPDTLASIVH------LRP 64 (286)
T ss_dssp CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSC----------CCTTCCEEECCTTCGGGCTTGGG------GCC
T ss_pred CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCccc----------cccCCceEEccCCChHHHHHhhc------CCC
Confidence 457899999 5999999999999999999999998653 13568889999999988887765 369
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC-------
Q 022386 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT------- 163 (298)
Q Consensus 91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~------- 163 (298)
|++||+|+.. ..+.+..+++|+.++..+++++. +.+ .+++|++||...+...
T Consensus 65 d~vih~a~~~---------~~~~~~~~~~n~~~~~~ll~a~~----~~~--------~~~~v~~SS~~vyg~~~~~~~~E 123 (286)
T 3gpi_A 65 EILVYCVAAS---------EYSDEHYRLSYVEGLRNTLSALE----GAP--------LQHVFFVSSTGVYGQEVEEWLDE 123 (286)
T ss_dssp SEEEECHHHH---------HHC-----CCSHHHHHHHHHHTT----TSC--------CCEEEEEEEGGGCCCCCSSEECT
T ss_pred CEEEEeCCCC---------CCCHHHHHHHHHHHHHHHHHHHh----hCC--------CCEEEEEcccEEEcCCCCCCCCC
Confidence 9999999852 24456778999999999988876 222 3689999997654322
Q ss_pred ----CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhh------hccCCCCCCH
Q 022386 164 ----WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD------YMAAYKFGEK 233 (298)
Q Consensus 164 ----~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 233 (298)
.+...|+.+|.+.+.+ +.. ++++.+.|+.+..+... .+...+.. ......+...
T Consensus 124 ~~~~~p~~~Y~~sK~~~E~~-~~~---------~~~~ilR~~~v~G~~~~------~~~~~~~~~~~~~~~~~~~~~i~v 187 (286)
T 3gpi_A 124 DTPPIAKDFSGKRMLEAEAL-LAA---------YSSTILRFSGIYGPGRL------RMIRQAQTPEQWPARNAWTNRIHR 187 (286)
T ss_dssp TSCCCCCSHHHHHHHHHHHH-GGG---------SSEEEEEECEEEBTTBC------HHHHHTTCGGGSCSSBCEECEEEH
T ss_pred CCCCCCCChhhHHHHHHHHH-Hhc---------CCeEEEecccccCCCch------hHHHHHHhcccCCCcCceeEEEEH
Confidence 1356899999998887 432 67899999999866432 12222211 1122346688
Q ss_pred HHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhhhc
Q 022386 234 WDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERK 285 (298)
Q Consensus 234 ~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~~~ 285 (298)
+|+|+++.+++..+.....|+.+++.+|..++ ...+.+.+.+.+...
T Consensus 188 ~Dva~~~~~~~~~~~~~~~~~~~~~~~~~~~s-----~~e~~~~i~~~~g~~ 234 (286)
T 3gpi_A 188 DDGAAFIAYLIQQRSHAVPERLYIVTDNQPLP-----VHDLLRWLADRQGIA 234 (286)
T ss_dssp HHHHHHHHHHHHHHTTSCCCSEEEECCSCCEE-----HHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHhhhccCCCCceEEEeCCCCCC-----HHHHHHHHHHHcCCC
Confidence 99999999999764334568899998887654 455555555555443
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.3e-18 Score=152.06 Aligned_cols=228 Identities=14% Similarity=0.082 Sum_probs=155.6
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
.|+++++|||||+|+||++++++|+++|+ +... ....+.++.+|++|.+++.++++..
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~-----------~~~~~~~~~~D~~d~~~~~~~~~~~----- 60 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGE-----------DWVFVSSKDADLTDTAQTRALFEKV----- 60 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTC-----------EEEECCTTTCCTTSHHHHHHHHHHS-----
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhcCC------cccc-----------cccccCceecccCCHHHHHHHHhhc-----
Confidence 35678999999999999999999999997 1100 0011333478999999999888742
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC------
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA------ 162 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~------ 162 (298)
++|++||+|+..... ....++....+++|+.++.++++++... + -.++|++||...+..
T Consensus 61 ~~d~Vih~A~~~~~~---~~~~~~~~~~~~~nv~gt~~ll~a~~~~----~--------~~~~v~~SS~~vyg~~~~~~~ 125 (319)
T 4b8w_A 61 QPTHVIHLAAMVGGL---FRNIKYNLDFWRKNVHMNDNVLHSAFEV----G--------ARKVVSCLSTCIFPDKTTYPI 125 (319)
T ss_dssp CCSEEEECCCCCCCH---HHHTTCHHHHHHHHHHHHHHHHHHHHHT----T--------CSEEEEECCGGGSCSSCCSSB
T ss_pred CCCEEEECceecccc---cccccCHHHHHHHHHHHHHHHHHHHHHc----C--------CCeEEEEcchhhcCCCCCCCc
Confidence 699999999963210 0112345678999999999999887542 2 357999999865421
Q ss_pred ----------CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC----ChHHHHHH----Hhhh
Q 022386 163 ----------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL----APEEIRSK----ATDY 224 (298)
Q Consensus 163 ----------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~----~~~~~~~~----~~~~ 224 (298)
.+....|+.+|.+.+.+++.++.+. |++++.+.|+.+..+...... .-+.+... ....
T Consensus 126 ~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (319)
T 4b8w_A 126 DETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQY----GCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSG 201 (319)
T ss_dssp CGGGGGBSCCCSSSHHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHT
T ss_pred cccccccCCCCCCcchHHHHHHHHHHHHHHHHHhh----CCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccC
Confidence 1222369999999999999998875 599999999999876543211 11222222 2222
Q ss_pred cc---------CCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhh
Q 022386 225 MA---------AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVE 283 (298)
Q Consensus 225 ~~---------~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~ 283 (298)
.+ ...+...+|+|+++..++.... ...|+.+++.+|..++ ...+.+.+.+.+.
T Consensus 202 ~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~-~~~~~~~ni~~~~~~s-----~~e~~~~i~~~~g 263 (319)
T 4b8w_A 202 SALTVWGTGNPRRQFIYSLDLAQLFIWVLREYN-EVEPIILSVGEEDEVS-----IKEAAEAVVEAMD 263 (319)
T ss_dssp CCEEEESCSCCEECEEEHHHHHHHHHHHHHHCC-CSSCEEECCCGGGCEE-----HHHHHHHHHHHTT
T ss_pred CceEEeCCCCeeEEEEeHHHHHHHHHHHHhccc-cCCceEEEecCCCcee-----HHHHHHHHHHHhC
Confidence 11 1234689999999999886532 2457788888776665 3455555544443
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=9.5e-18 Score=144.82 Aligned_cols=208 Identities=12% Similarity=0.078 Sum_probs=141.5
Q ss_pred EEEEecCCchhHHHHHHHHHHc--CCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 14 VALLTGGGSGIGFEISLQLGKH--GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
+++||||+|+||++++++|+++ |++|++++|+.+..+.+. . ..+.++.+|++|.++++++++ .+|
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~----~--~~~~~~~~D~~d~~~~~~~~~-------~~d 67 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA----A--QGITVRQADYGDEAALTSALQ-------GVE 67 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH----H--TTCEEEECCTTCHHHHHHHTT-------TCS
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh----c--CCCeEEEcCCCCHHHHHHHHh-------CCC
Confidence 4899999999999999999998 999999999876543322 2 247889999999998887764 689
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHH
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~ 171 (298)
++||+|+... ..|+.++..+++++. +.+ .++||++||...+ . ....|+.
T Consensus 68 ~vi~~a~~~~----------------~~~~~~~~~l~~a~~----~~~--------~~~~v~~Ss~~~~-~--~~~~y~~ 116 (286)
T 2zcu_A 68 KLLLISSSEV----------------GQRAPQHRNVINAAK----AAG--------VKFIAYTSLLHAD-T--SPLGLAD 116 (286)
T ss_dssp EEEECC------------------------CHHHHHHHHHH----HHT--------CCEEEEEEETTTT-T--CCSTTHH
T ss_pred EEEEeCCCCc----------------hHHHHHHHHHHHHHH----HcC--------CCEEEEECCCCCC-C--CcchhHH
Confidence 9999998421 025556666655554 332 3679999998765 2 2347999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHH----hhhccCCCCCCHHHHHHHHHHhcCCC
Q 022386 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA----TDYMAAYKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~dva~~~~~L~s~~ 247 (298)
+|.+.+.+++. .|++++.+.||++.++.. ... ......- ........+.+++|+|+++.+++..+
T Consensus 117 sK~~~e~~~~~--------~~~~~~ilrp~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~ 185 (286)
T 2zcu_A 117 EHIETEKMLAD--------SGIVYTLLRNGWYSENYL-ASA--PAALEHGVFIGAAGDGKIASATRADYAAAAARVISEA 185 (286)
T ss_dssp HHHHHHHHHHH--------HCSEEEEEEECCBHHHHH-TTH--HHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHH--------cCCCeEEEeChHHhhhhH-HHh--HHhhcCCceeccCCCCccccccHHHHHHHHHHHhcCC
Confidence 99999988863 269999999998864321 110 1111100 00112245779999999999999754
Q ss_pred CCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhh
Q 022386 248 GKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVE 283 (298)
Q Consensus 248 ~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~ 283 (298)
. .+|+.+++.|+..++ ...+.+.+.+.+.
T Consensus 186 ~--~~g~~~~i~~~~~~s-----~~e~~~~i~~~~g 214 (286)
T 2zcu_A 186 G--HEGKVYELAGDSAWT-----LTQLAAELTKQSG 214 (286)
T ss_dssp S--CTTCEEEECCSSCBC-----HHHHHHHHHHHHS
T ss_pred C--CCCceEEEeCCCcCC-----HHHHHHHHHHHHC
Confidence 3 478999999986654 3444444444443
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.74 E-value=1.1e-17 Score=145.60 Aligned_cols=222 Identities=11% Similarity=0.002 Sum_probs=144.0
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcC-CcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|+++||||+|+||++++++|+++| ++|++++|+.+.... ..+.. ..+.++.+|++|.++++++++ .+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~--~~~~~~~~D~~d~~~l~~~~~-------~~ 73 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL--QGAEVVQGDQDDQVIMELALN-------GA 73 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH--TTCEEEECCTTCHHHHHHHHT-------TC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH--CCCEEEEecCCCHHHHHHHHh-------cC
Confidence 5899999999999999999999999 999999998654321 22332 247889999999999888775 69
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc--CCCCchh
Q 022386 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT--ATWYQIH 168 (298)
Q Consensus 91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~--~~~~~~~ 168 (298)
|++||+++.... + ..+.|+.+...+ ++.+++.+ .++||++|+..... .......
T Consensus 74 d~vi~~a~~~~~----------~--~~~~~~~~~~~~----~~aa~~~g--------v~~iv~~S~~~~~~~~~~~~~~~ 129 (299)
T 2wm3_A 74 YATFIVTNYWES----------C--SQEQEVKQGKLL----ADLARRLG--------LHYVVYSGLENIKKLTAGRLAAA 129 (299)
T ss_dssp SEEEECCCHHHH----------T--CHHHHHHHHHHH----HHHHHHHT--------CSEEEECCCCCHHHHTTTSCCCH
T ss_pred CEEEEeCCCCcc----------c--cchHHHHHHHHH----HHHHHHcC--------CCEEEEEcCccccccCCCcccCc
Confidence 999999974210 0 123444444444 44444443 46799966644321 1122467
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHH--Hhhhcc----CCCCCCHHHHHHHHHH
Q 022386 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK--ATDYMA----AYKFGEKWDIAMAALY 242 (298)
Q Consensus 169 Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~dva~~~~~ 242 (298)
|..+|.+++.+++. . |++++.+.||++.++....... ...... ..-..+ ...+.+++|+|+++..
T Consensus 130 y~~sK~~~e~~~~~----~----gi~~~ilrp~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~ 200 (299)
T 2wm3_A 130 HFDGKGEVEEYFRD----I----GVPMTSVRLPCYFENLLSHFLP-QKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLS 200 (299)
T ss_dssp HHHHHHHHHHHHHH----H----TCCEEEEECCEEGGGGGTTTCC-EECTTSSSEEECCCCTTSCEEEECGGGHHHHHHH
T ss_pred hhhHHHHHHHHHHH----C----CCCEEEEeecHHhhhchhhcCC-cccCCCCEEEEEecCCCCccceecHHHHHHHHHH
Confidence 99999999988764 1 6999999999998653221111 000000 000011 1235688999999999
Q ss_pred hcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhhh
Q 022386 243 LASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVER 284 (298)
Q Consensus 243 L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~~ 284 (298)
++..+. ...|+.+++.|. .++ .+.+.+.+.+.+.+
T Consensus 201 ~l~~~~-~~~g~~~~~~g~-~~s-----~~e~~~~~~~~~g~ 235 (299)
T 2wm3_A 201 LLKMPE-KYVGQNIGLSTC-RHT-----AEEYAALLTKHTRK 235 (299)
T ss_dssp HHHSHH-HHTTCEEECCSE-EEC-----HHHHHHHHHHHHSS
T ss_pred HHcChh-hhCCeEEEeeec-cCC-----HHHHHHHHHHHHCC
Confidence 986532 236889998763 443 45555555555544
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.2e-17 Score=148.86 Aligned_cols=224 Identities=15% Similarity=0.097 Sum_probs=145.1
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEcc-CCCHHHHHHHHHHHHHHhC
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD-VRKREDAVRVVESTINHFG 88 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D-ls~~~~~~~~~~~~~~~~~ 88 (298)
+.+|+++||||+|+||+++++.|+++|++|++++|+.+... .+.+.. ...+.++.+| ++|.+++.++++
T Consensus 3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~-~~~v~~v~~D~l~d~~~l~~~~~------- 72 (352)
T 1xgk_A 3 QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA-IPNVTLFQGPLLNNVPLMDTLFE------- 72 (352)
T ss_dssp CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT-STTEEEEESCCTTCHHHHHHHHT-------
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh-cCCcEEEECCccCCHHHHHHHHh-------
Confidence 34689999999999999999999999999999999876432 122332 2358889999 999999888765
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccc-cccCCCCch
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL-HYTATWYQI 167 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~-~~~~~~~~~ 167 (298)
.+|++|||++... . +.|..+ .+++++ +++.+. -++||++||.. ...+.+...
T Consensus 73 ~~d~Vi~~a~~~~------~---------~~~~~~-~~l~~a----a~~~g~-------v~~~V~~SS~~~~~~~~~~~~ 125 (352)
T 1xgk_A 73 GAHLAFINTTSQA------G---------DEIAIG-KDLADA----AKRAGT-------IQHYIYSSMPDHSLYGPWPAV 125 (352)
T ss_dssp TCSEEEECCCSTT------S---------CHHHHH-HHHHHH----HHHHSC-------CSEEEEEECCCGGGTSSCCCC
T ss_pred cCCEEEEcCCCCC------c---------HHHHHH-HHHHHH----HHHcCC-------ccEEEEeCCccccccCCCCCc
Confidence 6899999997431 0 124443 444444 433210 15799999986 333434456
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC----hHHHHH-HHhhhcc-----CCCCCCH-HHH
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA----PEEIRS-KATDYMA-----AYKFGEK-WDI 236 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~----~~~~~~-~~~~~~~-----~~~~~~~-~dv 236 (298)
.|..+|.+.+.+++. .|++++.|.||++.+. ...... ...... ...-..+ ...+.++ +|+
T Consensus 126 ~y~~sK~~~E~~~~~--------~gi~~~ivrpg~~g~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dv 196 (352)
T 1xgk_A 126 PMWAPKFTVENYVRQ--------LGLPSTFVYAGIYNNN-FTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDV 196 (352)
T ss_dssp TTTHHHHHHHHHHHT--------SSSCEEEEEECEEGGG-CBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHH
T ss_pred cHHHHHHHHHHHHHH--------cCCCEEEEecceecCC-chhcccccccccccCCCceEEeeccCCCCceeeEecHHHH
Confidence 899999999988864 2689999999977432 211100 000000 0000001 1125577 899
Q ss_pred HHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhhhc
Q 022386 237 AMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERK 285 (298)
Q Consensus 237 a~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~~~ 285 (298)
|+++..++..+.....|+.+++.++ .++ .+.+.+.+.+.+..+
T Consensus 197 a~ai~~~l~~~~~~~~g~~~~l~~~-~~s-----~~e~~~~i~~~~G~~ 239 (352)
T 1xgk_A 197 GPALLQIFKDGPQKWNGHRIALTFE-TLS-----PVQVCAAFSRALNRR 239 (352)
T ss_dssp HHHHHHHHHHCHHHHTTCEEEECSE-EEC-----HHHHHHHHHHHHTSC
T ss_pred HHHHHHHHhCCchhhCCeEEEEecC-CCC-----HHHHHHHHHHHHCCC
Confidence 9999999965433456899999864 333 455555555555443
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.73 E-value=5.5e-17 Score=140.41 Aligned_cols=211 Identities=15% Similarity=0.023 Sum_probs=136.4
Q ss_pred EEEEecCCchhHHHHHHHHHHc-CCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 14 VALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
+++||||||+||+++++.|++. |++|++++|+.+....+ ....+.++.+|++|.+++.++++ ++|+
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~------~~~~v~~~~~D~~d~~~l~~~~~-------~~d~ 68 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD------WRGKVSVRQLDYFNQESMVEAFK-------GMDT 68 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG------GBTTBEEEECCTTCHHHHHHHTT-------TCSE
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh------hhCCCEEEEcCCCCHHHHHHHHh-------CCCE
Confidence 5999999999999999999998 99999999997643321 12458899999999998888765 7999
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHHH
Q 022386 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 172 (298)
Q Consensus 93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~s 172 (298)
+||+++.... . ..|+.++. .+++.+++.+ -++||++||.......+ |..+
T Consensus 69 vi~~a~~~~~-------~-------~~~~~~~~----~l~~aa~~~g--------v~~iv~~Ss~~~~~~~~----~~~~ 118 (289)
T 3e48_A 69 VVFIPSIIHP-------S-------FKRIPEVE----NLVYAAKQSG--------VAHIIFIGYYADQHNNP----FHMS 118 (289)
T ss_dssp EEECCCCCCS-------H-------HHHHHHHH----HHHHHHHHTT--------CCEEEEEEESCCSTTCC----STTH
T ss_pred EEEeCCCCcc-------c-------hhhHHHHH----HHHHHHHHcC--------CCEEEEEcccCCCCCCC----Cccc
Confidence 9999985321 1 12455544 4444455543 46899999965432222 2222
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCC----CCCHHHHHHHHHHhcCCCC
Q 022386 173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK----FGEKWDIAMAALYLASDAG 248 (298)
Q Consensus 173 K~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~dva~~~~~L~s~~~ 248 (298)
+... .++. .+. ..|++++.+.||++.++.. .. -...........+.+. +.+++|+|+++.+++..+.
T Consensus 119 ~~~~--~~e~---~~~-~~g~~~~ilrp~~~~~~~~-~~--~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~ 189 (289)
T 3e48_A 119 PYFG--YASR---LLS-TSGIDYTYVRMAMYMDPLK-PY--LPELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPD 189 (289)
T ss_dssp HHHH--HHHH---HHH-HHCCEEEEEEECEESTTHH-HH--HHHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGG
T ss_pred hhHH--HHHH---HHH-HcCCCEEEEeccccccccH-HH--HHHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCC
Confidence 2211 1221 222 3379999999999976521 00 0111111111112222 6789999999999997654
Q ss_pred CCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhhh
Q 022386 249 KYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVER 284 (298)
Q Consensus 249 ~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~~ 284 (298)
.. |+.+++. |..++ ...+.+.+.+.+.+
T Consensus 190 ~~--g~~~~~~-~~~~s-----~~e~~~~~~~~~g~ 217 (289)
T 3e48_A 190 TW--GKRYLLS-GYSYD-----MKELAAILSEASGT 217 (289)
T ss_dssp GT--TCEEEEC-CEEEE-----HHHHHHHHHHHHTS
T ss_pred cC--CceEEeC-CCcCC-----HHHHHHHHHHHHCC
Confidence 33 8999999 76665 35555555555544
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=3.7e-16 Score=139.41 Aligned_cols=230 Identities=14% Similarity=0.047 Sum_probs=151.5
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcC-----CcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHG-----AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G-----~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
+|+++||||+|+||.+++++|+++| ++|++++|+..... ....++.++.+|++|.+++.++++..
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-------~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 70 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-------HEDNPINYVQCDISDPDDSQAKLSPL--- 70 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-------CCSSCCEEEECCTTSHHHHHHHHTTC---
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-------cccCceEEEEeecCCHHHHHHHHhcC---
Confidence 5789999999999999999999999 99999999865321 12346888999999999888776522
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEE-------Eeccccc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIII-------NISATLH 159 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv-------~vss~~~ 159 (298)
.++|++||+|+... ++.+..+++|+.++.++++++.+.... -.++| ++||...
T Consensus 71 -~~~d~vih~a~~~~---------~~~~~~~~~n~~~~~~l~~a~~~~~~~----------~~~~v~~~g~~i~~Ss~~v 130 (364)
T 2v6g_A 71 -TDVTHVFYVTWANR---------STEQENCEANSKMFRNVLDAVIPNCPN----------LKHISLQTGRKHYMGPFES 130 (364)
T ss_dssp -TTCCEEEECCCCCC---------SSHHHHHHHHHHHHHHHHHHHTTTCTT----------CCEEEEECCTHHHHCCGGG
T ss_pred -CCCCEEEECCCCCc---------chHHHHHHHhHHHHHHHHHHHHHhccc----------cceEEeccCceEEEechhh
Confidence 24999999999642 235678899999999999988754211 23465 6777654
Q ss_pred ccCC--------------CCchhhHHHHHHHHHHHHHHHHHhcCCCC-eEEEEEeCCcccCCcccCcCC--hHH-HHHHH
Q 022386 160 YTAT--------------WYQIHVSAAKAAVDSITRSLALEWGTDYA-IRVNGIAPGPIKDTAGVSKLA--PEE-IRSKA 221 (298)
Q Consensus 160 ~~~~--------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~g-irv~~i~PG~v~t~~~~~~~~--~~~-~~~~~ 221 (298)
+... +....|. +.+.+++.++. .+| +++..+.|+.+..+....... ... ....+
T Consensus 131 yg~~~~~~~~~~E~~~~~~~~~~y~----~~E~~~~~~~~----~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~ 202 (364)
T 2v6g_A 131 YGKIESHDPPYTEDLPRLKYMNFYY----DLEDIMLEEVE----KKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAI 202 (364)
T ss_dssp TTTSCCCCSSBCTTSCCCSSCCHHH----HHHHHHHHHHT----TSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHH
T ss_pred ccccccCCCCCCccccCCccchhhH----HHHHHHHHHhh----cCCCceEEEECCCceeCCCCCcccchHHHHHHHHHH
Confidence 3211 1123462 23444444432 345 999999999998764432111 011 12222
Q ss_pred --hhhccC------------CCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhhhcc
Q 022386 222 --TDYMAA------------YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERKS 286 (298)
Q Consensus 222 --~~~~~~------------~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (298)
....+. ..+.+.+|+|++++.++..+ ...|+.+++.++..++ ...+++.+.+.+....
T Consensus 203 ~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~--~~~g~~~ni~~~~~~s-----~~e~~~~i~~~~g~~~ 274 (364)
T 2v6g_A 203 CKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVDP--YAKNEAFNVSNGDVFK-----WKHFWKVLAEQFGVEC 274 (364)
T ss_dssp HHHHTCCBCCCSCHHHHHSCBCCEEHHHHHHHHHHHHHCG--GGTTEEEEECCSCCBC-----HHHHHHHHHHHHTCCB
T ss_pred HHhcCCceecCCCcccccccCCCCcHHHHHHHHHHHHhCC--CCCCceEEecCCCcCC-----HHHHHHHHHHHhCCCC
Confidence 112111 12334488999999888643 2368899998886554 4666666666665443
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.71 E-value=3.7e-16 Score=134.93 Aligned_cols=208 Identities=12% Similarity=-0.036 Sum_probs=141.8
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
++++|||+ |+||.+++++|+++|++|++++|+......+.. ..+.++.+|++|.+ +.++|+
T Consensus 6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~D~~d~~------------~~~~d~ 66 (286)
T 3ius_A 6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA------SGAEPLLWPGEEPS------------LDGVTH 66 (286)
T ss_dssp CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH------TTEEEEESSSSCCC------------CTTCCE
T ss_pred CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh------CCCeEEEecccccc------------cCCCCE
Confidence 68999998 999999999999999999999999876544322 35889999999832 468999
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh--cCCCCCCCCCCcEEEEecccccccCC-------
Q 022386 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKK--GGRGQASSSSGGIIINISATLHYTAT------- 163 (298)
Q Consensus 93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~~~~~~~~g~iv~vss~~~~~~~------- 163 (298)
+||+|+..... .. . .+.++..+.+ .+ ..++|++||...+...
T Consensus 67 vi~~a~~~~~~-----~~--~--------------~~~l~~a~~~~~~~--------~~~~v~~Ss~~vyg~~~~~~~~E 117 (286)
T 3ius_A 67 LLISTAPDSGG-----DP--V--------------LAALGDQIAARAAQ--------FRWVGYLSTTAVYGDHDGAWVDE 117 (286)
T ss_dssp EEECCCCBTTB-----CH--H--------------HHHHHHHHHHTGGG--------CSEEEEEEEGGGGCCCTTCEECT
T ss_pred EEECCCccccc-----cH--H--------------HHHHHHHHHhhcCC--------ceEEEEeecceecCCCCCCCcCC
Confidence 99999854321 11 0 1334444444 22 3679999997654221
Q ss_pred ----CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC--hHHHHHHHhhhccCCCCCCHHHHH
Q 022386 164 ----WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDYMAAYKFGEKWDIA 237 (298)
Q Consensus 164 ----~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva 237 (298)
.+...|+.+|.+.+.+++.+ .|++++.+.|+.+..+....... .... ..+........+...+|+|
T Consensus 118 ~~~~~p~~~Y~~sK~~~E~~~~~~-------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~Dva 189 (286)
T 3ius_A 118 TTPLTPTAARGRWRVMAEQQWQAV-------PNLPLHVFRLAGIYGPGRGPFSKLGKGGI-RRIIKPGQVFSRIHVEDIA 189 (286)
T ss_dssp TSCCCCCSHHHHHHHHHHHHHHHS-------TTCCEEEEEECEEEBTTBSSSTTSSSSCC-CEEECTTCCBCEEEHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhh-------cCCCEEEEeccceECCCchHHHHHhcCCc-cccCCCCcccceEEHHHHH
Confidence 12357999999999998876 27999999999998764221100 0000 0000001223466789999
Q ss_pred HHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhhh
Q 022386 238 MAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVER 284 (298)
Q Consensus 238 ~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~~ 284 (298)
+++..++.... .|+.+++.+|..++ ...+.+.+.+.+..
T Consensus 190 ~a~~~~~~~~~---~g~~~~i~~~~~~s-----~~e~~~~i~~~~g~ 228 (286)
T 3ius_A 190 QVLAASMARPD---PGAVYNVCDDEPVP-----PQDVIAYAAELQGL 228 (286)
T ss_dssp HHHHHHHHSCC---TTCEEEECCSCCBC-----HHHHHHHHHHHHTC
T ss_pred HHHHHHHhCCC---CCCEEEEeCCCCcc-----HHHHHHHHHHHcCC
Confidence 99999997644 68899999887665 45555666555543
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.3e-16 Score=141.69 Aligned_cols=207 Identities=14% Similarity=0.050 Sum_probs=136.3
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh----hHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK----TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~----~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
.|..++++||||||+||+++++.|+++|++|++++|+. ++.+ ..+.+.. ..+.++.+|++|.+++.+++++.
T Consensus 7 ~M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~~~l~~--~~v~~~~~Dl~d~~~l~~~~~~~- 82 (346)
T 3i6i_A 7 PSPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAK-IFKALED--KGAIIVYGLINEQEAMEKILKEH- 82 (346)
T ss_dssp ----CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH-HHHHHHH--TTCEEEECCTTCHHHHHHHHHHT-
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHH-HHHHHHh--CCcEEEEeecCCHHHHHHHHhhC-
Confidence 35568999999999999999999999999999999976 2222 2223333 45888999999999999888752
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc----
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY---- 160 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~---- 160 (298)
++|++||+++. .|+.++..+++++...- . -.++|+ |+....
T Consensus 83 ----~~d~Vi~~a~~-------------------~n~~~~~~l~~aa~~~g---~--------v~~~v~-S~~g~~~~e~ 127 (346)
T 3i6i_A 83 ----EIDIVVSTVGG-------------------ESILDQIALVKAMKAVG---T--------IKRFLP-SEFGHDVNRA 127 (346)
T ss_dssp ----TCCEEEECCCG-------------------GGGGGHHHHHHHHHHHC---C--------CSEEEC-SCCSSCTTTC
T ss_pred ----CCCEEEECCch-------------------hhHHHHHHHHHHHHHcC---C--------ceEEee-cccCCCCCcc
Confidence 79999999985 27888888877776432 0 134554 433221
Q ss_pred cCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHH-------HHHHhhhccCCCCCCH
Q 022386 161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI-------RSKATDYMAAYKFGEK 233 (298)
Q Consensus 161 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 233 (298)
.+..+...|..+|.+++.+.+. .|++++.+.||++..... ........ ............+.+.
T Consensus 128 ~~~~p~~~y~~sK~~~e~~l~~--------~g~~~tivrpg~~~g~~~-~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~ 198 (346)
T 3i6i_A 128 DPVEPGLNMYREKRRVRQLVEE--------SGIPFTYICCNSIASWPY-YNNIHPSEVLPPTDFFQIYGDGNVKAYFVAG 198 (346)
T ss_dssp CCCTTHHHHHHHHHHHHHHHHH--------TTCCBEEEECCEESSCCC-SCC-----CCCCSSCEEEETTSCCCEEEECH
T ss_pred CcCCCcchHHHHHHHHHHHHHH--------cCCCEEEEEecccccccC-ccccccccccCCCceEEEccCCCceEEecCH
Confidence 1123457899999998887764 269999999998865321 11110000 0000011112346789
Q ss_pred HHHHHHHHHhcCCCCCCccccEEEeCC-CCCCC
Q 022386 234 WDIAMAALYLASDAGKYVNGNTLIVDG-GNWLS 265 (298)
Q Consensus 234 ~dva~~~~~L~s~~~~~~~G~~i~~dg-G~~~~ 265 (298)
+|+|+++..++..+. ..|+.+.+-| |..++
T Consensus 199 ~Dva~~~~~~l~~~~--~~~~~~~i~g~~~~~s 229 (346)
T 3i6i_A 199 TDIGKFTMKTVDDVR--TLNKSVHFRPSCNCLN 229 (346)
T ss_dssp HHHHHHHHHHTTCGG--GTTEEEECCCGGGEEC
T ss_pred HHHHHHHHHHHhCcc--ccCeEEEEeCCCCCCC
Confidence 999999999997642 3366777754 44444
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.6e-16 Score=138.57 Aligned_cols=197 Identities=15% Similarity=0.119 Sum_probs=126.5
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh-------hHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-------TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
+++++||||||+||++++++|+++|++|++++|+. ++.+.+ +.+.. ..+.++.+|++|.+++.++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~--~~v~~v~~D~~d~~~l~~~~~--- 75 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQS--LGVILLEGDINDHETLVKAIK--- 75 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHHH--TTCEEEECCTTCHHHHHHHHT---
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHHh--CCCEEEEeCCCCHHHHHHHHh---
Confidence 46899999999999999999999999999999986 333332 33333 247889999999998887775
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc---
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT--- 161 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~--- 161 (298)
++|++||+++... +.+...+++++ ++.+. -+++| . |..+..
T Consensus 76 ----~~d~vi~~a~~~~-------------------~~~~~~l~~aa----~~~g~-------v~~~v-~-S~~g~~~~~ 119 (307)
T 2gas_A 76 ----QVDIVICAAGRLL-------------------IEDQVKIIKAI----KEAGN-------VKKFF-P-SEFGLDVDR 119 (307)
T ss_dssp ----TCSEEEECSSSSC-------------------GGGHHHHHHHH----HHHCC-------CSEEE-C-SCCSSCTTS
T ss_pred ----CCCEEEECCcccc-------------------cccHHHHHHHH----HhcCC-------ceEEe-e-cccccCccc
Confidence 6999999998532 22334444443 33210 14566 2 333311
Q ss_pred ---CCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC------hHHHHHHHhhhccCCCCCC
Q 022386 162 ---ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA------PEEIRSKATDYMAAYKFGE 232 (298)
Q Consensus 162 ---~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 232 (298)
..+....| .+|.+++.+++. . |++++.+.||++.+........ ................+.+
T Consensus 120 ~~~~~p~~~~y-~sK~~~e~~~~~----~----~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 190 (307)
T 2gas_A 120 HDAVEPVRQVF-EEKASIRRVIEA----E----GVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVT 190 (307)
T ss_dssp CCCCTTHHHHH-HHHHHHHHHHHH----H----TCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEEC
T ss_pred ccCCCcchhHH-HHHHHHHHHHHH----c----CCCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEee
Confidence 12224678 999998887753 2 6889999999987643211100 0000000001111234668
Q ss_pred HHHHHHHHHHhcCCCCCCccccEEEeCCC
Q 022386 233 KWDIAMAALYLASDAGKYVNGNTLIVDGG 261 (298)
Q Consensus 233 ~~dva~~~~~L~s~~~~~~~G~~i~~dgG 261 (298)
++|+|+++..++.++. ..|+.+.+.|.
T Consensus 191 ~~Dva~~~~~~l~~~~--~~~~~~~~~~~ 217 (307)
T 2gas_A 191 EADVGTFTIRAANDPN--TLNKAVHIRLP 217 (307)
T ss_dssp HHHHHHHHHHHHTCGG--GTTEEEECCCG
T ss_pred HHHHHHHHHHHHcCcc--ccCceEEEeCC
Confidence 9999999999997642 23677777653
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.69 E-value=6.6e-17 Score=144.88 Aligned_cols=193 Identities=12% Similarity=-0.030 Sum_probs=140.8
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
++++||||+|+||++++++|+++|+ +|+.++|+ +|.++++++++ ++|
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-------------------------~d~~~l~~~~~-------~~d 48 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-------------------------TKEEELESALL-------KAD 48 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-------------------------CCHHHHHHHHH-------HCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-------------------------CCHHHHHHHhc-------cCC
Confidence 3699999999999999999999998 77666554 67788888776 499
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHH
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~ 171 (298)
++||+|+..... .....+++|+.++..+++++. +.+ ...++|++||...+. ...|+.
T Consensus 49 ~Vih~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~----~~~-------~~~~~v~~Ss~~~~~----~~~Y~~ 105 (369)
T 3st7_A 49 FIVHLAGVNRPE--------HDKEFSLGNVSYLDHVLDILT----RNT-------KKPAILLSSSIQATQ----DNPYGE 105 (369)
T ss_dssp EEEECCCSBCTT--------CSTTCSSSCCBHHHHHHHHHT----TCS-------SCCEEEEEEEGGGGS----CSHHHH
T ss_pred EEEECCcCCCCC--------CHHHHHHHHHHHHHHHHHHHH----HhC-------CCCeEEEeCchhhcC----CCCchH
Confidence 999999964422 234467789999998888774 221 024799999987764 568999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC--ChHHHHHHHhhhccCC--------CCCCHHHHHHHHH
Q 022386 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL--APEEIRSKATDYMAAY--------KFGEKWDIAMAAL 241 (298)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~--------~~~~~~dva~~~~ 241 (298)
+|.+.+.+++.++.+. |+++..+.|+.+..+...... .-..+........+.. .+...+|+|+++.
T Consensus 106 sK~~~E~~~~~~~~~~----g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 181 (369)
T 3st7_A 106 SKLQGEQLLREYAEEY----GNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIK 181 (369)
T ss_dssp HHHHHHHHHHHHHHHH----CCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh----CCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHH
Confidence 9999999999998885 589999999999876433321 1122333333322221 2456889999999
Q ss_pred HhcCCCCCCccccEEEeCCCCCCC
Q 022386 242 YLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 242 ~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
.++..+.. ..|+.+++.+|..++
T Consensus 182 ~~l~~~~~-~~~~~~~i~~~~~~s 204 (369)
T 3st7_A 182 RAIEGTPT-IENGVPTVPNVFKVT 204 (369)
T ss_dssp HHHHTCCC-EETTEECCSCCEEEE
T ss_pred HHHhCCcc-cCCceEEeCCCCcee
Confidence 99976432 248899998886654
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.65 E-value=6.9e-16 Score=134.87 Aligned_cols=219 Identities=16% Similarity=0.111 Sum_probs=134.8
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh-----HHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-----VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.++++||||||+||++++++|+++|++|++++|+.. +.+. ...+. ...+.++.+|++|.+++.++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~~~--~~~~~~~~~D~~d~~~l~~~~~----- 75 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQM-LLYFK--QLGAKLIEASLDDHQRLVDALK----- 75 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHH-HHHHH--TTTCEEECCCSSCHHHHHHHHT-----
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHH-HHHHH--hCCeEEEeCCCCCHHHHHHHHh-----
Confidence 468999999999999999999999999999999842 2222 22232 2457889999999998888775
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC----
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA---- 162 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~---- 162 (298)
++|++||+++..... .|+.+...+++++. +.+. -+++|+ |+......
T Consensus 76 --~~d~vi~~a~~~~~~---------------~~~~~~~~l~~aa~----~~g~-------v~~~v~-S~~g~~~~~~~~ 126 (313)
T 1qyd_A 76 --QVDVVISALAGGVLS---------------HHILEQLKLVEAIK----EAGN-------IKRFLP-SEFGMDPDIMEH 126 (313)
T ss_dssp --TCSEEEECCCCSSSS---------------TTTTTHHHHHHHHH----HSCC-------CSEEEC-SCCSSCTTSCCC
T ss_pred --CCCEEEECCccccch---------------hhHHHHHHHHHHHH----hcCC-------CceEEe-cCCcCCcccccc
Confidence 699999999864321 25556655555543 3210 245764 33221111
Q ss_pred --CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC-------ChHHHHHHHhhhccCCCCCCH
Q 022386 163 --TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-------APEEIRSKATDYMAAYKFGEK 233 (298)
Q Consensus 163 --~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 233 (298)
.+....| .+|.+++.+.+ + .|++++.+.||++.+....... .................+.++
T Consensus 127 ~~~p~~~~y-~sK~~~e~~~~----~----~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~ 197 (313)
T 1qyd_A 127 ALQPGSITF-IDKRKVRRAIE----A----ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDE 197 (313)
T ss_dssp CCSSTTHHH-HHHHHHHHHHH----H----TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECH
T ss_pred CCCCCcchH-HHHHHHHHHHH----h----cCCCeEEEEeceeccccccccccccccccCCCCeEEEeCCCCceEEEEEH
Confidence 1335678 99999888775 2 2688888999988642111000 000000000000111235689
Q ss_pred HHHHHHHHHhcCCCCCCccccEEEeCCC-CCCCCCCCCchhHHHhhHHhhh
Q 022386 234 WDIAMAALYLASDAGKYVNGNTLIVDGG-NWLSNPRDLPKEAVNQLSRAVE 283 (298)
Q Consensus 234 ~dva~~~~~L~s~~~~~~~G~~i~~dgG-~~~~~~~~~~~~~~~~~~~~~~ 283 (298)
+|+++++..++..+. ..|+.+.+.|. ..++ ...+.+.+.+.+.
T Consensus 198 ~Dva~~~~~~l~~~~--~~~~~~~~~g~~~~~s-----~~e~~~~~~~~~g 241 (313)
T 1qyd_A 198 DDVGTYTIKSIDDPQ--TLNKTMYIRPPMNILS-----QKEVIQIWERLSE 241 (313)
T ss_dssp HHHHHHHHHHTTCGG--GSSSEEECCCGGGEEE-----HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCcc--cCCceEEEeCCCCccC-----HHHHHHHHHHhcC
Confidence 999999999997642 23677777653 4443 3444444444443
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.64 E-value=3.4e-16 Score=137.50 Aligned_cols=201 Identities=13% Similarity=0.079 Sum_probs=125.2
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh-h----HHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-T----VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~-~----~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.++++||||+|+||.+++++|+++|++|++++|+. . ...+....+.. ..+.++.+|++|.+++.++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~--~~v~~v~~D~~d~~~l~~a~~----- 76 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRS--MGVTIIEGEMEEHEKMVSVLK----- 76 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHH--TTCEEEECCTTCHHHHHHHHT-----
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhc--CCcEEEEecCCCHHHHHHHHc-----
Confidence 36799999999999999999999999999999985 1 22222223333 347889999999999888775
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC---C
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA---T 163 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~---~ 163 (298)
.+|++||+++... +.+...+++ .+.+.+. -++|| . |..+... .
T Consensus 77 --~~d~vi~~a~~~~-------------------~~~~~~l~~----aa~~~g~-------v~~~v-~-S~~g~~~~~~~ 122 (321)
T 3c1o_A 77 --QVDIVISALPFPM-------------------ISSQIHIIN----AIKAAGN-------IKRFL-P-SDFGCEEDRIK 122 (321)
T ss_dssp --TCSEEEECCCGGG-------------------SGGGHHHHH----HHHHHCC-------CCEEE-C-SCCSSCGGGCC
T ss_pred --CCCEEEECCCccc-------------------hhhHHHHHH----HHHHhCC-------ccEEe-c-cccccCccccc
Confidence 5999999998521 233334444 4443310 14566 2 3333111 1
Q ss_pred ---CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCccc---C---cCChHHHHHHHhhhccCCCCCCHH
Q 022386 164 ---WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV---S---KLAPEEIRSKATDYMAAYKFGEKW 234 (298)
Q Consensus 164 ---~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~ 234 (298)
+....| .+|.+++.+++. . |++++.|.||++...... . ...................+.+++
T Consensus 123 ~~~p~~~~y-~sK~~~e~~~~~----~----~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 193 (321)
T 3c1o_A 123 PLPPFESVL-EKKRIIRRAIEA----A----ALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEE 193 (321)
T ss_dssp CCHHHHHHH-HHHHHHHHHHHH----H----TCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHH
T ss_pred cCCCcchHH-HHHHHHHHHHHH----c----CCCeEEEEeceeccccccccccccccccccCceEEecCCCcceeEeeHH
Confidence 124579 999999888763 2 578888899988532100 0 000000000000111123466899
Q ss_pred HHHHHHHHhcCCCCCCccccEEEeCC-CCCC
Q 022386 235 DIAMAALYLASDAGKYVNGNTLIVDG-GNWL 264 (298)
Q Consensus 235 dva~~~~~L~s~~~~~~~G~~i~~dg-G~~~ 264 (298)
|+|+++..++.++. ..|+.+.+.| |..+
T Consensus 194 Dva~~~~~~l~~~~--~~g~~~~~~g~~~~~ 222 (321)
T 3c1o_A 194 DIAKYTIKVACDPR--CCNRIVIYRPPKNII 222 (321)
T ss_dssp HHHHHHHHHHHCGG--GTTEEEECCCGGGEE
T ss_pred HHHHHHHHHHhCcc--ccCeEEEEeCCCCcc
Confidence 99999999997643 2477788876 4444
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.64 E-value=2.2e-15 Score=140.90 Aligned_cols=206 Identities=16% Similarity=0.070 Sum_probs=137.6
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
++++|||||+|+||.++++.|+++|++|++++|+.... ..+.+|+.+. . .+.+.++|
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~--------------~~v~~d~~~~--~-------~~~l~~~D 203 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP--------------GKRFWDPLNP--A-------SDLLDGAD 203 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT--------------TCEECCTTSC--C-------TTTTTTCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc--------------cceeecccch--h-------HHhcCCCC
Confidence 67999999999999999999999999999999986531 1256787642 1 22345899
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC---------
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA--------- 162 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~--------- 162 (298)
++||+|+..... ..+.+.....+++|+.++.++++++. ...+ .+++|++||...+..
T Consensus 204 ~Vih~A~~~~~~---~~~~~~~~~~~~~Nv~gt~~ll~a~a---~~~~--------~~r~V~~SS~~vyg~~~~~~~~~E 269 (516)
T 3oh8_A 204 VLVHLAGEPIFG---RFNDSHKEAIRESRVLPTKFLAELVA---ESTQ--------CTTMISASAVGFYGHDRGDEILTE 269 (516)
T ss_dssp EEEECCCC--------CCGGGHHHHHHHTHHHHHHHHHHHH---HCSS--------CCEEEEEEEGGGGCSEEEEEEECT
T ss_pred EEEECCCCcccc---ccchhHHHHHHHHHHHHHHHHHHHHH---hcCC--------CCEEEEeCcceEecCCCCCCccCC
Confidence 999999964332 23445677889999999999999754 2222 467999999765431
Q ss_pred --CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhh--------ccCCCCCC
Q 022386 163 --TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY--------MAAYKFGE 232 (298)
Q Consensus 163 --~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 232 (298)
..+...|+.+|...+.+.+.. . ..|++++.+.||.+.++.. . ....+...+... .....+..
T Consensus 270 ~~~~~~~~y~~~~~~~E~~~~~~----~-~~gi~~~ilRp~~v~Gp~~-~--~~~~~~~~~~~g~~~~~g~g~~~~~~i~ 341 (516)
T 3oh8_A 270 ESESGDDFLAEVCRDWEHATAPA----S-DAGKRVAFIRTGVALSGRG-G--MLPLLKTLFSTGLGGKFGDGTSWFSWIA 341 (516)
T ss_dssp TSCCCSSHHHHHHHHHHHTTHHH----H-HTTCEEEEEEECEEEBTTB-S--HHHHHHHTTC---CCCCTTSCCEECEEE
T ss_pred CCCCCcChHHHHHHHHHHHHHHH----H-hCCCCEEEEEeeEEECCCC-C--hHHHHHHHHHhCCCcccCCCCceEceEe
Confidence 113446788887776665432 2 3489999999999987642 1 011111111111 11124567
Q ss_pred HHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 233 KWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 233 ~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
.+|+++++..++.... ..| .+++.++..++
T Consensus 342 v~Dva~ai~~~l~~~~--~~g-~~ni~~~~~~s 371 (516)
T 3oh8_A 342 IDDLTDIYYRAIVDAQ--ISG-PINAVAPNPVS 371 (516)
T ss_dssp HHHHHHHHHHHHHCTT--CCE-EEEESCSCCEE
T ss_pred HHHHHHHHHHHHhCcc--cCC-cEEEECCCCCC
Confidence 8999999999996543 334 67777775543
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=5.9e-15 Score=129.38 Aligned_cols=201 Identities=16% Similarity=0.156 Sum_probs=122.9
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
++++||||+|+||.+++++|+++|++|++++|+.+...+..+.+.. ..+.++.+|++|.+++.++++ .+|+
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~--~~v~~v~~Dl~d~~~l~~a~~-------~~d~ 82 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS--LGAIIVKGELDEHEKLVELMK-------KVDV 82 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH--TTCEEEECCTTCHHHHHHHHT-------TCSE
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc--CCCEEEEecCCCHHHHHHHHc-------CCCE
Confidence 6899999999999999999999999999999986422222233333 247889999999999888775 6999
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC-----CCCch
Q 022386 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-----TWYQI 167 (298)
Q Consensus 93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~-----~~~~~ 167 (298)
+||+++... +.+...++ +.+++.+. -+++|+ |+...... .+...
T Consensus 83 vi~~a~~~~-------------------~~~~~~l~----~aa~~~g~-------v~~~v~-S~~g~~~~~~~~~~p~~~ 131 (318)
T 2r6j_A 83 VISALAFPQ-------------------ILDQFKIL----EAIKVAGN-------IKRFLP-SDFGVEEDRINALPPFEA 131 (318)
T ss_dssp EEECCCGGG-------------------STTHHHHH----HHHHHHCC-------CCEEEC-SCCSSCTTTCCCCHHHHH
T ss_pred EEECCchhh-------------------hHHHHHHH----HHHHhcCC-------CCEEEe-eccccCcccccCCCCcch
Confidence 999998421 22333333 34443310 145663 33221111 11235
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCccc---CcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhc
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV---SKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~ 244 (298)
.| .+|.+++.+.+. .|++++.+.||++...... ....................+.+++|+++++..++
T Consensus 132 ~y-~sK~~~e~~~~~--------~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l 202 (318)
T 2r6j_A 132 LI-ERKRMIRRAIEE--------ANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVA 202 (318)
T ss_dssp HH-HHHHHHHHHHHH--------TTCCBEEEECCEEHHHHHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHT
T ss_pred hH-HHHHHHHHHHHh--------cCCCeEEEEcceehhhhhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHh
Confidence 68 999998877753 2688888999987532100 00000000000000111223568999999999999
Q ss_pred CCCCCCccccEEEeCC-CCCC
Q 022386 245 SDAGKYVNGNTLIVDG-GNWL 264 (298)
Q Consensus 245 s~~~~~~~G~~i~~dg-G~~~ 264 (298)
..+. ..|+.+.+.| |..+
T Consensus 203 ~~~~--~~~~~~~~~g~~~~~ 221 (318)
T 2r6j_A 203 TDPR--ALNRVVIYRPSTNII 221 (318)
T ss_dssp TCGG--GTTEEEECCCGGGEE
T ss_pred cCcc--ccCeEEEecCCCCcc
Confidence 7642 2366777765 3443
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.60 E-value=2.8e-15 Score=130.67 Aligned_cols=199 Identities=15% Similarity=0.067 Sum_probs=122.9
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhH-----HHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-----LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.++++||||||+||.++++.|+++|++|++++|+... ..+....+. ...+.++.+|++|.+++.++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d~~~l~~~~~----- 76 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDHASLVEAVK----- 76 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH--TTTCEEECCCTTCHHHHHHHHH-----
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHH--hCCCEEEEeccCCHHHHHHHHc-----
Confidence 4689999999999999999999999999999998431 111222332 2357889999999999888776
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC----
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA---- 162 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~---- 162 (298)
++|++||+++... +.+...++++ +++.+. -+++|+ |+......
T Consensus 77 --~~d~vi~~a~~~~-------------------~~~~~~l~~a----a~~~g~-------v~~~v~-S~~g~~~~~~~~ 123 (308)
T 1qyc_A 77 --NVDVVISTVGSLQ-------------------IESQVNIIKA----IKEVGT-------VKRFFP-SEFGNDVDNVHA 123 (308)
T ss_dssp --TCSEEEECCCGGG-------------------SGGGHHHHHH----HHHHCC-------CSEEEC-SCCSSCTTSCCC
T ss_pred --CCCEEEECCcchh-------------------hhhHHHHHHH----HHhcCC-------CceEee-cccccCcccccc
Confidence 5999999998421 2233334443 333210 245663 43321111
Q ss_pred -CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC------ChHHHHHHHhhhccCCCCCCHHH
Q 022386 163 -TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL------APEEIRSKATDYMAAYKFGEKWD 235 (298)
Q Consensus 163 -~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~d 235 (298)
.+....| .+|.+++.+++. . |++++.+.||++.+....... .................+.+++|
T Consensus 124 ~~p~~~~y-~sK~~~e~~~~~----~----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 194 (308)
T 1qyc_A 124 VEPAKSVF-EVKAKVRRAIEA----E----GIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEED 194 (308)
T ss_dssp CTTHHHHH-HHHHHHHHHHHH----H----TCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHH
T ss_pred CCcchhHH-HHHHHHHHHHHh----c----CCCeEEEEeceeccccccccccccccCCCCCceEEecCCCceEEEecHHH
Confidence 1224578 999998887763 2 578888899987542111000 00000000000111223568899
Q ss_pred HHHHHHHhcCCCCCCccccEEEeCCC
Q 022386 236 IAMAALYLASDAGKYVNGNTLIVDGG 261 (298)
Q Consensus 236 va~~~~~L~s~~~~~~~G~~i~~dgG 261 (298)
+++++..++.++. ..|+.+.+.|.
T Consensus 195 va~~~~~~l~~~~--~~~~~~~~~g~ 218 (308)
T 1qyc_A 195 IGTFTIKAVDDPR--TLNKTLYLRLP 218 (308)
T ss_dssp HHHHHHTTSSCGG--GTTEEEECCCG
T ss_pred HHHHHHHHHhCcc--ccCeEEEEeCC
Confidence 9999999997542 23667777653
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.6e-12 Score=112.88 Aligned_cols=218 Identities=15% Similarity=0.083 Sum_probs=136.2
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l 93 (298)
.||||||||.||.+++++|+++|++|+++.|+... .+ +..| .+ ..+.+..+|.+
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~------------~~---~~~~-----~~------~~~~l~~~d~v 55 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP------------GR---ITWD-----EL------AASGLPSCDAA 55 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT------------TE---EEHH-----HH------HHHCCCSCSEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc------------Ce---eecc-----hh------hHhhccCCCEE
Confidence 59999999999999999999999999999997531 11 1221 11 11234689999
Q ss_pred EECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC----------
Q 022386 94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT---------- 163 (298)
Q Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~---------- 163 (298)
||.|+..........+.......++.|+.++..+.+++...-.+ ...+|+.||...+...
T Consensus 56 ihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~----------~~~~i~~Ss~~vyg~~~~~~~~E~~p 125 (298)
T 4b4o_A 56 VNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQP----------PKAWVLVTGVAYYQPSLTAEYDEDSP 125 (298)
T ss_dssp EECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSC----------CSEEEEEEEGGGSCCCSSCCBCTTCC
T ss_pred EEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCC----------ceEEEEEeeeeeecCCCCCcccccCC
Confidence 99998543333344566777888899999888877765532211 3457777776554321
Q ss_pred -CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHh--------hhccCCCCCCHH
Q 022386 164 -WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT--------DYMAAYKFGEKW 234 (298)
Q Consensus 164 -~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~ 234 (298)
.+...|+..|...+.. .... ..++++..+.||.+..+.... -........ .......+...+
T Consensus 126 ~~~~~~~~~~~~~~e~~-----~~~~-~~~~~~~~~r~~~v~g~~~~~---~~~~~~~~~~~~~~~~g~g~~~~~~ihv~ 196 (298)
T 4b4o_A 126 GGDFDFFSNLVTKWEAA-----ARLP-GDSTRQVVVRSGVVLGRGGGA---MGHMLLPFRLGLGGPIGSGHQFFPWIHIG 196 (298)
T ss_dssp CSCSSHHHHHHHHHHHH-----HCCS-SSSSEEEEEEECEEECTTSHH---HHHHHHHHHTTCCCCBTTSCSBCCEEEHH
T ss_pred ccccchhHHHHHHHHHH-----HHhh-ccCCceeeeeeeeEEcCCCCc---hhHHHHHHhcCCcceecccCceeecCcHH
Confidence 1123344444333321 1222 568999999999998653210 011111111 111223356789
Q ss_pred HHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhhh
Q 022386 235 DIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVER 284 (298)
Q Consensus 235 dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~~ 284 (298)
|+++++.+++..+. ..| .+++.++..++ .+.+.+.+.+.+.+
T Consensus 197 Dva~a~~~~~~~~~--~~g-~yn~~~~~~~t-----~~e~~~~ia~~lgr 238 (298)
T 4b4o_A 197 DLAGILTHALEANH--VHG-VLNGVAPSSAT-----NAEFAQTFGAALGR 238 (298)
T ss_dssp HHHHHHHHHHHCTT--CCE-EEEESCSCCCB-----HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhCCC--CCC-eEEEECCCccC-----HHHHHHHHHHHhCc
Confidence 99999999886532 345 78888776665 46666666666654
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=1e-11 Score=107.34 Aligned_cols=110 Identities=15% Similarity=0.251 Sum_probs=81.4
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
.+++||+++||||+||+|++++..|+++|++|++++|+.++.+++.+++... ..+.++.+|++++++++++++
T Consensus 115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~-~~~~~~~~D~~~~~~~~~~~~------ 187 (287)
T 1lu9_A 115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAVK------ 187 (287)
T ss_dssp SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHTT------
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEecCCCHHHHHHHHH------
Confidence 3578999999999999999999999999999999999988888887777543 235677899999998877665
Q ss_pred CCccEEEECCCCCCC-CCCCCCCH-HHHHHHHHhhhHHHH
Q 022386 88 GKLDILVNAAAGNFL-VPAEDLSP-NGFRTVIEIDSVGTF 125 (298)
Q Consensus 88 ~~id~li~~ag~~~~-~~~~~~~~-~~~~~~~~~n~~~~~ 125 (298)
.+|++|||+|.... .+..+.+. +.+...+++|+.+++
T Consensus 188 -~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~ 226 (287)
T 1lu9_A 188 -GAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL 226 (287)
T ss_dssp -TCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred -hCCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence 58999999985321 11111111 233345566666554
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=1.4e-10 Score=101.95 Aligned_cols=150 Identities=11% Similarity=0.130 Sum_probs=102.3
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCC-------cEEEEcCCh--hHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHH
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGA-------AIAIMGRRK--TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~-------~Vv~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
++++||||+|+||.+++..|+++|. .|+++++.. +..+....++.+....+ + .|+++.+++...+
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~--~-~di~~~~~~~~a~--- 78 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPL--L-AGLEATDDPKVAF--- 78 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTT--E-EEEEEESCHHHHT---
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccc--c-CCeEeccChHHHh---
Confidence 4799999999999999999999996 799999874 22333333444322122 2 4665543333333
Q ss_pred HHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc----
Q 022386 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH---- 159 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~---- 159 (298)
...|++||.||.... + ..++ .+.++.|+.++..+++++..+- .. ..+++++|+...
T Consensus 79 ----~~~D~Vih~Ag~~~~-~--~~~~---~~~~~~Nv~~t~~l~~a~~~~~--~~--------~~~vvv~snp~~~~~~ 138 (327)
T 1y7t_A 79 ----KDADYALLVGAAPRK-A--GMER---RDLLQVNGKIFTEQGRALAEVA--KK--------DVKVLVVGNPANTNAL 138 (327)
T ss_dssp ----TTCSEEEECCCCCCC-T--TCCH---HHHHHHHHHHHHHHHHHHHHHS--CT--------TCEEEECSSSHHHHHH
T ss_pred ----CCCCEEEECCCcCCC-C--CCCH---HHHHHHHHHHHHHHHHHHHhhc--CC--------CeEEEEeCCchhhhHH
Confidence 379999999996432 1 2233 4578999999999999887652 01 356888887652
Q ss_pred ----cc-CCCCchhhHHHHHHHHHHHHHHHHHhc
Q 022386 160 ----YT-ATWYQIHVSAAKAAVDSITRSLALEWG 188 (298)
Q Consensus 160 ----~~-~~~~~~~Y~~sK~a~~~l~~~la~e~~ 188 (298)
.. +.++...|+.+|...+.+.+.++..++
T Consensus 139 ~~~~~~~~~~p~~~yg~tkl~~er~~~~~a~~~g 172 (327)
T 1y7t_A 139 IAYKNAPGLNPRNFTAMTRLDHNRAKAQLAKKTG 172 (327)
T ss_dssp HHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred HHHHHcCCCChhheeccchHHHHHHHHHHHHHhC
Confidence 11 233455699999999999998888764
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=1.9e-10 Score=94.92 Aligned_cols=115 Identities=15% Similarity=0.150 Sum_probs=75.0
Q ss_pred CCCCcEEEEecC----------------CchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCC
Q 022386 9 ILKGKVALLTGG----------------GSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72 (298)
Q Consensus 9 ~l~gk~~lVtG~----------------t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~ 72 (298)
+|+||++||||| |||+|+++|+.|+++|++|++++++.. ++ ....+. .+|+++
T Consensus 5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~--------~~~g~~--~~dv~~ 73 (226)
T 1u7z_A 5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP--------TPPFVK--RVDVMT 73 (226)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC--------CCTTEE--EEECCS
T ss_pred CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc--------cCCCCe--EEccCc
Confidence 589999999999 699999999999999999999887642 11 011122 467877
Q ss_pred HHHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHH--HHhhhHHHHHHHHHHHHHHHhc
Q 022386 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV--IEIDSVGTFIMCHEALKYLKKG 138 (298)
Q Consensus 73 ~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~--~~~n~~~~~~l~~~~~~~~~~~ 138 (298)
. +.+++.+.+.++++|++|||||+....+.. ...+.+.+. -+.++.-.+....-+++.+.+.
T Consensus 74 ~---~~~~~~v~~~~~~~Dili~~Aav~d~~p~~-~~~~KIkk~~~~~~~l~l~L~~~pdIL~~l~~~ 137 (226)
T 1u7z_A 74 A---LEMEAAVNASVQQQNIFIGCAAVADYRAAT-VAPEKIKKQATQGDELTIKMVKNPDIVAGVAAL 137 (226)
T ss_dssp H---HHHHHHHHHHGGGCSEEEECCBCCSEEESS-CCSSCC-------CEEEEEEEECCCHHHHHHHC
T ss_pred H---HHHHHHHHHhcCCCCEEEECCcccCCCCcc-CChHHhccccccCCceEEEEeecHHHHHHHHhh
Confidence 4 456677788889999999999976433332 122222220 0223333444455666666653
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=98.91 E-value=1.5e-09 Score=89.74 Aligned_cols=91 Identities=11% Similarity=0.131 Sum_probs=65.7
Q ss_pred CCcEEEEecC----------------CchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHH
Q 022386 11 KGKVALLTGG----------------GSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRE 74 (298)
Q Consensus 11 ~gk~~lVtG~----------------t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~ 74 (298)
+||++||||| ||++|.++|++|+++|+.|++++++... .. .....+..+ |+.
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~-~~------~~~~~~~~~--~v~--- 69 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRAL-KP------EPHPNLSIR--EIT--- 69 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSC-CC------CCCTTEEEE--ECC---
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccc-cc------cCCCCeEEE--EHh---
Confidence 5899999999 7889999999999999999999997531 10 001223333 343
Q ss_pred HHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHH
Q 022386 75 DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGF 113 (298)
Q Consensus 75 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~ 113 (298)
+++++++.+.+.++++|++|+||+.....+....+.+.+
T Consensus 70 s~~em~~~v~~~~~~~Dili~aAAvsD~~p~~~~~~e~~ 108 (232)
T 2gk4_A 70 NTKDLLIEMQERVQDYQVLIHSMAVSDYTPVYMTGLEEV 108 (232)
T ss_dssp SHHHHHHHHHHHGGGCSEEEECSBCCSEEEEEEEEHHHH
T ss_pred HHHHHHHHHHHhcCCCCEEEEcCccccccchhhcchhhh
Confidence 677788888888899999999999765554443334443
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=98.88 E-value=1.3e-08 Score=75.07 Aligned_cols=74 Identities=14% Similarity=0.153 Sum_probs=61.5
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcC-CcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
.+++++|+|+ |++|.++++.|.++| ++|++++|+.++.+... ...+.++.+|+++.+++.++++ .
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~-------~ 69 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN------RMGVATKQVDAKDEAGLAKALG-------G 69 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH------TTTCEEEECCTTCHHHHHHHTT-------T
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH------hCCCcEEEecCCCHHHHHHHHc-------C
Confidence 3579999999 999999999999999 89999999977655443 2346778899999887777653 7
Q ss_pred ccEEEECCC
Q 022386 90 LDILVNAAA 98 (298)
Q Consensus 90 id~li~~ag 98 (298)
+|++|++++
T Consensus 70 ~d~vi~~~~ 78 (118)
T 3ic5_A 70 FDAVISAAP 78 (118)
T ss_dssp CSEEEECSC
T ss_pred CCEEEECCC
Confidence 999999996
|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
Probab=98.83 E-value=2.8e-09 Score=83.54 Aligned_cols=77 Identities=18% Similarity=0.124 Sum_probs=65.3
Q ss_pred chhHHHHHHHHHHcCCcEEEEcCChhHHH---HHHHHHHhCCCCeEEEEccCCCH--HHHHHHHHHHHHHhCCccEEEEC
Q 022386 22 SGIGFEISLQLGKHGAAIAIMGRRKTVLR---SAVAALHSLGIPAIGLEGDVRKR--EDAVRVVESTINHFGKLDILVNA 96 (298)
Q Consensus 22 ~giG~~ia~~l~~~G~~Vv~~~r~~~~~~---~~~~~~~~~~~~~~~~~~Dls~~--~~~~~~~~~~~~~~~~id~li~~ 96 (298)
+-++.++++.|++.|++|++..|+..... +..+.+.+.|.++..+++|++++ ++++++++.+.+.+|+ |+||||
T Consensus 26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVnn 104 (157)
T 3gxh_A 26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVHC 104 (157)
T ss_dssp BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEEC
T ss_pred CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEEC
Confidence 45789999999999999999988754432 23556667788888999999999 9999999999998999 999999
Q ss_pred CCC
Q 022386 97 AAG 99 (298)
Q Consensus 97 ag~ 99 (298)
||+
T Consensus 105 Agg 107 (157)
T 3gxh_A 105 LAN 107 (157)
T ss_dssp SBS
T ss_pred CCC
Confidence 985
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=98.72 E-value=9.8e-08 Score=86.22 Aligned_cols=81 Identities=17% Similarity=0.211 Sum_probs=70.5
Q ss_pred cEEEEecCCchhHHHHHHHHHHcC---CcEEEEcCChhHHHHHHHHHHhCC-CCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHG---AAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G---~~Vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
++++|+|+ |++|+++++.|+++| ..|++++|+.++++++.+.+...+ .++.++.+|+++.++++++++..
T Consensus 2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~----- 75 (405)
T 4ina_A 2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV----- 75 (405)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-----
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-----
Confidence 47899999 899999999999998 389999999999988888886542 46888999999999999998865
Q ss_pred CccEEEECCCC
Q 022386 89 KLDILVNAAAG 99 (298)
Q Consensus 89 ~id~li~~ag~ 99 (298)
++|++||+++.
T Consensus 76 ~~DvVin~ag~ 86 (405)
T 4ina_A 76 KPQIVLNIALP 86 (405)
T ss_dssp CCSEEEECSCG
T ss_pred CCCEEEECCCc
Confidence 69999999973
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=98.57 E-value=2.1e-08 Score=86.45 Aligned_cols=81 Identities=20% Similarity=0.231 Sum_probs=60.7
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
++++|+++|||++ |+|++++..|++.| +|++++|+.++.+++.+++...+.....+.+|+++. .+.++
T Consensus 125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~----------~~~~~ 192 (287)
T 1nvt_A 125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL----------DVDLD 192 (287)
T ss_dssp CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT----------TCCCT
T ss_pred CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH----------HHhhC
Confidence 5789999999997 99999999999999 999999998888888777654211000122344441 34467
Q ss_pred CccEEEECCCCCC
Q 022386 89 KLDILVNAAAGNF 101 (298)
Q Consensus 89 ~id~li~~ag~~~ 101 (298)
++|++|||++...
T Consensus 193 ~~DilVn~ag~~~ 205 (287)
T 1nvt_A 193 GVDIIINATPIGM 205 (287)
T ss_dssp TCCEEEECSCTTC
T ss_pred CCCEEEECCCCCC
Confidence 8999999998643
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=98.55 E-value=1.2e-07 Score=86.65 Aligned_cols=77 Identities=16% Similarity=0.111 Sum_probs=62.2
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
++|+++|+| +|++|+++++.|++.|++|++++|+.++.+++.+.+ ..+..+.+|+++.+++.++++ .+
T Consensus 2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~----~~~~~~~~Dv~d~~~l~~~l~-------~~ 69 (450)
T 1ff9_A 2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV----QHSTPISLDVNDDAALDAEVA-------KH 69 (450)
T ss_dssp CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC----TTEEEEECCTTCHHHHHHHHT-------TS
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc----CCceEEEeecCCHHHHHHHHc-------CC
Confidence 578999997 799999999999999999999999976554433221 246788899999988877663 79
Q ss_pred cEEEECCCC
Q 022386 91 DILVNAAAG 99 (298)
Q Consensus 91 d~li~~ag~ 99 (298)
|++||+++.
T Consensus 70 DvVIn~a~~ 78 (450)
T 1ff9_A 70 DLVISLIPY 78 (450)
T ss_dssp SEEEECCC-
T ss_pred cEEEECCcc
Confidence 999999985
|
| >2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=1.8e-08 Score=94.04 Aligned_cols=100 Identities=17% Similarity=0.194 Sum_probs=65.5
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
.++++|+++|||| ||+|++++..|++.|++|++++|+.++.+++.+.+ +.++. ++.+ ++.+ ..
T Consensus 360 ~~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~---~~~~~----~~~d---l~~~------~~ 422 (523)
T 2o7s_A 360 SPLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAI---GGKAL----SLTD---LDNY------HP 422 (523)
T ss_dssp ------CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHT---TC-CE----ETTT---TTTC--------
T ss_pred cccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCcee----eHHH---hhhc------cc
Confidence 3578999999999 59999999999999999999999988777776655 22222 2222 1100 11
Q ss_pred CCccEEEECCCCCCC-----CCCCCCCHHHHHHHHHhhhHHH
Q 022386 88 GKLDILVNAAAGNFL-----VPAEDLSPNGFRTVIEIDSVGT 124 (298)
Q Consensus 88 ~~id~li~~ag~~~~-----~~~~~~~~~~~~~~~~~n~~~~ 124 (298)
+.+|++|||+|.... .++.+.+.+.|...+++|+.+.
T Consensus 423 ~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~ 464 (523)
T 2o7s_A 423 EDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPR 464 (523)
T ss_dssp CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSS
T ss_pred cCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCc
Confidence 358999999996432 3455555667777888888765
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.52 E-value=1.5e-07 Score=83.90 Aligned_cols=107 Identities=15% Similarity=0.209 Sum_probs=74.7
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
.+.+++++|+|+ |++|+++++.+...|++|++++++.++++...+.+ +.. +.+|.++.+++++++.
T Consensus 163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~---g~~---~~~~~~~~~~l~~~~~------- 228 (369)
T 2eez_A 163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF---GGR---VITLTATEANIKKSVQ------- 228 (369)
T ss_dssp BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TTS---EEEEECCHHHHHHHHH-------
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc---Cce---EEEecCCHHHHHHHHh-------
Confidence 588999999999 99999999999999999999999987665544322 333 4567788877766653
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccc
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~ 158 (298)
..|++|++++..... .+..+.+..++.|++ ++.||++++..
T Consensus 229 ~~DvVi~~~g~~~~~-------------------~~~li~~~~l~~mk~----------gg~iV~v~~~~ 269 (369)
T 2eez_A 229 HADLLIGAVLVPGAK-------------------APKLVTRDMLSLMKE----------GAVIVDVAVDQ 269 (369)
T ss_dssp HCSEEEECCC--------------------------CCSCHHHHTTSCT----------TCEEEECC---
T ss_pred CCCEEEECCCCCccc-------------------cchhHHHHHHHhhcC----------CCEEEEEecCC
Confidence 689999999853210 112334566666643 58899998753
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=98.51 E-value=2.5e-07 Score=74.97 Aligned_cols=79 Identities=23% Similarity=0.236 Sum_probs=57.2
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|++++||||++|||.++++.+...|++|++++++.++.+.. .+.+.+. .+|.++.+..+.+.+... .+++
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~----~~~g~~~---~~d~~~~~~~~~~~~~~~--~~~~ 108 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML----SRLGVEY---VGDSRSVDFADEILELTD--GYGV 108 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH----HTTCCSE---EEETTCSTHHHHHHHHTT--TCCE
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCCCE---EeeCCcHHHHHHHHHHhC--CCCC
Confidence 589999999999999999999999999999999987654432 3334332 247776554444333221 1369
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|++|+|+|
T Consensus 109 D~vi~~~g 116 (198)
T 1pqw_A 109 DVVLNSLA 116 (198)
T ss_dssp EEEEECCC
T ss_pred eEEEECCc
Confidence 99999997
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=98.50 E-value=1.6e-07 Score=82.47 Aligned_cols=79 Identities=8% Similarity=0.127 Sum_probs=60.1
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|++++|||+++|||.++++.+...|++|++++++.++++.. + +.+.. ..+|.++.+++.+.+.++.. +++
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~---~~g~~---~~~d~~~~~~~~~~~~~~~~--~~~ 215 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-K---QIGFD---AAFNYKTVNSLEEALKKASP--DGY 215 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-H---HTTCS---EEEETTSCSCHHHHHHHHCT--TCE
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-H---hcCCc---EEEecCCHHHHHHHHHHHhC--CCC
Confidence 589999999999999999999999999999999987665544 3 33433 23477764455555554433 589
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|++|+|+|
T Consensus 216 d~vi~~~g 223 (333)
T 1v3u_A 216 DCYFDNVG 223 (333)
T ss_dssp EEEEESSC
T ss_pred eEEEECCC
Confidence 99999998
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=98.49 E-value=1.2e-06 Score=76.09 Aligned_cols=83 Identities=20% Similarity=0.235 Sum_probs=64.6
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCC---hhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR---KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~---~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
.+++||+++|+|+ ||+|++++..|++.|+ +|+++.|+ .++.+++++++....+ +....+++.+.+++.+.+.
T Consensus 150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~-~~~~~~~~~~~~~l~~~l~-- 225 (315)
T 3tnl_A 150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTD-CKAQLFDIEDHEQLRKEIA-- 225 (315)
T ss_dssp CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSS-CEEEEEETTCHHHHHHHHH--
T ss_pred CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcC-CceEEeccchHHHHHhhhc--
Confidence 4688999999998 7999999999999999 89999999 8888888888765422 2333456777665554433
Q ss_pred HHHhCCccEEEECCCC
Q 022386 84 INHFGKLDILVNAAAG 99 (298)
Q Consensus 84 ~~~~~~id~li~~ag~ 99 (298)
..|++||+...
T Consensus 226 -----~aDiIINaTp~ 236 (315)
T 3tnl_A 226 -----ESVIFTNATGV 236 (315)
T ss_dssp -----TCSEEEECSST
T ss_pred -----CCCEEEECccC
Confidence 68999999864
|
| >3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=4e-10 Score=102.68 Aligned_cols=45 Identities=24% Similarity=0.347 Sum_probs=39.3
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAV 53 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~ 53 (298)
.+|.||+++|||++ +||+++|+.|...|++|++++++.....+..
T Consensus 261 ~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa 305 (488)
T 3ond_A 261 VMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQAT 305 (488)
T ss_dssp CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred CcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence 36899999999987 9999999999999999999999876554443
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.39 E-value=9.3e-07 Score=81.07 Aligned_cols=80 Identities=14% Similarity=0.124 Sum_probs=62.2
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHc-CCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
..++++++++|+|+ |++|++++..|++. |++|++++|+.++.+++.+. ..+..+.+|+++.+++.++++
T Consensus 18 ~~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~-----~~~~~~~~D~~d~~~l~~~l~---- 87 (467)
T 2axq_A 18 EGRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP-----SGSKAISLDVTDDSALDKVLA---- 87 (467)
T ss_dssp -----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG-----GTCEEEECCTTCHHHHHHHHH----
T ss_pred ccCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh-----cCCcEEEEecCCHHHHHHHHc----
Confidence 34678899999997 99999999999998 78999999998766655433 135667899999988777664
Q ss_pred HhCCccEEEECCCC
Q 022386 86 HFGKLDILVNAAAG 99 (298)
Q Consensus 86 ~~~~id~li~~ag~ 99 (298)
.+|++||+++.
T Consensus 88 ---~~DvVIn~tp~ 98 (467)
T 2axq_A 88 ---DNDVVISLIPY 98 (467)
T ss_dssp ---TSSEEEECSCG
T ss_pred ---CCCEEEECCch
Confidence 69999999984
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.36 E-value=1.7e-06 Score=66.02 Aligned_cols=76 Identities=9% Similarity=0.082 Sum_probs=59.1
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
+.++.++|+|+ |.+|.++++.|.++|++|++++++.+..+...+ .+ +.++.+|.++++.++++ ....
T Consensus 4 ~~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~~--~~~~~gd~~~~~~l~~~------~~~~ 70 (141)
T 3llv_A 4 NGRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----EG--FDAVIADPTDESFYRSL------DLEG 70 (141)
T ss_dssp --CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TT--CEEEECCTTCHHHHHHS------CCTT
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----CC--CcEEECCCCCHHHHHhC------Cccc
Confidence 44578999998 779999999999999999999999766554432 22 56788999999877654 2247
Q ss_pred ccEEEECCC
Q 022386 90 LDILVNAAA 98 (298)
Q Consensus 90 id~li~~ag 98 (298)
.|++|.+.+
T Consensus 71 ~d~vi~~~~ 79 (141)
T 3llv_A 71 VSAVLITGS 79 (141)
T ss_dssp CSEEEECCS
T ss_pred CCEEEEecC
Confidence 899998776
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=98.35 E-value=1.2e-06 Score=74.61 Aligned_cols=76 Identities=20% Similarity=0.263 Sum_probs=58.5
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.+...+ .+. .+|+ +++ .+ +
T Consensus 116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~-~~~--~~~~---~~~-------~~--~ 179 (271)
T 1nyt_A 116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-SIQ--ALSM---DEL-------EG--H 179 (271)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-SEE--ECCS---GGG-------TT--C
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccC-Cee--EecH---HHh-------cc--C
Confidence 578999999998 799999999999999999999999888888777664432 232 2333 111 11 6
Q ss_pred CccEEEECCCCC
Q 022386 89 KLDILVNAAAGN 100 (298)
Q Consensus 89 ~id~li~~ag~~ 100 (298)
.+|++||+++..
T Consensus 180 ~~DivVn~t~~~ 191 (271)
T 1nyt_A 180 EFDLIINATSSG 191 (271)
T ss_dssp CCSEEEECCSCG
T ss_pred CCCEEEECCCCC
Confidence 899999999864
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=4.9e-07 Score=68.89 Aligned_cols=77 Identities=12% Similarity=0.181 Sum_probs=56.9
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
++++++++|+|+ |++|..+++.|.+.|++|++++++.+..+. +.+.+ ...+.+|.++.+.++++ ...
T Consensus 3 ~~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~----~~~~~--~~~~~~d~~~~~~l~~~------~~~ 69 (144)
T 2hmt_A 3 RIKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNA----YASYA--THAVIANATEENELLSL------GIR 69 (144)
T ss_dssp ---CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHT----TTTTC--SEEEECCTTCHHHHHTT------TGG
T ss_pred CCcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HHHhC--CEEEEeCCCCHHHHHhc------CCC
Confidence 466788999998 999999999999999999999998654332 22222 35677899987655443 134
Q ss_pred CccEEEECCC
Q 022386 89 KLDILVNAAA 98 (298)
Q Consensus 89 ~id~li~~ag 98 (298)
+.|++|++++
T Consensus 70 ~~d~vi~~~~ 79 (144)
T 2hmt_A 70 NFEYVIVAIG 79 (144)
T ss_dssp GCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 7999999987
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.29 E-value=2e-06 Score=76.02 Aligned_cols=79 Identities=16% Similarity=0.135 Sum_probs=60.3
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|++++|+|+++|+|.++++.+...|++|++++++.++.+.. .+.+.+ ..+|.++.+++.+.+.++... ++
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~----~~~g~~---~~~d~~~~~~~~~~~~~~~~~--~~ 239 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF----RSIGGE---VFIDFTKEKDIVGAVLKATDG--GA 239 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH----HHTTCC---EEEETTTCSCHHHHHHHHHTS--CE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH----HHcCCc---eEEecCccHhHHHHHHHHhCC--CC
Confidence 589999999999999999999999999999999987765432 233433 224877555666666655433 79
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|++|+++|
T Consensus 240 D~vi~~~g 247 (347)
T 2hcy_A 240 HGVINVSV 247 (347)
T ss_dssp EEEEECSS
T ss_pred CEEEECCC
Confidence 99999998
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=98.23 E-value=5.6e-06 Score=70.89 Aligned_cols=80 Identities=18% Similarity=0.173 Sum_probs=61.0
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++++.+......+.....++.+. .+.+.
T Consensus 124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l---~~~l~------ 193 (283)
T 3jyo_A 124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGI---EDVIA------ 193 (283)
T ss_dssp TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTH---HHHHH------
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHH---HHHHh------
Confidence 688999999998 7999999999999999 699999999998888888875433333333444333 22222
Q ss_pred CCccEEEECCCC
Q 022386 88 GKLDILVNAAAG 99 (298)
Q Consensus 88 ~~id~li~~ag~ 99 (298)
..|++||+...
T Consensus 194 -~~DiVInaTp~ 204 (283)
T 3jyo_A 194 -AADGVVNATPM 204 (283)
T ss_dssp -HSSEEEECSST
T ss_pred -cCCEEEECCCC
Confidence 57999999864
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=98.22 E-value=1.6e-06 Score=75.86 Aligned_cols=79 Identities=16% Similarity=0.102 Sum_probs=57.7
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|++++||||++|||.++++.+...|++|++++++.++++...+ .+.+. .+|.++.+..+.+.+... ..++
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~----~g~~~---~~~~~~~~~~~~~~~~~~--~~~~ 210 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK----AGAWQ---VINYREEDLVERLKEITG--GKKV 210 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH----HTCSE---EEETTTSCHHHHHHHHTT--TCCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCCCE---EEECCCccHHHHHHHHhC--CCCc
Confidence 58999999999999999999999999999999998766554433 23332 246666544444433221 1379
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|++|+|+|
T Consensus 211 D~vi~~~g 218 (327)
T 1qor_A 211 RVVYDSVG 218 (327)
T ss_dssp EEEEECSC
T ss_pred eEEEECCc
Confidence 99999998
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=98.21 E-value=2.1e-06 Score=75.38 Aligned_cols=80 Identities=18% Similarity=0.152 Sum_probs=58.1
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|++++|+||+||||.++++.+...|++|++++++.++++...+ .+.+. .+|.++.+..+.+.+.. . ..++
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~----~g~~~---~~d~~~~~~~~~i~~~~-~-~~~~ 215 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK----LGCHH---TINYSTQDFAEVVREIT-G-GKGV 215 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HTCSE---EEETTTSCHHHHHHHHH-T-TCCE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCCE---EEECCCHHHHHHHHHHh-C-CCCC
Confidence 58999999999999999999999999999999999766554432 24332 24666654444443322 1 1379
Q ss_pred cEEEECCCC
Q 022386 91 DILVNAAAG 99 (298)
Q Consensus 91 d~li~~ag~ 99 (298)
|++|+|+|.
T Consensus 216 d~vi~~~g~ 224 (333)
T 1wly_A 216 DVVYDSIGK 224 (333)
T ss_dssp EEEEECSCT
T ss_pred eEEEECCcH
Confidence 999999983
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=98.18 E-value=1.4e-06 Score=76.79 Aligned_cols=80 Identities=10% Similarity=0.172 Sum_probs=58.7
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|++++|+|++|++|.++++.+...|++|++++++.++++.+.+ +.+... .+|.++.+++.+.+.++.. +++
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~---~~g~~~---~~d~~~~~~~~~~~~~~~~--~~~ 226 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKT---KFGFDD---AFNYKEESDLTAALKRCFP--NGI 226 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---TSCCSE---EEETTSCSCSHHHHHHHCT--TCE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HcCCce---EEecCCHHHHHHHHHHHhC--CCC
Confidence 58999999999999999999999999999999998765544332 234432 2366654444444444432 579
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|++|+|+|
T Consensus 227 d~vi~~~g 234 (345)
T 2j3h_A 227 DIYFENVG 234 (345)
T ss_dssp EEEEESSC
T ss_pred cEEEECCC
Confidence 99999997
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=98.17 E-value=9.5e-06 Score=71.10 Aligned_cols=157 Identities=8% Similarity=0.107 Sum_probs=100.0
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCC-------cEEEEcCC----hhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHH
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGA-------AIAIMGRR----KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVV 80 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~-------~Vv~~~r~----~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~ 80 (298)
.+.++||||+|.+|.+++..|+.+|. .|++++++ .++++....++.+....+. .|+....+....
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~---~~i~~~~~~~~a- 80 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLL---AGMTAHADPMTA- 80 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTE---EEEEEESSHHHH-
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhccccc---CcEEEecCcHHH-
Confidence 45899999999999999999999886 79999998 5556555566665321221 233322223332
Q ss_pred HHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc-
Q 022386 81 ESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH- 159 (298)
Q Consensus 81 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~- 159 (298)
+...|++|+.||.... ...+.. +.+..|+.....+++.+..+-. . .+++|++|....
T Consensus 81 ------l~~aD~Vi~~ag~~~~---~g~~r~---dl~~~N~~i~~~i~~~i~~~~~--p--------~a~ii~~SNPv~~ 138 (329)
T 1b8p_A 81 ------FKDADVALLVGARPRG---PGMERK---DLLEANAQIFTVQGKAIDAVAS--R--------NIKVLVVGNPANT 138 (329)
T ss_dssp ------TTTCSEEEECCCCCCC---TTCCHH---HHHHHHHHHHHHHHHHHHHHSC--T--------TCEEEECSSSHHH
T ss_pred ------hCCCCEEEEeCCCCCC---CCCCHH---HHHHHHHHHHHHHHHHHHHhcC--C--------CeEEEEccCchHH
Confidence 3478999999996432 122333 4577888888777777765530 1 467999988652
Q ss_pred -------cc-CCCCchhhHHHHHHHHHHHHHHHHHhc-CCCCeE
Q 022386 160 -------YT-ATWYQIHVSAAKAAVDSITRSLALEWG-TDYAIR 194 (298)
Q Consensus 160 -------~~-~~~~~~~Y~~sK~a~~~l~~~la~e~~-~~~gir 194 (298)
.. +.|....|+.++.-...+...++..++ .+..|+
T Consensus 139 ~t~~~~~~~~~~p~~~v~g~t~Ld~~r~~~~la~~lgv~~~~v~ 182 (329)
T 1b8p_A 139 NAYIAMKSAPSLPAKNFTAMLRLDHNRALSQIAAKTGKPVSSIE 182 (329)
T ss_dssp HHHHHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEE
T ss_pred HHHHHHHHcCCCCHHHEEEeecHHHHHHHHHHHHHhCcCHHHce
Confidence 12 333333477766555667777777765 233454
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=98.13 E-value=6.5e-06 Score=72.81 Aligned_cols=79 Identities=15% Similarity=0.162 Sum_probs=56.9
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|++++|+|++||+|.++++.+...|++|++++++.++++. +.+.+.+. .+|.++.+..+.+.+.. . ..++
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~----~~~~ga~~---~~d~~~~~~~~~~~~~~-~-~~~~ 240 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKI----VLQNGAHE---VFNHREVNYIDKIKKYV-G-EKGI 240 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH----HHHTTCSE---EEETTSTTHHHHHHHHH-C-TTCE
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHH----HHHcCCCE---EEeCCCchHHHHHHHHc-C-CCCc
Confidence 58999999999999999999999999999999998766552 23334432 24666654333332221 1 1379
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|++|+|+|
T Consensus 241 D~vi~~~G 248 (351)
T 1yb5_A 241 DIIIEMLA 248 (351)
T ss_dssp EEEEESCH
T ss_pred EEEEECCC
Confidence 99999998
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=98.12 E-value=3.1e-06 Score=75.02 Aligned_cols=79 Identities=13% Similarity=0.147 Sum_probs=56.4
Q ss_pred CC--cEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 11 KG--KVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 11 ~g--k~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
.| ++++|+|++||||.++++.+...|+ +|++++++.++++.+.++ .+.+. .+|.++.+ +.+.+.+...
T Consensus 158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~---~g~~~---~~d~~~~~-~~~~~~~~~~-- 228 (357)
T 2zb4_A 158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSE---LGFDA---AINYKKDN-VAEQLRESCP-- 228 (357)
T ss_dssp TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT---SCCSE---EEETTTSC-HHHHHHHHCT--
T ss_pred CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH---cCCce---EEecCchH-HHHHHHHhcC--
Confidence 36 9999999999999999999999999 999999987655544332 34332 34666643 3222332222
Q ss_pred CCccEEEECCC
Q 022386 88 GKLDILVNAAA 98 (298)
Q Consensus 88 ~~id~li~~ag 98 (298)
+++|++|+|+|
T Consensus 229 ~~~d~vi~~~G 239 (357)
T 2zb4_A 229 AGVDVYFDNVG 239 (357)
T ss_dssp TCEEEEEESCC
T ss_pred CCCCEEEECCC
Confidence 27999999998
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=98.12 E-value=2.1e-05 Score=66.96 Aligned_cols=76 Identities=14% Similarity=0.201 Sum_probs=58.3
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.+...+ .+.. +|+. ++. + +
T Consensus 116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~-~~~~--~~~~---~~~-------~--~ 179 (272)
T 1p77_A 116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG-NIQA--VSMD---SIP-------L--Q 179 (272)
T ss_dssp CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS-CEEE--EEGG---GCC-------C--S
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccC-CeEE--eeHH---Hhc-------c--C
Confidence 678999999998 799999999999999999999999988888887775432 3322 2321 110 1 4
Q ss_pred CccEEEECCCCC
Q 022386 89 KLDILVNAAAGN 100 (298)
Q Consensus 89 ~id~li~~ag~~ 100 (298)
..|++||+++..
T Consensus 180 ~~DivIn~t~~~ 191 (272)
T 1p77_A 180 TYDLVINATSAG 191 (272)
T ss_dssp CCSEEEECCCC-
T ss_pred CCCEEEECCCCC
Confidence 899999999854
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=4.4e-06 Score=73.35 Aligned_cols=79 Identities=14% Similarity=0.215 Sum_probs=57.0
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|++++|+|++||||.++++.+...|++|++++++.++.+.+.+ +.+.+. ..|.++.+-.+.+.+ .. .+++
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~---~~g~~~---~~~~~~~~~~~~~~~-~~--~~~~ 219 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVE---ELGFDG---AIDYKNEDLAAGLKR-EC--PKGI 219 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---TTCCSE---EEETTTSCHHHHHHH-HC--TTCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HcCCCE---EEECCCHHHHHHHHH-hc--CCCc
Confidence 58999999999999999999999999999999998766554423 334432 236665443333322 22 2479
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|++|+|+|
T Consensus 220 d~vi~~~g 227 (336)
T 4b7c_A 220 DVFFDNVG 227 (336)
T ss_dssp EEEEESSC
T ss_pred eEEEECCC
Confidence 99999998
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=2.2e-05 Score=67.98 Aligned_cols=83 Identities=18% Similarity=0.214 Sum_probs=61.4
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCC---hhHHHHHHHHHHhC-CCCeEEEEccCCCHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR---KTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVES 82 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~---~~~~~~~~~~~~~~-~~~~~~~~~Dls~~~~~~~~~~~ 82 (298)
.++++|+++|+|+ ||.|++++..|++.|+ +|+++.|+ .++.+++++++... +..+. ..++.+.+.....+
T Consensus 144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~--~~~~~~l~~~~~~l-- 218 (312)
T 3t4e_A 144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVT--VTDLADQHAFTEAL-- 218 (312)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEE--EEETTCHHHHHHHH--
T ss_pred CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceE--EechHhhhhhHhhc--
Confidence 4688999999997 8999999999999999 79999999 77788888777653 32233 34555543322222
Q ss_pred HHHHhCCccEEEECCCCC
Q 022386 83 TINHFGKLDILVNAAAGN 100 (298)
Q Consensus 83 ~~~~~~~id~li~~ag~~ 100 (298)
...|++||+....
T Consensus 219 -----~~~DiIINaTp~G 231 (312)
T 3t4e_A 219 -----ASADILTNGTKVG 231 (312)
T ss_dssp -----HHCSEEEECSSTT
T ss_pred -----cCceEEEECCcCC
Confidence 2589999988643
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=4.2e-06 Score=74.10 Aligned_cols=79 Identities=19% Similarity=0.235 Sum_probs=57.1
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|++++|+||+||||.++++.+...|++|++++++.++++.. +.+ +.+. .+|.++.+..+.+.+.. . ..++
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~---g~~~---~~~~~~~~~~~~~~~~~-~-~~~~ 232 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL---GAAA---GFNYKKEDFSEATLKFT-K-GAGV 232 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH---TCSE---EEETTTSCHHHHHHHHT-T-TSCE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCcE---EEecCChHHHHHHHHHh-c-CCCc
Confidence 589999999999999999999999999999999987765544 323 4332 24666544333333221 1 1379
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|++|+|+|
T Consensus 233 d~vi~~~G 240 (354)
T 2j8z_A 233 NLILDCIG 240 (354)
T ss_dssp EEEEESSC
T ss_pred eEEEECCC
Confidence 99999998
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=98.09 E-value=2.4e-05 Score=71.45 Aligned_cols=85 Identities=14% Similarity=0.186 Sum_probs=60.6
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEE--ccCC---------CHHHHHH
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLE--GDVR---------KREDAVR 78 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~--~Dls---------~~~~~~~ 78 (298)
-.|++++|+|++|+||.+++..+...|++|++++++.++++.+ .+.+.+..+-. .|+. +.++++.
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~----~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 294 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV----RALGCDLVINRAELGITDDIADDPRRVVETGRK 294 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HhcCCCEEEecccccccccccccccccchhhhH
Confidence 3589999999999999999999999999999998877655433 34454433221 2321 2344555
Q ss_pred HHHHHHHHhC-CccEEEECCC
Q 022386 79 VVESTINHFG-KLDILVNAAA 98 (298)
Q Consensus 79 ~~~~~~~~~~-~id~li~~ag 98 (298)
+.+.+.+..+ .+|++|+++|
T Consensus 295 ~~~~v~~~~g~g~Dvvid~~G 315 (447)
T 4a0s_A 295 LAKLVVEKAGREPDIVFEHTG 315 (447)
T ss_dssp HHHHHHHHHSSCCSEEEECSC
T ss_pred HHHHHHHHhCCCceEEEECCC
Confidence 6666666554 7999999998
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=1.4e-05 Score=70.95 Aligned_cols=76 Identities=17% Similarity=0.285 Sum_probs=54.1
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh---hHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK---TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~---~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
.++|++++|+|+ |++|..+++.+...|++|++++++. ++.+. .+. .+. +.+ | .+ ++.+.+.+ .
T Consensus 178 ~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~~~---~ga--~~v--~-~~--~~~~~~~~-~- 243 (366)
T 2cdc_A 178 TLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTV-IEE---TKT--NYY--N-SS--NGYDKLKD-S- 243 (366)
T ss_dssp SSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHH-HHH---HTC--EEE--E-CT--TCSHHHHH-H-
T ss_pred cCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHH-HHH---hCC--cee--c-hH--HHHHHHHH-h-
Confidence 456999999999 9999999999999999999999987 55432 222 243 223 5 54 22222232 2
Q ss_pred HhCCccEEEECCCC
Q 022386 86 HFGKLDILVNAAAG 99 (298)
Q Consensus 86 ~~~~id~li~~ag~ 99 (298)
. +++|++|+++|.
T Consensus 244 ~-~~~d~vid~~g~ 256 (366)
T 2cdc_A 244 V-GKFDVIIDATGA 256 (366)
T ss_dssp H-CCEEEEEECCCC
T ss_pred C-CCCCEEEECCCC
Confidence 2 689999999984
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=1.2e-05 Score=71.03 Aligned_cols=80 Identities=16% Similarity=0.237 Sum_probs=56.3
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHc-CCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
.|++++|+|+++++|..+++.+... |++|++++++.++++.. +. .+.+.. +|.++.+..+.+ .++... ++
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~-~~---~g~~~~---~~~~~~~~~~~~-~~~~~~-~~ 240 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA-KR---AGADYV---INASMQDPLAEI-RRITES-KG 240 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH-HH---HTCSEE---EETTTSCHHHHH-HHHTTT-SC
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HH---hCCCEE---ecCCCccHHHHH-HHHhcC-CC
Confidence 5899999999999999999999999 99999999987665544 22 243322 355554333222 222211 58
Q ss_pred ccEEEECCCC
Q 022386 90 LDILVNAAAG 99 (298)
Q Consensus 90 id~li~~ag~ 99 (298)
+|++|+++|.
T Consensus 241 ~d~vi~~~g~ 250 (347)
T 1jvb_A 241 VDAVIDLNNS 250 (347)
T ss_dssp EEEEEESCCC
T ss_pred ceEEEECCCC
Confidence 9999999983
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.98 E-value=1.6e-05 Score=70.24 Aligned_cols=78 Identities=21% Similarity=0.232 Sum_probs=57.1
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|++++|+||+|++|.+++..+...|++|++++++.++++...+ .+.+.. +|.++.+-.+.+. +.. .+++
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~~---~~~~~~~~~~~~~-~~~--~~g~ 236 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER----LGAKRG---INYRSEDFAAVIK-AET--GQGV 236 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HTCSEE---EETTTSCHHHHHH-HHH--SSCE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCCEE---EeCCchHHHHHHH-HHh--CCCc
Confidence 58999999999999999999999999999999998876654432 343322 3555543333333 232 3589
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|++|+++|
T Consensus 237 Dvvid~~g 244 (353)
T 4dup_A 237 DIILDMIG 244 (353)
T ss_dssp EEEEESCC
T ss_pred eEEEECCC
Confidence 99999998
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=97.94 E-value=0.00018 Score=62.76 Aligned_cols=121 Identities=13% Similarity=0.208 Sum_probs=76.2
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcC--CcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
.++++||||+|.+|..++..|+++| ..|++++++.+ +....++.+....... .. +++..+....+ ..
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v-~~-~~~t~d~~~al-------~g 76 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVV-RG-FLGQQQLEAAL-------TG 76 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEE-EE-EESHHHHHHHH-------TT
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceE-EE-EeCCCCHHHHc-------CC
Confidence 3589999999999999999999998 68999998765 3333445443222111 11 22333444433 47
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc
Q 022386 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 160 (298)
Q Consensus 90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~ 160 (298)
.|++|+.+|..... ..+.. ..+..|+.....+.+.+..+-. .+.++++|.....
T Consensus 77 aDvVi~~ag~~~~~---g~~r~---dl~~~N~~~~~~i~~~i~~~~p-----------~~~viv~SNPv~~ 130 (326)
T 1smk_A 77 MDLIIVPAGVPRKP---GMTRD---DLFKINAGIVKTLCEGIAKCCP-----------RAIVNLISNPVNS 130 (326)
T ss_dssp CSEEEECCCCCCCS---SCCCS---HHHHHHHHHHHHHHHHHHHHCT-----------TSEEEECCSSHHH
T ss_pred CCEEEEcCCcCCCC---CCCHH---HHHHHHHHHHHHHHHHHHhhCC-----------CeEEEEECCchHH
Confidence 99999999964321 11222 3477888888888877776432 3556665554443
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.92 E-value=9.8e-05 Score=56.91 Aligned_cols=78 Identities=14% Similarity=0.208 Sum_probs=58.7
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh-hHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
..+.++|+|+ |.+|+.+++.|.+.|++|++++++. +..+...+.. ...+.++..|.++++.++++ ....
