Query 022387
Match_columns 298
No_of_seqs 234 out of 2093
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 04:38:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022387.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022387hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vu4_A KMHSV2; beta-propeller 100.0 2.3E-30 7.9E-35 234.5 26.7 200 82-297 16-234 (355)
2 4gqb_B Methylosome protein 50; 100.0 3.9E-30 1.3E-34 232.6 26.8 201 82-293 124-334 (344)
3 2ynn_A Coatomer subunit beta'; 100.0 1.8E-29 6.3E-34 223.5 29.7 206 82-297 52-266 (304)
4 4gqb_B Methylosome protein 50; 100.0 2E-29 7E-34 227.9 26.6 203 83-295 80-294 (344)
5 1got_B GT-beta; complex (GTP-b 100.0 1.4E-28 4.7E-33 221.2 30.8 205 81-297 51-264 (340)
6 3ow8_A WD repeat-containing pr 100.0 1.3E-28 4.6E-33 220.0 29.9 204 82-297 77-286 (321)
7 2ynn_A Coatomer subunit beta'; 100.0 1.4E-28 4.7E-33 217.8 28.0 205 82-297 10-224 (304)
8 1vyh_C Platelet-activating fac 100.0 1.3E-28 4.6E-33 227.1 28.2 205 81-297 104-334 (410)
9 4g56_B MGC81050 protein; prote 100.0 4.1E-29 1.4E-33 226.6 23.9 200 82-292 136-345 (357)
10 1vyh_C Platelet-activating fac 100.0 9.4E-29 3.2E-33 228.2 26.4 207 81-297 146-376 (410)
11 3ow8_A WD repeat-containing pr 100.0 3E-28 1E-32 217.7 27.4 206 81-297 28-244 (321)
12 2pbi_B Guanine nucleotide-bind 100.0 8.1E-28 2.8E-32 217.7 30.1 207 81-297 60-278 (354)
13 3frx_A Guanine nucleotide-bind 100.0 7.3E-28 2.5E-32 214.7 28.9 207 81-297 13-234 (319)
14 4ery_A WD repeat-containing pr 100.0 2.1E-27 7.2E-32 210.0 29.9 204 82-297 20-230 (312)
15 1erj_A Transcriptional repress 100.0 4E-27 1.4E-31 215.9 29.4 199 87-297 125-348 (393)
16 4g56_B MGC81050 protein; prote 100.0 3E-28 1E-32 220.9 21.6 207 82-297 91-308 (357)
17 3f3f_A Nucleoporin SEH1; struc 100.0 3.9E-27 1.3E-31 208.2 27.1 208 80-296 6-343 (351)
18 2pbi_B Guanine nucleotide-bind 100.0 8.2E-27 2.8E-31 211.1 28.8 196 82-287 151-354 (354)
19 2pm7_B Protein transport prote 100.0 4.1E-27 1.4E-31 207.7 26.1 201 81-291 5-239 (297)
20 1got_B GT-beta; complex (GTP-b 100.0 8.2E-27 2.8E-31 209.6 28.2 195 82-287 140-340 (340)
21 3iz6_a 40S ribosomal protein R 100.0 4.9E-28 1.7E-32 220.9 19.8 207 80-297 61-287 (380)
22 1nr0_A Actin interacting prote 100.0 6.2E-27 2.1E-31 226.6 28.6 208 81-297 55-277 (611)
23 3fm0_A Protein CIAO1; WDR39,SG 100.0 6.6E-27 2.3E-31 210.7 26.3 196 83-289 13-224 (345)
24 3zwl_B Eukaryotic translation 100.0 3.5E-26 1.2E-30 204.6 29.2 208 80-297 27-256 (369)
25 4h5i_A Guanine nucleotide-exch 100.0 2.1E-26 7.1E-31 209.4 28.0 195 83-291 131-344 (365)
26 2xzm_R RACK1; ribosome, transl 100.0 4.3E-26 1.5E-30 205.0 28.1 200 81-290 17-244 (343)
27 3bg1_A Protein SEC13 homolog; 100.0 9.3E-27 3.2E-31 207.3 23.3 201 81-290 9-247 (316)
28 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.6E-26 1.2E-30 205.9 26.6 205 82-297 58-342 (345)
29 3frx_A Guanine nucleotide-bind 100.0 1.4E-25 4.9E-30 199.8 29.5 200 82-296 62-273 (319)
30 2pm7_B Protein transport prote 100.0 7.3E-26 2.5E-30 199.6 27.2 198 82-289 50-284 (297)
31 1erj_A Transcriptional repress 100.0 7.2E-26 2.5E-30 207.5 28.1 198 83-291 62-288 (393)
32 3mmy_A MRNA export factor; mRN 100.0 2.2E-25 7.5E-30 199.3 30.5 209 80-297 34-311 (368)
33 4e54_B DNA damage-binding prot 100.0 4E-27 1.4E-31 218.5 19.6 204 82-296 116-333 (435)
34 2hes_X YDR267CP; beta-propelle 99.9 1.3E-25 4.3E-30 201.1 26.7 198 84-292 57-282 (330)
35 3k26_A Polycomb protein EED; W 99.9 4E-26 1.4E-30 204.2 22.6 200 82-290 112-366 (366)
36 4aow_A Guanine nucleotide-bind 99.9 2.9E-25 1E-29 197.1 27.8 208 81-297 34-253 (340)
37 3dm0_A Maltose-binding peripla 99.9 1.9E-25 6.6E-30 218.9 28.6 206 82-297 379-599 (694)
38 2ymu_A WD-40 repeat protein; u 99.9 1.5E-25 5E-30 213.7 26.5 191 82-287 382-577 (577)
39 2hes_X YDR267CP; beta-propelle 99.9 3.8E-25 1.3E-29 198.0 27.6 197 82-291 11-231 (330)
40 4ggc_A P55CDC, cell division c 99.9 8.6E-25 2.9E-29 192.3 29.2 194 88-291 28-316 (318)
41 4gga_A P55CDC, cell division c 99.9 7E-25 2.4E-29 202.3 29.3 206 82-293 144-398 (420)
42 3ei3_B DNA damage-binding prot 99.9 3.5E-25 1.2E-29 201.0 26.5 202 82-296 70-288 (383)
43 4h5i_A Guanine nucleotide-exch 99.9 6.4E-25 2.2E-29 199.6 28.2 159 130-297 136-307 (365)
44 3jrp_A Fusion protein of prote 99.9 3.8E-25 1.3E-29 198.8 26.4 203 81-292 7-242 (379)
45 2xzm_R RACK1; ribosome, transl 99.9 9E-25 3.1E-29 196.3 28.7 199 82-294 73-289 (343)
46 2oaj_A Protein SNI1; WD40 repe 99.9 2.1E-25 7.2E-30 225.1 27.0 200 82-295 14-247 (902)
47 1gxr_A ESG1, transducin-like e 99.9 4.2E-24 1.4E-28 188.9 32.1 202 83-296 95-302 (337)
48 4ery_A WD repeat-containing pr 99.9 1.5E-24 5.2E-29 191.5 29.0 198 82-289 104-311 (312)
49 3gre_A Serine/threonine-protei 99.9 1.8E-25 6E-30 206.5 23.8 206 79-297 57-299 (437)
50 3iz6_a 40S ribosomal protein R 99.9 2.6E-25 8.8E-30 202.9 23.9 204 81-293 153-378 (380)
51 1nr0_A Actin interacting prote 99.9 1.4E-24 4.8E-29 210.1 29.5 203 82-296 144-361 (611)
52 3dwl_C Actin-related protein 2 99.9 7.9E-27 2.7E-31 211.0 12.7 197 84-293 10-239 (377)
53 2ymu_A WD-40 repeat protein; u 99.9 1.8E-24 6E-29 206.3 28.9 200 82-297 341-545 (577)
54 1k8k_C P40, ARP2/3 complex 41 99.9 8.5E-25 2.9E-29 196.5 24.9 203 83-297 6-240 (372)
55 4a11_B DNA excision repair pro 99.9 1E-24 3.6E-29 197.8 25.6 203 82-295 40-281 (408)
56 1yfq_A Cell cycle arrest prote 99.9 6.9E-25 2.3E-29 195.1 23.2 203 83-297 54-289 (342)
57 3bg1_A Protein SEC13 homolog; 99.9 3.8E-25 1.3E-29 196.8 20.6 199 82-289 54-292 (316)
58 3dm0_A Maltose-binding peripla 99.9 2.9E-24 9.9E-29 210.6 28.8 203 82-297 427-639 (694)
59 3i2n_A WD repeat-containing pr 99.9 8.9E-25 3.1E-29 195.0 22.6 202 81-294 107-357 (357)
60 1sq9_A Antiviral protein SKI8; 99.9 1.8E-24 6.1E-29 196.5 23.4 204 82-297 59-329 (397)
61 2pm9_A Protein WEB1, protein t 99.9 1.5E-24 5E-29 198.0 22.1 204 83-297 65-301 (416)
62 1r5m_A SIR4-interacting protei 99.9 4E-24 1.4E-28 194.8 24.7 200 84-297 107-326 (425)
63 1gxr_A ESG1, transducin-like e 99.9 1.8E-23 6E-28 184.9 28.1 194 82-288 138-335 (337)
64 3mkq_A Coatomer beta'-subunit; 99.9 1.3E-23 4.5E-28 208.0 30.3 206 82-297 52-266 (814)
65 3jrp_A Fusion protein of prote 99.9 1.4E-23 4.8E-28 188.5 27.7 203 82-293 52-290 (379)
66 4aez_A CDC20, WD repeat-contai 99.9 2.1E-23 7.2E-28 191.2 29.1 201 82-296 173-386 (401)
67 2aq5_A Coronin-1A; WD40 repeat 99.9 3.2E-23 1.1E-27 189.7 30.2 200 81-292 77-301 (402)
68 3dw8_B Serine/threonine-protei 99.9 3.2E-24 1.1E-28 197.8 23.5 201 84-297 27-323 (447)
69 2w18_A PALB2, fancn, partner a 99.9 4.1E-24 1.4E-28 191.0 23.0 193 82-288 108-355 (356)
70 4aez_A CDC20, WD repeat-contai 99.9 2.9E-23 9.9E-28 190.2 28.7 203 82-295 131-341 (401)
