AtATG18a protein (Arabidopsis thaliana)

STRING 9.05

AtATG18a protein (Arabidopsis thaliana) - STRING network view

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	AtATG18a	AtATG18a; Required for autophagosome formation during nutrient deprivation and senescence. (425 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	ATATG8E	AtATG8e; microtubule binding; Involved in autophagy. Under nutrient starvation the protein loca [...] (122 aa)		•	0.786
	AT3G61710	autophagy protein Apg6 family; autophagy protein Apg6 family; FUNCTIONS IN- molecular_function [...] (517 aa)		•	0.784
	APG7	APG7 (AUTOPHAGY 7); APG8 activating enzyme; Component of autophagy conjugation pathway. Require [...] (697 aa)	•	•	0.752
	ATG18F	AtATG18f; AtATG18f; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- response to starvati [...] (763 aa)		•	0.677
	ATG3	ATG3; ATG3; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- autophagy; LOCATED IN- cellu [...] (313 aa)	•	•	0.673
	ATG8F	ATG8F (autophagy 8f); microtubule binding; autophagy 8f (ATG8F); FUNCTIONS IN- microtubule bind [...] (121 aa)		•	0.573
	VTI1B	VTI1B; SNARE binding / receptor/ soluble NSF attachment protein; member of VTI1 Gene Family. No [...] (222 aa)		•	0.524
	COS1	COS1 (COI1 SUPPRESSOR1); 6,7-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazin [...] (227 aa)		•	0.434
	APG9	APG9 (autophagy 9); Involved in autophagy, the process of vacuolar bulk degradation of cytoplas [...] (866 aa)		•	0.429
	AT5G04170	calcium-binding EF hand family protein; calcium-binding EF hand family protein; FUNCTIONS IN- c [...] (354 aa)	•		0.416

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes

Server load: very high (>100%)

Permalink