T Consensus 2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~---~~~~~~i~gd~~~~~~l~~a------~i~~ 71 (153)
T 1id1_A 2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL---GDNADVIPGDSNDSSVLKKA------GIDR 71 (153)
T ss_dssp CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH---CTTCEEEESCTTSHHHHHHH------TTTT
T ss_pred CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh---cCCCeEEEcCCCCHHHHHHc------Chhh
Confidence 4567888886 9999999999999999999999974 4444443332 22377889999998876654 1247
Q ss_pred ccEEEECCC
Q 022386 90 LDILVNAAA 98 (298)
Q Consensus 90 id~li~~ag 98 (298)
.|.+|.+.+
T Consensus 72 ad~vi~~~~ 80 (153)
T 1id1_A 72 CRAILALSD 80 (153)
T ss_dssp CSEEEECSS
T ss_pred CCEEEEecC
Confidence 899998886
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=97.86 E-value=2.8e-05 Score=67.11 Aligned_cols=77 Identities=19% Similarity=0.198 Sum_probs=56.7
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+.+..... ..+ +.++ +.+..
T Consensus 138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~--~~~-----~~~~-------~~~~~ 202 (297)
T 2egg_A 138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS--AYF-----SLAE-------AETRL 202 (297)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC--CEE-----CHHH-------HHHTG
T ss_pred CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC--cee-----eHHH-------HHhhh
Confidence 578999999998 7999999999999998 899999998877777665532111 111 1222 22234
Q ss_pred CCccEEEECCCCC
Q 022386 88 GKLDILVNAAAGN 100 (298)
Q Consensus 88 ~~id~li~~ag~~ 100 (298)
...|++||+++..
T Consensus 203 ~~aDivIn~t~~~ 215 (297)
T 2egg_A 203 AEYDIIINTTSVG 215 (297)
T ss_dssp GGCSEEEECSCTT
T ss_pred ccCCEEEECCCCC
Confidence 5799999999854
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.85 E-value=2.8e-05 Score=68.40 Aligned_cols=79 Identities=20% Similarity=0.197 Sum_probs=56.7
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|++++|+|+++++|..+++.+...|++|++++++.++++... . .+.+. .+|.++.+ +.+.+.++.. ..++
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~---~ga~~---~~d~~~~~-~~~~~~~~~~-~~~~ 236 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-A---LGADE---TVNYTHPD-WPKEVRRLTG-GKGA 236 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-H---HTCSE---EEETTSTT-HHHHHHHHTT-TTCE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-h---cCCCE---EEcCCccc-HHHHHHHHhC-CCCc
Confidence 5899999999999999999999999999999999877665443 2 24332 24766643 2222222221 1379
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|++|+++|
T Consensus 237 d~vi~~~g 244 (343)
T 2eih_A 237 DKVVDHTG 244 (343)
T ss_dssp EEEEESSC
T ss_pred eEEEECCC
Confidence 99999998
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=97.85 E-value=8.3e-05 Score=63.47 Aligned_cols=75 Identities=17% Similarity=0.250 Sum_probs=58.7
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.++++|+++|+|+ ||+|++++..|++.|+ +|+++.|+.++.+++.+.+...+ .+.....+ + +.
T Consensus 122 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~-~~~~~~~~--~---l~--------- 185 (281)
T 3o8q_A 122 VLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG-EVKAQAFE--Q---LK--------- 185 (281)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS-CEEEEEGG--G---CC---------
T ss_pred CCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC-CeeEeeHH--H---hc---------
Confidence 3678999999998 7999999999999997 89999999998888888886543 34444321 1 10
Q ss_pred hCCccEEEECCCC
Q 022386 87 FGKLDILVNAAAG 99 (298)
Q Consensus 87 ~~~id~li~~ag~ 99 (298)
...|++||+...
T Consensus 186 -~~aDiIInaTp~ 197 (281)
T 3o8q_A 186 -QSYDVIINSTSA 197 (281)
T ss_dssp -SCEEEEEECSCC
T ss_pred -CCCCEEEEcCcC
Confidence 378999999864
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=97.84 E-value=2.4e-05 Score=68.35 Aligned_cols=80 Identities=20% Similarity=0.157 Sum_probs=56.1
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|++++|+||+|++|.+++..+...|++|++++++.++++... +.+.+.. .|.++.+-.+.+.+.. ....+
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~----~~Ga~~~---~~~~~~~~~~~~~~~~--~~~g~ 210 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK----ALGAWET---IDYSHEDVAKRVLELT--DGKKC 210 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----HHTCSEE---EETTTSCHHHHHHHHT--TTCCE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HcCCCEE---EeCCCccHHHHHHHHh--CCCCc
Confidence 4899999999999999999999999999999999877655433 2343322 3555543333332211 11379
Q ss_pred cEEEECCCC
Q 022386 91 DILVNAAAG 99 (298)
Q Consensus 91 d~li~~ag~ 99 (298)
|++|+++|.
T Consensus 211 Dvvid~~g~ 219 (325)
T 3jyn_A 211 PVVYDGVGQ 219 (325)
T ss_dssp EEEEESSCG
T ss_pred eEEEECCCh
Confidence 999999983
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.82 E-value=0.0001 Score=55.45 Aligned_cols=75 Identities=19% Similarity=0.376 Sum_probs=55.6
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
++.++|+|+ |.+|..+++.|.+.|++|++++++.+..+...+. . .+.++..|.++.+.+.+. .....|
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~---~--~~~~~~~d~~~~~~l~~~------~~~~~d 71 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE---I--DALVINGDCTKIKTLEDA------GIEDAD 71 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---C--SSEEEESCTTSHHHHHHT------TTTTCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh---c--CcEEEEcCCCCHHHHHHc------CcccCC
Confidence 457899987 9999999999999999999999987655443321 1 245677899887665331 134789
Q ss_pred EEEECCC
Q 022386 92 ILVNAAA 98 (298)
Q Consensus 92 ~li~~ag 98 (298)
++|.+.+
T Consensus 72 ~vi~~~~ 78 (140)
T 1lss_A 72 MYIAVTG 78 (140)
T ss_dssp EEEECCS
T ss_pred EEEEeeC
Confidence 9999975
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=97.80 E-value=2.4e-05 Score=68.53 Aligned_cols=80 Identities=20% Similarity=0.254 Sum_probs=56.0
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|++++|+||+|++|.+++..+...|++|++++++.++++.. .+.+.+.. .|.++.+-.+.+.+ ... ..++
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~----~~~ga~~~---~~~~~~~~~~~~~~-~~~-~~g~ 218 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA----KEYGAEYL---INASKEDILRQVLK-FTN-GKGV 218 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHTTCSEE---EETTTSCHHHHHHH-HTT-TSCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHcCCcEE---EeCCCchHHHHHHH-HhC-CCCc
Confidence 589999999999999999999999999999999987665532 33444322 35554333333222 211 1379
Q ss_pred cEEEECCCC
Q 022386 91 DILVNAAAG 99 (298)
Q Consensus 91 d~li~~ag~ 99 (298)
|++|+++|.
T Consensus 219 D~vid~~g~ 227 (334)
T 3qwb_A 219 DASFDSVGK 227 (334)
T ss_dssp EEEEECCGG
T ss_pred eEEEECCCh
Confidence 999999983
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.79 E-value=7.8e-05 Score=63.35 Aligned_cols=75 Identities=20% Similarity=0.183 Sum_probs=57.8
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.++++|+++|+|+ ||+|++++..|++.|+ +|+++.|+.++.+++++.+.. ..+.... +.+ +. .
T Consensus 116 ~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~--~~~~~~~--~~~---l~-------~- 179 (272)
T 3pwz_A 116 EPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH--SRLRISR--YEA---LE-------G- 179 (272)
T ss_dssp CCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC--TTEEEEC--SGG---GT-------T-
T ss_pred CCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc--CCeeEee--HHH---hc-------c-
Confidence 3688999999998 6999999999999997 899999999888888887754 2344432 221 11 0
Q ss_pred hCCccEEEECCCC
Q 022386 87 FGKLDILVNAAAG 99 (298)
Q Consensus 87 ~~~id~li~~ag~ 99 (298)
...|++||+...
T Consensus 180 -~~~DivInaTp~ 191 (272)
T 3pwz_A 180 -QSFDIVVNATSA 191 (272)
T ss_dssp -CCCSEEEECSSG
T ss_pred -cCCCEEEECCCC
Confidence 478999999864
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=97.78 E-value=2.9e-05 Score=68.22 Aligned_cols=79 Identities=18% Similarity=0.132 Sum_probs=55.7
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|++++|+|+++++|..++..+...|++|++++++.++++.+.+ .+.+.. .|.++.+-.+.+.+ ... ..++
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----lga~~~---~~~~~~~~~~~~~~-~~~-~~g~ 214 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR----LGAAYV---IDTSTAPLYETVME-LTN-GIGA 214 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH----HTCSEE---EETTTSCHHHHHHH-HTT-TSCE
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----CCCcEE---EeCCcccHHHHHHH-HhC-CCCC
Confidence 58999999999999999999998999999999998776654433 344322 35554432332222 211 1379
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|++|+++|
T Consensus 215 Dvvid~~g 222 (340)
T 3gms_A 215 DAAIDSIG 222 (340)
T ss_dssp EEEEESSC
T ss_pred cEEEECCC
Confidence 99999998
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=97.77 E-value=0.00028 Score=61.24 Aligned_cols=155 Identities=10% Similarity=0.054 Sum_probs=91.1
Q ss_pred EEEEecCCchhHHHHHHHHHHcCC--cEEEEcC--ChhHHHHHHHHHHhC----CCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGR--RKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r--~~~~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
.++||||+|++|..++..|+.+|. .++++++ +.++++....++.+. +.++.....| +++ .+
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l-------~~ 70 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DEN-------LR 70 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTC-------GG
T ss_pred EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cch-------HH
Confidence 689999999999999999998885 5888888 655454444444331 1222322211 011 12
Q ss_pred HhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc-----
Q 022386 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY----- 160 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~----- 160 (298)
.+...|++||.||.... + ..+. ...++.|+.....+++++..+- + +.++++|.....
T Consensus 71 al~gaD~Vi~~Ag~~~~-~--g~~r---~dl~~~N~~i~~~i~~~i~~~~-~-----------~~vlv~SNPv~~~t~~~ 132 (313)
T 1hye_A 71 IIDESDVVIITSGVPRK-E--GMSR---MDLAKTNAKIVGKYAKKIAEIC-D-----------TKIFVITNPVDVMTYKA 132 (313)
T ss_dssp GGTTCSEEEECCSCCCC-T--TCCH---HHHHHHHHHHHHHHHHHHHHHC-C-----------CEEEECSSSHHHHHHHH
T ss_pred HhCCCCEEEECCCCCCC-C--CCcH---HHHHHHHHHHHHHHHHHHHHhC-C-----------eEEEEecCcHHHHHHHH
Confidence 23589999999996421 1 2233 3458899998888888887654 2 446666655532
Q ss_pred ---cCCCCchhhHH-HHHHHHHHHHHHHHHhc-CCCCeEEEE
Q 022386 161 ---TATWYQIHVSA-AKAAVDSITRSLALEWG-TDYAIRVNG 197 (298)
Q Consensus 161 ---~~~~~~~~Y~~-sK~a~~~l~~~la~e~~-~~~girv~~ 197 (298)
.+.|..-.++. +..-...+...++..++ .+..|+...
T Consensus 133 ~k~~~~p~~rviG~gt~LD~~r~~~~la~~lgv~~~~v~~~v 174 (313)
T 1hye_A 133 LVDSKFERNQVFGLGTHLDSLRFKVAIAKFFGVHIDEVRTRI 174 (313)
T ss_dssp HHHHCCCTTSEEECTTHHHHHHHHHHHHHHHTCCGGGEECCE
T ss_pred HHhhCcChhcEEEeCccHHHHHHHHHHHHHhCcCHHHeEEEE
Confidence 12233333444 33334555566666654 123455433
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=97.77 E-value=0.00012 Score=64.93 Aligned_cols=78 Identities=18% Similarity=0.115 Sum_probs=57.6
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
.+++++++|+|+ |++|++++..+...|++|++++|+.++++.+.+.... .+.. +..+.+++.+.+ .
T Consensus 164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~---~~~~---~~~~~~~~~~~~-------~ 229 (361)
T 1pjc_A 164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS---RVEL---LYSNSAEIETAV-------A 229 (361)
T ss_dssp TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---GSEE---EECCHHHHHHHH-------H
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc---eeEe---eeCCHHHHHHHH-------c
Confidence 477899999999 9999999999999999999999998877766554432 1212 223444443332 2
Q ss_pred CccEEEECCCCC
Q 022386 89 KLDILVNAAAGN 100 (298)
Q Consensus 89 ~id~li~~ag~~ 100 (298)
..|++|++++..
T Consensus 230 ~~DvVI~~~~~~ 241 (361)
T 1pjc_A 230 EADLLIGAVLVP 241 (361)
T ss_dssp TCSEEEECCCCT
T ss_pred CCCEEEECCCcC
Confidence 799999999853
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=97.72 E-value=6.8e-05 Score=65.92 Aligned_cols=79 Identities=20% Similarity=0.285 Sum_probs=54.4
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|++++|+|++|++|..++..+...|++|++++++.++.+...+ .+.+. .+ |.. +++.+.+.+... ..++
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga~~-v~--~~~--~~~~~~v~~~~~-~~g~ 228 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS----VGADI-VL--PLE--EGWAKAVREATG-GAGV 228 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----HTCSE-EE--ESS--TTHHHHHHHHTT-TSCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCcE-Ee--cCc--hhHHHHHHHHhC-CCCc
Confidence 58999999999999999999999999999999998876654332 24332 22 333 223322222221 1269
Q ss_pred cEEEECCCC
Q 022386 91 DILVNAAAG 99 (298)
Q Consensus 91 d~li~~ag~ 99 (298)
|++|+++|.
T Consensus 229 Dvvid~~g~ 237 (342)
T 4eye_A 229 DMVVDPIGG 237 (342)
T ss_dssp EEEEESCC-
T ss_pred eEEEECCch
Confidence 999999983
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00014 Score=64.11 Aligned_cols=78 Identities=14% Similarity=0.149 Sum_probs=54.9
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
+++++|+||+|++|..++..+...|++|++++++.++++.+. +.+.+.. .|..+.+-.+.+ .++... .++|
T Consensus 165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~~Ga~~~---~~~~~~~~~~~v-~~~~~~-~g~D 235 (349)
T 3pi7_A 165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK----DIGAAHV---LNEKAPDFEATL-REVMKA-EQPR 235 (349)
T ss_dssp CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH----HHTCSEE---EETTSTTHHHHH-HHHHHH-HCCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HcCCCEE---EECCcHHHHHHH-HHHhcC-CCCc
Confidence 389999999999999999999999999999999887665443 2343322 355543333333 222221 3799
Q ss_pred EEEECCC
Q 022386 92 ILVNAAA 98 (298)
Q Consensus 92 ~li~~ag 98 (298)
++|+++|
T Consensus 236 ~vid~~g 242 (349)
T 3pi7_A 236 IFLDAVT 242 (349)
T ss_dssp EEEESSC
T ss_pred EEEECCC
Confidence 9999998
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00019 Score=65.58 Aligned_cols=85 Identities=16% Similarity=0.150 Sum_probs=62.2
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEE--cc--------CCCHHHHHHH
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLE--GD--------VRKREDAVRV 79 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~--~D--------ls~~~~~~~~ 79 (298)
-.|++++|+|++|++|...+..+...|++|++++++.++++.+ ++.|.+..+-. .| .++.++++++
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~----~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~ 302 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC----RAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRF 302 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHHTCCEEEETTTTTCCSEEETTEECHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH----HhhCCcEEEecCcCcccccccccccchHHHHHH
Confidence 3589999999999999999999999999999998876655543 23344322211 12 2456677777
Q ss_pred HHHHHHHhC--CccEEEECCC
Q 022386 80 VESTINHFG--KLDILVNAAA 98 (298)
Q Consensus 80 ~~~~~~~~~--~id~li~~ag 98 (298)
.+.+.+..+ .+|++|.++|
T Consensus 303 ~~~i~~~t~g~g~Dvvid~~G 323 (456)
T 3krt_A 303 GKRIRELTGGEDIDIVFEHPG 323 (456)
T ss_dssp HHHHHHHHTSCCEEEEEECSC
T ss_pred HHHHHHHhCCCCCcEEEEcCC
Confidence 777776553 8999999998
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00015 Score=64.57 Aligned_cols=77 Identities=13% Similarity=0.131 Sum_probs=57.9
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
.+.|++++|+|+ |++|+.+++.+...|++|++++++.++++...+.+ +..+. ++.++.+++.+++.
T Consensus 165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~---g~~~~---~~~~~~~~l~~~l~------- 230 (377)
T 2vhw_A 165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF---CGRIH---TRYSSAYELEGAVK------- 230 (377)
T ss_dssp TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TTSSE---EEECCHHHHHHHHH-------
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc---CCeeE---eccCCHHHHHHHHc-------
Confidence 588999999998 99999999999999999999999987665544332 33332 24445555554432
Q ss_pred CccEEEECCCC
Q 022386 89 KLDILVNAAAG 99 (298)
Q Consensus 89 ~id~li~~ag~ 99 (298)
..|++|++++.
T Consensus 231 ~aDvVi~~~~~ 241 (377)
T 2vhw_A 231 RADLVIGAVLV 241 (377)
T ss_dssp HCSEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 68999999874
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00012 Score=65.00 Aligned_cols=75 Identities=17% Similarity=0.240 Sum_probs=55.2
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|++++|+|+ |++|..++..+...|++|++++++.++.+...+ +.+.+. ..|..+.+.+++ ..+.+
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~---~lGa~~---v~~~~~~~~~~~-------~~~~~ 252 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALK---NFGADS---FLVSRDQEQMQA-------AAGTL 252 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHH---TSCCSE---EEETTCHHHHHH-------TTTCE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---hcCCce---EEeccCHHHHHH-------hhCCC
Confidence 6899999996 999999999999999999999998776554332 334432 236666543332 22589
Q ss_pred cEEEECCCC
Q 022386 91 DILVNAAAG 99 (298)
Q Consensus 91 d~li~~ag~ 99 (298)
|++|+++|.
T Consensus 253 D~vid~~g~ 261 (366)
T 1yqd_A 253 DGIIDTVSA 261 (366)
T ss_dssp EEEEECCSS
T ss_pred CEEEECCCc
Confidence 999999984
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00023 Score=63.15 Aligned_cols=75 Identities=20% Similarity=0.279 Sum_probs=56.0
Q ss_pred CCCCCc--EEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 8 DILKGK--VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 8 ~~l~gk--~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
.+++|| .|+|.|+ |++|+.+++.|.+ ..+|.+++++.+++++.. ..+..+.+|++|.+++.++++
T Consensus 10 ~~~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~-------~~~~~~~~d~~d~~~l~~~~~---- 76 (365)
T 3abi_A 10 HHIEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK-------EFATPLKVDASNFDKLVEVMK---- 76 (365)
T ss_dssp ------CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT-------TTSEEEECCTTCHHHHHHHHT----
T ss_pred ccccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh-------ccCCcEEEecCCHHHHHHHHh----
Confidence 345554 6899998 9999999999865 578999999977655432 235678899999998888765
Q ss_pred HhCCccEEEECCC
Q 022386 86 HFGKLDILVNAAA 98 (298)
Q Consensus 86 ~~~~id~li~~ag 98 (298)
+.|++|++++
T Consensus 77 ---~~DvVi~~~p 86 (365)
T 3abi_A 77 ---EFELVIGALP 86 (365)
T ss_dssp ---TCSEEEECCC
T ss_pred ---CCCEEEEecC
Confidence 6899999986
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00019 Score=62.89 Aligned_cols=76 Identities=18% Similarity=0.223 Sum_probs=55.1
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|++++|+|+ +++|..++..+...|++|++++++.++++.. .+.+.+. .+|.++.+ +.+.+.++. +.+
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~----~~lGa~~---~~d~~~~~-~~~~~~~~~---~~~ 231 (339)
T 1rjw_A 164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA----KELGADL---VVNPLKED-AAKFMKEKV---GGV 231 (339)
T ss_dssp TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH----HHTTCSE---EECTTTSC-HHHHHHHHH---SSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHCCCCE---EecCCCcc-HHHHHHHHh---CCC
Confidence 5889999999 8899999999999999999999987765543 2344432 24666543 322233222 689
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|++|+++|
T Consensus 232 d~vid~~g 239 (339)
T 1rjw_A 232 HAAVVTAV 239 (339)
T ss_dssp EEEEESSC
T ss_pred CEEEECCC
Confidence 99999998
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00029 Score=61.94 Aligned_cols=77 Identities=13% Similarity=0.219 Sum_probs=54.5
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|++++|+||+|++|..++..+...|++|++++++.++++.+.+ .+.+.. .|..+ ++.+.+.++ ..+.+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~v---i~~~~--~~~~~~~~~--~~~g~ 218 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK----MGADIV---LNHKE--SLLNQFKTQ--GIELV 218 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH----HTCSEE---ECTTS--CHHHHHHHH--TCCCE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCcEE---EECCc--cHHHHHHHh--CCCCc
Confidence 58999999999999999999999999999999998766554332 343322 24333 222323332 22479
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|++++++|
T Consensus 219 Dvv~d~~g 226 (346)
T 3fbg_A 219 DYVFCTFN 226 (346)
T ss_dssp EEEEESSC
T ss_pred cEEEECCC
Confidence 99999997
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00025 Score=62.85 Aligned_cols=78 Identities=15% Similarity=0.096 Sum_probs=54.9
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|++++|+||+|++|..++..+...|++|++++++.++++.. .+.+.+.. .|..+. ++.+.+.+.. .+++
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~----~~~Ga~~~---~~~~~~-~~~~~~~~~~--~~g~ 232 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFL----KSLGCDRP---INYKTE-PVGTVLKQEY--PEGV 232 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHTTCSEE---EETTTS-CHHHHHHHHC--TTCE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHH----HHcCCcEE---EecCCh-hHHHHHHHhc--CCCC
Confidence 588999999999999999999999999999999987655433 33454322 244433 2333333221 1479
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|++|+++|
T Consensus 233 D~vid~~g 240 (362)
T 2c0c_A 233 DVVYESVG 240 (362)
T ss_dssp EEEEECSC
T ss_pred CEEEECCC
Confidence 99999998
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=97.51 E-value=0.0016 Score=57.57 Aligned_cols=82 Identities=15% Similarity=0.161 Sum_probs=58.0
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCc-EEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
.|+++||+|+ |++|...+......|++ |++++++.++++... ++ ...+..+..|-.+.+++.+.+.++.. -..
T Consensus 179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l---~~~~~~~~~~~~~~~~~~~~v~~~t~-g~g 252 (363)
T 3m6i_A 179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAK-EI---CPEVVTHKVERLSAEESAKKIVESFG-GIE 252 (363)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH-HH---CTTCEEEECCSCCHHHHHHHHHHHTS-SCC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh---chhcccccccccchHHHHHHHHHHhC-CCC
Confidence 4889999998 99999999888889997 888988877655443 33 23344455565555555544443321 137
Q ss_pred ccEEEECCC
Q 022386 90 LDILVNAAA 98 (298)
Q Consensus 90 id~li~~ag 98 (298)
+|+++.++|
T Consensus 253 ~Dvvid~~g 261 (363)
T 3m6i_A 253 PAVALECTG 261 (363)
T ss_dssp CSEEEECSC
T ss_pred CCEEEECCC
Confidence 999999998
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00019 Score=56.96 Aligned_cols=78 Identities=18% Similarity=0.137 Sum_probs=58.1
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHc-CCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
++.++.++|.| .|.+|..+++.|.+. |++|++++++.+..+.. .+.+ +..+..|.++.+.++++ ...
T Consensus 36 ~~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~----~~~g--~~~~~gd~~~~~~l~~~-----~~~ 103 (183)
T 3c85_A 36 NPGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQH----RSEG--RNVISGDATDPDFWERI-----LDT 103 (183)
T ss_dssp CCTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHH----HHTT--CCEEECCTTCHHHHHTB-----CSC
T ss_pred CCCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHH----HHCC--CCEEEcCCCCHHHHHhc-----cCC
Confidence 46677889998 599999999999999 99999999997655443 3333 44567899988655432 012
Q ss_pred CCccEEEECCC
Q 022386 88 GKLDILVNAAA 98 (298)
Q Consensus 88 ~~id~li~~ag 98 (298)
...|++|.+.+
T Consensus 104 ~~ad~vi~~~~ 114 (183)
T 3c85_A 104 GHVKLVLLAMP 114 (183)
T ss_dssp CCCCEEEECCS
T ss_pred CCCCEEEEeCC
Confidence 47899998875
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=97.50 E-value=0.0003 Score=61.92 Aligned_cols=78 Identities=17% Similarity=0.168 Sum_probs=53.3
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
.|++++|+|+ |++|..+++.+...|+ +|++++++.++++... +.+.+. . .|..+++ +.+.+.++.. ...
T Consensus 167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~----~~Ga~~-~--~~~~~~~-~~~~v~~~~~-g~g 236 (348)
T 2d8a_A 167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK----KVGADY-V--INPFEED-VVKEVMDITD-GNG 236 (348)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH----HHTCSE-E--ECTTTSC-HHHHHHHHTT-TSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH----HhCCCE-E--ECCCCcC-HHHHHHHHcC-CCC
Confidence 7899999999 9999999999999999 8999999876554332 234322 1 3554432 2222222211 126
Q ss_pred ccEEEECCC
Q 022386 90 LDILVNAAA 98 (298)
Q Consensus 90 id~li~~ag 98 (298)
+|++|+++|
T Consensus 237 ~D~vid~~g 245 (348)
T 2d8a_A 237 VDVFLEFSG 245 (348)
T ss_dssp EEEEEECSC
T ss_pred CCEEEECCC
Confidence 999999998
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00051 Score=57.56 Aligned_cols=80 Identities=18% Similarity=0.301 Sum_probs=60.6
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCCh-------------------hHHHHHHHHHHhCCC--CeEEEE
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK-------------------TVLRSAVAALHSLGI--PAIGLE 67 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~-------------------~~~~~~~~~~~~~~~--~~~~~~ 67 (298)
|++++|+|.|+ ||+|.++++.|+..|. ++.+++++. .+.+.+.+.+.+..+ ++..+.
T Consensus 29 l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~ 107 (249)
T 1jw9_B 29 LKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN 107 (249)
T ss_dssp HHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEe
Confidence 56789999986 7999999999999998 799999987 677778788876544 355666
Q ss_pred ccCCCHHHHHHHHHHHHHHhCCccEEEECCC
Q 022386 68 GDVRKREDAVRVVESTINHFGKLDILVNAAA 98 (298)
Q Consensus 68 ~Dls~~~~~~~~~~~~~~~~~~id~li~~ag 98 (298)
.++++ +.+..++ ...|++|.+..
T Consensus 108 ~~~~~-~~~~~~~-------~~~DvVi~~~d 130 (249)
T 1jw9_B 108 ALLDD-AELAALI-------AEHDLVLDCTD 130 (249)
T ss_dssp SCCCH-HHHHHHH-------HTSSEEEECCS
T ss_pred ccCCH-hHHHHHH-------hCCCEEEEeCC
Confidence 66663 3344333 37899998874
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00019 Score=55.47 Aligned_cols=78 Identities=14% Similarity=0.213 Sum_probs=56.1
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
++.+++++|.|+ |.+|..+++.|.+.|++|++++++.+..+.... .. .+..+..|.++.+.+.+. ...
T Consensus 16 ~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~~--g~~~~~~d~~~~~~l~~~------~~~ 83 (155)
T 2g1u_A 16 KQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---EF--SGFTVVGDAAEFETLKEC------GME 83 (155)
T ss_dssp -CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---TC--CSEEEESCTTSHHHHHTT------TGG
T ss_pred ccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---cC--CCcEEEecCCCHHHHHHc------Ccc
Confidence 455789999986 999999999999999999999998765432210 22 245667888886544321 124
Q ss_pred CccEEEECCC
Q 022386 89 KLDILVNAAA 98 (298)
Q Consensus 89 ~id~li~~ag 98 (298)
..|++|.+.+
T Consensus 84 ~ad~Vi~~~~ 93 (155)
T 2g1u_A 84 KADMVFAFTN 93 (155)
T ss_dssp GCSEEEECSS
T ss_pred cCCEEEEEeC
Confidence 6899999886
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=97.49 E-value=0.0012 Score=56.92 Aligned_cols=101 Identities=7% Similarity=-0.048 Sum_probs=66.4
Q ss_pred EEEEecCCchhHHHHHHHHHHcCC--cEEEEcC--ChhHHHHHHHHHHhC---CCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGR--RKTVLRSAVAALHSL---GIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r--~~~~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
+++||||+|.+|..++..|+..|. .++++++ +.++++....++.+. ..++.... + +. +.
T Consensus 2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~-----------~a 67 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GY-----------ED 67 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CG-----------GG
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CH-----------HH
Confidence 689999999999999999998886 5888988 765555444555442 22333332 1 11 12
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHH
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 134 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 134 (298)
+...|++|+.||.... + ..+.. ..+..|+.....+.+.+..+
T Consensus 68 ~~~aDvVi~~ag~~~~-~--g~~r~---dl~~~N~~i~~~i~~~i~~~ 109 (303)
T 1o6z_A 68 TAGSDVVVITAGIPRQ-P--GQTRI---DLAGDNAPIMEDIQSSLDEH 109 (303)
T ss_dssp GTTCSEEEECCCCCCC-T--TCCHH---HHHHHHHHHHHHHHHHHHTT
T ss_pred hCCCCEEEEcCCCCCC-C--CCCHH---HHHHHHHHHHHHHHHHHHHH
Confidence 3479999999995321 1 22333 34778888777777666543
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00018 Score=61.92 Aligned_cols=73 Identities=15% Similarity=0.225 Sum_probs=52.6
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|++++|+|++|++|..++..+...|++|++++++.++.+.. .+.+.+.. .|..+.+++ .+.+ +++
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~----~~~ga~~~---~~~~~~~~~---~~~~----~~~ 190 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP----LALGAEEA---ATYAEVPER---AKAW----GGL 190 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH----HHTTCSEE---EEGGGHHHH---HHHT----TSE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HhcCCCEE---EECCcchhH---HHHh----cCc
Confidence 589999999999999999999999999999999987765543 23343322 355441222 2222 589
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|++|+ +|
T Consensus 191 d~vid-~g 197 (302)
T 1iz0_A 191 DLVLE-VR 197 (302)
T ss_dssp EEEEE-CS
T ss_pred eEEEE-CC
Confidence 99999 87
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=97.42 E-value=0.001 Score=50.37 Aligned_cols=77 Identities=16% Similarity=0.135 Sum_probs=58.3
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
..+++ .++|.|+ |.+|..+++.|.+.|++|++++++.+..+... +.+ +.++..|.++++.++++ ..
T Consensus 4 ~~~~~-~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~----~~g--~~~i~gd~~~~~~l~~a------~i 69 (140)
T 3fwz_A 4 VDICN-HALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELR----ERG--VRAVLGNAANEEIMQLA------HL 69 (140)
T ss_dssp CCCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH----HTT--CEEEESCTTSHHHHHHT------TG
T ss_pred ccCCC-CEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH----HcC--CCEEECCCCCHHHHHhc------Cc
Confidence 34544 6777776 88999999999999999999999987655433 323 56788999999876653 12
Q ss_pred CCccEEEECCC
Q 022386 88 GKLDILVNAAA 98 (298)
Q Consensus 88 ~~id~li~~ag 98 (298)
...|.+|.+.+
T Consensus 70 ~~ad~vi~~~~ 80 (140)
T 3fwz_A 70 ECAKWLILTIP 80 (140)
T ss_dssp GGCSEEEECCS
T ss_pred ccCCEEEEECC
Confidence 36888888875
|
| >1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1 | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00023 Score=61.38 Aligned_cols=38 Identities=18% Similarity=0.218 Sum_probs=32.1
Q ss_pred CCCCcE-EEEecC-C-----------------chhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 9 ILKGKV-ALLTGG-G-----------------SGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 9 ~l~gk~-~lVtG~-t-----------------~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
+++||. +|||+| | |-.|.++|++++++|+.|+++.+..
T Consensus 33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR 89 (313)
T ss_dssp HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence 478888 999954 4 4599999999999999999988753
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00028 Score=61.99 Aligned_cols=76 Identities=21% Similarity=0.249 Sum_probs=53.1
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
.|++++|+|+ |++|..++..+...|+ +|++++++.++.+...+ . .+ . ..|..++ ++.+.+.++. ..+
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~----l-a~-~--v~~~~~~-~~~~~~~~~~--~~g 231 (343)
T 2dq4_A 164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP----Y-AD-R--LVNPLEE-DLLEVVRRVT--GSG 231 (343)
T ss_dssp TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT----T-CS-E--EECTTTS-CHHHHHHHHH--SSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----h-HH-h--ccCcCcc-CHHHHHHHhc--CCC
Confidence 7899999999 9999999998888999 89999998765443221 1 11 1 2355542 2333333333 347
Q ss_pred ccEEEECCC
Q 022386 90 LDILVNAAA 98 (298)
Q Consensus 90 id~li~~ag 98 (298)
+|++|.++|
T Consensus 232 ~D~vid~~g 240 (343)
T 2dq4_A 232 VEVLLEFSG 240 (343)
T ss_dssp EEEEEECSC
T ss_pred CCEEEECCC
Confidence 999999998
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00035 Score=61.40 Aligned_cols=76 Identities=22% Similarity=0.320 Sum_probs=52.1
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|+++||+||+|++|..++..+...|++|+++ ++.++++. +++.+.+. +| .+.+ +...+.+... ...+
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~----~~~lGa~~----i~-~~~~-~~~~~~~~~~-~~g~ 217 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEY----VRDLGATP----ID-ASRE-PEDYAAEHTA-GQGF 217 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHH----HHHHTSEE----EE-TTSC-HHHHHHHHHT-TSCE
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHH----HHHcCCCE----ec-cCCC-HHHHHHHHhc-CCCc
Confidence 48999999999999999999999999999988 66655433 23334332 34 3322 3333333221 1379
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|++|+++|
T Consensus 218 D~vid~~g 225 (343)
T 3gaz_A 218 DLVYDTLG 225 (343)
T ss_dssp EEEEESSC
T ss_pred eEEEECCC
Confidence 99999998
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00011 Score=56.14 Aligned_cols=70 Identities=16% Similarity=0.223 Sum_probs=52.1
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
+++++|.|+ |++|+.+++.|.+.|++|++++|+.++.+++.+.+. +... +..+. ..+++ ..|
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~-----~~~~--~~~~~---~~~~~-------~~D 82 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE-----YEYV--LINDI---DSLIK-------NND 82 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT-----CEEE--ECSCH---HHHHH-------TCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC-----CceE--eecCH---HHHhc-------CCC
Confidence 889999996 999999999999999999999999887777666552 1221 23332 22222 689
Q ss_pred EEEECCCC
Q 022386 92 ILVNAAAG 99 (298)
Q Consensus 92 ~li~~ag~ 99 (298)
++|++.+.
T Consensus 83 ivi~at~~ 90 (144)
T 3oj0_A 83 VIITATSS 90 (144)
T ss_dssp EEEECSCC
T ss_pred EEEEeCCC
Confidence 99998874
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00073 Score=55.21 Aligned_cols=73 Identities=15% Similarity=0.237 Sum_probs=57.4
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l 93 (298)
.++|+|+ |.+|..+++.|.++|++|++++++.+..+++.+. . .+.++..|.++++.++++ .....|++
T Consensus 2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~---~--~~~~i~gd~~~~~~l~~a------~i~~ad~v 69 (218)
T 3l4b_C 2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK---L--KATIIHGDGSHKEILRDA------EVSKNDVV 69 (218)
T ss_dssp CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH---S--SSEEEESCTTSHHHHHHH------TCCTTCEE
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH---c--CCeEEEcCCCCHHHHHhc------CcccCCEE
Confidence 5889996 8999999999999999999999998766554332 1 356789999998877654 12478989
Q ss_pred EECCC
Q 022386 94 VNAAA 98 (298)
Q Consensus 94 i~~ag 98 (298)
|.+.+
T Consensus 70 i~~~~ 74 (218)
T 3l4b_C 70 VILTP 74 (218)
T ss_dssp EECCS
T ss_pred EEecC
Confidence 88775
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00076 Score=59.35 Aligned_cols=79 Identities=20% Similarity=0.253 Sum_probs=52.4
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCC-HHHHHHHHHHHHH--Hh
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK-REDAVRVVESTIN--HF 87 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~-~~~~~~~~~~~~~--~~ 87 (298)
.|++++|+|+ |++|...+..+...|++|++++++.++++.. .+.+.+. . .|.++ .+..+++.+ ... ..
T Consensus 168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~----~~lGa~~-~--~~~~~~~~~~~~i~~-~~~~~~g 238 (352)
T 1e3j_A 168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVA----KNCGADV-T--LVVDPAKEEESSIIE-RIRSAIG 238 (352)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHTTCSE-E--EECCTTTSCHHHHHH-HHHHHSS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH----HHhCCCE-E--EcCcccccHHHHHHH-HhccccC
Confidence 5889999997 8999999998888999998898887655433 3445442 2 24443 222222222 111 01
Q ss_pred CCccEEEECCC
Q 022386 88 GKLDILVNAAA 98 (298)
Q Consensus 88 ~~id~li~~ag 98 (298)
..+|++|+++|
T Consensus 239 ~g~D~vid~~g 249 (352)
T 1e3j_A 239 DLPNVTIDCSG 249 (352)
T ss_dssp SCCSEEEECSC
T ss_pred CCCCEEEECCC
Confidence 47999999998
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0033 Score=53.06 Aligned_cols=66 Identities=20% Similarity=0.293 Sum_probs=51.2
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
+|+++|.|+ ||.|++++..|++.|.+|.++.|+.++.+++. ++. +... ++.+. ...|
T Consensus 118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~-----~~~~--~~~~l--------------~~~D 174 (269)
T 3phh_A 118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLG-----CDCF--MEPPK--------------SAFD 174 (269)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHT-----CEEE--SSCCS--------------SCCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCC-----CeEe--cHHHh--------------ccCC
Confidence 899999997 99999999999999999999999988887776 442 2222 22221 1689
Q ss_pred EEEECCCCC
Q 022386 92 ILVNAAAGN 100 (298)
Q Consensus 92 ~li~~ag~~ 100 (298)
++||+....
T Consensus 175 iVInaTp~G 183 (269)
T 3phh_A 175 LIINATSAS 183 (269)
T ss_dssp EEEECCTTC
T ss_pred EEEEcccCC
Confidence 999998643
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=97.19 E-value=0.003 Score=53.99 Aligned_cols=89 Identities=12% Similarity=0.159 Sum_probs=65.8
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCCh------------------hHHHHHHHHHHhCCC--CeEEEE
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK------------------TVLRSAVAALHSLGI--PAIGLE 67 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~------------------~~~~~~~~~~~~~~~--~~~~~~ 67 (298)
.|++++|+|.|+ ||+|.++++.|+..|. ++.+++.+. .+.+...+.+.+..+ ++..+.
T Consensus 33 kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~ 111 (292)
T 3h8v_A 33 KIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHN 111 (292)
T ss_dssp GGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEec
Confidence 567789999976 7899999999999998 788998875 566666677766554 456667
Q ss_pred ccCCCHHHHHHHHHHHHHH----hCCccEEEECCC
Q 022386 68 GDVRKREDAVRVVESTINH----FGKLDILVNAAA 98 (298)
Q Consensus 68 ~Dls~~~~~~~~~~~~~~~----~~~id~li~~ag 98 (298)
.++++.+.++.+++.+... ....|++|.+..
T Consensus 112 ~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D 146 (292)
T 3h8v_A 112 YNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD 146 (292)
T ss_dssp CCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS
T ss_pred ccCCcHHHHHHHhhhhcccccccCCCCCEEEECCc
Confidence 7888777777776554321 137898887763
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=97.17 E-value=0.0011 Score=59.55 Aligned_cols=73 Identities=22% Similarity=0.299 Sum_probs=54.2
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
++.|++++|.|+ |++|+.+++.|...|+ +|++++|+.++.++.++.+ +.+ . .+.. ++...+
T Consensus 164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~---g~~--~--~~~~---~l~~~l------- 225 (404)
T 1gpj_A 164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL---GGE--A--VRFD---ELVDHL------- 225 (404)
T ss_dssp CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH---TCE--E--CCGG---GHHHHH-------
T ss_pred cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc---CCc--e--ecHH---hHHHHh-------
Confidence 578999999998 9999999999999999 8999999987766665554 322 1 2222 232222
Q ss_pred CCccEEEECCCC
Q 022386 88 GKLDILVNAAAG 99 (298)
Q Consensus 88 ~~id~li~~ag~ 99 (298)
...|++|++.+.
T Consensus 226 ~~aDvVi~at~~ 237 (404)
T 1gpj_A 226 ARSDVVVSATAA 237 (404)
T ss_dssp HTCSEEEECCSS
T ss_pred cCCCEEEEccCC
Confidence 378999999863
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00011 Score=62.56 Aligned_cols=71 Identities=17% Similarity=0.229 Sum_probs=50.4
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
++++|+++|+|+ ||.|++++..|++.|+ +|+++.|+.++.+++.+ .+... ..+++.. ..
T Consensus 114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~-------~~~~~-----~~~~~~~-------~~ 173 (277)
T 3don_A 114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL-------NINKI-----NLSHAES-------HL 173 (277)
T ss_dssp TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS-------CCEEE-----CHHHHHH-------TG
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-------hcccc-----cHhhHHH-------Hh
Confidence 578999999997 7999999999999999 89999999875444321 12211 1222222 22
Q ss_pred CCccEEEECCCC
Q 022386 88 GKLDILVNAAAG 99 (298)
Q Consensus 88 ~~id~li~~ag~ 99 (298)
...|++||+...
T Consensus 174 ~~aDiVInaTp~ 185 (277)
T 3don_A 174 DEFDIIINTTPA 185 (277)
T ss_dssp GGCSEEEECCC-
T ss_pred cCCCEEEECccC
Confidence 468999998764
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00079 Score=59.81 Aligned_cols=76 Identities=14% Similarity=0.226 Sum_probs=52.3
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
-.|++++|+||+|++|..++..+...|++|+++++ .++.+ .+.+.|.+.. +|..+.+-.+ .+.+ .++
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~----~~~~lGa~~v---~~~~~~~~~~----~~~~-~~g 248 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASE----LVRKLGADDV---IDYKSGSVEE----QLKS-LKP 248 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHH----HHHHTTCSEE---EETTSSCHHH----HHHT-SCC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHH----HHHHcCCCEE---EECCchHHHH----HHhh-cCC
Confidence 35899999999999999999998899999988874 44433 2334454432 2544432222 2222 258
Q ss_pred ccEEEECCC
Q 022386 90 LDILVNAAA 98 (298)
Q Consensus 90 id~li~~ag 98 (298)
+|++|+++|
T Consensus 249 ~D~vid~~g 257 (375)
T 2vn8_A 249 FDFILDNVG 257 (375)
T ss_dssp BSEEEESSC
T ss_pred CCEEEECCC
Confidence 999999998
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00098 Score=58.95 Aligned_cols=78 Identities=21% Similarity=0.193 Sum_probs=53.9
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|++++|+| +|++|...+..+...|++|++++++.++++.. .+.|.+.. .| .+.+++.+.+.++.. ..++
T Consensus 189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~----~~lGa~~v---i~-~~~~~~~~~v~~~~~-g~g~ 258 (363)
T 3uog_A 189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA----FALGADHG---IN-RLEEDWVERVYALTG-DRGA 258 (363)
T ss_dssp TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHHTCSEE---EE-TTTSCHHHHHHHHHT-TCCE
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH----HHcCCCEE---Ec-CCcccHHHHHHHHhC-CCCc
Confidence 488999999 89999999999989999999999987665543 23344322 24 332333333333322 1379
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|++|.++|
T Consensus 259 D~vid~~g 266 (363)
T 3uog_A 259 DHILEIAG 266 (363)
T ss_dssp EEEEEETT
T ss_pred eEEEECCC
Confidence 99999998
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0012 Score=58.38 Aligned_cols=85 Identities=19% Similarity=0.166 Sum_probs=53.4
Q ss_pred CC-cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCH--HHHHHHHHHHHH-H
Q 022386 11 KG-KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKR--EDAVRVVESTIN-H 86 (298)
Q Consensus 11 ~g-k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~--~~~~~~~~~~~~-~ 86 (298)
.| .+++|+|++|++|...+..+...|++|+++.++.+++.+..+.+.+.|.+..+ |..+. +++.+.+.++.. .
T Consensus 166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi---~~~~~~~~~~~~~i~~~t~~~ 242 (364)
T 1gu7_A 166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVI---TEDQNNSREFGPTIKEWIKQS 242 (364)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEE---EHHHHHCGGGHHHHHHHHHHH
T ss_pred CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEE---ecCccchHHHHHHHHHHhhcc
Confidence 47 89999999999999999888889999988877655433333334444544322 22110 122222222220 1
Q ss_pred hCCccEEEECCC
Q 022386 87 FGKLDILVNAAA 98 (298)
Q Consensus 87 ~~~id~li~~ag 98 (298)
.+++|++|.++|
T Consensus 243 ~~g~Dvvid~~G 254 (364)
T 1gu7_A 243 GGEAKLALNCVG 254 (364)
T ss_dssp TCCEEEEEESSC
T ss_pred CCCceEEEECCC
Confidence 247999999998
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0019 Score=56.57 Aligned_cols=122 Identities=9% Similarity=0.059 Sum_probs=72.9
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC--cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
=|+++.+.|+|++|.+|..++..++.+|. +|++++.+.++++....++.+.... ..++.-..+... .
T Consensus 5 ~~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~----~~~i~~t~d~~~-------a 73 (343)
T 3fi9_A 5 YLTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFE----GLNLTFTSDIKE-------A 73 (343)
T ss_dssp CSCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCT----TCCCEEESCHHH-------H
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCC----CCceEEcCCHHH-------H
Confidence 35578899999999999999999999985 7999999988777766666653110 011110011112 2
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcE-EEEecccc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGI-IINISATL 158 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~-iv~vss~~ 158 (298)
+...|++|.++|... ++ ..+. .+.++.|+.-...+.+ .+.+... .+. ++++|...
T Consensus 74 l~dADvVvitaG~p~-kp--G~~R---~dLl~~N~~I~~~i~~----~i~~~~p-------~a~~vlvvsNPv 129 (343)
T 3fi9_A 74 LTDAKYIVSSGGAPR-KE--GMTR---EDLLKGNAEIAAQLGK----DIKSYCP-------DCKHVIIIFNPA 129 (343)
T ss_dssp HTTEEEEEECCC----------CH---HHHHHHHHHHHHHHHH----HHHHHCT-------TCCEEEECSSSH
T ss_pred hCCCCEEEEccCCCC-CC--CCCH---HHHHHHHHHHHHHHHH----HHHHhcc-------CcEEEEEecCch
Confidence 247999999998532 11 1233 3345566655444444 4444321 463 67776654
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0045 Score=53.58 Aligned_cols=116 Identities=15% Similarity=0.157 Sum_probs=71.2
Q ss_pred EEEEecCCchhHHHHHHHHHHcC--CcEEEEcCChhHHHHHHHHHHhCCCC--eEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 14 VALLTGGGSGIGFEISLQLGKHG--AAIAIMGRRKTVLRSAVAALHSLGIP--AIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~~--~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
.+.|+|++|.+|..++..|+..| ..|++++++. .+....++.+.... +.... ...+.+.. +..
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~----~t~d~~~a-------~~~ 68 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYL----GPEQLPDC-------LKG 68 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEE----SGGGHHHH-------HTT
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEec----CCCCHHHH-------hCC
Confidence 68999999999999999999988 5799999986 34444455443222 22110 01122222 247
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
.|++|+.+|..... ..+.. +.+..|+.....+.+.+..+-. .+.++++|....
T Consensus 69 aDvVvi~ag~~~~~---g~~r~---dl~~~n~~i~~~i~~~i~~~~p-----------~a~viv~sNPv~ 121 (314)
T 1mld_A 69 CDVVVIPAGVPRKP---GMTRD---DLFNTNATIVATLTAACAQHCP-----------DAMICIISNPVN 121 (314)
T ss_dssp CSEEEECCSCCCCT---TCCGG---GGHHHHHHHHHHHHHHHHHHCT-----------TSEEEECSSCHH
T ss_pred CCEEEECCCcCCCC---CCcHH---HHHHHHHHHHHHHHHHHHhhCC-----------CeEEEEECCCcc
Confidence 99999999864321 12222 2355666655555555544321 477888877655
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=96.93 E-value=0.002 Score=56.31 Aligned_cols=77 Identities=17% Similarity=0.213 Sum_probs=54.4
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
-.|+++||+|+ |++|...+..+...|++|++++++.++.+. +++.+.+.. .|..+.+-.+.+.+ ..+.
T Consensus 165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~----~~~lGa~~~---i~~~~~~~~~~~~~----~~g~ 232 (340)
T 3s2e_A 165 RPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNL----ARRLGAEVA---VNARDTDPAAWLQK----EIGG 232 (340)
T ss_dssp CTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHH----HHHTTCSEE---EETTTSCHHHHHHH----HHSS
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHH----HHHcCCCEE---EeCCCcCHHHHHHH----hCCC
Confidence 35889999997 899999999888899999999998766553 334454432 25544333333222 3368
Q ss_pred ccEEEECCC
Q 022386 90 LDILVNAAA 98 (298)
Q Consensus 90 id~li~~ag 98 (298)
+|++|.++|
T Consensus 233 ~d~vid~~g 241 (340)
T 3s2e_A 233 AHGVLVTAV 241 (340)
T ss_dssp EEEEEESSC
T ss_pred CCEEEEeCC
Confidence 999999987
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0054 Score=54.96 Aligned_cols=79 Identities=20% Similarity=0.191 Sum_probs=52.3
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
-.|.++||+|+ |++|...+..+...|+ +|++++++.++++.. + +.|.+.. .|..+.+-.+. +.++.. ..
T Consensus 212 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~---~lGa~~v---i~~~~~~~~~~-i~~~t~-g~ 281 (404)
T 3ip1_A 212 RPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-K---ELGADHV---IDPTKENFVEA-VLDYTN-GL 281 (404)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-H---HHTCSEE---ECTTTSCHHHH-HHHHTT-TC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-H---HcCCCEE---EcCCCCCHHHH-HHHHhC-CC
Confidence 35889999998 9999999988888999 788888887655433 2 3343322 24444322222 222211 12
Q ss_pred CccEEEECCC
Q 022386 89 KLDILVNAAA 98 (298)
Q Consensus 89 ~id~li~~ag 98 (298)
++|++|.++|
T Consensus 282 g~D~vid~~g 291 (404)
T 3ip1_A 282 GAKLFLEATG 291 (404)
T ss_dssp CCSEEEECSS
T ss_pred CCCEEEECCC
Confidence 6999999998
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.91 E-value=0.00056 Score=59.53 Aligned_cols=77 Identities=16% Similarity=0.160 Sum_probs=50.5
Q ss_pred Cc-EEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 12 GK-VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 12 gk-~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
|. +++|+|++|++|..++..+...|++|++++++.++++.+ ++.+.+.. +|..+.+ ...+.++. .+.+
T Consensus 149 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~----~~lGa~~~---i~~~~~~--~~~~~~~~--~~~~ 217 (328)
T 1xa0_A 149 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL----RVLGAKEV---LAREDVM--AERIRPLD--KQRW 217 (328)
T ss_dssp GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH----HHTTCSEE---EECC-----------CC--SCCE
T ss_pred CCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH----HHcCCcEE---EecCCcH--HHHHHHhc--CCcc
Confidence 44 799999999999999999989999999999987665443 23454322 2444432 12222221 1479
Q ss_pred cEEEECCCC
Q 022386 91 DILVNAAAG 99 (298)
Q Consensus 91 d~li~~ag~ 99 (298)
|++|+++|.
T Consensus 218 d~vid~~g~ 226 (328)
T 1xa0_A 218 AAAVDPVGG 226 (328)
T ss_dssp EEEEECSTT
T ss_pred cEEEECCcH
Confidence 999999983
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0053 Score=51.31 Aligned_cols=81 Identities=17% Similarity=0.256 Sum_probs=57.1
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCCh-------------------hHHHHHHHHHHhCCCC--eEEE
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK-------------------TVLRSAVAALHSLGIP--AIGL 66 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~-------------------~~~~~~~~~~~~~~~~--~~~~ 66 (298)
.|++++|+|.|+ ||+|.++++.|+..|. ++.+++.+. .+.+.+.+.+.+.... +..+
T Consensus 25 ~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~ 103 (251)
T 1zud_1 25 KLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTAL 103 (251)
T ss_dssp HHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence 356789999997 6799999999999999 678886642 5666777777765444 4555
Q ss_pred EccCCCHHHHHHHHHHHHHHhCCccEEEECCC
Q 022386 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAA 98 (298)
Q Consensus 67 ~~Dls~~~~~~~~~~~~~~~~~~id~li~~ag 98 (298)
..+++. +.+..+++ ..|++|++..
T Consensus 104 ~~~~~~-~~~~~~~~-------~~DvVi~~~d 127 (251)
T 1zud_1 104 QQRLTG-EALKDAVA-------RADVVLDCTD 127 (251)
T ss_dssp CSCCCH-HHHHHHHH-------HCSEEEECCS
T ss_pred eccCCH-HHHHHHHh-------cCCEEEECCC
Confidence 555543 44444443 5898988763
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0026 Score=55.54 Aligned_cols=119 Identities=13% Similarity=0.180 Sum_probs=73.4
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCC--c-----EEEEcCCh--hHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHH
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGA--A-----IAIMGRRK--TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~--~-----Vv~~~r~~--~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
+.++||||+|.+|.+++..|+..|. . +++++.+. +.++....++.+...... .....++ ..
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~-~~~~~~~--~~------- 73 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL-KDVIATD--KE------- 73 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTE-EEEEEES--CH-------
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhccc-CCEEEcC--Cc-------
Confidence 5799999999999999999998876 5 99999974 356666667766432211 1111111 11
Q ss_pred HHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCc-EEEEecccc
Q 022386 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGG-IIINISATL 158 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g-~iv~vss~~ 158 (298)
.+.+...|++|+.||... ++ ..+. .+.++.|+.....+.+.+..+-. .+ ++++++...
T Consensus 74 ~~~~~daDvVvitAg~pr-kp--G~tR---~dll~~N~~i~~~i~~~i~~~~~-----------~~~~vivvsNPv 132 (333)
T 5mdh_A 74 EIAFKDLDVAILVGSMPR-RD--GMER---KDLLKANVKIFKCQGAALDKYAK-----------KSVKVIVVGNPA 132 (333)
T ss_dssp HHHTTTCSEEEECCSCCC-CT--TCCT---TTTHHHHHHHHHHHHHHHHHHSC-----------TTCEEEECSSSH
T ss_pred HHHhCCCCEEEEeCCCCC-CC--CCCH---HHHHHHHHHHHHHHHHHHHHhCC-----------CCeEEEEcCCch
Confidence 122347999999998532 11 1232 23466677665555555544321 35 477777655
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0059 Score=53.69 Aligned_cols=78 Identities=19% Similarity=0.279 Sum_probs=52.8
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCC--CHHHHHHHHHHHHHHh
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR--KREDAVRVVESTINHF 87 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls--~~~~~~~~~~~~~~~~ 87 (298)
.|.+++|+|+ |++|...+..+...|+ +|++++++.++++. +.+.+.+. . .|.. +.++..+.+.+...
T Consensus 171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~----a~~lGa~~-v--i~~~~~~~~~~~~~i~~~~~-- 240 (356)
T 1pl8_A 171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSK----AKEIGADL-V--LQISKESPQEIARKVEGQLG-- 240 (356)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH----HHHTTCSE-E--EECSSCCHHHHHHHHHHHHT--
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH----HHHhCCCE-E--EcCcccccchHHHHHHHHhC--
Confidence 4889999996 8999999988888999 89999988765443 23445442 2 2444 23333333333222
Q ss_pred CCccEEEECCC
Q 022386 88 GKLDILVNAAA 98 (298)
Q Consensus 88 ~~id~li~~ag 98 (298)
+++|++|.++|
T Consensus 241 ~g~D~vid~~g 251 (356)
T 1pl8_A 241 CKPEVTIECTG 251 (356)
T ss_dssp SCCSEEEECSC
T ss_pred CCCCEEEECCC
Confidence 57999999998
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0099 Score=51.61 Aligned_cols=119 Identities=13% Similarity=0.167 Sum_probs=71.2
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC--cEEEEcCChhHHHHHHHHHHhCC---CCeEEEEccCCCHHHHHHHHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
+.+++.+.|+|+ |.+|..++..|+..|. .|++++.+.++++....++.+.. ..+....-|
T Consensus 6 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~-------------- 70 (326)
T 3vku_A 6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE-------------- 70 (326)
T ss_dssp -CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC--------------
T ss_pred cCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc--------------
Confidence 445678999996 9999999999999988 79999999888887777776532 123322211
Q ss_pred HHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
.+.+...|++|+.||... ++ ..+. ...++.|.. +++.+.+.+.+.. ..+.+++++....
T Consensus 71 ~~a~~~aDiVvi~ag~~~-kp--G~tR---~dL~~~N~~----I~~~i~~~i~~~~-------p~a~ilvvtNPvd 129 (326)
T 3vku_A 71 YSDAKDADLVVITAGAPQ-KP--GETR---LDLVNKNLK----ILKSIVDPIVDSG-------FNGIFLVAANPVD 129 (326)
T ss_dssp GGGGTTCSEEEECCCCC--------------------------CHHHHHHHHHTTT-------CCSEEEECSSSHH
T ss_pred HHHhcCCCEEEECCCCCC-CC--CchH---HHHHHHHHH----HHHHHHHHHHhcC-------CceEEEEccCchH
Confidence 123458999999998532 11 1122 233455554 3455555555432 1577888877654
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0022 Score=56.92 Aligned_cols=79 Identities=16% Similarity=0.260 Sum_probs=54.1
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCC-HHHHHHHHHHHHHHhC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK-REDAVRVVESTINHFG 88 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~-~~~~~~~~~~~~~~~~ 88 (298)
.|+++||+|+ |++|...+..+...|+ +|++++++.++++.. ++.+.+.. .|.++ .+++.+.+.++.. +
T Consensus 192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~----~~lGa~~v---i~~~~~~~~~~~~~~~~~~--~ 261 (374)
T 1cdo_A 192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKA----KVFGATDF---VNPNDHSEPISQVLSKMTN--G 261 (374)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH----HHTTCCEE---ECGGGCSSCHHHHHHHHHT--S
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH----HHhCCceE---EeccccchhHHHHHHHHhC--C
Confidence 5889999995 9999999998888999 799999887765543 23444322 24442 1223343443332 4
Q ss_pred CccEEEECCCC
Q 022386 89 KLDILVNAAAG 99 (298)
Q Consensus 89 ~id~li~~ag~ 99 (298)
.+|++|+++|.
T Consensus 262 g~D~vid~~g~ 272 (374)
T 1cdo_A 262 GVDFSLECVGN 272 (374)
T ss_dssp CBSEEEECSCC
T ss_pred CCCEEEECCCC
Confidence 89999999983
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=96.80 E-value=0.023 Score=49.33 Aligned_cols=117 Identities=16% Similarity=0.164 Sum_probs=75.8
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCC--cEEEEcCChhHHHHHHHHHHhCC----CCeEEEEccCCCHHHHHHHHHHHH
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLG----IPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
+.+.+.|+|+ |.+|..++..|+..|. .|++++++.++++....++.+.. ..+.....| .
T Consensus 4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~--------------~ 68 (326)
T 3pqe_A 4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT--------------Y 68 (326)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC--------------G
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc--------------H
Confidence 3568999996 9999999999999997 79999999888777776776531 223332222 1
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
+.+...|++|..+|... ++ ..+..+ .++.|..- ++.+.+.+.+... .+.+++++....
T Consensus 69 ~a~~~aDvVvi~ag~p~-kp--G~~R~d---L~~~N~~I----v~~i~~~I~~~~p-------~a~vlvvtNPvd 126 (326)
T 3pqe_A 69 EDCKDADIVCICAGANQ-KP--GETRLE---LVEKNLKI----FKGIVSEVMASGF-------DGIFLVATNPVD 126 (326)
T ss_dssp GGGTTCSEEEECCSCCC-CT--TCCHHH---HHHHHHHH----HHHHHHHHHHTTC-------CSEEEECSSSHH
T ss_pred HHhCCCCEEEEecccCC-CC--CccHHH---HHHHHHHH----HHHHHHHHHHhcC-------CeEEEEcCChHH
Confidence 22357999999998532 21 234333 35555544 4444444444321 577888887654
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0024 Score=52.66 Aligned_cols=72 Identities=11% Similarity=0.062 Sum_probs=55.5
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
.+.++|.|+ |.+|+.+++.|.+.|+ |++++++.+..+... ..+.++..|.++++.++++ .....|
T Consensus 9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-------~~~~~i~gd~~~~~~l~~a------~i~~ad 73 (234)
T 2aef_A 9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-------SGANFVHGDPTRVSDLEKA------NVRGAR 73 (234)
T ss_dssp -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-------TTCEEEESCTTCHHHHHHT------TCTTCS
T ss_pred CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-------cCCeEEEcCCCCHHHHHhc------Ccchhc
Confidence 357889987 8999999999999999 999999876554332 2377889999999876654 124788
Q ss_pred EEEECCC
Q 022386 92 ILVNAAA 98 (298)
Q Consensus 92 ~li~~ag 98 (298)
.+|.+.+
T Consensus 74 ~vi~~~~ 80 (234)
T 2aef_A 74 AVIVDLE 80 (234)
T ss_dssp EEEECCS
T ss_pred EEEEcCC
Confidence 8888764
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.79 E-value=0.003 Score=55.74 Aligned_cols=77 Identities=18% Similarity=0.247 Sum_probs=53.5
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHc-CCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
.|.+++|+|+ |++|...+..+... |++|++++++.++++.+ .+.|.+.. .|..+. +.+.+.++.. ...
T Consensus 186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~----~~lGa~~v---i~~~~~--~~~~v~~~~~-g~g 254 (359)
T 1h2b_A 186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLA----ERLGADHV---VDARRD--PVKQVMELTR-GRG 254 (359)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHH----HHTTCSEE---EETTSC--HHHHHHHHTT-TCC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH----HHhCCCEE---Eeccch--HHHHHHHHhC-CCC
Confidence 5889999999 89999999888888 99999999887655433 33454332 255543 3333333321 127
Q ss_pred ccEEEECCC
Q 022386 90 LDILVNAAA 98 (298)
Q Consensus 90 id~li~~ag 98 (298)
+|++|.++|
T Consensus 255 ~Dvvid~~G 263 (359)
T 1h2b_A 255 VNVAMDFVG 263 (359)
T ss_dssp EEEEEESSC
T ss_pred CcEEEECCC
Confidence 999999998
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0068 Score=54.32 Aligned_cols=43 Identities=14% Similarity=0.150 Sum_probs=37.9
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSA 52 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~ 52 (298)
.+.+++++|+|+ |.+|+.+++.+...|++|++++++.+.++..
T Consensus 169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~ 211 (401)
T 1x13_A 169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV 211 (401)
T ss_dssp EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 467999999996 8999999999999999999999998766554
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0036 Score=55.45 Aligned_cols=74 Identities=20% Similarity=0.253 Sum_probs=53.4
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|.++||+|+ |++|...+..+...|++|++++++.++++...+ .+.+. ..|..+.+.+++ +. +.+
T Consensus 194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~----lGa~~---vi~~~~~~~~~~----~~---~g~ 258 (369)
T 1uuf_A 194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA----LGADE---VVNSRNADEMAA----HL---KSF 258 (369)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----HTCSE---EEETTCHHHHHT----TT---TCE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCcE---EeccccHHHHHH----hh---cCC
Confidence 4889999998 899999999888899999999988776654432 34332 235666543322 21 589
Q ss_pred cEEEECCCC
Q 022386 91 DILVNAAAG 99 (298)
Q Consensus 91 d~li~~ag~ 99 (298)
|++|.++|.
T Consensus 259 Dvvid~~g~ 267 (369)
T 1uuf_A 259 DFILNTVAA 267 (369)
T ss_dssp EEEEECCSS
T ss_pred CEEEECCCC
Confidence 999999984
|
| >3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0013 Score=56.03 Aligned_cols=46 Identities=15% Similarity=0.165 Sum_probs=39.6
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVA 54 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~ 54 (298)
.++++|+++|.|+ ||.|++++..|.+.|+ +|+++.|+.++.+++++
T Consensus 118 ~~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~ 164 (282)
T 3fbt_A 118 VEIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYG 164 (282)
T ss_dssp CCCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCT
T ss_pred CCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence 3578999999997 6999999999999999 89999999877665544
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0025 Score=56.54 Aligned_cols=79 Identities=18% Similarity=0.275 Sum_probs=53.6
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCC-HHHHHHHHHHHHHHhC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK-REDAVRVVESTINHFG 88 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~-~~~~~~~~~~~~~~~~ 88 (298)
.|++++|+|+ |++|..++..+...|+ +|++++++.++++.. ++.+.+.. .|.++ .+++.+.+.++.. +
T Consensus 191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~----~~lGa~~v---i~~~~~~~~~~~~~~~~~~--~ 260 (374)
T 2jhf_A 191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA----KEVGATEC---VNPQDYKKPIQEVLTEMSN--G 260 (374)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH----HHTTCSEE---ECGGGCSSCHHHHHHHHTT--S
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----HHhCCceE---ecccccchhHHHHHHHHhC--C
Confidence 5889999995 9999999998888999 799999887765543 33454322 24432 1223333333322 4
Q ss_pred CccEEEECCCC
Q 022386 89 KLDILVNAAAG 99 (298)
Q Consensus 89 ~id~li~~ag~ 99 (298)
.+|++|.++|.
T Consensus 261 g~D~vid~~g~ 271 (374)
T 2jhf_A 261 GVDFSFEVIGR 271 (374)
T ss_dssp CBSEEEECSCC
T ss_pred CCcEEEECCCC
Confidence 79999999983
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0028 Score=56.15 Aligned_cols=79 Identities=18% Similarity=0.234 Sum_probs=53.2
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCC-HHHHHHHHHHHHHHhC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK-REDAVRVVESTINHFG 88 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~-~~~~~~~~~~~~~~~~ 88 (298)
.|.++||+|+ |++|...+..+...|+ +|++++++.++.+... . .+.+.. .|.++ .+++.+.+.++.. +
T Consensus 190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~---lGa~~v---i~~~~~~~~~~~~v~~~~~--~ 259 (373)
T 2fzw_A 190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-E---FGATEC---INPQDFSKPIQEVLIEMTD--G 259 (373)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-H---HTCSEE---ECGGGCSSCHHHHHHHHTT--S
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-H---cCCceE---eccccccccHHHHHHHHhC--C
Confidence 4889999996 9999999998888999 7999998877655432 2 243322 24432 1223333333322 4
Q ss_pred CccEEEECCCC
Q 022386 89 KLDILVNAAAG 99 (298)
Q Consensus 89 ~id~li~~ag~ 99 (298)
.+|++|.++|.
T Consensus 260 g~D~vid~~g~ 270 (373)
T 2fzw_A 260 GVDYSFECIGN 270 (373)
T ss_dssp CBSEEEECSCC
T ss_pred CCCEEEECCCc
Confidence 79999999983
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0029 Score=56.30 Aligned_cols=80 Identities=15% Similarity=0.171 Sum_probs=54.3
Q ss_pred CCcEEEEec-CCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 11 KGKVALLTG-GGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 11 ~gk~~lVtG-~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
.|.+++|.| |+|++|...+..+...|++|++++++.++.+.+ .+.+.+.. .|..+.+-.+.+ .++... ..
T Consensus 170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~----~~lGa~~~---~~~~~~~~~~~v-~~~t~~-~g 240 (379)
T 3iup_A 170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLL----KAQGAVHV---CNAASPTFMQDL-TEALVS-TG 240 (379)
T ss_dssp TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHH----HHTTCSCE---EETTSTTHHHHH-HHHHHH-HC
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH----HhCCCcEE---EeCCChHHHHHH-HHHhcC-CC
Confidence 478899997 999999999998888999999999887655433 33454432 244443322222 222221 27
Q ss_pred ccEEEECCCC
Q 022386 90 LDILVNAAAG 99 (298)
Q Consensus 90 id~li~~ag~ 99 (298)
+|++|.++|.
T Consensus 241 ~d~v~d~~g~ 250 (379)
T 3iup_A 241 ATIAFDATGG 250 (379)
T ss_dssp CCEEEESCEE
T ss_pred ceEEEECCCc
Confidence 9999999983
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0079 Score=53.25 Aligned_cols=78 Identities=14% Similarity=0.086 Sum_probs=53.0
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
-.|++++|+|++|++|...+..+...|++|+++. +.++++ .+++.|.+.. .|..+.+ +.+.+.++. .++
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~----~~~~lGa~~v---i~~~~~~-~~~~v~~~t--~g~ 231 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD----LAKSRGAEEV---FDYRAPN-LAQTIRTYT--KNN 231 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH----HHHHTTCSEE---EETTSTT-HHHHHHHHT--TTC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH----HHHHcCCcEE---EECCCch-HHHHHHHHc--cCC
Confidence 5689999999999999999999989999988876 444433 3344454322 2554433 222223222 146
Q ss_pred ccEEEECCC
Q 022386 90 LDILVNAAA 98 (298)
Q Consensus 90 id~li~~ag 98 (298)
+|+++.++|
T Consensus 232 ~d~v~d~~g 240 (371)
T 3gqv_A 232 LRYALDCIT 240 (371)
T ss_dssp CCEEEESSC
T ss_pred ccEEEECCC
Confidence 999999998
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0027 Score=56.09 Aligned_cols=77 Identities=17% Similarity=0.204 Sum_probs=52.1
Q ss_pred CCcEEEEecCCchhHHHHHHHHHH-cCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGK-HGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~-~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
.|++++|+||+|++|...+..+.. .|++|++++++.++++.+ .+.|.+.. .|..+ ++...+.++ ..+.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~----~~lGad~v---i~~~~--~~~~~v~~~--~~~g 239 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWV----KSLGAHHV---IDHSK--PLAAEVAAL--GLGA 239 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHH----HHTTCSEE---ECTTS--CHHHHHHTT--CSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHH----HHcCCCEE---EeCCC--CHHHHHHHh--cCCC
Confidence 588999999999999988876665 488999999987655433 34454432 24443 222222222 2248
Q ss_pred ccEEEECCC
Q 022386 90 LDILVNAAA 98 (298)
Q Consensus 90 id~li~~ag 98 (298)
+|+++.++|
T Consensus 240 ~Dvvid~~g 248 (363)
T 4dvj_A 240 PAFVFSTTH 248 (363)
T ss_dssp EEEEEECSC
T ss_pred ceEEEECCC
Confidence 999999987
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* | Back alignment and structure |
|---|
Probab=96.68 E-value=0.0033 Score=55.74 Aligned_cols=79 Identities=18% Similarity=0.228 Sum_probs=53.6
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCC-HHHHHHHHHHHHHHhC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK-REDAVRVVESTINHFG 88 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~-~~~~~~~~~~~~~~~~ 88 (298)
.|.+++|+|+ |++|...+..+...|+ +|++++++.++++.. .+.+.+.. .|.++ .+++.+.+.++.. +
T Consensus 195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a----~~lGa~~v---i~~~~~~~~~~~~v~~~~~--~ 264 (376)
T 1e3i_A 195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA----KALGATDC---LNPRELDKPVQDVITELTA--G 264 (376)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH----HHTTCSEE---ECGGGCSSCHHHHHHHHHT--S
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----HHhCCcEE---EccccccchHHHHHHHHhC--C
Confidence 4889999996 9999999998888999 799999887765533 33454322 24432 1223333333332 4
Q ss_pred CccEEEECCCC
Q 022386 89 KLDILVNAAAG 99 (298)
Q Consensus 89 ~id~li~~ag~ 99 (298)
.+|++|.++|.
T Consensus 265 g~Dvvid~~G~ 275 (376)
T 1e3i_A 265 GVDYSLDCAGT 275 (376)
T ss_dssp CBSEEEESSCC
T ss_pred CccEEEECCCC
Confidence 89999999983
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0023 Score=56.40 Aligned_cols=83 Identities=13% Similarity=0.175 Sum_probs=51.1
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|.++||+|++|++|...+..+...|++++++.++.+..++..+.+++.|.+..+ |..+ ...+. +.++....+++
T Consensus 167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi---~~~~-~~~~~-~~~~~~~~~~~ 241 (357)
T 1zsy_A 167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVI---TEEE-LRRPE-MKNFFKDMPQP 241 (357)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEE---EHHH-HHSGG-GGGTTSSSCCC
T ss_pred CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEE---ecCc-chHHH-HHHHHhCCCCc
Confidence 5889999999999999999888888998887766543333333444555654322 2111 11111 11111112359
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|++|.++|
T Consensus 242 Dvvid~~g 249 (357)
T 1zsy_A 242 RLALNCVG 249 (357)
T ss_dssp SEEEESSC
T ss_pred eEEEECCC
Confidence 99999987
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=96.63 E-value=0.049 Score=46.18 Aligned_cols=42 Identities=21% Similarity=0.255 Sum_probs=35.8
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHH
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA 55 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~ 55 (298)
+++.|.|+ |.+|..+|..|++.|++|++.+++.+.+++..+.
T Consensus 5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~ 46 (283)
T 4e12_A 5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR 46 (283)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence 57777765 7899999999999999999999998877766554
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0038 Score=54.68 Aligned_cols=76 Identities=14% Similarity=0.162 Sum_probs=52.1
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHc--CCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKH--GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
.|++++|+|+ |++|...+..+... |++|++++++.++.+... +.+.+.. .|..+. ....+++.+ ..
T Consensus 170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~v---i~~~~~---~~~~~~~~~-g~ 237 (344)
T 2h6e_A 170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL----ELGADYV---SEMKDA---ESLINKLTD-GL 237 (344)
T ss_dssp SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH----HHTCSEE---ECHHHH---HHHHHHHHT-TC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH----HhCCCEE---eccccc---hHHHHHhhc-CC
Confidence 7899999999 89999999988888 999999998876654432 2343322 233220 122333332 13
Q ss_pred CccEEEECCC
Q 022386 89 KLDILVNAAA 98 (298)
Q Consensus 89 ~id~li~~ag 98 (298)
++|++|.++|
T Consensus 238 g~D~vid~~g 247 (344)
T 2h6e_A 238 GASIAIDLVG 247 (344)
T ss_dssp CEEEEEESSC
T ss_pred CccEEEECCC
Confidence 7999999998
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0019 Score=57.01 Aligned_cols=75 Identities=23% Similarity=0.267 Sum_probs=51.9
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|++++|+|+ |++|..++..+...|++|++++++.++++.+.+ .+.+.. + |..+..+ +.+.+. +++
T Consensus 179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~----lGa~~v-~--~~~~~~~---~~~~~~---~~~ 244 (360)
T 1piw_A 179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK----MGADHY-I--ATLEEGD---WGEKYF---DTF 244 (360)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH----HTCSEE-E--EGGGTSC---HHHHSC---SCE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH----cCCCEE-E--cCcCchH---HHHHhh---cCC
Confidence 5889999999 999999999888899999999988776554332 343322 2 3333201 112222 589
Q ss_pred cEEEECCCC
Q 022386 91 DILVNAAAG 99 (298)
Q Consensus 91 d~li~~ag~ 99 (298)
|++|.++|.
T Consensus 245 D~vid~~g~ 253 (360)
T 1piw_A 245 DLIVVCASS 253 (360)
T ss_dssp EEEEECCSC
T ss_pred CEEEECCCC
Confidence 999999984
|
| >3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* | Back alignment and structure |
|---|
Probab=96.61 E-value=0.012 Score=51.19 Aligned_cols=89 Identities=19% Similarity=0.182 Sum_probs=56.7
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCCh-------------------hHHHHHHHHHHhCCCCeE--EE
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK-------------------TVLRSAVAALHSLGIPAI--GL 66 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~-------------------~~~~~~~~~~~~~~~~~~--~~ 66 (298)
.|++++|+|.|+ ||+|.++++.|+..|. ++.+++++. .+.+...+.+.+..+.+. .+
T Consensus 31 kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~ 109 (340)
T 3rui_A 31 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV 109 (340)
T ss_dssp HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEE
Confidence 467889999976 7899999999999999 688887753 456666677776655444 44
Q ss_pred EccC-------CCHHHHHHHHHHHHHHhCCccEEEECCC
Q 022386 67 EGDV-------RKREDAVRVVESTINHFGKLDILVNAAA 98 (298)
Q Consensus 67 ~~Dl-------s~~~~~~~~~~~~~~~~~~id~li~~ag 98 (298)
..++ ++++....-.+.+.+.+...|++|++.-
T Consensus 110 ~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tD 148 (340)
T 3rui_A 110 KLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD 148 (340)
T ss_dssp CCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCS
T ss_pred eccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCC
Confidence 4333 2221111111222222346898888774
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=96.60 E-value=0.018 Score=50.87 Aligned_cols=83 Identities=18% Similarity=0.184 Sum_probs=56.9
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccC-----------CCHHHHHH
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDV-----------RKREDAVR 78 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl-----------s~~~~~~~ 78 (298)
+.+++++|.|+ |.+|..+++.+...|++|++++++.++++...+ .|. .++..|+ ..++....
T Consensus 182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~----lGa--~~~~l~~~~~~~~gya~~~~~~~~~~ 254 (381)
T 3p2y_A 182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS----VGA--QWLDLGIDAAGEGGYARELSEAERAQ 254 (381)
T ss_dssp ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH----TTC--EECCCC-------------CHHHHHH
T ss_pred cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCC--eEEeccccccccccchhhhhHHHHhh
Confidence 47889999998 799999999999999999999999877665543 232 2222221 01111233
Q ss_pred HHHHHHHHhCCccEEEECCCC
Q 022386 79 VVESTINHFGKLDILVNAAAG 99 (298)
Q Consensus 79 ~~~~~~~~~~~id~li~~ag~ 99 (298)
-.+.+.+.....|++|+++.+
T Consensus 255 ~~~~l~e~l~~aDIVI~tv~i 275 (381)
T 3p2y_A 255 QQQALEDAITKFDIVITTALV 275 (381)
T ss_dssp HHHHHHHHHTTCSEEEECCCC
T ss_pred hHHHHHHHHhcCCEEEECCCC
Confidence 344455555789999998754
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.58 E-value=0.015 Score=51.57 Aligned_cols=80 Identities=16% Similarity=0.268 Sum_probs=53.8
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcC-CcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCC--CHHHHHHHHHHHHHHh
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR--KREDAVRVVESTINHF 87 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls--~~~~~~~~~~~~~~~~ 87 (298)
.|+++||+| +|++|...+..+...| ++|++++++.++++.+ ++.+.+. .+ |.. +.+++.+.+.++.. -
T Consensus 195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~----~~lGa~~-vi--~~~~~~~~~~~~~v~~~~~-g 265 (380)
T 1vj0_A 195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLA----EEIGADL-TL--NRRETSVEERRKAIMDITH-G 265 (380)
T ss_dssp BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH----HHTTCSE-EE--ETTTSCHHHHHHHHHHHTT-T
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHH----HHcCCcE-EE--eccccCcchHHHHHHHHhC-C
Confidence 488999999 8999999999888899 5999999987655433 3445432 22 433 23444333333221 1
Q ss_pred CCccEEEECCCC
Q 022386 88 GKLDILVNAAAG 99 (298)
Q Consensus 88 ~~id~li~~ag~ 99 (298)
..+|++|.++|.
T Consensus 266 ~g~Dvvid~~g~ 277 (380)
T 1vj0_A 266 RGADFILEATGD 277 (380)
T ss_dssp SCEEEEEECSSC
T ss_pred CCCcEEEECCCC
Confidence 269999999983
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0026 Score=53.33 Aligned_cols=42 Identities=17% Similarity=0.228 Sum_probs=36.2
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSA 52 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~ 52 (298)
.++| +++|.|+ ||.|++++..|++.|+ +|+++.|+.++.+++
T Consensus 106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~l 148 (253)
T 3u62_A 106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKAL 148 (253)
T ss_dssp CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTC
T ss_pred CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence 5678 8999987 8999999999999999 899999997765543
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0035 Score=54.99 Aligned_cols=69 Identities=19% Similarity=0.283 Sum_probs=51.1
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|.+++|+|+ |++|...+..+...|++|++++++.++.+.+ .+.|.+..+ ++.+.+++ .+
T Consensus 176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~----~~lGa~~v~-----~~~~~~~~----------~~ 235 (348)
T 3two_A 176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDA----LSMGVKHFY-----TDPKQCKE----------EL 235 (348)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHH----HHTTCSEEE-----SSGGGCCS----------CE
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH----HhcCCCeec-----CCHHHHhc----------CC
Confidence 5889999997 9999999998888999999999887765533 344554433 33332211 79
Q ss_pred cEEEECCCC
Q 022386 91 DILVNAAAG 99 (298)
Q Consensus 91 d~li~~ag~ 99 (298)
|+++.++|.
T Consensus 236 D~vid~~g~ 244 (348)
T 3two_A 236 DFIISTIPT 244 (348)
T ss_dssp EEEEECCCS
T ss_pred CEEEECCCc
Confidence 999999984
|
| >1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1 | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0056 Score=54.01 Aligned_cols=47 Identities=21% Similarity=0.304 Sum_probs=41.2
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL 56 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~ 56 (298)
+|+||+++|+|. |.+|..+|+.|.+.|++|++.+++.+++++..+.+
T Consensus 170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ 216 (364)
T 1leh_A 170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE 216 (364)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence 799999999987 78999999999999999999999887776666554
|
| >4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major} | Back alignment and structure |
|---|
Probab=96.53 E-value=0.051 Score=47.49 Aligned_cols=128 Identities=11% Similarity=0.140 Sum_probs=73.1
Q ss_pred CCCCCCCCCCcEEEEecCCchhHHHHHHHHHHcCC-------cEEEEcCChh--HHHHHHHHHHhCCCC--eEEEEccCC
Q 022386 3 SPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGA-------AIAIMGRRKT--VLRSAVAALHSLGIP--AIGLEGDVR 71 (298)
Q Consensus 3 ~~~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~-------~Vv~~~r~~~--~~~~~~~~~~~~~~~--~~~~~~Dls 71 (298)
++..+..++.-.|.|+||+|+||..++..|+.... .+++++.+.. .++...-++.+.... ...... +
T Consensus 15 ~~~~~~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~--~ 92 (345)
T 4h7p_A 15 QTQGPGSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVT--A 92 (345)
T ss_dssp -------CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEE--S
T ss_pred cccCCCCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEc--C
Confidence 34566777888999999999999999999987543 5888888653 345555666664322 222211 1
Q ss_pred CHHHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEE
Q 022386 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGII 151 (298)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~i 151 (298)
+. . +.+...|++|..||... ++ ..+.+++ ++.|.. +++.+.+.+.+... +...|
T Consensus 93 ~~---~-------~a~~~advVvi~aG~pr-kp--GmtR~DL---l~~Na~----I~~~~~~~i~~~a~------~~~~v 146 (345)
T 4h7p_A 93 DP---R-------VAFDGVAIAIMCGAFPR-KA--GMERKDL---LEMNAR----IFKEQGEAIAAVAA------SDCRV 146 (345)
T ss_dssp CH---H-------HHTTTCSEEEECCCCCC-CT--TCCHHHH---HHHHHH----HHHHHHHHHHHHSC------TTCEE
T ss_pred Ch---H-------HHhCCCCEEEECCCCCC-CC--CCCHHHH---HHHhHH----HHHHHHHHHHhhcc------CceEE
Confidence 21 1 22458999999999642 22 3466554 455554 45555555554321 03445
Q ss_pred EEecccc
Q 022386 152 INISATL 158 (298)
Q Consensus 152 v~vss~~ 158 (298)
+.++...
T Consensus 147 lvvsNPv 153 (345)
T 4h7p_A 147 VVVGNPA 153 (345)
T ss_dssp EECSSSH
T ss_pred EEeCCCc
Confidence 5666543
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0048 Score=49.88 Aligned_cols=42 Identities=26% Similarity=0.406 Sum_probs=36.6
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHH
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA 55 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~ 55 (298)
+++|+||+|.+|.++++.|+++|++|++++|+.+..++..+.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~ 43 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE 43 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 588999999999999999999999999999998766665443
|
| >3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0024 Score=56.74 Aligned_cols=78 Identities=13% Similarity=0.203 Sum_probs=54.0
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCC-HHHHHHHHHHHHHHhC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK-REDAVRVVESTINHFG 88 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~-~~~~~~~~~~~~~~~~ 88 (298)
.|.+++|+|+ |++|...+..+...|+ +|++++++.++++. +.+.|.+.. .|..+ .+++.+.+.++.. +
T Consensus 193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~----a~~lGa~~v---i~~~~~~~~~~~~i~~~~~--g 262 (378)
T 3uko_A 193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYET----AKKFGVNEF---VNPKDHDKPIQEVIVDLTD--G 262 (378)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHH----HHTTTCCEE---ECGGGCSSCHHHHHHHHTT--S
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH----HHHcCCcEE---EccccCchhHHHHHHHhcC--C
Confidence 4889999998 9999999998888999 79999988876553 234454332 24432 2233333333322 4
Q ss_pred CccEEEECCC
Q 022386 89 KLDILVNAAA 98 (298)
Q Consensus 89 ~id~li~~ag 98 (298)
.+|++|.++|
T Consensus 263 g~D~vid~~g 272 (378)
T 3uko_A 263 GVDYSFECIG 272 (378)
T ss_dssp CBSEEEECSC
T ss_pred CCCEEEECCC
Confidence 8999999998
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=96.46 E-value=0.04 Score=47.75 Aligned_cols=118 Identities=14% Similarity=0.147 Sum_probs=71.9
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhC------CCCeEEEEccCCCHHHHHHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSL------GIPAIGLEGDVRKREDAVRVVE 81 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dls~~~~~~~~~~ 81 (298)
.|+.+.+.|+|+ |.+|.+++..|+..|. +|++++++.++++....++.+. ..++... .| .
T Consensus 4 ~m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t-~d---~-------- 70 (324)
T 3gvi_A 4 SMARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGA-ND---Y-------- 70 (324)
T ss_dssp --CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE-SS---G--------
T ss_pred CCcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEe-CC---H--------
Confidence 356678999998 9999999999999998 9999999987766555555432 2223221 12 1
Q ss_pred HHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 82 STINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 82 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
+.+..-|++|..+|.... + ..+.. ..+..|.. +++.+.+.+.+... .+.+++++....
T Consensus 71 ---~a~~~aDiVIiaag~p~k-~--G~~R~---dl~~~N~~----i~~~i~~~i~~~~p-------~a~iivvtNPvd 128 (324)
T 3gvi_A 71 ---AAIEGADVVIVTAGVPRK-P--GMSRD---DLLGINLK----VMEQVGAGIKKYAP-------EAFVICITNPLD 128 (324)
T ss_dssp ---GGGTTCSEEEECCSCCCC--------C---HHHHHHHH----HHHHHHHHHHHHCT-------TCEEEECCSSHH
T ss_pred ---HHHCCCCEEEEccCcCCC-C--CCCHH---HHHHhhHH----HHHHHHHHHHHHCC-------CeEEEecCCCcH
Confidence 123578999999985321 1 11222 23444544 44444555444321 477888877654
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0038 Score=55.27 Aligned_cols=79 Identities=20% Similarity=0.273 Sum_probs=51.4
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH-HHhC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI-NHFG 88 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~-~~~~ 88 (298)
.|.++||+|+ |++|...+..+...|+ .|++++++.++.+ .++. .|.+.. .|.++.+-.+. +.+.. ...+
T Consensus 182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~-~a~~---lGa~~v---i~~~~~~~~~~-i~~~~~~~~g 252 (370)
T 4ej6_A 182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRR-LAEE---VGATAT---VDPSAGDVVEA-IAGPVGLVPG 252 (370)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHH-HHHH---HTCSEE---ECTTSSCHHHH-HHSTTSSSTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HHHH---cCCCEE---ECCCCcCHHHH-HHhhhhccCC
Confidence 4889999998 8999999998888999 7888888876544 3333 344322 35554332222 22100 0124
Q ss_pred CccEEEECCC
Q 022386 89 KLDILVNAAA 98 (298)
Q Consensus 89 ~id~li~~ag 98 (298)
++|++|.++|
T Consensus 253 g~Dvvid~~G 262 (370)
T 4ej6_A 253 GVDVVIECAG 262 (370)
T ss_dssp CEEEEEECSC
T ss_pred CCCEEEECCC
Confidence 8999999987
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0043 Score=54.93 Aligned_cols=79 Identities=24% Similarity=0.317 Sum_probs=52.7
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCC-HHHHHHHHHHHHHHhC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK-REDAVRVVESTINHFG 88 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~-~~~~~~~~~~~~~~~~ 88 (298)
.|++++|+|+ |++|...+..+...|+ +|++++++.++++.. ++.+.+.. .|..+ .+++.+.+.++.. +
T Consensus 191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a----~~lGa~~v---i~~~~~~~~~~~~i~~~t~--g 260 (373)
T 1p0f_A 191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA----IELGATEC---LNPKDYDKPIYEVICEKTN--G 260 (373)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH----HHTTCSEE---ECGGGCSSCHHHHHHHHTT--S
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH----HHcCCcEE---EecccccchHHHHHHHHhC--C
Confidence 4889999995 9999999988888899 788998887765533 33454322 24332 1223333333322 4
Q ss_pred CccEEEECCCC
Q 022386 89 KLDILVNAAAG 99 (298)
Q Consensus 89 ~id~li~~ag~ 99 (298)
.+|++|.++|.
T Consensus 261 g~Dvvid~~g~ 271 (373)
T 1p0f_A 261 GVDYAVECAGR 271 (373)
T ss_dssp CBSEEEECSCC
T ss_pred CCCEEEECCCC
Confidence 89999999983
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0043 Score=54.65 Aligned_cols=75 Identities=13% Similarity=0.121 Sum_probs=53.0
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|.+++|+|+ |++|...+..+...|++|++++++.++.+...+ +.+.+.. .|..+.+.+++ ..+.+
T Consensus 180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~---~lGa~~v---i~~~~~~~~~~-------~~~g~ 245 (357)
T 2cf5_A 180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQ---DLGADDY---VIGSDQAKMSE-------LADSL 245 (357)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHT---TSCCSCE---EETTCHHHHHH-------STTTE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH---HcCCcee---eccccHHHHHH-------hcCCC
Confidence 6899999995 999999999888899999999998765543321 3454322 24455433322 22479
Q ss_pred cEEEECCCC
Q 022386 91 DILVNAAAG 99 (298)
Q Consensus 91 d~li~~ag~ 99 (298)
|++|.++|.
T Consensus 246 D~vid~~g~ 254 (357)
T 2cf5_A 246 DYVIDTVPV 254 (357)
T ss_dssp EEEEECCCS
T ss_pred CEEEECCCC
Confidence 999999984
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=96.41 E-value=0.014 Score=49.58 Aligned_cols=41 Identities=15% Similarity=0.188 Sum_probs=36.3
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHH
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAV 53 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~ 53 (298)
+++.|.|++|.+|.++++.|++.|++|++++|+.+..+...
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~ 52 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQ 52 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence 47999999999999999999999999999999977665544
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0046 Score=53.57 Aligned_cols=73 Identities=16% Similarity=0.273 Sum_probs=50.4
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|.+++|+||+|++|...+..+...|++|+++.++ ++ . +.+++.+.+. . .|..+.+.+.+ ....+
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~-~~-~---~~~~~lGa~~-~--i~~~~~~~~~~-------~~~g~ 216 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASK-RN-H---AFLKALGAEQ-C--INYHEEDFLLA-------ISTPV 216 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECH-HH-H---HHHHHHTCSE-E--EETTTSCHHHH-------CCSCE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc-ch-H---HHHHHcCCCE-E--EeCCCcchhhh-------hccCC
Confidence 58899999999999999999999999999888743 33 2 2333445443 2 24444332221 12589
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|+++.++|
T Consensus 217 D~v~d~~g 224 (321)
T 3tqh_A 217 DAVIDLVG 224 (321)
T ss_dssp EEEEESSC
T ss_pred CEEEECCC
Confidence 99999998
|
| >3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=96.37 E-value=0.05 Score=46.97 Aligned_cols=117 Identities=15% Similarity=0.181 Sum_probs=72.3
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCC--hhHHHHHHHHHHhC------CCCeEEEEccCCCHHHHHHHH
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR--KTVLRSAVAALHSL------GIPAIGLEGDVRKREDAVRVV 80 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~--~~~~~~~~~~~~~~------~~~~~~~~~Dls~~~~~~~~~ 80 (298)
++.+.+.|+|+ |.+|..++..|+..|. +|++++++ .+..+....++.+. ..++... .| .
T Consensus 6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t-~d---~------- 73 (315)
T 3tl2_A 6 IKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT-SD---Y------- 73 (315)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE-SC---G-------
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc-CC---H-------
Confidence 45678999997 9999999999999999 99999998 44444444444321 1222221 11 1
Q ss_pred HHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 81 ESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 81 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
+.+...|++|..+|... ++ ..+..+ .++.|..-...+.+.+..+ .. .+.+++++....
T Consensus 74 ----~a~~~aDvVIiaag~p~-kp--g~~R~d---l~~~N~~i~~~i~~~i~~~----~p-------~a~vlvvsNPvd 131 (315)
T 3tl2_A 74 ----ADTADSDVVVITAGIAR-KP--GMSRDD---LVATNSKIMKSITRDIAKH----SP-------NAIIVVLTNPVD 131 (315)
T ss_dssp ----GGGTTCSEEEECCSCCC-CT--TCCHHH---HHHHHHHHHHHHHHHHHHH----CT-------TCEEEECCSSHH
T ss_pred ----HHhCCCCEEEEeCCCCC-CC--CCCHHH---HHHHHHHHHHHHHHHHHHh----CC-------CeEEEECCChHH
Confidence 23468999999998632 21 234433 4555655444444444433 21 477888876543
|
| >3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=96.30 E-value=0.006 Score=51.59 Aligned_cols=39 Identities=23% Similarity=0.315 Sum_probs=36.0
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
.+++||+++|.|.++-+|+.++..|..+|++|.++.++.
T Consensus 156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t 194 (285)
T 3p2o_A 156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT 194 (285)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc
Confidence 478999999999999999999999999999999998753
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.29 E-value=0.018 Score=51.29 Aligned_cols=43 Identities=12% Similarity=0.188 Sum_probs=37.6
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHH
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAV 53 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~ 53 (298)
+.+.+++|.|+ |.+|..+++.+...|++|++++++...++...
T Consensus 188 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~ 230 (405)
T 4dio_A 188 VPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVA 230 (405)
T ss_dssp ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence 56789999999 79999999999999999999999987655543
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=96.22 E-value=0.0066 Score=53.41 Aligned_cols=75 Identities=17% Similarity=0.331 Sum_probs=51.4
Q ss_pred CCCcEEEEecCCchhHHHH-HHHH-HHcCCc-EEEEcCChh---HHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHH
Q 022386 10 LKGKVALLTGGGSGIGFEI-SLQL-GKHGAA-IAIMGRRKT---VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~i-a~~l-~~~G~~-Vv~~~r~~~---~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
+.+++++|+|+ |++|... +..+ ...|++ |++++++.+ +.+.+ .+.|. +.+ |..+. ++.+ +.++
T Consensus 171 ~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~----~~lGa--~~v--~~~~~-~~~~-i~~~ 239 (357)
T 2b5w_A 171 WDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII----EELDA--TYV--DSRQT-PVED-VPDV 239 (357)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH----HHTTC--EEE--ETTTS-CGGG-HHHH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH----HHcCC--ccc--CCCcc-CHHH-HHHh
Confidence 44589999999 9999999 7766 678997 999998876 54433 33443 222 55443 2333 3333
Q ss_pred HHHhCCccEEEECCC
Q 022386 84 INHFGKLDILVNAAA 98 (298)
Q Consensus 84 ~~~~~~id~li~~ag 98 (298)
.+.+|++|.++|
T Consensus 240 ---~gg~Dvvid~~g 251 (357)
T 2b5w_A 240 ---YEQMDFIYEATG 251 (357)
T ss_dssp ---SCCEEEEEECSC
T ss_pred ---CCCCCEEEECCC
Confidence 248999999998
|
| >1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* | Back alignment and structure |
|---|
Probab=96.20 E-value=0.14 Score=43.71 Aligned_cols=115 Identities=10% Similarity=0.074 Sum_probs=71.7
Q ss_pred EEEEecCCchhHHHHHHHHHHcCC--cEEEEcCChhHHHHHHHHHHhC----CCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
.+.|+|+ |.+|.+++..|+..|. +|++++++.+.++....++.+. ......... +|. +.+
T Consensus 2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~-----------~a~ 67 (294)
T 1oju_A 2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADY-----------SLL 67 (294)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCG-----------GGG
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCH-----------HHh
Confidence 5889999 9999999999999998 8999999987766443333321 122222211 111 123
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
..-|++|..+|... ++ ..+..++ ++.|. -+++.+.+.+.+... .+.++++|....