71 4aow_A Guanine nucleotide-bind 99.9 1.2E-23 4.2E-28 186.6 25.4 201 82-293 125-340 (340)
72 3vl1_A 26S proteasome regulato 99.9 2E-23 6.9E-28 191.1 27.3 197 87-293 99-325 (420)
73 1sq9_A Antiviral protein SKI8; 99.9 1.1E-23 3.7E-28 191.3 24.9 202 81-297 12-274 (397)
74 3ei3_B DNA damage-binding prot 99.9 2.8E-23 9.5E-28 188.4 26.9 194 83-290 161-382 (383)
75 3odt_A Protein DOA1; ubiquitin 99.9 7.6E-23 2.6E-27 179.1 28.7 201 81-297 14-221 (313)
76 4a11_B DNA excision repair pro 99.9 2.6E-23 8.7E-28 188.6 26.3 201 83-296 97-371 (408)
77 3v7d_B Cell division control p 99.9 8.6E-23 3E-27 189.8 30.3 200 82-296 159-387 (464)
78 2j04_B YDR362CP, TAU91; beta p 99.9 3.4E-24 1.2E-28 204.0 20.9 196 83-291 205-429 (524)
79 3k26_A Polycomb protein EED; W 99.9 2.5E-24 8.6E-29 192.5 18.6 196 84-293 68-321 (366)
80 3gre_A Serine/threonine-protei 99.9 1.2E-23 4.1E-28 194.1 23.5 205 83-297 109-366 (437)
81 3mkq_A Coatomer beta'-subunit; 99.9 4.7E-23 1.6E-27 204.1 29.1 205 82-297 10-224 (814)
82 2pm9_A Protein WEB1, protein t 99.9 2.1E-24 7.3E-29 196.9 17.7 203 81-293 109-340 (416)
83 2vdu_B TRNA (guanine-N(7)-)-me 99.9 3.5E-23 1.2E-27 192.6 26.2 202 86-297 5-278 (450)
84 3i2n_A WD repeat-containing pr 99.9 2E-23 6.8E-28 186.2 22.7 204 82-294 15-247 (357)
85 1p22_A F-BOX/WD-repeat protein 99.9 8.8E-23 3E-27 189.0 27.4 195 83-297 131-332 (435)
86 1pgu_A Actin interacting prote 99.9 6.9E-23 2.4E-27 195.9 27.5 203 83-297 16-290 (615)
87 1k8k_C P40, ARP2/3 complex 41 99.9 2.9E-23 1E-27 186.4 23.5 200 82-293 93-364 (372)
88 3v7d_B Cell division control p 99.9 1.1E-22 3.8E-27 189.1 27.8 199 82-297 118-348 (464)
89 3vl1_A 26S proteasome regulato 99.9 5.2E-23 1.8E-27 188.3 25.1 197 82-291 136-366 (420)
90 2ovr_B FBW7, F-BOX/WD repeat p 99.9 1.6E-22 5.6E-27 187.4 28.5 196 82-297 115-315 (445)
91 3sfz_A APAF-1, apoptotic pepti 99.9 1.1E-22 3.8E-27 210.6 30.2 205 81-297 611-878 (1249)
92 1r5m_A SIR4-interacting protei 99.9 9E-23 3.1E-27 185.7 25.9 203 82-297 42-285 (425)
93 3jro_A Fusion protein of prote 99.9 3.9E-23 1.3E-27 204.7 24.1 203 81-292 5-240 (753)
94 1yfq_A Cell cycle arrest prote 99.9 3.8E-23 1.3E-27 183.8 21.1 195 81-291 7-226 (342)
95 3mmy_A MRNA export factor; mRN 99.9 4.5E-23 1.5E-27 184.2 21.7 197 82-289 83-345 (368)
96 3odt_A Protein DOA1; ubiquitin 99.9 3.8E-22 1.3E-26 174.7 27.1 195 82-296 101-302 (313)
97 1p22_A F-BOX/WD-repeat protein 99.9 1.7E-22 5.7E-27 187.1 25.8 191 82-292 170-367 (435)
98 2j04_B YDR362CP, TAU91; beta p 99.9 1.7E-23 5.9E-28 199.2 19.3 204 84-296 132-392 (524)
99 2xyi_A Probable histone-bindin 99.9 2.1E-22 7.1E-27 186.6 24.8 199 82-291 178-411 (430)
100 2xyi_A Probable histone-bindin 99.9 1.9E-22 6.5E-27 186.8 23.6 199 81-290 124-353 (430)
101 3zwl_B Eukaryotic translation 99.9 1.1E-21 3.6E-26 175.3 27.7 209 81-297 70-311 (369)
102 3dwl_C Actin-related protein 2 99.9 1.4E-23 4.9E-28 189.6 15.1 194 82-289 52-280 (377)
103 3sfz_A APAF-1, apoptotic pepti 99.9 3.3E-23 1.1E-27 214.5 19.8 201 84-296 960-1164(1249)
104 3jro_A Fusion protein of prote 99.9 2.5E-22 8.7E-27 198.9 25.1 202 82-292 50-287 (753)
105 2ovr_B FBW7, F-BOX/WD repeat p 99.9 2.2E-21 7.6E-26 179.8 28.7 196 82-297 156-355 (445)
106 4gq1_A NUP37; propeller, trans 99.9 2.1E-22 7.1E-27 184.6 21.5 198 81-289 132-388 (393)
107 4gga_A P55CDC, cell division c 99.9 1.7E-21 5.7E-26 179.7 27.3 198 88-297 108-317 (420)
108 3dw8_B Serine/threonine-protei 99.9 1.8E-22 6.1E-27 186.0 20.5 197 86-295 94-378 (447)
109 2vdu_B TRNA (guanine-N(7)-)-me 99.9 2E-21 6.9E-26 180.7 26.5 197 83-291 100-342 (450)
110 3lrv_A PRE-mRNA-splicing facto 99.9 1.7E-22 5.7E-27 181.4 18.5 187 92-296 43-250 (343)
111 2j04_A TAU60, YPL007P, hypothe 99.9 3.1E-21 1.1E-25 182.6 27.6 188 83-289 83-296 (588)
112 3vu4_A KMHSV2; beta-propeller 99.9 1.5E-21 5.1E-26 176.5 23.2 188 87-292 60-273 (355)
113 4e54_B DNA damage-binding prot 99.9 4E-22 1.4E-26 184.8 19.5 203 82-294 161-434 (435)
114 2aq5_A Coronin-1A; WD40 repeat 99.9 5.8E-22 2E-26 181.3 20.3 200 82-293 128-345 (402)
115 1l0q_A Surface layer protein; 99.9 4.1E-20 1.4E-24 167.6 32.2 200 86-297 32-240 (391)
116 1pgu_A Actin interacting prote 99.9 3.7E-21 1.3E-25 183.9 22.7 188 90-291 411-615 (615)
117 3bws_A Protein LP49; two-domai 99.9 1E-19 3.5E-24 167.2 29.6 204 83-297 167-397 (433)
118 1l0q_A Surface layer protein; 99.9 4.5E-19 1.5E-23 160.7 31.7 199 86-297 74-282 (391)
119 3lrv_A PRE-mRNA-splicing facto 99.9 2E-20 6.7E-25 167.8 20.6 196 82-290 122-333 (343)
120 2j04_A TAU60, YPL007P, hypothe 99.9 5E-21 1.7E-25 181.2 17.2 190 86-293 16-257 (588)
121 4gq1_A NUP37; propeller, trans 99.9 2.1E-20 7.1E-25 171.3 20.3 203 84-296 88-354 (393)
122 2oaj_A Protein SNI1; WD40 repe 99.8 2.3E-19 7.9E-24 181.0 26.3 202 83-297 486-790 (902)
123 3f3f_A Nucleoporin SEH1; struc 99.8 5.9E-19 2E-23 155.5 22.1 157 126-291 10-250 (351)
124 2w18_A PALB2, fancn, partner a 99.8 2E-18 6.8E-23 154.3 25.4 205 87-297 41-321 (356)
125 3bws_A Protein LP49; two-domai 99.8 4.1E-18 1.4E-22 156.4 28.2 201 83-290 209-432 (433)
126 2hqs_A Protein TOLB; TOLB, PAL 99.8 2E-17 6.7E-22 152.8 27.0 199 83-292 176-389 (415)
127 2ojh_A Uncharacterized protein 99.8 2.2E-16 7.7E-21 136.0 22.1 203 83-293 39-261 (297)
128 1nir_A Nitrite reductase; hemo 99.7 4.8E-16 1.6E-20 148.5 26.1 194 92-297 144-362 (543)
129 4ggc_A P55CDC, cell division c 99.7 1.5E-16 5E-21 139.4 20.5 148 131-293 29-184 (318)
130 1pby_B Quinohemoprotein amine 99.7 1.1E-15 3.9E-20 134.6 24.9 205 87-297 35-317 (337)
131 1nir_A Nitrite reductase; hemo 99.7 1.5E-15 5.3E-20 145.0 27.3 198 87-294 180-462 (543)
132 3vgz_A Uncharacterized protein 99.7 6.2E-15 2.1E-19 131.1 29.4 200 86-297 41-269 (353)
133 2oit_A Nucleoporin 214KDA; NH2 99.7 9.9E-17 3.4E-21 149.1 17.5 197 87-291 38-279 (434)
134 2hqs_A Protein TOLB; TOLB, PAL 99.7 3.9E-15 1.3E-19 137.3 26.2 188 97-294 143-348 (415)
135 1ri6_A Putative isomerase YBHE 99.7 5.3E-15 1.8E-19 130.6 25.5 197 85-289 37-261 (343)
136 1jmx_B Amine dehydrogenase; ox 99.7 1.7E-15 5.9E-20 134.3 22.0 206 87-297 44-332 (349)
137 3u4y_A Uncharacterized protein 99.7 1.6E-14 5.6E-19 127.6 27.4 199 86-293 41-255 (331)
138 2ecf_A Dipeptidyl peptidase IV 99.7 1.2E-15 4.1E-20 149.8 20.2 199 85-295 36-326 (741)
139 3vgz_A Uncharacterized protein 99.7 2.9E-14 1E-18 126.7 26.6 200 87-297 90-310 (353)
140 3o4h_A Acylamino-acid-releasin 99.7 3.9E-15 1.3E-19 142.6 19.5 194 86-294 22-231 (582)
141 3hfq_A Uncharacterized protein 99.7 1.4E-13 4.7E-18 122.8 28.3 202 85-294 85-323 (347)
142 1ri6_A Putative isomerase YBHE 99.7 3.9E-14 1.3E-18 125.1 24.4 197 87-293 85-313 (343)
143 3u4y_A Uncharacterized protein 99.6 8.1E-14 2.8E-18 123.1 25.3 191 91-293 3-210 (331)