T Consensus 68 ~~aDiVViaag~~~-kp--G~~R~dl---~~~N~----~i~~~i~~~i~~~~p-------~a~iivvsNPvd 122 (294)
T 1oju_A 68 KGSEIIVVTAGLAR-KP--GMTRLDL---AHKNA----GIIKDIAKKIVENAP-------ESKILVVTNPMD 122 (294)
T ss_dssp TTCSEEEECCCCCC-CS--SCCHHHH---HHHHH----HHHHHHHHHHHTTST-------TCEEEECSSSHH
T ss_pred CCCCEEEECCCCCC-CC--CCcHHHH---HHHHH----HHHHHHHHHHHhhCC-------CeEEEEeCCcch
Confidence 47899999998632 11 2344433 44443 455666666655431 577888887654
|
| >4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A | Back alignment and structure |
|---|
Probab=96.18 E-value=0.025 Score=52.93 Aligned_cols=89 Identities=19% Similarity=0.194 Sum_probs=58.5
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCCh-------------------hHHHHHHHHHHhCCCCe--EEE
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK-------------------TVLRSAVAALHSLGIPA--IGL 66 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~-------------------~~~~~~~~~~~~~~~~~--~~~ 66 (298)
.|++.+|+|.|+ ||+|.++++.|+..|. ++.+++.+. .+.+.+.+.+.+..+.+ ..+
T Consensus 323 kL~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~ 401 (615)
T 4gsl_A 323 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV 401 (615)
T ss_dssp HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEe
Confidence 467889999987 6899999999999999 688888864 46666777777765544 444
Q ss_pred EccC-------CCHHHHHHHHHHHHHHhCCccEEEECCC
Q 022386 67 EGDV-------RKREDAVRVVESTINHFGKLDILVNAAA 98 (298)
Q Consensus 67 ~~Dl-------s~~~~~~~~~~~~~~~~~~id~li~~ag 98 (298)
..++ ++++...--.+.+.+.+...|++|++..
T Consensus 402 ~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tD 440 (615)
T 4gsl_A 402 KLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD 440 (615)
T ss_dssp CCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCS
T ss_pred eccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCC
Confidence 4443 2322111111222223346898888874
|
| >3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A | Back alignment and structure |
|---|
Probab=96.12 E-value=0.0068 Score=53.20 Aligned_cols=77 Identities=21% Similarity=0.221 Sum_probs=51.0
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh--
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-- 87 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-- 87 (298)
.|.+++|+|+ |++|...+..+...|+ +|++++++.++++.. + +.+.+.. .|..+.+-. +.+.+..
T Consensus 166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~---~lGa~~v---i~~~~~~~~----~~v~~~t~g 233 (352)
T 3fpc_A 166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIA-L---EYGATDI---INYKNGDIV----EQILKATDG 233 (352)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHH-H---HHTCCEE---ECGGGSCHH----HHHHHHTTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-H---HhCCceE---EcCCCcCHH----HHHHHHcCC
Confidence 4889999985 9999999988888999 799999887654432 2 3344322 244333222 2222222
Q ss_pred CCccEEEECCCC
Q 022386 88 GKLDILVNAAAG 99 (298)
Q Consensus 88 ~~id~li~~ag~ 99 (298)
.++|+++.++|.
T Consensus 234 ~g~D~v~d~~g~ 245 (352)
T 3fpc_A 234 KGVDKVVIAGGD 245 (352)
T ss_dssp CCEEEEEECSSC
T ss_pred CCCCEEEECCCC
Confidence 269999999884
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=96.10 E-value=0.013 Score=52.78 Aligned_cols=40 Identities=10% Similarity=0.132 Sum_probs=34.3
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHH
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAV 53 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~ 53 (298)
..++|.|. |.+|+.+++.|.++|..|++++++.+..+...
T Consensus 5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~ 44 (413)
T 3l9w_A 5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLR 44 (413)
T ss_dssp CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHH
T ss_pred CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
Confidence 46888886 77999999999999999999999987665543
|
| >3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=96.07 E-value=0.037 Score=46.30 Aligned_cols=88 Identities=10% Similarity=0.174 Sum_probs=57.7
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCc-EEEEcCChhHHHHHHHHHH--------hCCCCeEEEEccCCCHHHHHHHH
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSAVAALH--------SLGIPAIGLEGDVRKREDAVRVV 80 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~--------~~~~~~~~~~~Dls~~~~~~~~~ 80 (298)
+.++++.|.|+ |.+|..++..|.+.|++ |.+++|+.+..++..+.+. +.-.+++.+..-+. ...+..++
T Consensus 8 ~~~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~-~~~~~~v~ 85 (266)
T 3d1l_A 8 IEDTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLK-DSAFAELL 85 (266)
T ss_dssp GGGCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCC-HHHHHHHH
T ss_pred CCCCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecC-HHHHHHHH
Confidence 34557888986 99999999999999998 8899999877776655421 11112233322333 33567777
Q ss_pred HHHHHHhCCccEEEECCCC
Q 022386 81 ESTINHFGKLDILVNAAAG 99 (298)
Q Consensus 81 ~~~~~~~~~id~li~~ag~ 99 (298)
+.+.....+=.++|++.+.
T Consensus 86 ~~l~~~~~~~~ivv~~s~~ 104 (266)
T 3d1l_A 86 QGIVEGKREEALMVHTAGS 104 (266)
T ss_dssp HHHHTTCCTTCEEEECCTT
T ss_pred HHHHhhcCCCcEEEECCCC
Confidence 7776544344567787754
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=96.06 E-value=0.014 Score=51.95 Aligned_cols=43 Identities=14% Similarity=0.131 Sum_probs=37.6
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSA 52 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~ 52 (298)
.+.+++++|+|+ |++|+.+++.+...|++|++++++..+++..
T Consensus 169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~ 211 (384)
T 1l7d_A 169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQV 211 (384)
T ss_dssp EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 568999999996 8999999999999999999999987665543
|
| >3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A | Back alignment and structure |
|---|
Probab=96.05 E-value=0.01 Score=49.89 Aligned_cols=36 Identities=8% Similarity=0.180 Sum_probs=34.2
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCC
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR 45 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~ 45 (298)
++||+++|.|.++-+|+.++..|..+|++|.++.++
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~ 183 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK 183 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence 899999999999999999999999999999999775
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=96.05 E-value=0.024 Score=48.49 Aligned_cols=84 Identities=11% Similarity=0.077 Sum_probs=58.9
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHH-------HHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA-------LHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
+++.|.| .|.+|..++..|++.|++|++.+|+.++.+++.+. +.+.-. .+++..-+.+...++..++.+..
T Consensus 16 ~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~~~l~~ 93 (296)
T 3qha_A 16 LKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVVGELAG 93 (296)
T ss_dssp CCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHHHHHHT
T ss_pred CeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHHHHHHH
Confidence 4677776 68899999999999999999999998766655431 111111 34455566777788888887776
Q ss_pred HhCCccEEEECCC
Q 022386 86 HFGKLDILVNAAA 98 (298)
Q Consensus 86 ~~~~id~li~~ag 98 (298)
...+-.++|++..
T Consensus 94 ~l~~g~ivv~~st 106 (296)
T 3qha_A 94 HAKPGTVIAIHST 106 (296)
T ss_dssp TCCTTCEEEECSC
T ss_pred hcCCCCEEEEeCC
Confidence 5555566777664
|
| >1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.05 E-value=0.012 Score=51.90 Aligned_cols=77 Identities=16% Similarity=0.269 Sum_probs=50.3
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
.|++++|+|+ |++|...+..+...|+ .|++++++.++++.. + +.+.+.. + |..+.+ +.+.+.++. .+.
T Consensus 190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a-~---~lGa~~v-i--~~~~~~-~~~~~~~~~--~gg 258 (371)
T 1f8f_A 190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-K---QLGATHV-I--NSKTQD-PVAAIKEIT--DGG 258 (371)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-H---HHTCSEE-E--ETTTSC-HHHHHHHHT--TSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-H---HcCCCEE-e--cCCccC-HHHHHHHhc--CCC
Confidence 4789999995 9999999988888899 588898887655433 2 2343322 2 443322 222222221 137
Q ss_pred ccEEEECCC
Q 022386 90 LDILVNAAA 98 (298)
Q Consensus 90 id~li~~ag 98 (298)
+|++|.++|
T Consensus 259 ~D~vid~~g 267 (371)
T 1f8f_A 259 VNFALESTG 267 (371)
T ss_dssp EEEEEECSC
T ss_pred CcEEEECCC
Confidence 999999998
|
| >1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.03 E-value=0.014 Score=52.16 Aligned_cols=79 Identities=15% Similarity=0.185 Sum_probs=52.3
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
.|++++|.|+ |++|...+..+...|+ .|++++++.++++.. ++.|.+ . +|.++.+.+.+.+.++.. ...
T Consensus 185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a----~~lGa~--~--i~~~~~~~~~~~v~~~t~-g~g 254 (398)
T 1kol_A 185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA----KAQGFE--I--ADLSLDTPLHEQIAALLG-EPE 254 (398)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH----HHTTCE--E--EETTSSSCHHHHHHHHHS-SSC
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH----HHcCCc--E--EccCCcchHHHHHHHHhC-CCC
Confidence 5889999995 9999999988888999 688888887655433 344542 2 355443322222222221 126
Q ss_pred ccEEEECCCC
Q 022386 90 LDILVNAAAG 99 (298)
Q Consensus 90 id~li~~ag~ 99 (298)
+|++|.++|.
T Consensus 255 ~Dvvid~~G~ 264 (398)
T 1kol_A 255 VDCAVDAVGF 264 (398)
T ss_dssp EEEEEECCCT
T ss_pred CCEEEECCCC
Confidence 9999999985
|
| >4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=95.98 E-value=0.01 Score=50.23 Aligned_cols=39 Identities=23% Similarity=0.305 Sum_probs=35.7
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
-+++||.++|.|.++-+|+.++..|...|++|.++.++.
T Consensus 157 i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T 195 (286)
T 4a5o_A 157 ADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT 195 (286)
T ss_dssp CCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC
Confidence 478999999999999999999999999999999997753
|
| >1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A* | Back alignment and structure |
|---|
Probab=95.95 E-value=0.12 Score=44.17 Aligned_cols=39 Identities=18% Similarity=0.354 Sum_probs=34.4
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHH
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSA 52 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~ 52 (298)
+++.|.|+ |.+|..+|..|++.|++|++++++.+.+++.
T Consensus 16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~ 54 (302)
T 1f0y_A 16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKS 54 (302)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH
Confidence 56888887 8999999999999999999999998776654
|
| >4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... | Back alignment and structure |
|---|
Probab=95.93 E-value=0.18 Score=43.78 Aligned_cols=120 Identities=8% Similarity=0.082 Sum_probs=77.0
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC--cEEEEcCChhHHHHHHHHHHhCC---CCeEEEEccCCCHHHHHHHHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
....+.+.|+|+ |.+|..++..|+.+|. .|++++.+.++++....++.+.. .....+..+ |.
T Consensus 16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~--d~---------- 82 (331)
T 4aj2_A 16 QVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSK--DY---------- 82 (331)
T ss_dssp -CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECS--SG----------
T ss_pred cCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcC--CH----------
Confidence 456778999997 9999999999999987 79999999888888777776531 111222221 11
Q ss_pred HHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
+.+...|++|..+|... ++ ..+.. +.++.|..-...+.+.+..+ .. .+.+++++....
T Consensus 83 -~~~~~aDiVvi~aG~~~-kp--G~tR~---dL~~~N~~I~~~i~~~i~~~----~p-------~a~vlvvtNPvd 140 (331)
T 4aj2_A 83 -SVTANSKLVIITAGARQ-QE--GESRL---NLVQRNVNIFKFIIPNVVKY----SP-------QCKLLIVSNPVD 140 (331)
T ss_dssp -GGGTTEEEEEECCSCCC-CT--TCCGG---GGHHHHHHHHHHHHHHHHHH----CT-------TCEEEECSSSHH
T ss_pred -HHhCCCCEEEEccCCCC-CC--CccHH---HHHHHHHHHHHHHHHHHHHH----CC-------CeEEEEecChHH
Confidence 12357999999998632 21 23333 24555555444444444443 21 577888887654
|
| >4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} | Back alignment and structure |
|---|
Probab=95.92 E-value=0.013 Score=49.87 Aligned_cols=39 Identities=23% Similarity=0.287 Sum_probs=35.9
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
.+++||.++|.|.++-+|+.++..|...|++|.++.++.
T Consensus 161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T 199 (300)
T 4a26_A 161 IEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGT 199 (300)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTS
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCC
Confidence 478999999999999999999999999999999998754
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=95.89 E-value=0.016 Score=49.60 Aligned_cols=74 Identities=16% Similarity=0.308 Sum_probs=52.7
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
..++.|++++|.|+ |++|+++++.|...|++|++++|+.++.+... +.+. ..+. . ++++++
T Consensus 152 ~~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~----~~g~--~~~~--~---~~l~~~------- 212 (300)
T 2rir_A 152 DYTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARIT----EMGL--VPFH--T---DELKEH------- 212 (300)
T ss_dssp SSCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTTC--EEEE--G---GGHHHH-------
T ss_pred CCCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----HCCC--eEEc--h---hhHHHH-------
Confidence 35789999999996 89999999999999999999999876544332 2232 2221 1 122222
Q ss_pred hCCccEEEECCCC
Q 022386 87 FGKLDILVNAAAG 99 (298)
Q Consensus 87 ~~~id~li~~ag~ 99 (298)
....|++|++...
T Consensus 213 l~~aDvVi~~~p~ 225 (300)
T 2rir_A 213 VKDIDICINTIPS 225 (300)
T ss_dssp STTCSEEEECCSS
T ss_pred hhCCCEEEECCCh
Confidence 2478999999873
|
| >3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A | Back alignment and structure |
|---|
Probab=95.88 E-value=0.013 Score=51.55 Aligned_cols=80 Identities=20% Similarity=0.244 Sum_probs=57.8
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCCh-------------------hHHHHHHHHHHhCCC--CeEEE
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK-------------------TVLRSAVAALHSLGI--PAIGL 66 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~-------------------~~~~~~~~~~~~~~~--~~~~~ 66 (298)
.|++++|+|.|+ ||+|.++++.|+..|. ++.+++++. .+.+.+.+.+.+..+ ++..+
T Consensus 115 ~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~ 193 (353)
T 3h5n_A 115 KLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEI 193 (353)
T ss_dssp HHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEe
Confidence 356789999987 8899999999999999 688888763 355566666666544 45566
Q ss_pred EccCCCHHHHHHHHHHHHHHhCCccEEEECC
Q 022386 67 EGDVRKREDAVRVVESTINHFGKLDILVNAA 97 (298)
Q Consensus 67 ~~Dls~~~~~~~~~~~~~~~~~~id~li~~a 97 (298)
..++++...+. + +...|++|.+.
T Consensus 194 ~~~i~~~~~~~-------~-~~~~DlVvd~~ 216 (353)
T 3h5n_A 194 ALNINDYTDLH-------K-VPEADIWVVSA 216 (353)
T ss_dssp ECCCCSGGGGG-------G-SCCCSEEEECC
T ss_pred ecccCchhhhh-------H-hccCCEEEEec
Confidence 67777654222 2 45889888876
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=95.88 E-value=0.016 Score=48.11 Aligned_cols=77 Identities=9% Similarity=0.023 Sum_probs=55.4
Q ss_pred EEEEecCCchhHHHHHHHHHHc-CCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 14 VALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
.++|.|++|.+|+.+++.+.+. |+.|+.+....+.+++... ...+ +.+|++.++.+...++.+.+. ++++
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~----~~~D---vvIDfT~p~a~~~~~~~a~~~--g~~~ 72 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD----GNTE---VVIDFTHPDVVMGNLEFLIDN--GIHA 72 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH----TTCC---EEEECSCTTTHHHHHHHHHHT--TCEE
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc----cCCc---EEEEccChHHHHHHHHHHHHc--CCCE
Confidence 5899999999999999999876 8888754433333333221 1222 557999999988888877664 7888
Q ss_pred EEECCCC
Q 022386 93 LVNAAAG 99 (298)
Q Consensus 93 li~~ag~ 99 (298)
+|-..|.
T Consensus 73 VigTTG~ 79 (245)
T 1p9l_A 73 VVGTTGF 79 (245)
T ss_dssp EECCCCC
T ss_pred EEcCCCC
Confidence 8888763
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=95.88 E-value=0.12 Score=44.72 Aligned_cols=119 Identities=13% Similarity=0.138 Sum_probs=73.3
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhC----CCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
|+.+.+.|+|+ |.+|.+++..|+..|. +|++++++.++.+....++.+. +........+ +.
T Consensus 3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~--d~----------- 68 (321)
T 3p7m_A 3 MARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTN--DY----------- 68 (321)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES--CG-----------
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcC--CH-----------
Confidence 34567888885 9999999999999988 8999999988777666666543 1122222111 11
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
+.+...|++|..+|... ++ ..+..+ .+..|..- ++.+.+.+.+... .+.+++++....
T Consensus 69 ~a~~~aDvVIi~ag~p~-k~--G~~R~d---l~~~N~~i----~~~i~~~i~~~~p-------~a~vivvtNPvd 126 (321)
T 3p7m_A 69 KDLENSDVVIVTAGVPR-KP--GMSRDD---LLGINIKV----MQTVGEGIKHNCP-------NAFVICITNPLD 126 (321)
T ss_dssp GGGTTCSEEEECCSCCC-CT--TCCHHH---HHHHHHHH----HHHHHHHHHHHCT-------TCEEEECCSSHH
T ss_pred HHHCCCCEEEEcCCcCC-CC--CCCHHH---HHHHhHHH----HHHHHHHHHHHCC-------CcEEEEecCchH
Confidence 12347899999998532 11 234433 34445544 4444444444321 467888876554
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=95.84 E-value=0.052 Score=48.39 Aligned_cols=79 Identities=16% Similarity=0.209 Sum_probs=52.4
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
.|.+++|.|+ |++|...+..+...|+ +|++++++.++++. +.+.+. ..+ |..+.+-+.+.+.++.. ...
T Consensus 185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~----a~~lGa--~~i--~~~~~~~~~~~~~~~~~-g~g 254 (398)
T 2dph_A 185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKL----LSDAGF--ETI--DLRNSAPLRDQIDQILG-KPE 254 (398)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHH----HHTTTC--EEE--ETTSSSCHHHHHHHHHS-SSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHH----HHHcCC--cEE--cCCCcchHHHHHHHHhC-CCC
Confidence 5889999996 9999999988888899 89999998765543 334454 333 54442211222222221 126
Q ss_pred ccEEEECCCC
Q 022386 90 LDILVNAAAG 99 (298)
Q Consensus 90 id~li~~ag~ 99 (298)
+|++|.++|.
T Consensus 255 ~Dvvid~~g~ 264 (398)
T 2dph_A 255 VDCGVDAVGF 264 (398)
T ss_dssp EEEEEECSCT
T ss_pred CCEEEECCCC
Confidence 9999999984
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=95.84 E-value=0.04 Score=47.61 Aligned_cols=88 Identities=13% Similarity=0.100 Sum_probs=58.4
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHH-------HHhCCCCeEEEEccCCCHHHHHHHHH-
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA-------LHSLGIPAIGLEGDVRKREDAVRVVE- 81 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~Dls~~~~~~~~~~- 81 (298)
...+++.|.|. |.+|..++..|++.|++|++.+|+.++.+++.+. +.+.-.+.+++..-+.+...++..+.
T Consensus 29 ~~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~ 107 (320)
T 4dll_A 29 PYARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFA 107 (320)
T ss_dssp CCCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTT
T ss_pred cCCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcc
Confidence 34567888855 8899999999999999999999998776665331 11100123334445566667777775
Q ss_pred -HHHHHhCCccEEEECCC
Q 022386 82 -STINHFGKLDILVNAAA 98 (298)
Q Consensus 82 -~~~~~~~~id~li~~ag 98 (298)
.+.....+-.++|+...
T Consensus 108 ~~~~~~l~~~~~vi~~st 125 (320)
T 4dll_A 108 QGVAAAMKPGSLFLDMAS 125 (320)
T ss_dssp TCHHHHCCTTCEEEECSC
T ss_pred hhHHhhCCCCCEEEecCC
Confidence 55555455566776654
|
| >3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=95.83 E-value=0.014 Score=49.39 Aligned_cols=38 Identities=21% Similarity=0.195 Sum_probs=35.2
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCC
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR 45 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~ 45 (298)
.+++||.++|.|.++-+|+.++..|..+|++|.++.++
T Consensus 157 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 194 (285)
T 3l07_A 157 IKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF 194 (285)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence 47899999999999999999999999999999998765
|
| >2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A | Back alignment and structure |
|---|
Probab=95.82 E-value=0.0087 Score=50.68 Aligned_cols=44 Identities=25% Similarity=0.276 Sum_probs=37.9
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAV 53 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~ 53 (298)
++++++++|.|+ |++|++++..|.+.|++|++++|+.++.+++.
T Consensus 126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~ 169 (275)
T 2hk9_A 126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLA 169 (275)
T ss_dssp TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHT
T ss_pred CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH
Confidence 578899999996 79999999999999999999999976655443
|
| >2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A* | Back alignment and structure |
|---|
Probab=95.80 E-value=0.018 Score=48.25 Aligned_cols=69 Identities=22% Similarity=0.278 Sum_probs=51.2
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
+++| +++|.|+ |++|++++..|.+.|++|.+++|+.++.+++.+.+. . . . .+. +. . .
T Consensus 114 ~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~---~--~---~--~~~---~~-------~-~ 170 (263)
T 2d5c_A 114 PLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFG---L--R---A--VPL---EK-------A-R 170 (263)
T ss_dssp CCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHT---C--E---E--CCG---GG-------G-G
T ss_pred CCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc---c--c---h--hhH---hh-------c-c
Confidence 6788 9999996 779999999999999999999999877666655542 2 1 1 121 11 1 2
Q ss_pred CccEEEECCCCC
Q 022386 89 KLDILVNAAAGN 100 (298)
Q Consensus 89 ~id~li~~ag~~ 100 (298)
..|++|++....
T Consensus 171 ~~Divi~~tp~~ 182 (263)
T 2d5c_A 171 EARLLVNATRVG 182 (263)
T ss_dssp GCSEEEECSSTT
T ss_pred CCCEEEEccCCC
Confidence 689999998753
|
| >3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* | Back alignment and structure |
|---|
Probab=95.79 E-value=0.17 Score=43.63 Aligned_cols=118 Identities=14% Similarity=0.189 Sum_probs=72.4
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCC--cEEEEcCChhHHHHHHHHHHhC----CCCeEEEEccCCCHHHHHHHHHHH
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
++.+.+.|+|+ |.+|..++..|+.+|. .|++++.+.++++....++.+. +.++.... | +
T Consensus 4 m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~----------- 68 (317)
T 3d0o_A 4 FKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--E----------- 68 (317)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--C-----------
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--C-----------
Confidence 34568999998 9999999999999885 7999999977666554444431 12233222 2 1
Q ss_pred HHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
.+.+...|++|..+|.... + ..+..+ .+..|.. +++.+.+.+.+... .+.++++|....
T Consensus 69 ~~a~~~aDvVvi~ag~~~~-~--g~~r~d---l~~~n~~----i~~~i~~~i~~~~p-------~a~viv~tNPv~ 127 (317)
T 3d0o_A 69 YSDCHDADLVVICAGAAQK-P--GETRLD---LVSKNLK----IFKSIVGEVMASKF-------DGIFLVATNPVD 127 (317)
T ss_dssp GGGGTTCSEEEECCCCCCC-T--TCCHHH---HHHHHHH----HHHHHHHHHHHTTC-------CSEEEECSSSHH
T ss_pred HHHhCCCCEEEECCCCCCC-C--CCcHHH---HHHHHHH----HHHHHHHHHHHhCC-------CcEEEEecCcHH
Confidence 1223589999999986322 1 223332 2344443 44455555554421 577777766554
|
| >1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2 | Back alignment and structure |
|---|
Probab=95.74 E-value=0.016 Score=49.09 Aligned_cols=39 Identities=21% Similarity=0.187 Sum_probs=35.9
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
.+++||.++|.|++.-+|+.+++.|+..|++|.++.++.
T Consensus 155 i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t 193 (288)
T 1b0a_A 155 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT 193 (288)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC
T ss_pred CCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc
Confidence 478999999999999999999999999999999997664
|
| >3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=95.73 E-value=0.12 Score=43.65 Aligned_cols=83 Identities=17% Similarity=0.122 Sum_probs=57.4
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCC---cEEEEcCChhHHHHHHHHH--------Hh--CCCCeEEEEccCCCHHHHHH
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGA---AIAIMGRRKTVLRSAVAAL--------HS--LGIPAIGLEGDVRKREDAVR 78 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~---~Vv~~~r~~~~~~~~~~~~--------~~--~~~~~~~~~~Dls~~~~~~~ 78 (298)
.+++.|.|+ |.+|.+++..|++.|+ +|++++|+.+..++..+.+ .+ ...++.++.+ .+..++.
T Consensus 3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~~~ 78 (280)
T 3tri_A 3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQIKM 78 (280)
T ss_dssp CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGHHH
T ss_pred CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHHHH
Confidence 356788877 8999999999999998 8999999988777765531 00 1234444433 3456777
Q ss_pred HHHHHHHH-hCCccEEEECCC
Q 022386 79 VVESTINH-FGKLDILVNAAA 98 (298)
Q Consensus 79 ~~~~~~~~-~~~id~li~~ag 98 (298)
+++++... +.+=.++|++++
T Consensus 79 vl~~l~~~~l~~~~iiiS~~a 99 (280)
T 3tri_A 79 VCEELKDILSETKILVISLAV 99 (280)
T ss_dssp HHHHHHHHHHTTTCEEEECCT
T ss_pred HHHHHHhhccCCCeEEEEecC
Confidence 77777655 443337887765
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* | Back alignment and structure |
|---|
Probab=95.72 E-value=0.034 Score=48.50 Aligned_cols=77 Identities=14% Similarity=0.100 Sum_probs=50.7
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHc-CCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
.|.+++|+|+ |++|...+..+... |++|++++++.++++. +++.|.+..+ |..+ + ..+.+.++.. ...
T Consensus 171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~----~~~lGa~~~i---~~~~-~-~~~~v~~~t~-g~g 239 (345)
T 3jv7_A 171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLAL----AREVGADAAV---KSGA-G-AADAIRELTG-GQG 239 (345)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHH----HHHTTCSEEE---ECST-T-HHHHHHHHHG-GGC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHH----HHHcCCCEEE---cCCC-c-HHHHHHHHhC-CCC
Confidence 5889999998 99999988877777 7789999998765543 3344544322 3232 2 2222222221 127
Q ss_pred ccEEEECCC
Q 022386 90 LDILVNAAA 98 (298)
Q Consensus 90 id~li~~ag 98 (298)
+|+++.++|
T Consensus 240 ~d~v~d~~G 248 (345)
T 3jv7_A 240 ATAVFDFVG 248 (345)
T ss_dssp EEEEEESSC
T ss_pred CeEEEECCC
Confidence 999999998
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=95.71 E-value=0.099 Score=45.41 Aligned_cols=73 Identities=12% Similarity=0.090 Sum_probs=50.8
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhC------CCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSL------GIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
+.+.|+|+ |.+|.+++..|+..|. +|++++++.+.++.....+.+. ..++.+. +|.+ ..+
T Consensus 10 ~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t----~d~~---ea~----- 76 (331)
T 1pzg_A 10 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE----YSYE---AAL----- 76 (331)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE----CSHH---HHH-----
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEe----CCHH---HHh-----
Confidence 47899998 9999999999999998 9999999987777644443321 1222221 2222 122
Q ss_pred HhCCccEEEECCCCC
Q 022386 86 HFGKLDILVNAAAGN 100 (298)
Q Consensus 86 ~~~~id~li~~ag~~ 100 (298)
...|++|..+|..
T Consensus 77 --~~aDiVi~a~g~p 89 (331)
T 1pzg_A 77 --TGADCVIVTAGLT 89 (331)
T ss_dssp --TTCSEEEECCSCS
T ss_pred --CCCCEEEEccCCC
Confidence 3789999999853
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=95.69 E-value=0.032 Score=47.33 Aligned_cols=85 Identities=14% Similarity=0.061 Sum_probs=56.8
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHH-------HHhCCCCeEEEEccCCCHHHHHHHH---HH
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA-------LHSLGIPAIGLEGDVRKREDAVRVV---ES 82 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~Dls~~~~~~~~~---~~ 82 (298)
+++.|.| .|.+|..++..|++.|++|++.+|+.++.++..+. +.+.-.+.+.+..-+.+...++..+ +.
T Consensus 2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~ 80 (287)
T 3pef_A 2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHG 80 (287)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcch
Confidence 4677887 58999999999999999999999998776655431 1110001233444566667777777 66
Q ss_pred HHHHhCCccEEEECCC
Q 022386 83 TINHFGKLDILVNAAA 98 (298)
Q Consensus 83 ~~~~~~~id~li~~ag 98 (298)
+.....+=.++|+..+
T Consensus 81 l~~~l~~~~~vi~~st 96 (287)
T 3pef_A 81 VLEGIGEGRGYVDMST 96 (287)
T ss_dssp HHHHCCTTCEEEECSC
T ss_pred HhhcCCCCCEEEeCCC
Confidence 6655444456777654
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=95.68 E-value=0.022 Score=48.59 Aligned_cols=72 Identities=15% Similarity=0.331 Sum_probs=51.2
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
.++.|++++|.| .|++|+++++.|...|++|++++|+.+..+.. .+.+. ..+ +. ++++.+ +
T Consensus 151 ~~l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~----~~~g~--~~~--~~---~~l~~~-------l 211 (293)
T 3d4o_A 151 FTIHGANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDLLARI----AEMGM--EPF--HI---SKAAQE-------L 211 (293)
T ss_dssp SCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHTTS--EEE--EG---GGHHHH-------T
T ss_pred CCCCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHHHHHH----HHCCC--eec--Ch---hhHHHH-------h
Confidence 478999999999 58999999999999999999999987654332 23332 222 11 122222 3
Q ss_pred CCccEEEECCC
Q 022386 88 GKLDILVNAAA 98 (298)
Q Consensus 88 ~~id~li~~ag 98 (298)
...|+++++..
T Consensus 212 ~~aDvVi~~~p 222 (293)
T 3d4o_A 212 RDVDVCINTIP 222 (293)
T ss_dssp TTCSEEEECCS
T ss_pred cCCCEEEECCC
Confidence 47999999875
|
| >3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=95.68 E-value=0.0032 Score=56.39 Aligned_cols=35 Identities=17% Similarity=0.359 Sum_probs=32.1
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEE-EEcC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIA-IMGR 44 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv-~~~r 44 (298)
+|+||+++|+| .|.+|..+++.|.+.|++|+ +.++
T Consensus 215 ~l~gk~vaVqG-~GnVG~~~a~~L~~~GakVVavsD~ 250 (419)
T 3aoe_E 215 DLRGARVVVQG-LGQVGAAVALHAERLGMRVVAVATS 250 (419)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEEcC
Confidence 78999999998 78899999999999999998 6777
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=95.68 E-value=0.018 Score=52.50 Aligned_cols=75 Identities=15% Similarity=0.166 Sum_probs=58.1
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
.+.++|.|+ |.+|+.+|+.|.+.|++|++++++.+.++.+.+.+ ++..+..|-++++.++++=- ...|
T Consensus 3 ~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-----~~~~i~Gd~~~~~~L~~Agi------~~ad 70 (461)
T 4g65_A 3 AMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-----DLRVVNGHASHPDVLHEAGA------QDAD 70 (461)
T ss_dssp CEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-----SCEEEESCTTCHHHHHHHTT------TTCS
T ss_pred cCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-----CcEEEEEcCCCHHHHHhcCC------CcCC
Confidence 356788877 67899999999999999999999988776655443 36778899999988776521 3678
Q ss_pred EEEECCC
Q 022386 92 ILVNAAA 98 (298)
Q Consensus 92 ~li~~ag 98 (298)
.+|-..+
T Consensus 71 ~~ia~t~ 77 (461)
T 4g65_A 71 MLVAVTN 77 (461)
T ss_dssp EEEECCS
T ss_pred EEEEEcC
Confidence 7776554
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=95.62 E-value=0.084 Score=46.40 Aligned_cols=86 Identities=12% Similarity=0.115 Sum_probs=55.5
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHH-----------HHhC-CCCeEEEEccCCCHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA-----------LHSL-GIPAIGLEGDVRKREDA 76 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~-----------~~~~-~~~~~~~~~Dls~~~~~ 76 (298)
+++++++.|.| .|-+|..++..|++.|++|++++|+.++.+++.+. +.+. ..++.++ -+.+. .+
T Consensus 19 Mm~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~--~vp~~-~v 94 (358)
T 4e21_A 19 YFQSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWL--MVPAA-VV 94 (358)
T ss_dssp ---CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEE--CSCGG-GH
T ss_pred hhcCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEE--eCCHH-HH
Confidence 45567888887 68999999999999999999999998766654321 1111 1134333 33333 56
Q ss_pred HHHHHHHHHHhCCccEEEECCC
Q 022386 77 VRVVESTINHFGKLDILVNAAA 98 (298)
Q Consensus 77 ~~~~~~~~~~~~~id~li~~ag 98 (298)
+.+++.+.....+=+++|.+..
T Consensus 95 ~~vl~~l~~~l~~g~iiId~st 116 (358)
T 4e21_A 95 DSMLQRMTPLLAANDIVIDGGN 116 (358)
T ss_dssp HHHHHHHGGGCCTTCEEEECSS
T ss_pred HHHHHHHHhhCCCCCEEEeCCC
Confidence 6667666655445566776654
|
| >3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae} | Back alignment and structure |
|---|
Probab=95.62 E-value=0.022 Score=51.82 Aligned_cols=80 Identities=15% Similarity=0.166 Sum_probs=54.0
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.+++++|.++|.|. |+.|.++|+.|.++|+.|.+.+++........+.+.+.+.++ ...... . ..
T Consensus 4 ~~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~--~~g~~~-~----~~------- 68 (451)
T 3lk7_A 4 ITTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKV--VCGSHP-L----EL------- 68 (451)
T ss_dssp CCTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEE--EESCCC-G----GG-------
T ss_pred hhhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEE--EECCCh-H----Hh-------
Confidence 35688999999999 788999999999999999999987532223345566555433 222111 0 01
Q ss_pred hCC-ccEEEECCCCCC
Q 022386 87 FGK-LDILVNAAAGNF 101 (298)
Q Consensus 87 ~~~-id~li~~ag~~~ 101 (298)
+.. .|.+|.+.|+..
T Consensus 69 ~~~~~d~vv~spgi~~ 84 (451)
T 3lk7_A 69 LDEDFCYMIKNPGIPY 84 (451)
T ss_dssp GGSCEEEEEECTTSCT
T ss_pred hcCCCCEEEECCcCCC
Confidence 123 788888888643
|
| >2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=95.57 E-value=0.074 Score=42.86 Aligned_cols=76 Identities=11% Similarity=0.131 Sum_probs=51.8
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
.+..+++.|.| .|.+|.+++..|++.|++|++++|+.+ .....++.++.+ . ...++.+++++.....
T Consensus 16 ~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~---------~~~~aD~vi~av--~-~~~~~~v~~~l~~~~~ 82 (209)
T 2raf_A 16 YFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ---------ATTLGEIVIMAV--P-YPALAALAKQYATQLK 82 (209)
T ss_dssp ----CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC---------CSSCCSEEEECS--C-HHHHHHHHHHTHHHHT
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH---------HhccCCEEEEcC--C-cHHHHHHHHHHHHhcC
Confidence 46678899998 799999999999999999999999865 112334544433 3 5667788877765544
Q ss_pred CccEEEECCC
Q 022386 89 KLDILVNAAA 98 (298)
Q Consensus 89 ~id~li~~ag 98 (298)
=.++|+.+.
T Consensus 83 -~~~vi~~~~ 91 (209)
T 2raf_A 83 -GKIVVDITN 91 (209)
T ss_dssp -TSEEEECCC
T ss_pred -CCEEEEECC
Confidence 345666554
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* | Back alignment and structure |
|---|
Probab=95.57 E-value=0.013 Score=50.85 Aligned_cols=76 Identities=16% Similarity=0.151 Sum_probs=49.6
Q ss_pred Cc-EEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 12 GK-VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 12 gk-~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
|+ +++|+|++|++|..++..+...|++|++++++.++++... +.+.+.. + |..+.+ ...++++. .+.+
T Consensus 150 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~----~lGa~~v-~--~~~~~~--~~~~~~~~--~~~~ 218 (330)
T 1tt7_A 150 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK----QLGASEV-I--SREDVY--DGTLKALS--KQQW 218 (330)
T ss_dssp GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH----HHTCSEE-E--EHHHHC--SSCCCSSC--CCCE
T ss_pred CCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HcCCcEE-E--ECCCch--HHHHHHhh--cCCc
Confidence 44 8999999999999999998899999999999876654432 2343322 2 221110 01111111 1369
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|++|+++|
T Consensus 219 d~vid~~g 226 (330)
T 1tt7_A 219 QGAVDPVG 226 (330)
T ss_dssp EEEEESCC
T ss_pred cEEEECCc
Confidence 99999997
|
| >1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A* | Back alignment and structure |
|---|
Probab=95.55 E-value=0.02 Score=48.70 Aligned_cols=38 Identities=16% Similarity=0.172 Sum_probs=35.2
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCC
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR 45 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~ 45 (298)
-++.||.++|.|++.-+|+.+++.|...|++|.++.++
T Consensus 161 i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 198 (301)
T 1a4i_A 161 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK 198 (301)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC
Confidence 47899999999999999999999999999999999765
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=95.50 E-value=0.037 Score=47.38 Aligned_cols=85 Identities=8% Similarity=-0.044 Sum_probs=55.1
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHH--------HhCCCCeEEEEccCCCHHHHHHHH---H
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL--------HSLGIPAIGLEGDVRKREDAVRVV---E 81 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~--------~~~~~~~~~~~~Dls~~~~~~~~~---~ 81 (298)
+++.|.| .|.+|..++..|++.|++|++.+|+.+..+.+.+.- .+.-.+.+++..-+.+...++..+ +
T Consensus 8 ~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~~ 86 (303)
T 3g0o_A 8 FHVGIVG-LGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGED 86 (303)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--C
T ss_pred CeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhChh
Confidence 4677775 689999999999999999999999987766654420 000112344444566666676665 4
Q ss_pred HHHHHhCCccEEEECCC
Q 022386 82 STINHFGKLDILVNAAA 98 (298)
Q Consensus 82 ~~~~~~~~id~li~~ag 98 (298)
.+.....+-.++|+...
T Consensus 87 ~l~~~l~~g~ivv~~st 103 (303)
T 3g0o_A 87 GVAHLMKPGSAVMVSST 103 (303)
T ss_dssp CCGGGSCTTCEEEECSC
T ss_pred hHHhhCCCCCEEEecCC
Confidence 44444444455666654
|
| >1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=95.50 E-value=0.34 Score=41.73 Aligned_cols=116 Identities=15% Similarity=0.213 Sum_probs=72.2
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCC--cEEEEcCChhHHHHHHHHHHhCC---CCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
+.+.|+|+ |.+|..++..|+..+. .|++++.+.++++....++.+.. .++.... | + .+.+
T Consensus 6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~-----------~~a~ 70 (318)
T 1ez4_A 6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--E-----------YSDC 70 (318)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--C-----------GGGG
T ss_pred CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--C-----------HHHh
Confidence 58999998 9999999999998886 79999999887777666765532 2233221 2 1 1224
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 160 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~ 160 (298)
...|++|..+|.... + ..+.. +.+..|. -+++.+.+.+.+... .+.+++++.....
T Consensus 71 ~~aDvVii~ag~~~~-~--g~~R~---dl~~~n~----~i~~~i~~~i~~~~p-------~a~iiv~tNPv~~ 126 (318)
T 1ez4_A 71 KDADLVVITAGAPQK-P--GESRL---DLVNKNL----NILSSIVKPVVDSGF-------DGIFLVAANPVDI 126 (318)
T ss_dssp TTCSEEEECCCC----------------CHHHHH----HHHHHHHHHHHHTTC-------CSEEEECSSSHHH
T ss_pred CCCCEEEECCCCCCC-C--CCCHH---HHHHHHH----HHHHHHHHHHHHhCC-------CeEEEEeCCcHHH
Confidence 589999999986321 1 11211 2233333 355555555555431 5788888766543
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* | Back alignment and structure |
|---|
Probab=95.48 E-value=0.021 Score=49.32 Aligned_cols=73 Identities=19% Similarity=0.196 Sum_probs=49.7
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
|+ ++|+|++|++|...+..+...|++|++++++.++.+.+. +.|.+..+ |..+.+. .+++. .+++|
T Consensus 148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~vi---~~~~~~~----~~~~~--~~~~d 213 (324)
T 3nx4_A 148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLK----SLGANRIL---SRDEFAE----SRPLE--KQLWA 213 (324)
T ss_dssp CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH----HHTCSEEE---EGGGSSC----CCSSC--CCCEE
T ss_pred Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----hcCCCEEE---ecCCHHH----HHhhc--CCCcc
Confidence 45 999999999999999999999999999999877655443 23444332 2222111 11111 14799
Q ss_pred EEEECCC
Q 022386 92 ILVNAAA 98 (298)
Q Consensus 92 ~li~~ag 98 (298)
+++.++|
T Consensus 214 ~v~d~~g 220 (324)
T 3nx4_A 214 GAIDTVG 220 (324)
T ss_dssp EEEESSC
T ss_pred EEEECCC
Confidence 9999886
|
| >3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* | Back alignment and structure |
|---|
Probab=95.45 E-value=0.37 Score=41.42 Aligned_cols=117 Identities=12% Similarity=0.102 Sum_probs=70.7
Q ss_pred EEEEecCCchhHHHHHHHHHHc-C--CcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 14 VALLTGGGSGIGFEISLQLGKH-G--AAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~-G--~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.+.|+||+|.+|..++..|..+ + ..+++++.+. ..+...-++.+....+.....--++. .+.+...
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~~~~~~----------~~~~~~a 70 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDA----------TPALEGA 70 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEECSSCC----------HHHHTTC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEecCCCc----------HHHhCCC
Confidence 5889999999999999999876 5 3799999986 44455556665433222221100111 1123479
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccc
Q 022386 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (298)
Q Consensus 91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~ 158 (298)
|++|..||... ++ ..+..+ .++.|..-...+.+.+..+- . .+.+++++...
T Consensus 71 Divii~ag~~r-kp--G~~R~d---ll~~N~~I~~~i~~~i~~~~---p--------~a~vlvvtNPv 121 (312)
T 3hhp_A 71 DVVLISAGVAR-KP--GMDRSD---LFNVNAGIVKNLVQQVAKTC---P--------KACIGIITNPV 121 (312)
T ss_dssp SEEEECCSCSC-CT--TCCHHH---HHHHHHHHHHHHHHHHHHHC---T--------TSEEEECSSCH
T ss_pred CEEEEeCCCCC-CC--CCCHHH---HHHHHHHHHHHHHHHHHHHC---C--------CcEEEEecCcc
Confidence 99999998532 21 234433 45566655555554444431 1 46788887654
|
| >3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} | Back alignment and structure |
|---|
Probab=95.44 E-value=0.21 Score=42.93 Aligned_cols=115 Identities=10% Similarity=0.161 Sum_probs=70.7
Q ss_pred EEEEecCCchhHHHHHHHHHHcCC--cEEEEcCChhHHHHHHHHHHhC----CCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
.+.|+|+ |.+|..++..|+..|. .|++++++.++++....++.+. ..+......|. .+.+
T Consensus 2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~-------------~~a~ 67 (314)
T 3nep_X 2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTND-------------YGPT 67 (314)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESS-------------SGGG
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCC-------------HHHh
Confidence 5788996 9999999999999987 8999999988776655555442 12222221221 1234
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
...|++|..+|.... + ..+. ...++.|. -+++.+.+.+.+.. +.+.+++++....
T Consensus 68 ~~aDvVii~ag~~~k-p--G~~R---~dl~~~N~----~i~~~i~~~i~~~~-------p~a~vivvtNPvd 122 (314)
T 3nep_X 68 EDSDVCIITAGLPRS-P--GMSR---DDLLAKNT----EIVGGVTEQFVEGS-------PDSTIIVVANPLD 122 (314)
T ss_dssp TTCSEEEECCCC----------C---HHHHHHHH----HHHHHHHHHHHTTC-------TTCEEEECCSSHH
T ss_pred CCCCEEEECCCCCCC-C--CCCH---HHHHHhhH----HHHHHHHHHHHHhC-------CCcEEEecCCchh
Confidence 589999999985321 1 1122 23344454 34555556665542 1577888877654
|
| >2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=95.44 E-value=0.27 Score=42.56 Aligned_cols=117 Identities=14% Similarity=0.171 Sum_probs=73.0
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCC--cEEEEcCChhHHHHHHHHHHhCC---CCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.+.+.|+|+ |.+|..++..|+..+. .|++++.+.++++....++.+.. .++.... | + .+.
T Consensus 9 ~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~-----------~~a 73 (326)
T 2zqz_A 9 HQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--E-----------YSD 73 (326)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--C-----------GGG
T ss_pred CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--C-----------HHH
Confidence 368999998 9999999999998886 79999999887777677675532 2233321 2 1 112
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 160 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~ 160 (298)
+...|++|..+|.... + ..+..+ .+..|+. +++.+.+.+.+... .+.+++++.....
T Consensus 74 ~~~aDvVii~ag~~~k-~--g~~R~d---l~~~n~~----i~~~i~~~i~~~~p-------~a~iiv~tNPv~~ 130 (326)
T 2zqz_A 74 AKDADLVVITAGAPQK-P--GETRLD---LVNKNLK----ILKSIVDPIVDSGF-------NGIFLVAANPVDI 130 (326)
T ss_dssp GGGCSEEEECCCCC--------CHHH---HHHHHHH----HHHHHHHHHHHHTC-------CSEEEECSSSHHH
T ss_pred hCCCCEEEEcCCCCCC-C--CCCHHH---HHHHHHH----HHHHHHHHHHHHCC-------CeEEEEeCCcHHH
Confidence 3479999999986321 1 123332 3444444 44444444444321 5778888776543
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=95.31 E-value=0.027 Score=48.96 Aligned_cols=72 Identities=11% Similarity=0.089 Sum_probs=55.9
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
.+.++|.|+ |.+|+.+++.|.++|. |++++++.+..+ .. + ..+.++..|.++++.++++ ...+.|
T Consensus 115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~----~--~~~~~i~gd~~~~~~L~~a------~i~~a~ 179 (336)
T 1lnq_A 115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VL----R--SGANFVHGDPTRVSDLEKA------NVRGAR 179 (336)
T ss_dssp -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HH----H--TTCEEEESCTTSHHHHHHT------CSTTEE
T ss_pred cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HH----h--CCcEEEEeCCCCHHHHHhc------Chhhcc
Confidence 457999996 8999999999999999 999999987655 32 2 2477899999999888765 123678
Q ss_pred EEEECCC
Q 022386 92 ILVNAAA 98 (298)
Q Consensus 92 ~li~~ag 98 (298)
.+|...+
T Consensus 180 ~vi~~~~ 186 (336)
T 1lnq_A 180 AVIVDLE 186 (336)
T ss_dssp EEEECCS
T ss_pred EEEEcCC
Confidence 8887664
|
| >1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=95.23 E-value=0.079 Score=45.77 Aligned_cols=119 Identities=12% Similarity=0.113 Sum_probs=68.5
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCC--cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
.+.+.|+|+ |.+|..++..|+..|. .|++++.+.++++....++.+...-. ..+.++. .. .+.+..
T Consensus 7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~--~~~~i~~-~~--------~~a~~~ 74 (318)
T 1y6j_A 7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFM--GQMSLYA-GD--------YSDVKD 74 (318)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCT--TCEEEC---C--------GGGGTT
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhc--CCeEEEE-CC--------HHHhCC
Confidence 357889998 9999999999999987 89999999776665556665432100 0111221 00 122458
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
.|++|..+|.... + ..+.. +.+..|+.-...+++.+.++ .. .+.+++++....
T Consensus 75 aDvVii~~g~p~k-~--g~~r~---dl~~~n~~i~~~i~~~i~~~---~p--------~a~viv~tNPv~ 127 (318)
T 1y6j_A 75 CDVIVVTAGANRK-P--GETRL---DLAKKNVMIAKEVTQNIMKY---YN--------HGVILVVSNPVD 127 (318)
T ss_dssp CSEEEECCCC---------CHH---HHHHHHHHHHHHHHHHHHHH---CC--------SCEEEECSSSHH
T ss_pred CCEEEEcCCCCCC-C--CcCHH---HHHHhhHHHHHHHHHHHHHh---CC--------CcEEEEecCcHH
Confidence 9999999985321 1 12322 34555655555555555544 12 467777765543
|
| >1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* | Back alignment and structure |
|---|
Probab=95.20 E-value=0.55 Score=40.37 Aligned_cols=74 Identities=15% Similarity=0.216 Sum_probs=51.6
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCC--cEEEEcCChhHHHHHHHHHHhCCC----CeEEEEccCCCHHHHHHHHHHHHH
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGI----PAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~----~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
.+++.|+|+ |.+|..++..|+..|. .|++++++.+.++.....+.+... ++.... | +. +
T Consensus 6 ~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~~-----------~ 70 (316)
T 1ldn_A 6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--DY-----------D 70 (316)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--CG-----------G
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--cH-----------H
Confidence 468999998 9999999999998885 799999997766555555544211 233321 1 11 2
Q ss_pred HhCCccEEEECCCCC
Q 022386 86 HFGKLDILVNAAAGN 100 (298)
Q Consensus 86 ~~~~id~li~~ag~~ 100 (298)
.+...|++|..++..
T Consensus 71 al~~aDvViia~~~~ 85 (316)
T 1ldn_A 71 DCRDADLVVICAGAN 85 (316)
T ss_dssp GTTTCSEEEECCSCC
T ss_pred HhCCCCEEEEcCCCC
Confidence 235799999999864
|
| >3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 | Back alignment and structure |
|---|
Probab=95.20 E-value=0.52 Score=40.77 Aligned_cols=117 Identities=9% Similarity=-0.007 Sum_probs=73.2
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCC--cEEEEcCChhHHHHHHHHHHhC---CCCeEEE-EccCCCHHHHHHHHHHHH
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL---GIPAIGL-EGDVRKREDAVRVVESTI 84 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~---~~~~~~~-~~Dls~~~~~~~~~~~~~ 84 (298)
..+.+.|+|+ |.+|..++..|+..|. .|++++.+.+.++....++.+. ....... ..|..
T Consensus 20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~------------- 85 (330)
T 3ldh_A 20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYS------------- 85 (330)
T ss_dssp CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSC-------------
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHH-------------
Confidence 4578999998 9999999999999997 7999999988777766666543 1111112 12321
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
.+...|++|..+|.... + ..+.. +.+..|.. +.+.+.+.+.+... .+.+++++....
T Consensus 86 -~~~daDiVIitaG~p~k-p--G~tR~---dll~~N~~----I~k~i~~~I~k~~P-------~a~ilvvtNPvd 142 (330)
T 3ldh_A 86 -VSAGSKLVVITAGARQQ-E--GESRL---NLVQRNVN----IFKFIIPNIVKHSP-------DCLKELHPELGT 142 (330)
T ss_dssp -SCSSCSEEEECCSCCCC-S--SCCTT---GGGHHHHH----HHHHHHHHHHHHCT-------TCEEEECSSSHH
T ss_pred -HhCCCCEEEEeCCCCCC-C--CCCHH---HHHHhhHH----HHHHHHHHHHhhCC-------CceEEeCCCccH
Confidence 13478999999996422 1 12222 23334443 34444444444321 577888877654
|
| >2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A* | Back alignment and structure |
|---|
Probab=95.18 E-value=1.2 Score=37.88 Aligned_cols=115 Identities=10% Similarity=0.076 Sum_probs=74.1
Q ss_pred EEEEecCCchhHHHHHHHHHHcCC--cEEEEcCChhHHHHHHHHHHhC----CCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
.+.|+|+ |++|..++..|+.++. ++++++.+.+..+..+.++.+. .........+ |.+ .+
T Consensus 2 KV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~--d~~-----------~~ 67 (294)
T 2x0j_A 2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DYS-----------LL 67 (294)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEES--CGG-----------GG
T ss_pred EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCC--CHH-----------Hh
Confidence 4778895 9999999999998876 6999999987777766667652 2222333221 111 23
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
..-|++|..||... ++ ..+.+++ ++.|.. +++.+.+.+.+... .+.++.+|....
T Consensus 68 ~~aDvVvitAG~pr-kp--GmtR~dL---l~~Na~----I~~~i~~~i~~~~p-------~aivlvvsNPvd 122 (294)
T 2x0j_A 68 KGSEIIVVTAGLAR-KP--GMTRLDL---AHKNAG----IIKDIAKKIVENAP-------ESKILVVTNPMD 122 (294)
T ss_dssp TTCSEEEECCCCCC-CS--SSCHHHH---HHHHHH----HHHHHHHHHHTTST-------TCEEEECSSSHH
T ss_pred CCCCEEEEecCCCC-CC--CCchHHH---HHHHHH----HHHHHHHHHHhcCC-------ceEEEEecCcch
Confidence 47899999999643 21 3455554 455554 55666666665431 467777777653
|
| >3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A | Back alignment and structure |
|---|
Probab=95.14 E-value=0.087 Score=46.57 Aligned_cols=78 Identities=9% Similarity=0.163 Sum_probs=54.8
Q ss_pred CCCCC-CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHH
Q 022386 2 ESPFK-GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVV 80 (298)
Q Consensus 2 ~~~~~-~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~ 80 (298)
|++|+ ...+.+|+++|.|+ |.+|+.+++.+.+.|++|++++.+.... ...+ . -.++..|..|.+.+.+++
T Consensus 1 ~~~~~~~~~~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p---~~~~---a--d~~~~~~~~d~~~l~~~~ 71 (377)
T 3orq_A 1 SNAMNFNKLKFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCP---CRYV---A--HEFIQAKYDDEKALNQLG 71 (377)
T ss_dssp -CCSSCCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCT---TGGG---S--SEEEECCTTCHHHHHHHH
T ss_pred CCccccccCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCCh---hhhh---C--CEEEECCCCCHHHHHHHH
Confidence 34543 44667999999986 5689999999999999999998764311 0011 1 135668999998888877
Q ss_pred HHHHHHhCCccEEEE
Q 022386 81 ESTINHFGKLDILVN 95 (298)
Q Consensus 81 ~~~~~~~~~id~li~ 95 (298)
+. +|+++.
T Consensus 72 ~~-------~dvi~~ 79 (377)
T 3orq_A 72 QK-------CDVITY 79 (377)
T ss_dssp HH-------CSEEEE
T ss_pred Hh-------CCccee
Confidence 53 676643
|
| >3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A* | Back alignment and structure |
|---|
Probab=95.13 E-value=0.11 Score=45.94 Aligned_cols=74 Identities=22% Similarity=0.313 Sum_probs=53.0
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
|+...+.||+++|.|++. +|+.+++.+.+.|++|++++.+.... .....-..+..|..|.+.+.++++
T Consensus 7 m~~~~~~~k~IlIlG~G~-~g~~la~aa~~~G~~vi~~d~~~~~~--------~~~~ad~~~~~~~~d~~~l~~~~~--- 74 (389)
T 3q2o_A 7 MTRIILPGKTIGIIGGGQ-LGRMMALAAKEMGYKIAVLDPTKNSP--------CAQVADIEIVASYDDLKAIQHLAE--- 74 (389)
T ss_dssp CCCCCCTTSEEEEECCSH-HHHHHHHHHHHTTCEEEEEESSTTCT--------TTTTCSEEEECCTTCHHHHHHHHH---
T ss_pred ccccCCCCCEEEEECCCH-HHHHHHHHHHHcCCEEEEEeCCCCCc--------hHHhCCceEecCcCCHHHHHHHHH---
Confidence 555668899999998764 89999999999999999998764310 000011245578888888877775
Q ss_pred HHhCCccEEE
Q 022386 85 NHFGKLDILV 94 (298)
Q Consensus 85 ~~~~~id~li 94 (298)
..|++.
T Consensus 75 ----~~dvI~ 80 (389)
T 3q2o_A 75 ----ISDVVT 80 (389)
T ss_dssp ----TCSEEE
T ss_pred ----hCCEee
Confidence 467663
|
| >4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=95.11 E-value=0.023 Score=46.34 Aligned_cols=44 Identities=16% Similarity=0.172 Sum_probs=37.1
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEE-EcCChhHHHHHHHHH
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAAL 56 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~-~~r~~~~~~~~~~~~ 56 (298)
-+++.|.| +|.+|.+++..|++.|++|++ ++|+.+..+++.+.+
T Consensus 23 mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~ 67 (220)
T 4huj_A 23 MTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRF 67 (220)
T ss_dssp SCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHH
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHh
Confidence 35788998 799999999999999999998 899888777665544
|
| >1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=95.11 E-value=0.041 Score=46.44 Aligned_cols=45 Identities=16% Similarity=0.232 Sum_probs=39.2
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHH
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAAL 56 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~ 56 (298)
.+++++|.| +||.|++++..|++.|+ +|.++.|+.++.+++++.+
T Consensus 118 ~~~~vlvlG-aGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~ 163 (271)
T 1npy_A 118 KNAKVIVHG-SGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY 163 (271)
T ss_dssp TTSCEEEEC-SSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence 568899998 47899999999999998 7999999988888777666
|
| >2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=95.09 E-value=0.15 Score=43.41 Aligned_cols=80 Identities=15% Similarity=0.142 Sum_probs=52.4
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
.+++.|.||.|.+|.+++..|.+.|++|++++|+.+. ...+.+ ...++.++.+-.. .+..+++++.....+=.
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~--~~~~~~--~~aDvVilavp~~---~~~~vl~~l~~~l~~~~ 93 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA--VAESIL--ANADVVIVSVPIN---LTLETIERLKPYLTENM 93 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG--GHHHHH--TTCSEEEECSCGG---GHHHHHHHHGGGCCTTS
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc--CHHHHh--cCCCEEEEeCCHH---HHHHHHHHHHhhcCCCc
Confidence 4579999999999999999999999999999998642 111222 2345666544333 36666666654333323
Q ss_pred EEEECCC
Q 022386 92 ILVNAAA 98 (298)
Q Consensus 92 ~li~~ag 98 (298)
++++.++
T Consensus 94 iv~~~~s 100 (298)
T 2pv7_A 94 LLADLTS 100 (298)
T ss_dssp EEEECCS
T ss_pred EEEECCC
Confidence 5555544
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=95.05 E-value=0.033 Score=45.20 Aligned_cols=39 Identities=10% Similarity=0.108 Sum_probs=33.2
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHH
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRS 51 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~ 51 (298)
.+++.|.| +|.+|.++++.|++.|++|++++|+.+..++
T Consensus 28 ~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~ 66 (215)
T 2vns_A 28 APKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTAR 66 (215)
T ss_dssp -CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHH
T ss_pred CCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 35788998 8999999999999999999999998765443
|
| >3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A | Back alignment and structure |
|---|
Probab=95.00 E-value=0.08 Score=49.44 Aligned_cols=61 Identities=26% Similarity=0.299 Sum_probs=45.2
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCC-------------------hhHHHHHHHHHHhCCCC--eEEE
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR-------------------KTVLRSAVAALHSLGIP--AIGL 66 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~-------------------~~~~~~~~~~~~~~~~~--~~~~ 66 (298)
.|++++|+|.|+ ||+|.++++.|+..|. ++.+++.+ ..+.+.+++.+.+.... +..+
T Consensus 324 kL~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~~ 402 (598)
T 3vh1_A 324 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV 402 (598)
T ss_dssp HHHTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEEE
Confidence 466788999975 6899999999999999 68888654 24677777778775544 4455
Q ss_pred EccC
Q 022386 67 EGDV 70 (298)
Q Consensus 67 ~~Dl 70 (298)
..++
T Consensus 403 ~~~I 406 (598)
T 3vh1_A 403 KLSI 406 (598)
T ss_dssp CCCC
T ss_pred eccc
Confidence 4443
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=94.99 E-value=0.053 Score=46.60 Aligned_cols=89 Identities=12% Similarity=0.013 Sum_probs=56.2
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHH-------HHhCCCCeEEEEccCCCHHHHHHHH-
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA-------LHSLGIPAIGLEGDVRKREDAVRVV- 80 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~Dls~~~~~~~~~- 80 (298)
..+.+++.|.| .|-+|..++..|++.|++|++.+|+.++.+++.+. ..+.-.+.+++..-+.+...++..+
T Consensus 18 ~~~m~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~ 96 (310)
T 3doj_A 18 GSHMMEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVVF 96 (310)
T ss_dssp CCCSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHH
T ss_pred cccCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHHh
Confidence 33346788886 68999999999999999999999998776655421 0000001233444555666677666
Q ss_pred --HHHHHHhCCccEEEECCC
Q 022386 81 --ESTINHFGKLDILVNAAA 98 (298)
Q Consensus 81 --~~~~~~~~~id~li~~ag 98 (298)
+.+.....+-.++|++..
T Consensus 97 ~~~~l~~~l~~g~~vv~~st 116 (310)
T 3doj_A 97 DKGGVLEQICEGKGYIDMST 116 (310)
T ss_dssp STTCGGGGCCTTCEEEECSC
T ss_pred CchhhhhccCCCCEEEECCC
Confidence 444444334455666654
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=94.94 E-value=0.41 Score=41.02 Aligned_cols=72 Identities=14% Similarity=0.161 Sum_probs=51.1
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhC------CCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSL------GIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
+.+.|+|+ |.+|..++..|+..|. +|++++.+.++++....++.+. ..++.+. .| . +
T Consensus 3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t-~d---~-----------~ 66 (309)
T 1ur5_A 3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT-NN---Y-----------A 66 (309)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE-SC---G-----------G
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC-CC---H-----------H
Confidence 57999998 9999999999999997 8999999987776655555442 1222221 12 1 1
Q ss_pred HhCCccEEEECCCCC
Q 022386 86 HFGKLDILVNAAAGN 100 (298)
Q Consensus 86 ~~~~id~li~~ag~~ 100 (298)
.+...|++|..+|..
T Consensus 67 a~~~aD~Vi~a~g~p 81 (309)
T 1ur5_A 67 DTANSDVIVVTSGAP 81 (309)
T ss_dssp GGTTCSEEEECCCC-
T ss_pred HHCCCCEEEEcCCCC
Confidence 234789999999853
|
| >2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=94.88 E-value=0.27 Score=42.01 Aligned_cols=114 Identities=10% Similarity=0.106 Sum_probs=64.6
Q ss_pred EEEEecCCchhHHHHHHHHHHcCC--cEEEEcCChhHHHHHHHHHHhCC---CCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
.+.|+|+ |.+|..++..|+..|. .|++++++.++++....++.+.. ....... .+. +.+.
T Consensus 2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~~-----------~a~~ 66 (304)
T 2v6b_A 2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GGH-----------SELA 66 (304)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---ECG-----------GGGT
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CCH-----------HHhC
Confidence 6889998 9999999999999998 89999999876665555554321 1122211 111 1235
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
..|++|..++.... + ..+. .+.+..|+.-...+.+.+.++ . . .+.+++++....
T Consensus 67 ~aDvVIi~~~~~~~-~--g~~r---~dl~~~n~~i~~~i~~~i~~~-~--p--------~~~vi~~tNP~~ 120 (304)
T 2v6b_A 67 DAQVVILTAGANQK-P--GESR---LDLLEKNADIFRELVPQITRA-A--P--------DAVLLVTSNPVD 120 (304)
T ss_dssp TCSEEEECC------------------CHHHHHHHHHHHHHHHHHH-C--S--------SSEEEECSSSHH
T ss_pred CCCEEEEcCCCCCC-C--CCcH---HHHHHhHHHHHHHHHHHHHHh-C--C--------CeEEEEecCchH
Confidence 78999999975321 1 1111 223445555444444444443 1 1 466666665443
|
| >1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* | Back alignment and structure |
|---|
Probab=94.86 E-value=0.46 Score=41.01 Aligned_cols=72 Identities=11% Similarity=0.123 Sum_probs=51.3
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhC------CCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSL------GIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
+.+.|+|+ |.+|..++..|+..|. +|++++.+.++++.....+.+. ..++... .| . +
T Consensus 5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d---~-----------~ 68 (322)
T 1t2d_A 5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS-NT---Y-----------D 68 (322)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE-CC---G-----------G
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC-CC---H-----------H
Confidence 47889998 9999999999999998 8999999987777655555431 1222221 12 1 1
Q ss_pred HhCCccEEEECCCCC
Q 022386 86 HFGKLDILVNAAAGN 100 (298)
Q Consensus 86 ~~~~id~li~~ag~~ 100 (298)
.+...|++|..+|..
T Consensus 69 al~~aD~Vi~a~g~p 83 (322)
T 1t2d_A 69 DLAGADVVIVTAGFT 83 (322)
T ss_dssp GGTTCSEEEECCSCS
T ss_pred HhCCCCEEEEeCCCC
Confidence 234789999999853
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 298 | ||||
| d2ew8a1 | 247 | c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas | 2e-62 | |
| d1xq1a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara | 5e-60 | |
| d2d1ya1 | 248 | c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T | 2e-58 | |
| d1hxha_ | 253 | c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge | 1e-56 | |
| d1zk4a1 | 251 | c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase | 7e-56 | |
| d1spxa_ | 264 | c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato | 3e-55 | |
| d1xg5a_ | 257 | c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41 | 5e-55 | |
| d1hdca_ | 254 | c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr | 1e-54 | |
| d2ae2a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 2e-54 | |
| d1xkqa_ | 272 | c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh | 3e-54 | |
| d1ydea1 | 250 | c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase | 5e-54 | |
| d1h5qa_ | 260 | c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga | 7e-53 | |
| d1w6ua_ | 294 | c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr | 1e-52 | |
| d1ulsa_ | 242 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 2e-52 | |
| d1vl8a_ | 251 | c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga | 3e-52 | |
| d1yxma1 | 297 | c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re | 3e-52 | |
| d1g0oa_ | 272 | c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase | 3e-52 | |
| d1pr9a_ | 244 | c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie | 8e-52 | |
| d1ja9a_ | 259 | c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc | 1e-51 | |
| d1fmca_ | 255 | c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase | 1e-51 | |
| d2c07a1 | 251 | c.2.1.2 (A:54-304) beta-keto acyl carrier protein | 1e-51 | |
| d1cyda_ | 242 | c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul | 5e-51 | |
| d1ae1a_ | 258 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 1e-50 | |
| d2rhca1 | 257 | c.2.1.2 (A:5-261) beta-keto acyl carrier protein r | 1e-50 | |
| d1geea_ | 261 | c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat | 3e-50 | |
| d2bgka1 | 268 | c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de | 6e-50 | |
| d1xhla_ | 274 | c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh | 8e-50 | |
| d1gz6a_ | 302 | c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do | 1e-47 | |
| d2gdza1 | 254 | c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog | 1e-46 | |
| d1nffa_ | 244 | c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob | 2e-46 | |
| d1iy8a_ | 258 | c.2.1.2 (A:) Levodione reductase {Corynebacterium | 3e-46 | |
| d1bdba_ | 276 | c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy | 1e-45 | |
| d2a4ka1 | 241 | c.2.1.2 (A:2-242) beta-keto acyl carrier protein r | 4e-45 | |
| d1k2wa_ | 256 | c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s | 5e-45 | |
| d1zema1 | 260 | c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba | 6e-45 | |
| d1o5ia_ | 234 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 2e-44 | |
| d2ag5a1 | 245 | c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami | 3e-44 | |
| d1zmta1 | 252 | c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag | 3e-44 | |
| d1q7ba_ | 243 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 7e-44 | |
| d1x1ta1 | 260 | c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge | 3e-43 | |
| d1uzma1 | 237 | c.2.1.2 (A:9-245) beta-keto acyl carrier protein r | 5e-43 | |
| d1gega_ | 255 | c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl | 8e-43 | |
| d1yb1a_ | 244 | c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase | 1e-42 | |
| d1sbya1 | 254 | c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase | 5e-42 | |
| d1edoa_ | 244 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 6e-41 | |
| d1xu9a_ | 269 | c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase | 8e-41 | |
| d2bd0a1 | 240 | c.2.1.2 (A:2-241) Bacterial sepiapterin reductase | 3e-39 | |
| d1mxha_ | 266 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 1e-38 | |
| d1oaaa_ | 259 | c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus | 1e-38 | |
| d1ulua_ | 256 | c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph | 1e-38 | |
| d1uaya_ | 241 | c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena | 2e-37 | |
| d1wmaa1 | 275 | c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox | 2e-34 | |
| d1dhra_ | 236 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 7e-34 | |
| d1qsga_ | 258 | c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli | 1e-33 | |
| d2o23a1 | 248 | c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr | 3e-32 | |
| d2pd4a1 | 274 | c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte | 2e-31 | |
| d1e7wa_ | 284 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 8e-30 | |
| d1ooea_ | 235 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 2e-28 | |
| d1fjha_ | 257 | c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase | 2e-26 | |
| d1yo6a1 | 250 | c.2.1.2 (A:1-250) Putative carbonyl reductase snif | 4e-26 | |
| d1jtva_ | 285 | c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi | 5e-23 | |
| d2h7ma1 | 268 | c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri | 1e-21 | |
| d1d7oa_ | 297 | c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B | 4e-20 | |
| d1snya_ | 248 | c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly | 7e-18 | |
| d1uh5a_ | 329 | c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite | 5e-17 | |
| d2fr1a1 | 259 | c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI | 6e-12 | |
| d1jaya_ | 212 | c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase | 2e-11 | |
| d1luaa1 | 191 | c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter | 2e-10 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 2e-04 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 0.001 | |
| d1udca_ | 338 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 0.002 | |
| d1rpna_ | 321 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo | 0.004 |
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Score = 195 bits (497), Expect = 2e-62
Identities = 80/253 (31%), Positives = 122/253 (48%), Gaps = 13/253 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LK K+A++TGG +GIG I+ + GA IAI A AA+ +LG + ++ D
Sbjct: 3 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVP--APEAEAAIRNLGRRVLTVKCD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + D + I+ FG+ DILVN A L+P ++L+ ++ EI+ F+M
Sbjct: 61 VSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAK 120
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ +K+ G G IIN+++T ++ H + KAA TR+LA + G
Sbjct: 121 AFVPGMKRNG--------WGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLG- 171
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-FGEKWDIAMAALYLASDAG 248
I VN IAP + TA A + + + A D+ AA +LASD
Sbjct: 172 KDGITVNAIAPSLV-RTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDA 230
Query: 249 KYVNGNTLIVDGG 261
++ G TL VDGG
Sbjct: 231 SFITGQTLAVDGG 243
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 189 bits (482), Expect = 5e-60
Identities = 70/264 (26%), Positives = 108/264 (40%), Gaps = 11/264 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LK K L+TGG GIG I + GA I R + L ++ G G D
Sbjct: 6 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCD 65
Query: 70 VRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
R + +++++ + F GKLDIL+N P D + F I + + +
Sbjct: 66 ASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLS 125
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
A LK G G II +S+ + SA K A++ + R+LA EW
Sbjct: 126 QLAHPLLKASGC--------GNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWA 177
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
IR N +AP I T + +E + +FGE +++ +L A
Sbjct: 178 -SDGIRANAVAPAVI-ATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAA 235
Query: 249 KYVNGNTLIVDGGNWLSNPRDLPK 272
Y+ G T+ VDGG ++ P+
Sbjct: 236 SYITGQTICVDGGLTVNGFSYQPQ 259
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Score = 185 bits (472), Expect = 2e-58
Identities = 75/257 (29%), Positives = 115/257 (44%), Gaps = 19/257 (7%)
Query: 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEG 68
+ GK L+TGG GIG I+ + GA +A+ R A A I +
Sbjct: 2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEA------IGGAFFQV 55
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
D+ + VR VE G++D+LVN AA A + +R V+E++ +
Sbjct: 56 DLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLS 115
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
A + ++K G G I+N+++ A +A+K + ++TRSLAL+
Sbjct: 116 ALAAREMRKVGGGA--------IVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLA 167
Query: 189 TDYAIRVNGIAPGPIK----DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
IRVN +APG I A PE R D A + G+ ++A A L+LA
Sbjct: 168 -PLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLA 226
Query: 245 SDAGKYVNGNTLIVDGG 261
S+ ++ G L VDGG
Sbjct: 227 SEKASFITGAILPVDGG 243
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 180 bits (459), Expect = 1e-56
Identities = 73/257 (28%), Positives = 114/257 (44%), Gaps = 18/257 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+GKVAL+TGG SG+G E+ L GA +A + + A L G ++ + D
Sbjct: 4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V D V+ + G L++LVN A E F +++I++ FI C
Sbjct: 61 VSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQ 120
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ + +K+ +GG IIN+++ + SA+KAAV ++TR+ AL
Sbjct: 121 QGIAAMKE---------TGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRK 171
Query: 190 D-YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK----FGEKWDIAMAALYLA 244
YAIRVN I P I T + P+ + + + IA L+LA
Sbjct: 172 QGYAIRVNSIHPDGI-YTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLA 230
Query: 245 SDAGKYVNGNTLIVDGG 261
SD ++G+ L D
Sbjct: 231 SDESSVMSGSELHADNS 247
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Score = 179 bits (454), Expect = 7e-56
Identities = 72/253 (28%), Positives = 114/253 (45%), Gaps = 10/253 (3%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GKVA++TGG GIG I+ + + GA + I GR V A ++ + + D
Sbjct: 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD-QIQFFQHD 62
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ ++ ++T FG + LVN A E+ + +R ++ ++ G F
Sbjct: 63 SSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTR 122
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
++ +K G G IIN+S+ + +A+K AV +++S AL+
Sbjct: 123 LGIQRMKNKGL-------GASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCAL 175
Query: 190 -DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
DY +RVN + PG I T V L E GE DIA +YLAS+
Sbjct: 176 KDYDVRVNTVHPGYI-KTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNES 234
Query: 249 KYVNGNTLIVDGG 261
K+ G+ +VDGG
Sbjct: 235 KFATGSEFVVDGG 247
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 177 bits (451), Expect = 3e-55
Identities = 73/267 (27%), Positives = 112/267 (41%), Gaps = 24/267 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP---AIGL 66
KVA++TG +GIG ++ + GA + I GR L + + G+ +
Sbjct: 3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSV 62
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAA----GNFLVPAEDLSPNGFRTVIEIDSV 122
DV ++ +T+ FGKLDILVN A + S + + ++
Sbjct: 63 VADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLR 122
Query: 123 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 182
+ +A+ +L G I+ S AT + S AKAA+D TR+
Sbjct: 123 SVIALTKKAVPHLSSTK--------GEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRN 174
Query: 183 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-------FGEKWD 235
A++ + IRVN I+PG + G + PEE K MA K G+ D
Sbjct: 175 TAIDLI-QHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQD 233
Query: 236 IAMAALYLAS-DAGKYVNGNTLIVDGG 261
IA +LA Y+ G+ L+VDGG
Sbjct: 234 IAEVIAFLADRKTSSYIIGHQLVVDGG 260
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Score = 177 bits (449), Expect = 5e-55
Identities = 59/257 (22%), Positives = 102/257 (39%), Gaps = 13/257 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP--AIGLE 67
+ ++AL+TG GIG ++ L + G + R + A S G P I
Sbjct: 8 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYR 67
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
D+ ED + + + + +DI +N A S +G++ + ++ + I
Sbjct: 68 CDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSIC 127
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV--SAAKAAVDSITRSLAL 185
EA + +K+ G IINI++ + + SA K AV ++T L
Sbjct: 128 TREAYQSMKERNVD------DGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQ 181
Query: 186 EWGT-DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
E IR I+PG + +T KL ++ KA K + D+A A +Y+
Sbjct: 182 ELREAQTHIRATCISPGVV-ETQFAFKL-HDKDPEKAAATYEQMKCLKPEDVAEAVIYVL 239
Query: 245 SDAGKYVNGNTLIVDGG 261
S G+ + G
Sbjct: 240 STPAHIQIGDIQMRPTG 256
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Score = 175 bits (446), Expect = 1e-54
Identities = 79/258 (30%), Positives = 108/258 (41%), Gaps = 14/258 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GK ++TGG G+G E + Q GA + + + L G A D
Sbjct: 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLD 59
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V ED RVV FG +D LVN A + + E S FR V+EI+ G FI
Sbjct: 60 VTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMK 119
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ +K G GG I+NIS+ A+K V +++ A+E GT
Sbjct: 120 TVIPAMKDAG--------GGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGT 171
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK 249
D IRVN + PG T ++ + + E +IA A + L SD
Sbjct: 172 DR-IRVNSVHPGMT-YTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSS 229
Query: 250 YVNGNTLIVDGGNWLSNP 267
YV G L VDGG W + P
Sbjct: 230 YVTGAELAVDGG-WTTGP 246
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Score = 175 bits (445), Expect = 2e-54
Identities = 76/263 (28%), Positives = 119/263 (45%), Gaps = 16/263 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+G AL+TGG GIG+ I +L GA++ R + L + S G D
Sbjct: 6 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCD 65
Query: 70 VRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
+ R + ++ + NHF GKL+ILVN A A+D + + ++ I+ + +
Sbjct: 66 LSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLS 125
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
A +LK RG ++ IS+ A Y+ A K A+D +TR LA EW
Sbjct: 126 VLAHPFLKASERGN--------VVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWA 177
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY----KFGEKWDIAMAALYLA 244
IRVNG+ PG I T+ V + + + + + + GE ++A +L
Sbjct: 178 -KDNIRVNGVGPGVI-ATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLC 235
Query: 245 SDAGKYVNGNTLIVDGGNWLSNP 267
A YV G + VDGG ++N
Sbjct: 236 FPAASYVTGQIIYVDGG-LMANC 257
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Score = 175 bits (445), Expect = 3e-54
Identities = 65/270 (24%), Positives = 116/270 (42%), Gaps = 24/270 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIP---AIGL 66
K ++TG +GIG ++ + GA + I GR L + G+ +
Sbjct: 3 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV 62
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAA----GNFLVPAEDLSPNGFRTVIEIDSV 122
DV + +++ ST+ FGK+D+LVN A F D + + ++++
Sbjct: 63 VADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQ 122
Query: 123 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRS 182
M + +L G I+ S A ++ + AKAA+D TRS
Sbjct: 123 AVIEMTKKVKPHLVASK--------GEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRS 174
Query: 183 LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-------FGEKWD 235
A++ + IRVN ++PG ++ + P++ K ++MA++K G+
Sbjct: 175 TAIDLA-KFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEH 233
Query: 236 IAMAALYLAS-DAGKYVNGNTLIVDGGNWL 264
IA L+LA + Y+ G +++ DGG L
Sbjct: 234 IANIILFLADRNLSFYILGQSIVADGGTSL 263
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Score = 174 bits (442), Expect = 5e-54
Identities = 82/264 (31%), Positives = 128/264 (48%), Gaps = 22/264 (8%)
Query: 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGL 66
G GKV ++TGGG GIG I GA + I + ++ R+ L A+ +
Sbjct: 1 GTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG----AVFI 56
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTF 125
DV + +D +V TI FG+LD +VN A + E+ S GFR ++E++ +GT+
Sbjct: 57 LCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTY 116
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
+ AL YL+K G +INIS+ + + A K AV ++T++LAL
Sbjct: 117 TLTKLALPYLRKS---------QGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALAL 167
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYMAAYKFGEKWDIAMAA 240
+ Y +RVN I+PG I T +LA P + + G+ ++ AA
Sbjct: 168 DES-PYGVRVNCISPGNI-WTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAA 225
Query: 241 LYLASDAGKYVNGNTLIVDGGNWL 264
++LAS+A + G L+V GG L
Sbjct: 226 VFLASEAN-FCTGIELLVTGGAEL 248
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Score = 171 bits (435), Expect = 7e-53
Identities = 54/253 (21%), Positives = 106/253 (41%), Gaps = 4/253 (1%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-HSLGIPAIGLEG 68
K ++TGG GIG + + GA +A++ R + G+ +
Sbjct: 7 FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQC 66
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV + + ++ G + L+ A + + PA +L+ F V +++ G F C
Sbjct: 67 DVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTC 126
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
K + + + + + I + Q+ +++KAA ++ + LA EW
Sbjct: 127 RAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWA 186
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
IRVN ++PG + +T + + ++IR + +F + ++ A+ L SD
Sbjct: 187 -SAGIRVNALSPGYV-NTDQTAHM-DKKIRDHQASNIPLNRFAQPEEMTGQAILLLSDHA 243
Query: 249 KYVNGNTLIVDGG 261
Y+ G +DGG
Sbjct: 244 TYMTGGEYFIDGG 256
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Score = 172 bits (436), Expect = 1e-52
Identities = 87/281 (30%), Positives = 137/281 (48%), Gaps = 19/281 (6%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-L 59
M P +GKVA +TGGG+G+G ++ L GA I R+ VL++ + S
Sbjct: 17 MLPPNS---FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT 73
Query: 60 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 119
G ++ DVR + V I G +I++N AAGNF+ P E LSPN ++T+ +I
Sbjct: 74 GNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDI 133
Query: 120 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSI 179
GT + E K L K + G ++I+ T + + + ++AKA V+++
Sbjct: 134 VLNGTAFVTLEIGKQLIKAQK-------GAAFLSITTIYAETGSGFVVPSASAKAGVEAM 186
Query: 180 TRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDIAM 238
++SLA EWG Y +R N I PGPIK S+L P + + + G ++A
Sbjct: 187 SKSLAAEWG-KYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELAN 245
Query: 239 AALYLASDAGKYVNGNTLIVDGG------NWLSNPRDLPKE 273
A +L SD ++NG + DGG ++ R + KE
Sbjct: 246 LAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTKE 286
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Score = 169 bits (430), Expect = 2e-52
Identities = 73/252 (28%), Positives = 116/252 (46%), Gaps = 17/252 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LK K L+TG GIG K GA + + LR A A + A + D
Sbjct: 3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEA-----VGAHPVVMD 57
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V R + H G+LD +V+ A + + V+ ++ G+F++
Sbjct: 58 VADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAK 117
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
A + +++ I ++A+ Y Q + +A+ A V +TR+LALE G
Sbjct: 118 AASEAMRE---------KNPGSIVLTASRVYLGNLGQANYAASMAGVVGLTRTLALELG- 167
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK 249
+ IRVN +APG I +T +K+ PE++R KA + G+ ++A AAL+L SD
Sbjct: 168 RWGIRVNTLAPGFI-ETRMTAKV-PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESS 225
Query: 250 YVNGNTLIVDGG 261
++ G L VDGG
Sbjct: 226 FITGQVLFVDGG 237
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Score = 169 bits (430), Expect = 3e-52
Identities = 86/258 (33%), Positives = 127/258 (49%), Gaps = 10/258 (3%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-HSLGIPAIGLEG 68
L+G+VAL+TGG G+GF I+ L + G ++ + R A L G+ +
Sbjct: 3 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC 62
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV E+ +++E+ FGKLD +VNAA N PAE+ + FR VIE++ GT+ +C
Sbjct: 63 DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVC 122
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
EA S + II S T+ +A+K V S+T++LA EWG
Sbjct: 123 REAFSL-------LRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWG 175
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
Y IRVN IAPG + + + E + + G D+ A++LAS+
Sbjct: 176 -RYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEA 234
Query: 249 KYVNGNTLIVDGGNWLSN 266
KYV G + VDGG W +N
Sbjct: 235 KYVTGQIIFVDGG-WTAN 251
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 171 bits (434), Expect = 3e-52
Identities = 81/273 (29%), Positives = 128/273 (46%), Gaps = 17/273 (6%)
Query: 2 ESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL----- 56
S +L+G+VA++TGG +GIG I +L + G+ + I R+ L+SA L
Sbjct: 2 RSYLAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLP 61
Query: 57 HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV 116
+ I ++ ++R E+ +V+ST++ FGK++ LVN G FL PAE +S G+ V
Sbjct: 62 PTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAV 121
Query: 117 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAV 176
+E + GTF MC K G I +H AA+A V
Sbjct: 122 LETNLTGTFYMCKAVYSSWMKEHGGS---------IVNIIVPTKAGFPLAVHSGAARAGV 172
Query: 177 DSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDYMAAYKFGEKW 234
++T+SLALEW IR+N +APG I V + + + A + G
Sbjct: 173 YNLTKSLALEWA-CSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPE 231
Query: 235 DIAMAALYLASDAGKYVNGNTLIVDGGNWLSNP 267
+++ +L S A ++ G ++ VDGG L
Sbjct: 232 EVSSVVCFLLSPAASFITGQSVDVDGGRSLYTH 264
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 170 bits (432), Expect = 3e-52
Identities = 81/268 (30%), Positives = 124/268 (46%), Gaps = 24/268 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEG 68
L+GKVAL+TG G GIG E++++LG+ G + + T VAA+ G A ++
Sbjct: 16 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKA 75
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
+V ED VR+ E + FGKLDI+ + + +D++P F V I++ G F +
Sbjct: 76 NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVA 135
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
EA K+L+ GGR S G A S +K A+++ R +A++
Sbjct: 136 REAYKHLEIGGRLILMGSITG---------QAKAVPKHAVYSGSKGAIETFARCMAIDMA 186
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEI------------RSKATDYMAAYKFGEKWDI 236
D I VN +APG I T + E I A + + G DI
Sbjct: 187 -DKKITVNVVAPGGI-KTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDI 244
Query: 237 AMAALYLASDAGKYVNGNTLIVDGGNWL 264
A +LAS+ G +V G + +DGG +
Sbjct: 245 ARVVCFLASNDGGWVTGKVIGIDGGACM 272
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 168 bits (426), Expect = 8e-52
Identities = 65/254 (25%), Positives = 102/254 (40%), Gaps = 16/254 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L G+ L+TG G GIG L GA + + R + L S V + D
Sbjct: 5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG----IEPVCVD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ E E + G +D+LVN AA L P +++ F E++ +
Sbjct: 61 LGDWEA----TERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQ 116
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ L G I+N+S+ A + K A+D +T+ +ALE G
Sbjct: 117 IVARGLIARGVPG-------AIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELG- 168
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK 249
+ IRVN + P + + G + + + + KF E + A L+L SD
Sbjct: 169 PHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSG 228
Query: 250 YVNGNTLIVDGGNW 263
G+TL V+GG W
Sbjct: 229 MTTGSTLPVEGGFW 242
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 168 bits (427), Expect = 1e-51
Identities = 68/265 (25%), Positives = 121/265 (45%), Gaps = 22/265 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEG 68
L GKVAL TG G GIG I+++LG+ GA++ + + VA L LG + ++
Sbjct: 4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQA 63
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
D+ K + V + + ++HFG LD +++ + +++ F V +++ G F +
Sbjct: 64 DISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVA 123
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
+ LK+ ++GGR +SS ++ T + +KAAV+ R+ A++ G
Sbjct: 124 QQGLKHCRRGGRIILTSSIAAVM---------TGIPNHALYAGSKAAVEGFCRAFAVDCG 174
Query: 189 TDYAIRVNGIAPGPIK-----------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIA 237
+ VN IAPG +K G + E+I + + G DI
Sbjct: 175 -AKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIG 233
Query: 238 MAALYLASDAGKYVNGNTLIVDGGN 262
A L + +++NG + + GG
Sbjct: 234 RAVSALCQEESEWINGQVIKLTGGG 258
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Score = 168 bits (427), Expect = 1e-51
Identities = 76/253 (30%), Positives = 119/253 (47%), Gaps = 11/253 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GK A++TG G+GIG EI++ GA++ + V + LG A D
Sbjct: 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCD 68
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ ++ + + I+ GK+DILVN A G P D+ FR E++ F +
Sbjct: 69 ITSEQELSALADFAISKLGKVDILVNNAGGGGPKP-FDMPMADFRRAYELNVFSFFHLSQ 127
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
++K + GG+I+ I++ +++KAA + R++A + G
Sbjct: 128 LVAPEMEK--------NGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLG- 178
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK 249
+ IRVNGIAPG I T + + EI K + + G+ DIA AAL+L S A
Sbjct: 179 EKNIRVNGIAPGAI-LTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAAS 237
Query: 250 YVNGNTLIVDGGN 262
+V+G L V GG
Sbjct: 238 WVSGQILTVSGGG 250
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Score = 168 bits (426), Expect = 1e-51
Identities = 75/252 (29%), Positives = 113/252 (44%), Gaps = 11/252 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+ KVAL+TG G GIG EI+ L K + + + R + S V + S G + G GD
Sbjct: 8 GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGD 67
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V K+E+ V+ + +DILVN A + + + V+ + F +
Sbjct: 68 VSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQ 127
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
K + G IINIS+ + T Q + S++KA V T+SLA E
Sbjct: 128 PISKRMINNR--------YGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELA- 178
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK 249
I VN IAPG I E+I+ + A + G ++A A +L+SD
Sbjct: 179 SRNITVNAIAPGFISSDMTDKI--SEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSG 236
Query: 250 YVNGNTLIVDGG 261
Y+NG ++DGG
Sbjct: 237 YINGRVFVIDGG 248
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 166 bits (421), Expect = 5e-51
Identities = 60/252 (23%), Positives = 102/252 (40%), Gaps = 16/252 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
G AL+TG G GIG + L GA + + R + L S + D
Sbjct: 3 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG----IEPVCVD 58
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+ + E + G +D+LVN AA + P +++ F ++ F +
Sbjct: 59 LGDWDA----TEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQ 114
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ + G I+N+S+ + + I S+ K A+ +T+++A+E G
Sbjct: 115 MVARDMIN-------RGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELG- 166
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK 249
+ IRVN + P + G A E K + KF E D+ + L+L SD
Sbjct: 167 PHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSA 226
Query: 250 YVNGNTLIVDGG 261
+G ++VD G
Sbjct: 227 STSGGGILVDAG 238
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Score = 166 bits (420), Expect = 1e-50
Identities = 68/257 (26%), Positives = 113/257 (43%), Gaps = 14/257 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LKG AL+TGG GIG+ I +L GA + R + L + G+ G D
Sbjct: 4 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCD 63
Query: 70 VRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
+ R + +++++ + F GKL+ILVN A A+D + + ++ + + +
Sbjct: 64 LLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLS 123
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
A LK G +I +S+ ++A SA+K A++ +T+SLA EW
Sbjct: 124 QIAYPLLKASQNGN--------VIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWA 175
Query: 189 TDYAIRVNGIAPGPIK----DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244
IRVN +APG I +TA +E + G+ +++ +L
Sbjct: 176 -KDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLC 234
Query: 245 SDAGKYVNGNTLIVDGG 261
A Y+ G + DGG
Sbjct: 235 FPAASYITGQIIWADGG 251
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Score = 165 bits (419), Expect = 1e-50
Identities = 70/259 (27%), Positives = 116/259 (44%), Gaps = 16/259 (6%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
+VAL+TG SGIG EI+ +LGK G + + R + LR+ + L G+ A G DVR
Sbjct: 2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVR 61
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
+ +V + + +G +D+LVN A +L+ + V+E + G F + +
Sbjct: 62 SVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQV 121
Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
LK RG G I+NI++T + SA+K V T++L LE
Sbjct: 122 LKAGGMLERGT------GRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELA-RT 174
Query: 192 AIRVNGIAPGPIK---------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242
I VN + PG ++ + + +++ EE + T + ++ + ++A Y
Sbjct: 175 GITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAY 234
Query: 243 LASDAGKYVNGNTLIVDGG 261
L V L V GG
Sbjct: 235 LIGPGAAAVTAQALNVCGG 253
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Score = 164 bits (417), Expect = 3e-50
Identities = 79/253 (31%), Positives = 125/253 (49%), Gaps = 9/253 (3%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHSLGIPAIGLEG 68
L+GKV ++TG +G+G ++++ A + + R K S + + +G AI ++G
Sbjct: 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV D + +V+S I FGKLD+++N A V + ++S + + VI+ + G F+
Sbjct: 65 DVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGS 124
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
EA+KY + G +IN+S+ +H +A+K + +T +LALE+
Sbjct: 125 REAIKY-------FVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYA 177
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
IRVN I PG I K A E R+ + GE +IA A +LAS
Sbjct: 178 -PKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEA 236
Query: 249 KYVNGNTLIVDGG 261
YV G TL DGG
Sbjct: 237 SYVTGITLFADGG 249
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Score = 164 bits (416), Expect = 6e-50
Identities = 72/263 (27%), Positives = 113/263 (42%), Gaps = 14/263 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+ KVA++TGG GIG + ++GA + I + + S + + D
Sbjct: 4 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDV-ISFVHCD 62
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP--AEDLSPNGFRTVIEIDSVGTFIM 127
V K ED +V++TI GKLDI+ P + F+ V++I+ G F++
Sbjct: 63 VTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLV 122
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
A + + + G I+ S + +A K AV +T SL E
Sbjct: 123 AKHAARVMIPAKK-------GSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTEL 175
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY---KFGEKWDIAMAALYLA 244
G +Y IRVN ++P + + R + + AA D+A A YLA
Sbjct: 176 G-EYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLA 234
Query: 245 SDAGKYVNGNTLIVDGGNWLSNP 267
D KYV+G L++DGG +NP
Sbjct: 235 GDESKYVSGLNLVIDGGYTRTNP 257
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Score = 164 bits (415), Expect = 8e-50
Identities = 65/268 (24%), Positives = 114/268 (42%), Gaps = 22/268 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPA---IGL 66
GK ++TG +GIG ++ K GA + I GR + L + G+PA +
Sbjct: 2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAV 61
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL--VPAEDLSPNGFRTVIEIDSVGT 124
DV + ++ +T+ FGK+DILVN A N D ++ +++
Sbjct: 62 VADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAV 121
Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
M + ++L K I+ S A + + AKAA+D TR A
Sbjct: 122 IEMTQKTKEHLIKTKG--------EIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTA 173
Query: 185 LEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-------FGEKWDIA 237
++ + +RVN ++PG + + PE K ++ + K G+ +IA
Sbjct: 174 IDLI-QHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIA 232
Query: 238 MAALYLAS-DAGKYVNGNTLIVDGGNWL 264
++LA + Y+ G +++ DGG+ L
Sbjct: 233 NIIVFLADRNLSSYIIGQSIVADGGSTL 260
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 159 bits (403), Expect = 1e-47
Identities = 56/268 (20%), Positives = 105/268 (39%), Gaps = 37/268 (13%)
Query: 3 SPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAI---------MGRRKTVLRSAV 53
SP + G+V L+TG G G+G +L + GA + + +G+ + V
Sbjct: 1 SPLR---FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVV 57
Query: 54 AALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGF 113
+ G A+ V E ++V++ ++ FG++D++VN A +S +
Sbjct: 58 EEIRRRGGKAVANYDSV---EAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDW 114
Query: 114 RTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAK 173
+ + G+F + A ++KK G II ++ + Q + SAAK
Sbjct: 115 DIIQRVHLRGSFQVTRAAWDHMKKQN--------YGRIIMTASASGIYGNFGQANYSAAK 166
Query: 174 AAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEK 233
+ + +L +E I N IAP + + PE++ + +
Sbjct: 167 LGLLGLANTLVIEGR-KNNIHCNTIAPNAG--SRMTETVMPEDLV----------EALKP 213
Query: 234 WDIAMAALYLASDAGKYVNGNTLIVDGG 261
+A L+L ++ NG V G
Sbjct: 214 EYVAPLVLWLCHESC-EENGGLFEVGAG 240
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Score = 155 bits (393), Expect = 1e-46
Identities = 68/262 (25%), Positives = 108/262 (41%), Gaps = 28/262 (10%)
Query: 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEG 68
GKVAL+TG GIG + L GA +A++ AALH + ++
Sbjct: 2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQC 61
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
DV ++ ++HFG+LDILVN A N + + ++I+ V
Sbjct: 62 DVADQQQLRDTFRKVVDHFGRLDILVNNAGVN--------NEKNWEKTLQINLVSVISGT 113
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITR--SLALE 186
+ L Y+ K G+ GGIIIN+S+ Q A+K + TR +LA
Sbjct: 114 YLGLDYMSKQNGGE-----GGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAAN 168
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-------FGEKWDIAMA 239
+ +R+N I PG + +TA + + EE + +Y K + IA
Sbjct: 169 LM-NSGVRLNAICPGFV-NTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANG 226
Query: 240 ALYLASDAGKYVNGNTLIVDGG 261
+ L D +NG + +
Sbjct: 227 LITLIEDD--ALNGAIMKITTS 246
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 154 bits (390), Expect = 2e-46
Identities = 71/252 (28%), Positives = 112/252 (44%), Gaps = 19/252 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GKVAL++GG G+G + GA + ++ A L A + D
Sbjct: 4 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAE---LADAARYVHLD 60
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + V++ + FG L +LVN A + ED + ++ +++++ G F+
Sbjct: 61 VTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIR 120
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+K +K+ GRG IINIS+ T +A K AV +T+S ALE G
Sbjct: 121 AVVKPMKEAGRGS--------IINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELG- 171
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK 249
IRVN I PG + T + + ++ A + E +++ +YLASD
Sbjct: 172 PSGIRVNSIHPGLV-KTPMTDWVPEDIFQT------ALGRAAEPVEVSNLVVYLASDESS 224
Query: 250 YVNGNTLIVDGG 261
Y G +VDGG
Sbjct: 225 YSTGAEFVVDGG 236
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Score = 154 bits (390), Expect = 3e-46
Identities = 68/261 (26%), Positives = 114/261 (43%), Gaps = 18/261 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLE 67
+V L+TGGGSG+G +++L GA ++++ L ++ AA+ +
Sbjct: 2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTV 61
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV-PAEDLSPNGFRTVIEIDSVGTFI 126
DV V +T FG++D N A P E + F V+ I+ G F+
Sbjct: 62 ADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFL 121
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
+ LK +++ G+++N ++ Q +AAK V +TR+ A+E
Sbjct: 122 GLEKVLKIMRE--------QGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVE 173
Query: 187 WGTDYAIRVNGIAPGPIK------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
+G Y IR+N IAPG I + P + + + ++GE +IA
Sbjct: 174 YG-RYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVV 232
Query: 241 LYLASDAGKYVNGNTLIVDGG 261
+L SD YVN + +DGG
Sbjct: 233 AFLLSDDASYVNATVVPIDGG 253
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Score = 153 bits (388), Expect = 1e-45
Identities = 64/266 (24%), Positives = 95/266 (35%), Gaps = 28/266 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
LKG+ L+TGG SG+G + + GA +A++ + L G +G+ GD
Sbjct: 3 LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETD---HGDNVLGIVGD 59
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSP-----NGFRTVIEIDSVGT 124
VR ED + + FGK+D L+ A A P F V I+ G
Sbjct: 60 VRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGY 119
Query: 125 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 184
L L G +I IS Y +AAK A+ + R LA
Sbjct: 120 IHAVKACLPALVASR--------GNVIFTISNAGFY-PNGGGPLYTAAKHAIVGLVRELA 170
Query: 185 LEWGTDYAIRVNGIAPGPIK--------DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236
E +RVNG+ G I G ++ + + + E +
Sbjct: 171 FELAPY--VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEY 228
Query: 237 AMAALYLASDA-GKYVNGNTLIVDGG 261
A ++ A+ G L DGG
Sbjct: 229 TGAYVFFATRGDAAPATGALLNYDGG 254
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Score = 151 bits (381), Expect = 4e-45
Identities = 70/252 (27%), Positives = 112/252 (44%), Gaps = 17/252 (6%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GK L+TG SGIG + GA++ + R + +L AVAA L AI + D
Sbjct: 3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAA---LEAEAIAVVAD 59
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + V + FG+L + + A + +L + V+ ++ G+F++
Sbjct: 60 VSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVAR 119
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+A + L++GG + S G+ + H +A K V + R+LALE
Sbjct: 120 KAGEVLEEGGSLVLTGSVAGLGA-----------FGLAHYAAGKLGVVGLARTLALELA- 167
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK 249
+RVN + PG I T + L P + + G ++A AAL+L S+
Sbjct: 168 RKGVRVNVLLPGLI-QTPMTAGLPPWA-WEQEVGASPLGRAGRPEEVAQAALFLLSEESA 225
Query: 250 YVNGNTLIVDGG 261
Y+ G L VDGG
Sbjct: 226 YITGQALYVDGG 237
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Score = 151 bits (381), Expect = 5e-45
Identities = 76/265 (28%), Positives = 112/265 (42%), Gaps = 20/265 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GK AL+TG GIG + + GA +AI R+ A + G A + D
Sbjct: 3 LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI---GPAACAIALD 59
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + R V ++ +G +DILVN AA L P +++ + + I+ GT M
Sbjct: 60 VTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQ 119
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
+ + GGRG IIN+++ A KAAV S+T+S L
Sbjct: 120 AVARAMIAGGRGG-------KIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLI- 171
Query: 190 DYAIRVNGIAPGP---------IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
+ I VN IAPG A L E + + + + G D+ A
Sbjct: 172 RHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMA 231
Query: 241 LYLASDAGKYVNGNTLIVDGGNWLS 265
++LA+ Y+ T VDGGNW+S
Sbjct: 232 IFLATPEADYIVAQTYNVDGGNWMS 256
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Score = 151 bits (381), Expect = 6e-45
Identities = 65/267 (24%), Positives = 111/267 (41%), Gaps = 24/267 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
GKV L+TG G IG +L+L + G AIA++ + L A A++ G+ A D
Sbjct: 3 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCD 62
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
V E + V+S + FGK+D L N A P +D + F V+ I+ G F +
Sbjct: 63 VTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVL 122
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
+ + G+ I+N ++ +K A+ ++T + AL+
Sbjct: 123 KAVSRQMITQNYGR--------IVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLA 174
Query: 189 TDYAIRVNGIAPGPI--------------KDTAGVSKLAPEEIRSKATDYMAAYKFGEKW 234
Y IRVN I+PG + K + P+ + + + ++G+
Sbjct: 175 -PYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDIN 233
Query: 235 DIAMAALYLASDAGKYVNGNTLIVDGG 261
+I +L D ++ G L + GG
Sbjct: 234 EIPGVVAFLLGDDSSFMTGVNLPIAGG 260
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Score = 149 bits (376), Expect = 2e-44
Identities = 57/252 (22%), Positives = 108/252 (42%), Gaps = 25/252 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
++ K L+ GIG ++ L + GA + I R + +L+ + + D
Sbjct: 2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRY---------VVCD 52
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
+RK D + ++DILV A G ++L+ F+ I+ + +
Sbjct: 53 LRKDLDLL------FEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVR 106
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
L +K+ G G+ I+ I++ + ++A+ A+ ++L+ E
Sbjct: 107 NYLPAMKEKGWGR--------IVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVA- 157
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK 249
Y I VN +APG +T V +L EE + + + + + +IA +L S+
Sbjct: 158 PYGITVNCVAPGWT-ETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKAS 216
Query: 250 YVNGNTLIVDGG 261
Y+ G T++VDGG
Sbjct: 217 YLTGQTIVVDGG 228
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 149 bits (376), Expect = 3e-44
Identities = 60/256 (23%), Positives = 99/256 (38%), Gaps = 21/256 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L GKV +LT GIG +L + GA + ++ L+ G++
Sbjct: 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK--------YPGIQTR 55
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V ++ + N +LD+L N A D + + ++ ++M
Sbjct: 56 VLDVTKKKQIDQ-FANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIK 114
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
L + SG II S + S KAAV +T+S+A ++
Sbjct: 115 AFLPKMLAQ-------KSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFI- 166
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY----KFGEKWDIAMAALYLAS 245
IR N + PG + + ++ +A + +F +IAM +YLAS
Sbjct: 167 QQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLAS 226
Query: 246 DAGKYVNGNTLIVDGG 261
D YV GN +I+DGG
Sbjct: 227 DESAYVTGNPVIIDGG 242
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Score = 149 bits (377), Expect = 3e-44
Identities = 45/255 (17%), Positives = 94/255 (36%), Gaps = 24/255 (9%)
Query: 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRE 74
A++T G +L+L + G +A A + +
Sbjct: 3 AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFA------ETYPQLKPMSEQ 56
Query: 75 DAVRVVESTINHFGKLDILVNAAAGNFLV-PAEDLSPNGFRTVIEIDSVGTFIMCHEALK 133
+ ++E+ + +G++D+LV+ P + + +R +E + F + +
Sbjct: 57 EPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVAS 116
Query: 134 YLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAI 193
+KK G II I++ + ++A+A ++ +L+ E G +Y I
Sbjct: 117 QMKKRKSGH--------IIFITSATPFGPWKELSTYTSARAGACTLANALSKELG-EYNI 167
Query: 194 RVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-------FGEKWDIAMAALYLASD 246
V I P + + P E +++A K G + ++ +LAS
Sbjct: 168 PVFAIGPNYL-HSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASG 226
Query: 247 AGKYVNGNTLIVDGG 261
+ Y+ G + GG
Sbjct: 227 SCDYLTGQVFWLAGG 241
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Score = 147 bits (373), Expect = 7e-44
Identities = 69/255 (27%), Positives = 110/255 (43%), Gaps = 14/255 (5%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+GK+AL+TG GIG I+ L GA + + ++ LG GL +
Sbjct: 2 FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDY---LGANGKGLMLN 58
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V V+E FG++DILVN A + + +IE + F +
Sbjct: 59 VTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSK 118
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
++ + K G II I + + Q + +AAKA + ++SLA E
Sbjct: 119 AVMRAMMKKR--------HGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVA- 169
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK 249
I VN +APG I+ + ++ R+ + A + G +IA A +LASD
Sbjct: 170 SRGITVNVVAPGFIETDMTRAL--SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAA 227
Query: 250 YVNGNTLIVDGGNWL 264
Y+ G TL V+GG ++
Sbjct: 228 YITGETLHVNGGMYM 242
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Score = 146 bits (370), Expect = 3e-43
Identities = 77/266 (28%), Positives = 110/266 (41%), Gaps = 23/266 (8%)
Query: 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA--LHSLGIPAIGL 66
+LKGKVA++TG SGIG I+ L GA I + G V A G+ +
Sbjct: 1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYD 60
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
D+ K E +V++ + G++DILVN A ED + ++ ++ F
Sbjct: 61 GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFH 120
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
AL ++KK G G IINI++ A+ + AAK V T+ ALE
Sbjct: 121 GTAAALPHMKKQGF--------GRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALE 172
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-----------FGEKWD 235
I N I PG + T V K D A + F
Sbjct: 173 TA-GQGITANAICPGWV-RTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQ 230
Query: 236 IAMAALYLASDAGKYVNGNTLIVDGG 261
+ A++LASDA + G T+ VDGG
Sbjct: 231 LGGTAVFLASDAAAQITGTTVSVDGG 256
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 145 bits (367), Expect = 5e-43
Identities = 63/255 (24%), Positives = 109/255 (42%), Gaps = 22/255 (8%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+ L+TGG GIG I+ +L G +A+ R + G+E D
Sbjct: 5 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG-----------LFGVEVD 53
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V + R + H G +++LV+ A + ++ F VI + G F +
Sbjct: 54 VTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQ 113
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
A + +++ G+ +I I + Q + +A+KA V + RS+A E +
Sbjct: 114 RASRSMQRNKFGR--------MIFIGSVSGLWGIGNQANYAASKAGVIGMARSIAREL-S 164
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK 249
+ N +APG I DT L E I+ A ++ A + G ++A +LAS+
Sbjct: 165 KANVTANVVAPGYI-DTDMTRAL-DERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDAS 222
Query: 250 YVNGNTLIVDGGNWL 264
Y++G + VDGG +
Sbjct: 223 YISGAVIPVDGGMGM 237
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Score = 145 bits (366), Expect = 8e-43
Identities = 69/258 (26%), Positives = 110/258 (42%), Gaps = 17/258 (6%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
KVAL+TG G GIG I+L+L K G A+AI ++ + ++ G A+ ++ DV
Sbjct: 2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 61
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
R+ VE G D++VN A P E ++P V I+ G A+
Sbjct: 62 RDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAV 121
Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
+ KK G G IIN + + S++K AV +T++ A +
Sbjct: 122 EAFKKEGHGG-------KIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLA-PLG 173
Query: 193 IRVNGIAPGPI---------KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
I VNG PG + + + + ++ + + E D+A YL
Sbjct: 174 ITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYL 233
Query: 244 ASDAGKYVNGNTLIVDGG 261
AS Y+ G +L++DGG
Sbjct: 234 ASPDSDYMTGQSLLIDGG 251
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Score = 144 bits (365), Expect = 1e-42
Identities = 37/249 (14%), Positives = 80/249 (32%), Gaps = 12/249 (4%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+ G++ L+TG G GIG + + K + + + K L A LG D
Sbjct: 5 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVD 64
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
RED + G + ILVN A + E++ + F
Sbjct: 65 CSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTK 124
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
L + K G I+ +++ + + + + ++K A ++L E
Sbjct: 125 AFLPAMTKNN--------HGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAA 176
Query: 190 --DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
++ + P + +T + + + + + + +++ S
Sbjct: 177 LQITGVKTTCLCPNFV-NTGFIKNPSTSLGPTLEPEEVVN-RLMHGILTEQKMIFIPSSI 234
Query: 248 GKYVNGNTL 256
+
Sbjct: 235 AFLTTLERI 243
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Score = 143 bits (361), Expect = 5e-42
Identities = 50/254 (19%), Positives = 80/254 (31%), Gaps = 19/254 (7%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-HSLGIPAIGLEG 68
L K + GIG + S +L K ++ R + + +
Sbjct: 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTY 62
Query: 69 DV-RKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
DV ++ ++++ + +DIL+N A L + I I+ G
Sbjct: 63 DVTVPVAESKKLLKKIFDQLKTVDILINGAG--------ILDDHQIERTIAINFTGLVNT 114
Query: 128 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 187
L + + GGII NI + + A SA+KAAV S T SLA
Sbjct: 115 TTAILDF-----WDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLA 169
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247
+ I PG T V + + + A +A
Sbjct: 170 P-ITGVTAYSINPGIT-RTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEA 227
Query: 248 GKYVNGNTLIVDGG 261
NG +D G
Sbjct: 228 --NKNGAIWKLDLG 239
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Score = 140 bits (353), Expect = 6e-41
Identities = 68/251 (27%), Positives = 113/251 (45%), Gaps = 13/251 (5%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVR 71
V ++TG GIG I+L LGK G + + R + + G AI GDV
Sbjct: 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS 61
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
K D ++++ I+ +G +D++VN A + + + VI+++ G F+ A
Sbjct: 62 KEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAA 121
Query: 132 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY 191
K + K G IINI++ + Q + +AAKA V +++ A E
Sbjct: 122 TKIMMKKR--------KGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGA-SR 172
Query: 192 AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA-SDAGKY 250
I VN + PG I + +KL E++ K + + G+ ++A +LA S A Y
Sbjct: 173 NINVNVVCPGFI-ASDMTAKL-GEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASY 230
Query: 251 VNGNTLIVDGG 261
+ G +DGG
Sbjct: 231 ITGQAFTIDGG 241
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 140 bits (354), Expect = 8e-41
Identities = 53/262 (20%), Positives = 98/262 (37%), Gaps = 20/262 (7%)
Query: 1 MESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG 60
+ F+ ++L+GK ++TG GIG E++ L K GA + + R K L+ V+ LG
Sbjct: 3 LNEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG 62
Query: 61 IP-AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 119
A + G + A + V G LD+L+ N + + R +E+
Sbjct: 63 AASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEV 122
Query: 120 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSI 179
+ + ++ AL LK+ G I+ +S+ A SA+K A+D
Sbjct: 123 NFLSYVVLTVAALPMLKQS---------NGSIVVVSSLAGKVAYPMVAAYSASKFALDGF 173
Query: 180 TRSLALEWGTD-YAIRVNGIAPGPIK---------DTAGVSKLAPEEIRSKATDYMAAYK 229
S+ E+ + + G I + EE + A +
Sbjct: 174 FSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGALRQ 233
Query: 230 FGEKWDIAMAALYLASDAGKYV 251
+D ++ L + + +
Sbjct: 234 EEVYYDSSLWTTLLIRNPSRKI 255
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Score = 135 bits (341), Expect = 3e-39
Identities = 46/258 (17%), Positives = 83/258 (32%), Gaps = 29/258 (11%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGA-------AIAIMGRRKTVLRSAVAALHSLGIPAIG 65
+ L+TG G GIG I+L+ + + + R L + G
Sbjct: 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT 61
Query: 66 LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 125
+ D+ D R+ + +G +D LVN A DL+ F + + GTF
Sbjct: 62 ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTF 121
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
+ +++ G I I++ A + +K + ++ L
Sbjct: 122 FLTQALFALMERQH--------SGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRL 173
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245
+R+ + PG + T + K D M A DIA +
Sbjct: 174 YAR-KCNVRITDVQPGAV-YT---------PMWGKVDDEMQA-LMMMPEDIAAPVVQAYL 221
Query: 246 DAGKYVNGNTLI--VDGG 261
+ V ++ G
Sbjct: 222 QPSRTVVEEIILRPTSGD 239
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Score = 135 bits (339), Expect = 1e-38
Identities = 59/262 (22%), Positives = 99/262 (37%), Gaps = 18/262 (6%)
Query: 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA--LHSLGIPAIGLEGDVR 71
A++TGG IG I+++L + G + + R + A + A+ +GD+
Sbjct: 3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 62
Query: 72 K----REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 127
+ +++ + FG+ D+LVN A+ + P + +
Sbjct: 63 LSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAEL 122
Query: 128 CHEALK--------YLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSI 179
+ ++ G G A S ++N+ + + AK A+ +
Sbjct: 123 FGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGL 182
Query: 180 TRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239
TR+ ALE IRVN +APG + + EE R K IA A
Sbjct: 183 TRAAALELA-PRHIRVNAVAPGLSLLPPAMPQETQEEYRRKV---PLGQSEASAAQIADA 238
Query: 240 ALYLASDAGKYVNGNTLIVDGG 261
+L S Y+ G TL VDGG
Sbjct: 239 IAFLVSKDAGYITGTTLKVDGG 260
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 134 bits (338), Expect = 1e-38
Identities = 49/266 (18%), Positives = 86/266 (32%), Gaps = 25/266 (9%)
Query: 8 DILKGKVALLTGGGSGIGFEISLQLGK---HGAAIAIMGRRKTVLRSAVAALHS--LGIP 62
D L V +LTG G G ++ QL + G+ + + R +++LR L + +
Sbjct: 2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLK 61
Query: 63 AIGLEGDVRKREDAVRVV----ESTINHFGKLDILVNAAAGNFLVPA---EDLSPNGFRT 115
+ D+ R++ E + +L+N AA V
Sbjct: 62 VVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNN 121
Query: 116 VIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAA 175
++ + L + ++NIS+ A KAA
Sbjct: 122 YWALNLTSMLCLTSGTLNAFQDSPGLS------KTVVNISSLCALQPYKGWGLYCAGKAA 175
Query: 176 VDSITRSLALEWGTDYAIRVNGIAPGPIK---DTAGVSKLAPEEIRSKATDYMAAYKFGE 232
D + + LA E ++RV APGP+ E+RSK + +
Sbjct: 176 RDMLYQVLAAEE---PSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVD 232
Query: 233 KWDIAMAALYLASDAGKYVNGNTLIV 258
A L L + +G +
Sbjct: 233 CGTSAQKLLGLLQKD-TFQSGAHVDF 257
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Score = 134 bits (338), Expect = 1e-38
Identities = 58/258 (22%), Positives = 104/258 (40%), Gaps = 18/258 (6%)
Query: 10 LKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLE 67
L GK AL+ G + +GF I+ +L + GA +A+ + + + A +LG +
Sbjct: 6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLF-R 64
Query: 68 GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP----AEDLSPNGFRTVIEIDSVG 123
DV + E+ + FG LD LV+A A D + +E+ +
Sbjct: 65 ADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYS 124
Query: 124 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 183
+ A L++GG I+ ++ ++ AKAA+++ R L
Sbjct: 125 LVAVARRAEPLLREGGG----------IVTLTYYASEKVVPKYNVMAIAKAALEASVRYL 174
Query: 184 ALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243
A E G +RVN I+ GP++ A S ++ + + + ++ L+L
Sbjct: 175 AYELG-PKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFL 233
Query: 244 ASDAGKYVNGNTLIVDGG 261
S + G + VD G
Sbjct: 234 LSPLASGITGEVVYVDAG 251
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 131 bits (329), Expect = 2e-37
Identities = 63/259 (24%), Positives = 107/259 (41%), Gaps = 22/259 (8%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
+ AL+TGG SG+G +L L G + ++ R+ G I +EGDV +
Sbjct: 2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE------------GEDLIYVEGDVTR 49
Query: 73 REDAVRVVESTINHFGKLDILVNA---AAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
ED R V ++ A A L FR V+E++ +GTF +
Sbjct: 50 EEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLR 109
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
A +++ + G+I+N ++ + Q +A+K V ++T A E
Sbjct: 110 LAAWAMRE--NPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELA- 166
Query: 190 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK 249
+ IRV +APG DT + L + S A + G + A L++ +
Sbjct: 167 GWGIRVVTVAPGLF-DTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHILENP-- 223
Query: 250 YVNGNTLIVDGGNWLSNPR 268
+NG + +DG ++ PR
Sbjct: 224 MLNGEVVRLDGALRMA-PR 241
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 124 bits (311), Expect = 2e-34
Identities = 54/278 (19%), Positives = 88/278 (31%), Gaps = 54/278 (19%)
Query: 13 KVALLTGGGSGIGFEISLQLGK-HGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
VAL+TGG GIG I L + + + R T ++AV L + G+ + D+
Sbjct: 4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDID 63
Query: 72 KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 131
+ + + +G LD+LVN A F V ++ + GT +C E
Sbjct: 64 DLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTEL 123
Query: 132 LKYLKKGGRGQASSSSGGI-------------------------------IINISATLHY 160
L +K GR SS + + + +H
Sbjct: 124 LPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQ 183
Query: 161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYA---IRVNGIAPGPIKDTAGVSKLAPEEI 217
W K V ++R A + I +N PG ++
Sbjct: 184 KEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVR------------- 230
Query: 218 RSKATDYMAAYKFGEKWDIAMAALYLA--SDAGKYVNG 253
TD + A +YLA + +G
Sbjct: 231 ----TDMAGPKATKSPEEGAETPVYLALLPPDAEGPHG 264
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 121 bits (305), Expect = 7e-34
Identities = 42/259 (16%), Positives = 77/259 (29%), Gaps = 33/259 (12%)
Query: 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDV 70
+ + L+ GG +G +A + + SA + +
Sbjct: 1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVK--------MTDSF 52
Query: 71 RKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
++ D V + K+D ++ A G + + + I H
Sbjct: 53 TEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSH 112
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG- 188
A K+LK+GG + + + T I AK AV + +SLA +
Sbjct: 113 LATKHLKEGGLLTLAGAKAALD----------GTPGMIGYGMAKGAVHQLCQSLAGKNSG 162
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
+ P + DT K PE S + + +
Sbjct: 163 MPSGAAAIAVLPVTL-DTPMNRKSMPEADFS---------SWTPLEFLVETFHDWITGNK 212
Query: 249 KYVNGNTLIV---DGGNWL 264
+ +G+ + V DG L
Sbjct: 213 RPNSGSLIQVVTTDGKTEL 231
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Score = 121 bits (304), Expect = 1e-33
Identities = 55/260 (21%), Positives = 95/260 (36%), Gaps = 19/260 (7%)
Query: 9 ILKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGL 66
L GK L+TG S I + I+ + + GA +A + L+ V + I L
Sbjct: 2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDK-LKGRVEEFAAQLGSDIVL 60
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN-----GFRTVIEIDS 121
+ DV + + + K D V++ + N GF+ +I S
Sbjct: 61 QCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISS 120
Query: 122 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITR 181
M L G ++ +S A + AKA++++ R
Sbjct: 121 YSFVAMAKACRSMLNPGS----------ALLTLSYLGAERAIPNYNVMGLAKASLEANVR 170
Query: 182 SLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241
+A G +RVN I+ GPI+ A ++ + + D+ +A
Sbjct: 171 YMANAMG-PEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAA 229
Query: 242 YLASDAGKYVNGNTLIVDGG 261
+L SD ++G + VDGG
Sbjct: 230 FLCSDLSAGISGEVVHVDGG 249
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 117 bits (294), Expect = 3e-32
Identities = 48/252 (19%), Positives = 99/252 (39%), Gaps = 9/252 (3%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL---HSLGIPAIGL 66
+KG VA++TGG SG+G + +L GA+ ++ + + L +
Sbjct: 3 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTS 62
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
E DV+ + ++ + A+ L + + F+ V++++ +GTF
Sbjct: 63 EKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFN 122
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
+ + + G+IIN ++ + Q SA+K + +T +A +
Sbjct: 123 VIRLVAGEMGQ--NEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARD 180
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
IRV IAPG T ++ L + A+ + G+ + A + +
Sbjct: 181 LA-PIGIRVMTIAPGLF-GTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIEN 238
Query: 247 AGKYVNGNTLIV 258
++NG + +
Sbjct: 239 P--FLNGEVIRL 248
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Score = 116 bits (290), Expect = 2e-31
Identities = 57/255 (22%), Positives = 91/255 (35%), Gaps = 10/255 (3%)
Query: 9 ILKGKVALLTG--GGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGL 66
LKGK L+ G I + I+ GA +A +++ + V +
Sbjct: 2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEK-RVRPIAQELNSPYVY 60
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
E DV K E + S G LD +V++ A E ++ +
Sbjct: 61 ELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVY 120
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
E LK +G ++ +S + + AKAA++S R LA++
Sbjct: 121 SLIELTNTLKPLLN------NGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVD 174
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246
G + IRVN ++ GPI+ A I K ++ A +YL S
Sbjct: 175 LG-KHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSS 233
Query: 247 AGKYVNGNTLIVDGG 261
V+G VD G
Sbjct: 234 LSSGVSGEVHFVDAG 248
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Score = 112 bits (279), Expect = 8e-30
Identities = 57/285 (20%), Positives = 100/285 (35%), Gaps = 39/285 (13%)
Query: 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL----------------- 56
VAL+TG +G I+ L G A+ + R +A++A
Sbjct: 4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 63
Query: 57 --HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFR 114
+ + V +V + H+G+ D+LVN A+ + P +G
Sbjct: 64 NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHE 123
Query: 115 T--------------VIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 160
+ +++ + + + + IIN+ +
Sbjct: 124 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGT--NYSIINMVDAMTN 181
Query: 161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK 220
+ AK A++ +TRS ALE IRVNG+ PG + E RSK
Sbjct: 182 QPLLGYTIYTMAKGALEGLTRSAALELA-PLQIRVNGVGPGLSVLVDDMPPAVWEGHRSK 240
Query: 221 ATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265
+ +++ ++L S KY+ G + VDGG L+
Sbjct: 241 VP---LYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT 282
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 106 bits (266), Expect = 2e-28
Identities = 50/256 (19%), Positives = 81/256 (31%), Gaps = 36/256 (14%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVR 71
GKV ++ GG +G I K+G + + + I ++G+
Sbjct: 3 GKV-IVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADS----------NILVDGNKN 51
Query: 72 KREDAVRVVEST--INHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
E ++E T ++D + A G + +I+ + I
Sbjct: 52 WTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAA 111
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW- 187
A +LK GG + A T I AKAAV +T SLA +
Sbjct: 112 KLATTHLKPGGL----------LQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDS 161
Query: 188 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL-YLASD 246
G V I P + DT K P S + I+ L +
Sbjct: 162 GLPDNSAVLTIMPVTL-DTPMNRKWMPNADHS---------SWTPLSFISEHLLKWTTET 211
Query: 247 AGKYVNGNTLIVDGGN 262
+ + +G L + N
Sbjct: 212 SSRPSSGALLKITTEN 227
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 102 bits (255), Expect = 2e-26
Identities = 44/263 (16%), Positives = 75/263 (28%), Gaps = 31/263 (11%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
+ +++G +GIG L G I + R + V A D+
Sbjct: 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRD----AEVIA-------------DLST 44
Query: 73 REDAVRVVESTINHFGK-LDILVNAAAGNFLVPAED------------LSPNGFRTVIEI 119
E + + + K +D LV A L + +
Sbjct: 45 AEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKG 104
Query: 120 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL-HYTATWYQIHVSAAKAAVDS 178
++ A +L A + G A + H + + +K A+
Sbjct: 105 HQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTV 164
Query: 179 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 238
R A WG P S A + E ++A
Sbjct: 165 AVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSEMAS 224
Query: 239 AALYLASDAGKYVNGNTLIVDGG 261
+L S A YV+G +++DGG
Sbjct: 225 VIAFLMSPAASYVHGAQIVIDGG 247
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Score = 101 bits (252), Expect = 4e-26
Identities = 33/210 (15%), Positives = 68/210 (32%), Gaps = 19/210 (9%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGIPAIGLE 67
+ ++TG GIG + QL K I R + L
Sbjct: 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI---KDSRVHVLP 57
Query: 68 GDVRKREDAVRVVESTINHFGK--LDILVNAAAGNFLV-PAEDLSPNGFRTVIEIDSVGT 124
V + V G L +L+N A + + +++++
Sbjct: 58 LTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSV 117
Query: 125 FIMCHEALKYLKKGGRGQASSSSG----------GIIINISATLHYTATWYQIHVSAAKA 174
++ + L LK ++ + +I+ +A + + +KA
Sbjct: 118 VLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKA 177
Query: 175 AVDSITRSLALEWGTDYAIRVNGIAPGPIK 204
A++ R+LA++ D + V PG ++
Sbjct: 178 AINMFGRTLAVDLK-DDNVLVVNFCPGWVQ 206
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 93.8 bits (232), Expect = 5e-23
Identities = 53/237 (22%), Positives = 95/237 (40%), Gaps = 21/237 (8%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGR------RKTVLRSAVAALHSLGIPAIGL 66
V L+TG SGIG ++++L + + + L A AL L
Sbjct: 3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62
Query: 67 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
+ DVR + E D+LV A L P E L + +V++++ VGT
Sbjct: 63 QLDVRDSKSVAAARERVTEGRV--DVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVR 120
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 186
M L +K+ G G ++ + + A+K A++ + SLA+
Sbjct: 121 MLQAFLPDMKRRGS--------GRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVL 172
Query: 187 WGTDYAIRVNGIAPGPIKDTAGVSKL--APEEIRSKATDYMAAYKFGEKWDIAMAAL 241
+ + ++ I GP+ TA + K+ +PEE+ + TD ++F + +
Sbjct: 173 LL-PFGVHLSLIECGPV-HTAFMEKVLGSPEEVLDR-TDIHTFHRFYQYLAHSKQVF 226
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Score = 89.8 bits (221), Expect = 1e-21
Identities = 48/267 (17%), Positives = 84/267 (31%), Gaps = 21/267 (7%)
Query: 9 ILKGKVALLTG--GGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA-LHSLGIPAIG 65
+L GK L++G S I F I+ + GA + + G + L + L +
Sbjct: 3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLEL 62
Query: 66 LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 125
+ V I KLD +V++ + G +
Sbjct: 63 DVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFM------PQTGMGINPFFDAPYADVS 116
Query: 126 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
H + + + G I A ++ AK+A++S+ R +A
Sbjct: 117 KGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVAR 176
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-----------FGEKW 234
E Y +R N +A GPI+ A + + + +
Sbjct: 177 EA-GKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDAT 235
Query: 235 DIAMAALYLASDAGKYVNGNTLIVDGG 261
+A L SD G+ + DGG
Sbjct: 236 PVAKTVCALLSDWLPATTGDIIYADGG 262
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Score = 86.0 bits (211), Expect = 4e-20
Identities = 53/288 (18%), Positives = 85/288 (29%), Gaps = 45/288 (15%)
Query: 10 LKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL----------- 56
L+GK A + G G G+ ++ L GA I + + +
Sbjct: 6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLP 65
Query: 57 ---------------------HSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVN 95
E FG +DILV+
Sbjct: 66 DGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVH 125
Query: 96 AAAGNFLV--PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIIN 153
+ A V P + S G+ I S + L + GG + + I
Sbjct: 126 SLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERII 185
Query: 154 ISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA 213
++ + TR LA E G IRVN I+ GP+ A +
Sbjct: 186 PGYGGGMSSAKAALES---------DTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGF 236
Query: 214 PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 261
+ + + + K ++ AA +L S + G T+ VD G
Sbjct: 237 IDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNG 284
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 79.0 bits (193), Expect = 7e-18
Identities = 43/261 (16%), Positives = 82/261 (31%), Gaps = 31/261 (11%)
Query: 13 KVALLTGGGSGIGFEIS---LQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
L+TG G+G + L L + + R + + + L LE D
Sbjct: 3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAK-ELEDLAKNHSNIHILEID 61
Query: 70 VRKRE--DAVRVVESTINHFGKLDILV-NAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 126
+R + D + + L++L NA + ++ ++V +
Sbjct: 62 LRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIM 121
Query: 127 MCHEALKYLKKGGRGQASSSSGGIIIN------ISATLHYTATWYQIHVSAAKAAVDSIT 180
+ L LKK + S G I ++ +K+A+++ T
Sbjct: 122 LAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAAT 181
Query: 181 RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240
+SL+++ I + PG + T AP ++ + I
Sbjct: 182 KSLSVDLY-PQRIMCVSLHPGWV-KTDMGGSSAPLDVPTSTG------------QIVQTI 227
Query: 241 LYLASDAGKYVNGNTLIVDGG 261
L NG + DG
Sbjct: 228 SKLGEK----QNGGFVNYDGT 244
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Score = 78.0 bits (190), Expect = 5e-17
Identities = 46/329 (13%), Positives = 88/329 (26%), Gaps = 88/329 (26%)
Query: 12 GKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRR----------------KTVLRSAV 53
+ + G G G G+ I+ +L K I ++
Sbjct: 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKD 61
Query: 54 AALHSLGI----------------PAIGLEGDVRKREDAVRVVESTINHFGKLDILVN-- 95
++ L + ++ + V +GK+++LV+
Sbjct: 62 KKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSL 121
Query: 96 AAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS 155
A A + S G+ + S +C + +K + + +
Sbjct: 122 ANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVVPG 181
Query: 156 ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG------- 208
++ + TR LA G +Y IR+N I+ GP+K A
Sbjct: 182 YGGGMSSAKAALES---------DTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLN 232
Query: 209 ------------------------------------VSKLAPEEIRSKATDYMAAYKFGE 232
+ + + Y +
Sbjct: 233 NTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLL 292
Query: 233 KWDIAMAALYLASDAGKYVNGNTLIVDGG 261
DI A +L S + + G T+ VD G
Sbjct: 293 STDIGSVASFLLSRESRAITGQTIYVDNG 321
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 62.3 bits (150), Expect = 6e-12
Identities = 34/240 (14%), Positives = 66/240 (27%), Gaps = 27/240 (11%)
Query: 12 GKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSAVAALHSLG--IPAIGLEG 68
L+TGG G+G +I+ L + GA + ++ R A + L +
Sbjct: 9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAA 68
Query: 69 DVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 128
++VR + I L + +AAA + L+ +G +
Sbjct: 69 CDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLH 128
Query: 129 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG 188
+ + S+ + A +D + + +
Sbjct: 129 ELTRE------------LDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQQRRSDG- 175
Query: 189 TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248
+ +A G + + R M + A AL A D
Sbjct: 176 ----LPATAVAWGTWAGSGMAEGPVADRFRRHGVIEMPP-------ETACRALQNALDRA 224
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 60.5 bits (145), Expect = 2e-11
Identities = 28/206 (13%), Positives = 58/206 (28%), Gaps = 10/206 (4%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
+VALL G G +G ++L+L G I + RR+ + A + A
Sbjct: 2 RVALLGGTG-NLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNED 60
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
+A + TI +D + R
Sbjct: 61 AAEACDIAVLTIPWEHAIDTARDLKNILREKIVVSPLVPVSRGAKGFTYSSERSAAEIVA 120
Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
+ L+ A + + + D ++ + + ++
Sbjct: 121 EVLESEKVVSALHTIPA--------ARFANLDEKFDWDVPVCGDDDESKKVVMSLISE-I 171
Query: 193 IRVNGIAPGPIKDTAGVSKLAPEEIR 218
+ + GP+ ++ V L P +
Sbjct: 172 DGLRPLDAGPLSNSRLVESLTPLILN 197
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Score = 57.2 bits (137), Expect = 2e-10
Identities = 25/183 (13%), Positives = 52/183 (28%), Gaps = 20/183 (10%)
Query: 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGD 69
+KGK A++ G +G + L GA + + GR+ ++A ++
Sbjct: 21 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAA--------DSVNKRFK 72
Query: 70 VRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 129
V S + A A + E L ++ I+ V +
Sbjct: 73 VNVTAAETADDASRAEAVKGAHFVFTAGA----IGLELLPQAAWQNESSIEIVADYNAQP 128
Query: 130 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT 189
G ++ G A + + +A + + S +
Sbjct: 129 PLGI------GGIDATDKGKEYGGKRAFGALGIG--GLKLKLHRACIAKLFESSEGVFDA 180
Query: 190 DYA 192
+
Sbjct: 181 EEI 183
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.3 bits (93), Expect = 2e-04
Identities = 32/226 (14%), Positives = 66/226 (29%), Gaps = 15/226 (6%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
VAL+TG G ++ L + G + + RR + + H P +EG+++
Sbjct: 2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIE-HLYKNPQAHIEGNMKL 60
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
+ + ++ +S + ++D VGT +
Sbjct: 61 HYGDLTDSTCLVKIINEVKP--TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVK 118
Query: 133 KYLKKGGRG--QASSSS-----GGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLAL 185
QAS+S I + + + Y AAK I +
Sbjct: 119 TCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPR-SPY----GAAKLYAYWIVVNFRE 173
Query: 186 EWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG 231
+ + P + V++ + + + G
Sbjct: 174 AYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLG 219
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 37.4 bits (86), Expect = 0.001
Identities = 37/200 (18%), Positives = 66/200 (33%), Gaps = 34/200 (17%)
Query: 16 LLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGL-EGDVRKRE 74
L+TGG IG + + K+ + + T + + D+
Sbjct: 4 LITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSA 63
Query: 75 DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 134
+ R+ E + D +++ AA V P F IE + VGT+ + A KY
Sbjct: 64 EITRIFEQ-----YQPDAVMHLAA-ESHVDRSITGPAAF---IETNIVGTYALLEVARKY 114
Query: 135 LKKGGRGQASSSSGGIIINISATLHYTATWYQIHV---------------------SAAK 173
G + ++ +IS Y + V SA+K
Sbjct: 115 WSALGEDKKNNF---RFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASK 171
Query: 174 AAVDSITRSLALEWGTDYAI 193
A+ D + R+ +G +
Sbjct: 172 ASSDHLVRAWRRTYGLPTIV 191
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Score = 36.9 bits (84), Expect = 0.002
Identities = 43/239 (17%), Positives = 77/239 (32%), Gaps = 15/239 (6%)
Query: 16 LLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGL-EGDVRKRE 74
L+TGG IG +QL ++G + I+ RS + + LG EGD+R
Sbjct: 4 LVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEA 63
Query: 75 DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 134
I H +D +++ A + A S + + GT +
Sbjct: 64 LMTE-----ILHDHAIDTVIHFAG----LKAVGESVQKPLEYYDNNVNGTLRLISAMRAA 114
Query: 135 LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIR 194
K +S++ G I + Q +K V+ I
Sbjct: 115 NVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTD---LQKAQPDWS 171
Query: 195 VNGIAPGPI--KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYV 251
+ + +G P+ I + Y+A G + +A+ ++ G V
Sbjct: 172 IALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGV 230
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 36.1 bits (82), Expect = 0.004
Identities = 28/209 (13%), Positives = 63/209 (30%), Gaps = 9/209 (4%)
Query: 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK 72
+ AL+TG G ++ L + G + + R++ + +GD+
Sbjct: 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMAD 60
Query: 73 REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEAL 132
R V + ++ P +G +G +
Sbjct: 61 ACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDG---------LGVTHLLEAIR 111
Query: 133 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 192
++ + QAS+S +I T + + AK IT + +G +
Sbjct: 112 QFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESFGLHAS 171
Query: 193 IRVNGIAPGPIKDTAGVSKLAPEEIRSKA 221
+ P++ V++ + +
Sbjct: 172 SGILFNHESPLRGIEFVTRKVTDAVARIK 200
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 298 | |||
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 100.0 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 100.0 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 100.0 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 100.0 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 100.0 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 100.0 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 100.0 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 100.0 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 100.0 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 100.0 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 100.0 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 100.0 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 100.0 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 100.0 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 100.0 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 100.0 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 100.0 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 100.0 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 100.0 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 100.0 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 100.0 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 100.0 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 100.0 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 100.0 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 100.0 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 100.0 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 100.0 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 100.0 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 100.0 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 100.0 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 100.0 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 100.0 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 100.0 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 100.0 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 100.0 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 100.0 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 100.0 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 100.0 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 100.0 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 100.0 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 100.0 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 100.0 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 100.0 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 100.0 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 100.0 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 100.0 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 100.0 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 100.0 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 100.0 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 100.0 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 100.0 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 100.0 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 100.0 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 100.0 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 100.0 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 100.0 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 100.0 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 100.0 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 100.0 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 100.0 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 100.0 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 100.0 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 100.0 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 100.0 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.97 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.85 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 99.79 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.78 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.76 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.75 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.74 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.7 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.7 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.7 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.69 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.69 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.68 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.68 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.68 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.67 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.67 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.67 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.66 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.64 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.62 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.59 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.59 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.58 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.52 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.35 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.27 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.26 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.21 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.2 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.08 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.01 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 98.9 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 98.1 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 97.87 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 97.82 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 97.81 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 97.77 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 97.77 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 97.73 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 97.66 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 97.65 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 97.64 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 97.63 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 97.62 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 97.59 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.45 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 97.41 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 97.37 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 97.34 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 97.19 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 97.18 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 97.18 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 97.17 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 97.1 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 96.99 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 96.94 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 96.91 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 96.91 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 96.88 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 96.88 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 96.86 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 96.82 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 96.79 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 96.79 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 96.77 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 96.77 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 96.75 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 96.73 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 96.73 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 96.7 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 96.7 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 96.67 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 96.61 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 96.59 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 96.56 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 96.52 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 96.48 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 96.36 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 96.28 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 96.27 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 96.26 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 96.21 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 96.19 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 96.16 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 96.15 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 96.14 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 96.08 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 96.07 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 96.04 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 96.02 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 96.01 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 96.01 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 95.99 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 95.93 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 95.9 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 95.88 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 95.82 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 95.8 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 95.76 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 95.7 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 95.66 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 95.64 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 95.49 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 95.25 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 95.02 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 94.99 | |
| d1wy7a1 | 201 | Hypothetical protein PH1948 {Archaeon Pyrococcus h | 94.93 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 94.92 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 94.84 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 94.66 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 94.57 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 94.53 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 94.44 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 94.43 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 94.38 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 94.38 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 94.12 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 93.81 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 93.57 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 93.56 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 93.55 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 93.52 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 93.47 | |
| d1ne2a_ | 197 | Hypothetical protein Ta1320 {Archaeon Thermoplasma | 93.44 | |
| d1m6ya2 | 192 | TM0872, methyltransferase domain {Thermotoga marit | 93.17 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 93.14 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 93.06 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 93.05 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 93.0 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 92.98 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 92.97 | |
| d1u0sy_ | 118 | CheY protein {Thermotoga maritima [TaxId: 2336]} | 92.97 | |
| d1wzna1 | 251 | Hypothetical methyltransferase PH1305 {Archaeon Py | 92.64 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 92.54 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 92.53 | |
| d1wxxa2 | 318 | Hypothetical protein TTHA1280, middle and C-termin | 92.5 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 92.42 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 92.42 | |
| d1y8ca_ | 246 | Putative methyltransferase CAC2371 {Clostridium ac | 92.39 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 91.99 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 91.93 | |
| d2nxca1 | 254 | PrmA-like protein TTHA0656 (TT0836) {Thermus therm | 91.85 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 91.65 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 91.52 | |
| d1p9oa_ | 290 | Phosphopantothenoylcysteine synthetase {Human (Hom | 91.38 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 91.38 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 91.32 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 91.1 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 90.97 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 90.94 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 90.92 | |
| d2bzga1 | 229 | Thiopurine S-methyltransferase {Human (Homo sapien | 90.81 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 90.63 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 90.47 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 90.47 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 90.46 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 90.44 | |
| d1jg1a_ | 215 | Protein-L-isoaspartyl O-methyltransferase {Archaeo | 90.33 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 90.17 | |
| d1ve3a1 | 226 | Hypothetical protein PH0226 {Archaeon Pyrococcus h | 90.07 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 89.88 | |
| d1b26a1 | 234 | Glutamate dehydrogenase {Thermotoga maritima [TaxI | 89.59 | |
| d2i6ga1 | 198 | Putative methyltransferase TehB {Salmonella typhim | 89.56 | |
| d2gv8a2 | 107 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 89.38 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 89.38 | |
| d1l3ia_ | 186 | Precorrin-6Y methyltransferase (CbiT) {Archaeon Me | 89.34 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 89.08 | |
| d2fyta1 | 311 | Protein arginine N-methyltransferase 3, PRMT3 {Hum | 88.75 | |
| d2as0a2 | 324 | Hypothetical protein PH1915, middle and C-terminal | 88.67 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 88.59 | |
| d2fr1a2 | 209 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 88.53 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 88.47 | |
| d2cvza2 | 156 | Hydroxyisobutyrate dehydrogenase {Thermus thermoph | 88.43 | |
| d1gtma1 | 239 | Glutamate dehydrogenase {Archaeon Pyrococcus furio | 88.33 | |
| d1byia_ | 224 | Dethiobiotin synthetase {Escherichia coli [TaxId: | 88.31 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 88.17 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 88.01 | |
| d2esra1 | 152 | Putative methyltransferase SPy1538 {Streptococcus | 87.98 | |
| d1iuka_ | 136 | Hypothetical protein TT1466 {Thermus thermophilus | 87.87 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 87.83 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 87.77 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 87.52 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 87.34 | |
| d2b78a2 | 317 | Hypothetical protein SMu776, middle and C-terminal | 87.08 | |
| d1dl5a1 | 213 | Protein-L-isoaspartyl O-methyltransferase {Thermot | 87.0 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 86.98 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 86.9 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 86.44 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 86.07 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 86.01 | |
| d1nv8a_ | 271 | N5-glutamine methyltransferase, HemK {Thermotoga m | 85.93 | |
| d1g3qa_ | 237 | Cell division regulator MinD {Archaeon Pyrococcus | 85.58 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 85.56 | |
| d1ws6a1 | 171 | Methyltransferase TTHA0928 {Thermus thermophilus [ | 85.44 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 85.37 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 85.36 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 84.98 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 84.89 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 84.87 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 84.64 | |
| d1ihua2 | 279 | Arsenite-translocating ATPase ArsA {Escherichia co | 84.42 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 84.33 | |
| d1krwa_ | 123 | NTRC receiver domain {Salmonella typhimurium [TaxI | 84.12 | |
| d1vbfa_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Sulfolo | 84.09 | |
| d1vl5a_ | 231 | Hypothetical protein BH2331 {Bacillus halodurans [ | 83.86 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 83.76 | |
| d1i1na_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Human ( | 83.39 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 83.05 | |
| d1c4oa2 | 174 | Nucleotide excision repair enzyme UvrB {Thermus th | 82.68 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 82.64 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 82.59 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 82.48 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 82.43 | |
| d2igta1 | 309 | Putative methyltransferase Atu0340 {Agrobacterium | 82.08 | |
| d1w4xa2 | 235 | Phenylacetone monooxygenase {Thermobifida fusca [T | 81.3 | |
| d1oria_ | 316 | Protein arginine N-methyltransferase 1, PRMT1 {Rat | 80.77 | |
| d1hyqa_ | 232 | Cell division regulator MinD {Archaeon Archaeoglob | 80.72 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 80.25 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 80.22 | |
| d1m1na_ | 477 | Nitrogenase iron-molybdenum protein, alpha chain { | 80.08 |
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=1.6e-56 Score=380.17 Aligned_cols=248 Identities=30% Similarity=0.376 Sum_probs=231.4
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
....+|++|++|||||++|||+++|+.|+++|++|++++|+.+.++++.+++.+.+.++.+++||++|+++++++++++.
T Consensus 3 n~~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~ 82 (251)
T d2c07a1 3 NYYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKIL 82 (251)
T ss_dssp CCCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 34578999999999999999999999999999999999999999999999999988899999999999999999999999
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCC
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW 164 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~ 164 (298)
++||++|++|||||.....++.+.+.++|++++++|+.++++++++++|+|++++ +|+||++||..+..+.+
T Consensus 83 ~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~--------~G~IVnisS~~~~~~~~ 154 (251)
T d2c07a1 83 TEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR--------YGRIINISSIVGLTGNV 154 (251)
T ss_dssp HHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT--------CEEEEEECCTHHHHCCT
T ss_pred HhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCC--------CeEEEEECCHHhcCCCC
Confidence 9999999999999998889999999999999999999999999999999999887 79999999999999999
Q ss_pred CchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhc
Q 022386 165 YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (298)
Q Consensus 165 ~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~ 244 (298)
...+|++||+|+.+|+|+++.|++ ++|||||+|+||+++|++.... .++..+.+....|++|+.+|+|+|++++||+
T Consensus 155 ~~~~Y~asKaal~~ltr~lA~el~-~~gIrVN~V~PG~v~T~~~~~~--~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~ 231 (251)
T d2c07a1 155 GQANYSSSKAGVIGFTKSLAKELA-SRNITVNAIAPGFISSDMTDKI--SEQIKKNIISNIPAGRMGTPEEVANLACFLS 231 (251)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCC-----C--CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEccCCEeccccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence 999999999999999999999998 8899999999999999865433 4667788888899999999999999999999
Q ss_pred CCCCCCccccEEEeCCCCC
Q 022386 245 SDAGKYVNGNTLIVDGGNW 263 (298)
Q Consensus 245 s~~~~~~~G~~i~~dgG~~ 263 (298)
|+.++|+||+.|.+|||.+
T Consensus 232 S~~s~~itG~~i~vDGG~s 250 (251)
T d2c07a1 232 SDKSGYINGRVFVIDGGLS 250 (251)
T ss_dssp SGGGTTCCSCEEEESTTSC
T ss_pred CchhCCCcCcEEEECCCcC
Confidence 9999999999999999954
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=1.1e-56 Score=380.92 Aligned_cols=247 Identities=34% Similarity=0.515 Sum_probs=230.1
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHh-CCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
+|+||++|||||++|||+++|+.|+++|++|++++|+.+++++..+++.+ .+.++.+++||++++++++++++++.++|
T Consensus 2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 81 (251)
T d1vl8a_ 2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF 81 (251)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 78999999999999999999999999999999999999999998888754 47789999999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc-ccCCCCc
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH-YTATWYQ 166 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~-~~~~~~~ 166 (298)
|+||+||||||+...+++.+.+.++|++.|++|+.++++++|.++|+|++++ .|+||+++|..+ ..+.+..
T Consensus 82 g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~--------~G~Ii~i~S~~~~~~~~~~~ 153 (251)
T d1vl8a_ 82 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD--------NPSIINIGSLTVEEVTMPNI 153 (251)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS--------SCEEEEECCGGGTCCCSSSC
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccc--------cccccccccchhccccCccc
Confidence 9999999999998889999999999999999999999999999999999876 789999999766 4467778
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
.+|++||+|+.+|+++++.|++ ++|||||+|+||+++|++......+++..+.+....|++|+.+|+|+|++++||+|+
T Consensus 154 ~~Y~asKaal~~lt~~lA~e~~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~ 232 (251)
T d1vl8a_ 154 SAYAASKGGVASLTKALAKEWG-RYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASE 232 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSG
T ss_pred cchHHHHHhHHHHHHHHHHHhc-ccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence 9999999999999999999998 889999999999999998766656677778888899999999999999999999999
Q ss_pred CCCCccccEEEeCCCCCC
Q 022386 247 AGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 247 ~~~~~~G~~i~~dgG~~~ 264 (298)
.++|+||++|.+|||++.
T Consensus 233 ~a~~itG~~i~vDGG~ta 250 (251)
T d1vl8a_ 233 EAKYVTGQIIFVDGGWTA 250 (251)
T ss_dssp GGTTCCSCEEEESTTGGG
T ss_pred hhCCCcCcEEEeCcCeeC
Confidence 999999999999999763
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.4e-56 Score=379.71 Aligned_cols=246 Identities=32% Similarity=0.491 Sum_probs=230.7
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.+.|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++++.+.++.+++||++++++++++++++.++
T Consensus 6 ~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~ 85 (255)
T d1fmca_ 6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK 85 (255)
T ss_dssp GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 34689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
||++|++|||||+....++ +.+.++|++++++|+.++++++|.++|+|.+++ +|+||++||..+..+.+..
T Consensus 86 ~g~iDilvnnAG~~~~~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~--------~g~Ii~isS~~~~~~~~~~ 156 (255)
T d1fmca_ 86 LGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG--------GGVILTITSMAAENKNINM 156 (255)
T ss_dssp HSSCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTCCCTTC
T ss_pred cCCCCEeeeCCcCCCCCcc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccc--------ccccccccccchhcccccc
Confidence 9999999999998776665 789999999999999999999999999999987 7899999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
.+|++||+|+.+|+|+++.|++ ++|||||+|+||+++|++..... +++..+.+.+..|++|+.+|+|+|++++||+|+
T Consensus 157 ~~Y~asKaal~~lt~~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~-~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~ 234 (255)
T d1fmca_ 157 TSYASSKAAASHLVRNMAFDLG-EKNIRVNGIAPGAILTDALKSVI-TPEIEQKMLQHTPIRRLGQPQDIANAALFLCSP 234 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-TTTEEEEEEEECSBCSHHHHTTC-CHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSG
T ss_pred ccchhHHHHHHHHHHHHHHHhC-ccCeEEEEeeeCcCcChHhhccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 9999999999999999999998 88999999999999998765544 456677788889999999999999999999999
Q ss_pred CCCCccccEEEeCCCCC
Q 022386 247 AGKYVNGNTLIVDGGNW 263 (298)
Q Consensus 247 ~~~~~~G~~i~~dgG~~ 263 (298)
.++|+||+.|.+|||..
T Consensus 235 ~s~~itG~~i~vDGG~~ 251 (255)
T d1fmca_ 235 AASWVSGQILTVSGGGV 251 (255)
T ss_dssp GGTTCCSCEEEESTTSC
T ss_pred hhcCCcCCEEEECcCcc
Confidence 99999999999999963
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=100.00 E-value=1.5e-56 Score=382.13 Aligned_cols=250 Identities=32% Similarity=0.499 Sum_probs=233.4
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh-hHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK-TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.+|+||++|||||++|||+++|++|+++|++|++++|+. +.++++.+++++.+.++.+++||++|+++++++++++.++
T Consensus 3 ~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~ 82 (261)
T d1geea_ 3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE 82 (261)
T ss_dssp GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 379999999999999999999999999999999999985 4678888999998889999999999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
||+||+||||||+....++.+.+.++|++.+++|+.++++++|+++|+|.+++. +++||++||..+..+.+..
T Consensus 83 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~-------g~~Iv~isS~~~~~~~~~~ 155 (261)
T d1geea_ 83 FGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDI-------KGTVINMSSVHEKIPWPLF 155 (261)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC-------CCEEEEECCGGGTSCCTTC
T ss_pred hCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccc-------cccccccccchhcccCccc
Confidence 999999999999988889999999999999999999999999999999988752 4569999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
.+|++||+|+.+|+++++.|++ ++|||||+|+||+++|++......+++..+.+....|++|+.+|+|+|++++||+|+
T Consensus 156 ~~Y~asKaal~~lt~~lA~e~~-~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~ 234 (261)
T d1geea_ 156 VHYAASKGGMKLMTETLALEYA-PKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASS 234 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSG
T ss_pred cccccCCccchhhHHHHHHHhh-hhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence 9999999999999999999998 889999999999999987665555567778888899999999999999999999999
Q ss_pred CCCCccccEEEeCCCCCCC
Q 022386 247 AGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 247 ~~~~~~G~~i~~dgG~~~~ 265 (298)
.++|+||+.|.+|||+++.
T Consensus 235 ~s~~itG~~i~vDGG~sl~ 253 (261)
T d1geea_ 235 EASYVTGITLFADGGMTLY 253 (261)
T ss_dssp GGTTCCSCEEEESTTGGGC
T ss_pred hhcCCcCCeEEECCCeeCC
Confidence 9999999999999999884
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.2e-56 Score=377.40 Aligned_cols=242 Identities=28% Similarity=0.356 Sum_probs=226.1
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
||+||+++||||++|||+++|++|+++|++|++++|+.+.++++.+++. .++.++.||++++++++++++++.++||
T Consensus 1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 77 (243)
T d1q7ba_ 1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG---ANGKGLMLNVTDPASIESVLEKIRAEFG 77 (243)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG---GGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC---CCCcEEEEEecCHHHhhhhhhhhhcccC
Confidence 6899999999999999999999999999999999999998888888774 4578899999999999999999999999
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchh
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~ 168 (298)
++|++|||||....+++.+.+.++|++.+++|+.++++++|+++|+|++++ +|+||++||..+..+.+...+
T Consensus 78 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~--------~G~II~isS~~~~~~~~~~~~ 149 (243)
T d1q7ba_ 78 EVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKR--------HGRIITIGSVVGTMGNGGQAN 149 (243)
T ss_dssp SCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCHHHHHCCTTCHH
T ss_pred CcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcC--------CCEeeeecchhhcCCCCCCHH
Confidence 999999999998889999999999999999999999999999999999876 799999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCC
Q 022386 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (298)
Q Consensus 169 Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~ 248 (298)
|++||+|+.+|+++++.|++ ++|||||+|+||+++|++.... .++..+.+....|++|+.+|+|+|+++.||+|+.+
T Consensus 150 Y~asKaal~~lt~~lA~ela-~~gIrVN~I~PG~i~T~~~~~~--~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s 226 (243)
T d1q7ba_ 150 YAAAKAGLIGFSKSLAREVA-SRGITVNVVAPGFIETDMTRAL--SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEA 226 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHTS--CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHHHHHhC-ccCeEEEEEecceEechhhhhh--hhhHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchh
Confidence 99999999999999999998 8899999999999999865443 24456677788999999999999999999999999
Q ss_pred CCccccEEEeCCCCCC
Q 022386 249 KYVNGNTLIVDGGNWL 264 (298)
Q Consensus 249 ~~~~G~~i~~dgG~~~ 264 (298)
+++|||.|.+|||.++
T Consensus 227 ~~itGq~i~vdGG~~~ 242 (243)
T d1q7ba_ 227 AYITGETLHVNGGMYM 242 (243)
T ss_dssp TTCCSCEEEESTTSSC
T ss_pred cCCcCCeEEECCCeEe
Confidence 9999999999999765
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=100.00 E-value=7.7e-56 Score=377.60 Aligned_cols=250 Identities=30% Similarity=0.427 Sum_probs=232.6
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
..+|+||++|||||++|||+++|+.|+++|++|++++|+.++++++.+++.+.+.++.+++||++++++++++++++.++
T Consensus 3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 82 (259)
T d2ae2a_ 3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH 82 (259)
T ss_dssp TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence 35899999999999999999999999999999999999999999999999998889999999999999999999999999
Q ss_pred hC-CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC
Q 022386 87 FG-KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (298)
Q Consensus 87 ~~-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~ 165 (298)
|+ ++|++|||||+....++.+.+.++|++++++|+.+++++++.++|+|++++ .|+||+++|..+..+.+.
T Consensus 83 ~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~--------~G~Ii~isS~~~~~~~~~ 154 (259)
T d2ae2a_ 83 FHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE--------RGNVVFISSVSGALAVPY 154 (259)
T ss_dssp TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS--------SEEEEEECCGGGTSCCTT
T ss_pred hCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhc--------cccccccccccccccccc
Confidence 87 899999999998888999999999999999999999999999999999876 799999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCCh---HHHHHHHhhhccCCCCCCHHHHHHHHHH
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP---EEIRSKATDYMAAYKFGEKWDIAMAALY 242 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~~~~ 242 (298)
...|++||+|+.+|+|+++.|++ ++|||||+|+||+++|++....... ++..+.+....|++|+.+|+|+|++++|
T Consensus 155 ~~~Y~asKaal~~lt~~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~f 233 (259)
T d2ae2a_ 155 EAVYGATKGAMDQLTRCLAFEWA-KDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAF 233 (259)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHhC-cCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 99999999999999999999998 8899999999999999875443332 3445666778999999999999999999
Q ss_pred hcCCCCCCccccEEEeCCCCCCC
Q 022386 243 LASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 243 L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
|+|+.++|+||+.|.+|||.+..
T Consensus 234 L~S~~s~~itG~~i~VDGG~~a~ 256 (259)
T d2ae2a_ 234 LCFPAASYVTGQIIYVDGGLMAN 256 (259)
T ss_dssp HHSGGGTTCCSCEEEESTTGGGC
T ss_pred HhCchhCCCcCcEEEECCCeEee
Confidence 99999999999999999998763
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=100.00 E-value=8.3e-56 Score=374.84 Aligned_cols=246 Identities=31% Similarity=0.411 Sum_probs=213.6
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
+.|+||++|||||++|||+++|+.|+++|++|++++|+..+ +..+.+++.+.++.+++||++|+++++++++++.++|
T Consensus 1 qrL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~--~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~ 78 (247)
T d2ew8a1 1 QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF 78 (247)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH--HHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999999999999999998653 4445667778899999999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
|++|+||||||+....++.+.+.++|++.|++|+.++++++|+++|+|++++ +|+||+++|..+..+.+...
T Consensus 79 G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~--------~G~Iv~isS~~~~~~~~~~~ 150 (247)
T d2ew8a1 79 GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG--------WGRIINLTSTTYWLKIEAYT 150 (247)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGGSCCSSCH
T ss_pred CCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcC--------CCCccccccchhcccCcccc
Confidence 9999999999998889999999999999999999999999999999999986 79999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~ 247 (298)
.|++||+|+.+|+++++.|++ ++|||||+|+||+++|++.......+..........+.+|+.+|+|+|++++||+|+.
T Consensus 151 ~Y~asKaal~~ltk~lA~ela-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pedvA~~v~fL~S~~ 229 (247)
T d2ew8a1 151 HYISTKAANIGFTRALASDLG-KDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDD 229 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHHHHHHHTSGG
T ss_pred cchhhhccHHHHHHHHHHHhc-ccCeEEEEEeeCCCCCccccccccchhHHHHHHHhccCCCCCCHHHHHHHHHHHhCch
Confidence 999999999999999999998 8899999999999999876554433333233334458899999999999999999999
Q ss_pred CCCccccEEEeCCCCCC
Q 022386 248 GKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 248 ~~~~~G~~i~~dgG~~~ 264 (298)
++|+||++|.+|||.+.
T Consensus 230 s~~itG~~i~vDGG~~~ 246 (247)
T d2ew8a1 230 ASFITGQTLAVDGGMVR 246 (247)
T ss_dssp GTTCCSCEEEESSSCCC
T ss_pred hcCCcCCeEEECCCEec
Confidence 99999999999999753
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=2.4e-56 Score=380.56 Aligned_cols=250 Identities=27% Similarity=0.383 Sum_probs=201.4
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
.+|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+.++.++.||++++++++++++++.++|
T Consensus 4 F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 83 (259)
T d1xq1a_ 4 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF 83 (259)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHh
Confidence 47899999999999999999999999999999999999999999999999988899999999999999999999999998
Q ss_pred -CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 88 -GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 88 -~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
|++|++|||||+....++.+.+.++|++++++|+.++++++|+++|+|++++ .|+||++||..+..+.+..
T Consensus 84 ~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~--------~G~Iv~isS~~~~~~~~~~ 155 (259)
T d1xq1a_ 84 GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG--------CGNIIFMSSIAGVVSASVG 155 (259)
T ss_dssp TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--------SCEEEEEC----------C
T ss_pred CCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccc--------ccccccccccccccccccc
Confidence 6899999999998889999999999999999999999999999999999876 7999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
..|++||+|+.+|+++++.|++ ++|||||+|+||+++|++.... ..++..+......|++|+.+|+|+|++++||+|+
T Consensus 156 ~~Y~asKaal~~lt~~lA~e~~-~~gIrVN~V~PG~i~T~~~~~~-~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~ 233 (259)
T d1xq1a_ 156 SIYSATKGALNQLARNLACEWA-SDGIRANAVAPAVIATPLAEAV-YDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMP 233 (259)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEECCSCC--------------------------CCGGGGHHHHHHHTSG
T ss_pred ccccccccchhhhhHHHHHHhc-ccCeEEEEeccCcccCHHhhhh-chHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCc
Confidence 9999999999999999999998 8899999999999999875443 3455566777888999999999999999999999
Q ss_pred CCCCccccEEEeCCCCCCCCC
Q 022386 247 AGKYVNGNTLIVDGGNWLSNP 267 (298)
Q Consensus 247 ~~~~~~G~~i~~dgG~~~~~~ 267 (298)
.++|+||+.|.+|||.++..-
T Consensus 234 ~s~~iTG~~i~vDGG~s~~g~ 254 (259)
T d1xq1a_ 234 AASYITGQTICVDGGLTVNGF 254 (259)
T ss_dssp GGTTCCSCEEECCCCEEETTE
T ss_pred hhcCCcCcEEEeCCCEECCCC
Confidence 999999999999999988643
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=100.00 E-value=1.8e-55 Score=375.90 Aligned_cols=247 Identities=30% Similarity=0.396 Sum_probs=219.8
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCC-hhHHHHHHHHHHh-CCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~-~~~~~~~~~~~~~-~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.|+||++|||||++|||+++|++|+++|++|++++|+ .+.++++.+++.+ .+.++.+++||++|+++++++++++.++
T Consensus 1 ~L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (260)
T d1x1ta1 1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ 80 (260)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred CCCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4899999999999999999999999999999999997 4567777777755 4678999999999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
||++|+||||||+...+++.+.+.++|++.|++|+.++++++++++|+|++++ .|+||+++|..+..+.+..
T Consensus 81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~--------~G~Iv~isS~~~~~~~~~~ 152 (260)
T d1x1ta1 81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG--------FGRIINIASAHGLVASANK 152 (260)
T ss_dssp HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCTTC
T ss_pred hCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcC--------CceEeecccccceeccCCc
Confidence 99999999999998889999999999999999999999999999999999986 7999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC----------hHHHHHHHhhhccCCCCCCHHHH
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA----------PEEIRSKATDYMAAYKFGEKWDI 236 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~dv 236 (298)
..|++||+|+.+|+++++.|++ ++|||||+|+||+++|++...... .+...+.+....|++|+.+|+|+
T Consensus 153 ~~Y~asKaal~~lt~~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedi 231 (260)
T d1x1ta1 153 SAYVAAKHGVVGFTKVTALETA-GQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQL 231 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHH
T ss_pred chhhhhhhhHHHhHHHHHHHhc-hhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHH
Confidence 9999999999999999999998 889999999999999987543321 12223446678899999999999
Q ss_pred HHHHHHhcCCCCCCccccEEEeCCCCCC
Q 022386 237 AMAALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 237 a~~~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
|++++||+|+.++|+||+.|.+|||++.
T Consensus 232 A~~v~fL~S~~a~~itG~~i~vDGG~ta 259 (260)
T d1x1ta1 232 GGTAVFLASDAAAQITGTTVSVDGGWTA 259 (260)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHHHHHhChhhCCCcCCEEEECcchhc
Confidence 9999999999999999999999999764
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=100.00 E-value=2.4e-55 Score=374.11 Aligned_cols=248 Identities=28% Similarity=0.436 Sum_probs=227.8
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC--CCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+. +.++.+++||++|+++++++++++.++
T Consensus 1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~ 80 (258)
T d1iy8a_ 1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER 80 (258)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence 379999999999999999999999999999999999999999988888664 457889999999999999999999999
Q ss_pred hCCccEEEECCCCC-CCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC
Q 022386 87 FGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (298)
Q Consensus 87 ~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~ 165 (298)
||++|+||||||+. ..+++.+.+.++|+++|++|+.++++++|+++|+|++++ +|+||+++|..+..+.+.
T Consensus 81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~--------~G~Ii~isS~~~~~~~~~ 152 (258)
T d1iy8a_ 81 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG--------SGMVVNTASVGGIRGIGN 152 (258)
T ss_dssp HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CCEEEEECCGGGTSBCSS
T ss_pred hCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhc--------CCCCcccccHhhccCCCC
Confidence 99999999999975 457788899999999999999999999999999999876 799999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc------CChHHHHHHHhhhccCCCCCCHHHHHHH
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK------LAPEEIRSKATDYMAAYKFGEKWDIAMA 239 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (298)
...|++||+|+.+|+++++.|++ ++|||||+|+||+++|++.... ...++..+.+....|++|+.+|+|+|+.
T Consensus 153 ~~~Y~asKaal~~lt~~lA~el~-~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~ 231 (258)
T d1iy8a_ 153 QSGYAAAKHGVVGLTRNSAVEYG-RYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAV 231 (258)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhC-ccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 99999999999999999999998 8899999999999999864322 2345566777888999999999999999
Q ss_pred HHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 240 ALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 240 ~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
++||+|+.++|+||++|.+|||.+..
T Consensus 232 v~fL~S~~s~~itG~~i~VDGG~saa 257 (258)
T d1iy8a_ 232 VAFLLSDDASYVNATVVPIDGGQSAA 257 (258)
T ss_dssp HHHHTSGGGTTCCSCEEEESTTTTTB
T ss_pred HHHHhCchhcCCcCceEEcCcchhcc
Confidence 99999999999999999999998753
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=100.00 E-value=3.8e-55 Score=372.81 Aligned_cols=246 Identities=31% Similarity=0.431 Sum_probs=225.7
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
.|+||+++||||++|||+++|+.|+++|++|++++|+.+.++++.+++ +.++.+++||++++++++++++++.++||
T Consensus 2 ~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~---~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g 78 (256)
T d1k2wa_ 2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI---GPAACAIALDVTDQASIDRCVAELLDRWG 78 (256)
T ss_dssp TTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCceEEEEeeCCCHHHHHHHHHHHHHHhC
Confidence 489999999999999999999999999999999999998888877766 67799999999999999999999999999
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchh
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~ 168 (298)
++|++|||||+...+++.+.+.++|++.+++|+.++++++++++|.|.++.. +|+||++||..+..+.+....
T Consensus 79 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~-------~g~Iv~isS~~~~~~~~~~~~ 151 (256)
T d1k2wa_ 79 SIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGR-------GGKIINMASQAGRRGEALVGV 151 (256)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-------CEEEEEECCGGGTSCCTTCHH
T ss_pred CccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhcc-------CCccccccchhhccccccccc
Confidence 9999999999988899999999999999999999999999999998766432 699999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc---------CChHHHHHHHhhhccCCCCCCHHHHHHH
Q 022386 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK---------LAPEEIRSKATDYMAAYKFGEKWDIAMA 239 (298)
Q Consensus 169 Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (298)
|++||+|+.+|+++++.|++ ++|||||+|+||+++|++.... ...++..+.+....|++|+.+|+|+|++
T Consensus 152 Y~asKaal~~lt~~lA~el~-~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~ 230 (256)
T d1k2wa_ 152 YCATKAAVISLTQSAGLNLI-RHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGM 230 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHH
T ss_pred hhhhhhHHHHHHHHHHHHhc-ccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 99999999999999999998 8899999999999999864321 2334556677788999999999999999
Q ss_pred HHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 240 ALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 240 ~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
++||+|+.++|+||+.|.+|||.+++
T Consensus 231 v~fL~S~~a~~iTG~~i~vDGG~~ms 256 (256)
T d1k2wa_ 231 AIFLATPEADYIVAQTYNVDGGNWMS 256 (256)
T ss_dssp HHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred HHHHhCchhCCccCceEEECcchhhC
Confidence 99999999999999999999998873
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=2.2e-55 Score=374.76 Aligned_cols=244 Identities=29% Similarity=0.394 Sum_probs=228.3
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.+.+.++.+++||++|+++++++++++.++||+|
T Consensus 1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i 80 (257)
T d2rhca1 1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV 80 (257)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHH--HHhcCCCCCCCCCCcEEEEecccccccCCCCchh
Q 022386 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY--LKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (298)
Q Consensus 91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~ 168 (298)
|+||||||+...+++.+.+.++|++++++|+.++++++|+++|+ |.+++ .|+||+++|..+..+.+....
T Consensus 81 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~--------~g~Ii~i~S~~~~~~~~~~~~ 152 (257)
T d2rhca1 81 DVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG--------TGRIVNIASTGGKQGVVHAAP 152 (257)
T ss_dssp SEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHT--------EEEEEEECCGGGTSCCTTCHH
T ss_pred CEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcC--------Ccccccccccccccccccchh
Confidence 99999999988899999999999999999999999999999997 45554 689999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccC---------cCChHHHHHHHhhhccCCCCCCHHHHHHH
Q 022386 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS---------KLAPEEIRSKATDYMAAYKFGEKWDIAMA 239 (298)
Q Consensus 169 Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (298)
|++||+|+.+|+|+++.|++ ++|||||+|+||+++|++... ...+++..+.+....|++|+.+|+|+|++
T Consensus 153 Y~asKaal~~ltk~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~~ 231 (257)
T d2rhca1 153 YSASKHGVVGFTKALGLELA-RTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEM 231 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-TSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhh-hhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 99999999999999999998 889999999999999986432 23456777888889999999999999999
Q ss_pred HHHhcCCCCCCccccEEEeCCCCC
Q 022386 240 ALYLASDAGKYVNGNTLIVDGGNW 263 (298)
Q Consensus 240 ~~~L~s~~~~~~~G~~i~~dgG~~ 263 (298)
++||+|+.++|+||+.|.+|||.+
T Consensus 232 v~fL~S~~s~~itG~~i~vDGG~~ 255 (257)
T d2rhca1 232 VAYLIGPGAAAVTAQALNVCGGLG 255 (257)
T ss_dssp HHHHTSGGGTTCCSCEEEESTTCC
T ss_pred HHHHhCchhcCCcCceEEECcCcc
Confidence 999999999999999999999964
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=100.00 E-value=3.2e-55 Score=374.08 Aligned_cols=244 Identities=26% Similarity=0.435 Sum_probs=228.5
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
.|+||++|||||++|||+++|+.|+++|++|++++|+.+.++++.+++.+.+.++.++.||++++++++++++++.++||
T Consensus 2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (260)
T d1zema1 2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG 81 (260)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccEEEECCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 89 KLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 89 ~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
++|++|||||... ..++.+.+.++|++.+++|+.++++++++++|+|.+++ .|+||++||..+..+.+...
T Consensus 82 ~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~--------~G~II~isS~~~~~~~~~~~ 153 (260)
T d1zema1 82 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN--------YGRIVNTASMAGVKGPPNMA 153 (260)
T ss_dssp CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCHHHHSCCTTBH
T ss_pred CCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhc--------CCCCCeeechhhccCCcchH
Confidence 9999999999764 47899999999999999999999999999999999876 79999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccC--------------cCChHHHHHHHhhhccCCCCCCH
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS--------------KLAPEEIRSKATDYMAAYKFGEK 233 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~ 233 (298)
.|++||+|+.+|+|+++.|++ ++|||||+|+||+|+|++... ...++...+.+....|++|+.+|
T Consensus 154 ~Y~asKaal~~ltk~lA~el~-~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~p 232 (260)
T d1zema1 154 AYGTSKGAIIALTETAALDLA-PYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDI 232 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCG
T ss_pred HHHHHHHHHHHHHHHHHHHhh-hhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCCCcCH
Confidence 999999999999999999998 889999999999999985321 22346666778888999999999
Q ss_pred HHHHHHHHHhcCCCCCCccccEEEeCCC
Q 022386 234 WDIAMAALYLASDAGKYVNGNTLIVDGG 261 (298)
Q Consensus 234 ~dva~~~~~L~s~~~~~~~G~~i~~dgG 261 (298)
+|+|++++||+|+.++|+||+.|.+|||
T Consensus 233 edvA~~v~fL~S~~s~~itG~~i~VDGG 260 (260)
T d1zema1 233 NEIPGVVAFLLGDDSSFMTGVNLPIAGG 260 (260)
T ss_dssp GGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred HHHHHHHHHHhCchhcCccCCeEEeCCC
Confidence 9999999999999999999999999998
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=100.00 E-value=1.2e-54 Score=368.64 Aligned_cols=246 Identities=28% Similarity=0.392 Sum_probs=225.2
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
.|+||++|||||++|||+++|+.|+++|++|++++|+.+.++++.+++.. +.++.+++||++|+++++++++++.++||
T Consensus 3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 81 (251)
T d1zk4a1 3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT-PDQIQFFQHDSSDEDGWTKLFDATEKAFG 81 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC-CCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 38999999999999999999999999999999999999999888888854 56799999999999999999999999999
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchh
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~ 168 (298)
++|+||||||+...+++.+.+.++|+++|++|+.++++++++++|+|++++. +|+||+++|..+..+.+....
T Consensus 82 ~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~-------gg~Ii~isS~~~~~~~~~~~~ 154 (251)
T d1zk4a1 82 PVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGL-------GASIINMSSIEGFVGDPSLGA 154 (251)
T ss_dssp SCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSS-------CEEEEEECCGGGTSCCTTCHH
T ss_pred CceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCC-------CCceEeeeccceeccCCCchh
Confidence 9999999999988899999999999999999999999999999999998752 468999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHH--hcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 169 VSAAKAAVDSITRSLALE--WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 169 Y~~sK~a~~~l~~~la~e--~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
|++||+|+.+|+++++.| ++ ++|||||+|+||+++|++..... .++.........|++|+.+|+|+|++++||+|+
T Consensus 155 Y~asKaal~~lt~~lA~e~~l~-~~gIrVN~I~PG~i~T~~~~~~~-~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~ 232 (251)
T d1zk4a1 155 YNASKGAVRIMSKSAALDCALK-DYDVRVNTVHPGYIKTPLVDDLP-GAEEAMSQRTKTPMGHIGEPNDIAYICVYLASN 232 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEEEECCBCCHHHHTST-THHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHhcchHHHHHHHhcC-CCcEEEEEEeCCCCCChhHHhcC-CHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCc
Confidence 999999999999999998 45 78999999999999998765543 344445556678999999999999999999999
Q ss_pred CCCCccccEEEeCCCCCC
Q 022386 247 AGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 247 ~~~~~~G~~i~~dgG~~~ 264 (298)
.++|+||+.|.+|||++.
T Consensus 233 ~s~~itG~~i~vDGG~ta 250 (251)
T d1zk4a1 233 ESKFATGSEFVVDGGYTA 250 (251)
T ss_dssp GGTTCCSCEEEESTTGGG
T ss_pred hhCCCcCcEEEECccccc
Confidence 999999999999999764
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1.9e-54 Score=365.23 Aligned_cols=241 Identities=29% Similarity=0.409 Sum_probs=220.1
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
+.|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++ ++.++.||++|+++++++++++.++|
T Consensus 1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~ 75 (242)
T d1ulsa_ 1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-----GAHPVVMDVADPASVERGFAEALAHL 75 (242)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHHHHhc
Confidence 3589999999999999999999999999999999999988877766544 36788999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
|++|+||||||+...+++.+.+.++|++.+++|+.++++++|+++|+|++++ .+.++++||. +..+.+...
T Consensus 76 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~--------~~~i~~~ss~-~~~~~~~~~ 146 (242)
T d1ulsa_ 76 GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN--------PGSIVLTASR-VYLGNLGQA 146 (242)
T ss_dssp SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC--------CEEEEEECCG-GGGCCTTCH
T ss_pred CCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccc--------cceeeeeccc-cccCCCCCc
Confidence 9999999999998889999999999999999999999999999999999876 5777777664 667888899
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~ 247 (298)
+|++||+|+.+|+|+++.|++ ++|||||+|+||+++|++... .+++..+......|++|+.+|+|+|++++||+|+.
T Consensus 147 ~Y~asKaal~~ltk~lA~ela-~~gIrVN~I~PG~v~T~~~~~--~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~ 223 (242)
T d1ulsa_ 147 NYAASMAGVVGLTRTLALELG-RWGIRVNTLAPGFIETRMTAK--VPEKVREKAIAATPLGRAGKPLEVAYAALFLLSDE 223 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCTTTSS--SCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred chHHHHHHHHHHHHHHHHHHh-hhCcEEEEEeeCcccChhhhc--CCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhchh
Confidence 999999999999999999998 889999999999999987543 34666778888899999999999999999999999
Q ss_pred CCCccccEEEeCCCCCCC
Q 022386 248 GKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 248 ~~~~~G~~i~~dgG~~~~ 265 (298)
++|+||+.|.+|||+++.
T Consensus 224 s~~itG~~i~vDGG~t~g 241 (242)
T d1ulsa_ 224 SSFITGQVLFVDGGRTIG 241 (242)
T ss_dssp GTTCCSCEEEESTTTTTT
T ss_pred hCCCCCcEEEECCCccCC
Confidence 999999999999999873
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=100.00 E-value=1e-54 Score=367.32 Aligned_cols=241 Identities=27% Similarity=0.395 Sum_probs=225.1
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEE-cCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
+++|||||++|||+++|++|+++|++|++. .|+.+.++++.+++.+.+.++.+++||++|+++++++++++.++||++|
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 81 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID 81 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 589999999999999999999999999986 5667788889999988888999999999999999999999999999999
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHH
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSA 171 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~ 171 (298)
+||||||.....++.+.+.++|++.+++|+.++++++|+++|+|++++ +|+||++||..+..+.+....|++
T Consensus 82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~--------~G~IVnisS~~~~~~~~~~~~Y~a 153 (244)
T d1edoa_ 82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR--------KGRIINIASVVGLIGNIGQANYAA 153 (244)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCTHHHHCCTTCHHHHH
T ss_pred ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcC--------CcEEEEEcChhhcCCCCCCHHHHH
Confidence 999999998889999999999999999999999999999999999876 799999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhc-CCCCCC
Q 022386 172 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA-SDAGKY 250 (298)
Q Consensus 172 sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~-s~~~~~ 250 (298)
||+|+.+|+++++.|++ ++|||||+|+||+++|++.... .++..+......|++|+.+|+|+|+++.||+ |+.++|
T Consensus 154 sKaal~~ltk~lA~el~-~~gIrvN~I~PG~i~T~~~~~~--~~~~~~~~~~~~pl~R~~~p~dvA~~v~fLa~S~~a~~ 230 (244)
T d1edoa_ 154 AKAGVIGFSKTAAREGA-SRNINVNVVCPGFIASDMTAKL--GEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASY 230 (244)
T ss_dssp HHHHHHHHHHHHHHHHH-TTTEEEEEEEECSBCSHHHHTT--CHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGG
T ss_pred HHHHHHHChHHHHHHHh-hhCcEEEEEecceeccHHHHHh--hHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHCCchhcC
Confidence 99999999999999998 8899999999999999865432 4566777888899999999999999999996 899999
Q ss_pred ccccEEEeCCCCCC
Q 022386 251 VNGNTLIVDGGNWL 264 (298)
Q Consensus 251 ~~G~~i~~dgG~~~ 264 (298)
+||++|.+|||.++
T Consensus 231 itG~~i~vdGG~si 244 (244)
T d1edoa_ 231 ITGQAFTIDGGIAI 244 (244)
T ss_dssp CCSCEEEESTTTTC
T ss_pred CcCCeEEeCCCeeC
Confidence 99999999999874
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=100.00 E-value=1.8e-54 Score=368.59 Aligned_cols=244 Identities=29% Similarity=0.398 Sum_probs=225.6
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+.++.+++||++|+++++++++++.++||++|+
T Consensus 2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 81 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV 81 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHHH
Q 022386 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 172 (298)
Q Consensus 93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~s 172 (298)
||||||+...+++.+.+.++|++.+++|+.++++++|+++|+|.+++. +++||++||..+..+.+....|++|
T Consensus 82 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~-------~g~Iv~isS~~~~~~~~~~~~Y~as 154 (255)
T d1gega_ 82 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGH-------GGKIINACSQAGHVGNPELAVYSSS 154 (255)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-------CEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred EEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhcc-------ccccccccchhhcccCcccccchhC
Confidence 999999988899999999999999999999999999999998877642 6889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc---------CChHHHHHHHhhhccCCCCCCHHHHHHHHHHh
Q 022386 173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK---------LAPEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (298)
Q Consensus 173 K~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L 243 (298)
|+|+.+|+++++.|++ ++|||||+|+||+++|++.... ...++..+.+....|++|+.+|+|+|++++||
T Consensus 155 Kaal~~ltk~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL 233 (255)
T d1gega_ 155 KFAVRGLTQTAARDLA-PLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYL 233 (255)
T ss_dssp HHHHHHHHHHHHHHHG-GGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHhh-hhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 9999999999999998 8899999999999999764322 12234455667788999999999999999999
Q ss_pred cCCCCCCccccEEEeCCCCCC
Q 022386 244 ASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 244 ~s~~~~~~~G~~i~~dgG~~~ 264 (298)
+|+.++|+||+.|.+|||..+
T Consensus 234 ~S~~a~~itG~~i~vDGG~~~ 254 (255)
T d1gega_ 234 ASPDSDYMTGQSLLIDGGMVF 254 (255)
T ss_dssp HSGGGTTCCSCEEEESSSSSC
T ss_pred hCchhCCccCcEEEecCCEEe
Confidence 999999999999999999754
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1e-54 Score=367.95 Aligned_cols=243 Identities=31% Similarity=0.444 Sum_probs=217.8
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
..|+||++|||||++|||+++|+.|+++|++|++++|+.+.. +..+.+ ...+++||++|+++++++++++.++|
T Consensus 1 g~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~-~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~ 74 (248)
T d2d1ya1 1 GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK-EVAEAI-----GGAFFQVDLEDERERVRFVEEAAYAL 74 (248)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHH-HHHHHH-----TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHc-----CCeEEEEeCCCHHHHHHHHHHHHHhc
Confidence 368999999999999999999999999999999999997653 333333 24578999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
|+||+||||||+...+++.+.+.++|++.+++|+.++++++|+++|+|++++ +|+||+++|..+..+.+...
T Consensus 75 G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~--------~G~Ii~isS~~~~~~~~~~~ 146 (248)
T d2d1ya1 75 GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG--------GGAIVNVASVQGLFAEQENA 146 (248)
T ss_dssp SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT--------CEEEEEECCGGGTSBCTTBH
T ss_pred CCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccc--------cccccccccccccccccccc
Confidence 9999999999998889999999999999999999999999999999999876 79999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC----ChHHHHHHHhhhccCCCCCCHHHHHHHHHHh
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL----APEEIRSKATDYMAAYKFGEKWDIAMAALYL 243 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L 243 (298)
.|++||+|+.+|+++++.|++ ++|||||+|+||+++|++..... .+++..+......|++|+.+|+|+|+.++||
T Consensus 147 ~Y~asKaal~~ltk~lA~el~-~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL 225 (248)
T d2d1ya1 147 AYNASKGGLVNLTRSLALDLA-PLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFL 225 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhh-hhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 999999999999999999998 88999999999999998654322 2344556677788999999999999999999
Q ss_pred cCCCCCCccccEEEeCCCCCCC
Q 022386 244 ASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 244 ~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
+|+.++|+||+.|.+|||.+.+
T Consensus 226 ~S~~s~~itG~~i~vDGG~tas 247 (248)
T d2d1ya1 226 ASEKASFITGAILPVDGGMTAS 247 (248)
T ss_dssp HSGGGTTCCSCEEEESTTGGGB
T ss_pred hCchhcCCCCcEEEcCcCcccc
Confidence 9999999999999999998754
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=2.5e-54 Score=364.39 Aligned_cols=240 Identities=30% Similarity=0.363 Sum_probs=221.1
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
+.|+||++|||||++|||+++|+.|+++|++|++++|+.++++++.+++. .++.+++||++|+++++++++++.++|
T Consensus 2 G~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 78 (244)
T d1nffa_ 2 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA---DAARYVHLDVTQPAQWKAAVDTAVTAF 78 (244)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG---GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh---CcceEEEeecCCHHHHHHHHHHHHHHh
Confidence 46899999999999999999999999999999999999988887777663 468889999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
+++|++|||||.....++.+.+.++|+++|++|+.++++++|.+.|+|++++ +|+||++||..+..+.+...
T Consensus 79 g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~--------~G~Ii~isS~~~~~~~~~~~ 150 (244)
T d1nffa_ 79 GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG--------RGSIINISSIEGLAGTVACH 150 (244)
T ss_dssp SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCTTBH
T ss_pred CCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcC--------cceEEecccccccccccccc
Confidence 9999999999998889999999999999999999999999999999999876 79999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~ 247 (298)
.|++||+|+.+|+|+++.|++ ++|||||+|+||+++|++.... . + .....|++|+.+|+|+|++++||+|+.
T Consensus 151 ~Y~asKaal~~ltk~lA~el~-~~gIrVN~I~PG~i~T~~~~~~-~-~-----~~~~~pl~R~~~p~diA~~v~fL~s~~ 222 (244)
T d1nffa_ 151 GYTATKFAVRGLTKSTALELG-PSGIRVNSIHPGLVKTPMTDWV-P-E-----DIFQTALGRAAEPVEVSNLVVYLASDE 222 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCSGGGTTS-C-T-----TCSCCSSSSCBCHHHHHHHHHHHHSGG
T ss_pred chhhHHHHHHHHHHHHHHHhc-ccCEEEEEEeeCCccChhHhhh-h-H-----HHHhccccCCCCHHHHHHHHHHHhChh
Confidence 999999999999999999998 8899999999999999865332 1 1 123478999999999999999999999
Q ss_pred CCCccccEEEeCCCCCCCC
Q 022386 248 GKYVNGNTLIVDGGNWLSN 266 (298)
Q Consensus 248 ~~~~~G~~i~~dgG~~~~~ 266 (298)
++|+||++|.+|||.+...
T Consensus 223 s~~itG~~i~vDGG~~ag~ 241 (244)
T d1nffa_ 223 SSYSTGAEFVVDGGTVAGL 241 (244)
T ss_dssp GTTCCSCEEEESTTGGGSC
T ss_pred hCCCcCCEEEECCCeeccc
Confidence 9999999999999987653
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=100.00 E-value=3.4e-55 Score=371.80 Aligned_cols=244 Identities=31% Similarity=0.340 Sum_probs=221.9
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
.+|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++ +.++.+++||++++++++++++++.++|
T Consensus 1 ndL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 77 (254)
T d1hdca_ 1 NDLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEF 77 (254)
T ss_dssp CCCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCceEEEEcccCCHHHHHHHHHHHHHHc
Confidence 4799999999999999999999999999999999999988777666554 5678999999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
|++|+||||||+....++.+.+.++|++.+++|+.++++++++++|+|++++ .|+||++||..+..+.+...
T Consensus 78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~--------~G~II~isS~~~~~~~~~~~ 149 (254)
T d1hdca_ 78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG--------GGSIVNISSAAGLMGLALTS 149 (254)
T ss_dssp SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCTTCH
T ss_pred CCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcC--------CCeecccccchhcccccchh
Confidence 9999999999998889999999999999999999999999999999999886 79999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCC-CHHHHHHHHHHhcCC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFG-EKWDIAMAALYLASD 246 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dva~~~~~L~s~ 246 (298)
+|++||+|+.+|+++++.|++ ++|||||+|+||+++|++...... +..+......|++|+. +|+|+|++++||+|+
T Consensus 150 ~Y~asKaal~~lt~~lA~e~a-~~gIrVN~I~PG~v~T~~~~~~~~--~~~~~~~~~~pl~R~g~~PedvA~~v~fL~S~ 226 (254)
T d1hdca_ 150 SYGASKWGVRGLSKLAAVELG-TDRIRVNSVHPGMTYTPMTAETGI--RQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSD 226 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHHHTC--CCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSG
T ss_pred hHHHHHHHHHHHHHHHHHHhC-CCceEEEEeeeCcccCccchhcCH--HHHHHHHhCCCCCCCCCCHHHHHHHHHHHhch
Confidence 999999999999999999998 889999999999999886533221 1223445567889997 699999999999999
Q ss_pred CCCCccccEEEeCCCCCCC
Q 022386 247 AGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 247 ~~~~~~G~~i~~dgG~~~~ 265 (298)
.++|+||+.|.+|||++..
T Consensus 227 ~a~~itG~~i~vDGG~t~g 245 (254)
T d1hdca_ 227 TSSYVTGAELAVDGGWTTG 245 (254)
T ss_dssp GGTTCCSCEEEESTTTTTS
T ss_pred hhCCCCCceEEeCCCccCC
Confidence 9999999999999998873
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=4.5e-54 Score=361.65 Aligned_cols=236 Identities=25% Similarity=0.357 Sum_probs=209.8
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.-+|+||++|||||++|||+++|++|+++|++|++++|+.+. ..++..++||++|+++++++++++.++
T Consensus 2 ~psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~-----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 70 (237)
T d1uzma1 2 KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA-----------PKGLFGVEVDVTDSDAVDRAFTAVEEH 70 (237)
T ss_dssp CCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCC-----------CTTSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcch-----------hcCceEEEEecCCHHHHHHHHHHHHHh
Confidence 347999999999999999999999999999999999998653 235778999999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
||++|+||||||+....++.+.+.++|++++++|+.++++++|.++|+|++++ .|+||++||..+..+.+..
T Consensus 71 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~--------~g~Iv~isS~~~~~~~~~~ 142 (237)
T d1uzma1 71 QGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK--------FGRMIFIGSVSGLWGIGNQ 142 (237)
T ss_dssp HSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--------CEEEEEECCCCC-----CC
T ss_pred cCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccC--------CCceEEEcchhhccCCccc
Confidence 99999999999998889999999999999999999999999999999999987 7899999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
..|++||+|+.+|+++++.|++ ++|||||+|+||+++|++.... +++..+......|++|+.+|+|+|+++.||+|+
T Consensus 143 ~~Y~asKaal~~lt~~lA~e~~-~~gIrVN~I~PG~v~T~~~~~~--~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~ 219 (237)
T d1uzma1 143 ANYAASKAGVIGMARSIARELS-KANVTANVVAPGYIDTDMTRAL--DERIQQGALQFIPAKRVGTPAEVAGVVSFLASE 219 (237)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCHHHHHS--CHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHHHhhhh-cCCceeeeeeeCcCCChhhhcc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 9999999999999999999998 8899999999999999865432 456667788889999999999999999999999
Q ss_pred CCCCccccEEEeCCCCCC
Q 022386 247 AGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 247 ~~~~~~G~~i~~dgG~~~ 264 (298)
+++|+||++|.+|||.++
T Consensus 220 ~s~~itG~~i~vdGG~~m 237 (237)
T d1uzma1 220 DASYISGAVIPVDGGMGM 237 (237)
T ss_dssp GGTTCCSCEEEESTTTTC
T ss_pred hhcCCcCCeEEECCCCCC
Confidence 999999999999999764
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=100.00 E-value=3.3e-53 Score=360.92 Aligned_cols=249 Identities=27% Similarity=0.378 Sum_probs=229.5
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
.+|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+.++.++.||++++++++++++++.+.+
T Consensus 2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~ 81 (258)
T d1ae1a_ 2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF 81 (258)
T ss_dssp CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHh
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred -CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 88 -GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 88 -~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
+.+|++|||||.....++.+.+.++|++++++|+.+++++++++.|.|.++. .|+||+++|..+..+.+..
T Consensus 82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~--------~g~ii~isS~~~~~~~~~~ 153 (258)
T d1ae1a_ 82 DGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ--------NGNVIFLSSIAGFSALPSV 153 (258)
T ss_dssp TSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------SEEEEEECCGGGTSCCTTC
T ss_pred CCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccc--------ccccccccccccccccccc
Confidence 6899999999998889999999999999999999999999999999999987 7999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC----hHHHHHHHhhhccCCCCCCHHHHHHHHHH
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA----PEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 242 (298)
..|+++|+|+.+|++.+++|++ ++|||||+|+||+++|++...... .++..+.+....|++|+.+|+|+|++++|
T Consensus 154 ~~Y~~sK~al~~lt~~lA~el~-~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~pediA~~v~f 232 (258)
T d1ae1a_ 154 SLYSASKGAINQMTKSLACEWA-KDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAF 232 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhcC-cCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 9999999999999999999998 889999999999999987544332 35667778888999999999999999999
Q ss_pred hcCCCCCCccccEEEeCCCCCCC
Q 022386 243 LASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 243 L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
|+|+.++|+||+.|.+|||++..
T Consensus 233 L~S~~s~~itG~~i~vDGG~s~~ 255 (258)
T d1ae1a_ 233 LCFPAASYITGQIIWADGGFTAN 255 (258)
T ss_dssp HHSGGGTTCCSCEEEESTTGGGC
T ss_pred HhChhhCCCcCcEEEeCCCeecc
Confidence 99999999999999999998874
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=7.4e-54 Score=361.59 Aligned_cols=241 Identities=25% Similarity=0.323 Sum_probs=220.0
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
++|+||++|||||++|||+++|+.|+++|++|++++|+.++++++.+++ ..+.++.||++|+++++++++ +|
T Consensus 1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~----~~ 72 (242)
T d1cyda_ 1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----PGIEPVCVDLGDWDATEKALG----GI 72 (242)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHT----TC
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----CCCeEEEEeCCCHHHHHHHHH----Hc
Confidence 4699999999999999999999999999999999999988777766655 347889999999999877664 67
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
|++|+||||||+...+++.+.+.++|++.+++|+.++++++|.+.|.|.++.. +|+||+++|..+..+.+...
T Consensus 73 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~-------~g~ii~isS~~~~~~~~~~~ 145 (242)
T d1cyda_ 73 GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGV-------PGSIVNVSSMVAHVTFPNLI 145 (242)
T ss_dssp CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-------CEEEEEECCGGGTSCCTTBH
T ss_pred CCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcc-------cCcccccchhhccccCCccc
Confidence 99999999999988899999999999999999999999999999998765431 68999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~ 247 (298)
.|++||+|+.+|+|+++.|++ ++|||||+|+||+++|++.......++..+......|++|+.+|+|+|+++.||+|+.
T Consensus 146 ~Y~asKaal~~lt~~lA~e~~-~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeva~~v~fL~S~~ 224 (242)
T d1cyda_ 146 TYSSTKGAMTMLTKAMAMELG-PHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDR 224 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred cccchHHHHHHHHHHHHHHhC-ccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence 999999999999999999998 8899999999999999876666666778888889999999999999999999999999
Q ss_pred CCCccccEEEeCCCCCC
Q 022386 248 GKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 248 ~~~~~G~~i~~dgG~~~ 264 (298)
++|+||+.|.+|||++.