144 1xfd_A DIP, dipeptidyl aminope 99.6 1.7E-15 5.7E-20 148.3 15.7 206 87-295 18-294 (723)
145 3hfq_A Uncharacterized protein 99.6 2E-13 6.8E-18 121.7 25.6 196 86-289 40-270 (347)
146 2ecf_A Dipeptidyl peptidase IV 99.6 2.2E-14 7.6E-19 140.8 18.6 194 87-292 110-370 (741)
147 2z3z_A Dipeptidyl aminopeptida 99.6 3.1E-14 1.1E-18 139.1 19.2 198 86-296 82-349 (706)
148 2oit_A Nucleoporin 214KDA; NH2 99.6 1.7E-13 5.9E-18 127.2 22.6 199 83-289 90-332 (434)
149 1jmx_B Amine dehydrogenase; ox 99.6 1.7E-13 5.9E-18 121.3 20.8 190 90-297 4-291 (349)
150 2z3z_A Dipeptidyl aminopeptida 99.6 5.8E-14 2E-18 137.2 18.7 194 87-293 27-296 (706)
151 2ojh_A Uncharacterized protein 99.6 4.6E-13 1.6E-17 115.0 22.1 176 106-296 22-211 (297)
152 1pby_B Quinohemoprotein amine 99.6 1.1E-12 3.7E-17 115.4 24.4 183 98-297 2-276 (337)
153 1k32_A Tricorn protease; prote 99.6 1E-13 3.6E-18 141.7 20.1 193 87-292 297-504 (1045)
154 3scy_A Hypothetical bacterial 99.6 2.1E-12 7.1E-17 115.8 25.6 199 84-292 48-295 (361)
155 1jof_A Carboxy-CIS,CIS-muconat 99.5 1.8E-12 6E-17 117.0 24.2 207 87-294 41-296 (365)
156 1z68_A Fibroblast activation p 99.5 1.9E-14 6.6E-19 141.0 11.1 204 90-294 20-295 (719)
157 1xfd_A DIP, dipeptidyl aminope 99.5 2.8E-13 9.4E-18 132.5 18.7 202 85-290 113-393 (723)
158 3o4h_A Acylamino-acid-releasin 99.5 2.3E-13 7.9E-18 130.2 17.3 191 86-294 65-278 (582)
159 1k32_A Tricorn protease; prote 99.5 3.7E-13 1.3E-17 137.6 19.9 192 87-293 246-464 (1045)
160 3scy_A Hypothetical bacterial 99.5 2.3E-11 7.9E-16 109.0 27.7 201 85-295 99-344 (361)
161 3pe7_A Oligogalacturonate lyas 99.5 4.2E-12 1.4E-16 114.5 20.7 192 91-293 41-276 (388)
162 4a5s_A Dipeptidyl peptidase 4 99.5 1.6E-12 5.3E-17 128.3 18.7 202 87-292 18-296 (740)
163 1q7f_A NHL, brain tumor CG1071 99.5 6E-11 2.1E-15 102.7 26.4 194 86-292 77-282 (286)
164 2oiz_A Aromatic amine dehydrog 99.4 3.6E-11 1.2E-15 108.7 24.5 197 90-297 54-343 (361)
165 1q7f_A NHL, brain tumor CG1071 99.4 2.7E-10 9.4E-15 98.5 28.7 201 86-297 30-244 (286)
166 2gop_A Trilobed protease; beta 99.4 4.1E-11 1.4E-15 106.4 22.1 193 86-293 59-294 (347)
167 1jof_A Carboxy-CIS,CIS-muconat 99.4 1E-10 3.4E-15 105.5 23.7 197 88-291 85-342 (365)
168 3fvz_A Peptidyl-glycine alpha- 99.4 1.9E-10 6.4E-15 102.3 24.3 202 86-297 24-284 (329)
169 1z68_A Fibroblast activation p 99.4 1.3E-12 4.4E-17 127.9 9.7 194 87-292 61-348 (719)
170 3dsm_A Uncharacterized protein 99.3 1.1E-09 3.7E-14 97.5 25.4 196 86-297 84-308 (328)
171 3fvz_A Peptidyl-glycine alpha- 99.3 7.9E-10 2.7E-14 98.3 24.1 196 86-290 91-322 (329)
172 3pe7_A Oligogalacturonate lyas 99.3 2.2E-10 7.5E-15 103.2 19.5 207 84-293 79-332 (388)
173 3c5m_A Oligogalacturonate lyas 99.3 6.4E-11 2.2E-15 106.6 15.4 194 88-293 38-276 (396)
174 2xdw_A Prolyl endopeptidase; a 99.3 9E-10 3.1E-14 108.0 24.8 209 84-297 123-375 (710)
175 3no2_A Uncharacterized protein 99.3 1E-09 3.5E-14 95.5 22.5 187 96-297 4-202 (276)
176 3dsm_A Uncharacterized protein 99.3 6.3E-09 2.2E-13 92.5 28.0 191 87-294 45-257 (328)
177 2dg1_A DRP35, lactonase; beta 99.3 1E-08 3.4E-13 90.5 28.7 203 85-297 44-269 (333)
178 1xip_A Nucleoporin NUP159; bet 99.3 6.7E-10 2.3E-14 101.3 20.6 170 87-278 39-233 (388)
179 3azo_A Aminopeptidase; POP fam 99.3 2.6E-10 8.8E-15 110.5 19.0 198 90-292 81-327 (662)
180 4a5s_A Dipeptidyl peptidase 4 99.2 1.5E-10 5.1E-15 114.1 17.2 192 89-293 65-356 (740)
181 3e5z_A Putative gluconolactona 99.2 8.5E-09 2.9E-13 89.7 25.6 194 85-297 27-252 (296)
182 1qks_A Cytochrome CD1 nitrite 99.2 2.2E-08 7.7E-13 95.8 28.5 190 95-296 165-379 (567)
183 3azo_A Aminopeptidase; POP fam 99.2 7.8E-10 2.7E-14 107.1 17.9 206 84-293 128-372 (662)
184 3c5m_A Oligogalacturonate lyas 99.2 6.5E-10 2.2E-14 100.0 16.2 197 90-293 85-332 (396)
185 2mad_H Methylamine dehydrogena 99.2 4.6E-08 1.6E-12 88.8 27.7 197 90-296 70-356 (373)
186 1rwi_B Serine/threonine-protei 99.1 6.8E-09 2.3E-13 88.6 19.0 196 87-294 68-268 (270)
187 1xip_A Nucleoporin NUP159; bet 99.1 1.9E-09 6.4E-14 98.3 16.2 146 128-293 38-194 (388)
188 2dg1_A DRP35, lactonase; beta 99.1 4.4E-09 1.5E-13 92.8 17.5 192 86-290 6-213 (333)
189 2bkl_A Prolyl endopeptidase; m 99.1 8.5E-09 2.9E-13 100.9 20.3 205 84-296 119-356 (695)
190 3no2_A Uncharacterized protein 99.0 1.4E-07 4.7E-12 81.9 24.7 196 87-297 38-259 (276)
191 2bkl_A Prolyl endopeptidase; m 99.0 9.4E-09 3.2E-13 100.6 19.0 199 89-293 171-400 (695)
192 3e5z_A Putative gluconolactona 99.0 2.1E-07 7.2E-12 80.7 25.2 203 84-295 67-291 (296)
193 3hrp_A Uncharacterized protein 99.0 1.6E-07 5.5E-12 86.2 25.5 196 86-294 131-358 (409)
194 1qks_A Cytochrome CD1 nitrite 99.0 4.8E-07 1.7E-11 86.5 29.3 192 86-290 197-421 (567)
195 1pjx_A Dfpase, DIISOPROPYLFLUO 99.0 2.3E-07 7.9E-12 80.7 24.8 202 86-291 71-300 (314)
196 1pjx_A Dfpase, DIISOPROPYLFLUO 99.0 2.7E-07 9.2E-12 80.2 25.1 199 87-296 19-262 (314)
197 2gop_A Trilobed protease; beta 99.0 5.4E-08 1.8E-12 86.1 20.9 189 88-292 106-332 (347)
198 3g4e_A Regucalcin; six bladed 99.0 3.1E-07 1.1E-11 80.1 24.8 194 88-297 15-236 (297)
199 2xdw_A Prolyl endopeptidase; a 99.0 1.1E-07 3.7E-12 93.2 24.1 201 88-292 173-416 (710)
200 1rwi_B Serine/threonine-protei 99.0 1.1E-07 3.8E-12 80.9 20.4 192 87-292 25-224 (270)
201 1yr2_A Prolyl oligopeptidase; 99.0 1.1E-07 3.8E-12 93.7 22.9 203 86-296 163-400 (741)
202 3sjl_D Methylamine dehydrogena 98.9 3.3E-07 1.1E-11 83.3 23.3 112 90-206 82-212 (386)
203 2oiz_A Aromatic amine dehydrog 98.9 7.5E-07 2.6E-11 80.2 25.2 72 194-271 286-360 (361)
204 2z2n_A Virginiamycin B lyase; 98.9 2.5E-06 8.4E-11 73.2 27.5 191 86-293 15-215 (299)
205 3iuj_A Prolyl endopeptidase; h 98.9 2.3E-07 8E-12 90.7 21.7 200 83-291 126-360 (693)
206 2iwa_A Glutamine cyclotransfer 98.9 2.7E-06 9.2E-11 73.4 25.8 192 87-291 22-238 (266)
207 3c75_H MADH, methylamine dehyd 98.8 4.4E-07 1.5E-11 83.7 20.6 201 90-297 122-409 (426)
208 2z2n_A Virginiamycin B lyase; 98.8 7.8E-06 2.7E-10 70.0 27.6 191 86-292 57-256 (299)
209 2ghs_A AGR_C_1268P; regucalcin 98.8 3.2E-06 1.1E-10 74.8 25.4 192 87-297 50-266 (326)
210 2hz6_A Endoplasmic reticulum t 98.8 6.9E-09 2.4E-13 94.0 7.4 182 96-297 8-199 (369)
211 2qc5_A Streptogramin B lactona 98.7 4.2E-05 1.4E-09 65.4 28.3 192 86-293 62-262 (300)
212 2qc5_A Streptogramin B lactona 98.7 5.2E-05 1.8E-09 64.8 28.5 191 86-293 20-220 (300)
213 2qe8_A Uncharacterized protein 98.7 4E-06 1.4E-10 74.6 21.6 204 86-293 17-281 (343)
214 3nol_A Glutamine cyclotransfer 98.6 1.5E-05 5.3E-10 68.2 23.0 181 84-277 41-243 (262)
215 1mda_H Methylamine dehydrogena 98.6 1.8E-06 6.2E-11 78.1 17.9 196 90-297 69-353 (368)
216 1yr2_A Prolyl oligopeptidase; 98.6 3.3E-06 1.1E-10 83.1 20.7 197 89-293 212-444 (741)
217 3nok_A Glutaminyl cyclase; bet 98.6 6.3E-06 2.2E-10 70.7 19.3 145 138-297 63-217 (268)
218 3g4e_A Regucalcin; six bladed 98.6 4.2E-05 1.4E-09 66.4 25.3 192 85-278 53-262 (297)
219 3nok_A Glutaminyl cyclase; bet 98.6 2E-05 7E-10 67.5 22.3 183 82-276 51-253 (268)
220 3hrp_A Uncharacterized protein 98.6 2.1E-05 7.1E-10 72.0 23.8 187 91-288 176-408 (409)
221 2ghs_A AGR_C_1268P; regucalcin 98.6 2.9E-05 9.9E-10 68.5 24.1 189 86-279 90-293 (326)
222 3nol_A Glutamine cyclotransfer 98.5 2.8E-05 9.4E-10 66.6 20.8 147 139-297 52-208 (262)
223 3mbr_X Glutamine cyclotransfer 98.5 0.00015 5.2E-09 61.4 24.4 182 84-276 19-222 (243)
224 2ece_A 462AA long hypothetical 98.5 0.00011 3.9E-09 67.6 25.2 195 93-289 89-351 (462)
225 3iuj_A Prolyl endopeptidase; h 98.5 2.7E-05 9.4E-10 76.0 22.6 196 89-293 178-408 (693)
226 3mbr_X Glutamine cyclotransfer 98.5 9.4E-05 3.2E-09 62.6 22.7 149 137-297 28-186 (243)
227 3dr2_A Exported gluconolactona 98.4 0.0001 3.4E-09 64.2 23.4 194 84-285 84-302 (305)
228 2iwa_A Glutamine cyclotransfer 98.4 0.00033 1.1E-08 60.3 25.6 155 131-297 24-188 (266)
229 3dr2_A Exported gluconolactona 98.4 5E-05 1.7E-09 66.1 20.7 193 86-297 45-273 (305)
230 3sjl_D Methylamine dehydrogena 98.4 7.1E-05 2.4E-09 67.9 21.2 191 91-292 38-258 (386)
231 3q7m_A Lipoprotein YFGL, BAMB; 98.4 0.00019 6.7E-09 64.0 23.8 188 97-297 53-265 (376)
232 2xzh_A Clathrin heavy chain 1; 98.3 0.0006 2.1E-08 60.0 24.7 140 106-257 49-198 (365)
233 2mad_H Methylamine dehydrogena 98.3 0.00086 2.9E-08 60.5 26.2 116 93-212 28-166 (373)
234 3q7m_A Lipoprotein YFGL, BAMB; 98.3 0.00054 1.8E-08 61.1 24.6 182 96-297 102-303 (376)
235 2hz6_A Endoplasmic reticulum t 98.3 1E-07 3.5E-12 86.2 -0.1 143 138-297 8-156 (369)
236 2qe8_A Uncharacterized protein 98.3 5.3E-05 1.8E-09 67.3 17.6 192 84-281 65-313 (343)
237 3c75_H MADH, methylamine dehyd 98.2 0.00019 6.6E-09 66.0 21.3 188 95-292 82-297 (426)
238 2ece_A 462AA long hypothetical 98.2 0.0003 1E-08 64.8 22.1 187 89-277 141-399 (462)
239 1npe_A Nidogen, entactin; glyc 98.2 0.0018 6.2E-08 54.9 28.6 199 87-297 37-245 (267)
240 3hxj_A Pyrrolo-quinoline quino 98.2 7.6E-05 2.6E-09 64.9 16.9 181 96-297 107-290 (330)
241 1kb0_A Quinohemoprotein alcoho 98.2 8.6E-05 2.9E-09 72.4 18.6 57 239-297 457-514 (677)
242 3hxj_A Pyrrolo-quinoline quino 98.2 0.00017 5.9E-09 62.7 18.7 185 87-291 138-325 (330)
243 1bpo_A Protein (clathrin); cla 98.2 0.00085 2.9E-08 61.3 22.9 141 106-258 48-198 (494)
244 1kb0_A Quinohemoprotein alcoho 98.2 0.00013 4.6E-09 71.1 19.2 188 98-297 78-353 (677)
245 1fwx_A Nitrous oxide reductase 98.1 0.00072 2.5E-08 64.3 21.6 191 95-290 99-361 (595)
246 1yiq_A Quinohemoprotein alcoho 98.1 0.00084 2.9E-08 65.6 22.7 58 238-297 454-512 (689)
247 1yiq_A Quinohemoprotein alcoho 98.0 0.00039 1.3E-08 68.0 19.9 187 97-295 70-343 (689)
248 1fwx_A Nitrous oxide reductase 97.9 0.00052 1.8E-08 65.3 17.7 199 86-292 134-433 (595)
249 2fp8_A Strictosidine synthase; 97.9 0.0068 2.3E-07 52.8 23.6 197 88-297 21-275 (322)
250 4a2l_A BT_4663, two-component 97.8 0.0077 2.6E-07 59.4 25.6 193 88-293 175-389 (795)
251 4a2l_A BT_4663, two-component 97.8 0.025 8.5E-07 55.8 28.0 193 85-293 356-574 (795)
252 1npe_A Nidogen, entactin; glyc 97.8 0.014 4.8E-07 49.2 26.2 185 97-292 1-200 (267)
253 1kv9_A Type II quinohemoprotei 97.7 0.0035 1.2E-07 60.9 19.4 184 98-295 67-338 (668)
254 1kv9_A Type II quinohemoprotei 97.7 0.002 6.7E-08 62.7 17.5 59 237-297 436-495 (668)
255 2ad6_A Methanol dehydrogenase 97.7 0.012 4.2E-07 56.0 22.7 59 237-297 442-501 (571)
256 1mda_H Methylamine dehydrogena 97.6 0.0035 1.2E-07 56.4 17.8 94 107-203 47-158 (368)
257 2ad6_A Methanol dehydrogenase 97.5 0.017 5.7E-07 55.0 21.7 151 97-251 115-338 (571)
258 2fp8_A Strictosidine synthase; 97.5 0.04 1.4E-06 47.8 23.5 200 87-291 81-314 (322)
259 1k3i_A Galactose oxidase precu 97.5 0.0086 2.9E-07 57.9 19.4 201 88-292 245-499 (656)
260 1w6s_A Methanol dehydrogenase 97.3 0.021 7.3E-07 54.7 19.7 139 154-297 129-349 (599)
261 3v9f_A Two-component system se 97.3 0.077 2.6E-06 52.1 23.6 192 85-292 406-613 (781)
262 3v9f_A Two-component system se 97.3 0.11 3.6E-06 51.1 24.5 193 85-293 257-481 (781)
263 1w6s_A Methanol dehydrogenase 97.2 0.056 1.9E-06 51.7 21.7 148 100-251 124-345 (599)
264 2xe4_A Oligopeptidase B; hydro 97.2 0.021 7.1E-07 56.2 19.0 193 87-288 175-398 (751)
265 1flg_A Protein (quinoprotein e 97.2 0.11 3.7E-06 49.5 22.7 190 96-297 68-362 (582)
266 1flg_A Protein (quinoprotein e 97.2 0.064 2.2E-06 51.1 21.0 58 238-297 465-523 (582)
267 3amr_A 3-phytase; beta-propell 97.0 0.16 5.6E-06 45.1 23.4 184 99-297 43-271 (355)
268 3ei3_A DNA damage-binding prot 96.9 0.31 1.1E-05 50.2 24.7 176 108-290 809-999 (1158)
269 2p4o_A Hypothetical protein; p 96.9 0.18 6.1E-06 43.3 28.0 195 86-293 32-244 (306)
270 3v65_B Low-density lipoprotein 96.9 0.23 7.8E-06 44.5 25.1 199 86-296 116-324 (386)
271 2p4o_A Hypothetical protein; p 96.8 0.2 6.8E-06 43.0 23.3 181 86-277 72-276 (306)
272 2p9w_A MAL S 1 allergenic prot 96.8 0.22 7.6E-06 43.8 19.3 149 133-290 18-215 (334)
273 4hw6_A Hypothetical protein, I 96.7 0.38 1.3E-05 43.9 22.1 198 87-293 140-376 (433)
274 1xi4_A Clathrin heavy chain; a 96.6 0.016 5.4E-07 60.3 11.8 173 106-290 48-235 (1630)
275 3v64_C Agrin; beta propeller, 96.5 0.38 1.3E-05 42.4 25.4 198 86-295 73-280 (349)
276 3tc9_A Hypothetical hydrolase; 96.5 0.5 1.7E-05 43.0 22.6 198 87-293 138-373 (430)
277 3qqz_A Putative uncharacterize 96.4 0.37 1.3E-05 40.8 26.2 193 86-290 27-253 (255)
278 3tc9_A Hypothetical hydrolase; 96.4 0.58 2E-05 42.6 22.7 196 85-289 178-429 (430)
279 1ijq_A LDL receptor, low-densi 96.2 0.52 1.8E-05 40.8 27.1 181 99-290 3-195 (316)
280 2xe4_A Oligopeptidase B; hydro 96.2 0.8 2.7E-05 44.8 21.7 197 89-292 224-460 (751)
281 3p5b_L Low density lipoprotein 96.1 0.73 2.5E-05 41.4 28.4 200 86-296 112-326 (400)
282 3v65_B Low-density lipoprotein 96.1 0.72 2.5E-05 41.2 24.7 190 89-290 80-277 (386)
283 1ijq_A LDL receptor, low-densi 96.0 0.65 2.2E-05 40.2 27.5 198 87-296 31-244 (316)
284 1n7d_A LDL receptor, low-densi 95.9 0.076 2.6E-06 51.8 12.3 199 87-297 407-621 (699)
285 1k3i_A Galactose oxidase precu 95.7 0.52 1.8E-05 45.3 17.3 192 90-292 190-443 (656)
286 3v64_C Agrin; beta propeller, 95.6 1.1 3.7E-05 39.4 26.9 193 87-291 35-235 (349)
287 3sov_A LRP-6, low-density lipo 95.4 1.2 4E-05 38.7 26.1 196 87-296 36-244 (318)
288 3p5b_L Low density lipoprotein 95.1 1.8 6.1E-05 38.8 27.7 184 98-291 84-278 (400)
289 3m0c_C LDL receptor, low-densi 95.1 2.9 0.0001 41.2 27.1 182 99-291 397-590 (791)
290 3m0c_C LDL receptor, low-densi 95.0 3.1 0.00011 41.0 27.1 198 86-295 424-637 (791)
291 3amr_A 3-phytase; beta-propell 94.7 2.1 7.2E-05 37.9 19.6 131 155-289 49-209 (355)