T Consensus 225 s~~itG~~i~vDGG~~a 241 (242)
T d1cyda_ 225 SASTSGGGILVDAGYLA 241 (242)
T ss_dssp GTTCCSSEEEESTTGGG
T ss_pred hcCcCCceEEeCcchhc
Confidence 99999999999999754
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=100.00 E-value=5.6e-53 Score=361.97 Aligned_cols=250 Identities=28% Similarity=0.339 Sum_probs=221.2
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
..|+||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++... ..+.+++||++|+++++++++++.++|
T Consensus 2 nrL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (268)
T d2bgka1 2 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP-DVISFVHCDVTKDEDVRNLVDTTIAKH 80 (268)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCC-CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4699999999999999999999999999999999999999999999988653 458889999999999999999999999
Q ss_pred CCccEEEECCCCCCCC--CCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC
Q 022386 88 GKLDILVNAAAGNFLV--PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (298)
Q Consensus 88 ~~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~ 165 (298)
|++|++|||||+.... .+.+.+.++|++++++|+.++++++|+++|+|.+++ .|+||+++|..+..+.++
T Consensus 81 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~--------~g~ii~iss~~~~~~~~~ 152 (268)
T d2bgka1 81 GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK--------KGSIVFTASISSFTAGEG 152 (268)
T ss_dssp SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT--------CEEEEEECCGGGTCCCTT
T ss_pred CCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcC--------CCCccccccccccccccc
Confidence 9999999999976543 477889999999999999999999999999999876 799999999998877655
Q ss_pred -chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCCh-HHHHHHH--hhhccCCCCCCHHHHHHHHH
Q 022386 166 -QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-EEIRSKA--TDYMAAYKFGEKWDIAMAAL 241 (298)
Q Consensus 166 -~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~dva~~~~ 241 (298)
...|++||+|+.+|+++++.||+ ++|||||+|+||+++|++....... ++..+.. ....+.+|+.+|+|+|++++
T Consensus 153 ~~~~Y~asKaal~~lt~~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~ 231 (268)
T d2bgka1 153 VSHVYTATKHAVLGLTTSLCTELG-EYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVA 231 (268)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHH
T ss_pred cccccchhHHHHHhCHHHHHHHhC-hhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHHHHHHHH
Confidence 45899999999999999999998 8899999999999999976554332 2222222 22347789999999999999
Q ss_pred HhcCCCCCCccccEEEeCCCCCCCCC
Q 022386 242 YLASDAGKYVNGNTLIVDGGNWLSNP 267 (298)
Q Consensus 242 ~L~s~~~~~~~G~~i~~dgG~~~~~~ 267 (298)
||+|+.++|+|||+|.+|||++...|
T Consensus 232 fL~S~~s~~itGq~i~VDGG~t~~~p 257 (268)
T d2bgka1 232 YLAGDESKYVSGLNLVIDGGYTRTNP 257 (268)
T ss_dssp HHHSGGGTTCCSCEEEESTTGGGCCT
T ss_pred HHhChhhCCccCceEEECcCcccCCC
Confidence 99999999999999999999998765
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-53 Score=360.34 Aligned_cols=241 Identities=27% Similarity=0.363 Sum_probs=220.2
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
..|+||++|||||++|||+++|+.|+++|++|++++|+.++++++.+++. .+..+.+|++|+++++++++ ++
T Consensus 3 ~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~----~~ 74 (244)
T d1pr9a_ 3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----GIEPVCVDLGDWEATERALG----SV 74 (244)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHT----TC
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC----CCeEEEEeCCCHHHHHHHHH----Hh
Confidence 46999999999999999999999999999999999999988877766653 47889999999999887764 67
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
|++|+||||||+...+++.+.+.++|++.+++|+.+++++++.++|.|.++.. .|+||+++|..+..+.+...
T Consensus 75 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~-------~g~Ii~isS~~~~~~~~~~~ 147 (244)
T d1pr9a_ 75 GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGV-------PGAIVNVSSQCSQRAVTNHS 147 (244)
T ss_dssp CCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-------CEEEEEECCGGGTSCCTTBH
T ss_pred CCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCC-------cceEeecccccccccccchh
Confidence 99999999999988899999999999999999999999999999997654321 69999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~ 247 (298)
.|++||+|+.+|+++++.|++ ++|||||+|+||+++|++........+..+......|++|+.+|+|+|+.+.||+|+.
T Consensus 148 ~Y~asKaal~~lt~~lA~el~-~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~ 226 (244)
T d1pr9a_ 148 VYCSTKGALDMLTKVMALELG-PHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDR 226 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred hhhhhHHHHHHHHHHHHHHhC-CCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence 999999999999999999998 8899999999999999987666666777778888999999999999999999999999
Q ss_pred CCCccccEEEeCCCCCC
Q 022386 248 GKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 248 ~~~~~G~~i~~dgG~~~ 264 (298)
++|+||+.|.+|||++.
T Consensus 227 a~~itG~~i~vDGG~~A 243 (244)
T d1pr9a_ 227 SGMTTGSTLPVEGGFWA 243 (244)
T ss_dssp GTTCCSCEEEESTTGGG
T ss_pred hCCcCCcEEEECccHhh
Confidence 99999999999999874
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-53 Score=361.82 Aligned_cols=243 Identities=32% Similarity=0.455 Sum_probs=218.6
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
..|+||++|||||++|||+++|+.|+++|++|++++|+.+.++++.+++ .++.++.||++|+++++++++++.++|
T Consensus 2 ~rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~----~~~~~~~~Dvs~~~~v~~~~~~~~~~~ 77 (250)
T d1ydea1 2 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----PGAVFILCDVTQEDDVKTLVSETIRRF 77 (250)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----TTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----CCCeEEEccCCCHHHHHHHHHHHHHhc
Confidence 3689999999999999999999999999999999999988777766554 458889999999999999999999999
Q ss_pred CCccEEEECCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 88 GKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 88 ~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
|++|+||||||... ..++++.+.++|++.+++|+.++++++|+++|+|+++ +|+||++||..+..+.+..
T Consensus 78 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~---------~G~Ii~isS~~~~~~~~~~ 148 (250)
T d1ydea1 78 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS---------QGNVINISSLVGAIGQAQA 148 (250)
T ss_dssp SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---------TCEEEEECCHHHHHCCTTC
T ss_pred CCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC---------CCCCcccccccccccccCc
Confidence 99999999999754 4667889999999999999999999999999999875 4899999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc----CChHHHHHHHhhhccCCCCCCHHHHHHHHHH
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK----LAPEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 242 (298)
..|++||+|+.+|+++++.|++ ++|||||+|+||+|+|++.... ..+++..+......|++|+.+|+|+|+++.|
T Consensus 149 ~~Y~asKaal~~lt~~lA~e~a-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eva~~v~f 227 (250)
T d1ydea1 149 VPYVATKGAVTAMTKALALDES-PYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVF 227 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHH
T ss_pred chhHHHHhhHHHHHHHHHHHhc-ccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 9999999999999999999998 8899999999999999864322 1234455566677899999999999999999
Q ss_pred hcCCCCCCccccEEEeCCCCCCC
Q 022386 243 LASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 243 L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
|+|+ ++|+||++|.+|||.++.
T Consensus 228 L~Sd-a~~itG~~i~vDGG~~lG 249 (250)
T d1ydea1 228 LASE-ANFCTGIELLVTGGAELG 249 (250)
T ss_dssp HHHH-CTTCCSCEEEESTTTTSC
T ss_pred HhCc-cCCCcCCeEEECCCcccC
Confidence 9986 789999999999998874
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.3e-53 Score=365.91 Aligned_cols=250 Identities=33% Similarity=0.553 Sum_probs=228.3
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC-----CCCeEEEEccCCCHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-----GIPAIGLEGDVRKREDAVRV 79 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~~~~~ 79 (298)
..+..|+||++|||||++|||+++|+.|+++|++|++++|+.+++++..+++... +.++.+++||++|+++++++
T Consensus 5 ~~~g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~ 84 (297)
T d1yxma1 5 LAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNL 84 (297)
T ss_dssp BCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHH
T ss_pred CCCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHH
Confidence 3567899999999999999999999999999999999999999999999888653 56799999999999999999
Q ss_pred HHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 80 VESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 80 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
++++.+.||++|+||||||+....++.+.+.++|++.+++|+.++++++++++|.|.+++ .|.||++|+. +
T Consensus 85 ~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~--------~g~Ii~~ss~-~ 155 (297)
T d1yxma1 85 VKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH--------GGSIVNIIVP-T 155 (297)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH--------CEEEEEECCC-C
T ss_pred HHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccc--------cccccccccc-c
Confidence 999999999999999999998889999999999999999999999999999999999876 7889988664 5
Q ss_pred ccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC--hHHHHHHHhhhccCCCCCCHHHHH
Q 022386 160 YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDYMAAYKFGEKWDIA 237 (298)
Q Consensus 160 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva 237 (298)
..+.+....|++||+|+.+|+|+++.|++ ++|||||+|+||+++|++...... .++..+......|++|+.+|+|+|
T Consensus 156 ~~~~~~~~~Y~asKaal~~ltk~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plgR~g~pedvA 234 (297)
T d1yxma1 156 KAGFPLAVHSGAARAGVYNLTKSLALEWA-CSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVS 234 (297)
T ss_dssp TTCCTTCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHH
T ss_pred cccccccccchhHHHHHHHHHHHHHHHhc-ccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCCCCcCHHHHH
Confidence 56778899999999999999999999998 889999999999999987654432 345556677788999999999999
Q ss_pred HHHHHhcCCCCCCccccEEEeCCCCCC
Q 022386 238 MAALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 238 ~~~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
++++||+|+.++|+||++|.+|||+++
T Consensus 235 ~~v~fL~Sd~s~~iTG~~i~VDGG~sl 261 (297)
T d1yxma1 235 SVVCFLLSPAASFITGQSVDVDGGRSL 261 (297)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHHHHhCchhcCcCCcEEEeCcChhh
Confidence 999999999999999999999999987
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=100.00 E-value=4.9e-53 Score=360.78 Aligned_cols=247 Identities=22% Similarity=0.407 Sum_probs=223.9
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHh-CCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
++|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+ .+.++.+++||++++++++++++++.++
T Consensus 5 m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (260)
T d1h5qa_ 5 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD 84 (260)
T ss_dssp ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 489999999999999999999999999999999999999988888777744 5778999999999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC----
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA---- 162 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~---- 162 (298)
||++|++|||||+...+++.+.+.++|++.+++|+.+++++++++.|+|.++.. ++.|+++++......
T Consensus 85 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~-------~g~i~~~~s~~~~~~~~~~ 157 (260)
T d1h5qa_ 85 LGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQ-------KGSIVVTSSMSSQIINQSS 157 (260)
T ss_dssp SCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-------CEEEEEECCGGGTSCCEEE
T ss_pred hCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhccccccccc-------ceEEEEeeccccccccccc
Confidence 999999999999988899999999999999999999999999999999865542 678888888765543
Q ss_pred ---CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHH
Q 022386 163 ---TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239 (298)
Q Consensus 163 ---~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (298)
.+....|++||+|+.+|+|+++.|++ ++|||||+|+||+++|++.... +++..+......|++|+.+|+|+|++
T Consensus 158 ~~~~~~~~~Y~asKaal~~lt~~lA~el~-~~gIrvN~I~PG~i~T~~~~~~--~~~~~~~~~~~~pl~R~g~pedvA~~ 234 (260)
T d1h5qa_ 158 LNGSLTQVFYNSSKAACSNLVKGLAAEWA-SAGIRVNALSPGYVNTDQTAHM--DKKIRDHQASNIPLNRFAQPEEMTGQ 234 (260)
T ss_dssp TTEECSCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCGGGGGS--CHHHHHHHHHTCTTSSCBCGGGGHHH
T ss_pred cccCccccchhhhhhhHHHHHHHHHHHhc-hhCeEEeecCCCcccCcchhcc--CHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 34678999999999999999999998 8899999999999999865432 46677788889999999999999999
Q ss_pred HHHhcCCCCCCccccEEEeCCCCCC
Q 022386 240 ALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 240 ~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
++||+|+.++|+||+.|.+|||+++
T Consensus 235 v~fL~S~~s~~itG~~i~VDGG~~~ 259 (260)
T d1h5qa_ 235 AILLLSDHATYMTGGEYFIDGGQLI 259 (260)
T ss_dssp HHHHHSGGGTTCCSCEEEECTTGGG
T ss_pred HHHHhcchhCCCcCceEEECCCeec
Confidence 9999999999999999999999865
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=6.7e-53 Score=360.70 Aligned_cols=246 Identities=29% Similarity=0.399 Sum_probs=210.1
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCC---CCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
.|+||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.+.+ .++.+++||++++++++++++++.+
T Consensus 2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (264)
T d1spxa_ 2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG 81 (264)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence 4899999999999999999999999999999999999999999999998764 3589999999999999999999999
Q ss_pred HhCCccEEEECCCCCCC----CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccc-ccc
Q 022386 86 HFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT-LHY 160 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~-~~~ 160 (298)
+||++|++|||||+... ..+.+.+.++|++.|++|+.++++++++++|+|+++. |.+|+++|. .+.
T Consensus 82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~---------g~iI~~~S~~~~~ 152 (264)
T d1spxa_ 82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK---------GEIVNISSIASGL 152 (264)
T ss_dssp HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---------CEEEEECCTTSSS
T ss_pred HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc---------Ccceeeeeecccc
Confidence 99999999999997533 3456678899999999999999999999999998864 566666555 457
Q ss_pred cCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCCh-------HHHHHHHhhhccCCCCCCH
Q 022386 161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-------EEIRSKATDYMAAYKFGEK 233 (298)
Q Consensus 161 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~ 233 (298)
.+.+....|++||+|+.+|+++++.|++ ++|||||+|+||+++|++......+ .+..+...+..|++|+.+|
T Consensus 153 ~~~~~~~~Y~asKaal~~lt~~lA~el~-~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~p 231 (264)
T d1spxa_ 153 HATPDFPYYSIAKAAIDQYTRNTAIDLI-QHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQP 231 (264)
T ss_dssp SCCTTSHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCH
T ss_pred ccCCCchhhhhhhhhHHHHHHHHHHHhc-ccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCH
Confidence 7888999999999999999999999998 8899999999999999875443322 2334456678899999999
Q ss_pred HHHHHHHHHhcCCC-CCCccccEEEeCCCCCC
Q 022386 234 WDIAMAALYLASDA-GKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 234 ~dva~~~~~L~s~~-~~~~~G~~i~~dgG~~~ 264 (298)
+|+|++++||+|++ ++|+||+.|.+|||.++
T Consensus 232 edvA~~v~fL~S~~~s~~itG~~i~vDGG~sl 263 (264)
T d1spxa_ 232 QDIAEVIAFLADRKTSSYIIGHQLVVDGGSSL 263 (264)
T ss_dssp HHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred HHHHHHHHHHhCCcccCCccCceEEeCCChhh
Confidence 99999999999964 89999999999999875
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=100.00 E-value=2.8e-53 Score=360.36 Aligned_cols=243 Identities=30% Similarity=0.380 Sum_probs=219.8
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
..|+||++|||||++|||+++|+.|+++|++|++++|+.+.++++.+++ +.+..+++||++++++++++++++.++|
T Consensus 2 nrL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 78 (253)
T d1hxha_ 2 NRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRL 78 (253)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCCeEEEEeecCCHHHHHHHHHHHHHHh
Confidence 3589999999999999999999999999999999999998888887776 5678899999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
|++|++|||||+....++.+.+.++|++.+++|+.++++++++++|+|+++ +|+||+++|..+..+.+...
T Consensus 79 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~---------~G~Iv~isS~~~~~~~~~~~ 149 (253)
T d1hxha_ 79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET---------GGSIINMASVSSWLPIEQYA 149 (253)
T ss_dssp CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT---------CEEEEEECCGGGTSCCTTBH
T ss_pred CCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc---------CCceecccchhhhcCccccc
Confidence 999999999999888899999999999999999999999999999999754 59999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCC--CCeEEEEEeCCcccCCcccCcCCh---HHHHHHHhhhccCCCCCCHHHHHHHHHH
Q 022386 168 HVSAAKAAVDSITRSLALEWGTD--YAIRVNGIAPGPIKDTAGVSKLAP---EEIRSKATDYMAAYKFGEKWDIAMAALY 242 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~--~girv~~i~PG~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~~~~ 242 (298)
+|++||+|+.+|+++++.|++ + +|||||+|+||+++|++....... ++.........+++|+.+|+|+|++++|
T Consensus 150 ~Y~asKaal~~lt~~lA~e~~-~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~f 228 (253)
T d1hxha_ 150 GYSASKAAVSALTRAAALSCR-KQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLF 228 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHH
T ss_pred cccchhHHHHHHHHHHHHHHh-hcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHHHHHHHHHH
Confidence 999999999999999999997 4 469999999999999875443322 3333344455678899999999999999
Q ss_pred hcCCCCCCccccEEEeCCCCC
Q 022386 243 LASDAGKYVNGNTLIVDGGNW 263 (298)
Q Consensus 243 L~s~~~~~~~G~~i~~dgG~~ 263 (298)
|+|+.++|+||+.|.+|||..
T Consensus 229 L~S~~s~~itG~~i~VDGG~~ 249 (253)
T d1hxha_ 229 LASDESSVMSGSELHADNSIL 249 (253)
T ss_dssp HHSGGGTTCCSCEEEESSSCT
T ss_pred HhChhhCCCcCcEEEECccHh
Confidence 999999999999999999965
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=9.2e-53 Score=361.26 Aligned_cols=248 Identities=25% Similarity=0.370 Sum_probs=217.8
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCC---CCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
.|+||++|||||++|||+++|+.|+++|++|++++|+.++++++.+++.+.+ .++.+++||++++++++++++++.+
T Consensus 2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~ 81 (272)
T d1xkqa_ 2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK 81 (272)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 4899999999999999999999999999999999999999999999998764 4689999999999999999999999
Q ss_pred HhCCccEEEECCCCCCCCCC----CCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEe-cccccc
Q 022386 86 HFGKLDILVNAAAGNFLVPA----EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI-SATLHY 160 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~v-ss~~~~ 160 (298)
+||++|++|||||.....++ .+.+.+.|++++++|+.++++++++++|+|++++ |.+|++ ||..+.
T Consensus 82 ~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~---------g~iI~~~Ss~a~~ 152 (272)
T d1xkqa_ 82 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK---------GEIVNVSSIVAGP 152 (272)
T ss_dssp HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---------CEEEEECCGGGSS
T ss_pred HhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC---------Cccccccchhccc
Confidence 99999999999998765544 3567789999999999999999999999998864 455555 556678
Q ss_pred cCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHH-------HHHHHhhhccCCCCCCH
Q 022386 161 TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE-------IRSKATDYMAAYKFGEK 233 (298)
Q Consensus 161 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 233 (298)
.+.+....|++||+|+.+|+|+++.|++ ++|||||+|+||+|+|++......+++ .........|++|+.+|
T Consensus 153 ~~~~~~~~Y~asKaal~~ltk~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~p 231 (272)
T d1xkqa_ 153 QAQPDFLYYAIAKAALDQYTRSTAIDLA-KFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKP 231 (272)
T ss_dssp SCCCSSHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCH
T ss_pred cCCCCcchhhhHHHHHHHHHHHHHHHhc-ccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCCCCcCH
Confidence 8999999999999999999999999998 889999999999999987654443322 22334566799999999
Q ss_pred HHHHHHHHHhcCCC-CCCccccEEEeCCCCCCCC
Q 022386 234 WDIAMAALYLASDA-GKYVNGNTLIVDGGNWLSN 266 (298)
Q Consensus 234 ~dva~~~~~L~s~~-~~~~~G~~i~~dgG~~~~~ 266 (298)
+|+|++++||+|++ +.|+||++|.+|||.++..
T Consensus 232 ediA~~v~fL~S~~as~~iTG~~i~vDGG~~l~~ 265 (272)
T d1xkqa_ 232 EHIANIILFLADRNLSFYILGQSIVADGGTSLVM 265 (272)
T ss_dssp HHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCB
T ss_pred HHHHHHHHHHhCcchhCCccCeEEEeCcCHHHhc
Confidence 99999999999975 5799999999999999853
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=1.4e-52 Score=360.28 Aligned_cols=250 Identities=25% Similarity=0.344 Sum_probs=221.8
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCC---CCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
.|+||+++||||++|||+++|+.|+++|++|++++|+.++++++.+++.+.+ .++.++.||++++++++++++++.+
T Consensus 1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (274)
T d1xhla_ 1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA 80 (274)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence 3799999999999999999999999999999999999999999999998764 3588999999999999999999999
Q ss_pred HhCCccEEEECCCCCCCC--CCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 86 HFGKLDILVNAAAGNFLV--PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
+||++|++|||||..... ...+.+.++|++.+++|+.++++++|+++|+|++++ +|.|+++||..+..+.
T Consensus 81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~--------~g~ii~~ss~~~~~~~ 152 (274)
T d1xhla_ 81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK--------GEIVNVSSIVAGPQAH 152 (274)
T ss_dssp HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--------CEEEEECCGGGSSSCC
T ss_pred HcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccc--------cccccchhhhhccccC
Confidence 999999999999975443 334568899999999999999999999999999876 6889999998999899
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHH-------HHHHHhhhccCCCCCCHHHH
Q 022386 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE-------IRSKATDYMAAYKFGEKWDI 236 (298)
Q Consensus 164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~dv 236 (298)
+....|++||+|+.+|+|+++.|++ ++|||||+|+||+++|++.......+. .........|++|+.+|+|+
T Consensus 153 ~~~~~Y~asKaal~~ltk~lA~ela-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pedi 231 (274)
T d1xhla_ 153 SGYPYYACAKAALDQYTRCTAIDLI-QHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEI 231 (274)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHH
T ss_pred CCCceehhhhhHHHHHHHHHHHHHh-HhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHHHH
Confidence 9999999999999999999999998 889999999999999986544432221 22233456799999999999
Q ss_pred HHHHHHhcCC-CCCCccccEEEeCCCCCCCCC
Q 022386 237 AMAALYLASD-AGKYVNGNTLIVDGGNWLSNP 267 (298)
Q Consensus 237 a~~~~~L~s~-~~~~~~G~~i~~dgG~~~~~~ 267 (298)
|++++||+|+ .++|+||++|.+|||.++..+
T Consensus 232 A~~v~fL~S~d~s~~itG~~i~vDGG~~l~~g 263 (274)
T d1xhla_ 232 ANIIVFLADRNLSSYIIGQSIVADGGSTLVMG 263 (274)
T ss_dssp HHHHHHHHCHHHHTTCCSCEEEESTTGGGCCG
T ss_pred HHHHHHHcCCccccCccCcEEEeCcCHHHhcC
Confidence 9999999995 589999999999999998644
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=3.7e-52 Score=354.84 Aligned_cols=249 Identities=23% Similarity=0.260 Sum_probs=216.5
Q ss_pred CCCCCCCCcEEEEecCCc--hhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHH
Q 022386 5 FKGDILKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES 82 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~--giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~ 82 (298)
|+..+|+||++|||||+| |||+++|++|+++|++|++++|+.+..++ .+++...+.+..+++||++|+++++++++.
T Consensus 1 M~~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 79 (256)
T d1ulua_ 1 MLTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPE-AEKLAEALGGALLFRADVTQDEELDALFAG 79 (256)
T ss_dssp CEEECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHHHHTTCCEEEECCTTCHHHHHHHHHH
T ss_pred CCCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHH-HHHhhhccCcccccccccCCHHHHHHHHHH
Confidence 556689999999999986 99999999999999999999998654444 444445556778899999999999999999
Q ss_pred HHHHhCCccEEEECCCCCC----CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccc
Q 022386 83 TINHFGKLDILVNAAAGNF----LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (298)
Q Consensus 83 ~~~~~~~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~ 158 (298)
+.++||++|++|||||+.. ..++.+.+.++|+..+++|+.+++.+++.+.|+|++ +|+||+++|..
T Consensus 80 ~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~----------~G~Iv~isS~~ 149 (256)
T d1ulua_ 80 VKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE----------GGGIVTLTYYA 149 (256)
T ss_dssp HHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE----------EEEEEEEECGG
T ss_pred HHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc----------CCEEEEEeehH
Confidence 9999999999999999753 245667889999999999999999999999999875 58899999999
Q ss_pred cccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHH
Q 022386 159 HYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAM 238 (298)
Q Consensus 159 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 238 (298)
+..+.+....|++||+|+.+|+++++.|++ ++|||||+|+||+++|++.......++..+......|++|+.+|+|+|+
T Consensus 150 ~~~~~~~~~~Y~asKaal~~ltr~lA~ela-~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~ 228 (256)
T d1ulua_ 150 SEKVVPKYNVMAIAKAALEASVRYLAYELG-PKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGN 228 (256)
T ss_dssp GTSBCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCC----------CHHHHHHHHHHSTTSSCCCHHHHHH
T ss_pred hcCCCCCchHHHHHHHHHHHHHHHHHHHhc-ccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 999999999999999999999999999998 8899999999999999877666566777888888999999999999999
Q ss_pred HHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 239 AALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 239 ~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
+++||+|+.++|+||+.|.+|||+++.
T Consensus 229 ~v~fL~S~~s~~itG~~i~VDGG~~~~ 255 (256)
T d1ulua_ 229 LGLFLLSPLASGITGEVVYVDAGYHIM 255 (256)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred HHHHHhCchhCCccCCeEEECcCEeCc
Confidence 999999999999999999999999874
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=5.8e-52 Score=352.41 Aligned_cols=236 Identities=18% Similarity=0.250 Sum_probs=215.7
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l 93 (298)
|+|||||++|||+++|++|+++|++|++++|+.+.++++.+.... +.+||++++++++++++++.++||+||+|
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~------~~~~dv~~~~~~~~~~~~~~~~~G~iDiL 75 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET------YPQLKPMSEQEPAELIEAVTSAYGQVDVL 75 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHH------CTTSEECCCCSHHHHHHHHHHHHSCCCEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCc------EEEeccCCHHHHHHHHHHHHHHcCCCCEE
Confidence 899999999999999999999999999999998887776654433 24689999999999999999999999999
Q ss_pred EECCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhhHHH
Q 022386 94 VNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA 172 (298)
Q Consensus 94 i~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~s 172 (298)
|||||+.. .+++.+.+.++|++.+++|+.++++++|+++|+|++++ .|+||++||..+..+.+....|++|
T Consensus 76 VnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~--------~G~IV~isS~~~~~~~~~~~~Y~as 147 (252)
T d1zmta1 76 VSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK--------SGHIIFITSATPFGPWKELSTYTSA 147 (252)
T ss_dssp EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CCEEEEECCSTTTSCCTTCHHHHHH
T ss_pred EECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccc--------cceeecccccccccccccccccccc
Confidence 99999754 47888999999999999999999999999999999886 7999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC------ChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 173 KAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL------APEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 173 K~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
|+|+.+|+|+++.|++ ++|||||+|+||+++|++..... ..++..+......|++|+.+|+|+|++++||+|+
T Consensus 148 Kaal~~lt~~lA~ela-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~ 226 (252)
T d1zmta1 148 RAGACTLANALSKELG-EYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASG 226 (252)
T ss_dssp HHHHHHHHHHHHHHHG-GGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTT
T ss_pred cccHHHHHHHHHHHhc-ccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 9999999999999998 88999999999999998765433 2355667788899999999999999999999999
Q ss_pred CCCCccccEEEeCCCCCC
Q 022386 247 AGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 247 ~~~~~~G~~i~~dgG~~~ 264 (298)
.++|+||++|.+|||+++
T Consensus 227 ~s~~iTG~~i~vdGG~~~ 244 (252)
T d1zmta1 227 SCDYLTGQVFWLAGGFPM 244 (252)
T ss_dssp SCGGGTTCEEEESTTCCC
T ss_pred hhcCCcCCeEEECCCcee
Confidence 999999999999999887
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=100.00 E-value=3.7e-51 Score=348.98 Aligned_cols=244 Identities=28% Similarity=0.479 Sum_probs=220.5
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEE-cCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIM-GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.+|+||++|||||++|||+++|+.|+++|++|+++ .++.+..+++.+++++.+.++.+++||++|+++++++++.+.++
T Consensus 2 ~~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (259)
T d1ja9a_ 2 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH 81 (259)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHH
Confidence 36999999999999999999999999999999986 45566688889999999999999999999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc-ccCCCC
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH-YTATWY 165 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~-~~~~~~ 165 (298)
+|+||++|||||.....++.+.+.++|++.+++|+.+++++++.++|+|+++ +++++++|..+ ..+.+.
T Consensus 82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~----------g~~iii~s~~~~~~~~~~ 151 (259)
T d1ja9a_ 82 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG----------GRIILTSSIAAVMTGIPN 151 (259)
T ss_dssp HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE----------EEEEEECCGGGTCCSCCS
T ss_pred cCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC----------CcccccccccccccCCCC
Confidence 9999999999999888999999999999999999999999999999999763 56777766555 446788
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccC-----------cCChHHHHHHHhhhccCCCCCCHH
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS-----------KLAPEEIRSKATDYMAAYKFGEKW 234 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~ 234 (298)
...|++||+|+.+|+|++++|++ ++|||||+|+||+++|++... ....++..+......|++|+++|+
T Consensus 152 ~~~Y~asK~al~~l~r~lA~e~~-~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~ 230 (259)
T d1ja9a_ 152 HALYAGSKAAVEGFCRAFAVDCG-AKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPA 230 (259)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHh-hcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHH
Confidence 99999999999999999999998 889999999999999875321 223466677788899999999999
Q ss_pred HHHHHHHHhcCCCCCCccccEEEeCCCC
Q 022386 235 DIAMAALYLASDAGKYVNGNTLIVDGGN 262 (298)
Q Consensus 235 dva~~~~~L~s~~~~~~~G~~i~~dgG~ 262 (298)
||+++++||+|+.++++||+.|.+|||.
T Consensus 231 eVa~~v~fL~S~~a~~itG~~i~vDGG~ 258 (259)
T d1ja9a_ 231 DIGRAVSALCQEESEWINGQVIKLTGGG 258 (259)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHHHHHHHhCchhcCCcCceEEeCCCC
Confidence 9999999999999999999999999995
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=100.00 E-value=3.2e-51 Score=352.21 Aligned_cols=244 Identities=24% Similarity=0.312 Sum_probs=214.3
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
+.|+||++|||||++|||+++|+.|+++|++|++++|+.++++++.+++ +.++..+.||++++++++++++++.++|
T Consensus 1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 77 (276)
T d1bdba_ 1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH---GDNVLGIVGDVRSLEDQKQAASRCVARF 77 (276)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCCeeEEecccccHHHHHHHHHHHHHHh
Confidence 3589999999999999999999999999999999999988887766655 5678999999999999999999999999
Q ss_pred CCccEEEECCCCCCCCC-----CCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC
Q 022386 88 GKLDILVNAAAGNFLVP-----AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~-----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~ 162 (298)
|++|++|||||+..... ..+.+.+.|+++|++|+.++++++|+++|+|+++ +|+||+++|..+..+
T Consensus 78 g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~---------~g~iI~i~S~~~~~~ 148 (276)
T d1bdba_ 78 GKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVAS---------RGNVIFTISNAGFYP 148 (276)
T ss_dssp SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---------TCEEEEECCGGGTST
T ss_pred CCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhc---------CCCceeeeechhccC
Confidence 99999999999754332 2344557899999999999999999999999876 488999999999999
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc--------CChHHHHHHHhhhccCCCCCCHH
Q 022386 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK--------LAPEEIRSKATDYMAAYKFGEKW 234 (298)
Q Consensus 163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 234 (298)
.+....|++||+|+.+|+|+++.|++ + +||||+|+||+|+|++.... ...++..+.+....|++|+.+|+
T Consensus 149 ~~~~~~Y~asKaal~~ltr~lA~ela-~-~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pe 226 (276)
T d1bdba_ 149 NGGGPLYTAAKHAIVGLVRELAFELA-P-YVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVE 226 (276)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHHHT-T-TCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGG
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHhh-c-ceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHH
Confidence 99999999999999999999999998 6 49999999999999864322 12344566777889999999999
Q ss_pred HHHHHHHHhcCC-CCCCccccEEEeCCCCCCC
Q 022386 235 DIAMAALYLASD-AGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 235 dva~~~~~L~s~-~~~~~~G~~i~~dgG~~~~ 265 (298)
|+|++++||+|+ .++|+||+.|.||||.++.
T Consensus 227 eva~~v~fL~S~~~a~~itG~~i~VDGG~~~~ 258 (276)
T d1bdba_ 227 EYTGAYVFFATRGDAAPATGALLNYDGGLGVR 258 (276)
T ss_dssp GGSHHHHHHHCHHHHTTCSSCEEEESSSGGGC
T ss_pred HHHHHHHHHcCCcccCCeeCcEEEECcChhhc
Confidence 999999999985 6899999999999998873
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=100.00 E-value=3.4e-51 Score=345.17 Aligned_cols=239 Identities=26% Similarity=0.400 Sum_probs=211.0
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
.|+||++|||||++|||+++|++|+++|++|++++|+.+++++. +++.+.++.+++||++++++++++++++.+.||
T Consensus 2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g 78 (241)
T d2a4ka1 2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEA---VAALEAEAIAVVADVSDPKAVEAVFAEALEEFG 78 (241)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH---HHHcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 58999999999999999999999999999999999998765544 445577899999999999999999999999999
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchh
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~ 168 (298)
++|++|||||.....++.+.+.++|.+.+++|+.+++.+++.++|+|.++ +.++++|+. +..+.+.+..
T Consensus 79 ~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~----------~~i~~~ss~-a~~~~~~~~~ 147 (241)
T d2a4ka1 79 RLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG----------GSLVLTGSV-AGLGAFGLAH 147 (241)
T ss_dssp CCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT----------CEEEEECCC-TTCCHHHHHH
T ss_pred CccEeccccccccccchhhhhccccccccccccccccccccccccccccc----------cceeecccc-ccccccCccc
Confidence 99999999999888999999999999999999999999999999998763 445555554 4445578899
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCC
Q 022386 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAG 248 (298)
Q Consensus 169 Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~ 248 (298)
|+++|+|+++|++.++.|++ ++|||||+|+||+++|++... .+++..+...+..|.+|+.+|+|+|++++||+|+.+
T Consensus 148 Y~~sK~al~~lt~~lA~el~-~~gIrvN~I~PG~v~T~~~~~--~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~S~~s 224 (241)
T d2a4ka1 148 YAAGKLGVVGLARTLALELA-RKGVRVNVLLPGLIQTPMTAG--LPPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEES 224 (241)
T ss_dssp HHHCSSHHHHHHHHHHHHHT-TTTCEEEEEEECSBCCGGGTT--SCHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred cchhhHHHHHHHHHHHHHHh-HhCCEEeeeccCcCCCHHHHh--hhHhHHHHHHhCCCCCCCcCHHHHHHHHHHHhcchh
Confidence 99999999999999999998 889999999999999986532 345667778888999999999999999999999999
Q ss_pred CCccccEEEeCCCCCC
Q 022386 249 KYVNGNTLIVDGGNWL 264 (298)
Q Consensus 249 ~~~~G~~i~~dgG~~~ 264 (298)
+++||+.|.+|||+++
T Consensus 225 ~~itG~~i~vDGG~s~ 240 (241)
T d2a4ka1 225 AYITGQALYVDGGRSI 240 (241)
T ss_dssp TTCCSCEEEESTTTTT
T ss_pred CCCcCceEEeCCCccc
Confidence 9999999999999876
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=2.2e-50 Score=339.01 Aligned_cols=230 Identities=24% Similarity=0.347 Sum_probs=207.4
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
|+||++|||||++|||+++|+.|+++|++|++++|+.+.+++ .+ ..++.||+++. ++.+.+++++
T Consensus 2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~-------~~--~~~~~~Dv~~~------~~~~~~~~g~ 66 (234)
T d1o5ia_ 2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR-------SG--HRYVVCDLRKD------LDLLFEKVKE 66 (234)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-------TC--SEEEECCTTTC------HHHHHHHSCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh-------cC--CcEEEcchHHH------HHHHHHHhCC
Confidence 789999999999999999999999999999999999754432 22 35678999864 4456678899
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhh
Q 022386 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 169 (298)
Q Consensus 90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y 169 (298)
+|+||||||.....++.+.+.++|++.+++|+.++++++|+++|+|++++ .|+||+++|..+..+.+....|
T Consensus 67 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~--------~G~ii~i~S~~~~~~~~~~~~Y 138 (234)
T d1o5ia_ 67 VDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG--------WGRIVAITSFSVISPIENLYTS 138 (234)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCTTBHHH
T ss_pred CcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccc--------cccccccccccccccccccccc
Confidence 99999999988888999999999999999999999999999999999876 7999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCCC
Q 022386 170 SAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK 249 (298)
Q Consensus 170 ~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~ 249 (298)
++||+|+.+|+|+++.|++ ++|||||+|+||+++|++..... +++..+.+....|++|+.+|+|+|++++||+|+.++
T Consensus 139 ~asKaal~~ltk~lA~ela-~~gIrVN~I~PG~v~T~~~~~~~-~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~ 216 (234)
T d1o5ia_ 139 NSARMALTGFLKTLSFEVA-PYGITVNCVAPGWTETERVKELL-SEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKAS 216 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCTTHHHHS-CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred hhHHHHHHHHHHHHHHHhc-ccCeEEeecccCccchhhhhhhc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhc
Confidence 9999999999999999998 88999999999999998765544 355567778889999999999999999999999999
Q ss_pred CccccEEEeCCCCCC
Q 022386 250 YVNGNTLIVDGGNWL 264 (298)
Q Consensus 250 ~~~G~~i~~dgG~~~ 264 (298)
|+||++|.+|||.+.
T Consensus 217 ~itG~~i~vDGG~s~ 231 (234)
T d1o5ia_ 217 YLTGQTIVVDGGLSK 231 (234)
T ss_dssp TCCSCEEEESTTCCC
T ss_pred CCcCcEEEECccccc
Confidence 999999999999875
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=100.00 E-value=9.2e-50 Score=342.77 Aligned_cols=248 Identities=32% Similarity=0.492 Sum_probs=219.7
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCC-hhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
...+|+||++|||||++|||+++|++|+++|++|++++++ .+.++++.+++.+.+.++.+++||++++++++++++++.
T Consensus 12 ~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~ 91 (272)
T d1g0oa_ 12 QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAV 91 (272)
T ss_dssp GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHH
Confidence 3446999999999999999999999999999999999887 556788888898889999999999999999999999999
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc-cCC
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TAT 163 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~-~~~ 163 (298)
+.||++|++|||+|.....++.+.+.++|++.+++|+.+++++++++.|+|.+ .|++++++|..+. .+.
T Consensus 92 ~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~----------~g~~i~i~s~~~~~~~~ 161 (272)
T d1g0oa_ 92 KIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI----------GGRLILMGSITGQAKAV 161 (272)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT----------TCEEEEECCGGGTCSSC
T ss_pred HHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccc----------ccccccccccccccccc
Confidence 99999999999999988889999999999999999999999999999999976 4778888777654 456
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccC----------cCChHHHH-HHHhhhccCCCCCC
Q 022386 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS----------KLAPEEIR-SKATDYMAAYKFGE 232 (298)
Q Consensus 164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~----------~~~~~~~~-~~~~~~~~~~~~~~ 232 (298)
+....|+++|+|+.+|+|+++.||+ ++|||||+|+||+++|++... ....++.. .......|++|+.+
T Consensus 162 ~~~~~Y~asKaal~~ltk~lA~e~~-~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~ 240 (272)
T d1g0oa_ 162 PKHAVYSGSKGAIETFARCMAIDMA-DKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGL 240 (272)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBC
T ss_pred cchhhHHHHHHHHHHHHHHHHHHhc-hhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcC
Confidence 6778899999999999999999998 889999999999999875322 11222222 23556789999999
Q ss_pred HHHHHHHHHHhcCCCCCCccccEEEeCCCCCC
Q 022386 233 KWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 233 ~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
|+|||+++.||+|+.++++||++|.+|||.++
T Consensus 241 peevA~~v~fL~s~~s~~itG~~i~vDGG~~m 272 (272)
T d1g0oa_ 241 PIDIARVVCFLASNDGGWVTGKVIGIDGGACM 272 (272)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred HHHHHHHHHHHhCchhcCccCceEeECCCCCC
Confidence 99999999999999999999999999999764
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-50 Score=341.68 Aligned_cols=241 Identities=28% Similarity=0.338 Sum_probs=213.2
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC--CCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
.+||++|||||++|||+++|+.|+++|++|++++|+.+++++..+++.+. +.++.+++||++++++++++++++.++|
T Consensus 1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (254)
T d2gdza1 1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF 80 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 47999999999999999999999999999999999999999999988764 4578999999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
|++|+||||||.... ++|++.+++|+.+++++++.++|+|.+++.+ .+|+||++||..+..+.+...
T Consensus 81 G~iDilVnnAg~~~~--------~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~-----~~g~Iv~isS~~~~~~~~~~~ 147 (254)
T d2gdza1 81 GRLDILVNNAGVNNE--------KNWEKTLQINLVSVISGTYLGLDYMSKQNGG-----EGGIIINMSSLAGLMPVAQQP 147 (254)
T ss_dssp SCCCEEEECCCCCCS--------SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTC-----CCEEEEEECCGGGTSCCTTCH
T ss_pred CCcCeeccccccccc--------ccchheeeeehhhHHHHHHHHHHHHHHhhcC-----CCcEEEeeccHhhccCCCCcc
Confidence 999999999997532 4588999999999999999999999876532 268999999999999999999
Q ss_pred hhHHHHHHHHHHHHH--HHHHhcCCCCeEEEEEeCCcccCCcccCcCCh------HHHHHHHhhhccCCCCCCHHHHHHH
Q 022386 168 HVSAAKAAVDSITRS--LALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP------EEIRSKATDYMAAYKFGEKWDIAMA 239 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~--la~e~~~~~girv~~i~PG~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~dva~~ 239 (298)
+|++||+|+.+|+|+ ++.|++ ++|||||+|+||+++|++....... .+..+.+....|++++.+|+|+|++
T Consensus 148 ~Y~asKaal~~ltrs~ala~e~~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~ 226 (254)
T d2gdza1 148 VYCASKHGIVGFTRSAALAANLM-NSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANG 226 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhc-CCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 999999999999997 688998 8899999999999999865443322 2334556677888999999999999
Q ss_pred HHHhcCCCCCCccccEEEeCCCCCCCC
Q 022386 240 ALYLASDAGKYVNGNTLIVDGGNWLSN 266 (298)
Q Consensus 240 ~~~L~s~~~~~~~G~~i~~dgG~~~~~ 266 (298)
++||+|++ ++||++|.||||..+..
T Consensus 227 v~fL~s~~--~itG~~i~VdGG~~~~~ 251 (254)
T d2gdza1 227 LITLIEDD--ALNGAIMKITTSKGIHF 251 (254)
T ss_dssp HHHHHHCT--TCSSCEEEEETTTEEEE
T ss_pred HHHHHcCC--CCCCCEEEECCCCeeec
Confidence 99999974 59999999999988754
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-49 Score=336.66 Aligned_cols=246 Identities=22% Similarity=0.253 Sum_probs=215.4
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCC--CCeEEEEccCCCHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
|..|+||++|||||++|||+++|+.|+++|++|++++|+.++++++.+++++.+ .++.+++||++++++++++++++.
T Consensus 5 M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~ 84 (257)
T d1xg5a_ 5 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR 84 (257)
T ss_dssp CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 445999999999999999999999999999999999999999999999998865 468899999999999999999999
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC--
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-- 162 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~-- 162 (298)
++||+||+||||||....+++.+.+.++|++.+++|+.+++++++.++|.|++++. .+|+||+++|..+...
T Consensus 85 ~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~------~~g~Ii~isS~~~~~~~p 158 (257)
T d1xg5a_ 85 SQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNV------DDGHIININSMSGHRVLP 158 (257)
T ss_dssp HHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC------CSCEEEEECCGGGTSCCS
T ss_pred HhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhcc------CCCceEEEechHhcCCCC
Confidence 99999999999999988899999999999999999999999999999999987642 2689999999988754
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHh--cCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHH
Q 022386 163 TWYQIHVSAAKAAVDSITRSLALEW--GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240 (298)
Q Consensus 163 ~~~~~~Y~~sK~a~~~l~~~la~e~--~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 240 (298)
.+....|+++|+|+.+|+++++.|+ + ++|||||+|+||+++|++..... +...+......+.+++.+|+|+|+++
T Consensus 159 ~~~~~~Y~~sKaal~~ltr~la~el~~~-~~~I~vn~i~PG~i~t~~~~~~~--~~~~~~~~~~~~~~r~~~pedvA~~v 235 (257)
T d1xg5a_ 159 LSVTHFYSATKYAVTALTEGLRQELREA-QTHIRATCISPGVVETQFAFKLH--DKDPEKAAATYEQMKCLKPEDVAEAV 235 (257)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHHHHHHT-TCCCEEEEEEESCBCSSHHHHHT--TTCHHHHHHHHC---CBCHHHHHHHH
T ss_pred CcccHHHHHHHHHHHhCHHHHHHHHHhC-CCCEEEEEEeCCCCCChhhhhcC--hhhHHHHHhcCCCCCCcCHHHHHHHH
Confidence 4456779999999999999999998 5 77999999999999987643332 22234566677999999999999999
Q ss_pred HHhcCCCCCCccccEEEeCCC
Q 022386 241 LYLASDAGKYVNGNTLIVDGG 261 (298)
Q Consensus 241 ~~L~s~~~~~~~G~~i~~dgG 261 (298)
+||++++++++|||++.-++|
T Consensus 236 ~fL~s~~a~~itG~i~i~~~g 256 (257)
T d1xg5a_ 236 IYVLSTPAHIQIGDIQMRPTG 256 (257)
T ss_dssp HHHHHSCTTEEEEEEEEEETT
T ss_pred HHHhCChhcCeECCEEEEeCC
Confidence 999999999999997555444
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=100.00 E-value=4e-49 Score=332.08 Aligned_cols=230 Identities=19% Similarity=0.255 Sum_probs=211.0
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCc-------EEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAA-------IAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~-------Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
+++|||||++|||+++|+.|+++|++ |++++|+.+.++++.+++.+.+.++.++.||++|+++++++++++.+
T Consensus 2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (240)
T d2bd0a1 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE 81 (240)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 57999999999999999999999998 89999999999999999999899999999999999999999999999
Q ss_pred HhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC
Q 022386 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~ 165 (298)
+||++|+||||||+...+++.+.+.++|+++|++|+.|+++++|+++|+|++++ +|+||++||..+..+.+.
T Consensus 82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~--------~G~Ii~isS~~~~~~~~~ 153 (240)
T d2bd0a1 82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH--------SGHIFFITSVAATKAFRH 153 (240)
T ss_dssp HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCTT
T ss_pred HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcC--------CCceEEEechhhcCCCCC
Confidence 999999999999999889999999999999999999999999999999999876 799999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcC
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s 245 (298)
...|++||+|+.+|+++++.|++ ++|||||+|+||+++|++..... ++ ...++.+|+|+|+.++||++
T Consensus 154 ~~~Y~asK~al~~lt~~la~el~-~~gIrvn~i~PG~v~T~~~~~~~-~~----------~~~~~~~PedvA~~v~~l~s 221 (240)
T d2bd0a1 154 SSIYCMSKFGQRGLVETMRLYAR-KCNVRITDVQPGAVYTPMWGKVD-DE----------MQALMMMPEDIAAPVVQAYL 221 (240)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHT-TTTEEEEEEEECCBCSTTTCCCC-ST----------TGGGSBCHHHHHHHHHHHHT
T ss_pred ChHHHHHHHHHHHHHHHHHHHhC-cCCeEEEEeeeCcccCchhhhcC-Hh----------hHhcCCCHHHHHHHHHHHHc
Confidence 99999999999999999999998 88999999999999998754332 11 11346799999999999999
Q ss_pred CCCCCccccE-EEeCCCC
Q 022386 246 DAGKYVNGNT-LIVDGGN 262 (298)
Q Consensus 246 ~~~~~~~G~~-i~~dgG~ 262 (298)
+++++++|+. +..+||.
T Consensus 222 ~~~~~~~~~~~i~p~~G~ 239 (240)
T d2bd0a1 222 QPSRTVVEEIILRPTSGD 239 (240)
T ss_dssp SCTTEEEEEEEEEETTCC
T ss_pred CCccCccCCEEEEecCCC
Confidence 9889988875 4477763
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=100.00 E-value=3.5e-49 Score=343.04 Aligned_cols=250 Identities=32% Similarity=0.538 Sum_probs=225.0
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHh-CCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
+.+|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.. .+.++.+++||++++++++++++.+.+
T Consensus 20 ~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~ 99 (294)
T d1w6ua_ 20 PNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIK 99 (294)
T ss_dssp TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhh
Confidence 4589999999999999999999999999999999999999999998888765 467889999999999999999999999
Q ss_pred HhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC
Q 022386 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~ 165 (298)
.++++|++|||||.....++.+.+.++|++.+.+|+.+.+.+.+.+.+.+..... ++.+++++|..+..+.+.
T Consensus 100 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-------~~~i~~~ss~~~~~~~~~ 172 (294)
T d1w6ua_ 100 VAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQK-------GAAFLSITTIYAETGSGF 172 (294)
T ss_dssp HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-------CEEEEEECCTHHHHCCTT
T ss_pred hccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccc-------cccccccccchhhhcccc
Confidence 9999999999999988888889999999999999999999999988887776542 678889999999889999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC-hHHHHHHHhhhccCCCCCCHHHHHHHHHHhc
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALYLA 244 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~ 244 (298)
..+|++||+|+.+|+|.+|.|++ ++|||||+|+||+++|++...... .++..+......|++|+++|+|+|++++||+
T Consensus 173 ~~~YsasKaal~~ltk~lA~ela-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~ 251 (294)
T d1w6ua_ 173 VVPSASAKAGVEAMSKSLAAEWG-KYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLC 251 (294)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHHHHHHHHh-HhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCCCCCCHHHHHHHHHHHh
Confidence 99999999999999999999998 889999999999999987655433 4556677888899999999999999999999
Q ss_pred CCCCCCccccEEEeCCCCCC
Q 022386 245 SDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 245 s~~~~~~~G~~i~~dgG~~~ 264 (298)
++.++|+||++|.+|||.++
T Consensus 252 sd~s~~itG~~i~vDGG~~l 271 (294)
T d1w6ua_ 252 SDYASWINGAVIKFDGGEEV 271 (294)
T ss_dssp SGGGTTCCSCEEEESTTHHH
T ss_pred CchhcCCCCcEEEECCChhh
Confidence 99999999999999999886
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-49 Score=333.54 Aligned_cols=240 Identities=27% Similarity=0.338 Sum_probs=211.5
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
|+.|+||++|||||++|||+++|+.|+++|++|++++|+.++++++.+ ...+....+|+.+++.++.. .+.
T Consensus 1 m~~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~-----~~~~~~~~~d~~~~~~~~~~----~~~ 71 (245)
T d2ag5a1 1 MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK-----YPGIQTRVLDVTKKKQIDQF----ANE 71 (245)
T ss_dssp CCTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG-----STTEEEEECCTTCHHHHHHH----HHH
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-----ccCCceeeeecccccccccc----ccc
Confidence 456999999999999999999999999999999999999876655432 23477888999887766554 446
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc-cCCCC
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWY 165 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~-~~~~~ 165 (298)
++++|++|||||....+++.+.+.++|+..+++|+.+++++++++.|+|.+++ .|+||+++|..+. .+.+.
T Consensus 72 ~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~--------~g~Ii~isS~~~~~~~~~~ 143 (245)
T d2ag5a1 72 VERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK--------SGNIINMSSVASSVKGVVN 143 (245)
T ss_dssp CSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCSBTTTBCCTT
T ss_pred cccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCC--------CceeeeeechhhccCCccc
Confidence 68999999999998888899999999999999999999999999999999887 7999999998774 56788
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccC----cCChHHHHHHHhhhccCCCCCCHHHHHHHHH
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS----KLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~ 241 (298)
...|+++|+|+++|+|++|.|++ ++|||||+|+||+++|++... ....++....+....|++|+.+|+|+++.+.
T Consensus 144 ~~~Y~~sKaal~~l~r~lA~e~~-~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~~v~ 222 (245)
T d2ag5a1 144 RCVYSTTKAAVIGLTKSVAADFI-QQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCV 222 (245)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHhh-hhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 89999999999999999999998 889999999999999876433 2234556677778899999999999999999
Q ss_pred HhcCCCCCCccccEEEeCCCCCC
Q 022386 242 YLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 242 ~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
||++++++++||+.|.||||+++
T Consensus 223 fL~s~~s~~iTG~~i~VDGG~sl 245 (245)
T d2ag5a1 223 YLASDESAYVTGNPVIIDGGWSL 245 (245)
T ss_dssp HHHSGGGTTCCSCEEEECTTGGG
T ss_pred HHhChhhCCCcCceEEeCCCcCC
Confidence 99999999999999999999875
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.3e-48 Score=337.68 Aligned_cols=253 Identities=21% Similarity=0.275 Sum_probs=214.8
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCC---------hhHHHHHHHHHHhCCCCeEEEEccCCCHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR---------KTVLRSAVAALHSLGIPAIGLEGDVRKREDA 76 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~---------~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~ 76 (298)
+++.|+||++|||||++|||+++|+.|+++|++|++++++ .+.++++.+++...+ ....+|+++.+++
T Consensus 1 sPm~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~~ 77 (302)
T d1gz6a_ 1 SPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG---GKAVANYDSVEAG 77 (302)
T ss_dssp CCCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTT---CEEEEECCCGGGH
T ss_pred CCcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcc---cccccccchHHHH
Confidence 3567999999999999999999999999999999998654 445666777776543 4467899999999
Q ss_pred HHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecc
Q 022386 77 VRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISA 156 (298)
Q Consensus 77 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss 156 (298)
+++++++.++||+||+||||||+...+++.+.+.++|++++++|+.++++++++++|+|++++ .|+||++||
T Consensus 78 ~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~--------~G~IV~isS 149 (302)
T d1gz6a_ 78 EKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN--------YGRIIMTAS 149 (302)
T ss_dssp HHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--------CEEEEEECC
T ss_pred HHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCC--------CcEEEEeCC
Confidence 999999999999999999999999889999999999999999999999999999999999886 799999999
Q ss_pred cccccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHH
Q 022386 157 TLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDI 236 (298)
Q Consensus 157 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv 236 (298)
..+..+.+....|++||+|+.+|+++++.|++ ++|||||+|+||++.|++ .... +++.. +..+|+|+
T Consensus 150 ~~~~~~~~~~~~Y~asKaal~~lt~~la~E~~-~~gIrVN~I~PG~~~t~~-~~~~-~~~~~----------~~~~Pedv 216 (302)
T d1gz6a_ 150 ASGIYGNFGQANYSAAKLGLLGLANTLVIEGR-KNNIHCNTIAPNAGSRMT-ETVM-PEDLV----------EALKPEYV 216 (302)
T ss_dssp HHHHHCCTTCHHHHHHHHHHHHHHHHHHHHTG-GGTEEEEEEEEECCSTTT-GGGS-CHHHH----------HHSCGGGT
T ss_pred hhhcCCCCCcHHHHHHHHHHHHHHHHHHHHHh-ccCCceeeeCCCCCCcch-hhcC-cHhhH----------hcCCHHHH
Confidence 99999999999999999999999999999998 889999999999996543 2222 22221 24579999
Q ss_pred HHHHHHhcCCCCCCccccEEEeCCCCCCC--------------CCCCCchhHHHhhHHhhh
Q 022386 237 AMAALYLASDAGKYVNGNTLIVDGGNWLS--------------NPRDLPKEAVNQLSRAVE 283 (298)
Q Consensus 237 a~~~~~L~s~~~~~~~G~~i~~dgG~~~~--------------~~~~~~~~~~~~~~~~~~ 283 (298)
|++++||+|+.+ ++||++|.+|||+.-. ...+.+|.+.+.+.+...
T Consensus 217 A~~v~fL~S~~a-~itG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~t~e~i~~~~~~i~d 276 (302)
T d1gz6a_ 217 APLVLWLCHESC-EENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICD 276 (302)
T ss_dssp HHHHHHHTSTTC-CCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTC
T ss_pred HHHHHHHcCCCc-CCCCcEEEeCCCceeEEEEeecCcccccCCCCCCCHHHHHHHHHHHhC
Confidence 999999999765 7899999999995421 123566666666555444
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=9.7e-46 Score=315.44 Aligned_cols=241 Identities=20% Similarity=0.166 Sum_probs=212.0
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHH---cCCcEEEEcCChhHHHHHHHHHHhC--CCCeEEEEccCCCHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGK---HGAAIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVES 82 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~---~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~ 82 (298)
+.|+||+++||||++|||+++|++|++ +|++|++++|+.++++++.+++... +.++.+++||++++++++++++.
T Consensus 2 ~~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~ 81 (259)
T d1oaaa_ 2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA 81 (259)
T ss_dssp CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHH
Confidence 579999999999999999999999996 7999999999999999999999765 45788999999999999999999
Q ss_pred HHH----HhCCccEEEECCCCCC---CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEec
Q 022386 83 TIN----HFGKLDILVNAAAGNF---LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS 155 (298)
Q Consensus 83 ~~~----~~~~id~li~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vs 155 (298)
+.+ .++.+|++|||||... .+++.+.+.++|+++|++|+.++++++++++|+|++++. ..|+||++|
T Consensus 82 ~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~------~~g~Iv~is 155 (259)
T d1oaaa_ 82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPG------LSKTVVNIS 155 (259)
T ss_dssp HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTT------CEEEEEEEC
T ss_pred HHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCC------Ccccccccc
Confidence 876 3468999999999643 456778899999999999999999999999999987541 148999999
Q ss_pred ccccccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc---CChHHHHHHHhhhccCCCCCC
Q 022386 156 ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK---LAPEEIRSKATDYMAAYKFGE 232 (298)
Q Consensus 156 s~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 232 (298)
|..+..+.+.+..|++||+|+.+|+++++.|. +|||||+|+||+++|++.... ...++..+.+....+.+++.+
T Consensus 156 S~~~~~~~~~~~~Y~asKaal~~lt~~la~e~---~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 232 (259)
T d1oaaa_ 156 SLCALQPYKGWGLYCAGKAARDMLYQVLAAEE---PSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVD 232 (259)
T ss_dssp CGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHC---TTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBC
T ss_pred cccccCCCccchHHHHHHHHHHHHHHHHHhCC---CCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCCCCCCC
Confidence 99999999999999999999999999999993 489999999999999864332 234566677777788999999
Q ss_pred HHHHHHHHHHhcCCCCCCccccEEEe
Q 022386 233 KWDIAMAALYLASDAGKYVNGNTLIV 258 (298)
Q Consensus 233 ~~dva~~~~~L~s~~~~~~~G~~i~~ 258 (298)
|+|+|+.+++|+++ .+|+||+.|++
T Consensus 233 p~evA~~i~~ll~~-~s~~TG~~idv 257 (259)
T d1oaaa_ 233 CGTSAQKLLGLLQK-DTFQSGAHVDF 257 (259)
T ss_dssp HHHHHHHHHHHHHH-CCSCTTEEEET
T ss_pred HHHHHHHHHHHhhh-ccCCCCCeEEe
Confidence 99999999999986 47999999986
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=100.00 E-value=3.4e-46 Score=316.69 Aligned_cols=240 Identities=19% Similarity=0.148 Sum_probs=201.0
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC-CCCeEEEEccCC-CHHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIPAIGLEGDVR-KREDAVRVVESTIN 85 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dls-~~~~~~~~~~~~~~ 85 (298)
++|+||++|||||++|||+++|++|+++|++|++++|+.++.++..+..... +.++.++.||++ +.++++++++++.+
T Consensus 1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 80 (254)
T d1sbya1 1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD 80 (254)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence 4699999999999999999999999999999999988877666554444333 346889999998 77899999999999
Q ss_pred HhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC
Q 022386 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~ 165 (298)
++++||+||||||.. +.++|++++++|+.++++++++++|+|.+++. ..+|+||+++|..+..+.+.
T Consensus 81 ~~g~iDilvnnAG~~--------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~-----~~~g~Ii~isS~~~~~~~~~ 147 (254)
T d1sbya1 81 QLKTVDILINGAGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKG-----GPGGIIANICSVTGFNAIHQ 147 (254)
T ss_dssp HHSCCCEEEECCCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGT-----CCCEEEEEECCGGGTSCCTT
T ss_pred HcCCCCEEEeCCCCC--------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhccc-----CCCceEEEEechhhccCCCC
Confidence 999999999999953 44678999999999999999999999987642 22699999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcC
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s 245 (298)
+.+|++||+|+.+|+++++.|++ ++|||||+|+||+|+|++.......++...........++..+|+++|+.++++++
T Consensus 148 ~~~Y~asKaal~~~t~~la~el~-~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~~~~ 226 (254)
T d1sbya1 148 VPVYSASKAAVVSFTNSLAKLAP-ITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIE 226 (254)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHH-HHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHhhcc-ccCeEEEEEEeCCCcCccccccccchhHHHHHHhccccCCCCCHHHHHHHHHHhhh
Confidence 99999999999999999999998 88999999999999998654433322222333333444567799999999988875
Q ss_pred CCCCCccccEEEeCCCCCC
Q 022386 246 DAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 246 ~~~~~~~G~~i~~dgG~~~ 264 (298)
. +.||++|.+|||.+.
T Consensus 227 ~---~~tG~vi~vdgG~l~ 242 (254)
T d1sbya1 227 A---NKNGAIWKLDLGTLE 242 (254)
T ss_dssp H---CCTTCEEEEETTEEE
T ss_pred C---CCCCCEEEECCCEeC
Confidence 3 359999999999753
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-45 Score=309.25 Aligned_cols=219 Identities=16% Similarity=0.191 Sum_probs=199.5
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
.+|+||+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+.++..+.||++|+++++++++.+.+++
T Consensus 3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~ 82 (244)
T d1yb1a_ 3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI 82 (244)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
|++|++|||||.....++.+.+.+.|+++|++|+.|+++++++++|.|.+++ .|+||++||..+..+.+.+.
T Consensus 83 g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~--------~G~Iv~isS~~~~~~~~~~~ 154 (244)
T d1yb1a_ 83 GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN--------HGHIVTVASAAGHVSVPFLL 154 (244)
T ss_dssp CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--------CEEEEEECCCC-CCCHHHHH
T ss_pred CCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcC--------CceEEEeecchhcCCCCCcH
Confidence 9999999999998888888899999999999999999999999999999887 79999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhc--CCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcC
Q 022386 168 HVSAAKAAVDSITRSLALEWG--TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~--~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s 245 (298)
.|++||+|+.+|+++++.|++ ...||+||+|+||+|+|++.... . .+.....+|+++++.+...+.
T Consensus 155 ~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~--~----------~~~~~~~~pe~va~~i~~~~~ 222 (244)
T d1yb1a_ 155 AYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP--S----------TSLGPTLEPEEVVNRLMHGIL 222 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT--H----------HHHCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCc--C----------ccccCCCCHHHHHHHHHHHHh
Confidence 999999999999999999986 12589999999999999864331 1 123456799999999887664
Q ss_pred C
Q 022386 246 D 246 (298)
Q Consensus 246 ~ 246 (298)
.
T Consensus 223 ~ 223 (244)
T d1yb1a_ 223 T 223 (244)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=8.9e-45 Score=309.37 Aligned_cols=246 Identities=21% Similarity=0.230 Sum_probs=218.4
Q ss_pred CCCCcEEEEecCCc--hhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 9 ILKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 9 ~l~gk~~lVtG~t~--giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.|+||++|||||++ |||+++|+.|+++|++|++++|+.+..+.. +++.........+.+|+++..++...++.+.+.
T Consensus 2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (258)
T d1qsga_ 2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV-EEFAAQLGSDIVLQCDVAEDASIDTMFAELGKV 80 (258)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHH-HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHhhcCCcceeecccchHHHHHHHHHHhhhc
Confidence 58999999999998 899999999999999999999986544444 445555566778899999999999999999999
Q ss_pred hCCccEEEECCCCCCCCCC-----CCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc
Q 022386 87 FGKLDILVNAAAGNFLVPA-----EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 161 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~ 161 (298)
++++|++|||++......+ .....+.|...+.+|+.+.+.+++.+.+.+.+ ++.||++||..+..
T Consensus 81 ~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~Ii~iss~~~~~ 150 (258)
T d1qsga_ 81 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP----------GSALLTLSYLGAER 150 (258)
T ss_dssp CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE----------EEEEEEEECGGGTS
T ss_pred ccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccC----------CcEEEEecchhhcc
Confidence 9999999999987544333 23456779999999999999999999999865 46799999999999
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHH
Q 022386 162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241 (298)
Q Consensus 162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~ 241 (298)
+.+....|++||+|+.+|+++++.||+ ++|||||+|+||+|+|++.......+...+......|++|+.+|+|+|+++.
T Consensus 151 ~~~~~~~Y~~sKaal~~ltr~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeia~~v~ 229 (258)
T d1qsga_ 151 AIPNYNVMGLAKASLEANVRYMANAMG-PEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAA 229 (258)
T ss_dssp BCTTTTHHHHHHHHHHHHHHHHHHHHT-TTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHhC-ccCceeecccccccccccccccchhhhHHHHHHhCCCCCCCcCHHHHHHHHH
Confidence 999999999999999999999999998 8899999999999999987766667777788888999999999999999999
Q ss_pred HhcCCCCCCccccEEEeCCCCCCCC
Q 022386 242 YLASDAGKYVNGNTLIVDGGNWLSN 266 (298)
Q Consensus 242 ~L~s~~~~~~~G~~i~~dgG~~~~~ 266 (298)
||+|+.++++||++|.+|||+++..
T Consensus 230 fL~s~~s~~itG~~i~vDGG~~i~g 254 (258)
T d1qsga_ 230 FLCSDLSAGISGEVVHVDGGFSIAA 254 (258)
T ss_dssp HHTSGGGTTCCSCEEEESTTGGGBC
T ss_pred HHhCchhcCccCceEEECcCHHHhc
Confidence 9999999999999999999998753
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=100.00 E-value=1.2e-43 Score=306.33 Aligned_cols=246 Identities=23% Similarity=0.312 Sum_probs=202.3
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCC-hhHHHHHHHHHHhCC-CCeEE-----------------EEccCCCH
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR-KTVLRSAVAALHSLG-IPAIG-----------------LEGDVRKR 73 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~~-~~~~~-----------------~~~Dls~~ 73 (298)
.++|||||++|||+++|++|+++|++|++++++ .+..+++.+++.+.+ ..... +.+|++++
T Consensus 3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~ 82 (284)
T d1e7wa_ 3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF 82 (284)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence 489999999999999999999999999997765 556777777776543 33333 45669999
Q ss_pred HHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHH--------------HHHHhhhHHHHHHHHHHHHHHHhcC
Q 022386 74 EDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFR--------------TVIEIDSVGTFIMCHEALKYLKKGG 139 (298)
Q Consensus 74 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~--------------~~~~~n~~~~~~l~~~~~~~~~~~~ 139 (298)
++++++++++.++||++|+||||||.....++.+.+.++|+ ..|.+|+.+++++++.+.+.+....
T Consensus 83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 162 (284)
T d1e7wa_ 83 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP 162 (284)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhH
Confidence 99999999999999999999999998877777766655543 5799999999999999999876432
Q ss_pred CCCCCCCCCcEEEEecccccccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHH
Q 022386 140 RGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS 219 (298)
Q Consensus 140 ~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~ 219 (298)
.. .....++||+++|.....+.+...+|++||+|+.+|+++++.||+ ++|||||+|+||++.+.. . .+++..+
T Consensus 163 ~~--~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~-~~gIrvN~I~PG~t~~~~---~-~~~~~~~ 235 (284)
T d1e7wa_ 163 AK--HRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELA-PLQIRVNGVGPGLSVLVD---D-MPPAVWE 235 (284)
T ss_dssp GG--GSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBCCGG---G-SCHHHHH
T ss_pred HH--hcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhC-Cccccccccccccccccc---c-CCHHHHH
Confidence 10 112268899999999999999999999999999999999999998 889999999999865432 1 2355666
Q ss_pred HHhhhccC-CCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 220 KATDYMAA-YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 220 ~~~~~~~~-~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
......|. +|+.+|+|+|+++.||+|+.++|+||+.|.+|||++++
T Consensus 236 ~~~~~~pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~ 282 (284)
T d1e7wa_ 236 GHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT 282 (284)
T ss_dssp HHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred HHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence 77777775 89999999999999999999999999999999999885
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.6e-44 Score=301.84 Aligned_cols=240 Identities=22% Similarity=0.326 Sum_probs=205.4
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
+|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++ +.+.....+|+.+.+.++...+.+...+.
T Consensus 2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (248)
T d2o23a1 2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKGKFG 78 (248)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCCcccccccccccccccccccccccccc
Confidence 689999999999999999999999999999999999998888877766 45688899999999999999999999999
Q ss_pred CccEEEECCCCCCC------CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC
Q 022386 89 KLDILVNAAAGNFL------VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA 162 (298)
Q Consensus 89 ~id~li~~ag~~~~------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~ 162 (298)
.+|.+++|++.... .+..+.+.+.|++++++|+.+++++++++.|+|..+... ....+|+||++||..+..+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~--~~~~~G~Ii~isS~~~~~~ 156 (248)
T d2o23a1 79 RVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPD--QGGQRGVIINTASVAAFEG 156 (248)
T ss_dssp CCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCC--TTSCCEEEEEECCTHHHHC
T ss_pred cccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhh--ccCCceEEEEecchhhccC
Confidence 99999999875432 455667889999999999999999999999999865311 1223689999999999999
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccC-CCCCCHHHHHHHHH
Q 022386 163 TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA-YKFGEKWDIAMAAL 241 (298)
Q Consensus 163 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~ 241 (298)
.++...|++||+|+.+|+|+++.|++ ++|||||+|+||+++|++.... +++..+......|+ +|+++|+|||+++.
T Consensus 157 ~~~~~~Y~asKaal~~lt~~la~e~~-~~gIrvN~I~PG~i~T~~~~~~--~~~~~~~~~~~~pl~~R~g~peevA~~v~ 233 (248)
T d2o23a1 157 QVGQAAYSASKGGIVGMTLPIARDLA-PIGIRVMTIAPGLFGTPLLTSL--PEKVCNFLASQVPFPSRLGDPAEYAHLVQ 233 (248)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCCC------------CHHHHTCSSSCSCBCHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhc-ccCcceeeeccCceecchhhcC--CHHHHHHHHhcCCCCCCCcCHHHHHHHHH
Confidence 99999999999999999999999998 8899999999999998865432 34555566667776 89999999999999
Q ss_pred HhcCCCCCCccccEEEe
Q 022386 242 YLASDAGKYVNGNTLIV 258 (298)
Q Consensus 242 ~L~s~~~~~~~G~~i~~ 258 (298)
||++ ++|+|||+|.|
T Consensus 234 fL~s--~~~itGq~I~v 248 (248)
T d2o23a1 234 AIIE--NPFLNGEVIRL 248 (248)
T ss_dssp HHHH--CTTCCSCEEEE
T ss_pred HHHh--CCCCCceEeEC
Confidence 9997 58999999975
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=100.00 E-value=1.3e-43 Score=304.74 Aligned_cols=265 Identities=23% Similarity=0.217 Sum_probs=213.3
Q ss_pred CCCCCcEEEEecCCc--hhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~--giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
..|+||++|||||+| |||+++|+.|+++|++|++++|+. ++++..+++.+.+....+..+|++++++++++++++.+
T Consensus 1 g~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~-~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 79 (274)
T d2pd4a1 1 GFLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE-SLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKK 79 (274)
T ss_dssp CTTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CcCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHH
Confidence 368999999999765 999999999999999999999985 45556677777777888899999999999999999999
Q ss_pred HhCCccEEEECCCCCCCC----CCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc
Q 022386 86 HFGKLDILVNAAAGNFLV----PAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 161 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~~----~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~ 161 (298)
.++++|++|||+|..... ...+.....+...+.++..+.+...+.+.+.+.. ++.|+++++.....
T Consensus 80 ~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~i~~~s~~~~~~ 149 (274)
T d2pd4a1 80 DLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN----------GASVLTLSYLGSTK 149 (274)
T ss_dssp HTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE----------EEEEEEEECGGGTS
T ss_pred HcCCCCeEEeecccccccccccccccccchhhhhhhcccccccccccccccccccc----------Ccceeeeccccccc
Confidence 999999999999975442 2223334444444444444444444444333221 35566777777777
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHH
Q 022386 162 ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAAL 241 (298)
Q Consensus 162 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~ 241 (298)
+.+....|+++|+|+.+++++++.|++ ++|||||+|+||+++|++.......++.........|.+|+.+|+|+|+.++
T Consensus 150 ~~~~~~~y~asK~al~~ltr~lA~e~~-~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedIA~~v~ 228 (274)
T d2pd4a1 150 YMAHYNVMGLAKAALESAVRYLAVDLG-KHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGM 228 (274)
T ss_dssp BCTTCHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHH
T ss_pred ccccchhhhHHHHHHHHHHHhhHHHhc-CcCceecccccCcccCccccccCchHHHHHHHhhhhhccCCcCHHHHHHHHH
Confidence 778889999999999999999999998 8899999999999999877666666777778888899999999999999999
Q ss_pred HhcCCCCCCccccEEEeCCCCCC-CCCC-CCchhHHHhhHHhhhh
Q 022386 242 YLASDAGKYVNGNTLIVDGGNWL-SNPR-DLPKEAVNQLSRAVER 284 (298)
Q Consensus 242 ~L~s~~~~~~~G~~i~~dgG~~~-~~~~-~~~~~~~~~~~~~~~~ 284 (298)
||+|+.++++||+.|.+|||+++ ..+. ...+..-..+|..+++
T Consensus 229 fL~S~~s~~itG~~i~vDGG~~~~g~~~~~~~~~~~~~~~~~~~~ 273 (274)
T d2pd4a1 229 YLLSSLSSGVSGEVHFVDAGYHVMGMGAVEEKDNKATLLWDLHKE 273 (274)
T ss_dssp HHHSGGGTTCCSCEEEESTTGGGBSSCCCTTCTTTTCCHHHHSSC
T ss_pred HHhChhhCCCcCceEEECCChhhccCCcccccccchhhhhhhhcc
Confidence 99999999999999999999987 3333 5666666677776654
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=5.8e-44 Score=314.37 Aligned_cols=244 Identities=21% Similarity=0.222 Sum_probs=204.0
Q ss_pred CCcEEEEec--CCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC-C-----------CCeEEE----------
Q 022386 11 KGKVALLTG--GGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-G-----------IPAIGL---------- 66 (298)
Q Consensus 11 ~gk~~lVtG--~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~-----------~~~~~~---------- 66 (298)
++|++|||| +++|||+++|+.|+++|++|++++++.............. . ......
T Consensus 1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (329)
T d1uh5a_ 1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN 80 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence 479999999 6689999999999999999999998876555444433221 0 011222
Q ss_pred ----------EccCCCHHHHHHHHHHHHHHhCCccEEEECCCCCC--CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHH
Q 022386 67 ----------EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 134 (298)
Q Consensus 67 ----------~~Dls~~~~~~~~~~~~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 134 (298)
.+|+++.++++++++.+.+.||+||++|||+|... .+++.+.+.++|.+.+++|+.+++.++|+++|+
T Consensus 81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~ 160 (329)
T d1uh5a_ 81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI 160 (329)
T ss_dssp GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhh
Confidence 24677888999999999999999999999999754 357788999999999999999999999999999
Q ss_pred HHhcCCCCCCCCCCcEEEEecccccccCCCC-chhhHHHHHHHHHHHHHHHHHhcCC-CCeEEEEEeCCcccCCcccC--
Q 022386 135 LKKGGRGQASSSSGGIIINISATLHYTATWY-QIHVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTAGVS-- 210 (298)
Q Consensus 135 ~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~-~~~Y~~sK~a~~~l~~~la~e~~~~-~girv~~i~PG~v~t~~~~~-- 210 (298)
|++ +|+||++||..+..+.|. ...|++||+|+++|+|+++.||+ + +|||||+|+||+++|+....
T Consensus 161 m~~----------~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela-~~~gIRVNaI~PG~i~T~a~~~i~ 229 (329)
T d1uh5a_ 161 MKP----------QSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLG-RNYNIRINTISAGPLKSRAATAIN 229 (329)
T ss_dssp EEE----------EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHH-HHHCCEEEEEEECCCCCTTGGGCC
T ss_pred ccc----------ccccccceeehhcccccccchhhhhhhccccccchhhHHHHh-cccCcEEEEEecCcccchhhhccc
Confidence 965 588999999999888776 56799999999999999999997 5 59999999999999842111
Q ss_pred -----------------------------------------cCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCCC
Q 022386 211 -----------------------------------------KLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGK 249 (298)
Q Consensus 211 -----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~ 249 (298)
....++..+......|++|+.+|+|||++++||+|+.++
T Consensus 230 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pedvA~~v~fLaSd~s~ 309 (329)
T d1uh5a_ 230 KLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESR 309 (329)
T ss_dssp ------------------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGT
T ss_pred chhhhhhhhhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCchhC
Confidence 112355666777888999999999999999999999999
Q ss_pred CccccEEEeCCCCCCC
Q 022386 250 YVNGNTLIVDGGNWLS 265 (298)
Q Consensus 250 ~~~G~~i~~dgG~~~~ 265 (298)
++||+.|.+|||+++.
T Consensus 310 ~iTGq~i~VDGG~~~~ 325 (329)
T d1uh5a_ 310 AITGQTIYVDNGLNIM 325 (329)
T ss_dssp TCCSCEEEESTTGGGC
T ss_pred CccCCeEEECCCcccc
Confidence 9999999999999874
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.3e-43 Score=302.51 Aligned_cols=232 Identities=22% Similarity=0.257 Sum_probs=189.2
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEE---cCChhH---HHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIM---GRRKTV---LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~---~r~~~~---~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
.|++|||||++|||+++|+.|+++|++|+++ .|+.+. +.+..+.+...+.++.++.||++|+++++++++++.+
T Consensus 2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 81 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence 5899999999999999999999999986544 555433 3444455555678899999999999999999988743
Q ss_pred HhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC
Q 022386 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~ 165 (298)
+.+|++|||+|.....++.+.+.++|++.+++|+.|+++++++++|+|++++ .|+||++||..+..+.+.
T Consensus 82 --g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~--------~G~Iv~isS~~g~~~~~~ 151 (285)
T d1jtva_ 82 --GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG--------SGRVLVTGSVGGLMGLPF 151 (285)
T ss_dssp --SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEEEEGGGTSCCTT
T ss_pred --cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcC--------CCceEEEechhhcCCCCC
Confidence 8999999999998889999999999999999999999999999999999876 799999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHH---------HHHHH------hhhccCCCC
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEE---------IRSKA------TDYMAAYKF 230 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~---------~~~~~------~~~~~~~~~ 230 (298)
...|++||+|+.+|+++++.|++ ++|||||+|+||+|+|++.......++ ....+ ....+..+.
T Consensus 152 ~~~Y~asKaal~~l~~~la~El~-~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (285)
T d1jtva_ 152 NDVYCASKFALEGLCESLAVLLL-PFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAA 230 (285)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred chHHHHHHHHHHHHHHHHHHHhh-ccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccC
Confidence 99999999999999999999998 889999999999999987654432211 11111 122344568
Q ss_pred CCHHHHHHHHHHhcCCCC---CCcccc
Q 022386 231 GEKWDIAMAALYLASDAG---KYVNGN 254 (298)
Q Consensus 231 ~~~~dva~~~~~L~s~~~---~~~~G~ 254 (298)
.+|+|||+.+++++..+. .|++|+
T Consensus 231 ~~PeeVA~~v~~~~~~~~p~~ry~~g~ 257 (285)
T d1jtva_ 231 QNPEEVAEVFLTALRAPKPTLRYFTTE 257 (285)
T ss_dssp BCHHHHHHHHHHHHHCSSCCSEEESCS
T ss_pred CCHHHHHHHHHHHHhCCCCCeEEecHH
Confidence 899999999999996543 455554
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=100.00 E-value=6.3e-43 Score=303.77 Aligned_cols=249 Identities=24% Similarity=0.244 Sum_probs=203.9
Q ss_pred CCCCCCCcEEEEecCCc--hhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC---------C--CCe-EEEEcc--
Q 022386 6 KGDILKGKVALLTGGGS--GIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL---------G--IPA-IGLEGD-- 69 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~--giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~---------~--~~~-~~~~~D-- 69 (298)
++.+|+||++|||||++ |||+++|+.|+++|++|++++|+.............. + ... ....+|
T Consensus 2 ~~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (297)
T d1d7oa_ 2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAV 81 (297)
T ss_dssp CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTT
T ss_pred CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence 35689999999999875 9999999999999999999998764333322222111 0 011 122233
Q ss_pred ------------------CCCHHHHHHHHHHHHHHhCCccEEEECCCCCC--CCCCCCCCHHHHHHHHHhhhHHHHHHHH
Q 022386 70 ------------------VRKREDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCH 129 (298)
Q Consensus 70 ------------------ls~~~~~~~~~~~~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 129 (298)
.++..+++++++.+.++||++|++|||||... ..++.+.+.++|++.+++|+.+++++++
T Consensus 82 ~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~ 161 (297)
T d1d7oa_ 82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS 161 (297)
T ss_dssp CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhh
Confidence 34556778999999999999999999999753 4678889999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCCcEEEEecccccc-cCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcc
Q 022386 130 EALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG 208 (298)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~-~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~ 208 (298)
++++.+.++ |.++++++.... ...+....|+++|+++..+++.++.|++.++|||||+|+||+++|++.
T Consensus 162 ~~~~~~~~~----------g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~ 231 (297)
T d1d7oa_ 162 HFLPIMNPG----------GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAA 231 (297)
T ss_dssp HHGGGEEEE----------EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCS
T ss_pred HHHHHhhcC----------CcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhh
Confidence 999988763 556666555544 344667789999999999999999999524699999999999999987
Q ss_pred cCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCC
Q 022386 209 VSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
......++..+......|++|+.+|+|+|++++||+|+.++|+||++|.+|||+++
T Consensus 232 ~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~s~ 287 (297)
T d1d7oa_ 232 KAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNS 287 (297)
T ss_dssp SCCSHHHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred hhccCCHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCHhh
Confidence 66656677888888999999999999999999999999999999999999999886
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=100.00 E-value=9.1e-41 Score=285.49 Aligned_cols=245 Identities=24% Similarity=0.321 Sum_probs=202.1
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhH-HHHHHHHHHhC-CCCeEEEEccCC----CHHHHHHHHHHHHHH
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-LRSAVAALHSL-GIPAIGLEGDVR----KREDAVRVVESTINH 86 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~-~~~~~~~~~~~-~~~~~~~~~Dls----~~~~~~~~~~~~~~~ 86 (298)
.|+|||||++|||+++|++|+++|++|++++|+.++ .+++.+++... +.+.....+|+. .++.++++++.+.++
T Consensus 2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (266)
T d1mxha_ 2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA 81 (266)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence 489999999999999999999999999999998654 56677777654 566777766554 467788999999999
Q ss_pred hCCccEEEECCCCCCCCCCCC-----------CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEec
Q 022386 87 FGKLDILVNAAAGNFLVPAED-----------LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS 155 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~-----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vs 155 (298)
||++|++|||||+....++.+ ...+.+...+..|+.+.+...+...+.+...... ....+.+++++
T Consensus 82 ~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 158 (266)
T d1mxha_ 82 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAW---RSRNLSVVNLC 158 (266)
T ss_dssp HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC----------CCCEEEEEEC
T ss_pred hCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhcccccccccc---ccccccchhhh
Confidence 999999999999865544322 2245677888999999999998888877654321 12357889999
Q ss_pred ccccccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCC-CCCHH
Q 022386 156 ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK-FGEKW 234 (298)
Q Consensus 156 s~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 234 (298)
+..+..+.+....|++||+|+++|+++++.|++ ++|||||+|+||+++|+.. .+++..+.+.+..|+++ +.+|+
T Consensus 159 ~~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~-~~gIrVN~I~PG~i~t~~~----~~~~~~~~~~~~~pl~r~~~~pe 233 (266)
T d1mxha_ 159 DAMTDLPLPGFCVYTMAKHALGGLTRAAALELA-PRHIRVNAVAPGLSLLPPA----MPQETQEEYRRKVPLGQSEASAA 233 (266)
T ss_dssp CGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEESSBSCCSS----SCHHHHHHHHTTCTTTSCCBCHH
T ss_pred hccccccCcchhhhhhhHHHHhhhHHHHHHHhC-ccCcEEEEeccCcEecccc----CCHHHHHHHHhcCCCCCCCCCHH
Confidence 999999999999999999999999999999998 8899999999999998743 23566677778888855 58999
Q ss_pred HHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 235 DIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 235 dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
|+|++++||+|+.++|+||++|.+|||+++.
T Consensus 234 eva~~v~fL~s~~s~~itG~~i~vDGG~~l~ 264 (266)
T d1mxha_ 234 QIADAIAFLVSKDAGYITGTTLKVDGGLILA 264 (266)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred HHHHHHHHHhCchhCCccCCeEEECccHhhh
Confidence 9999999999999999999999999999885
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.9e-42 Score=295.49 Aligned_cols=218 Identities=24% Similarity=0.299 Sum_probs=191.1
Q ss_pred cEEEEecCCchhHHHHHHHHHHc-CCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 13 KVALLTGGGSGIGFEISLQLGKH-GAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
+++|||||++|||+++|++|+++ |++|++++|+.++++++.+++.+.+.++.+++||++|.++++++++++.+++++||
T Consensus 4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iD 83 (275)
T d1wmaa1 4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLD 83 (275)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcE
Confidence 46699999999999999999986 89999999999999999999999999999999999999999999999999999999
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC--------
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-------- 163 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~-------- 163 (298)
+||||||+.......+.+.++|+.+|++|+.+++++++.++|+|++ .|+||+++|..+..+.
T Consensus 84 iLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~----------~g~ivnisS~~~~~~~~~~~~y~~ 153 (275)
T d1wmaa1 84 VLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP----------QGRVVNVSSIMSVRALKSCSPELQ 153 (275)
T ss_dssp EEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE----------EEEEEEECCHHHHHHHHTSCHHHH
T ss_pred EEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------cCCcccccccceeccccccchhhh
Confidence 9999999987778888888999999999999999999999999965 4899999997654221
Q ss_pred ---------------------------------CCchhhHHHHHHHHHHHHHHHHHhc---CCCCeEEEEEeCCcccCCc
Q 022386 164 ---------------------------------WYQIHVSAAKAAVDSITRSLALEWG---TDYAIRVNGIAPGPIKDTA 207 (298)
Q Consensus 164 ---------------------------------~~~~~Y~~sK~a~~~l~~~la~e~~---~~~girv~~i~PG~v~t~~ 207 (298)
.+...|++||+++..|++.+++||+ ...||+||+|+||+|+|++
T Consensus 154 ~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m 233 (275)
T d1wmaa1 154 QKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM 233 (275)
T ss_dssp HHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTT
T ss_pred hhhcccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCc
Confidence 1235799999999999999999985 1358999999999999986
Q ss_pred ccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhc--CCCCCCccccEEE
Q 022386 208 GVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA--SDAGKYVNGNTLI 257 (298)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~--s~~~~~~~G~~i~ 257 (298)
.... ...+|+|+|+.++|++ +++....+|+.+.
T Consensus 234 ~~~~-----------------~~~~pee~A~~~~~~a~~~~~~~~~~G~~~~ 268 (275)
T d1wmaa1 234 AGPK-----------------ATKSPEEGAETPVYLALLPPDAEGPHGQFVS 268 (275)
T ss_dssp TCTT-----------------CSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred ccCc-----------------ccCCHHHHHHHHHHHHcCChhhcCCCeEEEE
Confidence 5332 2448999999999986 4556678898775
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1.1e-40 Score=280.91 Aligned_cols=234 Identities=25% Similarity=0.350 Sum_probs=194.0
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
.|++|||||++|||+++|++|+++|++|++++|+.+ +.+...+++|+++......+.......+. .+
T Consensus 1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~-~~ 67 (241)
T d1uaya_ 1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE------------GEDLIYVEGDVTREEDVRRAVARAQEEAP-LF 67 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC------------SSSSEEEECCTTCHHHHHHHHHHHHHHSC-EE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc------------cccceEeeccccchhhhHHHHHhhhcccc-cc
Confidence 489999999999999999999999999999999864 34577889999999999999888776644 45
Q ss_pred EEEECCCCCC----CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 92 ILVNAAAGNF----LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 92 ~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
.++++++... .......+.+.|++.+++|+.+++.+++.+.+.+..... ......|+||++||..+..+.+...
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~~~~~G~Ii~isS~~~~~~~~~~~ 145 (241)
T d1uaya_ 68 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPP--DAEGQRGVIVNTASVAAFEGQIGQA 145 (241)
T ss_dssp EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCC--CTTSCSEEEEEECCTHHHHCCTTCH
T ss_pred chhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhh--hcccCceeeeeecchhhccCCCCch
Confidence 5666665322 244455678999999999999999999999999765421 1123379999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhcc-CCCCCCHHHHHHHHHHhcCC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA-AYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~~~~L~s~ 246 (298)
.|++||+|+.+|+|+++.|++ ++|||||+|+||+++|++..... ++..+......+ .+|+.+|+|+|+++.||+|
T Consensus 146 ~Y~asKaal~~lt~~lA~ela-~~gIrVN~V~PG~i~T~~~~~~~--~~~~~~~~~~~~~~~R~g~pedvA~~v~fL~s- 221 (241)
T d1uaya_ 146 AYAASKGGVVALTLPAARELA-GWGIRVVTVAPGLFDTPLLQGLP--EKAKASLAAQVPFPPRLGRPEEYAALVLHILE- 221 (241)
T ss_dssp HHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSCSSHHHHTSC--HHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHH-
T ss_pred hhHHHHHHHHHHHHHHHHHHh-hcCCceeeecCCcccccccchhh--hhHHHHHHhcCCCCCCCcCHHHHHHHHHHHHh-
Confidence 999999999999999999998 88999999999999988654432 333334444444 4899999999999999998
Q ss_pred CCCCccccEEEeCCCCCCC
Q 022386 247 AGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 247 ~~~~~~G~~i~~dgG~~~~ 265 (298)
++|+||+.|.+|||.++.
T Consensus 222 -~~~iTG~~i~VDGG~~m~ 239 (241)
T d1uaya_ 222 -NPMLNGEVVRLDGALRMA 239 (241)
T ss_dssp -CTTCCSCEEEESTTCCCC
T ss_pred -CCCCCCCEEEECCcccCC
Confidence 479999999999998875
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=100.00 E-value=1.4e-40 Score=281.53 Aligned_cols=232 Identities=19% Similarity=0.171 Sum_probs=185.7
Q ss_pred CcEEEEecCCchhHHHHHHHHH---HcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH--H
Q 022386 12 GKVALLTGGGSGIGFEISLQLG---KHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN--H 86 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~---~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~--~ 86 (298)
-|+||||||++|||+++|+.|+ ++|++|++++|+.++++++.+ +.+.+.++.++.||++|+++++++++.+.+ .
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~ 80 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAKNHSNIHILEIDLRNFDAYDKLVADIEGVTK 80 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHH-HHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHG
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-HHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhh
Confidence 3899999999999999999997 479999999999988877654 444467899999999999999999999854 6
Q ss_pred hCCccEEEECCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCC---CCCCCCCCcEEEEecccccccC
Q 022386 87 FGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR---GQASSSSGGIIINISATLHYTA 162 (298)
Q Consensus 87 ~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~---~~~~~~~~g~iv~vss~~~~~~ 162 (298)
++++|+||||||+... .++.+.+.++|++++++|+.++++++++++|+|+++.. .......+|++|+++|..+...
T Consensus 81 ~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~ 160 (248)
T d1snya_ 81 DQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQ 160 (248)
T ss_dssp GGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCST
T ss_pred cCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccC
Confidence 7999999999998544 46778899999999999999999999999999987532 1122334799999999887643
Q ss_pred ---CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHH
Q 022386 163 ---TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239 (298)
Q Consensus 163 ---~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (298)
.+.+.+|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++.....+ ......++++++.
T Consensus 161 ~~~~~~~~~Y~aSKaal~~lt~~la~e~~-~~gI~vn~v~PG~v~T~m~~~~~~-------------~~~~~~~~~i~~~ 226 (248)
T d1snya_ 161 GNTDGGMYAYRTSKSALNAATKSLSVDLY-PQRIMCVSLHPGWVKTDMGGSSAP-------------LDVPTSTGQIVQT 226 (248)
T ss_dssp TCCSCCCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEECCCSBCSTTTCTTCS-------------BCHHHHHHHHHHH
T ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEcCCCcccCCcccccCC-------------CCchHHHHHHHHH
Confidence 45678999999999999999999998 889999999999999987544321 1000112233444
Q ss_pred HHHhcCCCCCCccccEEEeCCCC
Q 022386 240 ALYLASDAGKYVNGNTLIVDGGN 262 (298)
Q Consensus 240 ~~~L~s~~~~~~~G~~i~~dgG~ 262 (298)
+.++. ...+|+.|++||+.
T Consensus 227 i~~l~----~~~tG~~i~~dG~~ 245 (248)
T d1snya_ 227 ISKLG----EKQNGGFVNYDGTP 245 (248)
T ss_dssp HHHCC----GGGTTCEECTTSCB
T ss_pred HHhcC----ccCCCcEEEECCeE
Confidence 44433 34589999999873
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=100.00 E-value=1.8e-40 Score=284.06 Aligned_cols=244 Identities=23% Similarity=0.205 Sum_probs=201.4
Q ss_pred CCCCCcEEEEec--CCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTG--GGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 8 ~~l~gk~~lVtG--~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
..|+||++|||| +++|||+++|++|+++|++|++++|+.+++.+. .....+.+...++||++++++++++++.+.+
T Consensus 2 ~~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~--~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~ 79 (268)
T d2h7ma1 2 GLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQR--ITDRLPAKAPLLELDVQNEEHLASLAGRVTE 79 (268)
T ss_dssp CTTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHH--HHTTSSSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHH--HHHHcCCceeeEeeecccccccccccchhhh
Confidence 579999999999 467999999999999999999999997654322 1223466788899999999999999999987
Q ss_pred Hh---CCccEEEECCCCCC-----CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccc
Q 022386 86 HF---GKLDILVNAAAGNF-----LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 157 (298)
Q Consensus 86 ~~---~~id~li~~ag~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~ 157 (298)
.+ +.+|++|||+|+.. ..++.+.+.+.|...+.+|+.+.+...+.+.+.+.. +.+++++|.
T Consensus 80 ~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~i~~~s~ 148 (268)
T d2h7ma1 80 AIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP-----------GGSIVGMDF 148 (268)
T ss_dssp HHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-----------EEEEEEEEC
T ss_pred ccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccc-----------ccccccccc
Confidence 75 67999999999653 235567788999999999999999999888776543 446666677
Q ss_pred ccccCCCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC----C------hHHHHHHHhhhccC
Q 022386 158 LHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL----A------PEEIRSKATDYMAA 227 (298)
Q Consensus 158 ~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~----~------~~~~~~~~~~~~~~ 227 (298)
....+.|.+..|+++|+|+.+|+++++.|++ ++|||||+|+||+++|++..... . .+...+......|+
T Consensus 149 ~~~~~~p~~~~y~~sK~a~~~ltr~lA~e~~-~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl 227 (268)
T d2h7ma1 149 DPSRAMPAYNWMTVAKSALESVNRFVAREAG-KYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPI 227 (268)
T ss_dssp CCSSCCTTTHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTT
T ss_pred cccccCcccchhhccccchhhccccchhhhh-ccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCC
Confidence 7777888899999999999999999999998 88999999999999987543211 1 12333445566776
Q ss_pred CC-CCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 228 YK-FGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 228 ~~-~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
++ +.+|+|+|+++.||+|+.++++||+.|.+|||++.+
T Consensus 228 ~rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~~~~ 266 (268)
T d2h7ma1 228 GWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHTQ 266 (268)
T ss_dssp CCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGGGC
T ss_pred CCCCCCHHHHHHHHHHHhCchhcCccCCEEEECcCcccc
Confidence 55 999999999999999999999999999999999865
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.3e-40 Score=279.61 Aligned_cols=239 Identities=21% Similarity=0.265 Sum_probs=204.4
Q ss_pred CCCCCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHh-CCCCeEEEEccCCCHHHHHHHH
Q 022386 2 ESPFKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVV 80 (298)
Q Consensus 2 ~~~~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dls~~~~~~~~~ 80 (298)
++++.+.+|+||++|||||++|||+++|+.|+++|++|++++|+.++++++.+++.. .+..+..+.+|+++.++++...
T Consensus 4 ~~~f~~~~L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 83 (269)
T d1xu9a_ 4 NEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFV 83 (269)
T ss_dssp SSCCCGGGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHH
T ss_pred CccCCccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHH
Confidence 456778889999999999999999999999999999999999999999999888765 4567888999999999999999
Q ss_pred HHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccc
Q 022386 81 ESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 160 (298)
Q Consensus 81 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~ 160 (298)
+.+.+.++.+|++|||||.....++.+.+.++|++++++|+.+++++++.++|+|+++ +|+||+++|..+.
T Consensus 84 ~~~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~---------~G~ii~isS~~~~ 154 (269)
T d1xu9a_ 84 AQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS---------NGSIVVVSSLAGK 154 (269)
T ss_dssp HHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH---------TCEEEEEEEGGGT
T ss_pred HHHHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc---------CCcceEeccchhc
Confidence 9999999999999999999888888899999999999999999999999999999865 5899999999999
Q ss_pred cCCCCchhhHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHH
Q 022386 161 TATWYQIHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMA 239 (298)
Q Consensus 161 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~-~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (298)
.+.+....|++||+|+.+|+++++.|++ ...||+||+|+||+|+|++....... .+.....+++++++.
T Consensus 155 ~~~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~~~----------~~~~~~~~~e~~a~~ 224 (269)
T d1xu9a_ 155 VAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSG----------IVHMQAAPKEECALE 224 (269)
T ss_dssp SCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCG----------GGGGGCBCHHHHHHH
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhccC----------CccccCCCHHHHHHH
Confidence 9999999999999999999999999986 23579999999999999754332211 122235689999998
Q ss_pred HHHhcCCCCCCccccEEEeCCCCCC
Q 022386 240 ALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 240 ~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
+....... ...+..+...|+
T Consensus 225 i~~~~~~~-----~~~i~~~~~~~~ 244 (269)
T d1xu9a_ 225 IIKGGALR-----QEEVYYDSSLWT 244 (269)
T ss_dssp HHHHHHTT-----CSEEEECSCHHH
T ss_pred HHHHhhcC-----CCEEEccHHHHH
Confidence 87655322 234455555443
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=4.2e-39 Score=272.72 Aligned_cols=231 Identities=18% Similarity=0.178 Sum_probs=184.2
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCC--cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
|+.|+||||||++|||+++|++|+++|+ .|++++|+.++++++.+ ..+.++.+++||++++++++++++.+.+.+
T Consensus 1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~---~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~ 77 (250)
T d1yo6a1 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS---IKDSRVHVLPLTVTCDKSLDTFVSKVGEIV 77 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT---CCCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHH---hhCCceEEEEEecCCHHHHHHHHHHHHHHh
Confidence 4569999999999999999999999997 58888999877665432 235679999999999999999999999987
Q ss_pred C--CccEEEECCCCCC-CCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCC---CCCCCCCCcEEEEeccccccc
Q 022386 88 G--KLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR---GQASSSSGGIIINISATLHYT 161 (298)
Q Consensus 88 ~--~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~---~~~~~~~~g~iv~vss~~~~~ 161 (298)
+ .+|++|||||+.. ..++.+.+.++|+++|++|+.|++++++.++|+|+++.. ........++++++++.....