292 3pbp_A Nucleoporin NUP82; beta 94.4 0.83 2.9E-05 41.6 13.5 106 182-290 29-158 (452)
293 3ott_A Two-component system se 93.9 4.9 0.00017 38.9 21.5 190 85-293 21-223 (758)
294 3ei3_A DNA damage-binding prot 93.9 6.7 0.00023 40.4 25.0 187 86-286 829-1058(1158)
295 1xi4_A Clathrin heavy chain; a 93.7 0.89 3E-05 47.6 13.6 192 91-295 71-294 (1630)
296 3sov_A LRP-6, low-density lipo 93.5 3.4 0.00012 35.7 24.3 182 99-290 6-197 (318)
297 3s94_A LRP-6, low-density lipo 93.2 5.9 0.0002 37.8 25.0 198 86-295 40-248 (619)
298 3kya_A Putative phosphatase; s 93.2 5.4 0.00018 37.0 23.6 198 86-295 186-480 (496)
299 1n7d_A LDL receptor, low-densi 93.1 0.25 8.7E-06 48.1 8.5 180 99-290 379-571 (699)
300 4hw6_A Hypothetical protein, I 93.0 5 0.00017 36.3 23.1 192 86-289 182-432 (433)
301 4a0p_A LRP6, LRP-6, low-densit 92.7 7.3 0.00025 37.2 27.5 195 87-293 38-240 (628)
302 3kya_A Putative phosphatase; s 92.5 6.7 0.00023 36.4 23.0 202 87-292 140-411 (496)
303 2be1_A Serine/threonine-protei 92.4 0.33 1.1E-05 42.9 7.4 137 154-295 65-236 (339)
304 3ii7_A Kelch-like protein 7; p 91.6 5.6 0.00019 33.5 22.0 188 96-292 55-274 (306)
305 3sbq_A Nitrous-oxide reductase 91.4 6.9 0.00024 37.0 15.1 131 87-224 324-501 (638)
306 2vpj_A Kelch-like protein 12; 91.1 6.1 0.00021 33.1 20.8 187 96-292 14-233 (301)
307 4a0p_A LRP6, LRP-6, low-densit 91.0 11 0.00038 35.9 26.6 185 98-291 7-198 (628)
308 1zgk_A Kelch-like ECH-associat 90.9 6.7 0.00023 33.2 17.9 190 94-292 22-242 (308)
309 3ott_A Two-component system se 90.8 12 0.00042 36.1 22.9 187 86-292 63-262 (758)
310 2xn4_A Kelch-like protein 2; s 90.7 6.7 0.00023 32.9 20.1 187 96-292 61-278 (302)
311 3qqz_A Putative uncharacterize 90.5 7 0.00024 32.8 22.9 156 128-295 27-208 (255)
312 2xn4_A Kelch-like protein 2; s 90.5 7.1 0.00024 32.8 19.5 186 97-292 16-231 (302)
313 2uvk_A YJHT; unknown function, 90.3 8.3 0.00028 33.3 16.4 135 156-296 168-348 (357)
314 2vpj_A Kelch-like protein 12; 90.2 7.4 0.00025 32.6 21.6 188 96-292 62-280 (301)
315 3sre_A PON1, serum paraoxonase 90.0 9.6 0.00033 33.6 18.7 99 187-290 128-252 (355)
316 2xbg_A YCF48-like protein; pho 88.9 10 0.00036 32.5 22.8 186 86-287 122-319 (327)
317 1zgk_A Kelch-like ECH-associat 88.8 9.9 0.00034 32.1 17.4 188 96-292 70-289 (308)
318 2be1_A Serine/threonine-protei 87.2 1.8 6E-05 38.2 7.7 108 188-298 13-138 (339)
319 4gq2_M Nucleoporin NUP120; bet 86.6 0.85 2.9E-05 46.0 6.0 37 260-297 237-273 (950)
320 2xbg_A YCF48-like protein; pho 85.2 17 0.00058 31.1 22.6 183 86-287 36-231 (327)
321 3pbp_A Nucleoporin NUP82; beta 85.1 22 0.00076 32.3 19.1 105 91-203 26-158 (452)
322 4asc_A Kelch repeat and BTB do 84.9 17 0.00057 30.7 21.0 133 155-292 116-279 (315)
323 4fhn_B Nucleoporin NUP120; pro 84.7 0.71 2.4E-05 47.5 4.4 37 260-297 239-275 (1139)
324 2xzh_A Clathrin heavy chain 1; 84.5 21 0.0007 31.5 26.8 65 90-165 71-135 (365)
325 3f7f_A Nucleoporin NUP120; nuc 84.2 1.4 4.9E-05 42.7 5.9 36 259-297 222-257 (729)
326 2ism_A Putative oxidoreductase 82.3 24 0.00082 30.6 17.4 136 130-278 33-222 (352)
327 1bpo_A Protein (clathrin); cla 80.2 36 0.0012 31.2 26.4 65 90-165 70-134 (494)
328 3ii7_A Kelch-like protein 7; p 78.1 29 0.00098 28.9 20.0 184 98-292 13-227 (306)
329 3s25_A Hypothetical 7-bladed b 76.6 35 0.0012 29.1 16.0 171 93-279 21-204 (302)
330 2p9w_A MAL S 1 allergenic prot 75.4 41 0.0014 29.3 15.9 194 90-289 17-264 (334)
331 3a9g_A Putative uncharacterize 73.5 45 0.0015 28.9 18.0 136 130-277 31-216 (354)
332 4asc_A Kelch repeat and BTB do 73.5 40 0.0014 28.3 21.9 187 99-292 7-223 (315)
333 1tl2_A L10, protein (tachylect 69.7 36 0.0012 28.1 9.5 100 177-281 42-155 (236)
334 2woz_A Kelch repeat and BTB do 67.5 54 0.0019 27.4 21.0 193 92-292 52-289 (318)
335 2uvk_A YJHT; unknown function, 66.7 59 0.002 27.6 17.6 72 96-169 19-99 (357)
336 3das_A Putative oxidoreductase 66.1 67 0.0023 28.0 19.3 151 130-291 34-234 (347)
337 2zwa_A Leucine carboxyl methyl 66.0 95 0.0033 29.7 19.9 196 95-292 396-637 (695)
338 2ism_A Putative oxidoreductase 65.4 67 0.0023 27.7 19.1 22 259-280 315-337 (352)
339 3s94_A LRP-6, low-density lipo 63.7 1E+02 0.0034 29.1 25.5 195 86-292 349-553 (619)
340 2zwa_A Leucine carboxyl methyl 56.3 1.4E+02 0.0048 28.5 14.1 136 155-292 411-579 (695)
341 1tl2_A L10, protein (tachylect 55.2 19 0.00065 29.7 5.3 62 221-288 45-114 (236)
342 1cru_A Protein (soluble quinop 53.6 1.3E+02 0.0043 27.1 22.1 32 259-291 228-260 (454)
343 2woz_A Kelch repeat and BTB do 52.4 1E+02 0.0035 25.7 15.9 108 96-205 109-233 (318)
344 3f7f_A Nucleoporin NUP120; nuc 50.1 28 0.00095 33.8 6.3 34 134-174 226-259 (729)
345 3sbq_A Nitrous-oxide reductase 48.3 1.2E+02 0.0042 28.7 10.1 93 195-291 299-409 (638)
346 3das_A Putative oxidoreductase 45.9 34 0.0012 29.9 5.8 35 258-293 31-65 (347)
347 3q6k_A 43.2 kDa salivary prote 45.8 1.6E+02 0.0054 26.0 12.6 93 195-290 124-253 (381)
348 4gq2_M Nucleoporin NUP120; bet 44.2 43 0.0015 33.6 7.0 33 135-174 243-275 (950)
349 3a9g_A Putative uncharacterize 42.6 1.6E+02 0.0056 25.2 21.7 53 227-280 276-334 (354)
350 4fhn_B Nucleoporin NUP120; pro 34.3 45 0.0015 34.2 5.4 31 137-174 247-277 (1139)
351 1uhe_A Aspartate 1-decarboxyla 34.2 31 0.0011 24.1 2.9 17 281-297 17-33 (97)
352 2zux_A YESW protein; beta-prop 34.0 3E+02 0.01 25.8 21.4 133 157-297 230-407 (591)
353 1vc3_B L-aspartate-alpha-decar 33.7 32 0.0011 24.0 2.9 17 281-297 18-34 (96)
354 1cru_A Protein (soluble quinop 33.2 2E+02 0.0067 25.9 9.1 37 259-296 405-448 (454)
355 3plx_B Aspartate 1-decarboxyla 31.9 35 0.0012 24.1 2.9 17 281-297 18-34 (102)
356 3oug_A Aspartate 1-decarboxyla 28.1 44 0.0015 24.0 2.9 43 255-297 12-61 (114)
357 2g8s_A Glucose/sorbosone dehyd 28.0 1.9E+02 0.0066 24.7 7.8 53 228-281 289-346 (353)
358 2g8s_A Glucose/sorbosone dehyd 25.1 3.2E+02 0.011 23.3 16.9 18 259-276 197-215 (353)
359 3sre_A PON1, serum paraoxonase 25.0 3.4E+02 0.012 23.5 21.3 60 218-280 224-288 (355)
360 2wg3_C Hedgehog-interacting pr 24.5 3.9E+02 0.013 24.0 12.9 21 260-280 140-160 (463)
361 3jt0_A Lamin-B1; structural ge 23.7 2.3E+02 0.008 21.2 7.5 72 79-166 19-90 (144)
362 2lll_A Lamin-B2; immunoglobuli 23.6 2.3E+02 0.0079 21.1 7.1 71 80-165 16-86 (139)
363 1pqh_A Aspartate 1-decarboxyla 23.6 57 0.002 24.4 2.9 19 279-297 57-75 (143)
364 3qhy_B Beta-lactamase inhibito 23.1 3.2E+02 0.011 22.5 10.3 122 155-286 41-164 (282)
365 3c12_A FLGD, flagellar protein 22.7 1.6E+02 0.0056 21.6 5.5 73 195-273 42-121 (138)
366 4hvt_A Ritya.17583.B, post-pro 21.3 59 0.002 31.5 3.3 34 261-294 131-169 (711)
367 2c45_A Aspartate 1-decarboxyla 21.0 55 0.0019 24.4 2.3 18 280-297 41-58 (139)
368 3zwu_A Alkaline phosphatase PH 20.7 3.4E+02 0.011 25.5 8.3 36 241-276 511-548 (592)
No 1