T Consensus 78 ~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~ 157 (250)
T d1yo6a1 78 GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSI 157 (250)
T ss_dssp GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCS
T ss_pred CCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccc
Confidence 6 4999999999754 477788899999999999999999999999999987632 223334468899998876654
Q ss_pred CC-------CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHH
Q 022386 162 AT-------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKW 234 (298)
Q Consensus 162 ~~-------~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (298)
.. .+..+|++||+|+.+|+++++.|++ ++||+||+|+||+|+|++.... ...+|+
T Consensus 158 ~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~-~~gI~v~~i~PG~v~T~m~~~~-----------------~~~~~e 219 (250)
T d1yo6a1 158 TDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLK-DDNVLVVNFCPGWVQTNLGGKN-----------------AALTVE 219 (250)
T ss_dssp TTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTG-GGTCEEEEEECCCC------------------------------H
T ss_pred cCCcccccchhHHHHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEecCCCCCCCCCCC-----------------CCCCHH
Confidence 32 3456799999999999999999998 8899999999999999864221 134788
Q ss_pred HHHHHHHHhcCCCCCCccccEEEeCCC
Q 022386 235 DIAMAALYLASDAGKYVNGNTLIVDGG 261 (298)
Q Consensus 235 dva~~~~~L~s~~~~~~~G~~i~~dgG 261 (298)
+.+..++..+.......+|+.++.||.
T Consensus 220 ~~a~~~~~~~~~~~~~~sG~f~~~~g~ 246 (250)
T d1yo6a1 220 QSTAELISSFNKLDNSHNGRFFMRNLK 246 (250)
T ss_dssp HHHHHHHHHHTTCCGGGTTCEEETTEE
T ss_pred HHHHHHHHHHhcCCCCCCeEEECCCCe
Confidence 888888888876666688999988763
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=5.6e-40 Score=275.72 Aligned_cols=223 Identities=16% Similarity=0.082 Sum_probs=187.8
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC--
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG-- 88 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~-- 88 (298)
+||++|||||++|||+++|+.|+++|++|++++++..+ .........+|.++.++.+.+.+.+.+.++
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENE----------EASASVIVKMTDSFTEQADQVTAEVGKLLGDQ 70 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCT----------TSSEEEECCCCSCHHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccc----------cccccceeecccCcHHHHHHHHHHHHHHhCCC
Confidence 58999999999999999999999999999999887542 122345667888889999988888877654
Q ss_pred CccEEEECCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 89 KLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 89 ~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
++|++|||||.... ....+.+.++|++.|++|+.++++++++++|+|++ +|+||++||..+..+.+...
T Consensus 71 ~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~----------~G~Iv~isS~~~~~~~~~~~ 140 (236)
T d1dhra_ 71 KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE----------GGLLTLAGAKAALDGTPGMI 140 (236)
T ss_dssp CEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE----------EEEEEEECCGGGGSCCTTBH
T ss_pred CceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc----------ccceeEEccHHHcCCccCCc
Confidence 79999999996544 45566677999999999999999999999999965 58999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcC-CCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 168 HVSAAKAAVDSITRSLALEWGT-DYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~-~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
+|++||+|+.+|+++++.|++. +.|||||+|+||+++|++.....+. ....++.+|+++++.+.+|+++
T Consensus 141 ~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~~----------~~~~~~~~pe~va~~~~~l~s~ 210 (236)
T d1dhra_ 141 GYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPE----------ADFSSWTPLEFLVETFHDWITG 210 (236)
T ss_dssp HHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTT----------SCGGGSEEHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCcc----------chhhcCCCHHHHHHHHHHHhCC
Confidence 9999999999999999999962 4699999999999999764332221 2335577899999999999999
Q ss_pred CCCCccccEEEe--CCCCC
Q 022386 247 AGKYVNGNTLIV--DGGNW 263 (298)
Q Consensus 247 ~~~~~~G~~i~~--dgG~~ 263 (298)
.+.+++|+.|.+ ++|.+
T Consensus 211 ~~~~i~G~~i~v~~~~g~t 229 (236)
T d1dhra_ 211 NKRPNSGSLIQVVTTDGKT 229 (236)
T ss_dssp TTCCCTTCEEEEEEETTEE
T ss_pred CccCCCCCeEEEEEECCEE
Confidence 999999997765 44443
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=100.00 E-value=1.5e-37 Score=264.12 Aligned_cols=219 Identities=21% Similarity=0.280 Sum_probs=166.0
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH-hCCcc
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH-FGKLD 91 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~-~~~id 91 (298)
|++|||||++|||+++|++|+++|++|++++|+.++ ..+|+++.+..+....+...+ .+.+|
T Consensus 2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-----------------~~~d~~~~~~~~~~~~~~~~~~~~~id 64 (257)
T d1fjha_ 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-----------------VIADLSTAEGRKQAIADVLAKCSKGMD 64 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-----------------EECCTTSHHHHHHHHHHHHTTCTTCCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-----------------HHHHhcCHHHHHHHHHHHHHHhCCCCc
Confidence 899999999999999999999999999999997542 467999999988887666555 46899
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccc--------------
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT-------------- 157 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~-------------- 157 (298)
++|||||+... .+.+...+.+|..+...+.+.+.+.+.+.. ...+.++.+.
T Consensus 65 ~lv~~Ag~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 129 (257)
T d1fjha_ 65 GLVLCAGLGPQ-------TKVLGNVVSVNYFGATELMDAFLPALKKGH--------QPAAVVISSVASAHLAFDKNPLAL 129 (257)
T ss_dssp EEEECCCCCTT-------CSSHHHHHHHHTHHHHHHHHHHHHHHHTSS--------SCEEEEECCGGGGSSCGGGCTTHH
T ss_pred EEEEcCCCCCc-------HHHHHHHHHHHHHHHHHHHHHhhhhhhhhc--------cCcceeeeeccccchhhhhhhhhh
Confidence 99999986432 234677889999999999999999988765 3344444433
Q ss_pred -------------ccccCC-CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhh
Q 022386 158 -------------LHYTAT-WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD 223 (298)
Q Consensus 158 -------------~~~~~~-~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~ 223 (298)
.+..+. +...+|++||+|+.+|+|+++.||+ ++|||||+|+||+++|++......+++..+....
T Consensus 130 ~~~~g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~ 208 (257)
T d1fjha_ 130 ALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWG-EAGVRLNTIAPGATETPLLQAGLQDPRYGESIAK 208 (257)
T ss_dssp HHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHH-HTTCEEEEEEECC---------------------
T ss_pred hccCCcEEEEeeehhccCCCcchHHHHHHhhhhhccccccccccc-cccccccccccCCcCChhHHhhcCCHHHHHHHHh
Confidence 222222 2345799999999999999999998 8899999999999999887665555554444433
Q ss_pred -hccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCC
Q 022386 224 -YMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWL 264 (298)
Q Consensus 224 -~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~ 264 (298)
..|++|+.+|+|+|+++.||+|+.++++||+.|.+|||++.
T Consensus 209 ~~~PlgR~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG~ta 250 (257)
T d1fjha_ 209 FVPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDA 250 (257)
T ss_dssp CCCSTTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred cCCCCCCCcCHHHHHHHHHHHhCchhCCccCceEEeCCCccc
Confidence 46999999999999999999999999999999999999764
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=2.9e-37 Score=258.94 Aligned_cols=222 Identities=18% Similarity=0.115 Sum_probs=181.1
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH--hCC
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH--FGK 89 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~--~~~ 89 (298)
+++||||||++|||+++|++|+++|++|++++|+..+. ......+.+|..+.++.....+.+... +++
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 71 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ----------ADSNILVDGNKNWTEQEQSILEQTASSLQGSQ 71 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT----------SSEEEECCTTSCHHHHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc----------ccccceeccccCchhHHHHHHHHHHHHhcCCC
Confidence 34579999999999999999999999999999986421 123445668888888877777776664 589
Q ss_pred ccEEEECCCCCCC-CCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchh
Q 022386 90 LDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (298)
Q Consensus 90 id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~ 168 (298)
||+||||||+... .+..+.+.+.|+.++++|+.++++++++++|+|++ +|+||++||..+..+.+....
T Consensus 72 iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~----------~g~Iv~isS~~~~~~~~~~~~ 141 (235)
T d1ooea_ 72 VDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP----------GGLLQLTGAAAAMGPTPSMIG 141 (235)
T ss_dssp EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE----------EEEEEEECCGGGGSCCTTBHH
T ss_pred eeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhccccccc----------ceEEEEeccHHhcCCcccccc
Confidence 9999999997654 44455556889999999999999999999999965 589999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHH-hcCC
Q 022386 169 VSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALY-LASD 246 (298)
Q Consensus 169 Y~~sK~a~~~l~~~la~e~~-~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~-L~s~ 246 (298)
|++||+|+.+|+++++.|++ .+.+|+||+|+||+++|++.....+ .....++.+|+++++.+++ +.++
T Consensus 142 Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~----------~~~~~~~~~~~~va~~~~~~l~~~ 211 (235)
T d1ooea_ 142 YGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMP----------NADHSSWTPLSFISEHLLKWTTET 211 (235)
T ss_dssp HHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHST----------TCCGGGCBCHHHHHHHHHHHHHCG
T ss_pred hHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCc----------CCccccCCCHHHHHHHHHHHhcCc
Confidence 99999999999999999996 2469999999999999875433221 1234457799999999875 5566
Q ss_pred CCCCccccEEEe---CCCCC
Q 022386 247 AGKYVNGNTLIV---DGGNW 263 (298)
Q Consensus 247 ~~~~~~G~~i~~---dgG~~ 263 (298)
...+++|+.+.+ ||+.+
T Consensus 212 ~~~~~tG~~i~v~~~~g~~~ 231 (235)
T d1ooea_ 212 SSRPSSGALLKITTENGTST 231 (235)
T ss_dssp GGCCCTTCEEEEEEETTEEE
T ss_pred cccCCCceEEEEEeeCCEEE
Confidence 678899999998 55443
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.97 E-value=3e-31 Score=225.30 Aligned_cols=211 Identities=15% Similarity=0.075 Sum_probs=169.7
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCCh---hHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK---TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~---~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
++|+|||||++|||+++|++|+++|+ +|++++|+. +..++..+++.+.+.++.++.||++|+++++++++.+.+.
T Consensus 9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~- 87 (259)
T d2fr1a1 9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD- 87 (259)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT-
T ss_pred cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc-
Confidence 46999999999999999999999999 588898863 4566777888888889999999999999999999987654
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCch
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQI 167 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~ 167 (298)
+++|++|||+|.....++.+.+.++|+.++++|+.+++++.+++. ... .++||++||..+..+.+...
T Consensus 88 ~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~----~~~--------~~~iv~~SS~a~~~g~~~~~ 155 (259)
T d2fr1a1 88 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTR----ELD--------LTAFVLFSSFASAFGAPGLG 155 (259)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHT----TSC--------CSEEEEEEEHHHHTCCTTCT
T ss_pred ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhh----ccC--------CceEeeecchhhccCCcccH
Confidence 689999999999988999999999999999999999999877543 322 58899999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcCC
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
.|+++|++++.|++.++. .||++++|+||.+.++.+... ...+.+.. ......+|+++++.+..++..
T Consensus 156 ~YaAaka~l~~la~~~~~-----~Gi~v~~I~pg~~~~~g~~~~----~~~~~~~~--~G~~~~~~~~~~~~l~~~l~~ 223 (259)
T d2fr1a1 156 GYAPGNAYLDGLAQQRRS-----DGLPATAVAWGTWAGSGMAEG----PVADRFRR--HGVIEMPPETACRALQNALDR 223 (259)
T ss_dssp TTHHHHHHHHHHHHHHHH-----TTCCCEEEEECCBC----------------CTT--TTEECBCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhHHHHHHHHHh-----CCCCEEECCCCcccCCccccc----hHHHHHHh--cCCCCCCHHHHHHHHHHHHhC
Confidence 999999999988776643 389999999999975533221 11111111 112346899999999888864
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.85 E-value=2.2e-20 Score=164.85 Aligned_cols=240 Identities=14% Similarity=0.086 Sum_probs=163.5
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh-----HHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-----VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.|+||||||||.||.+++++|+++|++|++++|... .++....+......++.++.+|++|.+++++.++..
T Consensus 1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (357)
T d1db3a_ 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV--- 77 (357)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc---
Confidence 389999999999999999999999999999999643 222222222333567999999999999999999865
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC----
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA---- 162 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~---- 162 (298)
.+|+++|+|+...... ..++.+..+++|+.|+.++++++...-.+. ..++|++||...+..
T Consensus 78 --~~d~v~h~aa~~~~~~----~~~~~~~~~~~Nv~gt~nllea~~~~~~~~---------~~r~i~~SS~~vYG~~~~~ 142 (357)
T d1db3a_ 78 --QPDEVYNLGAMSHVAV----SFESPEYTADVDAMGTLRLLEAIRFLGLEK---------KTRFYQASTSELYGLVQEI 142 (357)
T ss_dssp --CCSEEEECCCCCTTTT----TTSCHHHHHHHHTHHHHHHHHHHHHTTCTT---------TCEEEEEEEGGGGTTCCSS
T ss_pred --CCCEEEEeecccccch----hhhCHHHHHHHHHHHHHHHHHHHHHhCCCC---------CcEEEEEEchhhhCCCCCC
Confidence 6899999999754322 123345678999999999999886543221 356999998654311
Q ss_pred -------CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHh---h-h-------
Q 022386 163 -------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT---D-Y------- 224 (298)
Q Consensus 163 -------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~---~-~------- 224 (298)
..+...|+.||.+.+.+++.++..+ ++.+..+.|+.+..|..............+. . .
T Consensus 143 ~~~E~~~~~P~~~Y~~sK~~~E~~~~~~~~~~----~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g 218 (357)
T d1db3a_ 143 PQKETTPFYPRSPYAVAKLYAYWITVNYRESY----GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLG 218 (357)
T ss_dssp SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEES
T ss_pred CcCCCCCCCCCChHHHHHHHHHHHHHHHHHHh----CCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEEC
Confidence 1135679999999999999998876 4889999999888764332222222222111 1 1
Q ss_pred --ccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhh
Q 022386 225 --MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAV 282 (298)
Q Consensus 225 --~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~ 282 (298)
...+.+...+|+++++..++... .|+.+++..|..++ .+...+.+...+
T Consensus 219 ~~~~~r~~~~v~D~~~a~~~~~~~~----~~~~yni~sg~~~s-----~~~~~~~~~~~~ 269 (357)
T d1db3a_ 219 NMDSLRDWGHAKDYVKMQWMMLQQE----QPEDFVIATGVQYS-----VRQFVEMAAAQL 269 (357)
T ss_dssp CTTCEECCEEHHHHHHHHHHTTSSS----SCCCEEECCCCCEE-----HHHHHHHHHHTT
T ss_pred CCCeeecceeechHHHHHHHHHhCC----CCCeEEECCCCcee-----hHHHHHHHHHHh
Confidence 11224678999999998887542 46788888886664 344444444444
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=99.79 E-value=6.2e-21 Score=153.64 Aligned_cols=155 Identities=14% Similarity=0.147 Sum_probs=114.2
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
...+|+||+++||||++|||+++++.|+++|++|++++|+.+++++..+++... .++.+..+|+++.+++++++
T Consensus 17 ~~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~----- 90 (191)
T d1luaa1 17 AGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAV----- 90 (191)
T ss_dssp TTSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHT-----
T ss_pred cCCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhc-cchhhhhhhcccHHHHHHHh-----
Confidence 356999999999999999999999999999999999999999999888888653 23556789999999888765
Q ss_pred HhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC-CC
Q 022386 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-TW 164 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~-~~ 164 (298)
+++|++|||||+.. ...+.+.|+..+++|+.+.++....+.+.+.... .....+++.....+ ..
T Consensus 91 --~~iDilin~Ag~g~----~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~g~~~~ 155 (191)
T d1luaa1 91 --KGAHFVFTAGAIGL----ELLPQAAWQNESSIEIVADYNAQPPLGIGGIDAT---------DKGKEYGGKRAFGALGI 155 (191)
T ss_dssp --TTCSEEEECCCTTC----CCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTT---------CEEEEETTEEEECHHHH
T ss_pred --cCcCeeeecCcccc----ccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhc---------cCcEEecceEEEeccCc
Confidence 58999999999642 3468899999999998887765544332222111 11222222222111 11
Q ss_pred CchhhHHHHHHHHHHHH
Q 022386 165 YQIHVSAAKAAVDSITR 181 (298)
Q Consensus 165 ~~~~Y~~sK~a~~~l~~ 181 (298)
+...|+++|+++..|++
T Consensus 156 g~~~y~~sk~a~~~l~~ 172 (191)
T d1luaa1 156 GGLKLKLHRACIAKLFE 172 (191)
T ss_dssp HHHHHHHHHHHHHHHTS
T ss_pred CcHHHHHHHHHHHHHHh
Confidence 34579999999887764
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.78 E-value=4e-18 Score=148.98 Aligned_cols=228 Identities=16% Similarity=0.086 Sum_probs=156.4
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHh-CCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
.+|||||+|.||.++++.|+++|++|++++|.............. ...++.++++|++|.+.+.++++. .++|+
T Consensus 2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~-----~~~d~ 76 (338)
T d1udca_ 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHD-----HAIDT 76 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHH-----TTCSE
T ss_pred EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhc-----cCCCE
Confidence 599999999999999999999999999997632221122222211 235689999999999999998875 36999
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC---------
Q 022386 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--------- 163 (298)
Q Consensus 93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~--------- 163 (298)
+||+|+..... .+.++..+.+++|+.|+.++++++...- -.++|++||...+.+.
T Consensus 77 ViHlAa~~~~~----~~~~~~~~~~~~Nv~gt~nlL~~~~~~~------------v~~~i~~Ss~~vy~~~~~~~~~e~~ 140 (338)
T d1udca_ 77 VIHFAGLKAVG----ESVQKPLEYYDNNVNGTLRLISAMRAAN------------VKNFIFSSSATVYGDQPKIPYVESF 140 (338)
T ss_dssp EEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHHHT------------CCEEEEEEEGGGGCSCCSSSBCTTS
T ss_pred EEECCCccchh----hHHhCHHHHHHhHHHHHHHHHHHHHHhC------------CCEEEecCcceEEcccccccccccc
Confidence 99999853211 1223456889999999999999888653 2458898887755322
Q ss_pred ---CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC------ChHHHHHH----Hhh-h-----
Q 022386 164 ---WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL------APEEIRSK----ATD-Y----- 224 (298)
Q Consensus 164 ---~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~------~~~~~~~~----~~~-~----- 224 (298)
.+...|+.+|.+.+.+++....+.. ++.+..+.|+.+..+...... ........ ... .
T Consensus 141 ~~~~p~~~Y~~sK~~~e~~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i 217 (338)
T d1udca_ 141 PTGTPQSPYGKSKLMVEQILTDLQKAQP---DWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAI 217 (338)
T ss_dssp CCCCCSSHHHHHHHHHHHHHHHHHHHST---TCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEE
T ss_pred ccCCCcchHHHHHhhhhHHHHHHHhhcc---CCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEE
Confidence 2356899999999999998887743 789999999888765322111 11111111 111 0
Q ss_pred ----------ccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 225 ----------MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 225 ----------~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
...+.+...+|++.+...+.........++++++.++..++
T Consensus 218 ~g~~~~~~~g~~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~s 268 (338)
T d1udca_ 218 FGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNS 268 (338)
T ss_dssp ECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEE
T ss_pred eCCCcccCCCCceeeEEEEeehhhhccccccccccccCcceeeecCCCCCc
Confidence 01122457889998776655443444567889998887664
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.76 E-value=1.6e-17 Score=145.28 Aligned_cols=222 Identities=14% Similarity=0.042 Sum_probs=150.4
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC-CCC-eEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-GIP-AIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~-~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
.||+||||||+|.||.+++++|+++|++|+++.|+..+...+....... ..+ ..++..|+++.+++..++.
T Consensus 10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 82 (342)
T d1y1pa1 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK------- 82 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-------
T ss_pred CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc-------
Confidence 4899999999999999999999999999999999877666555443322 223 4457789999987776653
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC-----
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----- 163 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~----- 163 (298)
.+|+++|+++.... ..+ ....+..|+.++.++++.+..... -.++|++||.......
T Consensus 83 ~~~~v~~~a~~~~~----~~~---~~~~~~~nv~gt~~ll~~~~~~~~-----------v~~~i~~SS~~~~~~~~~~~~ 144 (342)
T d1y1pa1 83 GAAGVAHIASVVSF----SNK---YDEVVTPAIGGTLNALRAAAATPS-----------VKRFVLTSSTVSALIPKPNVE 144 (342)
T ss_dssp TCSEEEECCCCCSC----CSC---HHHHHHHHHHHHHHHHHHHHTCTT-----------CCEEEEECCGGGTCCCCTTCC
T ss_pred cchhhhhhcccccc----ccc---ccccccchhhhHHHHHHhhhcccc-----------cccccccccceeeccCCCCCC
Confidence 78999999985432 123 245577899999998888765321 3569999986542210
Q ss_pred --------------------------CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCCh---
Q 022386 164 --------------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP--- 214 (298)
Q Consensus 164 --------------------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~--- 214 (298)
.+...|+.+|.+.+.+++.+.++.. .++++..++|+.+..+........
T Consensus 145 ~~~~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~~i~p~~v~Gp~~~~~~~~~~~ 222 (342)
T d1y1pa1 145 GIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK--PHFTLNAVLPNYTIGTIFDPETQSGST 222 (342)
T ss_dssp CCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC--CSSEEEEEEESEEECCCSCTTTCCCHH
T ss_pred CccccccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcc--cccccceecccceeCCCCCccccccch
Confidence 1124699999999999999988864 478899999988866532222111
Q ss_pred HHHHHHHhh--------hccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCC
Q 022386 215 EEIRSKATD--------YMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 261 (298)
Q Consensus 215 ~~~~~~~~~--------~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG 261 (298)
..+...+.. ....+.+....|+|+++...+.. ....|+.+...++
T Consensus 223 ~~~~~~l~~g~~~~~~~~~~~~~~v~v~Dva~~~i~~l~~--~~~~g~~~~~~~~ 275 (342)
T d1y1pa1 223 SGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVL--PQIERRRVYGTAG 275 (342)
T ss_dssp HHHHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHC--TTCCSCEEEECCE
T ss_pred HHHHHHHHcCCcCcccCCccceeeeeHHHHHHHHHHhhcC--ccccceEEEEcCC
Confidence 111111111 11223366889999998766643 2245666655444
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.75 E-value=1.5e-17 Score=146.61 Aligned_cols=232 Identities=19% Similarity=0.125 Sum_probs=158.9
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCcEEE-EcCChhHH-HHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVL-RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~Vv~-~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
.||||||+|.||.+++++|++.|+.|++ +++..... ......+ ....++.++.+|++|...++.+++.. .+|
T Consensus 2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d 75 (361)
T d1kewa_ 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDI-SESNRYNFEHADICDSAEITRIFEQY-----QPD 75 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTT-TTCTTEEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhh-hhcCCcEEEEccCCCHHHHHHHHHhC-----CCC
Confidence 5899999999999999999999998554 54432110 0011111 11356899999999999999988753 799
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC--------
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-------- 163 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~-------- 163 (298)
++||+|+.... ....++....+++|+.++..+++++......... ......++|++||...+...
T Consensus 76 ~VihlAa~~~~----~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~---~~~~~~~~i~~SS~~vyg~~~~~~~~~~ 148 (361)
T d1kewa_ 76 AVMHLAAESHV----DRSITGPAAFIETNIVGTYALLEVARKYWSALGE---DKKNNFRFHHISTDEVYGDLPHPDEVEN 148 (361)
T ss_dssp EEEECCSCCCH----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCH---HHHHHCEEEEEEEGGGGCCCCCGGGSCT
T ss_pred EEEECccccch----hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhh---cccCceEEEEeccceeeCCCccCCcccc
Confidence 99999985321 1122334678999999999999999887543100 00002469999997754211
Q ss_pred -------------CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccC---
Q 022386 164 -------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA--- 227 (298)
Q Consensus 164 -------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--- 227 (298)
.+...|+.||.+.+.+++.+.... |+.+..+.|+.+..|.......-..+...+....+.
T Consensus 149 ~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~----~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~ 224 (361)
T d1kewa_ 149 SVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY----GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIY 224 (361)
T ss_dssp TSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEE
T ss_pred ccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh----CCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEe
Confidence 123569999999999999998775 599999999999877543322223333333333221
Q ss_pred ------CCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 228 ------YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 228 ------~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
+.+...+|+++++..++.... .|..+++..|...+
T Consensus 225 g~g~~~r~~i~v~D~a~ai~~~~~~~~---~~~~~Ni~s~~~~s 265 (361)
T d1kewa_ 225 GKGDQIRDWLYVEDHARALHMVVTEGK---AGETYNIGGHNEKK 265 (361)
T ss_dssp TTSCCEEEEEEHHHHHHHHHHHHHHCC---TTCEEEECCCCEEE
T ss_pred CCCCeEEeCEEHHHHHHHHHHHHhcCC---CCCeEEECCCCCcc
Confidence 235689999999988886432 37789998876664
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.74 E-value=1.6e-16 Score=141.35 Aligned_cols=214 Identities=13% Similarity=0.119 Sum_probs=147.9
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh----------------HHHHHHHHHHh-CCCCeEEEEccCCCHH
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT----------------VLRSAVAALHS-LGIPAIGLEGDVRKRE 74 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~----------------~~~~~~~~~~~-~~~~~~~~~~Dls~~~ 74 (298)
||.||||||+|.||.+++++|+++|++|++++.-.. ...+....+.. .+.++.++.+|++|.+
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~ 80 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE 80 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence 789999999999999999999999999999863211 11122222222 2467899999999999
Q ss_pred HHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEe
Q 022386 75 DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINI 154 (298)
Q Consensus 75 ~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~v 154 (298)
.++++++.. ++|+++|.|+.... .....+.+.....+.+|+.|+.++++++...-.+ ..+++.
T Consensus 81 ~l~~~~~~~-----~~d~ViHlAa~~~~-~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~-----------~~~i~~ 143 (393)
T d1i24a_ 81 FLAESFKSF-----EPDSVVHFGEQRSA-PYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEE-----------CHLVKL 143 (393)
T ss_dssp HHHHHHHHH-----CCSEEEECCSCCCH-HHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTT-----------CEEEEE
T ss_pred HHHHHHHhh-----cchheecccccccc-ccccccccccccccccccccccHHHHHHHHhccc-----------cceeec
Confidence 999998864 79999999986422 1112355667788999999999999987754432 347777
Q ss_pred cccccccC------------------------CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccC
Q 022386 155 SATLHYTA------------------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS 210 (298)
Q Consensus 155 ss~~~~~~------------------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~ 210 (298)
||...+.. ..+...|+.||.+.+.+++.+..+. ++++..+.|+.+..+....
T Consensus 144 ss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~----~l~~~~lR~~~v~G~~~~~ 219 (393)
T d1i24a_ 144 GTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW----GIRATDLNQGVVYGVKTDE 219 (393)
T ss_dssp CCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEECSCCTT
T ss_pred cccccccccccccccccccccccccccccccccccccHHHHHhhhhccccccccccc----ceeeeecccccccCCCccc
Confidence 77654421 1123469999999999999888776 5899999999887653211
Q ss_pred cC-----------------ChHHHHHHHhhhc---------cCCCCCCHHHHHHHHHHhcCC
Q 022386 211 KL-----------------APEEIRSKATDYM---------AAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 211 ~~-----------------~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~L~s~ 246 (298)
.. .-..+........ ..+.+...+|+++++..++..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~ 281 (393)
T d1i24a_ 220 TEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIAN 281 (393)
T ss_dssp GGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHS
T ss_pred cccccccccccccccccccchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHh
Confidence 10 0012222222211 112356789999999888854
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.70 E-value=1.7e-16 Score=138.62 Aligned_cols=212 Identities=15% Similarity=0.080 Sum_probs=145.5
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh-----HHHHHHHHHH-hCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-----VLRSAVAALH-SLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~-----~~~~~~~~~~-~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
|+||||||+|.||.+++++|+++|+.|+.++|..+ .++....... ....++.++.+|++|.+.+.++++..
T Consensus 2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 78 (347)
T d1t2aa_ 2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV--- 78 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc---
Confidence 45599999999999999999999999999998642 1121111111 11346899999999999999998764
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC----
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA---- 162 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~---- 162 (298)
.+++++|.++..... ...+.....+++|+.++.++++++...-... ..++|++||...+..
T Consensus 79 --~~~~v~~~~a~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~---------~~~~i~~SS~~vyg~~~~~ 143 (347)
T d1t2aa_ 79 --KPTEIYNLGAQSHVK----ISFDLAEYTADVDGVGTLRLLDAVKTCGLIN---------SVKFYQASTSELYGKVQEI 143 (347)
T ss_dssp --CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHTTCTT---------TCEEEEEEEGGGTCSCSSS
T ss_pred --ccceeeeeeeccccc----hhhccchhhhhhHHHHHHHHHHHHHHcCCCC---------CcEEEEecchheecCCCCC
Confidence 688899988753211 1234456678999999999999887654322 356999988764321
Q ss_pred -------CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHh----hhc------
Q 022386 163 -------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT----DYM------ 225 (298)
Q Consensus 163 -------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~----~~~------ 225 (298)
..+...|+.||.+.+.+++.+...+ ++.+..+.|+.+..|..............+. ...
T Consensus 144 ~~~E~~~~~P~~~Yg~sK~~aE~~~~~~~~~~----~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g 219 (347)
T d1t2aa_ 144 PQKETTPFYPRSPYGAAKLYAYWIVVNFREAY----NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLG 219 (347)
T ss_dssp SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEES
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh----CCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecC
Confidence 1134579999999999999988775 5888889998887664333222222211111 111
Q ss_pred ---cCCCCCCHHHHHHHHHHhcCC
Q 022386 226 ---AAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 226 ---~~~~~~~~~dva~~~~~L~s~ 246 (298)
..+.+...+|+++++..++..
T Consensus 220 ~g~~~r~~i~v~D~~~a~~~~~~~ 243 (347)
T d1t2aa_ 220 NLDAKRDWGHAKDYVEAMWLMLQN 243 (347)
T ss_dssp CTTCEECCEEHHHHHHHHHHHHHS
T ss_pred CCcceeeeeEecHHHHHHHHHhhc
Confidence 123467889999999888854
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.70 E-value=1.2e-16 Score=138.09 Aligned_cols=224 Identities=15% Similarity=0.076 Sum_probs=152.5
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHH-HHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVL-RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
|+||||||+|.||.+++++|+++|++|+.++|..... ....+.+. ...++.++.+|++|.+++.+.+... ..+
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~~ 74 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKA-----QPQ 74 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhc-ccCCcEEEEccccChHHhhhhhccc-----ccc
Confidence 7899999999999999999999999999999874321 11122221 2346899999999999999888764 677
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC---------
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA--------- 162 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~--------- 162 (298)
+++++++...... ..+.....++.|+.++.++++++...-.+ .++++.|+...+..
T Consensus 75 ~~~~~a~~~~~~~----~~~~~~~~~~~n~~g~~~~l~~~~~~~~~-----------~~~i~~Ss~~~~~~~~~~~~~E~ 139 (321)
T d1rpna_ 75 EVYNLAAQSFVGA----SWNQPVTTGVVDGLGVTHLLEAIRQFSPE-----------TRFYQASTSEMFGLIQAERQDEN 139 (321)
T ss_dssp EEEECCSCCCHHH----HTTSHHHHHHHHTHHHHHHHHHHHHHCTT-----------SEEEEEEEGGGGCSCSSSSBCTT
T ss_pred ccccccccccccc----cccchHHHHhhhhhchHHHHHHHHHhCCC-----------cccccccchhhcCcccCCCCCCC
Confidence 8888886532211 11234678899999999999888764432 34666666543311
Q ss_pred --CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHH---HHHh-hh-c--------cC
Q 022386 163 --TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR---SKAT-DY-M--------AA 227 (298)
Q Consensus 163 --~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~---~~~~-~~-~--------~~ 227 (298)
..+...|+.+|.+.+.+++.+..+. ++++..+.|+.+..|............ .+.. .. . ..
T Consensus 140 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~ 215 (321)
T d1rpna_ 140 TPFYPRSPYGVAKLYGHWITVNYRESF----GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAK 215 (321)
T ss_dssp SCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCE
T ss_pred CCccccChhHHHHHHHHHHHHHHHhhc----CCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeE
Confidence 1235689999999999999998876 488899999888766433322111111 1111 11 1 11
Q ss_pred CCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 228 YKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 228 ~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
+.+...+|+++++..++..+. +..+++.++...+
T Consensus 216 r~~i~v~D~~~~~~~~~~~~~----~~~~ni~~~~~~s 249 (321)
T d1rpna_ 216 RDWGFAGDYVEAMWLMLQQDK----ADDYVVATGVTTT 249 (321)
T ss_dssp EECEEHHHHHHHHHHHHHSSS----CCCEEECCSCEEE
T ss_pred EccEEeHHHHHHHHHHHhcCC----cCCceecccccce
Confidence 236789999999999885432 3456777775554
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.70 E-value=6e-16 Score=134.99 Aligned_cols=242 Identities=15% Similarity=0.015 Sum_probs=164.1
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHh-----CCCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-----LGIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
.+.|++|||||+|.||.+++++|.++|++|+.+++.........+.+.. ...++.++.+|+.|........
T Consensus 14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~---- 89 (341)
T d1sb8a_ 14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC---- 89 (341)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH----
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccc----
Confidence 3568999999999999999999999999999998633211111111111 1246889999999998766554
Q ss_pred HHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC-
Q 022386 85 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT- 163 (298)
Q Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~- 163 (298)
...+.++|.++.... ....++....+++|+.|+.++++++...- -.++|++||...+...
T Consensus 90 ---~~~~~v~~~~a~~~~----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~------------~~~~i~~SS~~vyg~~~ 150 (341)
T d1sb8a_ 90 ---AGVDYVLHQAALGSV----PRSINDPITSNATNIDGFLNMLIAARDAK------------VQSFTYAASSSTYGDHP 150 (341)
T ss_dssp ---TTCSEEEECCSCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHTT------------CSEEEEEEEGGGGTTCC
T ss_pred ---ccccccccccccccc----cccccCccchhheeehhHHHHHHHHHhcC------------CceEEEcccceeeCCCC
Confidence 378888888874321 11345667789999999999998886432 2469999997754321
Q ss_pred ----------CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCCh----HHHHHHHhhh-----
Q 022386 164 ----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP----EEIRSKATDY----- 224 (298)
Q Consensus 164 ----------~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~----~~~~~~~~~~----- 224 (298)
.+...|+.+|.+.+.+++.+.... ++++..+.|+.+..+........ ..........
T Consensus 151 ~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~ 226 (341)
T d1sb8a_ 151 GLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCY----GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYI 226 (341)
T ss_dssp CSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEE
T ss_pred CCCccCCCCCCCCCcchHHHHHHHHHHHHHHHHh----CCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEE
Confidence 234689999999999999998775 48899999998876643322211 1222222211
Q ss_pred ----ccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhhh
Q 022386 225 ----MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVER 284 (298)
Q Consensus 225 ----~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~~ 284 (298)
...+.+...+|++.++..++.... ...|+.+++..+...+ ...+.+.+...+.+
T Consensus 227 ~g~g~~~r~~i~v~D~~~a~~~~~~~~~-~~~~~~~~~~~~~~~s-----i~~i~~~i~~~~~~ 284 (341)
T d1sb8a_ 227 NGDGETSRDFCYIENTVQANLLAATAGL-DARNQVYNIAVGGRTS-----LNQLFFALRDGLAE 284 (341)
T ss_dssp ESSSCCEECCEEHHHHHHHHHHHHTCCG-GGCSEEEEESCSCCEE-----HHHHHHHHHHHHHH
T ss_pred cCCCCEEEEEEEEeccchhhhhhhhccc-cccceeeeecccccch-----HHHHHHHHHHHhcc
Confidence 122357788999999888775432 2467888887766554 24444444444443
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.69 E-value=4.4e-16 Score=135.82 Aligned_cols=216 Identities=14% Similarity=0.057 Sum_probs=149.5
Q ss_pred EEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
.||||||+|.||.+++++|+++|. .|+++++......... ...++.++++|+++.+++.+.+. ..+|+
T Consensus 2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~-----~~~~~~~i~~Di~~~~~~~~~~~------~~~d~ 70 (342)
T d2blla1 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHV------KKCDV 70 (342)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHH------HHCSE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc-----cCCCeEEEECccCChHHHHHHHH------hCCCc
Confidence 589999999999999999999995 7988888654322221 24579999999998766655332 15999
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC---------
Q 022386 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--------- 163 (298)
Q Consensus 93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~--------- 163 (298)
+||+|+..... ...+.....+++|+.++.++++++... +-+++++||...+...
T Consensus 71 Vih~a~~~~~~----~~~~~~~~~~~~nv~gt~~ll~~~~~~-------------~~~~~~~ss~~~~~~~~~~~~~~~~ 133 (342)
T d2blla1 71 VLPLVAIATPI----EYTRNPLRVFELDFEENLRIIRYCVKY-------------RKRIIFPSTSEVYGMCSDKYFDEDH 133 (342)
T ss_dssp EEECBCCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHT-------------TCEEEEECCGGGGBTCCCSSBCTTT
T ss_pred ccccccccccc----ccccCCccccccccccccccccccccc-------------ccccccccccccccccccccccccc
Confidence 99999864321 122334577999999999999987532 2346677665543321
Q ss_pred ---------CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC--------hHHHHHHHhhh--
Q 022386 164 ---------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--------PEEIRSKATDY-- 224 (298)
Q Consensus 164 ---------~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~--------~~~~~~~~~~~-- 224 (298)
.+...|+.||.+.+.+++.+.+.. |+++..+.|..+..+....... ...+.......
T Consensus 134 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 209 (342)
T d2blla1 134 SNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE----GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSP 209 (342)
T ss_dssp CCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCC
T ss_pred ccccccccCCCcchhhhcccchhhhhhhhhccc----CceeEEeeccccccccccccccccccccccchHHHHHHHhCCC
Confidence 123579999999999999998886 5888888888887653322211 12222222111
Q ss_pred -------ccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCC
Q 022386 225 -------MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGG 261 (298)
Q Consensus 225 -------~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG 261 (298)
...+.+...+|+++++..++........|+.+++.+|
T Consensus 210 ~~~~~~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~ 253 (342)
T d2blla1 210 IKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNP 253 (342)
T ss_dssp EEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCT
T ss_pred ccccCCCCeeeeecccccccceeeeehhhccccCCCeEEEEecc
Confidence 2223477999999999999876544556899999554
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.69 E-value=3e-16 Score=137.21 Aligned_cols=241 Identities=13% Similarity=0.035 Sum_probs=159.9
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCC------hhHHHHHHHHHHh-CCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR------KTVLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~------~~~~~~~~~~~~~-~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
|+||||||+|.||.+++++|+++|++|+++++. ........+.+.. ...++.++.+|++|.+.+++++..
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~--- 79 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK--- 79 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH---
T ss_pred CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccc---
Confidence 788999999999999999999999999998641 1111111121211 245689999999999999988764
Q ss_pred HhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC--
Q 022386 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-- 163 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~-- 163 (298)
..+++++|.|+..... ...+...+.+++|+.++.++++++...- -.+++++||...+...
T Consensus 80 --~~~~~i~h~Aa~~~~~----~~~~~p~~~~~~Nv~gt~~l~~~~~~~~------------v~~~i~~ss~~~~~~~~~ 141 (346)
T d1ek6a_ 80 --YSFMAVIHFAGLKAVG----ESVQKPLDYYRVNLTGTIQLLEIMKAHG------------VKNLVFSSSATVYGNPQY 141 (346)
T ss_dssp --CCEEEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHHTT------------CCEEEEEEEGGGGCSCSS
T ss_pred --cccccccccccccCcH----hhHhCHHHHHHhhhcccccccchhhhcC------------cccccccccceeeecccc
Confidence 4788999999854321 1223346778999999999888765322 2458888776554321
Q ss_pred ----------CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC------Ch----HHHHHHHhh
Q 022386 164 ----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL------AP----EEIRSKATD 223 (298)
Q Consensus 164 ----------~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~------~~----~~~~~~~~~ 223 (298)
.....|+.+|.+.+..++.++... .++....+.|+.+..+...... .. ..+......
T Consensus 142 ~~~~~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (346)
T d1ek6a_ 142 LPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQAD---KTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIG 218 (346)
T ss_dssp SSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHC---TTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHT
T ss_pred ccccccccccccCChHHHHHHHHHHHHHHHHHhc---cCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHc
Confidence 134579999999999999887653 3788888888887654321111 11 111111111
Q ss_pred -h---------------ccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhh
Q 022386 224 -Y---------------MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAV 282 (298)
Q Consensus 224 -~---------------~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~ 282 (298)
. ...+.+...+|+|.++..++........++++++.+|..++ .+.+.+.+...+
T Consensus 219 ~~~~i~i~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s-----~~dl~~~i~~~~ 288 (346)
T d1ek6a_ 219 RREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYS-----VLQMVQAMEKAS 288 (346)
T ss_dssp SSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEE-----HHHHHHHHHHHH
T ss_pred CCCcEEEcCCcccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCccc-----HHHHHHHHHHHh
Confidence 1 01134689999999988776544455668899998887765 244444444443
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.68 E-value=1e-15 Score=124.02 Aligned_cols=199 Identities=15% Similarity=0.129 Sum_probs=131.2
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
|..|+++||||||+||.+++++|+++|++|.++.|+.+++... ....+.++.+|++|.+++.++++ .
T Consensus 1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~------~~~~~~~~~gD~~d~~~l~~al~-------~ 67 (205)
T d1hdoa_ 1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTVA-------G 67 (205)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHHT-------T
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc------cccccccccccccchhhHHHHhc-------C
Confidence 4568899999999999999999999999999999997653211 23458889999999998877765 6
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC----
Q 022386 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY---- 165 (298)
Q Consensus 90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~---- 165 (298)
.|++|+++|........ +++..+..++++ .+++.+ -.++|++||.........
T Consensus 68 ~d~vi~~~g~~~~~~~~-----------~~~~~~~~~l~~----aa~~~~--------v~r~i~~ss~~~~~~~~~~~~~ 124 (205)
T d1hdoa_ 68 QDAVIVLLGTRNDLSPT-----------TVMSEGARNIVA----AMKAHG--------VDKVVACTSAFLLWDPTKVPPR 124 (205)
T ss_dssp CSEEEECCCCTTCCSCC-----------CHHHHHHHHHHH----HHHHHT--------CCEEEEECCGGGTSCTTCSCGG
T ss_pred CCEEEEEeccCCchhhh-----------hhhHHHHHHHHH----HHHhcC--------CCeEEEEeeeeccCCCcccccc
Confidence 89999999864322111 133344444444 444443 357999988765433222
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHHHHhcC
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 245 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~L~s 245 (298)
...|...|.+.+.+.+ ..|++...|.||.+.......... ..........+.+.+|+|++++.++.
T Consensus 125 ~~~~~~~~~~~e~~l~--------~~~~~~tiirp~~~~~~~~~~~~~------~~~~~~~~~~~i~~~DvA~~~~~~l~ 190 (205)
T d1hdoa_ 125 LQAVTDDHIRMHKVLR--------ESGLKYVAVMPPHIGDQPLTGAYT------VTLDGRGPSRVISKHDLGHFMLRCLT 190 (205)
T ss_dssp GHHHHHHHHHHHHHHH--------HTCSEEEEECCSEEECCCCCSCCE------EESSSCSSCSEEEHHHHHHHHHHTTS
T ss_pred ccccchHHHHHHHHHH--------hcCCceEEEecceecCCCCcccEE------EeeCCCCCCCcCCHHHHHHHHHHHhC
Confidence 2345555555544332 347999999999886432221110 00011122345789999999999996
Q ss_pred CCCCCccccEEEeCC
Q 022386 246 DAGKYVNGNTLIVDG 260 (298)
Q Consensus 246 ~~~~~~~G~~i~~dg 260 (298)
.+. ..|+.+.+.+
T Consensus 191 ~~~--~~g~~~~~s~ 203 (205)
T d1hdoa_ 191 TDE--YDGHSTYPSH 203 (205)
T ss_dssp CST--TTTCEEEEEC
T ss_pred CCC--CCCEEEecCC
Confidence 542 4588777654
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.68 E-value=4.1e-16 Score=136.46 Aligned_cols=170 Identities=16% Similarity=0.048 Sum_probs=125.2
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhH-HHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV-LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
|+||||||+|.||.+++++|+++|++|+++++.... .......-.....++.++.+|++|.++++.+++.. ++|
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-----~~d 76 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-----KID 76 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-----CCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhcc-----CCC
Confidence 799999999999999999999999999998763221 11111111112456888999999999999988742 799
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC---------
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA--------- 162 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~--------- 162 (298)
++||+|+..... ...+.-...+.+|+.++.++++++...- -.++|++||...+..
T Consensus 77 ~VihlAa~~~~~----~~~~~~~~~~~~N~~~t~~ll~~~~~~~------------i~~~i~~SS~~vyg~~~~~~~~~~ 140 (347)
T d1z45a2 77 SVIHFAGLKAVG----ESTQIPLRYYHNNILGTVVLLELMQQYN------------VSKFVFSSSATVYGDATRFPNMIP 140 (347)
T ss_dssp EEEECCSCCCHH----HHHHSHHHHHHHHHHHHHHHHHHHHHHT------------CCEEEEEEEGGGGCCGGGSTTCCS
T ss_pred EEEEcccccccc----ccccCcccccccchhhhHHHHHHHHhcc------------cceEEeecceeeecCcccCCCCCc
Confidence 999999854211 1223345778899999999999986532 235999998665421
Q ss_pred ------CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccC
Q 022386 163 ------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD 205 (298)
Q Consensus 163 ------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t 205 (298)
..+...|+.||.+.+.+++.+.... ..++++..+.|+.+..
T Consensus 141 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~~lR~~~v~g 187 (347)
T d1z45a2 141 IPEECPLGPTNPYGHTKYAIENILNDLYNSD--KKSWKFAILRYFNPIG 187 (347)
T ss_dssp BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS--TTSCEEEEEEECEEEC
T ss_pred cccccCCCCCChhHhHHHHHHHHHHHHHHhh--ccCCcEEEEeecceEe
Confidence 1134579999999999999998764 4578888888876654
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.68 E-value=1.3e-15 Score=132.47 Aligned_cols=215 Identities=15% Similarity=0.056 Sum_probs=147.4
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh-----HHHHHHHHHHh-CCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-----VLRSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~-----~~~~~~~~~~~-~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
|++|||||||.||.++++.|+++|+.|+.++|..+ ....+...... ....+.++.+|+++.++++..++..
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~--- 78 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI--- 78 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh---
Confidence 89999999999999999999999999999998532 11111111111 1345788999999999999988753
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC---
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--- 163 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~--- 163 (298)
++|++||+|+..... ...+.....++.|+.+...+..++.....+... ..++++.||.......
T Consensus 79 --~~D~Vih~Aa~~~~~----~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ss~~~~~~~~~~ 145 (339)
T d1n7ha_ 79 --KPDEVYNLAAQSHVA----VSFEIPDYTADVVATGALRLLEAVRSHTIDSGR-------TVKYYQAGSSEMFGSTPPP 145 (339)
T ss_dssp --CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCC-------CCEEEEEEEGGGGTTSCSS
T ss_pred --ccchhhhcccccccc----ccccCccccccccccccchhhhhhhhccccccc-------ceeeeecccceecccCCCC
Confidence 899999999853221 122445678899999999999998876655421 2345555554432221
Q ss_pred -------CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHh----h---------
Q 022386 164 -------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT----D--------- 223 (298)
Q Consensus 164 -------~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~----~--------- 223 (298)
.+...|+.+|.+.+.++..+.+.. ++.+..+.|+.+..|................ .
T Consensus 146 ~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~ 221 (339)
T d1n7ha_ 146 QSETTPFHPRSPYAASKCAAHWYTVNYREAY----GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGN 221 (339)
T ss_dssp BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESC
T ss_pred CCCCCCCCCcchhhHHHHHHHHHHHHHHHHh----CCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCC
Confidence 235689999999999999998775 5999999999998764333222222221111 1
Q ss_pred hccCCCCCCHHHHHHHHHHhcCCC
Q 022386 224 YMAAYKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 224 ~~~~~~~~~~~dva~~~~~L~s~~ 247 (298)
....+.+...+|+++++..++..+
T Consensus 222 ~~~~rd~~~v~D~a~~~~~~~~~~ 245 (339)
T d1n7ha_ 222 LQASRDWGFAGDYVEAMWLMLQQE 245 (339)
T ss_dssp TTCEEECEEHHHHHHHHHHHHTSS
T ss_pred CCccccceeeehHHHHHHHHHhcC
Confidence 111223667999999998888654
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.67 E-value=3.2e-16 Score=137.12 Aligned_cols=223 Identities=17% Similarity=0.084 Sum_probs=147.2
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHH-hCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH-SLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
-|.||||||||.||.+++++|+++|+.|.++.++..........+. -...++.++.+|++|.+.+..++. ..
T Consensus 2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~-------~~ 74 (346)
T d1oc2a_ 2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAA-------KA 74 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHT-------TC
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHh-------hh
Confidence 4789999999999999999999999876555432100000000111 124579999999999999888764 68
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC-------
Q 022386 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT------- 163 (298)
Q Consensus 91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~------- 163 (298)
+.++|.|+..... ....+..+.+++|+.++.+++..+...- .++|++||...+...
T Consensus 75 ~~v~~~a~~~~~~----~~~~~~~~~~~~N~~g~~nll~~~~~~~-------------~k~i~~ss~~vyg~~~~~~~~~ 137 (346)
T d1oc2a_ 75 DAIVHYAAESHND----NSLNDPSPFIHTNFIGTYTLLEAARKYD-------------IRFHHVSTDEVYGDLPLREDLP 137 (346)
T ss_dssp SEEEECCSCCCHH----HHHHCCHHHHHHHTHHHHHHHHHHHHHT-------------CEEEEEEEGGGGCCBCCGGGST
T ss_pred hhhhhhhhccccc----chhhCcccceeeehHhHHhhhhhhcccc-------------ccccccccceEecccCcccccc
Confidence 8899999754321 1123345778999999999988775443 337777666543211
Q ss_pred ----------------CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhh---
Q 022386 164 ----------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY--- 224 (298)
Q Consensus 164 ----------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~--- 224 (298)
.+...|+.+|.+.+.+++.+.+++ |+++..+.|+.+..|.......-..........
T Consensus 138 ~~~~~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~----~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~ 213 (346)
T d1oc2a_ 138 GHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF----GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKP 213 (346)
T ss_dssp TTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCC
T ss_pred ccccCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc----CCCEEEEeecceeCCCCCccchhHHHHHHHHcCCce
Confidence 123569999999999999998775 599999999999876432221112222222221
Q ss_pred ------ccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 225 ------MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 225 ------~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
...+.+...+|+++++..+.... ..|..+++.++....
T Consensus 214 ~i~~~g~~~r~~i~v~D~a~a~~~~~~~~---~~~~~~~~~~~~~~~ 257 (346)
T d1oc2a_ 214 KLYGEGKNVRDWIHTNDHSTGVWAILTKG---RMGETYLIGADGEKN 257 (346)
T ss_dssp EEETTSCCEEECEEHHHHHHHHHHHHHHC---CTTCEEEECCSCEEE
T ss_pred eEeCCCCccccccchhhHHHHHHHHHhhc---ccCcccccccccccc
Confidence 12234678889999998877543 235666666665543
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.67 E-value=7.2e-16 Score=135.58 Aligned_cols=232 Identities=16% Similarity=0.044 Sum_probs=158.9
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
+++.||||||+|.||.+++++|+++|+.|+++++..... ....-....+..+|+.+.+.+..+++ .+
T Consensus 14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~------~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~ 80 (363)
T d2c5aa1 14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEH------MTEDMFCDEFHLVDLRVMENCLKVTE-------GV 80 (363)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSS------SCGGGTCSEEEECCTTSHHHHHHHHT-------TC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccc------hhhhcccCcEEEeechhHHHHHHHhh-------cC
Confidence 566799999999999999999999999999998754310 11111335678899999987766553 78
Q ss_pred cEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC-------
Q 022386 91 DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT------- 163 (298)
Q Consensus 91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~------- 163 (298)
|++||.|+....... ..+.....+..|+.++..++.++...- -.++|++||...+...
T Consensus 81 d~Vih~a~~~~~~~~---~~~~~~~~~~~n~~gt~~ll~~~~~~~------------vk~~i~~SS~~~~~~~~~~~~~~ 145 (363)
T d2c5aa1 81 DHVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMIEAARING------------IKRFFYASSACIYPEFKQLETTN 145 (363)
T ss_dssp SEEEECCCCCCCHHH---HTTCHHHHHHHHHHHHHHHHHHHHHTT------------CSEEEEEEEGGGSCGGGSSSSSS
T ss_pred CeEeecccccccccc---cccccccccccccchhhHHHHhHHhhC------------ccccccccccccccccccccccc
Confidence 999999986433111 123456778899999999988877543 2459999997765321
Q ss_pred -----------CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCCh-----HHHHHHHhhh---
Q 022386 164 -----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP-----EEIRSKATDY--- 224 (298)
Q Consensus 164 -----------~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~-----~~~~~~~~~~--- 224 (298)
.+...|+.+|.+.+.+++.+..+. |+++..+.|+.+..+........ ..........
T Consensus 146 ~~~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~----gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (363)
T d2c5aa1 146 VSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF----GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRF 221 (363)
T ss_dssp CEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCE
T ss_pred cccccccCCcCCCCCHHHHHHHHHHHHHHHHHHHh----CCCEEEEEeeeEeccCCcccccccccccccccccccccccc
Confidence 124579999999999999998776 59999999999987643322211 1111111111
Q ss_pred ------ccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhh
Q 022386 225 ------MAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVE 283 (298)
Q Consensus 225 ------~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~ 283 (298)
...+.+...+|++.++..++... .|..+++.+|..++ ...+.+.+...+.
T Consensus 222 ~~~g~g~~~rd~i~v~D~~~~~~~~~~~~----~~~~~ni~~~~~~s-----~~~l~~~i~~~~g 277 (363)
T d2c5aa1 222 EMWGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVS-----MNEMAEMVLSFEE 277 (363)
T ss_dssp EEESCSCCEECCEEHHHHHHHHHHHHHSS----CCSCEEECCCCCEE-----HHHHHHHHHHTTT
T ss_pred cccCCCCeEEEEeehhHHHHHHHHHHhCC----CCCeEEEecCCccc-----HHHHHHHHHHHhC
Confidence 12345788999999999888543 36678888887765 3444444444433
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.67 E-value=1.9e-15 Score=131.07 Aligned_cols=222 Identities=16% Similarity=0.103 Sum_probs=144.7
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh-HHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT-VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
.||||||+|.||.++++.|+++|++|+++++-.. ...+....+.. ..++.++.+|+++.+++.++++.. ++|+
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~-~~~~~~i~~Di~~~~~l~~~~~~~-----~~d~ 75 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKY-----MPDS 75 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhc-cCCcEEEEcccCCHHHHHHHHHhc-----CCce
Confidence 5899999999999999999999999999875321 12222333332 457899999999999999988754 6899
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC---------
Q 022386 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--------- 163 (298)
Q Consensus 93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~--------- 163 (298)
+||+|+..... ...++....+++|+.|+.++++++...-. .+.++.+|.....+.
T Consensus 76 Vih~aa~~~~~----~~~~~~~~~~~~Nv~gt~nll~~~~~~~~------------~~~i~~sS~~~~~~~~~~~~~~~~ 139 (338)
T d1orra_ 76 CFHLAGQVAMT----TSIDNPCMDFEINVGGTLNLLEAVRQYNS------------NCNIIYSSTNKVYGDLEQYKYNET 139 (338)
T ss_dssp EEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHHHCT------------TCEEEEEEEGGGGTTCTTSCEEEC
T ss_pred EEeeccccccc----ccccChHHHHHHHHHHHHHHHHhhhcccc------------cccccccccccccccccccccccc
Confidence 99999864321 12234578899999999999987765432 225555554332221
Q ss_pred -------------------CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC---hHHHHHHH
Q 022386 164 -------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---PEEIRSKA 221 (298)
Q Consensus 164 -------------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~---~~~~~~~~ 221 (298)
.+...|+.+|...+.+.......+. +....+.|..+..+....... ...+....
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (338)
T d1orra_ 140 ETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFG----LNTVVFRHSSMYGGRQFATYDQGWVGWFCQKA 215 (338)
T ss_dssp SSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHC----CEEEEEEECCEECTTCCCBTTBCHHHHHHHHH
T ss_pred cccccccccccCcccCCccccccccccccchhhhhhhhhhhccC----cccccccccceeeccccccccccccchhhHHH
Confidence 1346799999999999999988874 444444433333222111111 12222222
Q ss_pred hh--------------hccCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCC
Q 022386 222 TD--------------YMAAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGN 262 (298)
Q Consensus 222 ~~--------------~~~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~ 262 (298)
.. ....+.+...+|+++++..++... ....|+.+++.+|.
T Consensus 216 ~~~~~~~~~~~~~~g~g~~~r~~~~v~D~~~~~~~~l~~~-~~~~~~~~~i~~~~ 269 (338)
T d1orra_ 216 VEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANV-SKIRGNAFNIGGTI 269 (338)
T ss_dssp HHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTH-HHHTTCEEEESSCG
T ss_pred HHHHhccCCceEEeCCCceeEeeecccchhhHHHHHHhcc-ccccCccccccccc
Confidence 11 011123567899999998887542 34668888886653
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.66 E-value=4.4e-16 Score=134.86 Aligned_cols=233 Identities=18% Similarity=0.106 Sum_probs=158.8
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCcEEE------EcCChhHH-HHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAAIAI------MGRRKTVL-RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~Vv~------~~r~~~~~-~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.||||||+|.||.++++.|+++|+.|.. ++...... ......+ ....++.++..|+++........
T Consensus 2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~------ 74 (322)
T d1r6da_ 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPV-DADPRLRFVHGDIRDAGLLAREL------ 74 (322)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGG-TTCTTEEEEECCTTCHHHHHHHT------
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhh-hcCCCeEEEEeccccchhhhccc------
Confidence 5899999999999999999999986543 33221100 0000111 22456899999999998776543
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC---
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--- 163 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~--- 163 (298)
..+|.++|.|+..... .......+.+++|+.++..+++++...- ..++|++||...+.+.
T Consensus 75 -~~~d~vi~~a~~~~~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~------------~~~~I~~Ss~~~yg~~~~~ 137 (322)
T d1r6da_ 75 -RGVDAIVHFAAESHVD----RSIAGASVFTETNVQGTQTLLQCAVDAG------------VGRVVHVSTNQVYGSIDSG 137 (322)
T ss_dssp -TTCCEEEECCSCCCHH----HHHHCCHHHHHHHTHHHHHHHHHHHHTT------------CCEEEEEEEGGGGCCCSSS
T ss_pred -cccceEEeeccccccc----ccccchHHHhhhhHHHHHHHHHHHHHcC------------CceEEEeecceeecCCCCC
Confidence 4899999999753221 1234456788999999999999886431 3469999988765332
Q ss_pred --------CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhcc---------
Q 022386 164 --------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA--------- 226 (298)
Q Consensus 164 --------~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~--------- 226 (298)
.+...|+.+|.+.+.+++.++++. |+++..+.|+.+..+.......-+.+...+....+
T Consensus 138 ~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~ 213 (322)
T d1r6da_ 138 SWTESSPLEPNSPYAASKAGSDLVARAYHRTY----GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGAN 213 (322)
T ss_dssp CBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCC
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh----CCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCe
Confidence 134589999999999999998875 59999999999987643332222333333322221
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhh
Q 022386 227 AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAV 282 (298)
Q Consensus 227 ~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~ 282 (298)
.+.+...+|+|+++..++.... .|+.+++..|..++ ...+.+.+.+.+
T Consensus 214 ~r~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~~~s-----~~e~~~~i~~~~ 261 (322)
T d1r6da_ 214 VREWVHTDDHCRGIALVLAGGR---AGEIYHIGGGLELT-----NRELTGILLDSL 261 (322)
T ss_dssp EEEEEEHHHHHHHHHHHHHHCC---TTCEEEECCCCEEE-----HHHHHHHHHHHH
T ss_pred EEccEEHHHHHHHHHHHHhCCC---CCCeeEEeecccch-----hHHHHHHHHHHh
Confidence 1235688999999999986543 47899998887765 344444444443
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.64 E-value=9.7e-16 Score=132.18 Aligned_cols=227 Identities=13% Similarity=0.023 Sum_probs=149.6
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
|.||||||+|.||.+++++|+++|++|+++++......+..... ....+++....|+.+. .+.++|+
T Consensus 2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~------------~~~~~d~ 68 (312)
T d2b69a1 2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW-IGHENFELINHDVVEP------------LYIEVDQ 68 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGG-TTCTTEEEEECCTTSC------------CCCCCSE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHh-cCCCceEEEehHHHHH------------HHcCCCE
Confidence 78999999999999999999999999999986432111111111 1123455665565432 1247999
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC----------
Q 022386 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA---------- 162 (298)
Q Consensus 93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~---------- 162 (298)
+||+|+....... ..+..+.+++|+.++.++++++... +.++|++||...+..
T Consensus 69 VihlAa~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~~~~~-------------~~k~I~~SS~~vy~~~~~~~~~e~~ 131 (312)
T d2b69a1 69 IYHLASPASPPNY----MYNPIKTLKTNTIGTLNMLGLAKRV-------------GARLLLASTSEVYGDPEVHPQSEDY 131 (312)
T ss_dssp EEECCSCCSHHHH----TTCHHHHHHHHHHHHHHHHHHHHHH-------------TCEEEEEEEGGGGBSCSSSSBCTTC
T ss_pred EEECcccCCchhH----HhCHHHHHHHHHHHHHHHHHHHHHc-------------CCcEEEEEChheecCCCCCCCCccc
Confidence 9999985432111 1233567899999999999887542 135999988654421
Q ss_pred ------CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC--hHHHHHHHhhhc---------
Q 022386 163 ------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDYM--------- 225 (298)
Q Consensus 163 ------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~--~~~~~~~~~~~~--------- 225 (298)
..+...|+.||.+.+.+++.++.+. |+++..+.|+.+..|....... -+.+........
T Consensus 132 ~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~ 207 (312)
T d2b69a1 132 WGHVNPIGPRACYDEGKRVAETMCYAYMKQE----GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGS 207 (312)
T ss_dssp CCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH----CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSC
T ss_pred cCCCCCCCCccHHHHHHHHHHHHHHHHHHHh----CCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCC
Confidence 1235679999999999999998885 5999999999998765433221 123333322221
Q ss_pred cCCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhh
Q 022386 226 AAYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAV 282 (298)
Q Consensus 226 ~~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~ 282 (298)
..+.+...+|+++++..++... .+..+++.+|..++ .+.+.+.+...+
T Consensus 208 ~~r~~i~v~D~~~~~~~~~~~~----~~~~~n~~~~~~~~-----~~~~~~~i~~~~ 255 (312)
T d2b69a1 208 QTRAFQYVSDLVNGLVALMNSN----VSSPVNLGNPEEHT-----ILEFAQLIKNLV 255 (312)
T ss_dssp CEEECEEHHHHHHHHHHHHTSS----CCSCEEESCCCEEE-----HHHHHHHHHHHH
T ss_pred eeEccEEHHHHHHHHHHHHhhc----cCCceEecCCcccc-----hhhHHHHHHHHh
Confidence 1234668899999998887432 25568888887765 344444444444
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.62 E-value=2.2e-14 Score=126.95 Aligned_cols=242 Identities=15% Similarity=0.066 Sum_probs=159.2
Q ss_pred CcEEEEecCCchhHHHHHHHHHH-cCCcEEEEcC---------ChhHHHHHHHHHHhC--------CCCeEEEEccCCCH
Q 022386 12 GKVALLTGGGSGIGFEISLQLGK-HGAAIAIMGR---------RKTVLRSAVAALHSL--------GIPAIGLEGDVRKR 73 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~-~G~~Vv~~~r---------~~~~~~~~~~~~~~~--------~~~~~~~~~Dls~~ 73 (298)
++.||||||+|.||.+++++|++ .|++|+++++ ..+..+.....+... ...+.++.+|++|.
T Consensus 2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~ 81 (383)
T d1gy8a_ 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (383)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence 56799999999999999999986 6899999874 122233333333321 23477889999999
Q ss_pred HHHHHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEE
Q 022386 74 EDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIIN 153 (298)
Q Consensus 74 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~ 153 (298)
+.++++++. +.++|+++|.|+..... ...+.....+++|+.++..+++++...- ..++++
T Consensus 82 ~~l~~~~~~----~~~~d~ViH~Aa~~~~~----~~~~~~~~~~~~N~~~t~~~l~~~~~~~------------~~~~~~ 141 (383)
T d1gy8a_ 82 DFLNGVFTR----HGPIDAVVHMCAFLAVG----ESVRDPLKYYDNNVVGILRLLQAMLLHK------------CDKIIF 141 (383)
T ss_dssp HHHHHHHHH----SCCCCEEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHHTT------------CCEEEE
T ss_pred HHhhhhhhc----cceeehhhccccccccc----ccccccccccccccccccccchhhhccC------------Cccccc
Confidence 998888864 35799999999864321 1223456678899999999988877433 234666
Q ss_pred ecccccccC------------------CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC--
Q 022386 154 ISATLHYTA------------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-- 213 (298)
Q Consensus 154 vss~~~~~~------------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~-- 213 (298)
+++...+.. ..+...|+.+|.+.+.+++.+...+ |+.+..+.|+.+..+.......
T Consensus 142 ~~s~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~----gl~~~~lR~~~vyG~~~~~~~~~~ 217 (383)
T d1gy8a_ 142 SSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY----GIKGICLRYFNACGAHEDGDIGEH 217 (383)
T ss_dssp EEEGGGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEECCCTTSSCSCC
T ss_pred ccccccccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh----CCCEEEEecceeeccCcccccccc
Confidence 655543321 1135679999999999999997775 5999999999887654332211
Q ss_pred ---h----HHHHHHHhh-------------------------------hccCCCCCCHHHHHHHHHHhcCC------CCC
Q 022386 214 ---P----EEIRSKATD-------------------------------YMAAYKFGEKWDIAMAALYLASD------AGK 249 (298)
Q Consensus 214 ---~----~~~~~~~~~-------------------------------~~~~~~~~~~~dva~~~~~L~s~------~~~ 249 (298)
. +.....+.. ....+.+...+|+++++..++.. ...
T Consensus 218 ~~~~~~~ip~ii~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~ 297 (383)
T d1gy8a_ 218 YQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDK 297 (383)
T ss_dssp STTCCSHHHHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTG
T ss_pred ccccchhHHHHHHHHHhhccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhcccccccc
Confidence 0 111111110 01112356789999998877642 123
Q ss_pred CccccEEEeCCCCCCCCCCCCchhHHHhhHHhh
Q 022386 250 YVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAV 282 (298)
Q Consensus 250 ~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~ 282 (298)
...++.+++.+|..++ ...+.+.+.+.+
T Consensus 298 ~~~~~i~Ni~s~~~~s-----~~el~~~i~~~~ 325 (383)
T d1gy8a_ 298 SKYFSVFNLGTSRGYS-----VREVIEVARKTT 325 (383)
T ss_dssp GGSEEEEEESCSCCEE-----HHHHHHHHHHHH
T ss_pred ccCccEEEeCCCCcee-----HHHHHHHHHHHh
Confidence 4457889998887654 344445554443
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.59 E-value=1.2e-14 Score=125.06 Aligned_cols=191 Identities=14% Similarity=0.042 Sum_probs=136.5
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
.|.||||||+|.||.+++++|+++|+.|++++++. .+|+.+.+.++.+++. ..+|
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~--------------------~~~~~~~~~~~~~~~~-----~~~d 56 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------------ELNLLDSRAVHDFFAS-----ERID 56 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------------TCCTTCHHHHHHHHHH-----HCCS
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch--------------------hccccCHHHHHHHHhh-----cCCC
Confidence 47899999999999999999999999988776543 2599999999888763 2799
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC--------
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-------- 163 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~-------- 163 (298)
.++|+|+...... .......+.+++|+.++.++++++...- -.++|++||...+.+.
T Consensus 57 ~v~~~a~~~~~~~---~~~~~~~~~~~~Nv~gt~~ll~~a~~~~------------v~~~i~~SS~~vyg~~~~~~~~E~ 121 (315)
T d1e6ua_ 57 QVYLAAAKVGGIV---ANNTYPADFIYQNMMIESNIIHAAHQND------------VNKLLFLGSSCIYPKLAKQPMAES 121 (315)
T ss_dssp EEEECCCCCCCHH---HHHHCHHHHHHHHHHHHHHHHHHHHHTT------------CCEEEEECCGGGSCTTCCSSBCGG
T ss_pred EEEEcchhccccc---cchhhHHHHHHHHHHHHHHHHHHHHHcC------------CCEEEEECCceEcCCCCCCCccCC
Confidence 9999997532211 1234445678899999999988876532 2459999998765322
Q ss_pred --------CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCCh----HHHH-HHHh--------
Q 022386 164 --------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP----EEIR-SKAT-------- 222 (298)
Q Consensus 164 --------~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~----~~~~-~~~~-------- 222 (298)
+....|+.||.+.+.+++.+..+. |+++..+.|+.+..|........ .... ....
T Consensus 122 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (315)
T d1e6ua_ 122 ELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY----GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPD 197 (315)
T ss_dssp GTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH----CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSE
T ss_pred ccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh----CCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCc
Confidence 123469999999999999998876 59999999999987643322211 1111 0000
Q ss_pred -----hhccCCCCCCHHHHHHHHHHhcCC
Q 022386 223 -----DYMAAYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 223 -----~~~~~~~~~~~~dva~~~~~L~s~ 246 (298)
...+.+.+...+|++.++..++..
T Consensus 198 ~~~~g~g~~~~~~~~v~d~~~~~~~~~~~ 226 (315)
T d1e6ua_ 198 VVVWGSGTPMREFLHVDDMAAASIHVMEL 226 (315)
T ss_dssp EEEESCSCCEECEEEHHHHHHHHHHHHHS
T ss_pred eEEcCCCceEEEEEEeehhHHHHHHhhhh
Confidence 112334567889999999887743
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.59 E-value=8.4e-15 Score=120.57 Aligned_cols=217 Identities=11% Similarity=-0.014 Sum_probs=135.7
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCc--EEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAA--IAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~--Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
++||||||+|+||++++++|+++|+. |+.+.|+.++.+ .....+.++.+|+++.+++.++++ .+
T Consensus 4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~-------~~~~~~~~~~~d~~~~~~~~~~~~-------~~ 69 (252)
T d2q46a1 4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKE-------KIGGEADVFIGDITDADSINPAFQ-------GI 69 (252)
T ss_dssp CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHH-------HTTCCTTEEECCTTSHHHHHHHHT-------TC
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHH-------hccCCcEEEEeeeccccccccccc-------cc
Confidence 69999999999999999999999976 445667754322 234567889999999998887764 78
Q ss_pred cEEEECCCCCCCCC---------CCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccccc
Q 022386 91 DILVNAAAGNFLVP---------AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT 161 (298)
Q Consensus 91 d~li~~ag~~~~~~---------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~ 161 (298)
|.+||+++...... ........+.....+|+.++..+........ .+...+.++.....
T Consensus 70 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~s~~~~~~ 137 (252)
T d2q46a1 70 DALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG------------VKHIVVVGSMGGTN 137 (252)
T ss_dssp SEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT------------CSEEEEEEETTTTC
T ss_pred eeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccc------------ccccccccccccCC
Confidence 99999997532110 0111123345567789999888776665443 35577777665554
Q ss_pred CCCCchhhHH-HHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhccCCCCCCHHHHHHHH
Q 022386 162 ATWYQIHVSA-AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAA 240 (298)
Q Consensus 162 ~~~~~~~Y~~-sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 240 (298)
+......+.. .+.....+...+..+ .|+++..+.||.+..+............. ........+.+.+|+|+++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ilRp~~v~g~~~~~~~~~~~~~~--~~~~~~~~~i~~~Dva~a~ 211 (252)
T d2q46a1 138 PDHPLNKLGNGNILVWKRKAEQYLAD----SGTPYTIIRAGGLLDKEGGVRELLVGKDD--ELLQTDTKTVPRADVAEVC 211 (252)
T ss_dssp TTCGGGGGGGCCHHHHHHHHHHHHHH----SSSCEEEEEECEEECSCTTSSCEEEESTT--GGGGSSCCEEEHHHHHHHH
T ss_pred CCcccccccccchhhhhhhhhhhhhc----ccccceeecceEEECCCcchhhhhhccCc--ccccCCCCeEEHHHHHHHH
Confidence 4433222222 222222233333333 37999999999997654221110000000 0011223467889999999
Q ss_pred HHhcCCCCCCccccEEEeCCCCC
Q 022386 241 LYLASDAGKYVNGNTLIVDGGNW 263 (298)
Q Consensus 241 ~~L~s~~~~~~~G~~i~~dgG~~ 263 (298)
+.++..+. ..|+.+++-++.+
T Consensus 212 ~~~l~~~~--~~g~~~~i~~~~~ 232 (252)
T d2q46a1 212 IQALLFEE--AKNKAFDLGSKPE 232 (252)
T ss_dssp HHHTTCGG--GTTEEEEEEECCT
T ss_pred HHHhCCcc--ccCcEEEEeeCCC
Confidence 99886532 4688998866543
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.58 E-value=4.8e-14 Score=123.14 Aligned_cols=216 Identities=16% Similarity=0.103 Sum_probs=148.2
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
++||+||||||+|.||.++++.|+++|+.|++++|+........+.. .....+.++.+|++|.+.+.++++.. .
T Consensus 6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~i~~~~~Dl~d~~~l~~~~~~~-----~ 79 (356)
T d1rkxa_ 6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETA-RVADGMQSEIGDIRDQNKLLESIREF-----Q 79 (356)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHT-TTTTTSEEEECCTTCHHHHHHHHHHH-----C
T ss_pred hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhh-hcccCCeEEEeeccChHhhhhhhhhc-----h
Confidence 57899999999999999999999999999999999865444333322 22345899999999999999888754 7
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC------
Q 022386 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT------ 163 (298)
Q Consensus 90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~------ 163 (298)
+|+++|.|+.... ....+.....+++|+.++..+++++...-. ...+++.|+.......
T Consensus 80 ~~~v~~~aa~~~~----~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~-----------~~~~~~~s~~~~~~~~~~~~~~ 144 (356)
T d1rkxa_ 80 PEIVFHMAAQPLV----RLSYSEPVETYSTNVMGTVYLLEAIRHVGG-----------VKAVVNITSDKCYDNKEWIWGY 144 (356)
T ss_dssp CSEEEECCSCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHHHCC-----------CCEEEEECCGGGBCCCCSSSCB
T ss_pred hhhhhhhhccccc----cccccCCccccccccccchhhhhhhhcccc-----------cccccccccccccccccccccc
Confidence 8999999985321 112345577899999999999988875332 2335555554433221
Q ss_pred ------CCchhhHHHHHHHHHHHHHHHHHhcC-----CCCeEEEEEeCCcccCCcccCcC-ChHHHHHHHhhhcc-----
Q 022386 164 ------WYQIHVSAAKAAVDSITRSLALEWGT-----DYAIRVNGIAPGPIKDTAGVSKL-APEEIRSKATDYMA----- 226 (298)
Q Consensus 164 ------~~~~~Y~~sK~a~~~l~~~la~e~~~-----~~girv~~i~PG~v~t~~~~~~~-~~~~~~~~~~~~~~----- 226 (298)
.+...|+.+|.+.+.+++..+.++.. ..++.+..+.|+.+..+...... ....+........+
T Consensus 145 ~~~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~ 224 (356)
T d1rkxa_ 145 RENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRN 224 (356)
T ss_dssp CTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSC
T ss_pred ccccccCCCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEee
Confidence 13456999999999999998887631 23688999999988765432211 11222222222211
Q ss_pred ---CCCCCCHHHHHHHHHHhcCC
Q 022386 227 ---AYKFGEKWDIAMAALYLASD 246 (298)
Q Consensus 227 ---~~~~~~~~dva~~~~~L~s~ 246 (298)
.+.+....|++.++..++..
T Consensus 225 ~~~~~~~~~v~D~~~a~~~~~~~ 247 (356)
T d1rkxa_ 225 PHAIRPWQHVLEPLSGYLLLAQK 247 (356)
T ss_dssp TTCEECCEETHHHHHHHHHHHHH
T ss_pred ccccccccccccccchhhhhhhh
Confidence 12345678999998776643
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.52 E-value=1.2e-14 Score=119.82 Aligned_cols=196 Identities=15% Similarity=0.097 Sum_probs=131.1
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC--cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.|++|+||||||||.||+++++.|+++|. +|++++|+...... .....+....+|+.+.+++...
T Consensus 11 ~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~------~~~~~i~~~~~D~~~~~~~~~~------- 77 (232)
T d2bkaa1 11 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE------EAYKNVNQEVVDFEKLDDYASA------- 77 (232)
T ss_dssp HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS------GGGGGCEEEECCGGGGGGGGGG-------
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc------cccceeeeeeeccccccccccc-------
Confidence 46789999999999999999999999996 79999997532111 1123467777888876655443
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ 166 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~ 166 (298)
+...|+++|++|.. ..........++|+.++..+.+.+.. .+ -.++|++|+....... .
T Consensus 78 ~~~~d~vi~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~a~~----~~--------v~~fi~~Ss~~~~~~~--~ 136 (232)
T d2bkaa1 78 FQGHDVGFCCLGTT-------RGKAGAEGFVRVDRDYVLKSAELAKA----GG--------CKHFNLLSSKGADKSS--N 136 (232)
T ss_dssp GSSCSEEEECCCCC-------HHHHHHHHHHHHHTHHHHHHHHHHHH----TT--------CCEEEEECCTTCCTTC--S
T ss_pred cccccccccccccc-------ccccchhhhhhhcccccceeeecccc----cC--------ccccccCCccccccCc--c
Confidence 35799999999842 12345566788899999998887643 22 3569999987765433 4
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCe-EEEEEeCCcccCCcccCcCChHHHHHHHhhhc----cCCCCCCHHHHHHHHH
Q 022386 167 IHVSAAKAAVDSITRSLALEWGTDYAI-RVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM----AAYKFGEKWDIAMAAL 241 (298)
Q Consensus 167 ~~Y~~sK~a~~~l~~~la~e~~~~~gi-rv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~dva~~~~ 241 (298)
..|+.+|...+...+. + +. ++..+.||.+..+.... ...+.....+.... ......+.+|+|++++
T Consensus 137 ~~Y~~~K~~~E~~l~~----~----~~~~~~IlRP~~i~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i 207 (232)
T d2bkaa1 137 FLYLQVKGEVEAKVEE----L----KFDRYSVFRPGVLLCDRQES-RPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAML 207 (232)
T ss_dssp SHHHHHHHHHHHHHHT----T----CCSEEEEEECCEEECTTGGG-SHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHH
T ss_pred chhHHHHHHhhhcccc----c----cccceEEecCceeecCCCcC-cHHHHHHHHHhhccCCcccCCCeEEHHHHHHHHH
Confidence 5699999887765542 2 33 46778999997653221 11122222222211 1223457799999988
Q ss_pred HhcCCC
Q 022386 242 YLASDA 247 (298)
Q Consensus 242 ~L~s~~ 247 (298)
.++..+
T Consensus 208 ~~~~~~ 213 (232)
T d2bkaa1 208 NNVVRP 213 (232)
T ss_dssp HHHTSC
T ss_pred HHHhcC
Confidence 877543
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.35 E-value=7.8e-12 Score=105.03 Aligned_cols=208 Identities=14% Similarity=0.102 Sum_probs=134.9
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
+.+|||||||.||.+++++|.++|++|+.++|+. +|++|.++++++++.. ++|+
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~---------------------~D~~d~~~~~~~l~~~-----~~d~ 55 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------------LDITNVLAVNKFFNEK-----KPNV 55 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------------CCTTCHHHHHHHHHHH-----CCSE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh---------------------ccCCCHHHHHHHHHHc-----CCCE
Confidence 4699999999999999999999999999998863 4999999999888754 7899
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccC----------
Q 022386 93 LVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA---------- 162 (298)
Q Consensus 93 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~---------- 162 (298)
+||+|+..... .........+..|+.....+........ ..+++.|+...+..
T Consensus 56 vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~~~~~~~~-------------~~~~~~ss~~v~~~~~~~~~~e~~ 118 (281)
T d1vl0a_ 56 VINCAAHTAVD----KCEEQYDLAYKINAIGPKNLAAAAYSVG-------------AEIVQISTDYVFDGEAKEPITEFD 118 (281)
T ss_dssp EEECCCCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHHHT-------------CEEEEEEEGGGSCSCCSSCBCTTS
T ss_pred EEeeccccccc----cccccchhhccccccccccccccccccc-------------ccccccccceeeeccccccccccc
Confidence 99999853211 1123335566677777766655544332 33555555433211
Q ss_pred -CCCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCChHHHHHHHhhhc-------cCCCCCCHH
Q 022386 163 -TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM-------AAYKFGEKW 234 (298)
Q Consensus 163 -~~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 234 (298)
..+...|+.+|...+.+++.. +.+...+.|+.+..+... ....+........ ..+.+...+
T Consensus 119 ~~~~~~~~~~~k~~~e~~~~~~--------~~~~~i~R~~~vyG~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 187 (281)
T d1vl0a_ 119 EVNPQSAYGKTKLEGENFVKAL--------NPKYYIVRTAWLYGDGNN---FVKTMINLGKTHDELKVVHDQVGTPTSTV 187 (281)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHH--------CSSEEEEEECSEESSSSC---HHHHHHHHHHHCSEEEEESSCEECCEEHH
T ss_pred cccchhhhhhhhhHHHHHHHHh--------CCCccccceeEEeCCCcc---cccchhhhhccCCceeecCCceeccchhh
Confidence 124567888888877666432 467778999999765321 1122222222211 123567899
Q ss_pred HHHHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhh
Q 022386 235 DIAMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVE 283 (298)
Q Consensus 235 dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~ 283 (298)
|+++++.+++.... +| .+++.++..++ ...+.+.+.+.+.
T Consensus 188 D~~~~~~~~~~~~~---~g-~~~~~~~~~~s-----~~e~~~~i~~~~g 227 (281)
T d1vl0a_ 188 DLARVVLKVIDEKN---YG-TFHCTCKGICS-----WYDFAVEIFRLTG 227 (281)
T ss_dssp HHHHHHHHHHHHTC---CE-EEECCCBSCEE-----HHHHHHHHHHHHC
T ss_pred hhhhhhhhhhhhcc---cC-ceeEeCCCccc-----hHHHHHHHHHHhC
Confidence 99999999985432 35 67777776554 3444444444443
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.27 E-value=1.3e-11 Score=104.83 Aligned_cols=223 Identities=17% Similarity=0.102 Sum_probs=124.8
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhH--HH--HHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTV--LR--SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~--~~--~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
++||||||||.||++++++|+++|++|+++.|+... .. .....+. ...+.++.+|+++.+++.+.+.
T Consensus 4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~--~~~v~~v~~d~~d~~~~~~~~~------- 74 (312)
T d1qyda_ 4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK--QLGAKLIEASLDDHQRLVDALK------- 74 (312)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH--TTTCEEECCCSSCHHHHHHHHT-------
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhc--cCCcEEEEeecccchhhhhhcc-------
Confidence 469999999999999999999999999999997432 11 1122222 3458889999999988877665
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC-----
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----- 163 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~----- 163 (298)
..+.++++++..... .|..+...++.++ .+.. ..++++.||.......
T Consensus 75 ~~~~~~~~~~~~~~~---------------~~~~~~~~~l~~a----~~~~--------~~~~v~~Ss~g~~~~~~~~~~ 127 (312)
T d1qyda_ 75 QVDVVISALAGGVLS---------------HHILEQLKLVEAI----KEAG--------NIKRFLPSEFGMDPDIMEHAL 127 (312)
T ss_dssp TCSEEEECCCCSSSS---------------TTTTTHHHHHHHH----HHSC--------CCSEEECSCCSSCTTSCCCCC
T ss_pred Ccchhhhhhhhcccc---------------cchhhhhHHHHHH----HHhc--------CCcEEEEeeccccCCCccccc
Confidence 678888888743221 2222333333332 2222 2446666665332211
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCc-------CChHHHHHHHhhhccCCCCCCHHHH
Q 022386 164 WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK-------LAPEEIRSKATDYMAAYKFGEKWDI 236 (298)
Q Consensus 164 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~dv 236 (298)
.....|..+|..+.. ...+ .++....+.|+.+..+..... ..................+.+.+|+
T Consensus 128 ~~~~~~~~~~~~~~~----~~~~----~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv 199 (312)
T d1qyda_ 128 QPGSITFIDKRKVRR----AIEA----ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDV 199 (312)
T ss_dssp SSTTHHHHHHHHHHH----HHHH----TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHH
T ss_pred chhhhhhHHHHHHHH----hhcc----cccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHH
Confidence 122344555544433 3223 257777788887753211000 0000000000111122336788999
Q ss_pred HHHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhhhc
Q 022386 237 AMAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERK 285 (298)
Q Consensus 237 a~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~~~ 285 (298)
|+++..++..+ ...++..+.+.++..++ .+.+++.+.+.+.++
T Consensus 200 a~a~~~~l~~~-~~~~~~~~~~~~~~~~s-----~~e~~~~~~~~~g~~ 242 (312)
T d1qyda_ 200 GTYTIKSIDDP-QTLNKTMYIRPPMNILS-----QKEVIQIWERLSEQN 242 (312)
T ss_dssp HHHHHHHTTCG-GGSSSEEECCCGGGEEE-----HHHHHHHHHHHHTCC
T ss_pred HHHHHHHhcCc-cccCceEEEeCCCcCCC-----HHHHHHHHHHHHCCC
Confidence 99999888653 22333344455554443 455555555554433
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.26 E-value=2.6e-11 Score=102.35 Aligned_cols=211 Identities=15% Similarity=0.050 Sum_probs=120.2
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHH--HHHHHHh-CCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRS--AVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~--~~~~~~~-~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
.|+||||||||.||+++++.|+++|++|++++|+...... ....+.. ....+.++.+|+.+.......++
T Consensus 3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------- 75 (307)
T d1qyca_ 3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK------- 75 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-------
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhh-------
Confidence 4789999999999999999999999999999997433211 1122222 23457888999999988777765
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchh
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 168 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~ 168 (298)
..+.++++++.. +..+...+.+++... . ...+++.|+............
T Consensus 76 ~~~~vi~~~~~~-------------------~~~~~~~~~~a~~~~----~--------~~~~~~~s~~~~~~~~~~~~~ 124 (307)
T d1qyca_ 76 NVDVVISTVGSL-------------------QIESQVNIIKAIKEV----G--------TVKRFFPSEFGNDVDNVHAVE 124 (307)
T ss_dssp TCSEEEECCCGG-------------------GSGGGHHHHHHHHHH----C--------CCSEEECSCCSSCTTSCCCCT
T ss_pred hceeeeeccccc-------------------ccchhhHHHHHHHHh----c--------cccceeeeccccccccccccc
Confidence 678899988642 111223333333322 2 233667666544433333333
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcC------ChHHHHHHHhhhccCCCCCCHHHHHHHHHH
Q 022386 169 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL------APEEIRSKATDYMAAYKFGEKWDIAMAALY 242 (298)
Q Consensus 169 Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 242 (298)
+...+............+. ++....+.|+.+..+...... .................+...+|+|+++..
T Consensus 125 ~~~~~~~~~~~~~~~~~~~----~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~ 200 (307)
T d1qyca_ 125 PAKSVFEVKAKVRRAIEAE----GIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIK 200 (307)
T ss_dssp THHHHHHHHHHHHHHHHHH----TCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHT
T ss_pred cccccccccccccchhhcc----CCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHH
Confidence 3333333333333333332 577788888887643211100 000000001111122346789999999999
Q ss_pred hcCCCCCCccccEEEeCCCCCCC
Q 022386 243 LASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 243 L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
++..+. ..++..+++.++..++
T Consensus 201 ~l~~~~-~~~~~~~~~~~~~~~s 222 (307)
T d1qyca_ 201 AVDDPR-TLNKTLYLRLPANTLS 222 (307)
T ss_dssp TSSCGG-GTTEEEECCCGGGEEE
T ss_pred HhcChh-hcCceeEEeCCCCccC
Confidence 986542 2334444445555543
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.21 E-value=6.5e-12 Score=101.55 Aligned_cols=189 Identities=16% Similarity=0.107 Sum_probs=115.2
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCC--cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
.|++|||||||.||++++++|+++|. .|++..|+... ...+ +..+..|..++.. ...+.
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~----------~~~~---~~~~~~d~~~~~~------~~~~~ 62 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------EHPR---LDNPVGPLAELLP------QLDGS 62 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------CCTT---EECCBSCHHHHGG------GCCSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh----------hccc---ccccccchhhhhh------ccccc
Confidence 48999999999999999999999998 56666665321 1112 3344555443322 22357
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCCchhh
Q 022386 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHV 169 (298)
Q Consensus 90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~~~~Y 169 (298)
+|.+|+++|..... ...-....++|+.++..+++++. +.+ -.+++++|+...... ....|
T Consensus 63 ~d~vi~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~a~----~~~--------v~~~i~~Ss~~~~~~--~~~~y 122 (212)
T d2a35a1 63 IDTAFCCLGTTIKE------AGSEEAFRAVDFDLPLAVGKRAL----EMG--------ARHYLVVSALGADAK--SSIFY 122 (212)
T ss_dssp CSEEEECCCCCHHH------HSSHHHHHHHHTHHHHHHHHHHH----HTT--------CCEEEEECCTTCCTT--CSSHH
T ss_pred hheeeeeeeeeccc------cccccccccchhhhhhhcccccc----ccc--------ccccccccccccccc--cccch
Confidence 99999999853211 11235677889999988888764 222 356999998766533 34579
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCe-EEEEEeCCcccCCcccCcCChHHHHHHHhhhccC-CCCCCHHHHHHHHHHhcCCC
Q 022386 170 SAAKAAVDSITRSLALEWGTDYAI-RVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAA-YKFGEKWDIAMAALYLASDA 247 (298)
Q Consensus 170 ~~sK~a~~~l~~~la~e~~~~~gi-rv~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~L~s~~ 247 (298)
..+|...+..++ + .+. +...+.|+.+..+...... ............+. ....+.+|+|+++..++..+
T Consensus 123 ~~~K~~~E~~l~----~----~~~~~~~I~Rp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~ 193 (212)
T d2a35a1 123 NRVKGELEQALQ----E----QGWPQLTIARPSLLFGPREEFRL-AEILAAPIARILPGKYHGIEACDLARALWRLALEE 193 (212)
T ss_dssp HHHHHHHHHHHT----T----SCCSEEEEEECCSEESTTSCEEG-GGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCC
T ss_pred hHHHHHHhhhcc----c----cccccceeeCCcceeCCcccccH-HHHHHHHHhhccCCCCcEEEHHHHHHHHHHHHcCC
Confidence 999987766543 2 233 5778899999754321110 00000000000000 01246789999999988654
Q ss_pred C
Q 022386 248 G 248 (298)
Q Consensus 248 ~ 248 (298)
.
T Consensus 194 ~ 194 (212)
T d2a35a1 194 G 194 (212)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.20 E-value=9.6e-11 Score=101.74 Aligned_cols=223 Identities=14% Similarity=0.071 Sum_probs=127.5
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHH-HHHHHHHHHHhCC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDA-VRVVESTINHFGK 89 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~-~~~~~~~~~~~~~ 89 (298)
+.|+|+||||||.||.+++++|+++|++|+++.|+..+... ..+.. ...+..+++|++|..++ +.+ +..
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~~-~~~v~~~~gD~~d~~~~~~~a-------~~~ 71 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQA-IPNVTLFQGPLLNNVPLMDTL-------FEG 71 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHT-STTEEEEESCCTTCHHHHHHH-------HTT
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhcc-cCCCEEEEeeCCCcHHHHHHH-------hcC
Confidence 46899999999999999999999999999999998654322 22222 24588999999986543 333 347
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC--CCch
Q 022386 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--WYQI 167 (298)
Q Consensus 90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~--~~~~ 167 (298)
.|.++.+...... .++....+++.++. +.+ -.+++..||....... ....
T Consensus 72 ~~~~~~~~~~~~~----------------~~~~~~~~~~~aa~----~ag--------v~~~v~~Ss~~~~~~~~~~~~~ 123 (350)
T d1xgka_ 72 AHLAFINTTSQAG----------------DEIAIGKDLADAAK----RAG--------TIQHYIYSSMPDHSLYGPWPAV 123 (350)
T ss_dssp CSEEEECCCSTTS----------------CHHHHHHHHHHHHH----HHS--------CCSEEEEEECCCGGGTSSCCCC
T ss_pred CceEEeecccccc----------------hhhhhhhHHHHHHH----HhC--------CCceEEEeeccccccCCcccch
Confidence 7877776542111 12222333444433 222 2347777776543322 2344
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC---hHHHHHH-HhhhccCC-----CCCC-HHHHH
Q 022386 168 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA---PEEIRSK-ATDYMAAY-----KFGE-KWDIA 237 (298)
Q Consensus 168 ~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~---~~~~~~~-~~~~~~~~-----~~~~-~~dva 237 (298)
.|..+|.....+.+ ..++....+.|+.+.......... ....... ..-..+.. .+.+ .+|++
T Consensus 124 ~~~~~k~~~~~~~~--------~~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva 195 (350)
T d1xgka_ 124 PMWAPKFTVENYVR--------QLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVG 195 (350)
T ss_dssp TTTHHHHHHHHHHH--------TSSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHH
T ss_pred hhhhhHHHHHHHHH--------hhccCceeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHH
Confidence 56677766655433 225677788888764321101000 0000000 00000110 0123 47899
Q ss_pred HHHHHhcCCCCCCccccEEEeCCCCCCCCCCCCchhHHHhhHHhhhhc
Q 022386 238 MAALYLASDAGKYVNGNTLIVDGGNWLSNPRDLPKEAVNQLSRAVERK 285 (298)
Q Consensus 238 ~~~~~L~s~~~~~~~G~~i~~dgG~~~~~~~~~~~~~~~~~~~~~~~~ 285 (298)
+++..++.+......|+.+.+.|. .++ .+.+.+.+.+.+.++
T Consensus 196 ~~v~~~l~~~~~~~~G~~~~~~g~-~~T-----~~eia~~l~~~~G~~ 237 (350)
T d1xgka_ 196 PALLQIFKDGPQKWNGHRIALTFE-TLS-----PVQVCAAFSRALNRR 237 (350)
T ss_dssp HHHHHHHHHCHHHHTTCEEEECSE-EEC-----HHHHHHHHHHHHTSC
T ss_pred HHHHHHHhCChhhcCCeEEEEeCC-cCC-----HHHHHHHHHHHHCCc
Confidence 999888865445567999988764 444 455566665555543
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.08 E-value=9.3e-11 Score=98.92 Aligned_cols=129 Identities=18% Similarity=0.201 Sum_probs=91.5
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l 93 (298)
.+|||||+|.||.++++.|.++|.. +.++++... +.+|++|.+.++++++.. ++|++
T Consensus 2 KILItG~tGfiG~~l~~~L~~~g~~-v~~~~~~~~-----------------~~~Dl~~~~~~~~~i~~~-----~~D~V 58 (298)
T d1n2sa_ 2 NILLFGKTGQVGWELQRSLAPVGNL-IALDVHSKE-----------------FCGDFSNPKGVAETVRKL-----RPDVI 58 (298)
T ss_dssp EEEEECTTSHHHHHHHHHTTTTSEE-EEECTTCSS-----------------SCCCTTCHHHHHHHHHHH-----CCSEE
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCE-EEEECCCcc-----------------ccCcCCCHHHHHHHHHHc-----CCCEE
Confidence 5999999999999999999999864 444444321 357999999999988764 69999
Q ss_pred EECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC----------
Q 022386 94 VNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT---------- 163 (298)
Q Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~---------- 163 (298)
||+||....... . +.-...+++|+.++..+.+++.. . +.+++++||...+...
T Consensus 59 ih~Aa~~~~~~~-~---~~~~~~~~~n~~~~~~l~~~~~~----~---------~~~~~~~ss~~~~~~~~~~~~~E~~~ 121 (298)
T d1n2sa_ 59 VNAAAHTAVDKA-E---SEPELAQLLNATSVEAIAKAANE----T---------GAWVVHYSTDYVFPGTGDIPWQETDA 121 (298)
T ss_dssp EECCCCCCHHHH-T---TCHHHHHHHHTHHHHHHHHHHTT----T---------TCEEEEEEEGGGSCCCTTCCBCTTSC
T ss_pred EEeccccccccc-c---cCccccccccccccccchhhhhc----c---------ccccccccccccccCCCCCCCccccc
Confidence 999986532111 1 22256778999999888877642 1 3557777776544221
Q ss_pred -CCchhhHHHHHHHHHHHHH
Q 022386 164 -WYQIHVSAAKAAVDSITRS 182 (298)
Q Consensus 164 -~~~~~Y~~sK~a~~~l~~~ 182 (298)
.+...|+.+|.+.+.+.+.
T Consensus 122 ~~p~~~y~~~k~~~e~~~~~ 141 (298)
T d1n2sa_ 122 TSPLNVYGKTKLAGEKALQD 141 (298)
T ss_dssp CCCSSHHHHHHHHHHHHHHH
T ss_pred cCCCchHhhhhhhhhhhHHh
Confidence 1345799999887766543
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.01 E-value=1e-09 Score=92.57 Aligned_cols=213 Identities=16% Similarity=0.121 Sum_probs=126.3
Q ss_pred EEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH--HhCCcc
Q 022386 15 ALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN--HFGKLD 91 (298)
Q Consensus 15 ~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~--~~~~id 91 (298)
||||||+|.||.++++.|+++|. .|+++++-.... +.. .+.+. ..+|..+.+. ..+.... .+..++
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~-~~~-~~~~~------~~~~~~~~~~---~~~~~~~~~~~~~~~ 70 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT-KFV-NLVDL------NIADYMDKED---FLIQIMAGEEFGDVE 70 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGG-GGH-HHHTS------CCSEEEEHHH---HHHHHHTTCCCSSCC
T ss_pred EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcc-hhh-ccccc------chhhhccchH---HHHHHhhhhcccchh
Confidence 79999999999999999999997 687776332211 111 11111 1223333333 2333322 346788
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC--------
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-------- 163 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~-------- 163 (298)
+++|.|+..... ..+ .+.....|+.+...+.+++...-. ++++.||.....+.
T Consensus 71 ~i~~~aa~~~~~---~~~---~~~~~~~~~~~~~~~l~~~~~~~i-------------~~v~~ss~~~~~~~~~~~~~~~ 131 (307)
T d1eq2a_ 71 AIFHEGACSSTT---EWD---GKYMMDNNYQYSKELLHYCLEREI-------------PFLYASSAATYGGRTSDFIESR 131 (307)
T ss_dssp EEEECCSCCCTT---CCC---HHHHHHHTHHHHHHHHHHHHHHTC-------------CEEEEEEGGGGTTCCSCBCSSG
T ss_pred hhhhhccccccc---ccc---cccccccccccccccccccccccc-------------cccccccccccccccccccccc
Confidence 899988743221 122 344567788888888776554322 25555554443222
Q ss_pred ---CCchhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCcccCCcccCcCC----hHHHHHHHh----------hhcc
Q 022386 164 ---WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA----PEEIRSKAT----------DYMA 226 (298)
Q Consensus 164 ---~~~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i~PG~v~t~~~~~~~~----~~~~~~~~~----------~~~~ 226 (298)
.+...|+.+|.+.+.+++.+..+. ++.+..+.|..+..+....... ...+...+. ....
T Consensus 132 ~~~~~~~~Y~~~K~~~e~~~~~~~~~~----~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 207 (307)
T d1eq2a_ 132 EYEKPLNVYGYSKFLFDEYVRQILPEA----NSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENF 207 (307)
T ss_dssp GGCCCSSHHHHHHHHHHHHHHHHGGGC----SSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------
T ss_pred cccccccccccccchhhhhcccccccc----ccccccccceeEeeccccccccccccccccccccccccceeeecCccce
Confidence 245689999999999999886553 5888889998887654322111 111112111 1112
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCCccccEEEeCCCCCCC
Q 022386 227 AYKFGEKWDIAMAALYLASDAGKYVNGNTLIVDGGNWLS 265 (298)
Q Consensus 227 ~~~~~~~~dva~~~~~L~s~~~~~~~G~~i~~dgG~~~~ 265 (298)
.+.+...+|++.++..++.... ...+++.+|...+
T Consensus 208 ~r~~~~v~d~~~~~~~~~~~~~----~~~~~~~~~~~~s 242 (307)
T d1eq2a_ 208 KRDFVYVGDVADVNLWFLENGV----SGIFNLGTGRAES 242 (307)
T ss_dssp CBCEEEHHHHHHHHHHHHHHCC----CEEEEESCSCCBC
T ss_pred eeeeeecccHHHHHHHHhhhcc----ccccccccccchh
Confidence 2356678899999988775432 3467887776554
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.90 E-value=2.6e-14 Score=114.38 Aligned_cols=46 Identities=24% Similarity=0.394 Sum_probs=41.8
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL 59 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~ 59 (298)
++.|+||+|++|+++|+.|+++|++|++.+|+.++++++.+++...
T Consensus 2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~ 47 (212)
T d1jaya_ 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRI 47 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc
Confidence 5778899999999999999999999999999999999998888654
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=98.10 E-value=1.8e-05 Score=61.23 Aligned_cols=84 Identities=23% Similarity=0.279 Sum_probs=63.8
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHH---HHhCCCCeEEEEccCCCHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAA---LHSLGIPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~---~~~~~~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
-++++|+++|.|+ ||.|++++..|++.|. .++++.|+.+..++.... +.... ......+|+.+.+++.....
T Consensus 14 ~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-- 89 (182)
T d1vi2a1 14 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENT-DCVVTVTDLADQQAFAEALA-- 89 (182)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS-SCEEEEEETTCHHHHHHHHH--
T ss_pred CCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhc-CcceEeeecccccchhhhhc--
Confidence 3789999999998 6899999999999999 588999987766655443 33322 23345678998887766543
Q ss_pred HHHhCCccEEEECCCCC
Q 022386 84 INHFGKLDILVNAAAGN 100 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~ 100 (298)
..|++||+....
T Consensus 90 -----~~diiIN~Tp~G 101 (182)
T d1vi2a1 90 -----SADILTNGTKVG 101 (182)
T ss_dssp -----TCSEEEECSSTT
T ss_pred -----ccceeccccCCc
Confidence 789999998653
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=97.87 E-value=6.4e-05 Score=56.66 Aligned_cols=74 Identities=20% Similarity=0.286 Sum_probs=56.4
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.+|++++++|.|+ |++|+.++++|..+|+ ++.++.|+.++.+++.+.+. . ... ++ +++...+
T Consensus 20 ~~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~---~--~~~--~~---~~~~~~l------ 82 (159)
T d1gpja2 20 GSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG---G--EAV--RF---DELVDHL------ 82 (159)
T ss_dssp SCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT---C--EEC--CG---GGHHHHH------
T ss_pred CCcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhh---c--ccc--cc---hhHHHHh------
Confidence 4789999999998 9999999999999999 58899999888777777653 2 222 22 2333332
Q ss_pred hCCccEEEECCCC
Q 022386 87 FGKLDILVNAAAG 99 (298)
Q Consensus 87 ~~~id~li~~ag~ 99 (298)
...|++|++.+.
T Consensus 83 -~~~Divi~atss 94 (159)
T d1gpja2 83 -ARSDVVVSATAA 94 (159)
T ss_dssp -HTCSEEEECCSS
T ss_pred -ccCCEEEEecCC
Confidence 379999999873
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.82 E-value=3.8e-05 Score=58.66 Aligned_cols=75 Identities=16% Similarity=0.108 Sum_probs=56.0
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
++|.++|.|+ |.+|+.+|++|+++|++|++++|+.++.+++.+. .........+..+.......+. ..
T Consensus 1 ~~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~----~~~~~~~~~~~~~~~~~~~~i~-------~~ 68 (182)
T d1e5qa1 1 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAG----VQHSTPISLDVNDDAALDAEVA-------KH 68 (182)
T ss_dssp CCCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTT----CTTEEEEECCTTCHHHHHHHHT-------TS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhc----ccccccccccccchhhhHhhhh-------cc
Confidence 4689999987 9999999999999999999999998877665443 3344555566666666655543 56
Q ss_pred cEEEECC
Q 022386 91 DILVNAA 97 (298)
Q Consensus 91 d~li~~a 97 (298)
|.++...
T Consensus 69 ~~~i~~~ 75 (182)
T d1e5qa1 69 DLVISLI 75 (182)
T ss_dssp SEEEECS
T ss_pred ceeEeec
Confidence 6666554
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=97.81 E-value=1.2e-05 Score=62.20 Aligned_cols=79 Identities=11% Similarity=0.170 Sum_probs=56.1
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|.+++|+||++++|.+.+......|++|+.+.++.++. +.+.+.+.+..+ |-++++..+...+.. ....+
T Consensus 29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~----~~~~~~Ga~~vi---~~~~~~~~~~~~~~~--~~~Gv 99 (182)
T d1v3va2 29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKI----AYLKQIGFDAAF---NYKTVNSLEEALKKA--SPDGY 99 (182)
T ss_dssp SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH----HHHHHTTCSEEE---ETTSCSCHHHHHHHH--CTTCE
T ss_pred CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHH----HHHHhhhhhhhc---ccccccHHHHHHHHh--hcCCC
Confidence 489999999999999999999999999999999886543 334445554433 334433333333322 12479
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|+++++.|
T Consensus 100 d~v~D~vG 107 (182)
T d1v3va2 100 DCYFDNVG 107 (182)
T ss_dssp EEEEESSC
T ss_pred ceeEEecC
Confidence 99999997
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=97.77 E-value=2.8e-05 Score=60.45 Aligned_cols=86 Identities=22% Similarity=0.210 Sum_probs=58.9
Q ss_pred CcEEEE-ecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH-HhCC
Q 022386 12 GKVALL-TGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN-HFGK 89 (298)
Q Consensus 12 gk~~lV-tG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~-~~~~ 89 (298)
|.+++| +||+|++|.+.+......|++|+++.++.+..++..+.+++.|.+..+.. |-.+..+....+.++.. ..+.
T Consensus 29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~~-~~~~~~~~~~~v~~~~~~~g~~ 107 (189)
T d1gu7a2 29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITE-DQNNSREFGPTIKEWIKQSGGE 107 (189)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEH-HHHHCGGGHHHHHHHHHHHTCC
T ss_pred CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEEec-cccchhHHHHHHHHHHhhccCC
Confidence 555555 79999999999988888999999998888777888788877776554321 11111122333333333 3458
Q ss_pred ccEEEECCC
Q 022386 90 LDILVNAAA 98 (298)
Q Consensus 90 id~li~~ag 98 (298)
+|+++++.|
T Consensus 108 vdvv~D~vg 116 (189)
T d1gu7a2 108 AKLALNCVG 116 (189)
T ss_dssp EEEEEESSC
T ss_pred ceEEEECCC
Confidence 999999876
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.77 E-value=2.5e-05 Score=59.89 Aligned_cols=79 Identities=15% Similarity=0.167 Sum_probs=55.0
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|.++||+||+|++|...++.....|++|+++.++.++.+ .+.+.|.+-. .|.++++-.+++.+... -..+
T Consensus 28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~----~~~~~Ga~~v---i~~~~~~~~~~i~~~t~--~~g~ 98 (174)
T d1yb5a2 28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQK----IVLQNGAHEV---FNHREVNYIDKIKKYVG--EKGI 98 (174)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH----HHHHTTCSEE---EETTSTTHHHHHHHHHC--TTCE
T ss_pred CCCEEEEEeccccccccccccccccCcccccccccccccc----cccccCcccc---cccccccHHHHhhhhhc--cCCc
Confidence 5889999999999999999998899999999888765443 2334454432 36666543333333221 1369
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|+++.+.|
T Consensus 99 d~v~d~~g 106 (174)
T d1yb5a2 99 DIIIEMLA 106 (174)
T ss_dssp EEEEESCH
T ss_pred eEEeeccc
Confidence 99998876
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=97.73 E-value=7.3e-05 Score=56.98 Aligned_cols=77 Identities=21% Similarity=0.244 Sum_probs=58.5
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
.+++||.++|.|+ ||.+++++..|.+.|++|.++.|+.++.+++.+.+...+ .+..+ +..+. ..
T Consensus 14 ~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~-~~~~~--~~~~~------------~~ 77 (170)
T d1nyta1 14 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-SIQAL--SMDEL------------EG 77 (170)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-SEEEC--CSGGG------------TT
T ss_pred CCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcc-ccccc--ccccc------------cc
Confidence 3678999999987 788999999999999999999999998888888776543 23332 22211 12
Q ss_pred CCccEEEECCCCC
Q 022386 88 GKLDILVNAAAGN 100 (298)
Q Consensus 88 ~~id~li~~ag~~ 100 (298)
...|++||+....
T Consensus 78 ~~~dliIN~Tp~G 90 (170)
T d1nyta1 78 HEFDLIINATSSG 90 (170)
T ss_dssp CCCSEEEECCSCG
T ss_pred cccceeecccccC
Confidence 4789999998643
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=97.66 E-value=3.7e-05 Score=59.07 Aligned_cols=79 Identities=14% Similarity=0.107 Sum_probs=56.6
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|++++|+||++++|..++......|++|++++++.++.+... +.|.+. .+|.++++-.+++ .++. .-..+
T Consensus 28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~----~lGa~~---vi~~~~~d~~~~v-~~~t-~g~g~ 98 (179)
T d1qora2 28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL----KAGAWQ---VINYREEDLVERL-KEIT-GGKKV 98 (179)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----HHTCSE---EEETTTSCHHHHH-HHHT-TTCCE
T ss_pred CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH----hcCCeE---EEECCCCCHHHHH-HHHh-CCCCe
Confidence 4889999999999999999999999999999999987655433 334432 2366665433333 3222 22478
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|+++.+.|
T Consensus 99 d~v~d~~g 106 (179)
T d1qora2 99 RVVYDSVG 106 (179)
T ss_dssp EEEEECSC
T ss_pred EEEEeCcc
Confidence 99999887
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=97.65 E-value=0.00021 Score=54.11 Aligned_cols=81 Identities=21% Similarity=0.287 Sum_probs=55.4
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC-C
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG-K 89 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~-~ 89 (298)
.|.+++|+| +|++|...+..+...|++|++++++.++++.. ++.+.+..+. .|-.+ ++.....+.+.+.+| .
T Consensus 26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a----~~~ga~~~~~-~~~~~-~~~~~~~~~~~~~~g~g 98 (170)
T d1e3ja2 26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVA----KNCGADVTLV-VDPAK-EEESSIIERIRSAIGDL 98 (170)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHTTCSEEEE-CCTTT-SCHHHHHHHHHHHSSSC
T ss_pred CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHH----HHcCCcEEEe-ccccc-cccchhhhhhhcccccC
Confidence 478999997 68999999998889999999999998765433 3334443332 22221 223344444544443 7
Q ss_pred ccEEEECCC
Q 022386 90 LDILVNAAA 98 (298)
Q Consensus 90 id~li~~ag 98 (298)
+|++|.++|
T Consensus 99 ~D~vid~~g 107 (170)
T d1e3ja2 99 PNVTIDCSG 107 (170)
T ss_dssp CSEEEECSC
T ss_pred CceeeecCC
Confidence 999999998
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=97.64 E-value=0.00019 Score=54.68 Aligned_cols=78 Identities=15% Similarity=0.214 Sum_probs=59.2
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
.++++|.++|.|+ ||.+++++..|.+.+.+|+++.|+.++.+.+.+.+.... ++..+..|-. ..
T Consensus 14 ~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~-~~~~~~~~~~--------------~~ 77 (171)
T d1p77a1 14 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG-NIQAVSMDSI--------------PL 77 (171)
T ss_dssp CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS-CEEEEEGGGC--------------CC
T ss_pred CCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhcc-ccchhhhccc--------------cc
Confidence 3678999999876 677999999999988899999999999998888886543 3444444311 12
Q ss_pred CCccEEEECCCCCC
Q 022386 88 GKLDILVNAAAGNF 101 (298)
Q Consensus 88 ~~id~li~~ag~~~ 101 (298)
...|++||+.....
T Consensus 78 ~~~diiIN~tp~g~ 91 (171)
T d1p77a1 78 QTYDLVINATSAGL 91 (171)
T ss_dssp SCCSEEEECCCC--
T ss_pred cccceeeecccccc
Confidence 57999999987543
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=97.63 E-value=0.0001 Score=58.74 Aligned_cols=81 Identities=19% Similarity=0.233 Sum_probs=57.6
Q ss_pred CCCCCCcEEEEecC----------------CchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccC
Q 022386 7 GDILKGKVALLTGG----------------GSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDV 70 (298)
Q Consensus 7 ~~~l~gk~~lVtG~----------------t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl 70 (298)
+.+|+|+.+|||+| ||..|.+||+.+..+|+.|.++.-.... .....+..+ .+
T Consensus 1 ~~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~---------~~p~~~~~~--~~ 69 (223)
T d1u7za_ 1 VNDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL---------PTPPFVKRV--DV 69 (223)
T ss_dssp CCTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC---------CCCTTEEEE--EC
T ss_pred CcccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc---------Ccccccccc--ee
Confidence 46899999999976 6889999999999999999887654321 111234444 33
Q ss_pred CCHHHHHHHHHHHHHHhCCccEEEECCCCCC
Q 022386 71 RKREDAVRVVESTINHFGKLDILVNAAAGNF 101 (298)
Q Consensus 71 s~~~~~~~~~~~~~~~~~~id~li~~ag~~~ 101 (298)
. +...+.+.+.+.+...|++|++|+...
T Consensus 70 ~---t~~~m~~~~~~~~~~~D~~i~aAAvsD 97 (223)
T d1u7za_ 70 M---TALEMEAAVNASVQQQNIFIGCAAVAD 97 (223)
T ss_dssp C---SHHHHHHHHHHHGGGCSEEEECCBCCS
T ss_pred h---hhHHHHHHHHhhhccceeEeeeechhh
Confidence 3 344455555556678999999998653
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.62 E-value=7.7e-05 Score=57.37 Aligned_cols=78 Identities=22% Similarity=0.280 Sum_probs=54.7
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
|.++||+||+|++|...+..+...|++|+++.++.++. +.+++.+.+.. .|..+++-.+.+. +.. ...++|
T Consensus 26 g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~----~~l~~~Ga~~v---i~~~~~~~~~~v~-~~t-~~~g~d 96 (183)
T d1pqwa_ 26 GERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKR----EMLSRLGVEYV---GDSRSVDFADEIL-ELT-DGYGVD 96 (183)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHH----HHHHTTCCSEE---EETTCSTHHHHHH-HHT-TTCCEE
T ss_pred CCEEEEECCCCCcccccchhhccccccceeeecccccc----ccccccccccc---ccCCccCHHHHHH-HHh-CCCCEE
Confidence 78999999999999999998888999999998876543 34555565532 2445543333322 221 123799
Q ss_pred EEEECCC
Q 022386 92 ILVNAAA 98 (298)
Q Consensus 92 ~li~~ag 98 (298)
+++.+.|
T Consensus 97 ~v~d~~g 103 (183)
T d1pqwa_ 97 VVLNSLA 103 (183)
T ss_dssp EEEECCC
T ss_pred EEEeccc
Confidence 9999987
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.59 E-value=0.0001 Score=53.65 Aligned_cols=73 Identities=18% Similarity=0.346 Sum_probs=57.8
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
+.++|.|+ |.+|+.+++.|.++|+.|++++.+.+..++..+.+ .+.++..|.++++.++++- ....|.
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~-----~~~vi~Gd~~~~~~l~~~~------i~~a~~ 68 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-----DALVINGDCTKIKTLEDAG------IEDADM 68 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----SSEEEESCTTSHHHHHHTT------TTTCSE
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh-----hhhhccCcccchhhhhhcC------hhhhhh
Confidence 36889997 99999999999999999999999987766654432 3667889999999777652 236787
Q ss_pred EEECC
Q 022386 93 LVNAA 97 (298)
Q Consensus 93 li~~a 97 (298)
++...
T Consensus 69 vv~~t 73 (132)
T d1lssa_ 69 YIAVT 73 (132)
T ss_dssp EEECC
T ss_pred hcccC
Confidence 77754
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.45 E-value=0.00013 Score=47.63 Aligned_cols=43 Identities=19% Similarity=0.254 Sum_probs=36.9
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHH
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSA 52 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~ 52 (298)
-++.+++|+||++|+|......+...|++|+.+.++.++.+-+
T Consensus 30 ~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~ 72 (77)
T d1o8ca2 30 PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL 72 (77)
T ss_dssp GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred cCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence 3578999999999999999998888999999999887765443
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=97.41 E-value=0.004 Score=45.64 Aligned_cols=117 Identities=14% Similarity=0.201 Sum_probs=71.8
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC--cEEEEcCChhHHHHHHHHHHhC---CCCeEEEEccCCCHHHHHHHHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL---GIPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
+.+.+.+.|.|+ |.+|..+|..|+.+|. +|++++++.+..+....++.+. .........|.
T Consensus 2 m~~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~------------- 67 (146)
T d1ez4a1 2 MPNHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY------------- 67 (146)
T ss_dssp BTTBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG-------------
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH-------------
Confidence 345678888995 9999999999999884 7999999987776666666542 23333444443
Q ss_pred HHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccc
Q 022386 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 157 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~ 157 (298)
+.....|++|..+|..... . ..-.+.+..|. .+++.+.+.+.+... .+.++++|..
T Consensus 68 -~~~~~adivvitag~~~~~---g---~~r~~l~~~N~----~i~~~~~~~i~~~~p-------~aivivvtNP 123 (146)
T d1ez4a1 68 -SDCKDADLVVITAGAPQKP---G---ESRLDLVNKNL----NILSSIVKPVVDSGF-------DGIFLVAANP 123 (146)
T ss_dssp -GGGTTCSEEEECCCC----------------CHHHHH----HHHHHHHHHHHHTTC-------CSEEEECSSS
T ss_pred -HHhccccEEEEecccccCC---C---CCHHHHHHHHH----HHHHHHHHHHhhcCC-------CcEEEEeCCc
Confidence 1224789999999853211 1 12233344444 455666666665542 4666666643
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=97.37 E-value=0.00038 Score=53.33 Aligned_cols=80 Identities=16% Similarity=0.268 Sum_probs=53.4
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh--
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-- 87 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-- 87 (298)
.|.+++|+|+ |++|...+..+...|+ +|++++++.++++.. ++.|.+.. + |.++. +.....+++.+..
T Consensus 28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a----~~lGa~~v-i--~~~~~-~~~~~~~~i~~~~~~ 98 (182)
T d1vj0a2 28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA----EEIGADLT-L--NRRET-SVEERRKAIMDITHG 98 (182)
T ss_dssp BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH----HHTTCSEE-E--ETTTS-CHHHHHHHHHHHTTT
T ss_pred CCCEEEEECC-Cccchhheeccccccccccccccccccccccc----ccccceEE-E--ecccc-chHHHHHHHHHhhCC
Confidence 5899999987 8999999999999998 799999987765432 33454432 2 33322 1222223333322
Q ss_pred CCccEEEECCCC
Q 022386 88 GKLDILVNAAAG 99 (298)
Q Consensus 88 ~~id~li~~ag~ 99 (298)
..+|++|.++|.
T Consensus 99 ~g~Dvvid~vG~ 110 (182)
T d1vj0a2 99 RGADFILEATGD 110 (182)
T ss_dssp SCEEEEEECSSC
T ss_pred CCceEEeecCCc
Confidence 369999999984
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=97.34 E-value=0.0002 Score=54.51 Aligned_cols=74 Identities=16% Similarity=0.242 Sum_probs=52.3
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|++++|+||+|++|...+......|++|+.+.++.++.+. +.+.|.+..+ |..+.. +++ ....++
T Consensus 27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~----~~~lGa~~~i---~~~~~~------~~~-~~~~g~ 92 (171)
T d1iz0a2 27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLAL----PLALGAEEAA---TYAEVP------ERA-KAWGGL 92 (171)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHH----HHHTTCSEEE---EGGGHH------HHH-HHTTSE
T ss_pred CCCEEEEEeccccchhhhhhhhccccccccccccccccccc----ccccccceee---ehhhhh------hhh-hccccc
Confidence 58999999999999999999888899999999888765443 3344554332 433321 222 233579
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|+++.+.|
T Consensus 93 D~v~d~~G 100 (171)
T d1iz0a2 93 DLVLEVRG 100 (171)
T ss_dssp EEEEECSC
T ss_pred cccccccc
Confidence 99999765
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.19 E-value=0.011 Score=43.22 Aligned_cols=120 Identities=13% Similarity=0.188 Sum_probs=75.8
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCC--cEEEEcCChhHHHHHHHHHHhC----CCCeEEEEccCCCHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVE 81 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~ 81 (298)
.+-.++.+.|+|+ |.+|..+|..|+.+|. ++++++++.+..+....++.+. ...+.....|.
T Consensus 2 ~~~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~----------- 69 (148)
T d1ldna1 2 KNNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY----------- 69 (148)
T ss_dssp TTTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG-----------
T ss_pred CCCCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH-----------
Confidence 4556788999997 9999999999999886 6999999988777776667653 22233333332
Q ss_pred HHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 82 STINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 82 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
+.+..-|++|..+|..... .+ +.. +.+..| .-+.+.+.+.+.+... .+.+++++....
T Consensus 70 ---~~l~daDvvvitag~~~~~--~~-~R~---dl~~~N----~~i~~~i~~~i~~~~p-------~a~~ivvtNPvd 127 (148)
T d1ldna1 70 ---DDCRDADLVVICAGANQKP--GE-TRL---DLVDKN----IAIFRSIVESVMASGF-------QGLFLVATNPVD 127 (148)
T ss_dssp ---GGTTTCSEEEECCSCCCCT--TT-CSG---GGHHHH----HHHHHHHHHHHHHHTC-------CSEEEECSSSHH
T ss_pred ---HHhccceeEEEeccccccc--Cc-chh---HHHHHH----HHHHHHHHHHHHhhCC-------CceEEEecCccH
Confidence 1234689999999853221 11 221 223333 4455556666555431 467777766443
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=97.18 E-value=0.00016 Score=52.50 Aligned_cols=73 Identities=11% Similarity=0.154 Sum_probs=54.5
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
|.++|.|+ |-+|+.+++.|.++|.+|++++.+.+..++. .+.+ ...+..|.++++.++++- ....|.
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~----~~~~--~~~~~gd~~~~~~l~~a~------i~~a~~ 67 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY----ASYA--THAVIANATEENELLSLG------IRNFEY 67 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHT----TTTC--SEEEECCTTCTTHHHHHT------GGGCSE
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHH----HHhC--CcceeeecccchhhhccC------CccccE
Confidence 56788866 7889999999999999999999998665543 3333 345668999988776651 136787
Q ss_pred EEECCC
Q 022386 93 LVNAAA 98 (298)
Q Consensus 93 li~~ag 98 (298)
+|...+
T Consensus 68 vi~~~~ 73 (134)
T d2hmva1 68 VIVAIG 73 (134)
T ss_dssp EEECCC
T ss_pred EEEEcC
Confidence 777664
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.18 E-value=0.00026 Score=54.13 Aligned_cols=107 Identities=15% Similarity=0.144 Sum_probs=68.6
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
-.|.++||+||+||+|...++.....|++|+.+.++.++.+.. .+.+.+... |-++. .......+ .-++
T Consensus 30 ~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~----~~lGa~~vi---~~~~~--~~~~~~~~--~~~g 98 (176)
T d1xa0a2 30 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL----RVLGAKEVL---AREDV--MAERIRPL--DKQR 98 (176)
T ss_dssp GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH----HHTTCSEEE---ECC-----------C--CSCC
T ss_pred CCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHH----Hhcccceee---ecchh--HHHHHHHh--hccC
Confidence 3488999999999999999998889999999999987765433 334544332 32221 12222211 2258
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCC
Q 022386 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 163 (298)
Q Consensus 90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~ 163 (298)
+|+++.+.|.. .. ...+..++. +|+++.++...+....
T Consensus 99 vD~vid~vgg~--------~~------------------~~~l~~l~~----------~Griv~~G~~~g~~~~ 136 (176)
T d1xa0a2 99 WAAAVDPVGGR--------TL------------------ATVLSRMRY----------GGAVAVSGLTGGAEVP 136 (176)
T ss_dssp EEEEEECSTTT--------TH------------------HHHHHTEEE----------EEEEEECSCCSSSCCC
T ss_pred cCEEEEcCCch--------hH------------------HHHHHHhCC----------CceEEEeecccCcccC
Confidence 99999999831 11 223344443 6899999887666544
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=97.17 E-value=0.00043 Score=52.36 Aligned_cols=79 Identities=15% Similarity=0.178 Sum_probs=53.8
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
.|.+++|+|+++++|..++..+...|+ .|++++++.++.+... +.|.+. .+ |.++++-.+...+... -+.
T Consensus 27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~----~~Ga~~-~i--~~~~~~~~~~~~~~~~--~~~ 97 (170)
T d1jvba2 27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK----RAGADY-VI--NASMQDPLAEIRRITE--SKG 97 (170)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH----HHTCSE-EE--ETTTSCHHHHHHHHTT--TSC
T ss_pred CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHH----HcCCce-ee--ccCCcCHHHHHHHHhh--ccc
Confidence 478999999999999999999999996 7888888876544332 334432 22 4444443444333221 146
Q ss_pred ccEEEECCC
Q 022386 90 LDILVNAAA 98 (298)
Q Consensus 90 id~li~~ag 98 (298)
+|++|.++|
T Consensus 98 ~d~vid~~g 106 (170)
T d1jvba2 98 VDAVIDLNN 106 (170)
T ss_dssp EEEEEESCC
T ss_pred chhhhcccc
Confidence 999999987
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.10 E-value=0.003 Score=47.54 Aligned_cols=79 Identities=22% Similarity=0.322 Sum_probs=54.8
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh-C
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-G 88 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~-~ 88 (298)
.|.+++|.|+ |++|...+..+...|+ +|++++++..+++.. ++.|.+.. +..+-.+..+..+.++. .+ .
T Consensus 26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a----~~~Ga~~~-~~~~~~~~~~~~~~~~~---~~g~ 96 (171)
T d1pl8a2 26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA----KEIGADLV-LQISKESPQEIARKVEG---QLGC 96 (171)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH----HHTTCSEE-EECSSCCHHHHHHHHHH---HHTS
T ss_pred CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHH----HHhCCccc-ccccccccccccccccc---cCCC
Confidence 4779999986 9999999999999999 699999997765533 33354432 33333444444444433 33 3
Q ss_pred CccEEEECCC
Q 022386 89 KLDILVNAAA 98 (298)
Q Consensus 89 ~id~li~~ag 98 (298)
.+|++|.++|
T Consensus 97 g~Dvvid~~G 106 (171)
T d1pl8a2 97 KPEVTIECTG 106 (171)
T ss_dssp CCSEEEECSC
T ss_pred CceEEEeccC
Confidence 7999999998
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=96.99 E-value=0.0013 Score=48.51 Aligned_cols=86 Identities=13% Similarity=0.089 Sum_probs=56.6
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
.+.+.+-|++.|.||.|-+|..+++.|.++|++|.+.+++.....+.. ....++.....+ ...+...+.++..
T Consensus 3 ~~~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~----~~~~~~v~~~~~---~~~~~~v~~~~~~ 75 (152)
T d2pv7a2 3 KTINSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESI----LANADVVIVSVP---INLTLETIERLKP 75 (152)
T ss_dssp CCSCTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHH----HTTCSEEEECSC---GGGHHHHHHHHGG
T ss_pred cccCCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchh----hhhccccccccc---hhhheeeeecccc
Confidence 445666689999999999999999999999999999999865433221 123344444333 3345555565554
Q ss_pred HhCCccEEEECCC
Q 022386 86 HFGKLDILVNAAA 98 (298)
Q Consensus 86 ~~~~id~li~~ag 98 (298)
...+=.+++..+.
T Consensus 76 ~~~~~~iiiD~~S 88 (152)
T d2pv7a2 76 YLTENMLLADLTS 88 (152)
T ss_dssp GCCTTSEEEECCS
T ss_pred cccCCceEEEecc
Confidence 4333344555554
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=96.94 E-value=0.00046 Score=46.69 Aligned_cols=39 Identities=21% Similarity=0.188 Sum_probs=34.6
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~ 47 (298)
.+++||+++|.|. |..|+++|+.|.++|++|.+.+.+..
T Consensus 1 ~~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~ 39 (93)
T d2jfga1 1 ADYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT 39 (93)
T ss_dssp CCCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred CCcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence 4789999999988 56799999999999999999998643
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=96.91 E-value=0.00063 Score=51.75 Aligned_cols=79 Identities=19% Similarity=0.173 Sum_probs=51.9
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
.|.+++|.|+ |++|...+..+...|+ +|++++++..+++... +.|... + +|..+++-.+++.+ +.+ ...
T Consensus 27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~----~lGa~~-~--i~~~~~~~~~~v~~-~t~-g~G 96 (174)
T d1jqba2 27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK----FYGATD-I--LNYKNGHIEDQVMK-LTN-GKG 96 (174)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH----HHTCSE-E--ECGGGSCHHHHHHH-HTT-TSC
T ss_pred CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHH----hhCccc-c--ccccchhHHHHHHH-Hhh-ccC
Confidence 4789999976 8999999999988998 6889999876644432 234322 2 24444332332222 221 135
Q ss_pred ccEEEECCCC
Q 022386 90 LDILVNAAAG 99 (298)
Q Consensus 90 id~li~~ag~ 99 (298)
+|++|.++|.
T Consensus 97 ~D~vid~~g~ 106 (174)
T d1jqba2 97 VDRVIMAGGG 106 (174)
T ss_dssp EEEEEECSSC
T ss_pred cceEEEccCC
Confidence 9999999983
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=96.91 E-value=0.001 Score=50.57 Aligned_cols=79 Identities=15% Similarity=0.209 Sum_probs=53.4
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHH-HHHHHHHHHHHh
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRED-AVRVVESTINHF 87 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~-~~~~~~~~~~~~ 87 (298)
-.|.+++|+|+ ||+|...+..+...|+ +|++++.+.++++-..+ + |.+..+ |.++.+. .+...+.. ..
T Consensus 28 ~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~-~---GA~~~i---n~~~~~~~~~~~~~~~--~g 97 (176)
T d1d1ta2 28 KPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA-V---GATECI---SPKDSTKPISEVLSEM--TG 97 (176)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-H---TCSEEE---CGGGCSSCHHHHHHHH--HT
T ss_pred CCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHh-c---CCcEEE---CccccchHHHHHHHHh--cc
Confidence 34889999986 8999999999999996 79999999887664333 2 443333 3232222 22222222 22
Q ss_pred CCccEEEECCC
Q 022386 88 GKLDILVNAAA 98 (298)
Q Consensus 88 ~~id~li~~ag 98 (298)
..+|++|.+.|
T Consensus 98 ~G~d~vi~~~g 108 (176)
T d1d1ta2 98 NNVGYTFEVIG 108 (176)
T ss_dssp SCCCEEEECSC
T ss_pred ccceEEEEeCC
Confidence 48999999998
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=96.88 E-value=0.0052 Score=45.43 Aligned_cols=105 Identities=14% Similarity=0.206 Sum_probs=60.6
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCC-------cEEE--EcCChhHHHHHHHHHHhCCC-CeEEEEccCCCHHHHHHHHHH
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGA-------AIAI--MGRRKTVLRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVES 82 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~-------~Vv~--~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dls~~~~~~~~~~~ 82 (298)
..+.|+||+|.+|..++..|+..+. ...+ ...+.+.++....++.+... ....+...-.+.
T Consensus 5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 75 (154)
T d1y7ta1 5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPK--------- 75 (154)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHH---------
T ss_pred CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchh---------
Confidence 3899999999999999999998653 1222 33444455555555544322 233332221111
Q ss_pred HHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q 022386 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKG 138 (298)
Q Consensus 83 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 138 (298)
+.+...|++|..+|.... ...+..++ +..| ..+++.+.+.+.+.
T Consensus 76 --~~~~~advViitaG~~~~---pg~~r~dl---~~~N----~~i~~~~~~~i~k~ 119 (154)
T d1y7ta1 76 --VAFKDADYALLVGAAPRK---AGMERRDL---LQVN----GKIFTEQGRALAEV 119 (154)
T ss_dssp --HHTTTCSEEEECCCCCCC---TTCCHHHH---HHHH----HHHHHHHHHHHHHH
T ss_pred --hhcccccEEEeecCcCCC---CCCcHHHH---HHHH----HHHHHHHHHHHHHh
Confidence 123479999999996432 23355444 3334 44556666666553
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=96.88 E-value=0.0014 Score=49.31 Aligned_cols=74 Identities=22% Similarity=0.301 Sum_probs=52.7
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|.+++|.|+ |++|...+..+...|+++++++++.++.+ ..++ .+.+.. +|..+.+.... ....+
T Consensus 30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~-~a~~---lGad~~---i~~~~~~~~~~-------~~~~~ 94 (168)
T d1uufa2 30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKRE-AAKA---LGADEV---VNSRNADEMAA-------HLKSF 94 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHH---HTCSEE---EETTCHHHHHT-------TTTCE
T ss_pred CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHH-HHhc---cCCcEE---EECchhhHHHH-------hcCCC
Confidence 4889999986 89999999888889999999998887653 2333 344332 35665543322 22589
Q ss_pred cEEEECCCC
Q 022386 91 DILVNAAAG 99 (298)
Q Consensus 91 d~li~~ag~ 99 (298)
|++|.+.|.
T Consensus 95 D~vid~~g~ 103 (168)
T d1uufa2 95 DFILNTVAA 103 (168)
T ss_dssp EEEEECCSS
T ss_pred ceeeeeeec
Confidence 999999983
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.86 E-value=0.0013 Score=50.52 Aligned_cols=78 Identities=10% Similarity=0.144 Sum_probs=51.3
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEE-EcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
+++|||+||+||+|...++.....|+.+++ +.++.++...+..++ +.+.. .|..+++ +.+.++++.. ..+
T Consensus 31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~---gad~v---i~~~~~~-~~~~~~~~~~--~Gv 101 (187)
T d1vj1a2 31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL---GFDAA---VNYKTGN-VAEQLREACP--GGV 101 (187)
T ss_dssp CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS---CCSEE---EETTSSC-HHHHHHHHCT--TCE
T ss_pred CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc---cceEE---eeccchh-HHHHHHHHhc--cCc
Confidence 489999999999999999988889997555 556655444443333 33322 2555443 3333343332 479
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
|+++.+.|
T Consensus 102 Dvv~D~vG 109 (187)
T d1vj1a2 102 DVYFDNVG 109 (187)
T ss_dssp EEEEESSC
T ss_pred eEEEecCC
Confidence 99999997
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=96.82 E-value=0.0061 Score=46.03 Aligned_cols=85 Identities=15% Similarity=0.164 Sum_probs=61.5
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHH---------------HHhCCCCeEEEEccCCCHHHHH
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAA---------------LHSLGIPAIGLEGDVRKREDAV 77 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~---------------~~~~~~~~~~~~~Dls~~~~~~ 77 (298)
+.+-|.|. |-+|..+|++|+++|++|++.+|+.++.+++.+. +.+.-.+...+...+.+.+.+.
T Consensus 3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~ 81 (176)
T d2pgda2 3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVD 81 (176)
T ss_dssp BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHH
T ss_pred CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHHH
Confidence 45666765 8899999999999999999999999887776543 1111122344445667777888
Q ss_pred HHHHHHHHHhCCccEEEECCC
Q 022386 78 RVVESTINHFGKLDILVNAAA 98 (298)
Q Consensus 78 ~~~~~~~~~~~~id~li~~ag 98 (298)
...+.+.....+=+++|.+..
T Consensus 82 ~v~~~l~~~~~~g~iiid~sT 102 (176)
T d2pgda2 82 NFIEKLVPLLDIGDIIIDGGN 102 (176)
T ss_dssp HHHHHHHHHCCTTCEEEECSC
T ss_pred HHHHHHHhccccCcEEEecCc
Confidence 888888776666677777764
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=96.79 E-value=0.014 Score=42.50 Aligned_cols=118 Identities=13% Similarity=0.162 Sum_probs=71.9
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCC--cEEEEcCChhHHHHHHHHHHhC----CCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
|.+.|+|+ |.+|..+|..|+.+|. ++++++.+.++++....++.+. ..+......|. +.
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~--------------~~ 66 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW--------------AA 66 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG--------------GG
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCH--------------HH
Confidence 67788895 8999999999999885 6999999988777666666542 22233332232 12
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~ 158 (298)
...-|++|..||..... .+.+..+-.+.++.| .-+++.+.+.+.+... .+.+++++...
T Consensus 67 l~~adiVVitaG~~~~~--~~~~g~~R~~l~~~N----~~i~~~i~~~i~~~~p-------~aivivvtNPv 125 (146)
T d1hyha1 67 LADADVVISTLGNIKLQ--QDNPTGDRFAELKFT----SSMVQSVGTNLKESGF-------HGVLVVISNPV 125 (146)
T ss_dssp GTTCSEEEECCSCGGGT--C-------CTTHHHH----HHHHHHHHHHHHHTTC-------CSEEEECSSSH
T ss_pred hccccEEEEeccccccc--cccCCccHHHHHHHH----HHHHHHHHHHHhhcCC-------CeEEEEecCcH
Confidence 24789999999853211 011111112223334 4566777777776542 46677777644
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=96.79 E-value=0.002 Score=48.81 Aligned_cols=78 Identities=15% Similarity=0.262 Sum_probs=50.6
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEE-EEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIA-IMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv-~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
-.|.+++|.|+ |++|...+..+...|+.++ +++++..+++.. +++ |.. .++ |..+++ +.+.+.++.. +
T Consensus 27 ~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a-~~~---Ga~-~~i--~~~~~~-~~~~i~~~t~--g 95 (174)
T d1f8fa2 27 TPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQL---GAT-HVI--NSKTQD-PVAAIKEITD--G 95 (174)
T ss_dssp CTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHH---TCS-EEE--ETTTSC-HHHHHHHHTT--S
T ss_pred CCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHH-HHc---CCe-EEE--eCCCcC-HHHHHHHHcC--C
Confidence 34889999987 8999999998888999765 456665544433 333 432 233 445433 3333333322 5
Q ss_pred CccEEEECCC
Q 022386 89 KLDILVNAAA 98 (298)
Q Consensus 89 ~id~li~~ag 98 (298)
.+|++|.+.|
T Consensus 96 g~D~vid~~G 105 (174)
T d1f8fa2 96 GVNFALESTG 105 (174)
T ss_dssp CEEEEEECSC
T ss_pred CCcEEEEcCC
Confidence 8999999998
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=96.77 E-value=0.0025 Score=44.56 Aligned_cols=40 Identities=20% Similarity=0.219 Sum_probs=34.9
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~ 47 (298)
..+|+||+++|.|++. +|..-++.|++.|+.|++++....
T Consensus 7 ~l~l~~k~vlVvG~G~-va~~ka~~ll~~ga~v~v~~~~~~ 46 (113)
T d1pjqa1 7 FCQLRDRDCLIVGGGD-VAERKARLLLEAGARLTVNALTFI 46 (113)
T ss_dssp EECCBTCEEEEECCSH-HHHHHHHHHHHTTBEEEEEESSCC
T ss_pred EEEeCCCEEEEECCCH-HHHHHHHHHHHCCCeEEEEeccCC
Confidence 4589999999999865 899999999999999999877643
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=96.77 E-value=0.00071 Score=51.10 Aligned_cols=75 Identities=21% Similarity=0.259 Sum_probs=50.7
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHH--hC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH--FG 88 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~--~~ 88 (298)
.+.++||+||+||+|...++.....|++|+.+.++.++.+.+ .+.+.+... | .++ ...+.... -+
T Consensus 23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~----~~lGad~vi---~---~~~---~~~~~~~~~~~~ 89 (167)
T d1tt7a2 23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL----KQLGASEVI---S---RED---VYDGTLKALSKQ 89 (167)
T ss_dssp GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH----HHHTCSEEE---E---HHH---HCSSCCCSSCCC
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHH----HhhcccceE---e---ccc---hhchhhhcccCC
Confidence 466899999999999999988888899999999987765543 333444322 1 111 11111111 14
Q ss_pred CccEEEECCC
Q 022386 89 KLDILVNAAA 98 (298)
Q Consensus 89 ~id~li~~ag 98 (298)
++|+++.+.|
T Consensus 90 gvd~vid~vg 99 (167)
T d1tt7a2 90 QWQGAVDPVG 99 (167)
T ss_dssp CEEEEEESCC
T ss_pred CceEEEecCc
Confidence 7999999987
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=96.75 E-value=0.0041 Score=45.82 Aligned_cols=76 Identities=12% Similarity=0.104 Sum_probs=58.9
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l 93 (298)
.++|.|. +.+|+.+++.|.++|.+|+++..+.+...+..+.... ..+.++..|.++++.++++- ..+.+.+
T Consensus 5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~--~~~~vi~Gd~~d~~~L~~a~------i~~a~~v 75 (153)
T d1id1a_ 5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG--DNADVIPGDSNDSSVLKKAG------IDRCRAI 75 (153)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC--TTCEEEESCTTSHHHHHHHT------TTTCSEE
T ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhc--CCcEEEEccCcchHHHHHhc------cccCCEE
Confidence 4777777 6899999999999999999999988765555555543 34778899999998777652 2367888
Q ss_pred EECCC
Q 022386 94 VNAAA 98 (298)
Q Consensus 94 i~~ag 98 (298)
|....
T Consensus 76 i~~~~ 80 (153)
T d1id1a_ 76 LALSD 80 (153)
T ss_dssp EECSS
T ss_pred EEccc
Confidence 87764
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=96.73 E-value=0.047 Score=40.27 Aligned_cols=121 Identities=14% Similarity=0.131 Sum_probs=77.6
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCC--cEEEEcCChhHHHHHHHHHHhC----CCCeEEEEccCCCHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVV 80 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~ 80 (298)
...+..+.+.|.|+ |.+|..++..|+.+|. ++++++.+.+..+....++.+. +........|..+
T Consensus 15 ~~~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~~-------- 85 (160)
T d1i0za1 15 EATVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSV-------- 85 (160)
T ss_dssp CCCCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGGG--------
T ss_pred cccCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchhh--------
Confidence 33455678888896 9999999999999987 6999999988777777777653 1122222222221
Q ss_pred HHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 81 ESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 81 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
...-|++|..||.... + ..+.. +.++.| ..+++.+.+.+.+... .+.++++|....
T Consensus 86 ------~~~adiVVitAg~~~~-~--g~tR~---~l~~~N----~~i~~~i~~~i~~~~p-------~aiiivvtNPvD 141 (160)
T d1i0za1 86 ------TANSKIVVVTAGVRQQ-E--GESRL---NLVQRN----VNVFKFIIPQIVKYSP-------DCIIIVVSNPVD 141 (160)
T ss_dssp ------GTTCSEEEECCSCCCC-T--TCCGG---GGHHHH----HHHHHHHHHHHHHHCT-------TCEEEECSSSHH
T ss_pred ------cccccEEEEecCCccc-c--CcchH---HHHHHH----HHHHHHHHHHHHhcCC-------CcEEEEeCCchH
Confidence 2478999999996432 1 22322 233334 4466777777766542 467777776543
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=96.73 E-value=0.0012 Score=50.38 Aligned_cols=42 Identities=19% Similarity=0.279 Sum_probs=36.2
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHH
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSA 52 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~ 52 (298)
.+.++||+||+||+|...++.....|++|+.+.++.++.+.+
T Consensus 31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~ 72 (177)
T d1o89a2 31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL 72 (177)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH
Confidence 345899999999999999998889999999999988775433
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.70 E-value=0.0061 Score=45.62 Aligned_cols=75 Identities=23% Similarity=0.210 Sum_probs=50.9
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|.+++|.|+ |++|...+..+...|++|++++++.++++.. ++.|.+..+..-+-.+ . .+ ...+.+
T Consensus 27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a----~~lGa~~~i~~~~~~~---~---~~---~~~~~~ 92 (168)
T d1piwa2 27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA----MKMGADHYIATLEEGD---W---GE---KYFDTF 92 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH----HHHTCSEEEEGGGTSC---H---HH---HSCSCE
T ss_pred CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHh----hccCCcEEeeccchHH---H---HH---hhhccc
Confidence 5889999987 8999999888878999999999987766543 2335443332222221 1 11 223579
Q ss_pred cEEEECCCC
Q 022386 91 DILVNAAAG 99 (298)
Q Consensus 91 d~li~~ag~ 99 (298)
|+++.+.+.
T Consensus 93 d~vi~~~~~ 101 (168)
T d1piwa2 93 DLIVVCASS 101 (168)
T ss_dssp EEEEECCSC
T ss_pred ceEEEEecC
Confidence 999998874
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=96.70 E-value=0.002 Score=48.76 Aligned_cols=80 Identities=18% Similarity=0.229 Sum_probs=53.0
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
.|.+++|.|+ +|+|...+..+...|+ +|++++++.++.+.. .+.+........|- ++.+....+... .+.
T Consensus 28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a----~~~Ga~~~i~~~~~--~~~~~~~~~~~~--~~G 98 (176)
T d2jhfa2 28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA----KEVGATECVNPQDY--KKPIQEVLTEMS--NGG 98 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH----HHTTCSEEECGGGC--SSCHHHHHHHHT--TSC
T ss_pred CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHH----HHhCCeeEEecCCc--hhHHHHHHHHHh--cCC
Confidence 4789999999 6899999999999986 788888888765533 23343332221222 223444444332 258
Q ss_pred ccEEEECCCC
Q 022386 90 LDILVNAAAG 99 (298)
Q Consensus 90 id~li~~ag~ 99 (298)
+|++|.+.|.
T Consensus 99 ~D~vid~~G~ 108 (176)
T d2jhfa2 99 VDFSFEVIGR 108 (176)
T ss_dssp BSEEEECSCC
T ss_pred CCEEEecCCc
Confidence 9999999983
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.67 E-value=0.024 Score=41.86 Aligned_cols=120 Identities=13% Similarity=0.173 Sum_probs=75.2
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCC--cEEEEcCChhHHHHHHHHHHhCC----CCeEEEEccCCCHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLG----IPAIGLEGDVRKREDAVRVV 80 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dls~~~~~~~~~ 80 (298)
...++...+.|+|+ |.+|..+|..|+.+|. ++++++++.+......-++.+.. ........|..
T Consensus 14 ~~~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~--------- 83 (159)
T d2ldxa1 14 EDKLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYN--------- 83 (159)
T ss_dssp CCCCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGG---------
T ss_pred cccCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchh---------
Confidence 34455567888886 9999999999999876 69999999887777777776532 12222222321
Q ss_pred HHHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccc
Q 022386 81 ESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (298)
Q Consensus 81 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~ 158 (298)
....-|++|..||...... .+..+ .++ ....+.+.+.+.+.+... .+.+++++...
T Consensus 84 -----~~~~adivvitag~~~~~~---~~R~d---ll~----~N~~i~~~i~~~i~~~~p-------~~ivivvtNPv 139 (159)
T d2ldxa1 84 -----VSANSKLVIITAGARMVSG---QTRLD---LLQ----RNVAIMKAIVPGVIQNSP-------DCKIIVVTNPV 139 (159)
T ss_dssp -----GGTTEEEEEECCSCCCCTT---TCSSC---TTH----HHHHHHHHHTTTHHHHST-------TCEEEECSSSH
T ss_pred -----hhccccEEEEecccccCCC---CCHHH---HHH----HHHHHHHHHHHHHhccCC-------CeEEEEeCCcH
Confidence 2247899999998543221 12211 122 334456666666665532 57777777643
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=96.61 E-value=0.068 Score=38.51 Aligned_cols=114 Identities=10% Similarity=0.054 Sum_probs=71.5
Q ss_pred EEEEecCCchhHHHHHHHHHHcCC--cEEEEcCC--hhHHHHHHHHHHh---CCCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRR--KTVLRSAVAALHS---LGIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~--~~~~~~~~~~~~~---~~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.+.|+|++|.+|.++|..++.+|. ++++++.+ .+..+...-++.+ ..........|.. .
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~--------------~ 67 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYE--------------D 67 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGG--------------G
T ss_pred eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHH--------------H
Confidence 578999999999999999999987 58888864 3334444445543 2333433333321 1
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~ 158 (298)
...-|++|..||... ++ ..+..+ .++.| .-+++.+.+.+.+... .+.++.++...
T Consensus 68 ~~~aDiVvitaG~~~-~~--g~~R~d---l~~~N----~~I~~~i~~~i~~~~p-------~~i~ivvtNPv 122 (142)
T d1o6za1 68 TAGSDVVVITAGIPR-QP--GQTRID---LAGDN----APIMEDIQSSLDEHND-------DYISLTTSNPV 122 (142)
T ss_dssp GTTCSEEEECCCCCC-CT--TCCHHH---HHHHH----HHHHHHHHHHHHTTCS-------CCEEEECCSSH
T ss_pred hhhcCEEEEeccccc-cc--CCchhh---HHHHH----HHHHHHHHHHHHhcCC-------CceEEEecChH
Confidence 247899999998532 22 234433 34444 4567777777776542 46677776543
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.59 E-value=0.0037 Score=46.68 Aligned_cols=76 Identities=16% Similarity=0.233 Sum_probs=50.8
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|.+++|.|+ |++|...+..+...|++|++++++.++++. .++.|.+.. + |.++.+..+.+.+ ..+..
T Consensus 27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~----a~~~Ga~~~-i--~~~~~~~~~~~~~----~~~g~ 94 (166)
T d1llua2 27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLEL----ARKLGASLT-V--NARQEDPVEAIQR----DIGGA 94 (166)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH----HHHTTCSEE-E--ETTTSCHHHHHHH----HHSSE
T ss_pred CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHh----hhccCcccc-c--cccchhHHHHHHH----hhcCC
Confidence 4789999886 999999998888899999999999776543 334454332 2 4554444443322 33456
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
+..|.+++
T Consensus 95 ~~~i~~~~ 102 (166)
T d1llua2 95 HGVLVTAV 102 (166)
T ss_dssp EEEEECCS
T ss_pred cccccccc
Confidence 66666665
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=96.56 E-value=0.0018 Score=49.07 Aligned_cols=80 Identities=24% Similarity=0.354 Sum_probs=53.2
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHH-HHHHHHHHHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRE-DAVRVVESTINH 86 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~-~~~~~~~~~~~~ 86 (298)
.-.|.+++|.|+ ||+|...+..+...|+ +|++++++.++++... +.|.+.. + |.++.+ .+.+..... .
T Consensus 25 ~~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~----~lGa~~~-i--~~~~~d~~~~~~~~~~--~ 94 (174)
T d1p0fa2 25 VTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI----ELGATEC-L--NPKDYDKPIYEVICEK--T 94 (174)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH----HTTCSEE-E--CGGGCSSCHHHHHHHH--T
T ss_pred CCCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHH----HcCCcEE-E--cCCCchhHHHHHHHHh--c
Confidence 345889999986 8999999999999998 6888889887765442 3344332 2 333222 123332222 1
Q ss_pred hCCccEEEECCC
Q 022386 87 FGKLDILVNAAA 98 (298)
Q Consensus 87 ~~~id~li~~ag 98 (298)
-+.+|++|.++|
T Consensus 95 ~~G~d~vid~~g 106 (174)
T d1p0fa2 95 NGGVDYAVECAG 106 (174)
T ss_dssp TSCBSEEEECSC
T ss_pred CCCCcEEEEcCC
Confidence 258999999987
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=96.52 E-value=0.0048 Score=46.62 Aligned_cols=78 Identities=18% Similarity=0.261 Sum_probs=51.2
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCc-EEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCC-HHHHHHHHHHHHHHhC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK-REDAVRVVESTINHFG 88 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~-~~~~~~~~~~~~~~~~ 88 (298)
.|.+++|.|+ |++|...+..+...|+. |++++.+.++++- + ++.|.... + |..+ ++..+...+... .+
T Consensus 28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~-a---~~~Ga~~~-i--~~~~~~~~~~~~~~~~~--~~ 97 (174)
T d1e3ia2 28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPK-A---KALGATDC-L--NPRELDKPVQDVITELT--AG 97 (174)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHH-H---HHTTCSEE-E--CGGGCSSCHHHHHHHHH--TS
T ss_pred CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHH-H---HHhCCCcc-c--CCccchhhhhhhHhhhh--cC
Confidence 4789999975 99999999999999995 7778888765432 2 23344332 2 2221 122333333332 35
Q ss_pred CccEEEECCC
Q 022386 89 KLDILVNAAA 98 (298)
Q Consensus 89 ~id~li~~ag 98 (298)
.+|++|.++|
T Consensus 98 G~d~vie~~G 107 (174)
T d1e3ia2 98 GVDYSLDCAG 107 (174)
T ss_dssp CBSEEEESSC
T ss_pred CCcEEEEecc
Confidence 8999999998
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.48 E-value=0.086 Score=38.10 Aligned_cols=102 Identities=13% Similarity=0.139 Sum_probs=62.3
Q ss_pred EEEEecCCchhHHHHHHHHHHcCC--cEEEEcCChh--HHHHHHHHHHhC----CCCeE--EEEccCCCHHHHHHHHHHH
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKT--VLRSAVAALHSL----GIPAI--GLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~--~~~~~~~~~~~~----~~~~~--~~~~Dls~~~~~~~~~~~~ 83 (298)
.+.|+||+|.+|..+|..|+.+|. ++++++++.+ +.+....++.+. ...+. ....+ +.
T Consensus 2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~--d~---------- 69 (145)
T d1hyea1 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDE--NL---------- 69 (145)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETT--CG----------
T ss_pred EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcc--hH----------
Confidence 588999999999999999999985 7999998753 344444455441 22222 22221 11
Q ss_pred HHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q 022386 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKG 138 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 138 (298)
+.+..-|++|.+||.... ...+..+ .++.|.. +++.+.+.+.+.
T Consensus 70 -~~l~~aDvVVitAG~~~~---~g~sR~d---l~~~Na~----iv~~i~~~i~~~ 113 (145)
T d1hyea1 70 -RIIDESDVVIITSGVPRK---EGMSRMD---LAKTNAK----IVGKYAKKIAEI 113 (145)
T ss_dssp -GGGTTCSEEEECCSCCCC---TTCCHHH---HHHHHHH----HHHHHHHHHHHH
T ss_pred -HHhccceEEEEecccccC---CCCChhh---hhhhhHH----HHHHHHHHHhcc
Confidence 123478999999995321 1234433 4455554 455555555544
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.36 E-value=0.0069 Score=44.19 Aligned_cols=118 Identities=17% Similarity=0.177 Sum_probs=68.2
Q ss_pred EEEEecCCchhHHHHHHHHHHcCC--cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
.+.|+||+|.+|.++|..|+.+|. ++++++.+..+. ...++.+..... ....-+ ...+....+ ..-|
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~--~a~Dl~~~~~~~-~~~~~~-~~~~~~~~~-------~~aD 70 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPG--VAADLSHIETRA-TVKGYL-GPEQLPDCL-------KGCD 70 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHH--HHHHHTTSSSSC-EEEEEE-SGGGHHHHH-------TTCS
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccch--hhHHHhhhhhhc-CCCeEE-cCCChHHHh-------CCCC
Confidence 578999999999999999999887 599999876432 233454332111 111111 122222222 3799
Q ss_pred EEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 92 ILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 92 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
++|..+|... ++ ..+..+ .++.|..-. +.+.+.+.+... .+.++.++....
T Consensus 71 ivVitag~~~-~~--g~sR~~---ll~~N~~i~----~~i~~~i~~~~p-------~~iiivvtNPvD 121 (144)
T d1mlda1 71 VVVIPAGVPR-KP--GMTRDD---LFNTNATIV----ATLTAACAQHCP-------DAMICIISNPVN 121 (144)
T ss_dssp EEEECCSCCC-CT--TCCGGG---GHHHHHHHH----HHHHHHHHHHCT-------TSEEEECSSCHH
T ss_pred EEEECCCcCC-CC--CCCcch---HHHHHHHHH----HHHHHHHHhcCC-------CeEEEEecCchh
Confidence 9999999532 22 223322 355555544 455555554431 466777776543
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=96.28 E-value=0.0051 Score=47.63 Aligned_cols=43 Identities=16% Similarity=0.252 Sum_probs=37.7
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRS 51 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~ 51 (298)
.+|+||+++|.| .|.+|..+|+.|.+.|++|++++.+......
T Consensus 23 ~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~ 65 (201)
T d1c1da1 23 GSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAH 65 (201)
T ss_dssp CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHH
Confidence 479999999997 7779999999999999999999988765543
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=96.27 E-value=0.063 Score=40.19 Aligned_cols=106 Identities=14% Similarity=0.118 Sum_probs=61.8
Q ss_pred CcEEEEecCCchhHHHHHHHHHHc---CC----cEEEEcCCh--hHHHHHHHHHHhCCCC-eEEEEccCCCHHHHHHHHH
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKH---GA----AIAIMGRRK--TVLRSAVAALHSLGIP-AIGLEGDVRKREDAVRVVE 81 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~---G~----~Vv~~~r~~--~~~~~~~~~~~~~~~~-~~~~~~Dls~~~~~~~~~~ 81 (298)
...+.||||+|.||..++-.|++. |. .+.+++.+. +.++...-++.+.... ...+.. -++..
T Consensus 24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~-~~~~~------- 95 (175)
T d7mdha1 24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSI-GIDPY------- 95 (175)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE-ESCHH-------
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccc-cccch-------
Confidence 447999999999999999999874 32 355566554 3344444455544222 222211 12211
Q ss_pred HHHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q 022386 82 STINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKG 138 (298)
Q Consensus 82 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 138 (298)
+.+...|++|..+|.... ...+.++ .++.| ..+.+.+.+.+.+.
T Consensus 96 ---~~~~~aDvVvi~ag~~rk---pg~tR~D---ll~~N----~~I~k~~~~~i~~~ 139 (175)
T d7mdha1 96 ---EVFEDVDWALLIGAKPRG---PGMERAA---LLDIN----GQIFADQGKALNAV 139 (175)
T ss_dssp ---HHTTTCSEEEECCCCCCC---TTCCHHH---HHHHH----HHHHHHHHHHHHHH
T ss_pred ---hhccCCceEEEeeccCCC---CCCcHHH---HHHHH----HHHHHHHHHHHHhh
Confidence 233589999999986321 1345544 34445 44556666666654
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=96.26 E-value=0.0043 Score=46.57 Aligned_cols=45 Identities=16% Similarity=0.232 Sum_probs=38.9
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHH
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAAL 56 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~ 56 (298)
++|.++|.|+ ||.+++++..|.+.|+ +|.++.|+.++.+.+.+.+
T Consensus 16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~ 61 (167)
T d1npya1 16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY 61 (167)
T ss_dssp TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence 5788999987 8899999999999998 7999999988877776655
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.21 E-value=0.0046 Score=46.81 Aligned_cols=49 Identities=18% Similarity=0.283 Sum_probs=42.2
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS 58 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~ 58 (298)
.+++||.++|.|+ ||.+++++..|.+.| +|.++.|+.++.+++.+.+..
T Consensus 14 ~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~ 62 (177)
T d1nvta1 14 GRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAE 62 (177)
T ss_dssp CCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHH
T ss_pred CCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHH
Confidence 3689999999976 678999999998777 899999999998888887754
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.19 E-value=0.0057 Score=46.98 Aligned_cols=44 Identities=16% Similarity=0.326 Sum_probs=37.8
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHH
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH 57 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~ 57 (298)
|.+.|.|+ |-+|..+|..|+.+|++|++++++.+.++...+.+.
T Consensus 5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~ 48 (192)
T d1f0ya2 5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIE 48 (192)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHH
T ss_pred EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHH
Confidence 68888888 779999999999999999999999887776655543
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=96.16 E-value=0.0046 Score=46.49 Aligned_cols=77 Identities=17% Similarity=0.236 Sum_probs=49.9
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
.|.+++|.|+ |++|...+..+...|+ .|++++++.++++. +++.+.+. ++ |.++ +.++...+... ...
T Consensus 32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~----~~~~ga~~-~i--~~~~-~~~~~~~~~~~--~~g 100 (172)
T d1h2ba2 32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKL----AERLGADH-VV--DARR-DPVKQVMELTR--GRG 100 (172)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHH----HHHTTCSE-EE--ETTS-CHHHHHHHHTT--TCC
T ss_pred CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHH----Hhhcccce-ee--cCcc-cHHHHHHHhhC--CCC
Confidence 4789999886 9999999998888897 56667777655443 33344432 23 3332 33444443221 236
Q ss_pred ccEEEECCC
Q 022386 90 LDILVNAAA 98 (298)
Q Consensus 90 id~li~~ag 98 (298)
+|++|.++|
T Consensus 101 ~d~vid~~g 109 (172)
T d1h2ba2 101 VNVAMDFVG 109 (172)
T ss_dssp EEEEEESSC
T ss_pred ceEEEEecC
Confidence 999999998
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=96.15 E-value=0.0058 Score=45.96 Aligned_cols=79 Identities=16% Similarity=0.224 Sum_probs=50.7
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCc-EEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCC-HHHHHHHHHHHHHHh
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAA-IAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRK-REDAVRVVESTINHF 87 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~-~~~~~~~~~~~~~~~ 87 (298)
-.|.+++|.|+ +|+|...+..+...|+. |++++++.++++ ..+++ |.+.. + |..+ .+.+.+.++... .
T Consensus 27 ~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~-~ak~l---Ga~~~-i--~~~~~~~~~~~~~~~~~--~ 96 (176)
T d2fzwa2 27 EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFA-RAKEF---GATEC-I--NPQDFSKPIQEVLIEMT--D 96 (176)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHH-HHHHH---TCSEE-E--CGGGCSSCHHHHHHHHT--T
T ss_pred CCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHH-HHHHh---CCcEE-E--eCCchhhHHHHHHHHHc--C
Confidence 34889999998 58999999999999985 556666665543 33333 43332 2 2322 233444444332 2
Q ss_pred CCccEEEECCC
Q 022386 88 GKLDILVNAAA 98 (298)
Q Consensus 88 ~~id~li~~ag 98 (298)
+.+|++|.+.|
T Consensus 97 ~g~D~vid~~G 107 (176)
T d2fzwa2 97 GGVDYSFECIG 107 (176)
T ss_dssp SCBSEEEECSC
T ss_pred CCCcEeeecCC
Confidence 57999999998
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=96.14 E-value=0.025 Score=41.79 Aligned_cols=81 Identities=19% Similarity=0.137 Sum_probs=54.4
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHH---------h-CCCCeEEEEccCCCHHHHHHHHHHH
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALH---------S-LGIPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~---------~-~~~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
.+.|.|. |-+|..+|+.|.++|++|++.+|+.+..++..+.-. . ...++.++.+ ..+.+++.++++
T Consensus 2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilav---p~~~~~~vl~~l 77 (165)
T d2f1ka2 2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCT---PIQLILPTLEKL 77 (165)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECS---CHHHHHHHHHHH
T ss_pred EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccC---cHhhhhhhhhhh
Confidence 3666655 999999999999999999999999776665443210 0 1223444322 356788888888
Q ss_pred HHHhCCccEEEECCC
Q 022386 84 INHFGKLDILVNAAA 98 (298)
Q Consensus 84 ~~~~~~id~li~~ag 98 (298)
.....+=.++++.++
T Consensus 78 ~~~l~~~~iv~~~~s 92 (165)
T d2f1ka2 78 IPHLSPTAIVTDVAS 92 (165)
T ss_dssp GGGSCTTCEEEECCS
T ss_pred hhhcccccceeeccc
Confidence 766555556666554
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=96.08 E-value=0.027 Score=40.77 Aligned_cols=112 Identities=13% Similarity=0.145 Sum_probs=65.4
Q ss_pred EEEEecCCchhHHHHHHHHHHcCC--cEEEEcCChhHHHHHHHHHHhCC---CCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
.+.|.|+ |.+|..++..++.+|. ++++++++.+..+....++.+.. ........| . +...
T Consensus 3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~---~-----------~~~~ 67 (142)
T d1y6ja1 3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD---Y-----------SDVK 67 (142)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C---G-----------GGGT
T ss_pred eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc---H-----------HHhC
Confidence 4566686 9999999999999877 69999999876666666666532 122221111 1 1234
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccc
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 157 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~ 157 (298)
.-|++|..||.... + ..+. ...++.|. .+++.+.+.+.+... .+.+++++..
T Consensus 68 ~adivvitag~~~~-~--~~~r---~~l~~~N~----~i~~~i~~~i~~~~p-------~ai~ivvtNP 119 (142)
T d1y6ja1 68 DCDVIVVTAGANRK-P--GETR---LDLAKKNV----MIAKEVTQNIMKYYN-------HGVILVVSNP 119 (142)
T ss_dssp TCSEEEECCCC---------CH---HHHHHHHH----HHHHHHHHHHHHHCC-------SCEEEECSSS
T ss_pred CCceEEEecccccC-c--Ccch---hHHhhHHH----HHHHHHHHHhhccCC-------CceEEEecCh
Confidence 78999999985321 1 1222 23344444 556666666666431 4667777664
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=96.07 E-value=0.064 Score=38.64 Aligned_cols=113 Identities=12% Similarity=0.130 Sum_probs=68.0
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhC----CCCeEEEEc-cCCCHHHHHHHHHHHHHH
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEG-DVRKREDAVRVVESTINH 86 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~----~~~~~~~~~-Dls~~~~~~~~~~~~~~~ 86 (298)
|.+.|+|+ |.+|.++|..|+.++. ++++++.+.+..+....++.+. ........+ |.. .
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~--------------~ 66 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYA--------------D 66 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGG--------------G
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHH--------------H
Confidence 56777786 9999999999998886 8999999887666665555432 112222211 111 1
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 157 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~ 157 (298)
...-|++|.+||..... ..+. .+.++.|. .+++.+.+.+.+... .+.+++++..
T Consensus 67 ~~~advvvitag~~~~~---~~~r---~dl~~~N~----~i~~~i~~~i~k~~p-------~aivivvtNP 120 (142)
T d1uxja1 67 TANSDVIVVTSGAPRKP---GMSR---EDLIKVNA----DITRACISQAAPLSP-------NAVIIMVNNP 120 (142)
T ss_dssp GTTCSEEEECCSCC---------------CHHHHH----HHHHHHHHHHGGGCT-------TCEEEECSSS
T ss_pred hcCCCEEEEeeeccCCc---Ccch---hHHHhHHH----HHHHHHHHHHhccCC-------CceEEEeCCc
Confidence 23689999999954321 1122 23344444 477777887776542 4666666554
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.04 E-value=0.032 Score=41.22 Aligned_cols=76 Identities=17% Similarity=0.186 Sum_probs=49.6
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|.+++|.|+ |++|...+..+...|++|++++++.++++. +++.|.+... |-++.+..+. +. +.....
T Consensus 27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~----~k~~Ga~~~~---~~~~~~~~~~-~~---~~~~~~ 94 (168)
T d1rjwa2 27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLEL----AKELGADLVV---NPLKEDAAKF-MK---EKVGGV 94 (168)
T ss_dssp TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHH----HHHTTCSEEE---CTTTSCHHHH-HH---HHHSSE
T ss_pred CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhh----hhhcCcceec---ccccchhhhh-cc---cccCCC
Confidence 4789999875 999999988888999999999998876543 3444544332 3443322222 22 222456
Q ss_pred cEEEECCC
Q 022386 91 DILVNAAA 98 (298)
Q Consensus 91 d~li~~ag 98 (298)
+.+|.+++
T Consensus 95 ~~~v~~~~ 102 (168)
T d1rjwa2 95 HAAVVTAV 102 (168)
T ss_dssp EEEEESSC
T ss_pred ceEEeecC
Confidence 66777775
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=96.02 E-value=0.12 Score=37.14 Aligned_cols=113 Identities=11% Similarity=0.132 Sum_probs=68.1
Q ss_pred EEEEecCCchhHHHHHHHHHHcCC--cEEEEcCChhHHHHHHHHHHhC----CCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
.+.|+|+ |.+|..++..|+..|. ++++++.+.+.++.....+.+. ..+......+ +.+ .+
T Consensus 2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~--~~~-----------~~ 67 (142)
T d1guza1 2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSN--DYA-----------DT 67 (142)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEES--CGG-----------GG
T ss_pred EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecC--CHH-----------Hh
Confidence 4677796 9999999999999884 7999999987766555454332 2233333222 121 12
Q ss_pred CCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccc
Q 022386 88 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 157 (298)
Q Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~ 157 (298)
...|++|..+|..... ..+.. ..++.|.. +++.+.+.+.+... .+.++++|..
T Consensus 68 ~dadvvvitag~~~~~---g~~r~---~l~~~N~~----i~~~i~~~i~~~~p-------~aivivvtNP 120 (142)
T d1guza1 68 ANSDIVIITAGLPRKP---GMTRE---DLLMKNAG----IVKEVTDNIMKHSK-------NPIIIVVSNP 120 (142)
T ss_dssp TTCSEEEECCSCCCCT---TCCHH---HHHHHHHH----HHHHHHHHHHHHCS-------SCEEEECCSS
T ss_pred cCCeEEEEEEecCCCC---CCchH---HHHHHHHH----HHHHHHHHhhccCC-------CeEEEEecCC
Confidence 4789999999863321 22332 23444443 45555555554431 4667777654
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.01 E-value=0.0016 Score=48.07 Aligned_cols=40 Identities=25% Similarity=0.369 Sum_probs=34.4
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCC
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR 45 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~ 45 (298)
+-...|+||++||+|| |.+|..-++.|++.|++|++++..
T Consensus 6 pl~~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~ 45 (150)
T d1kyqa1 6 QLAHQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD 45 (150)
T ss_dssp EEEECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred hhheeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3345799999999999 559999999999999999998654
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=96.01 E-value=0.0071 Score=45.59 Aligned_cols=41 Identities=12% Similarity=0.115 Sum_probs=35.5
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHH
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAV 53 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~ 53 (298)
.|++.|.|+ |.+|.++|..|+++|++|.+++|+.+..+...
T Consensus 1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~ 41 (184)
T d1bg6a2 1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQ 41 (184)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 378999988 88999999999999999999999977655543
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=95.99 E-value=0.0069 Score=45.51 Aligned_cols=79 Identities=14% Similarity=0.216 Sum_probs=50.4
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHH-HHHHHHHHHHHh
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRED-AVRVVESTINHF 87 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~-~~~~~~~~~~~~ 87 (298)
-.|.+++|.|+ +|+|...+..+...|+ .|++++++.++++.. ++.|.+. ++ |.++++. .++..+... -
T Consensus 27 k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a----~~~GAd~-~i--n~~~~~~~~~~~~~~~~--~ 96 (175)
T d1cdoa2 27 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKA----KVFGATD-FV--NPNDHSEPISQVLSKMT--N 96 (175)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH----HHTTCCE-EE--CGGGCSSCHHHHHHHHH--T
T ss_pred CCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHH----HHcCCcE-EE--cCCCcchhHHHHHHhhc--c
Confidence 35789999985 6788888888888887 577888887765443 3345433 22 3332222 233333222 2
Q ss_pred CCccEEEECCC
Q 022386 88 GKLDILVNAAA 98 (298)
Q Consensus 88 ~~id~li~~ag 98 (298)
+.+|+++.+.|
T Consensus 97 ~G~d~vid~~G 107 (175)
T d1cdoa2 97 GGVDFSLECVG 107 (175)
T ss_dssp SCBSEEEECSC
T ss_pred CCcceeeeecC
Confidence 58999999998
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=95.93 E-value=0.013 Score=43.49 Aligned_cols=83 Identities=14% Similarity=0.120 Sum_probs=55.5
Q ss_pred EEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHh-------CCCCeEEEEccCCCHHHHHHHH---HHHH
Q 022386 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS-------LGIPAIGLEGDVRKREDAVRVV---ESTI 84 (298)
Q Consensus 15 ~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~Dls~~~~~~~~~---~~~~ 84 (298)
+-|. |.|-+|..+|++|+++|++|++.+|+.++.+++.+.-.. .-.+.+.+.+-+.+.+.++..+ +.+.
T Consensus 3 IgiI-GlG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~~ 81 (161)
T d1vpda2 3 VGFI-GLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGII 81 (161)
T ss_dssp EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHH
T ss_pred EEEE-ehhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcchh
Confidence 4455 458999999999999999999999998877665432110 0012344555678888888876 3344
Q ss_pred HHhCCccEEEECCC
Q 022386 85 NHFGKLDILVNAAA 98 (298)
Q Consensus 85 ~~~~~id~li~~ag 98 (298)
....+=+++|.+..
T Consensus 82 ~~~~~g~iiid~sT 95 (161)
T d1vpda2 82 EGAKPGTVLIDMSS 95 (161)
T ss_dssp HHCCTTCEEEECSC
T ss_pred hccCCCCEEEECCC
Confidence 44444556666654
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=95.90 E-value=0.11 Score=37.68 Aligned_cols=118 Identities=10% Similarity=0.097 Sum_probs=70.7
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhC----CCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
..+.|.|+ |.+|..++..|..++. ++++++++.+..+....++.+. +.+......|-. +..
T Consensus 4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~~-------------~~~ 69 (150)
T d1t2da1 4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-------------DDL 69 (150)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-------------GGG
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecccc-------------ccc
Confidence 35777785 9999999988888776 7999999887776666666442 233333332211 123
Q ss_pred CCccEEEECCCCCCC-CCC-CCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccc
Q 022386 88 GKLDILVNAAAGNFL-VPA-EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (298)
Q Consensus 88 ~~id~li~~ag~~~~-~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~ 158 (298)
..-|++|..+|.... +.. .+.+.. ..+..|. .+++.+.+.+.+... .+.++++|...
T Consensus 70 ~~advvvitag~~~~~g~~~~~~~R~---~l~~~N~----~iv~~i~~~i~~~~p-------~aivivvtNPv 128 (150)
T d1t2da1 70 AGADVVIVTAGFTKAPGKSDKEWNRD---DLLPLNN----KIMIEIGGHIKKNCP-------NAFIIVVTNPV 128 (150)
T ss_dssp TTCSEEEECCSCSSCTTCCSTTCCGG---GGHHHHH----HHHHHHHHHHHHHCT-------TSEEEECSSSH
T ss_pred CCCcEEEEecccccCCCCCccccchh---HHHHHHH----HHHHHHHHHHHhcCC-------CeEEEEecCch
Confidence 478999999995422 111 111222 2344443 556666666665532 46677776643
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=95.88 E-value=0.067 Score=38.72 Aligned_cols=117 Identities=12% Similarity=0.152 Sum_probs=68.5
Q ss_pred EEEEecCCchhHHHHHHHHHHc-C--CcEEEEcCChhHHHHHHHHHHhCCCCeEEE-EccCCCHHHHHHHHHHHHHHhCC
Q 022386 14 VALLTGGGSGIGFEISLQLGKH-G--AAIAIMGRRKTVLRSAVAALHSLGIPAIGL-EGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~-G--~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~-~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
.+.|+|++|.+|.+++..|+.+ + .++++++... ..+...-++.+........ ...-.+.+ .+ ..
T Consensus 2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~~~~~~~~---~~--------~~ 69 (145)
T d2cmda1 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATP---AL--------EG 69 (145)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEECSSCCHH---HH--------TT
T ss_pred EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEEEcCCCcc---cc--------CC
Confidence 5789999999999999988643 4 5799999864 4445555666643222211 12222222 21 25
Q ss_pred ccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccccc
Q 022386 90 LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 159 (298)
Q Consensus 90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~ 159 (298)
-|++|..+|.... + ..+..+ .++.|.. +.+.+.+.+.+... .+.++.++....
T Consensus 70 aDvvvitaG~~~k-~--g~~R~d---l~~~N~~----i~~~v~~~i~~~~p-------~aivivvtNPvD 122 (145)
T d2cmda1 70 ADVVLISAGVRRK-P--GMDRSD---LFNVNAG----IVKNLVQQVAKTCP-------KACIGIITNPVN 122 (145)
T ss_dssp CSEEEECCSCCCC-T--TCCGGG---GHHHHHH----HHHHHHHHHHHHCT-------TSEEEECSSSHH
T ss_pred CCEEEECCCccCC-C--Ccchhh---HHHHHHH----HHHHHHHHHHhhCC-------CcEEEEccCCch
Confidence 7999999996422 1 223322 3455544 45555555555431 466777776543
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=95.82 E-value=0.033 Score=40.83 Aligned_cols=120 Identities=15% Similarity=0.097 Sum_probs=69.8
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhC----CCCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.+.+.|.|+ |.+|..++..++..|. ++++++.+.+..+....++.+. +....... -++.+ ..+
T Consensus 7 ~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~--~~~~~---~~~------ 74 (154)
T d1pzga1 7 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA--EYSYE---AAL------ 74 (154)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE--ECSHH---HHH------
T ss_pred CCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEec--cCchh---hhh------
Confidence 567888897 9999999998888886 7999999987777666666542 11111111 11121 111
Q ss_pred hCCccEEEECCCCCCC-CCC-CCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccc
Q 022386 87 FGKLDILVNAAAGNFL-VPA-EDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 158 (298)
Q Consensus 87 ~~~id~li~~ag~~~~-~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~ 158 (298)
..-|++|..+|.... +.. .+.+.. +.+..|.. +++.+.+.+.+... .+.++++|...
T Consensus 75 -~~adiVvitag~~~~~g~~~~~~tR~---~l~~~n~~----iv~~i~~~i~~~~p-------~aiviivsNPv 133 (154)
T d1pzga1 75 -TGADCVIVTAGLTKVPGKPDSEWSRN---DLLPFNSK----IIREIGQNIKKYCP-------KTFIIVVTNPL 133 (154)
T ss_dssp -TTCSEEEECCSCSSCTTCCGGGCCGG---GGHHHHHH----HHHHHHHHHHHHCT-------TCEEEECCSSH
T ss_pred -cCCCeEEEecccccCCCCCCcccchh---hhhhhhHH----HHHHHHHHHHhcCC-------CcEEEEeCCcH
Confidence 378999999986422 111 112322 22334443 45555555555432 46677776643
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=95.80 E-value=0.011 Score=45.51 Aligned_cols=79 Identities=13% Similarity=0.128 Sum_probs=51.1
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
.|.+++|.|+ +++|...+......|+ .|++++++.++++. .++.+.+.. .|-.+. ++.+.+.++. ....
T Consensus 25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~----a~~~Ga~~~---~~~~~~-~~~~~i~~~t-~g~g 94 (195)
T d1kola2 25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAH----AKAQGFEIA---DLSLDT-PLHEQIAALL-GEPE 94 (195)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH----HHHTTCEEE---ETTSSS-CHHHHHHHHH-SSSC
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHh----hhhccccEE---EeCCCc-CHHHHHHHHh-CCCC
Confidence 4889999986 8999888888878888 67788888765543 233444321 233333 3333333332 2247
Q ss_pred ccEEEECCCC
Q 022386 90 LDILVNAAAG 99 (298)
Q Consensus 90 id~li~~ag~ 99 (298)
+|++|.+.|.
T Consensus 95 ~D~vid~vG~ 104 (195)
T d1kola2 95 VDCAVDAVGF 104 (195)
T ss_dssp EEEEEECCCT
T ss_pred cEEEEECccc
Confidence 9999999984
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=95.76 E-value=0.0081 Score=45.84 Aligned_cols=43 Identities=21% Similarity=0.237 Sum_probs=36.7
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHH
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL 56 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~ 56 (298)
|++.|.|+ |-+|..+|..|+.+|++|++.+++.+.+++..+.+
T Consensus 5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i 47 (186)
T d1wdka3 5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEA 47 (186)
T ss_dssp SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhh
Confidence 46788888 78999999999999999999999988777665554
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=95.70 E-value=0.053 Score=40.13 Aligned_cols=78 Identities=19% Similarity=0.119 Sum_probs=57.8
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
..-+++|.|+. -.|+.-++.....|+.|.+++.+.+.++++...+.. .+.+ -.++++.+++.+. .-
T Consensus 31 ~pa~V~ViGaG-vaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~---~~~~---~~~~~~~l~~~~~-------~a 96 (168)
T d1pjca1 31 KPGKVVILGGG-VVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS---RVEL---LYSNSAEIETAVA-------EA 96 (168)
T ss_dssp CCCEEEEECCS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---GSEE---EECCHHHHHHHHH-------TC
T ss_pred CCcEEEEECCC-hHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcc---ccee---ehhhhhhHHHhhc-------cC
Confidence 45688888775 459999999999999999999999888877766543 2333 3556666665554 68
Q ss_pred cEEEECCCCCCC
Q 022386 91 DILVNAAAGNFL 102 (298)
Q Consensus 91 d~li~~ag~~~~ 102 (298)
|++|..+-+...
T Consensus 97 DivI~aalipG~ 108 (168)
T d1pjca1 97 DLLIGAVLVPGR 108 (168)
T ss_dssp SEEEECCCCTTS
T ss_pred cEEEEeeecCCc
Confidence 999999976443
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=95.66 E-value=0.22 Score=35.55 Aligned_cols=112 Identities=14% Similarity=0.095 Sum_probs=69.9
Q ss_pred EEEEecCCchhHHHHHHHHHHcCC--cEEEEcCChhHHHHHHHHHHhC---CCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL---GIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
.+.|.|+ |.+|..++..++.+|. ++++++.+.+.++....++.+. .........|. + .+.
T Consensus 2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~---~-----------~~~ 66 (140)
T d1a5za1 2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY---A-----------DLK 66 (140)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG---G-----------GGT
T ss_pred EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcH---H-----------Hhc
Confidence 4667786 8999999999998875 6999999987776666555442 22333333222 1 124
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccc
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 157 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~ 157 (298)
.-|++|..+|..... ..+..+ .+..|. .+++.+.+.+.+... .+.+++++..
T Consensus 67 ~adivvitag~~~~~---g~~r~d---l~~~N~----~I~~~i~~~i~~~~p-------~aivivvtNP 118 (140)
T d1a5za1 67 GSDVVIVAAGVPQKP---GETRLQ---LLGRNA----RVMKEIARNVSKYAP-------DSIVIVVTNP 118 (140)
T ss_dssp TCSEEEECCCCCCCS---SCCHHH---HHHHHH----HHHHHHHHHHHHHCT-------TCEEEECSSS
T ss_pred CCCEEEEecccccCC---Ccchhh---hhcccc----chHHHHHHHHHhcCC-------CcEEEEeCCc
Confidence 689999999853321 223332 334443 466667777766542 4666666653
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=95.64 E-value=0.01 Score=44.15 Aligned_cols=42 Identities=21% Similarity=0.189 Sum_probs=37.5
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVL 49 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~ 49 (298)
-++.||+++|.|-+.-+|+-++..|.++|++|.++.+....+
T Consensus 33 i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l 74 (166)
T d1b0aa1 33 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNL 74 (166)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCH
T ss_pred cccccceEEEEeccccccHHHHHHHHHhhccccccccccchh
Confidence 378999999999999999999999999999999998776433
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.49 E-value=0.012 Score=43.94 Aligned_cols=42 Identities=17% Similarity=0.177 Sum_probs=38.1
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVL 49 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~ 49 (298)
-+++||.++|.|-+.-+|+-++..|.++|++|.++......+
T Consensus 35 i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l 76 (170)
T d1a4ia1 35 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHL 76 (170)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSH
T ss_pred cccccceEEEEecCCccchHHHHHHHhccCceEEEecccccH
Confidence 378999999999999999999999999999999998876543
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=95.25 E-value=0.31 Score=34.83 Aligned_cols=113 Identities=14% Similarity=0.100 Sum_probs=69.3
Q ss_pred EEEEecCCchhHHHHHHHHHHcCC--cEEEEcCChhHHHHHHHHHHhC---CCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL---GIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
.+.|+|+ |.+|.++|..++.+|. ++++++.+.+..+....++.+. .........+ +.+ . ..
T Consensus 3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~--~~~---~--------~~ 68 (143)
T d1llda1 3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD--DPE---I--------CR 68 (143)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEES--CGG---G--------GT
T ss_pred EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCC--CHH---H--------hh
Confidence 4667786 9999999999999987 6999999987776666666553 2222222221 111 1 13
Q ss_pred CccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccc
Q 022386 89 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 157 (298)
Q Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~ 157 (298)
.-|++|..||... + ...+..+ .++.|. .+.+.+.+.+.+... .+.++.+|..
T Consensus 69 daDvVVitaG~~~-~--~g~~R~d---l~~~N~----~i~~~i~~~i~~~~p-------~ai~ivvtNP 120 (143)
T d1llda1 69 DADMVVITAGPRQ-K--PGQSRLE---LVGATV----NILKAIMPNLVKVAP-------NAIYMLITNP 120 (143)
T ss_dssp TCSEEEECCCCCC-C--TTCCHHH---HHHHHH----HHHHHHHHHHHHHCT-------TSEEEECCSS
T ss_pred CCcEEEEeccccc-C--CCCchhh---hhhhhH----HHHHHHHHHHHhhCC-------CeEEEEeCCc
Confidence 5799999998532 1 1234433 344554 455555566555431 4666676653
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.02 E-value=0.093 Score=38.53 Aligned_cols=84 Identities=12% Similarity=0.083 Sum_probs=54.2
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHH-------HhCCCCeEEEEccCCCHHHHHHHHHH---H
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL-------HSLGIPAIGLEGDVRKREDAVRVVES---T 83 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~-------~~~~~~~~~~~~Dls~~~~~~~~~~~---~ 83 (298)
++-|. |.|-+|.++|++|+++|++|.+.+|+.++.+.+.+.- .+.-.....+..-+.+...++..+.. +
T Consensus 3 kIg~I-GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~~ 81 (162)
T d3cuma2 3 QIAFI-GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 81 (162)
T ss_dssp EEEEE-CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTCH
T ss_pred EEEEE-EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhccccc
Confidence 35555 5689999999999999999999999987666544321 11112234555567777777776543 3
Q ss_pred HHHhCCccEEEECCC
Q 022386 84 INHFGKLDILVNAAA 98 (298)
Q Consensus 84 ~~~~~~id~li~~ag 98 (298)
.....+=+++|.+..
T Consensus 82 ~~~l~~g~iiid~st 96 (162)
T d3cuma2 82 LAHIAPGTLVLECST 96 (162)
T ss_dssp HHHSCTTCEEEECSC
T ss_pred cccCCCCCEEEECCC
Confidence 333334456666654
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=94.99 E-value=0.0096 Score=46.93 Aligned_cols=49 Identities=22% Similarity=0.327 Sum_probs=40.7
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL 56 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~ 56 (298)
..+|+||+++|-| .|.+|..+|+.|.+.|+.|++++.+...+.....+.
T Consensus 34 ~~~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~ 82 (230)
T d1leha1 34 SDSLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE 82 (230)
T ss_dssp SCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhc
Confidence 4579999999997 567899999999999999999999877666555443
|
| >d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein PH1948 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=94.93 E-value=0.059 Score=41.29 Aligned_cols=78 Identities=21% Similarity=0.204 Sum_probs=60.0
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
..+++|+++|=.|+++|. ++..++.+|+ .|+.++.+...++...+.+...+.+..++..|+.+.
T Consensus 42 ~~dl~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~~------------ 106 (201)
T d1wy7a1 42 LGDIEGKVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF------------ 106 (201)
T ss_dssp TTSSTTCEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC------------
T ss_pred cCCCCCCEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHHcCCCceEEECchhhh------------
Confidence 357899999999988772 2334557787 799999998877777777777788889998887542
Q ss_pred HhCCccEEEECCCCC
Q 022386 86 HFGKLDILVNAAAGN 100 (298)
Q Consensus 86 ~~~~id~li~~ag~~ 100 (298)
.+++|++|.|.-..
T Consensus 107 -~~~fD~Vi~nPP~~ 120 (201)
T d1wy7a1 107 -NSRVDIVIMNPPFG 120 (201)
T ss_dssp -CCCCSEEEECCCCS
T ss_pred -CCcCcEEEEcCccc
Confidence 35899999998653
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=94.92 E-value=0.068 Score=42.23 Aligned_cols=80 Identities=18% Similarity=0.258 Sum_probs=51.7
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCCh-------------------hHHHHHHHHHHhCCCCeEEEEcc
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK-------------------TVLRSAVAALHSLGIPAIGLEGD 69 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~D 69 (298)
|++++|+|.| .||+|-.++..|+..|. +++++|.+. .+.+.+.+.+.+..+.+.....+
T Consensus 28 L~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~ 106 (247)
T d1jw9b_ 28 LKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN 106 (247)
T ss_dssp HHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhh
Confidence 6678999999 67899999999999999 688887642 34555556666655554443333
Q ss_pred CC-CHHHHHHHHHHHHHHhCCccEEEECC
Q 022386 70 VR-KREDAVRVVESTINHFGKLDILVNAA 97 (298)
Q Consensus 70 ls-~~~~~~~~~~~~~~~~~~id~li~~a 97 (298)
.. +.......+ ...|++|.+.
T Consensus 107 ~~~~~~~~~~~~-------~~~divid~~ 128 (247)
T d1jw9b_ 107 ALLDDAELAALI-------AEHDLVLDCT 128 (247)
T ss_dssp SCCCHHHHHHHH-------HTSSEEEECC
T ss_pred hhhhhccccccc-------cccceeeecc
Confidence 22 222332222 2567777654
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.84 E-value=0.025 Score=42.28 Aligned_cols=41 Identities=20% Similarity=0.326 Sum_probs=37.3
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
...+++||.++|.|-|.=+|+-++..|+++|++|..+..+.
T Consensus 23 ~g~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~ 63 (171)
T d1edza1 23 EGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNN 63 (171)
T ss_dssp TTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSE
T ss_pred ccCCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEecccc
Confidence 44589999999999999999999999999999999887663
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=94.66 E-value=0.12 Score=38.36 Aligned_cols=79 Identities=20% Similarity=0.177 Sum_probs=54.1
Q ss_pred CCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCC------------------CCeEEEEccCCCHHHHHHHHH
Q 022386 20 GGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG------------------IPAIGLEGDVRKREDAVRVVE 81 (298)
Q Consensus 20 ~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~------------------~~~~~~~~Dls~~~~~~~~~~ 81 (298)
|.|-+|.+++++|+++|++|.+.+|+.++.+++.+.-.... .....+..-+.....+...+.
T Consensus 8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (178)
T d1pgja2 8 GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAATDSTIE 87 (178)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHHHHHHH
T ss_pred eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcchhhhhhh
Confidence 67899999999999999999999999988877766532210 111223334445566666667
Q ss_pred HHHHHhCCccEEEECCC
Q 022386 82 STINHFGKLDILVNAAA 98 (298)
Q Consensus 82 ~~~~~~~~id~li~~ag 98 (298)
.+...+..=+++|+..-
T Consensus 88 ~~~~~~~~~~iii~~st 104 (178)
T d1pgja2 88 QLKKVFEKGDILVDTGN 104 (178)
T ss_dssp HHHHHCCTTCEEEECCC
T ss_pred hhhhhccccceecccCc
Confidence 76666656566766653
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=94.57 E-value=0.032 Score=39.61 Aligned_cols=73 Identities=14% Similarity=0.126 Sum_probs=53.8
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCcEEE-EcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~Vv~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
.+.|.|++|.+|+++++.+.+.|+.++. ++++... .+ ...+ +..|+|.++.+.+.++...+. ++-+
T Consensus 2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~------~~--~~~D---VvIDFS~p~~~~~~l~~~~~~--~~p~ 68 (128)
T d1vm6a3 2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE------EL--DSPD---VVIDFSSPEALPKTVDLCKKY--RAGL 68 (128)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE------EC--SCCS---EEEECSCGGGHHHHHHHHHHH--TCEE
T ss_pred EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH------Hh--ccCC---EEEEecCHHHHHHHHHHHHhc--CCCE
Confidence 5899999999999999999999998765 4544321 01 1122 346999999999999988776 5566
Q ss_pred EEECCCC
Q 022386 93 LVNAAAG 99 (298)
Q Consensus 93 li~~ag~ 99 (298)
++-..|.
T Consensus 69 ViGTTG~ 75 (128)
T d1vm6a3 69 VLGTTAL 75 (128)
T ss_dssp EECCCSC
T ss_pred EEEcCCC
Confidence 7777763
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=94.53 E-value=0.026 Score=39.95 Aligned_cols=71 Identities=14% Similarity=0.159 Sum_probs=51.2
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccE
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDI 92 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ 92 (298)
|.++|.|. +.+|+.+++.| +|..|+++..+.+..+.. ... .+.++..|.++++.++++- ..+.+.
T Consensus 1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~----~~~--~~~~i~Gd~~~~~~L~~a~------i~~A~~ 65 (129)
T d2fy8a1 1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKV----LRS--GANFVHGDPTRVSDLEKAN------VRGARA 65 (129)
T ss_dssp CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHH----HHT--TCEEEESCTTSHHHHHHTT------CTTCSE
T ss_pred CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHH----Hhc--CccccccccCCHHHHHHhh------hhcCcE
Confidence 46788875 77899999999 466788888887755433 232 3678889999998877742 246777
Q ss_pred EEECCC
Q 022386 93 LVNAAA 98 (298)
Q Consensus 93 li~~ag 98 (298)
+|....
T Consensus 66 vi~~~~ 71 (129)
T d2fy8a1 66 VIVNLE 71 (129)
T ss_dssp EEECCS
T ss_pred EEEecc
Confidence 877553
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=94.44 E-value=0.023 Score=41.88 Aligned_cols=33 Identities=18% Similarity=0.084 Sum_probs=30.3
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~ 47 (298)
.++|.|+ |.+|..++..|++.|++|.+++|+..
T Consensus 2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~ 34 (167)
T d1ks9a2 2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQ 34 (167)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHH
Confidence 6888888 99999999999999999999999864
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=94.43 E-value=0.36 Score=35.22 Aligned_cols=84 Identities=10% Similarity=-0.022 Sum_probs=53.7
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCC--cEEEEcCChhHHHHHHHHHH---------h-CCCCeEEEEccCCCHHHHHHHH
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALH---------S-LGIPAIGLEGDVRKREDAVRVV 80 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~---------~-~~~~~~~~~~Dls~~~~~~~~~ 80 (298)
|.++|.| .|-+|..+|+.|.+.|. +|+.++++.+.++...+.-. . ...+.+++.+- .-.+.+...+
T Consensus 2 k~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila-~p~~~~~~vl 79 (171)
T d2g5ca2 2 QNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLS-SPVRTFREIA 79 (171)
T ss_dssp CEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEEC-SCHHHHHHHH
T ss_pred CEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhcccccccccc-CCchhhhhhh
Confidence 4688887 59999999999999996 67888998776665544310 0 00112222222 2356788888
Q ss_pred HHHHHHhCCccEEEECCC
Q 022386 81 ESTINHFGKLDILVNAAA 98 (298)
Q Consensus 81 ~~~~~~~~~id~li~~ag 98 (298)
+++......=.+++...+
T Consensus 80 ~~l~~~~~~~~ii~d~~s 97 (171)
T d2g5ca2 80 KKLSYILSEDATVTDQGS 97 (171)
T ss_dssp HHHHHHSCTTCEEEECCS
T ss_pred hhhhcccccccccccccc
Confidence 888776655555666554
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.38 E-value=0.55 Score=33.43 Aligned_cols=112 Identities=11% Similarity=0.038 Sum_probs=69.5
Q ss_pred EEEEecCCchhHHHHHHHHHHcCC--cEEEEcCChhHHHHHHHHHHhC----CCCeEEEEc-cCCCHHHHHHHHHHHHHH
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRKTVLRSAVAALHSL----GIPAIGLEG-DVRKREDAVRVVESTINH 86 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~----~~~~~~~~~-Dls~~~~~~~~~~~~~~~ 86 (298)
.+.|.|+ |.+|..+|..++.+|. ++++++.+.+..+...-++.+. ......... |.. .