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.98 E-value=2.3e-30 Score=234.54 Aligned_cols=200 Identities=30% Similarity=0.486 Sum_probs=171.2
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEE
Q 022387 82 SSPPPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIW 161 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasgs~~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iW 161 (298)
..|...|++++|+|||++||+|++++++||++++.+......+ +++..+.+.++++.+++++++ |++|+||
T Consensus 16 ~~h~~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~------d~~v~iW 86 (355)
T 3vu4_A 16 NHVSNPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEM---RHLSKVRMLHRTNYVAFVTGV------KEVVHIW 86 (355)
T ss_dssp ---CCCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEEEEEC---SCCCEEEECTTSSEEEEECSS------TTEEEEE
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCEEEEEecCCcceeeeeec---CCeEEEEEcCCCCEEEEEECC------ccEEEEE
Confidence 4577899999999999999999999999999998877666553 468888899999988887754 5899999
Q ss_pred eCCCCcEEEEeecCCceEEEEEeCCeEEEEECCeEEEEEcCCC-eEEEEEeccCCCcceEEEEeCCCCeEEEEe-cCCCc
Q 022387 162 DDHQSRCIGELSFRSEVRSVKLRRDRIIVVLEQKIFVYNFADL-KLLHQIETIANPKGLCAVSQGVGSLVLVCP-GLQKG 239 (298)
Q Consensus 162 D~~~~~~~~~~~~~~~v~~v~~~~~~l~v~~~~~I~iwd~~~~-~~i~~~~~~~~~~~~~~~s~~~d~~~la~s-Gs~dg 239 (298)
|..+++.+.++.+...|.++.++++.++++.++.|++||+.+. +.++++.. +...+++++ .++|++ |+.+|
T Consensus 87 d~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~----~~la~~sg~~~g 159 (355)
T 3vu4_A 87 DDVKKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIR---FGGVCEFSN----GLLVYSNEFNLG 159 (355)
T ss_dssp ETTTTEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEE---EEEEEEEET----TEEEEEESSCTT
T ss_pred ECCCCcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEecc---CCceEEEEc----cEEEEeCCCcCc
Confidence 9999999999999999999999999999999999999999887 77766665 556777776 455555 89999
Q ss_pred eEEEEEcCCcc-----------------eEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 240 QVRVEHYASKR-----------------TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 240 ~v~i~~~~~~~-----------------~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
.|++||+.... +..+.+|...|++|+|+|+|++|||||.|+++|||||++++++++++
T Consensus 160 ~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~ 234 (355)
T 3vu4_A 160 QIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREF 234 (355)
T ss_dssp CEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEE
T ss_pred EEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence 99999998754 67889999999999999999999999999965999999999998775
No 2
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.97 E-value=3.9e-30 Score=232.62 Aligned_cols=201 Identities=8% Similarity=-0.010 Sum_probs=163.1
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCC-EEEEEeCCCCCCCCCCeEE
Q 022387 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCN-ILALVGGGPDPQYPLNKVM 159 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~v~ 159 (298)
..|...|++|+|+|||++||+|+.++ |+|||+.+.+.+..... |.+.+..+.+.+++. .++.++ .|++|+
T Consensus 124 ~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~-h~~~V~~~~~~~~~~~~l~s~s-------~D~~v~ 195 (344)
T 4gqb_B 124 YEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRA-HAAQVTCVAASPHKDSVFLSCS-------EDNRIL 195 (344)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECSSCTTEEEEEE-------TTSCEE
T ss_pred cCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC-cCCceEEEEecCCCCCceeeec-------cccccc
Confidence 46888999999999999999999866 89999999887666554 678888888887764 556665 689999
Q ss_pred EEeCCCCcEEEEeecC---CceEEEEEeCC---eEEEEE-CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEE
Q 022387 160 IWDDHQSRCIGELSFR---SEVRSVKLRRD---RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLV 232 (298)
Q Consensus 160 iWD~~~~~~~~~~~~~---~~v~~v~~~~~---~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la 232 (298)
|||+++++.+..+... ..+.++.|+++ .++++. ++.|++||++++++++++..|...+..++|++++. .+||
T Consensus 196 iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~-~~la 274 (344)
T 4gqb_B 196 LWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSV-PFLA 274 (344)
T ss_dssp EEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSS-CCEE
T ss_pred cccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCC-eEEE
Confidence 9999999888776533 36888999863 344444 58999999999999999999988887777776542 4565
Q ss_pred EecCCCceEEEEEcCCcceEeecccccceeEEEECCCCC-EEEEEeCCCCEEEEEECCCCcE
Q 022387 233 CPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQ-LLATSSTKGTLVRIFNTLDGTL 293 (298)
Q Consensus 233 ~sGs~dg~v~i~~~~~~~~~~~~~H~~~V~~l~fspdg~-~lAt~S~Dgt~IrIWd~~tg~~ 293 (298)
+|+.||.|+|||...+++..+.+|.+.|++|+|+|+++ +|||||.|++ |++|++.+..+
T Consensus 275 -sgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~-v~~w~v~~~~~ 334 (344)
T 4gqb_B 275 -SLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQ-VVHHVVPTEPL 334 (344)
T ss_dssp -EEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSC-EEEEECCC---
T ss_pred -EEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCe-EEEEECCCCCC
Confidence 59999999999999988888999999999999999985 6889999999 99999987654
No 3
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.97 E-value=1.8e-29 Score=223.47 Aligned_cols=206 Identities=10% Similarity=0.082 Sum_probs=171.4
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEE
Q 022387 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i 160 (298)
..|..+|.+++|+|++++|++|+.++ ++|||+.+.+.+..... |...+..+.+.+++..+++++ .|++|++
T Consensus 52 ~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~sgs-------~D~~v~l 123 (304)
T 2ynn_A 52 QVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEA-HPDYIRSIAVHPTKPYVLSGS-------DDLTVKL 123 (304)
T ss_dssp ECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECSSSSEEEEEE-------TTSCEEE
T ss_pred eccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeC-CCCcEEEEEEcCCCCEEEEEC-------CCCeEEE
Confidence 35667899999999999999999865 88999999887666654 678899999999998888877 7899999
Q ss_pred EeCCCCc-EEEEeec-CCceEEEEEeCC---eEEEEE-CCeEEEEEcCCCeEEEEEec-cCCCcceEEEEeCCCCeEEEE
Q 022387 161 WDDHQSR-CIGELSF-RSEVRSVKLRRD---RIIVVL-EQKIFVYNFADLKLLHQIET-IANPKGLCAVSQGVGSLVLVC 233 (298)
Q Consensus 161 WD~~~~~-~~~~~~~-~~~v~~v~~~~~---~l~v~~-~~~I~iwd~~~~~~i~~~~~-~~~~~~~~~~s~~~d~~~la~ 233 (298)
||++++. ....+.. ...|.++.|++. .++++. +++|++||+++.+....+.. +...+..+++++.+++.+|+
T Consensus 124 Wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~- 202 (304)
T 2ynn_A 124 WNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMI- 202 (304)
T ss_dssp EEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEE-
T ss_pred EECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEE-
Confidence 9999874 4445554 458999999872 455554 58999999988776666654 44566777888877778888
Q ss_pred ecCCCceEEEEEcCCcc-eEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 234 PGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 234 sGs~dg~v~i~~~~~~~-~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
+|+.||.|++||+.... +.++.+|...|++++|+|++++|||||.||+ |||||++++++++++
T Consensus 203 s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~-i~iWd~~~~~~~~~~ 266 (304)
T 2ynn_A 203 TASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGT-LKIWNSSTYKVEKTL 266 (304)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSC-EEEEETTTCCEEEEE
T ss_pred EEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCe-EEEEECCCCceeeec
Confidence 59999999999998765 4589999999999999999999999999999 999999999988775
No 4
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.97 E-value=2e-29 Score=227.88 Aligned_cols=203 Identities=14% Similarity=0.172 Sum_probs=158.5
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcC-CeEEEEEcCCCceEEEEee---ecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeE
Q 022387 83 SPPPTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDF---ERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKV 158 (298)
Q Consensus 83 ~~~~~V~~v~fs~dg~~lasgs~-~gi~vw~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v 158 (298)
.++..|.+++|+||+. |++|+. +.|+|||+++.+......+ .|.+.+..+.+++++..+++++ .|++|
T Consensus 80 ~~~~~v~~~~~s~d~~-l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs-------~d~~i 151 (344)
T 4gqb_B 80 QTEAGVADLTWVGERG-ILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGS-------KDICI 151 (344)
T ss_dssp EESSCEEEEEEETTTE-EEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEE-------TTSCE
T ss_pred ccCCCEEEEEEeCCCe-EEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEe-------CCCeE
Confidence 3456899999999975 566666 4589999998775443322 2678899999999999988887 78999
Q ss_pred EEEeCCCCcEEEEeecC-CceEEEEEeCC---eEEEEE-CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCC-CeEEE
Q 022387 159 MIWDDHQSRCIGELSFR-SEVRSVKLRRD---RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVG-SLVLV 232 (298)
Q Consensus 159 ~iWD~~~~~~~~~~~~~-~~v~~v~~~~~---~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d-~~~la 232 (298)
++||+++++++..+..+ ..|.++.|+++ .++.+. +++|++||+++++.+.++..+.......++.+.++ +.++|
T Consensus 152 ~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~ 231 (344)
T 4gqb_B 152 KVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFV 231 (344)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEE
T ss_pred EEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceE
Confidence 99999999999888754 58999999864 344444 58999999999998888765443333444444443 35666
Q ss_pred EecCCCceEEEEEcCCcc-eEeecccccceeEEEECCCC-CEEEEEeCCCCEEEEEECCCCcEEE
Q 022387 233 CPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDG-QLLATSSTKGTLVRIFNTLDGTLLQ 295 (298)
Q Consensus 233 ~sGs~dg~v~i~~~~~~~-~~~~~~H~~~V~~l~fspdg-~~lAt~S~Dgt~IrIWd~~tg~~l~ 295 (298)
+|+.||.|++||+.... +.++.+|...|++|+|+|+| ++|||||.|++ |||||++++++++
T Consensus 232 -sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~-i~vwd~~~~~~~~ 294 (344)
T 4gqb_B 232 -FGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCS-LAVLDSSLSELFR 294 (344)
T ss_dssp -EEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSC-EEEECTTCCEEEE
T ss_pred -EeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCe-EEEEECCCCcEEE
Confidence 59999999999997654 56899999999999999998 68999999999 9999999998764
No 5
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.97 E-value=1.4e-28 Score=221.18 Aligned_cols=205 Identities=13% Similarity=0.147 Sum_probs=170.2
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEE
Q 022387 81 SSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (298)
Q Consensus 81 ~~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~ 159 (298)
...|...|++++|+|||++|++|+.|+ ++|||+.+.+....... |...+..+.+.+++..+++++ .|+.|+
T Consensus 51 l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~-------~d~~v~ 122 (340)
T 1got_B 51 LRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPL-RSSWVMTCAYAPSGNYVACGG-------LDNICS 122 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC-SSSCEEEEEECTTSSEEEEEE-------TTCEEE
T ss_pred ecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeec-CCccEEEEEECCCCCEEEEEe-------CCCeEE
Confidence 467888999999999999999999865 88999998887766655 677888899999999888887 689999
Q ss_pred EEeCCCCc----EEEEeec-CCceEEEEEeCCe-EEEEE-CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEE
Q 022387 160 IWDDHQSR----CIGELSF-RSEVRSVKLRRDR-IIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLV 232 (298)
Q Consensus 160 iWD~~~~~----~~~~~~~-~~~v~~v~~~~~~-l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la 232 (298)
+||+.++. ....+.. ...|.++.|+++. ++++. +++|++||+.+++.+.++..|...+..+++++ ++.+++
T Consensus 123 iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~ 200 (340)
T 1got_B 123 IYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP--DTRLFV 200 (340)
T ss_dssp EEETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT--TSSEEE
T ss_pred EEECccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECC--CCCEEE
Confidence 99998753 3344443 4578889887654 44343 58999999999999999998887766666655 457777
Q ss_pred EecCCCceEEEEEcCCcc-eEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 233 CPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 233 ~sGs~dg~v~i~~~~~~~-~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
+|+.||.|++||+.... ..++.+|...|++|+|+|+|++||+||.||+ |+|||+++++.+.++
T Consensus 201 -sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~-v~iwd~~~~~~~~~~ 264 (340)
T 1got_B 201 -SGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDAT-CRLFDLRADQELMTY 264 (340)
T ss_dssp -EEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTTTEEEEEE
T ss_pred -EEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCc-EEEEECCCCcEEEEE
Confidence 59999999999998765 4589999999999999999999999999999 999999999887654
No 6
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.97 E-value=1.3e-28 Score=220.05 Aligned_cols=204 Identities=17% Similarity=0.166 Sum_probs=173.6
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEE
Q 022387 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i 160 (298)
..|...|.+++|++++.++++|+.|+ ++|||+.+.+.+..... +...+..+.+.+++..+++++ .+++|++
T Consensus 77 ~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~-~~~~~~~~~~spdg~~l~~g~-------~dg~v~i 148 (321)
T 3ow8_A 77 EGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDA-GPVDAWTLAFSPDSQYLATGT-------HVGKVNI 148 (321)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEEC-CTTCCCCEEECTTSSEEEEEC-------TTSEEEE