T Consensus 2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~~--------------~ 66 (142)
T d1ojua1 2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYS--------------L 66 (142)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGG--------------G
T ss_pred EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCHH--------------H
Confidence 4677786 9999999999998886 5999999987776665556542 222232222 211 1
Q ss_pred hCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEeccc
Q 022386 87 FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 157 (298)
Q Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~ 157 (298)
+..-|++|..+|..... ..+..+ .+. ....+.+.+.+.+.+... .+.++++|..
T Consensus 67 ~~~adiVvitag~~~~~---g~~r~~---l~~----~n~~i~~~i~~~i~~~~p-------~aivivvtNP 120 (142)
T d1ojua1 67 LKGSEIIVVTAGLARKP---GMTRLD---LAH----KNAGIIKDIAKKIVENAP-------ESKILVVTNP 120 (142)
T ss_dssp GTTCSEEEECCCCCCCS---SCCHHH---HHH----HHHHHHHHHHHHHHTTST-------TCEEEECSSS
T ss_pred hccccEEEEeccccCCC---CCchHH---HHH----HhhHHHHHHHHHHHhhCC-------CcEEEEecCC
Confidence 24789999999853221 223332 233 344566677777766532 4666676663
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.38 E-value=0.055 Score=39.88 Aligned_cols=39 Identities=26% Similarity=0.342 Sum_probs=35.0
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~ 47 (298)
..|.||+++|.|- |-+|+.+|+.|...|++|+++..+..
T Consensus 20 ~~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~ 58 (163)
T d1li4a1 20 VMIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPI 58 (163)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred ceecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccc
Confidence 4689999999975 57999999999999999999999864
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=94.12 E-value=0.15 Score=36.30 Aligned_cols=76 Identities=11% Similarity=0.110 Sum_probs=52.7
Q ss_pred EEEEecCCchhHHHHHHHHHHc-CCcEEE-EcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 14 VALLTGGGSGIGFEISLQLGKH-GAAIAI-MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~-G~~Vv~-~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
++.|.|++|.+|+++++...+. ++.++. +++... + ..+...+.+ +..|+|.++.+...++...+. ++-
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~-~----~~~~~~~~D---vvIDFS~p~~~~~~~~~~~~~--~~~ 70 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDP-L----SLLTDGNTE---VVIDFTHPDVVMGNLEFLIDN--GIH 70 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCC-T----HHHHTTTCS---EEEECCCTTTHHHHHHHHHHT--TCE
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc-h----hhhccccCC---EEEEcccHHHHHHHHHHHHhc--CCC
Confidence 4789999999999999988764 556554 555432 1 122233333 346999999999999888765 566
Q ss_pred EEEECCCC
Q 022386 92 ILVNAAAG 99 (298)
Q Consensus 92 ~li~~ag~ 99 (298)
+++-..|+
T Consensus 71 ~ViGTTG~ 78 (135)
T d1yl7a1 71 AVVGTTGF 78 (135)
T ss_dssp EEECCCCC
T ss_pred EEEecccc
Confidence 67766663
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=93.81 E-value=0.76 Score=33.02 Aligned_cols=105 Identities=12% Similarity=0.154 Sum_probs=57.5
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCC-------cEEEEcCChh--HHHHHHHHHHhCC-CCeEEEEccCCCHHHHHHHHHH
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGA-------AIAIMGRRKT--VLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVES 82 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~-------~Vv~~~r~~~--~~~~~~~~~~~~~-~~~~~~~~Dls~~~~~~~~~~~ 82 (298)
..+.|+||+|.+|.+++..|+..+. .+++.+.+.. .++...-++.+.. .....+. .++. ...
T Consensus 4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~--~~~---- 75 (154)
T d5mdha1 4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVI--ATDK--EEI---- 75 (154)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEE--EESC--HHH----
T ss_pred eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccc--cCcc--ccc----
Confidence 4799999999999999999987543 3556655533 3333333333322 1222221 1111 111
Q ss_pred HHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Q 022386 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKG 138 (298)
Q Consensus 83 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 138 (298)
.+...|++|..+|..... ..+.++ .++.| ..+++.+.+.+.+.
T Consensus 76 ---~~~~~dvVVitag~~~~~---g~sr~d---ll~~N----~~i~k~~~~~i~k~ 118 (154)
T d5mdha1 76 ---AFKDLDVAILVGSMPRRD---GMERKD---LLKAN----VKIFKCQGAALDKY 118 (154)
T ss_dssp ---HTTTCSEEEECCSCCCCT---TCCTTT---THHHH----HHHHHHHHHHHHHH
T ss_pred ---ccCCceEEEEecccCCCC---CCchhH---HHHHh----HHHHHHHHHHHHhh
Confidence 224799999999864321 122222 23333 45666666666553
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=93.57 E-value=0.077 Score=38.51 Aligned_cols=41 Identities=20% Similarity=0.185 Sum_probs=33.4
Q ss_pred EEEEecCCchhHHHHHHHHHHcC-CcEEEEcCChhHHHHHHHH
Q 022386 14 VALLTGGGSGIGFEISLQLGKHG-AAIAIMGRRKTVLRSAVAA 55 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G-~~Vv~~~r~~~~~~~~~~~ 55 (298)
.+.+.|+ |-+|.++++.|++.| .+|++++|+.++.+++.++
T Consensus 2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~ 43 (152)
T d1yqga2 2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE 43 (152)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH
T ss_pred EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhh
Confidence 4566665 999999999999888 7899999998777666554
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=93.56 E-value=0.2 Score=37.43 Aligned_cols=83 Identities=16% Similarity=0.058 Sum_probs=51.1
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHH---------------HH
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKRE---------------DA 76 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~---------------~~ 76 (298)
.-.++|.|+. -.|...++.....|+.|.+++.+.+.++++..... .++..+..+.. ..
T Consensus 29 pa~VvViGaG-vaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~------~~i~~~~~~~~~~~~~~gyA~~~s~~~~ 101 (183)
T d1l7da1 29 PARVLVFGVG-VAGLQAIATAKRLGAVVMATDVRAATKEQVESLGG------KFITVDDEAMKTAETAGGYAKEMGEEFR 101 (183)
T ss_dssp CCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTC------EECCC-----------------------
T ss_pred CcEEEEEcCc-HHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhc------ceEEEeccccccccccccchhhcCHHHH
Confidence 3467777764 56899999999999999999999887776654432 11211111111 12
Q ss_pred HHHHHHHHHHhCCccEEEECCCCCC
Q 022386 77 VRVVESTINHFGKLDILVNAAAGNF 101 (298)
Q Consensus 77 ~~~~~~~~~~~~~id~li~~ag~~~ 101 (298)
++.-+.+.+....-|++|..+-+..
T Consensus 102 ~~~~~~l~~~l~~aDlVI~talipG 126 (183)
T d1l7da1 102 KKQAEAVLKELVKTDIAITTALIPG 126 (183)
T ss_dssp CCHHHHHHHHHTTCSEEEECCCCTT
T ss_pred HHHHHHHHHHHHhhhhheeeeecCC
Confidence 2223334444568999999997643
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=93.55 E-value=0.37 Score=32.82 Aligned_cols=71 Identities=17% Similarity=0.218 Sum_probs=52.9
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.+.++.|.| +|-||+-++....+.|+++++++.+.+... . ..--.++..|+.|.+.+.++.... .+
T Consensus 10 ~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA---~-----~va~~~i~~~~~d~~~l~~~~~~~-----~~ 75 (111)
T d1kjqa2 10 AATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPA---M-----HVAHRSHVINMLDGDALRRVVELE-----KP 75 (111)
T ss_dssp TCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGG---G-----GGSSEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred CCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCch---h-----hcCCeEEECCCCCHHHHHHHHHhh-----CC
Confidence 345789988 578999999999999999999998754211 1 111356789999999999887653 67
Q ss_pred cEEEE
Q 022386 91 DILVN 95 (298)
Q Consensus 91 d~li~ 95 (298)
|++-.
T Consensus 76 DviT~ 80 (111)
T d1kjqa2 76 HYIVP 80 (111)
T ss_dssp SEEEE
T ss_pred ceEEE
Confidence 87743
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=93.52 E-value=0.18 Score=34.66 Aligned_cols=34 Identities=24% Similarity=0.431 Sum_probs=29.0
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
.|.++|.|| |-+|.++|..|.+.|.+|.++.+..
T Consensus 22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~ 55 (117)
T d1ebda2 22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAG 55 (117)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCeEEEECC-CccceeeeeeecccccEEEEEEecc
Confidence 367777765 6889999999999999999998764
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.47 E-value=0.03 Score=48.32 Aligned_cols=35 Identities=26% Similarity=0.411 Sum_probs=30.1
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCC
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR 45 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~ 45 (298)
|++..|||.|+ ||||-++++.|+..|. ++.+++.+
T Consensus 35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D 70 (426)
T d1yovb1 35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD 70 (426)
T ss_dssp HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCC
T ss_pred HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECC
Confidence 44567999988 7799999999999999 79998875
|
| >d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein Ta1320 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=93.44 E-value=0.067 Score=40.84 Aligned_cols=73 Identities=18% Similarity=0.157 Sum_probs=53.2
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
..++.||+||=.|+++|+ ++..++..|+ .|+.++.+...++... ..-.++.++.+|+.+.
T Consensus 44 ~~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar----~N~~~~~~~~~D~~~l------------ 104 (197)
T d1ne2a_ 44 DGNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAK----RNCGGVNFMVADVSEI------------ 104 (197)
T ss_dssp HTSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHH----HHCTTSEEEECCGGGC------------
T ss_pred cCCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHH----HccccccEEEEehhhc------------
Confidence 358999999999999883 3345677887 5999998876544332 3345688999998642
Q ss_pred HhCCccEEEECCCC
Q 022386 86 HFGKLDILVNAAAG 99 (298)
Q Consensus 86 ~~~~id~li~~ag~ 99 (298)
-+++|++|.|.-+
T Consensus 105 -~~~fD~Vi~NPPf 117 (197)
T d1ne2a_ 105 -SGKYDTWIMNPPF 117 (197)
T ss_dssp -CCCEEEEEECCCC
T ss_pred -CCcceEEEeCccc
Confidence 2689999999864
|
| >d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermotoga maritima [TaxId: 2336]
Probab=93.17 E-value=0.1 Score=39.64 Aligned_cols=80 Identities=18% Similarity=0.106 Sum_probs=61.1
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l 93 (298)
.+=+|-|+||..+++.+.+ . +..|+.++++.+.++...+.+...+.++.+++.++++...+..-+ ..+.+|.+
T Consensus 27 ~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~~~~~-----~~~~vdgI 99 (192)
T d1m6ya2 27 ILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTL-----GIEKVDGI 99 (192)
T ss_dssp EEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHT-----TCSCEEEE
T ss_pred EEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHHHHHHc-----CCCCccee
Confidence 3446777888888888876 3 468999999999888888888888888999999998754432211 13589999
Q ss_pred EECCCCC
Q 022386 94 VNAAAGN 100 (298)
Q Consensus 94 i~~ag~~ 100 (298)
+...|.+
T Consensus 100 l~DlGvS 106 (192)
T d1m6ya2 100 LMDLGVS 106 (192)
T ss_dssp EEECSCC
T ss_pred eeccchh
Confidence 9998864
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=93.14 E-value=0.17 Score=36.60 Aligned_cols=35 Identities=14% Similarity=0.216 Sum_probs=28.8
Q ss_pred CcEEEEe-cCCchhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 12 GKVALLT-GGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 12 gk~~lVt-G~t~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
++.++|. .+++-||.++|..|+++|++|.++.+..
T Consensus 39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~ 74 (156)
T d1djqa2 39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 74 (156)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence 4455554 5779999999999999999999998864
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=93.06 E-value=0.11 Score=38.86 Aligned_cols=78 Identities=13% Similarity=0.015 Sum_probs=56.0
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC-------------CCCeEEEEccCCCHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL-------------GIPAIGLEGDVRKRED 75 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~Dls~~~~ 75 (298)
...|.+||..|++.| ..+..|+++|++|+.++.+...++...+..++. +..+.++.+|..+...
T Consensus 18 ~~~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~ 94 (201)
T d1pjza_ 18 VVPGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTA 94 (201)
T ss_dssp CCTTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTH
T ss_pred CCCCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccccccc
Confidence 346889999999988 467799999999999999988887776666432 2345678888876543
Q ss_pred HHHHHHHHHHHhCCccEEEECCC
Q 022386 76 AVRVVESTINHFGKLDILVNAAA 98 (298)
Q Consensus 76 ~~~~~~~~~~~~~~id~li~~ag 98 (298)
... ...|.++....
T Consensus 95 ~~~---------~~~D~i~~~~~ 108 (201)
T d1pjza_ 95 RDI---------GHCAAFYDRAA 108 (201)
T ss_dssp HHH---------HSEEEEEEESC
T ss_pred ccc---------cceeEEEEEee
Confidence 221 25776665443
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=93.05 E-value=0.23 Score=34.39 Aligned_cols=34 Identities=21% Similarity=0.427 Sum_probs=29.2
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
+|.++|.|| |.+|.++|..|.++|.+|.++.+..
T Consensus 30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~ 63 (121)
T d1d7ya2 30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQP 63 (121)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCeEEEECc-chhHHHHHHHhhcccceEEEEeecc
Confidence 577777765 7899999999999999999998864
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.00 E-value=0.2 Score=34.74 Aligned_cols=34 Identities=21% Similarity=0.371 Sum_probs=29.0
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
.|.++|.|| |-||.++|..|.+.|.+|.++.++.
T Consensus 23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~ 56 (122)
T d1v59a2 23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP 56 (122)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence 367777765 6899999999999999999998864
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=92.98 E-value=0.089 Score=39.63 Aligned_cols=42 Identities=21% Similarity=0.301 Sum_probs=36.3
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~ 47 (298)
+....+.||++.|.| .|.||+++++.+...|.+|+..++...
T Consensus 37 ~~~~~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~ 78 (184)
T d1ygya1 37 FSGTEIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVS 78 (184)
T ss_dssp CCBCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred cccccccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCC
Confidence 345678999999998 688999999999999999999988754
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=92.97 E-value=0.5 Score=33.54 Aligned_cols=86 Identities=12% Similarity=0.016 Sum_probs=56.2
Q ss_pred CCcEEEEecCC---chhHHHHHHHHHHcCCcEEEEcCChhHHH--HHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 11 KGKVALLTGGG---SGIGFEISLQLGKHGAAIAIMGRRKTVLR--SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 11 ~gk~~lVtG~t---~giG~~ia~~l~~~G~~Vv~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
+.|++.|.|+| +..|..+++.|.+.|++|+.+..+..+.. .....+.+....++.+.. +...+.+..+++++.+
T Consensus 18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~~iD~v~i-~vp~~~~~~~~~e~~~ 96 (139)
T d2d59a1 18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDL-FVKPKLTMEYVEQAIK 96 (139)
T ss_dssp HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEE-CSCHHHHHHHHHHHHH
T ss_pred cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccCccceEEEE-EeCHHHHHHHHHHHHH
Confidence 46899999999 67999999999999999998866532111 111222332223333322 2346677777777776
Q ss_pred HhCCccEEEECCCC
Q 022386 86 HFGKLDILVNAAAG 99 (298)
Q Consensus 86 ~~~~id~li~~ag~ 99 (298)
. ++..++...|.
T Consensus 97 ~--g~k~v~~~~G~ 108 (139)
T d2d59a1 97 K--GAKVVWFQYNT 108 (139)
T ss_dssp H--TCSEEEECTTC
T ss_pred h--CCCEEEEeccc
Confidence 5 46677777774
|
| >d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: CheY-like family: CheY-related domain: CheY protein species: Thermotoga maritima [TaxId: 2336]
Probab=92.97 E-value=0.49 Score=32.35 Aligned_cols=82 Identities=15% Similarity=0.162 Sum_probs=58.4
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
||++||.--..-+-..+...|-+.|+.|+....+.. +..+.+.+...++.++..++-+.+. -.+++++++..+.+-
T Consensus 1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~---~al~~~~~~~~dliilD~~mp~~~G-~e~~~~ir~~~~~~p 76 (118)
T d1u0sy_ 1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGR---EAVEKYKELKPDIVTMDITMPEMNG-IDAIKEIMKIDPNAK 76 (118)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHH---HHHHHHHHHCCSEEEEECSCGGGCH-HHHHHHHHHHCTTCC
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHH---HHHHHHHhccCCEEEEecCCCCCCH-HHHHHHHHHhCCCCc
Confidence 789999999999999999999999999876655543 3444455555666666555555543 355666777777777
Q ss_pred EEEECC
Q 022386 92 ILVNAA 97 (298)
Q Consensus 92 ~li~~a 97 (298)
+++..+
T Consensus 77 vi~ls~ 82 (118)
T d1u0sy_ 77 IIVCSA 82 (118)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 776654
|
| >d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical methyltransferase PH1305 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=92.64 E-value=0.18 Score=39.35 Aligned_cols=73 Identities=19% Similarity=0.166 Sum_probs=57.9
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
+++++|=.|++.| .++..|+++|++|+.++-+...++...+.+...+.++.++..|+.+..- -+..
T Consensus 41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~~-----------~~~f 106 (251)
T d1wzna1 41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAF-----------KNEF 106 (251)
T ss_dssp CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCC-----------CSCE
T ss_pred CCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccccccchheehhhhhccc-----------cccc
Confidence 4678999999887 4566788999999999999888888877777778889999999876420 1478
Q ss_pred cEEEECC
Q 022386 91 DILVNAA 97 (298)
Q Consensus 91 d~li~~a 97 (298)
|.+++.-
T Consensus 107 D~I~~~~ 113 (251)
T d1wzna1 107 DAVTMFF 113 (251)
T ss_dssp EEEEECS
T ss_pred chHhhhh
Confidence 9877753
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=92.54 E-value=0.22 Score=34.25 Aligned_cols=34 Identities=21% Similarity=0.220 Sum_probs=29.0
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
.|.++|.|| |-+|.++|..|.+.|.+|.++.|..
T Consensus 22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~ 55 (117)
T d1onfa2 22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN 55 (117)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence 467777765 6789999999999999999998864
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.53 E-value=0.22 Score=34.66 Aligned_cols=34 Identities=24% Similarity=0.340 Sum_probs=29.4
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
.|.++|.||+ -+|.++|..|.+.|.+|.++.|..
T Consensus 22 pk~vvIvGgG-~iG~E~A~~l~~~G~~Vtlv~~~~ 55 (125)
T d3grsa2 22 PGRSVIVGAG-YIAVEMAGILSALGSKTSLMIRHD 55 (125)
T ss_dssp CSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCEEEEEcCC-ccHHHHHHHHhcCCcEEEEEeecc
Confidence 3678888775 699999999999999999998863
|
| >d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein TTHA1280, middle and C-terminal domains species: Thermus thermophilus [TaxId: 274]
Probab=92.50 E-value=0.51 Score=38.54 Aligned_cols=83 Identities=18% Similarity=0.171 Sum_probs=57.8
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCC-CeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
..+|++||=.++..| |.++ +++..|.+|+.++.+...++...+.+...+. ++.++..|..+. .+......
T Consensus 143 ~~~g~rVLDl~~gtG-~~s~--~~a~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~------~~~~~~~~ 213 (318)
T d1wxxa2 143 RFRGERALDVFSYAG-GFAL--HLALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDL------LRRLEKEG 213 (318)
T ss_dssp GCCEEEEEEETCTTT-HHHH--HHHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHH------HHHHHHTT
T ss_pred HhCCCeeeccCCCCc-HHHH--HHHhcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHH------hhhhHhhh
Confidence 357888887776655 3443 2445567899999999888888888777664 588888876532 22333344
Q ss_pred CCccEEEECCCCC
Q 022386 88 GKLDILVNAAAGN 100 (298)
Q Consensus 88 ~~id~li~~ag~~ 100 (298)
.+.|.+|.++...
T Consensus 214 ~~fD~Vi~DpP~~ 226 (318)
T d1wxxa2 214 ERFDLVVLDPPAF 226 (318)
T ss_dssp CCEEEEEECCCCS
T ss_pred cCCCEEEEcCCcc
Confidence 6899999998643
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=92.42 E-value=0.15 Score=38.18 Aligned_cols=39 Identities=23% Similarity=0.340 Sum_probs=34.5
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
...|.||++.|.|... ||+.+++.+...|.+|+..+++.
T Consensus 37 ~~~l~gk~vgIiG~G~-IG~~va~~l~~~g~~v~~~d~~~ 75 (181)
T d1qp8a1 37 IPLIQGEKVAVLGLGE-IGTRVGKILAALGAQVRGFSRTP 75 (181)
T ss_dssp CCCCTTCEEEEESCST-HHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCcccCceEEEecccc-ccccceeeeeccccccccccccc
Confidence 3468999999998765 99999999999999999999874
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=92.42 E-value=0.29 Score=33.94 Aligned_cols=36 Identities=17% Similarity=0.272 Sum_probs=30.1
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
-.+|.++|.| +|.+|.++|..|++.|.+|.++.+..
T Consensus 28 ~~~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~ 63 (123)
T d1nhpa2 28 PEVNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILD 63 (123)
T ss_dssp TTCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred cCCCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecC
Confidence 3467888875 56899999999999999999997753
|
| >d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Putative methyltransferase CAC2371 species: Clostridium acetobutylicum [TaxId: 1488]
Probab=92.39 E-value=0.11 Score=40.62 Aligned_cols=76 Identities=16% Similarity=0.055 Sum_probs=60.8
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
.+.++++|=.|++.|. ++..|+++|.+|+.++.+.+.++...+.+...+.++.++..|+.+.+ ..+
T Consensus 35 ~~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~-----------~~~ 100 (246)
T d1y8ca_ 35 NLVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN-----------INR 100 (246)
T ss_dssp TCCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC-----------CSC
T ss_pred CCCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccCccceeeccchhhhc-----------ccc
Confidence 4567899999999885 78889999999999999998888877777777788999999987542 124
Q ss_pred CccEEEECCC
Q 022386 89 KLDILVNAAA 98 (298)
Q Consensus 89 ~id~li~~ag 98 (298)
+.|++++..+
T Consensus 101 ~fD~i~~~~~ 110 (246)
T d1y8ca_ 101 KFDLITCCLD 110 (246)
T ss_dssp CEEEEEECTT
T ss_pred cccccceeee
Confidence 7998886543
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=91.99 E-value=0.12 Score=37.47 Aligned_cols=41 Identities=15% Similarity=0.093 Sum_probs=33.6
Q ss_pred EEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHH
Q 022386 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAAL 56 (298)
Q Consensus 15 ~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~ 56 (298)
+.|. |+|-+|.++++.|++.|+++++.+|+.++.+++.+.+
T Consensus 3 Ig~I-G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~ 43 (152)
T d2ahra2 3 IGII-GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL 43 (152)
T ss_dssp EEEE-CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred EEEE-eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence 3444 6789999999999999999999999987777665544
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=91.93 E-value=1.6 Score=31.78 Aligned_cols=121 Identities=16% Similarity=0.126 Sum_probs=65.6
Q ss_pred cEEEEecCCchhHHHHHHHHHHc-----CCcEEEEcCChhHHHHHHHHHHh----CCCCeEEEEccCCCHHHHHHHHHHH
Q 022386 13 KVALLTGGGSGIGFEISLQLGKH-----GAAIAIMGRRKTVLRSAVAALHS----LGIPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~-----G~~Vv~~~r~~~~~~~~~~~~~~----~~~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
..+.|.||++.....+...++.+ +.++++++.+.++++.....+.. .+........ +| .++.
T Consensus 4 ~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d---~~ea---- 74 (167)
T d1u8xx1 4 FSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--TD---PEEA---- 74 (167)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--SC---HHHH----
T ss_pred ceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec--CC---hhhc----
Confidence 35677777654333344444432 23799999998887755544433 2333333321 12 2222
Q ss_pred HHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhh----------------hHHHHHHHHHHHHHHHhcCCCCCCCCC
Q 022386 84 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID----------------SVGTFIMCHEALKYLKKGGRGQASSSS 147 (298)
Q Consensus 84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n----------------~~~~~~l~~~~~~~~~~~~~~~~~~~~ 147 (298)
+..-|++|+.+|.... +...-.+.+..| .....-+++.+.+.+.+...
T Consensus 75 ---l~~AD~Vvitag~~~~------~g~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~~P------- 138 (167)
T d1u8xx1 75 ---FTDVDFVMAHIRVGKY------AMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSP------- 138 (167)
T ss_dssp ---HSSCSEEEECCCTTHH------HHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCT-------
T ss_pred ---cCCCCEEEECCCcCCC------CceeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhhCC-------
Confidence 2479999999985321 112222233333 12344556777777776642
Q ss_pred CcEEEEecccc
Q 022386 148 GGIIINISATL 158 (298)
Q Consensus 148 ~g~iv~vss~~ 158 (298)
.+.++++|...
T Consensus 139 ~A~li~~TNPv 149 (167)
T d1u8xx1 139 DAWMLNYSNPA 149 (167)
T ss_dssp TCEEEECCSCH
T ss_pred CeEEEEeCCHH
Confidence 57787877643
|
| >d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ribosomal protein L11 methyltransferase PrmA domain: PrmA-like protein TTHA0656 (TT0836) species: Thermus thermophilus [TaxId: 274]
Probab=91.85 E-value=0.5 Score=37.28 Aligned_cols=75 Identities=28% Similarity=0.355 Sum_probs=57.0
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
...|+++|=.|+++|+ ++..+++.|++|+.++.+...++...+..+..+.++.++..|+.+ . -..+
T Consensus 118 ~~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d~~~------~-----~~~~ 183 (254)
T d2nxca1 118 LRPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA------A-----LPFG 183 (254)
T ss_dssp CCTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH------H-----GGGC
T ss_pred cCccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHcCCceeEEeccccc------c-----cccc
Confidence 4578999999999986 334567889999999999988888887777777778888776421 1 1236
Q ss_pred CccEEEECC
Q 022386 89 KLDILVNAA 97 (298)
Q Consensus 89 ~id~li~~a 97 (298)
+.|+++.|.
T Consensus 184 ~fD~V~ani 192 (254)
T d2nxca1 184 PFDLLVANL 192 (254)
T ss_dssp CEEEEEEEC
T ss_pred ccchhhhcc
Confidence 899998773
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=91.65 E-value=0.4 Score=32.90 Aligned_cols=34 Identities=18% Similarity=0.274 Sum_probs=28.7
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
.+.++|.|| |-||.++|..|++.|.+|.++.+..
T Consensus 22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~ 55 (119)
T d3lada2 22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD 55 (119)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence 467777765 7899999999999999999987753
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=91.52 E-value=0.11 Score=41.36 Aligned_cols=35 Identities=26% Similarity=0.404 Sum_probs=31.6
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEc
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMG 43 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~ 43 (298)
.+|+||+++|.| .|-+|..+++.|.+.|+.|+.++
T Consensus 32 ~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs 66 (255)
T d1bgva1 32 DTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS 66 (255)
T ss_dssp CCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence 478999999998 68899999999999999988764
|
| >d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Phosphopantothenoylcysteine synthetase species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.38 E-value=0.17 Score=40.95 Aligned_cols=25 Identities=12% Similarity=0.069 Sum_probs=21.6
Q ss_pred CchhHHHHHHHHHHcCCcEEEEcCC
Q 022386 21 GSGIGFEISLQLGKHGAAIAIMGRR 45 (298)
Q Consensus 21 t~giG~~ia~~l~~~G~~Vv~~~r~ 45 (298)
||..|.++|+.|..+|+.|+++.+.
T Consensus 45 SGk~G~alA~~~~~~Ga~V~li~g~ 69 (290)
T d1p9oa_ 45 SGRRGATSAEAFLAAGYGVLFLYRA 69 (290)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred chHHHHHHHHHHHHcCCEEEEEecC
Confidence 4679999999999999999988543
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=91.38 E-value=0.086 Score=41.97 Aligned_cols=33 Identities=21% Similarity=0.452 Sum_probs=28.6
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCC
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR 45 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~ 45 (298)
+|+|+|.||.-. |...|..|+++|++|+++.++
T Consensus 1 ~KkV~IIGaG~a-GL~aA~~La~~G~~V~vlE~~ 33 (373)
T d1seza1 1 AKRVAVIGAGVS-GLAAAYKLKIHGLNVTVFEAE 33 (373)
T ss_dssp CCEEEEECCSHH-HHHHHHHHHTTSCEEEEECSS
T ss_pred CCEEEEECcCHH-HHHHHHHHHhCCCCEEEEeCC
Confidence 688999987654 899999999999999999875
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=91.32 E-value=0.33 Score=36.41 Aligned_cols=39 Identities=13% Similarity=0.138 Sum_probs=34.6
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
..++.++++.|.| .|.||+++++.|...|.+|+..++..
T Consensus 39 ~~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~ 77 (188)
T d2naca1 39 AYDLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHR 77 (188)
T ss_dssp CCCCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred ceeccccceeecc-ccccchhhhhhhhccCceEEEEeecc
Confidence 4578999999998 57899999999999999999999864
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=91.10 E-value=0.56 Score=32.30 Aligned_cols=32 Identities=25% Similarity=0.311 Sum_probs=26.9
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCC
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR 45 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~ 45 (298)
+.++|.| +|-||.++|..|.+.|.+|.++.++
T Consensus 21 ~~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~ 52 (122)
T d1h6va2 21 GKTLVVG-ASYVALECAGFLAGIGLDVTVMVRS 52 (122)
T ss_dssp CSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEEC-CCccHHHHHHHHhhcCCeEEEEEec
Confidence 4566665 4789999999999999999998775
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=90.97 E-value=0.21 Score=37.97 Aligned_cols=40 Identities=18% Similarity=0.218 Sum_probs=35.0
Q ss_pred CCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh
Q 022386 7 GDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~ 47 (298)
...|.||++.|.| .|.||+.+|+.|...|++|+..++...
T Consensus 38 g~el~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~ 77 (197)
T d1j4aa1 38 GREVRDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRN 77 (197)
T ss_dssp BCCGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CccccCCeEEEec-ccccchhHHHhHhhhcccccccCcccc
Confidence 4579999999997 578999999999999999999987654
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=90.94 E-value=0.15 Score=38.49 Aligned_cols=39 Identities=18% Similarity=0.347 Sum_probs=31.7
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHH
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSA 52 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~ 52 (298)
+.+.|.|++. .|.++|..|++.|++|.+.+|+.+..+..
T Consensus 8 ~KI~ViGaG~-wGtAlA~~La~~g~~V~l~~r~~~~~~~i 46 (189)
T d1n1ea2 8 NKAVVFGSGA-FGTALAMVLSKKCREVCVWHMNEEEVRLV 46 (189)
T ss_dssp EEEEEECCSH-HHHHHHHHHHTTEEEEEEECSCHHHHHHH
T ss_pred ceEEEECCCH-HHHHHHHHHHHcCCeEEEEEecHHHHHHH
Confidence 4577887655 69999999999999999999997655443
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=90.92 E-value=0.13 Score=40.47 Aligned_cols=36 Identities=22% Similarity=0.297 Sum_probs=31.8
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcC
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR 44 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r 44 (298)
.+|+||+++|-| .|-+|..+|+.|.+.|++|+.++.
T Consensus 27 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD 62 (242)
T d1v9la1 27 GGIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSD 62 (242)
T ss_dssp SCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeec
Confidence 379999999996 788999999999999999887653
|
| >d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.81 E-value=0.19 Score=38.94 Aligned_cols=78 Identities=9% Similarity=0.002 Sum_probs=55.0
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHh------------------CCCCeEEEEccCC
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHS------------------LGIPAIGLEGDVR 71 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~------------------~~~~~~~~~~Dls 71 (298)
..+.+||..|++.| ..+..|+++|++|+.++-+...++...+.... .+.++.++.+|+.
T Consensus 44 ~~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 120 (229)
T d2bzga1 44 KSGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIF 120 (229)
T ss_dssp CCSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGG
T ss_pred CCCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchh
Confidence 36789999999988 45888999999999999998777665554322 1346788888876
Q ss_pred CHHHHHHHHHHHHHHhCCccEEEECCCC
Q 022386 72 KREDAVRVVESTINHFGKLDILVNAAAG 99 (298)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~id~li~~ag~ 99 (298)
+... ...+..|+++.....
T Consensus 121 ~l~~---------~~~~~fd~i~~~~~l 139 (229)
T d2bzga1 121 DLPR---------TNIGKFDMIWDRGAL 139 (229)
T ss_dssp GGGG---------SCCCCEEEEEESSST
T ss_pred hccc---------cccCceeEEEEEEEE
Confidence 4431 112467777665543
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=90.63 E-value=0.51 Score=32.04 Aligned_cols=34 Identities=26% Similarity=0.534 Sum_probs=28.5
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
.|.++|.| +|-+|.++|..|.+.|.+|.++.+..
T Consensus 21 p~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~ 54 (115)
T d1lvla2 21 PQHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARE 54 (115)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCeEEEEC-CCHHHHHHHHHHhhcccceEEEeeec
Confidence 46777775 57899999999999999999998863
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=90.47 E-value=0.75 Score=31.29 Aligned_cols=36 Identities=19% Similarity=0.324 Sum_probs=30.5
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
..+|.++|.|| |-+|.++|..|++.|..|.++.+..
T Consensus 20 ~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~ 55 (121)
T d1mo9a2 20 EPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTE 55 (121)
T ss_dssp CCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccc
Confidence 44788887765 6889999999999999999998864
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=90.47 E-value=0.35 Score=35.30 Aligned_cols=39 Identities=18% Similarity=0.273 Sum_probs=34.9
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~ 47 (298)
..|.||+++|.| -|-+|+.+|.+|...|++|+++..++-
T Consensus 19 ~~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi 57 (163)
T d1v8ba1 19 FLISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPI 57 (163)
T ss_dssp CCCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHH
T ss_pred ceecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCch
Confidence 468999999996 567999999999999999999999863
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=90.46 E-value=0.24 Score=37.46 Aligned_cols=41 Identities=12% Similarity=0.211 Sum_probs=35.5
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~ 47 (298)
....|.||++.|.| .|.||+.+|+.+...|++|+..++...
T Consensus 43 ~~~eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~ 83 (193)
T d1mx3a1 43 GAARIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLS 83 (193)
T ss_dssp TCCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred CceeeeCceEEEec-cccccccceeeeeccccceeeccCccc
Confidence 34679999999995 578999999999999999999988643
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=90.44 E-value=0.18 Score=39.15 Aligned_cols=34 Identities=26% Similarity=0.475 Sum_probs=28.4
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRR 45 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~ 45 (298)
..|.|+|.|| |-.|..+|..|+++|++|.++.|+
T Consensus 5 ~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~ 38 (268)
T d1c0pa1 5 SQKRVVVLGS-GVIGLSSALILARKGYSVHILARD 38 (268)
T ss_dssp CSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCC
Confidence 3457888876 456999999999999999999986
|
| >d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=90.33 E-value=0.59 Score=35.84 Aligned_cols=77 Identities=19% Similarity=0.202 Sum_probs=59.6
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCC-CCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
.|.+||..|+.+|---++..+|. |..|+.+.++.+-.+...+.+...+ .++.++..|..+- ....++
T Consensus 78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g----------~~~~~p 145 (215)
T d1jg1a_ 78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKG----------FPPKAP 145 (215)
T ss_dssp TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC----------CGGGCC
T ss_pred ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccC----------CcccCc
Confidence 47799999999998888888776 5679999999877777777777765 6789999987631 122368
Q ss_pred ccEEEECCCC
Q 022386 90 LDILVNAAAG 99 (298)
Q Consensus 90 id~li~~ag~ 99 (298)
.|.++.+++.
T Consensus 146 fD~Iiv~~a~ 155 (215)
T d1jg1a_ 146 YDVIIVTAGA 155 (215)
T ss_dssp EEEEEECSBB
T ss_pred ceeEEeeccc
Confidence 9999988875
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=90.17 E-value=0.21 Score=35.99 Aligned_cols=36 Identities=8% Similarity=0.069 Sum_probs=29.0
Q ss_pred EEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHH
Q 022386 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRS 51 (298)
Q Consensus 15 ~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~ 51 (298)
+-|. |.|-+|.++++.|+++|+.|++.+++......
T Consensus 3 IgiI-G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~ 38 (152)
T d1i36a2 3 VGFI-GFGEVAQTLASRLRSRGVEVVTSLEGRSPSTI 38 (152)
T ss_dssp EEEE-SCSHHHHHHHHHHHHTTCEEEECCTTCCHHHH
T ss_pred EEEE-cHHHHHHHHHHHHHHCCCeEEEEcCchhHHHH
Confidence 4455 56999999999999999999998877655443
|
| >d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical protein PH0226 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=90.07 E-value=0.69 Score=34.93 Aligned_cols=75 Identities=19% Similarity=0.084 Sum_probs=57.6
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCcc
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 91 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id 91 (298)
+.+||=.|++.|. ++..|++.|+.|+.++-+.+.++...+.....+..+.++..|..+.. -..+..|
T Consensus 38 ~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~----------~~~~~fD 104 (226)
T d1ve3a1 38 RGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLS----------FEDKTFD 104 (226)
T ss_dssp CCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCC----------SCTTCEE
T ss_pred CCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhcccccccccccccccccc----------ccCcCce
Confidence 4578999999885 66788899999999999988887777777777777888888877632 0114799
Q ss_pred EEEECCCC
Q 022386 92 ILVNAAAG 99 (298)
Q Consensus 92 ~li~~ag~ 99 (298)
+++....+
T Consensus 105 ~I~~~~~l 112 (226)
T d1ve3a1 105 YVIFIDSI 112 (226)
T ss_dssp EEEEESCG
T ss_pred EEEEecch
Confidence 88877653
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=89.88 E-value=0.24 Score=37.68 Aligned_cols=41 Identities=20% Similarity=0.167 Sum_probs=35.3
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
.....|.||++.|.|. |.||+.+++.|...|.+|+..++..
T Consensus 38 ~~~~~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~ 78 (199)
T d1dxya1 38 FIGKELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYP 78 (199)
T ss_dssp CCCCCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred cccccccceeeeeeec-ccccccccccccccceeeeccCCcc
Confidence 3456899999999975 6789999999999999999998864
|
| >d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=89.59 E-value=0.29 Score=38.19 Aligned_cols=35 Identities=14% Similarity=0.146 Sum_probs=29.9
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHH-cCCcEEEEc
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGK-HGAAIAIMG 43 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~-~G~~Vv~~~ 43 (298)
.+++|++++|-| .|-+|..+++.|.+ .|+.|+.++
T Consensus 27 ~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs 62 (234)
T d1b26a1 27 IDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS 62 (234)
T ss_dssp CCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred CCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence 478999999986 88999999999975 699988765
|
| >d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TehB-like domain: Putative methyltransferase TehB species: Salmonella typhimurium [TaxId: 90371]
Probab=89.56 E-value=1 Score=33.57 Aligned_cols=77 Identities=16% Similarity=0.185 Sum_probs=57.0
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCC-CeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
.+++..+|=.|++.|. .+..|+++|++|+.++-+...++...+.....+. .+.+...|+.+.. .+
T Consensus 28 ~~~~grvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~-----~~------ 93 (198)
T d2i6ga1 28 VVAPGRTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLT-----FD------ 93 (198)
T ss_dssp TSCSCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCC-----CC------
T ss_pred cCCCCcEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheeccccc-----cc------
Confidence 4566789999997653 5678899999999999998888877777666654 4777888877543 11
Q ss_pred CCccEEEECCCC
Q 022386 88 GKLDILVNAAAG 99 (298)
Q Consensus 88 ~~id~li~~ag~ 99 (298)
+..|+++.+.-+
T Consensus 94 ~~fD~I~~~~~~ 105 (198)
T d2i6ga1 94 GEYDFILSTVVM 105 (198)
T ss_dssp CCEEEEEEESCG
T ss_pred ccccEEEEeeee
Confidence 478988876653
|
| >d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=89.38 E-value=0.09 Score=35.69 Aligned_cols=40 Identities=15% Similarity=0.189 Sum_probs=32.8
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
+..+++||+|+|.|++. -|..+|..|++.+.++++..|+.
T Consensus 26 ~~~~f~gK~VlVVG~g~-Sa~dia~~l~~~ak~v~~~~~r~ 65 (107)
T d2gv8a2 26 EPELFVGESVLVVGGAS-SANDLVRHLTPVAKHPIYQSLLG 65 (107)
T ss_dssp CGGGGTTCCEEEECSSH-HHHHHHHHHTTTSCSSEEEECTT
T ss_pred chhhcCCCeEEEECCCC-CHHHHHHHHHHhcCEEEEEEecC
Confidence 34578999999999874 48899999999888877777764
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=89.38 E-value=1.5 Score=31.42 Aligned_cols=63 Identities=11% Similarity=0.051 Sum_probs=39.7
Q ss_pred cEEEEecCCchhHHHHHHHHHHc--CCcEEE--EcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHH
Q 022386 13 KVALLTGGGSGIGFEISLQLGKH--GAAIAI--MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVES 82 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~--G~~Vv~--~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~ 82 (298)
|++.|-|+||.||.....-..++ .++|+. +.++.+.+.+.+ .++.++..+ +.|++..+.+.+.
T Consensus 2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~---~~f~pk~v~----i~d~~~~~~l~~~ 68 (151)
T d1q0qa2 2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQC---LEFSPRYAV----MDDEASAKLLKTM 68 (151)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHH---HHHCCSEEE----ESSHHHHHHHHHH
T ss_pred CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHH---HHHhhcccc----cccHHHHHHHHHH
Confidence 67999999999999999988876 356665 345555444444 444454443 3444444444333
|
| >d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Precorrin-6Y methyltransferase (CbiT) domain: Precorrin-6Y methyltransferase (CbiT) species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=89.34 E-value=1.7 Score=31.93 Aligned_cols=75 Identities=23% Similarity=0.347 Sum_probs=55.0
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCC--CCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
.|.++|=.|+++| .++..|++.+.+|+.++.+.+.++...+.++..+ .++.++++|.. +......
T Consensus 33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~----------~~~~~~~ 99 (186)
T d1l3ia_ 33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAP----------EALCKIP 99 (186)
T ss_dssp TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHH----------HHHTTSC
T ss_pred CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchh----------hcccccC
Confidence 4778888888877 3345566778899999999998888888887765 57899988742 1122346
Q ss_pred CccEEEECCC
Q 022386 89 KLDILVNAAA 98 (298)
Q Consensus 89 ~id~li~~ag 98 (298)
.+|.++.+.+
T Consensus 100 ~~D~v~~~~~ 109 (186)
T d1l3ia_ 100 DIDIAVVGGS 109 (186)
T ss_dssp CEEEEEESCC
T ss_pred CcCEEEEeCc
Confidence 8998887653
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=89.08 E-value=0.27 Score=39.69 Aligned_cols=36 Identities=19% Similarity=0.234 Sum_probs=31.7
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcC
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGR 44 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r 44 (298)
.+|+||+++|-|- |-+|..+|+.|.+.|+.|+.++-
T Consensus 32 ~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD 67 (293)
T d1hwxa1 32 PGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGE 67 (293)
T ss_dssp SSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEc
Confidence 4799999999986 78999999999999999887653
|
| >d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 3, PRMT3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.75 E-value=0.73 Score=37.26 Aligned_cols=76 Identities=22% Similarity=0.316 Sum_probs=53.5
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhC--CCCeEEEEccCCCHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
..++||+||-.|++.|+ ++..++++|+ .|+.++.+... ....+..... ..++.++..|+.+...
T Consensus 32 ~~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~-~~a~~~~~~~~~~~~i~~~~~~~~~l~~--------- 98 (311)
T d2fyta1 32 HIFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEIL-YQAMDIIRLNKLEDTITLIKGKIEEVHL--------- 98 (311)
T ss_dssp GGTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHH-HHHHHHHHHTTCTTTEEEEESCTTTSCC---------
T ss_pred ccCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHH-HHHHHHHHHhCCCccceEEEeeHHHhcC---------
Confidence 45689999999999886 5667788898 68888877643 3344444443 4568999998876521
Q ss_pred HHhCCccEEEECC
Q 022386 85 NHFGKLDILVNAA 97 (298)
Q Consensus 85 ~~~~~id~li~~a 97 (298)
...++|+++...
T Consensus 99 -~~~~~D~Ivse~ 110 (311)
T d2fyta1 99 -PVEKVDVIISEW 110 (311)
T ss_dssp -SCSCEEEEEECC
T ss_pred -ccccceEEEEee
Confidence 124899998764
|
| >d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein PH1915, middle and C-terminal domains species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=88.67 E-value=1.9 Score=34.92 Aligned_cols=79 Identities=16% Similarity=0.125 Sum_probs=53.7
Q ss_pred CcEEEEecCCch-hHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCCC--CeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 12 GKVALLTGGGSG-IGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLGI--PAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 12 gk~~lVtG~t~g-iG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
|+++|=.++..| ++. .++..|+ .|+.++.+...++...+.+...+. ++.++..|+. .....+....
T Consensus 146 g~~VLDl~~g~G~~si----~~a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~------~~~~~~~~~~ 215 (324)
T d2as0a2 146 GDRVLDVFTYTGGFAI----HAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAF------EEMEKLQKKG 215 (324)
T ss_dssp TCEEEETTCTTTHHHH----HHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH------HHHHHHHHTT
T ss_pred CCeeecccCcccchhh----hhhhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhh------hhhHHHHhcc
Confidence 788887776644 333 3446677 699999998888777777766653 5778777654 2233333344
Q ss_pred CCccEEEECCCCC
Q 022386 88 GKLDILVNAAAGN 100 (298)
Q Consensus 88 ~~id~li~~ag~~ 100 (298)
.++|++|.++...
T Consensus 216 ~~fD~Vi~DpP~~ 228 (324)
T d2as0a2 216 EKFDIVVLDPPAF 228 (324)
T ss_dssp CCEEEEEECCCCS
T ss_pred CCCCchhcCCccc
Confidence 6899999998643
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=88.59 E-value=2.4 Score=28.62 Aligned_cols=83 Identities=12% Similarity=0.066 Sum_probs=51.4
Q ss_pred cEEEEecCC---chhHHHHHHHHHHcCCcEEEEcCChhHHHH--HHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHh
Q 022386 13 KVALLTGGG---SGIGFEISLQLGKHGAAIAIMGRRKTVLRS--AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF 87 (298)
Q Consensus 13 k~~lVtG~t---~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~ 87 (298)
|++.|.|+| +..|..+.+.|.+.|++|+.+..+.++... ....+.+....++.... ....+.+..+++++.+.
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~~lp~~~D~vvi-~vp~~~~~~~l~~~~~~- 79 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVF-VVPPKVGLQVAKEAVEA- 79 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEEE-CSCHHHHHHHHHHHHHT-
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccccCccccccchhccccceEEEE-EeCHHHHHHHHHHHHhc-
Confidence 789999999 568999999999999999888654321110 11222232233333221 23456677777776654
Q ss_pred CCccEEEECCC
Q 022386 88 GKLDILVNAAA 98 (298)
Q Consensus 88 ~~id~li~~ag 98 (298)
.+..++...|
T Consensus 80 -g~k~v~~~~g 89 (116)
T d1y81a1 80 -GFKKLWFQPG 89 (116)
T ss_dssp -TCCEEEECTT
T ss_pred -CCceEEeccc
Confidence 4556666555
|
| >d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=88.53 E-value=3.6 Score=30.54 Aligned_cols=144 Identities=15% Similarity=0.081 Sum_probs=75.1
Q ss_pred CCCCCcEEEEecC--CchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 8 DILKGKVALLTGG--GSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 8 ~~l~gk~~lVtG~--t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
....|+.++|... ......+++..|...|..++.+.-+.. .+.+ .+.+. ..
T Consensus 21 ~~~~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~-----------------------~~~~---~l~~~-~~ 73 (209)
T d2fr1a2 21 ARLDGTWLVAKYAGTADETSTAAREALESAGARVRELVVDAR-----------------------CGRD---ELAER-LR 73 (209)
T ss_dssp CCCCSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCTT-----------------------CCHH---HHHHH-HT
T ss_pred CCCCCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCCc-----------------------cCHH---HHHHH-hh
Confidence 3455665555533 344777788888888887776544321 1122 22222 23
Q ss_pred HhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCcEEEEecccccccCCCC
Q 022386 86 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY 165 (298)
Q Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~vss~~~~~~~~~ 165 (298)
..+.++.+|+..+........ .. . ....+...+.++|.+.. ... ..++.+++....... ..
T Consensus 74 ~~~~~~~vv~l~~~~~~~~~~-~~--~----~~~~~~~~l~l~qal~~---~~~--------~~~l~~vT~~a~~~~-~~ 134 (209)
T d2fr1a2 74 SVGEVAGVLSLLAVDEAEPEE-AP--L----ALASLADTLSLVQAMVS---AEL--------GCPLWTVTESAVATG-PF 134 (209)
T ss_dssp TSCCCSEEEECTTTTCCCCSS-CG--G----GCHHHHHHHHHHHHHHH---TTC--------CCCEEEEEESCSCSS-TT
T ss_pred ccCCCCeEEEeCCCCCCCCcc-hh--H----HHHHHHHHHHHHHHHHh---CCC--------CCcEEEEEcCCcccC-CC
Confidence 446889999987653222111 11 1 11123445555665532 211 244666654332221 11
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEE
Q 022386 166 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI 198 (298)
Q Consensus 166 ~~~Y~~sK~a~~~l~~~la~e~~~~~girv~~i 198 (298)
...-....+++.+|+|+++.|+. ...+++..+
T Consensus 135 d~~~~p~~A~l~Gl~r~~~~E~P-~l~~~~vDl 166 (209)
T d2fr1a2 135 ERVRNAAHGALWGVGRVIALENP-AVWGGLVDV 166 (209)
T ss_dssp SCCSCGGGHHHHHHHHHHHHHCG-GGEEEEEEE
T ss_pred cccCCHhHHhHHHHHHHHHHhCC-CceEEEEEC
Confidence 12223567899999999999986 323444444
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=88.47 E-value=0.19 Score=37.43 Aligned_cols=43 Identities=16% Similarity=0.329 Sum_probs=32.9
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL 59 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~ 59 (298)
.+.|.|+ |..|.++|..|++.|.+|.+.+|+.+ ++..+.++..
T Consensus 2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~--~~~~~~i~~~ 44 (180)
T d1txga2 2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFD--TEILKSISAG 44 (180)
T ss_dssp EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGG--HHHHHHHHTT
T ss_pred EEEEECC-CHHHHHHHHHHHHCCCEEEEEEeccc--HHHHHHHhhh
Confidence 4667765 77899999999999999999999654 2445556543
|
| >d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=88.43 E-value=0.97 Score=32.36 Aligned_cols=82 Identities=12% Similarity=0.079 Sum_probs=52.8
Q ss_pred EEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhC------CCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSL------GIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 15 ~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~------~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
+-+.|. |-+|..+|++|++.|+.+ +..|+.++..+..+..... -.+...+...+.+.+.+....+.+.....
T Consensus 3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~ 80 (156)
T d2cvza2 3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLR 80 (156)
T ss_dssp EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCC
T ss_pred EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccccc
Confidence 344544 889999999999988755 5777777666665554221 01233334456667778887777766555
Q ss_pred CccEEEECCC
Q 022386 89 KLDILVNAAA 98 (298)
Q Consensus 89 ~id~li~~ag 98 (298)
+-.++|.+..
T Consensus 81 ~~~~iid~sT 90 (156)
T d2cvza2 81 EGTYWVDATS 90 (156)
T ss_dssp TTEEEEECSC
T ss_pred cccccccccc
Confidence 5666666653
|
| >d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=88.33 E-value=0.4 Score=37.50 Aligned_cols=36 Identities=22% Similarity=0.439 Sum_probs=29.8
Q ss_pred CCCCCcEEEEecCCchhHHHHHHHHHH-cCCcEEEEcC
Q 022386 8 DILKGKVALLTGGGSGIGFEISLQLGK-HGAAIAIMGR 44 (298)
Q Consensus 8 ~~l~gk~~lVtG~t~giG~~ia~~l~~-~G~~Vv~~~r 44 (298)
.+|+||+++|-|- |.+|..+++.|++ .|+.|+.+..
T Consensus 28 ~~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vsD 64 (239)
T d1gtma1 28 DTLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVSD 64 (239)
T ss_dssp SCSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeeccc
Confidence 4699999999987 5599999999986 5988876643
|
| >d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Dethiobiotin synthetase species: Escherichia coli [TaxId: 562]
Probab=88.31 E-value=0.15 Score=38.70 Aligned_cols=31 Identities=19% Similarity=0.144 Sum_probs=27.5
Q ss_pred cEEEEecCCchhHH-----HHHHHHHHcCCcEEEEc
Q 022386 13 KVALLTGGGSGIGF-----EISLQLGKHGAAIAIMG 43 (298)
Q Consensus 13 k~~lVtG~t~giG~-----~ia~~l~~~G~~Vv~~~ 43 (298)
|.+.|||...|.|+ .+|..|+++|.+|.+++
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id 37 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK 37 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence 78999999999997 56788899999999986
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=88.17 E-value=0.71 Score=31.41 Aligned_cols=34 Identities=18% Similarity=0.207 Sum_probs=26.3
Q ss_pred CcEEEEecCCchhHHHHHHHHHHc---CCcEEEEcCCh
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKH---GAAIAIMGRRK 46 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~---G~~Vv~~~r~~ 46 (298)
++.++|.|| |.+|.++|..|.+. |.+|.++.+..
T Consensus 20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~ 56 (117)
T d1aoga2 20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE 56 (117)
T ss_dssp CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence 578888887 89999999777655 45688887753
|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: Amyloid beta precursor protein-binding protein 1, APPBP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.01 E-value=0.16 Score=44.91 Aligned_cols=35 Identities=23% Similarity=0.267 Sum_probs=29.5
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCC
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRR 45 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~ 45 (298)
|+..+|+|.|+ ||+|-++++.|+..|. ++.+++.+
T Consensus 23 L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d 58 (529)
T d1yova1 23 LESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGN 58 (529)
T ss_dssp HHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCS
T ss_pred HhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCC
Confidence 45678999986 7899999999999998 68888663
|
| >d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Putative methyltransferase SPy1538 species: Streptococcus pyogenes [TaxId: 1314]
Probab=87.98 E-value=3 Score=29.44 Aligned_cols=77 Identities=13% Similarity=0.170 Sum_probs=53.2
Q ss_pred CCCCcEEEEecCCch-hHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCC--CCeEEEEccCCCHHHHHHHHHHHH
Q 022386 9 ILKGKVALLTGGGSG-IGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 9 ~l~gk~~lVtG~t~g-iG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
.++|+.+|=.|+.+| +|. ..+.+|+ +|+.++.+....+...+.+...+ .++.+++.|..+ +++
T Consensus 12 ~~~g~~vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l~--- 78 (152)
T d2esra1 12 YFNGGRVLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AID--- 78 (152)
T ss_dssp CCCSCEEEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HHH---
T ss_pred hCCCCeEEEcCCccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------ccc---
Confidence 578999887776655 444 4567888 79999999887777777666554 358888887432 222
Q ss_pred HHhCCccEEEECCC
Q 022386 85 NHFGKLDILVNAAA 98 (298)
Q Consensus 85 ~~~~~id~li~~ag 98 (298)
...++.|+++.++.
T Consensus 79 ~~~~~fDiIf~DPP 92 (152)
T d2esra1 79 CLTGRFDLVFLDPP 92 (152)
T ss_dssp HBCSCEEEEEECCS
T ss_pred ccccccceeEechh
Confidence 22358999988764
|
| >d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein TT1466 species: Thermus thermophilus [TaxId: 274]
Probab=87.87 E-value=1.5 Score=30.70 Aligned_cols=85 Identities=16% Similarity=0.119 Sum_probs=48.9
Q ss_pred CCcEEEEecCC---chhHHHHHHHHHHcCCcEEEEcCChh--H--HHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHH
Q 022386 11 KGKVALLTGGG---SGIGFEISLQLGKHGAAIAIMGRRKT--V--LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVEST 83 (298)
Q Consensus 11 ~gk~~lVtG~t---~giG~~ia~~l~~~G~~Vv~~~r~~~--~--~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~ 83 (298)
+.|++.|.|+| +..|..+.+.|.+.|++++.+.-+.. . .......+.+....++.+.+ +...+.+..+++++
T Consensus 12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~~~i~g~~~~~~l~~i~~~iD~v~v-~~p~~~v~~~v~~~ 90 (136)
T d1iuka_ 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLDLKEPVDILDV-FRPPSALMDHLPEV 90 (136)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSEETTEECBSSGGGCCSCCSEEEE-CSCHHHHTTTHHHH
T ss_pred CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEeccccceeeceecccchhhccCCCceEEE-eccHHHHHHHHHHH
Confidence 56899999999 56999999999999999887744321 0 00011112222222333222 22355566666665
Q ss_pred HHHhCCccEEEECCC
Q 022386 84 INHFGKLDILVNAAA 98 (298)
Q Consensus 84 ~~~~~~id~li~~ag 98 (298)
.+. .+..++...|
T Consensus 91 ~~~--g~k~i~~q~G 103 (136)
T d1iuka_ 91 LAL--RPGLVWLQSG 103 (136)
T ss_dssp HHH--CCSCEEECTT
T ss_pred Hhh--CCCeEEEecC
Confidence 554 3445555555
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=87.83 E-value=0.68 Score=32.06 Aligned_cols=34 Identities=21% Similarity=0.347 Sum_probs=28.8
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
.+.++|.|| |-||.++|..|.+.|.+|.++.+..
T Consensus 26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~ 59 (125)
T d1ojta2 26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD 59 (125)
T ss_dssp CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence 467777765 7899999999999999999997753
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=87.77 E-value=0.29 Score=36.53 Aligned_cols=37 Identities=14% Similarity=0.368 Sum_probs=31.7
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
.-++|.++|.||. --|.+.|..|+++|++|.++.+..
T Consensus 40 ~~~~k~V~IIGaG-PAGL~AA~~la~~G~~Vtl~E~~~ 76 (179)
T d1ps9a3 40 AVQKKNLAVVGAG-PAGLAFAINAAARGHQVTLFDAHS 76 (179)
T ss_dssp CSSCCEEEEECCS-HHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCCcEEEEECcc-HHHHHHHHHHHhhccceEEEeccC
Confidence 4567899999875 459999999999999999998864
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=87.52 E-value=0.27 Score=39.57 Aligned_cols=35 Identities=17% Similarity=0.410 Sum_probs=30.0
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
+.|.|+|.||.-. |...|..|+++|++|+++.++.
T Consensus 29 ~pkkV~IIGaG~a-GLsaA~~L~~~G~~V~vlE~~~ 63 (370)
T d2iida1 29 NPKHVVIVGAGMA-GLSAAYVLAGAGHQVTVLEASE 63 (370)
T ss_dssp SCCEEEEECCBHH-HHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCeEEEECCCHH-HHHHHHHHHHCCCCEEEEeCCC
Confidence 4678999988755 9999999999999999998764
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=87.34 E-value=0.52 Score=35.59 Aligned_cols=36 Identities=14% Similarity=0.039 Sum_probs=30.1
Q ss_pred EEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHH
Q 022386 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRS 51 (298)
Q Consensus 15 ~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~ 51 (298)
+.|. |.|-+|..+|..|+++|++|+.++.+.+..+.
T Consensus 3 I~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ 38 (202)
T d1mv8a2 3 ISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDL 38 (202)
T ss_dssp EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred EEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHH
Confidence 4555 78899999999999999999999998765443
|
| >d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein SMu776, middle and C-terminal domains species: Streptococcus mutans [TaxId: 1309]
Probab=87.08 E-value=6.3 Score=31.63 Aligned_cols=80 Identities=16% Similarity=0.040 Sum_probs=53.8
Q ss_pred CCcEEEEecCC-chhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhCC---CCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 11 KGKVALLTGGG-SGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 11 ~gk~~lVtG~t-~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
+|+++|=..+. |+++. +.+..|+ .|+.++.+...++-..+.+...+ .++.+++.|.. .+++....
T Consensus 144 ~g~~VLdlf~~~G~~sl----~aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~------~~l~~~~~ 213 (317)
T d2b78a2 144 AGKTVLNLFSYTAAFSV----AAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF------DYFKYARR 213 (317)
T ss_dssp BTCEEEEETCTTTHHHH----HHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH------HHHHHHHH
T ss_pred CCCceeecCCCCcHHHH----HHHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH------HHHHHHHh
Confidence 47888766555 44443 3445788 58999999887777777665543 35888988763 33344444
Q ss_pred HhCCccEEEECCCCC
Q 022386 86 HFGKLDILVNAAAGN 100 (298)
Q Consensus 86 ~~~~id~li~~ag~~ 100 (298)
...+.|++|..+-..
T Consensus 214 ~~~~fD~Ii~DPP~f 228 (317)
T d2b78a2 214 HHLTYDIIIIDPPSF 228 (317)
T ss_dssp TTCCEEEEEECCCCC
T ss_pred hcCCCCEEEEcChhh
Confidence 556899999997643
|
| >d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=87.00 E-value=1.4 Score=33.47 Aligned_cols=79 Identities=19% Similarity=0.226 Sum_probs=56.4
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCC-CCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
.|.+||-.|+.+|--.++..++...+..|+.++.+.+..+...+.+...+ .++.++..|..+.- ...+.
T Consensus 75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~----------~~~~~ 144 (213)
T d1dl5a1 75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV----------PEFSP 144 (213)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC----------GGGCC
T ss_pred ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHcc----------ccccc
Confidence 37799999998887666555555556689999999888888877777654 45777777755311 12257
Q ss_pred ccEEEECCCC
Q 022386 90 LDILVNAAAG 99 (298)
Q Consensus 90 id~li~~ag~ 99 (298)
.|.++.+++.
T Consensus 145 fD~I~~~~~~ 154 (213)
T d1dl5a1 145 YDVIFVTVGV 154 (213)
T ss_dssp EEEEEECSBB
T ss_pred hhhhhhhccH
Confidence 9999988864
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=86.98 E-value=0.57 Score=35.02 Aligned_cols=40 Identities=15% Similarity=0.126 Sum_probs=34.4
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
....+.++++.|. |.|.||+.+++.+...|.+|+..++..
T Consensus 38 ~~~~l~~~~vgii-G~G~IG~~va~~l~~fg~~v~~~d~~~ 77 (188)
T d1sc6a1 38 GSFEARGKKLGII-GYGHIGTQLGILAESLGMYVYFYDIEN 77 (188)
T ss_dssp -CCCSTTCEEEEE-CCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred ccccccceEEEEe-ecccchhhhhhhcccccceEeeccccc
Confidence 3457899999999 578899999999999999999998864
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=86.90 E-value=1.1 Score=31.30 Aligned_cols=35 Identities=17% Similarity=0.315 Sum_probs=29.9
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
.+|.++|.| +|-+|.++|..|.+.|.+|.++.+..
T Consensus 34 ~~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~ 68 (133)
T d1q1ra2 34 ADNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAA 68 (133)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred cCCEEEEEC-CchHHHHHHHHHHhhCcceeeeeecc
Confidence 467888885 57899999999999999999998864
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=86.44 E-value=0.82 Score=34.25 Aligned_cols=42 Identities=17% Similarity=0.228 Sum_probs=35.5
Q ss_pred CCCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChh
Q 022386 5 FKGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKT 47 (298)
Q Consensus 5 ~~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~ 47 (298)
+....+.||++.|.|. |.||+.+++.+...|.+|+..++...
T Consensus 40 ~~~~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~ 81 (191)
T d1gdha1 40 LVGEKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRA 81 (191)
T ss_dssp TCBCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred cccceecccceEEeec-ccchHHHHHHHHhhcccccccccccc
Confidence 3456888999999975 78999999999999999999987643
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=86.07 E-value=0.33 Score=36.01 Aligned_cols=34 Identities=18% Similarity=0.249 Sum_probs=28.1
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCCh
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRK 46 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~ 46 (298)
+|.|+|.|| |-.|...|..|+++|+ .|.++.++.
T Consensus 4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~ 38 (196)
T d1gtea4 4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQE 38 (196)
T ss_dssp GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecC
Confidence 677888876 5669999999999999 488988864
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=86.01 E-value=1.1 Score=32.13 Aligned_cols=53 Identities=9% Similarity=0.117 Sum_probs=37.0
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHc--CCcEEEE--cCChhHHHHHHHHHHhCCCCeEEE
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKH--GAAIAIM--GRRKTVLRSAVAALHSLGIPAIGL 66 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~--G~~Vv~~--~r~~~~~~~~~~~~~~~~~~~~~~ 66 (298)
+.|++.|.|+||.||.....-+.+. .++|+.+ .++.+ .+.+.+.++.++..++
T Consensus 1 ~pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~---~L~~q~~ef~Pk~v~i 57 (150)
T d1r0ka2 1 QPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVK---DLADAAKRTNAKRAVI 57 (150)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHH---HHHHHHHHTTCSEEEE
T ss_pred CCcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHH---HHHHHHHhhcccccee
Confidence 3589999999999999999998775 4566653 44444 4455555556655543
|
| >d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N5-glutamine methyltransferase, HemK domain: N5-glutamine methyltransferase, HemK species: Thermotoga maritima [TaxId: 2336]
Probab=85.93 E-value=2.8 Score=33.06 Aligned_cols=77 Identities=16% Similarity=0.179 Sum_probs=51.6
Q ss_pred cEEEEecCCch-hHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCC--CCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 13 KVALLTGGGSG-IGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 13 k~~lVtG~t~g-iG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
++++-.|+++| |+.+++ + ...+.|++++.+...++-..+-....+ .++.+...|+.+. ....+++
T Consensus 112 ~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~~~ 179 (271)
T d1nv8a_ 112 KTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------FKEKFAS 179 (271)
T ss_dssp CEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGTTT
T ss_pred cEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc---------cccccCc
Confidence 45565555555 555544 2 246789999999887777777666654 3567778888643 2334579
Q ss_pred ccEEEECCCCCC
Q 022386 90 LDILVNAAAGNF 101 (298)
Q Consensus 90 id~li~~ag~~~ 101 (298)
+|++|.|.-..+
T Consensus 180 fDlIVsNPPYI~ 191 (271)
T d1nv8a_ 180 IEMILSNPPYVK 191 (271)
T ss_dssp CCEEEECCCCBC
T ss_pred ccEEEEcccccC
Confidence 999999997543
|
| >d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Cell division regulator MinD species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=85.58 E-value=0.34 Score=37.12 Aligned_cols=34 Identities=24% Similarity=0.532 Sum_probs=29.7
Q ss_pred CcEEEEecCCchhHH-----HHHHHHHHcCCcEEEEcCC
Q 022386 12 GKVALLTGGGSGIGF-----EISLQLGKHGAAIAIMGRR 45 (298)
Q Consensus 12 gk~~lVtG~t~giG~-----~ia~~l~~~G~~Vv~~~r~ 45 (298)
||++.|+|+-||.|+ ++|..|+++|.+|.+++-+
T Consensus 2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D 40 (237)
T d1g3qa_ 2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD 40 (237)
T ss_dssp CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 789999999999987 5678888999999999865
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=85.56 E-value=0.5 Score=36.64 Aligned_cols=35 Identities=20% Similarity=0.354 Sum_probs=28.5
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
..+.|+|.||.= -|..+|..|+++|.+|+++.++.
T Consensus 3 ~~~kV~IiGaG~-aGl~~A~~L~~~G~~v~v~Er~~ 37 (265)
T d2voua1 3 TTDRIAVVGGSI-SGLTAALMLRDAGVDVDVYERSP 37 (265)
T ss_dssp CCSEEEEECCSH-HHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCcEEEECcCH-HHHHHHHHHHHCCCCEEEEeCCC
Confidence 356788888754 48888999999999999998864
|
| >d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Methyltransferase TTHA0928 species: Thermus thermophilus [TaxId: 274]
Probab=85.44 E-value=3.7 Score=29.65 Aligned_cols=78 Identities=15% Similarity=0.149 Sum_probs=48.3
Q ss_pred CCcEEEEecCCch-hHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Q 022386 11 KGKVALLTGGGSG-IGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK 89 (298)
Q Consensus 11 ~gk~~lVtG~t~g-iG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~ 89 (298)
+|+++|=.|+.+| +| -..+++|+.|+.++.+....+.+.+.++..+........| .+. +.........+
T Consensus 41 ~g~~vLDl~~G~G~~~----i~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~---~d~---~~~~~~~~~~~ 110 (171)
T d1ws6a1 41 RRGRFLDPFAGSGAVG----LEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALP---VEV---FLPEAKAQGER 110 (171)
T ss_dssp TCCEEEEETCSSCHHH----HHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSC---HHH---HHHHHHHTTCC
T ss_pred CCCeEEEeccccchhh----hhhhhccchhhhcccCHHHHhhhhHHHHhhccccceeeee---hhc---ccccccccCCc
Confidence 5666665555544 44 3566789999999999888777777776655444333222 222 22223333458
Q ss_pred ccEEEECCC
Q 022386 90 LDILVNAAA 98 (298)
Q Consensus 90 id~li~~ag 98 (298)
.|+++.+.-
T Consensus 111 fD~If~DPP 119 (171)
T d1ws6a1 111 FTVAFMAPP 119 (171)
T ss_dssp EEEEEECCC
T ss_pred cceeEEccc
Confidence 999998864
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=85.37 E-value=0.49 Score=34.22 Aligned_cols=35 Identities=14% Similarity=0.338 Sum_probs=28.7
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCC--cEEEEcCCh
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGA--AIAIMGRRK 46 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~--~Vv~~~r~~ 46 (298)
+||+++|.||+- .|..+|..|.++|. +|+++.++.
T Consensus 1 ~gkrivIvGgG~-~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 1 AGRKVVVVGGGT-GGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCCEEEEECCSH-HHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCCcEEEECccH-HHHHHHHHHHHcCCCCcEEEEECCC
Confidence 589999998864 49999999999885 678887653
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=85.36 E-value=3.3 Score=26.85 Aligned_cols=75 Identities=21% Similarity=0.212 Sum_probs=46.6
Q ss_pred CCCCCCcEEEEecCCchhH-HHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 7 GDILKGKVALLTGGGSGIG-FEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 7 ~~~l~gk~~lVtG~t~giG-~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
++.-+.|.+.+.|-. |+| .++|+.|.++|+.|...++.... ..+.+.+.+..+ ...+-. +
T Consensus 3 ~~~~~~~~ihfiGig-G~GMs~LA~~L~~~G~~VsGSD~~~~~---~~~~L~~~Gi~v--~~g~~~--~----------- 63 (96)
T d1p3da1 3 PEMRRVQQIHFIGIG-GAGMSGIAEILLNEGYQISGSDIADGV---VTQRLAQAGAKI--YIGHAE--E----------- 63 (96)
T ss_dssp CCCTTCCEEEEETTT-STTHHHHHHHHHHHTCEEEEEESCCSH---HHHHHHHTTCEE--EESCCG--G-----------
T ss_pred ccchhCCEEEEEEEC-HHHHHHHHHHHHhCCCEEEEEeCCCCh---hhhHHHHCCCeE--EECCcc--c-----------
Confidence 344456777777654 344 55799999999999999987542 223444555433 222211 1
Q ss_pred HhCCccEEEECCCCC
Q 022386 86 HFGKLDILVNAAAGN 100 (298)
Q Consensus 86 ~~~~id~li~~ag~~ 100 (298)
.....|.+|...++.
T Consensus 64 ~i~~~d~vV~S~AI~ 78 (96)
T d1p3da1 64 HIEGASVVVVSSAIK 78 (96)
T ss_dssp GGTTCSEEEECTTSC
T ss_pred cCCCCCEEEECCCcC
Confidence 113678999998864
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=84.98 E-value=0.84 Score=31.26 Aligned_cols=34 Identities=26% Similarity=0.472 Sum_probs=28.3
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
+|.++|.|| |.+|.++|..|.++|.+|.++.+..
T Consensus 32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~ 65 (122)
T d1xhca2 32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA 65 (122)
T ss_dssp HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence 356777654 7899999999999999999998864
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=84.89 E-value=1.1 Score=30.36 Aligned_cols=33 Identities=18% Similarity=0.220 Sum_probs=27.9
Q ss_pred cEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 13 KVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 13 k~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
|.++|.| +|-+|.++|..|.+.|.+|.++.+..
T Consensus 22 ~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~ 54 (116)
T d1gesa2 22 ERVAVVG-AGYIGVELGGVINGLGAKTHLFEMFD 54 (116)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CEEEEEC-CChhhHHHHHHhhccccEEEEEeecc
Confidence 5666665 47889999999999999999998864
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=84.87 E-value=0.42 Score=36.29 Aligned_cols=31 Identities=13% Similarity=0.161 Sum_probs=26.1
Q ss_pred EEEecCCchhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 15 ~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
|+|.|| |--|..+|..|+++|.+|.++.++.
T Consensus 8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~ 38 (297)
T d2bcgg1 8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD 38 (297)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 677775 4559999999999999999998864
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=84.64 E-value=0.54 Score=36.21 Aligned_cols=36 Identities=19% Similarity=0.316 Sum_probs=30.8
Q ss_pred CCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 10 LKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 10 l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
-.+|.++|.||+-. |...|..|+++|++|.++.++.
T Consensus 47 ~~~k~VvIIGaGpA-Gl~aA~~l~~~G~~v~l~E~~~ 82 (233)
T d1djqa3 47 KNKDSVLIVGAGPS-GSEAARVLMESGYTVHLTDTAE 82 (233)
T ss_dssp SSCCEEEEECCSHH-HHHHHHHHHHTTCEEEEECSSS
T ss_pred cCCceEEEEcccHH-HHHHHHHHHHhccceeeEeecc
Confidence 46789999988654 8999999999999999998764
|
| >d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Arsenite-translocating ATPase ArsA species: Escherichia coli [TaxId: 562]
Probab=84.42 E-value=0.43 Score=37.77 Aligned_cols=37 Identities=14% Similarity=0.273 Sum_probs=31.1
Q ss_pred CCcEEEEecCCchhHHHH-----HHHHHHcCCcEEEEcCChh
Q 022386 11 KGKVALLTGGGSGIGFEI-----SLQLGKHGAAIAIMGRRKT 47 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~i-----a~~l~~~G~~Vv~~~r~~~ 47 (298)
.++.++|+.|-||.|+-. |..|+++|.+|.+++-+..
T Consensus 18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~ 59 (279)
T d1ihua2 18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA 59 (279)
T ss_dssp TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 367777887799999976 7899999999999998853
|
| >d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: CheY-like family: CheY-related domain: NTRC receiver domain species: Salmonella typhimurium [TaxId: 90371]
Probab=84.12 E-value=4.5 Score=27.30 Aligned_cols=82 Identities=12% Similarity=0.136 Sum_probs=55.4
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
+..++||.--...+...+...|.+.|++|..+.... +..+.+.+...++......+-+.+.+ .+++++++.++.+
T Consensus 2 ~k~~ILIVDDd~~~~~~l~~~L~~~g~~v~~a~~~~----~a~~~l~~~~~dlii~D~~mp~~~G~-el~~~l~~~~~~~ 76 (123)
T d1krwa_ 2 QRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGN----EVLAALASKTPDVLLSDIRMPGMDGL-ALLKQIKQRHPML 76 (123)
T ss_dssp CCCEEEEESSSHHHHHHHHHHHHHTTCEEEEESSSH----HHHHHHTTCCCSEEEECCSSSSSTTH-HHHHHHHHHSSSC
T ss_pred CCCEEEEEECCHHHHHHHHHHHHHCCCEEEEeCCHH----HHHHHHHhCCCCEEEehhhcCCchHH-HHHHHHHHhCCCC
Confidence 445799999999999999999999999998766554 34445555555555544434344333 3566777777777
Q ss_pred cEEEECC
Q 022386 91 DILVNAA 97 (298)
Q Consensus 91 d~li~~a 97 (298)
-+++..+
T Consensus 77 piI~~t~ 83 (123)
T d1krwa_ 77 PVIIMTA 83 (123)
T ss_dssp CEEESCC
T ss_pred eEEEEec
Confidence 6666555
|
| >d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Sulfolobus tokodaii [TaxId: 111955]
Probab=84.09 E-value=1.7 Score=33.30 Aligned_cols=75 Identities=17% Similarity=0.055 Sum_probs=52.2
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCc
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKL 90 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~i 90 (298)
.|.++|-.|+++|---+ .|++.+.+|+.+..+.+..+...+.+. ...++.++..|..+- ....++.
T Consensus 70 ~g~~VLdIG~GsGy~ta---~La~l~~~V~aiE~~~~~~~~A~~~~~-~~~nv~~~~~d~~~g----------~~~~~pf 135 (224)
T d1vbfa_ 70 KGQKVLEIGTGIGYYTA---LIAEIVDKVVSVEINEKMYNYASKLLS-YYNNIKLILGDGTLG----------YEEEKPY 135 (224)
T ss_dssp TTCEEEEECCTTSHHHH---HHHHHSSEEEEEESCHHHHHHHHHHHT-TCSSEEEEESCGGGC----------CGGGCCE
T ss_pred ccceEEEecCCCCHHHH---HHHHHhcccccccccHHHHHHHHHHHh-cccccccccCchhhc----------chhhhhH
Confidence 37789999999885443 456667789999998776655544443 346788888887541 0123679
Q ss_pred cEEEECCCC
Q 022386 91 DILVNAAAG 99 (298)
Q Consensus 91 d~li~~ag~ 99 (298)
|.++.+++.
T Consensus 136 D~Iiv~~a~ 144 (224)
T d1vbfa_ 136 DRVVVWATA 144 (224)
T ss_dssp EEEEESSBB
T ss_pred HHHHhhcch
Confidence 999888764
|
| >d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein BH2331 species: Bacillus halodurans [TaxId: 86665]
Probab=83.86 E-value=2.2 Score=32.14 Aligned_cols=78 Identities=17% Similarity=0.161 Sum_probs=56.0
Q ss_pred CCC-CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCC-CCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 9 ILK-GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 9 ~l~-gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
.++ +++||=.|++.|.- +..|+++|++|+.++-+.+.++...+.+...+ .++.++.+|..+.. . .
T Consensus 12 ~l~~~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~-~---------~ 78 (231)
T d1vl5a_ 12 ALKGNEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP-F---------T 78 (231)
T ss_dssp TCCSCCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC-S---------C
T ss_pred CCCCcCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhccccccccccccccccccccc-c---------c
Confidence 344 57899999988843 46678889999999999887777666665544 56889999887642 1 1
Q ss_pred hCCccEEEECCCC
Q 022386 87 FGKLDILVNAAAG 99 (298)
Q Consensus 87 ~~~id~li~~ag~ 99 (298)
.+..|+++.+..+
T Consensus 79 ~~~fD~v~~~~~l 91 (231)
T d1vl5a_ 79 DERFHIVTCRIAA 91 (231)
T ss_dssp TTCEEEEEEESCG
T ss_pred ccccccccccccc
Confidence 1579988877664
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=83.76 E-value=1.8 Score=29.51 Aligned_cols=34 Identities=21% Similarity=0.381 Sum_probs=29.2
Q ss_pred CcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 12 GKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 12 gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
.|.++|.|| |-||.++|..|.+.|.+|.++.|+.
T Consensus 25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~ 58 (123)
T d1dxla2 25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFAS 58 (123)
T ss_dssp CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcc
Confidence 467777765 7899999999999999999998864
|
| >d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.39 E-value=2 Score=32.76 Aligned_cols=79 Identities=20% Similarity=0.132 Sum_probs=59.0
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCC------CCeEEEEccCCCHHHHHHHHHHHH
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG------IPAIGLEGDVRKREDAVRVVESTI 84 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~------~~~~~~~~Dls~~~~~~~~~~~~~ 84 (298)
.|.+||-.|+.+|---++..++.....+|+.++++.+..+...+.+...+ ..+.+...|..+. .
T Consensus 76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~----------~ 145 (224)
T d1i1na_ 76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG----------Y 145 (224)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC----------C
T ss_pred CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeecccc----------c
Confidence 47899999999998888888888777899999999887777766665432 4577777776421 1
Q ss_pred HHhCCccEEEECCCC
Q 022386 85 NHFGKLDILVNAAAG 99 (298)
Q Consensus 85 ~~~~~id~li~~ag~ 99 (298)
...+..|.++.+++.
T Consensus 146 ~~~~~fD~I~~~~~~ 160 (224)
T d1i1na_ 146 AEEAPYDAIHVGAAA 160 (224)
T ss_dssp GGGCCEEEEEECSBB
T ss_pred chhhhhhhhhhhcch
Confidence 123579999988874
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=83.05 E-value=1.5 Score=28.30 Aligned_cols=67 Identities=22% Similarity=0.303 Sum_probs=44.9
Q ss_pred EEEecCCchhHH-HHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEE
Q 022386 15 ALLTGGGSGIGF-EISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDIL 93 (298)
Q Consensus 15 ~lVtG~t~giG~-~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~l 93 (298)
+-+. |-+|+|. ++|+.|.++|+.|...|+... +..+.+.+.|.++.. .-|..+ ....|.+
T Consensus 4 ihfi-GIgG~GMs~LA~~L~~~G~~VsGSD~~~~---~~t~~L~~~Gi~i~~-gh~~~~--------------i~~~d~v 64 (89)
T d1j6ua1 4 IHFV-GIGGIGMSAVALHEFSNGNDVYGSNIEET---ERTAYLRKLGIPIFV-PHSADN--------------WYDPDLV 64 (89)
T ss_dssp EEEE-TTTSHHHHHHHHHHHHTTCEEEEECSSCC---HHHHHHHHTTCCEES-SCCTTS--------------CCCCSEE
T ss_pred EEEE-eECHHHHHHHHHHHHhCCCeEEEEeCCCC---hhHHHHHHCCCeEEe-eecccc--------------cCCCCEE
Confidence 4444 4567777 789999999999999998854 333457777755532 122222 1368999
Q ss_pred EECCCCC
Q 022386 94 VNAAAGN 100 (298)
Q Consensus 94 i~~ag~~ 100 (298)
|...++.
T Consensus 65 V~SsAI~ 71 (89)
T d1j6ua1 65 IKTPAVR 71 (89)
T ss_dssp EECTTCC
T ss_pred EEecCcC
Confidence 9999864
|
| >d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Tandem AAA-ATPase domain domain: Nucleotide excision repair enzyme UvrB species: Thermus thermophilus [TaxId: 274]
Probab=82.68 E-value=6.9 Score=28.41 Aligned_cols=63 Identities=16% Similarity=0.118 Sum_probs=51.0
Q ss_pred HHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhCCccEEEECCC
Q 022386 33 GKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA 98 (298)
Q Consensus 33 ~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~li~~ag 98 (298)
.+.|-+++++..+....+.+.+.+.+.|-++..++.++.+.+ -++.++...+ |.+++||...-
T Consensus 28 ~~~g~r~lvfc~t~~~~~~l~~~L~~~Gi~a~~~Hg~~~~~e-R~~~l~~F~~--G~~~vLVaT~v 90 (174)
T d1c4oa2 28 AARGERTLVTVLTVRMAEELTSFLVEHGIRARYLHHELDAFK-RQALIRDLRL--GHYDCLVGINL 90 (174)
T ss_dssp HHTTCEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTCCHHH-HHHHHHHHHT--TSCSEEEESCC
T ss_pred HhcCCcEEEEEcchhHHHHHHHHHHhcCCceEEEecccchHH-HHHHHHHHHC--CCeEEEEeeee
Confidence 356889999999999999999999999999999999998653 4444555443 79999998764
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=82.64 E-value=0.62 Score=37.79 Aligned_cols=35 Identities=34% Similarity=0.525 Sum_probs=28.9
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 11 KGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 11 ~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
+.|.++|.||+= -|..+|..|+++|.+|.++.++.
T Consensus 1 k~KKI~IIGaG~-sGL~aA~~L~k~G~~V~viEk~~ 35 (314)
T d2bi7a1 1 KSKKILIVGAGF-SGAVIGRQLAEKGHQVHIIDQRD 35 (314)
T ss_dssp CCCEEEEECCSH-HHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCEEEEECCcH-HHHHHHHHHHhCCCCEEEEECCC
Confidence 357888888764 48889999999999999998764
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=82.59 E-value=1.4 Score=30.53 Aligned_cols=88 Identities=9% Similarity=0.017 Sum_probs=54.5
Q ss_pred CCCCcEEEEecCC---chhHHHHHHHHHHcC-CcEEEEcCChhHHH--HHHHHHHhCCCCeEEEEccCCCHHHHHHHHHH
Q 022386 9 ILKGKVALLTGGG---SGIGFEISLQLGKHG-AAIAIMGRRKTVLR--SAVAALHSLGIPAIGLEGDVRKREDAVRVVES 82 (298)
Q Consensus 9 ~l~gk~~lVtG~t---~giG~~ia~~l~~~G-~~Vv~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~ 82 (298)
-|+.|++.|.|+| +..|..+.+.|.+.| .+|+.+..+.++.. .....+.+....++...+ ....+.+..++++
T Consensus 5 lf~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~G~~~y~sl~dlp~~vDlvvi-~vp~~~~~~~~~~ 83 (129)
T d2csua1 5 FFNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQGVKAYKSVKDIPDEIDLAII-VVPKRFVKDTLIQ 83 (129)
T ss_dssp TTSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEETTEECBSSTTSCSSCCSEEEE-CSCHHHHHHHHHH
T ss_pred hCCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccCCeEeecchhhcCCCCceEEE-ecChHHhHHHHHH
Confidence 4678999999999 889999999987766 47888866543211 111222222223333322 2356778888888
Q ss_pred HHHHhCCccEE-EECCCC
Q 022386 83 TINHFGKLDIL-VNAAAG 99 (298)
Q Consensus 83 ~~~~~~~id~l-i~~ag~ 99 (298)
+.+. ++..+ +..+|+
T Consensus 84 ~~~~--g~~~~vi~s~Gf 99 (129)
T d2csua1 84 CGEK--GVKGVVIITAGF 99 (129)
T ss_dssp HHHH--TCCEEEECCCSS
T ss_pred HHHc--CCCEEEEecccc
Confidence 8776 45544 444443
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=82.48 E-value=6.8 Score=28.20 Aligned_cols=118 Identities=12% Similarity=0.108 Sum_probs=66.6
Q ss_pred cEEEEecCCchhH--HHHHHHHHHc----CCcEEEEcCChhHHHHHHHHHHh----CCCCeEEEEccCCCHHHHHHHHHH
Q 022386 13 KVALLTGGGSGIG--FEISLQLGKH----GAAIAIMGRRKTVLRSAVAALHS----LGIPAIGLEGDVRKREDAVRVVES 82 (298)
Q Consensus 13 k~~lVtG~t~giG--~~ia~~l~~~----G~~Vv~~~r~~~~~~~~~~~~~~----~~~~~~~~~~Dls~~~~~~~~~~~ 82 (298)
..+.|.|| |.+| .++...++.. +.++++++.+.++++.....+.+ .+........ +|.+ ..
T Consensus 3 mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~--td~~---ea--- 73 (171)
T d1obba1 3 VKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT--MNLD---DV--- 73 (171)
T ss_dssp CEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE--SCHH---HH---
T ss_pred cEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe--CChh---hc---
Confidence 35677776 4444 4555556543 45899999998877765544433 2333333322 2222 22
Q ss_pred HHHHhCCccEEEECCCCCCCCCCCCCCHHHHHHHHHhh------------------------hHHHHHHHHHHHHHHHhc
Q 022386 83 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID------------------------SVGTFIMCHEALKYLKKG 138 (298)
Q Consensus 83 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n------------------------~~~~~~l~~~~~~~~~~~ 138 (298)
+...|++|+.++... .+.++....+. .....-+++.+.+.+++.
T Consensus 74 ----L~dad~Vv~~~~~g~--------~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~ 141 (171)
T d1obba1 74 ----IIDADFVINTAMVGG--------HTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKL 141 (171)
T ss_dssp ----HTTCSEEEECCCTTH--------HHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHH
T ss_pred ----ccCCCeEeeeccccc--------ccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHH
Confidence 247999999987432 12222111111 234666778888888776
Q ss_pred CCCCCCCCCCcEEEEecccc
Q 022386 139 GRGQASSSSGGIIINISATL 158 (298)
Q Consensus 139 ~~~~~~~~~~g~iv~vss~~ 158 (298)
.. .+.++++|...
T Consensus 142 ~p-------~a~~i~~TNPv 154 (171)
T d1obba1 142 SP-------KAWYLQAANPI 154 (171)
T ss_dssp CT-------TCEEEECSSCH
T ss_pred Cc-------CeEEEEECChH
Confidence 42 57788887753
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=82.43 E-value=0.66 Score=37.45 Aligned_cols=32 Identities=25% Similarity=0.513 Sum_probs=23.0
Q ss_pred cEEEEecCCchhHH-----HHHHHHHHcCCcEEEEcCC
Q 022386 13 KVALLTGGGSGIGF-----EISLQLGKHGAAIAIMGRR 45 (298)
Q Consensus 13 k~~lVtG~t~giG~-----~ia~~l~~~G~~Vv~~~r~ 45 (298)
|.++|++|+.| |. +++++|.++|++|.+++..
T Consensus 1 kkili~~~GtG-GHv~~a~al~~~L~~~G~eV~~i~~~ 37 (351)
T d1f0ka_ 1 KRLMVMAGGTG-GHVFPGLAVAHHLMAQGWQVRWLGTA 37 (351)
T ss_dssp CEEEEECCSSH-HHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred CEEEEEcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence 45666655444 55 6899999999999887644
|
| >d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Putative methyltransferase Atu0340 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=82.08 E-value=6.4 Score=31.49 Aligned_cols=79 Identities=14% Similarity=0.079 Sum_probs=52.2
Q ss_pred CCcEEEEecCC-chhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCC---CCeEEEEccCCCHHHHHHHHHHHHHH
Q 022386 11 KGKVALLTGGG-SGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLG---IPAIGLEGDVRKREDAVRVVESTINH 86 (298)
Q Consensus 11 ~gk~~lVtG~t-~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dls~~~~~~~~~~~~~~~ 86 (298)
++++||=..+. |+++.+ +++.|+.|+.++.+...++...+.+...+ .++.++..|+. ++++.....
T Consensus 132 ~~~rVLdlf~~tG~~sl~----aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~------~~l~~~~~~ 201 (309)
T d2igta1 132 RPLKVLNLFGYTGVASLV----AAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAM------KFIQREERR 201 (309)
T ss_dssp SCCEEEEETCTTCHHHHH----HHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHH------HHHHHHHHH
T ss_pred CCCeEEEecCCCcHHHHH----HHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHH------HhHHHHhhc
Confidence 46677655444 444443 45679999999999887777666554332 35888877754 334444445
Q ss_pred hCCccEEEECCCC
Q 022386 87 FGKLDILVNAAAG 99 (298)
Q Consensus 87 ~~~id~li~~ag~ 99 (298)
..+.|++|.+.-.
T Consensus 202 ~~~fD~IilDPP~ 214 (309)
T d2igta1 202 GSTYDIILTDPPK 214 (309)
T ss_dssp TCCBSEEEECCCS
T ss_pred CCCCCEEEECCCc
Confidence 5689999999753
|
| >d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=81.30 E-value=0.93 Score=34.33 Aligned_cols=40 Identities=25% Similarity=0.388 Sum_probs=33.9
Q ss_pred CCCCCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 6 KGDILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 6 ~~~~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
+..+++||.|+|.|++.- |..+|..+++.++.++.+.|+.
T Consensus 26 ~~~~~~gK~V~VvG~G~S-a~dia~~~~~~~~~~~~~~~~~ 65 (235)
T d1w4xa2 26 EPVDFSGQRVGVIGTGSS-GIQVSPQIAKQAAELFVFQRTP 65 (235)
T ss_dssp SCCCCBTCEEEEECCSHH-HHHHHHHHHHHBSEEEEEESSC
T ss_pred CCCCCCCCEEEEECCCcc-HHHHHHHHHhhhcccccccccc
Confidence 456899999999988764 8999999999999888877764
|
| >d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 1, PRMT1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=80.77 E-value=2.8 Score=33.71 Aligned_cols=76 Identities=25% Similarity=0.327 Sum_probs=52.5
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCC-cEEEEcCChhHHHHHHHHHHhC--CCCeEEEEccCCCHHHHHHHHHHHHH
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGA-AIAIMGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTIN 85 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dls~~~~~~~~~~~~~~ 85 (298)
.++||+||-.|++.|+ ++..++++|+ .|+.++.+. ......+.+... ..++.++..|+.+.+.
T Consensus 31 ~~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~n~~~~~v~~~~~~~~~~~~---------- 96 (316)
T d1oria_ 31 LFKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVEL---------- 96 (316)
T ss_dssp HHTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCC----------
T ss_pred cCCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcH-HHhhhhhHHHHhCCccccceEeccHHHccc----------
Confidence 3579999999999885 5667778897 588888764 344444444443 4569999988876421
Q ss_pred HhCCccEEEECCC
Q 022386 86 HFGKLDILVNAAA 98 (298)
Q Consensus 86 ~~~~id~li~~ag 98 (298)
...++|+++....
T Consensus 97 ~~~~~D~ivs~~~ 109 (316)
T d1oria_ 97 PVEKVDIIISEWM 109 (316)
T ss_dssp SSSCEEEEEECCC
T ss_pred ccceeEEEeeeee
Confidence 1257999887643
|
| >d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Cell division regulator MinD species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=80.72 E-value=0.58 Score=35.66 Aligned_cols=33 Identities=18% Similarity=0.429 Sum_probs=28.5
Q ss_pred cEEEEecCCchhHH-----HHHHHHHHcCCcEEEEcCC
Q 022386 13 KVALLTGGGSGIGF-----EISLQLGKHGAAIAIMGRR 45 (298)
Q Consensus 13 k~~lVtG~t~giG~-----~ia~~l~~~G~~Vv~~~r~ 45 (298)
|++.|+++-||.|+ ++|..|+++|.+|.+++-+
T Consensus 2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D 39 (232)
T d1hyqa_ 2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDAD 39 (232)
T ss_dssp EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 78999999999887 5677888999999999766
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=80.25 E-value=0.77 Score=35.88 Aligned_cols=31 Identities=16% Similarity=0.348 Sum_probs=26.5
Q ss_pred EEEEecCCchhHHHHHHHHHHcCCcEEEEcCC
Q 022386 14 VALLTGGGSGIGFEISLQLGKHGAAIAIMGRR 45 (298)
Q Consensus 14 ~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~ 45 (298)
.|+|.|| |--|...|..|+++|++|+++.++
T Consensus 2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~ 32 (347)
T d2ivda1 2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESS 32 (347)
T ss_dssp CEEEECC-BHHHHHHHHHHHTTTCCEEEECSS
T ss_pred eEEEECC-CHHHHHHHHHHHhCCCCEEEEecC
Confidence 4788887 556999999999999999999775
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=80.22 E-value=0.81 Score=35.73 Aligned_cols=31 Identities=29% Similarity=0.408 Sum_probs=26.5
Q ss_pred EEEecCCchhHHHHHHHHHHcCCcEEEEcCCh
Q 022386 15 ALLTGGGSGIGFEISLQLGKHGAAIAIMGRRK 46 (298)
Q Consensus 15 ~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~ 46 (298)
|+|.|| |-.|..+|.+|+++|.+|++++++.
T Consensus 7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~ 37 (276)
T d1ryia1 7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT 37 (276)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 666654 6779999999999999999999864
|
| >d1m1na_ c.92.2.3 (A:) Nitrogenase iron-molybdenum protein, alpha chain {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Chelatase-like superfamily: "Helical backbone" metal receptor family: Nitrogenase iron-molybdenum protein domain: Nitrogenase iron-molybdenum protein, alpha chain species: Azotobacter vinelandii [TaxId: 354]
Probab=80.08 E-value=1.9 Score=37.15 Aligned_cols=81 Identities=16% Similarity=0.076 Sum_probs=51.6
Q ss_pred CCCCcEEEEecCCchhHHHHHHHHHHcCCcEEEEcCChhHHHHHHHHHHhCCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Q 022386 9 ILKGKVALLTGGGSGIGFEISLQLGKHGAAIAIMGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG 88 (298)
Q Consensus 9 ~l~gk~~lVtG~t~giG~~ia~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~ 88 (298)
.|.||+++|.|+. ....++++.|.+.|..|+.++-.....+.........+.... ..|-.|..++.+++++.
T Consensus 342 ~l~Gkrv~i~~~~-~~~~~l~~~l~elGmevv~~~~~~~~~~d~~~~~~~~~~~~~--i~~d~~~~el~~~i~~~----- 413 (477)
T d1m1na_ 342 RLEGKRVMLYIGG-LRPRHVIGAYEDLGMEVVGTGYEFAHNDDYDRTMKEMGDSTL--LYDDVTGYEFEEFVKRI----- 413 (477)
T ss_dssp HHTTCEEEECBSS-SHHHHTHHHHHTTTCEEEEEEESSCCHHHHHTTTTTSCTTCE--EEESCBHHHHHHHHHHH-----
T ss_pred hhcCCcEEEecCc-hhHHHHHHHHHHCCCEEEEEeecCCChHHHHHHHHhcCCCcE--EecCCCHHHHHHHHHhc-----
Confidence 3689999998764 578999999999999988775543322222222222232222 23445667777777754
Q ss_pred CccEEEECC
Q 022386 89 KLDILVNAA 97 (298)
Q Consensus 89 ~id~li~~a 97 (298)
++|+++-+.
T Consensus 414 ~pDL~ig~~ 422 (477)
T d1m1na_ 414 KPDLIGSGI 422 (477)
T ss_dssp CCSEEEECH
T ss_pred CCCEEEECc
Confidence 789887543
|