T ss_pred ccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeC-CCccEEEEEECCCCCEEEEEc-------CCCcEEE
Confidence 46778999999999999999999755 88999999887665553 455667788888888888877 6799999
Q ss_pred EeCCCCcEEEEeecC-CceEEEEEeCC--eEEEEE-CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEecC
Q 022387 161 WDDHQSRCIGELSFR-SEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGL 236 (298)
Q Consensus 161 WD~~~~~~~~~~~~~-~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs 236 (298)
||+++++....+..+ ..|.+++|+++ .++++. ++.|++||+++++++.++..|..++..++|+++ +.+|+ +|+
T Consensus 149 ~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd--~~~l~-s~s 225 (321)
T 3ow8_A 149 FGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPD--SQLLV-TAS 225 (321)
T ss_dssp EETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTT--SCEEE-EEC
T ss_pred EEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCC--CCEEE-EEc
Confidence 999999888777655 47899999875 455544 589999999999999999998888877777765 47887 599
Q ss_pred CCceEEEEEcCCcc-eEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 237 QKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 237 ~dg~v~i~~~~~~~-~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
.||.|++|++.... ..++.+|...|++++|+|+|++||++|.|++ |+|||++++++++++
T Consensus 226 ~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~-v~iwd~~~~~~~~~~ 286 (321)
T 3ow8_A 226 DDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKS-VKVWDVGTRTCVHTF 286 (321)
T ss_dssp TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTTTEEEEEE
T ss_pred CCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCc-EEEEeCCCCEEEEEE
Confidence 99999999998665 4588999999999999999999999999999 999999999998876
No 7
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.97 E-value=1.4e-28 Score=217.82 Aligned_cols=205 Identities=11% Similarity=0.128 Sum_probs=168.5
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEE
Q 022387 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i 160 (298)
..|...|++++|+|||++||+|+.++ ++|||+++...+..... |...+..+.+.++++.+++++ .|++|++
T Consensus 10 ~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~s-------~d~~i~v 81 (304)
T 2ynn_A 10 SNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQV-TETPVRAGKFIARKNWIIVGS-------DDFRIRV 81 (304)
T ss_dssp EEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEEEGGGTEEEEEE-------TTSEEEE
T ss_pred cCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeec-cCCcEEEEEEeCCCCEEEEEC-------CCCEEEE
Confidence 46778999999999999999999865 88999999877666554 577888999999999988888 7899999
Q ss_pred EeCCCCcEEEEeecC-CceEEEEEeCC--eEEEEE-CCeEEEEEcCCC-eEEEEEeccCCCcceEEEEeCCCCeEEEEec
Q 022387 161 WDDHQSRCIGELSFR-SEVRSVKLRRD--RIIVVL-EQKIFVYNFADL-KLLHQIETIANPKGLCAVSQGVGSLVLVCPG 235 (298)
Q Consensus 161 WD~~~~~~~~~~~~~-~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~-~~i~~~~~~~~~~~~~~~s~~~d~~~la~sG 235 (298)
||+.+++.+..+..+ ..|.+++|+++ .++++. +++|++||+++. .+...+..|...+.+++|++. ++.+|| +|
T Consensus 82 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~-~~~~l~-sg 159 (304)
T 2ynn_A 82 FNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPK-DPSTFA-SG 159 (304)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTT-CTTEEE-EE
T ss_pred EECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCC-CCCEEE-EE
Confidence 999999998888755 57999999975 444444 589999999766 566677888887777777663 235666 59
Q ss_pred CCCceEEEEEcCCcc-eE-eecccccceeEEEECC--CCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 236 LQKGQVRVEHYASKR-TK-FIMAHDSRIACFALTQ--DGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 236 s~dg~v~i~~~~~~~-~~-~~~~H~~~V~~l~fsp--dg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
+.||.|++||+.... .. ....|...|..++|+| ++++||+||.|++ |||||+++++++.++
T Consensus 160 s~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~-i~iWd~~~~~~~~~~ 224 (304)
T 2ynn_A 160 CLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLT-IKIWDYQTKSCVATL 224 (304)
T ss_dssp ETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSE-EEEEETTTTEEEEEE
T ss_pred eCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCe-EEEEeCCCCccceee
Confidence 999999999987543 23 3456778999999986 7889999999999 999999999988765
No 8
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.97 E-value=1.3e-28 Score=227.13 Aligned_cols=205 Identities=13% Similarity=0.185 Sum_probs=173.9
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEE
Q 022387 81 SSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (298)
Q Consensus 81 ~~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~ 159 (298)
...|..+|++++|+|++.+|++|+.|+ |+|||+.+.+....... |.+.+..+.+.+++..+++++ .|++|+
T Consensus 104 l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~-h~~~V~~v~~~~~~~~l~sgs-------~D~~i~ 175 (410)
T 1vyh_C 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKG-HTDSVQDISFDHSGKLLASCS-------ADMTIK 175 (410)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECC-CSSCEEEEEECTTSSEEEEEE-------TTSCCC
T ss_pred ecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEec-cCCcEEEEEEcCCCCEEEEEe-------CCCeEE
Confidence 357889999999999999999999865 88999998877655554 677889999998888888887 789999
Q ss_pred EEeCCCCcEEEEeecC-CceEEEEEeCC--eEEEEE-CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEec
Q 022387 160 IWDDHQSRCIGELSFR-SEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPG 235 (298)
Q Consensus 160 iWD~~~~~~~~~~~~~-~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sG 235 (298)
|||+.+++++..+..+ ..|.++.|+++ .++++. +++|++||+++++++.++..|...+..+.+ ++++.+++ +|
T Consensus 176 iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~--~~~g~~l~-s~ 252 (410)
T 1vyh_C 176 LWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP--NQDGTLIA-SC 252 (410)
T ss_dssp EEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--CTTSSEEE-EE
T ss_pred EEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEE--CCCCCEEE-EE
Confidence 9999999988887654 58999999875 455554 589999999999999999988776655555 45558888 59
Q ss_pred CCCceEEEEEcCCcce-EeecccccceeEEEECCC--------------------CCEEEEEeCCCCEEEEEECCCCcEE
Q 022387 236 LQKGQVRVEHYASKRT-KFIMAHDSRIACFALTQD--------------------GQLLATSSTKGTLVRIFNTLDGTLL 294 (298)
Q Consensus 236 s~dg~v~i~~~~~~~~-~~~~~H~~~V~~l~fspd--------------------g~~lAt~S~Dgt~IrIWd~~tg~~l 294 (298)
+.||.|++|++..... ..+.+|...|++++|+|+ |.+||+|+.|++ |+|||+++++++
T Consensus 253 s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~-i~iwd~~~~~~~ 331 (410)
T 1vyh_C 253 SNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT-IKMWDVSTGMCL 331 (410)
T ss_dssp ETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSE-EEEEETTTTEEE
T ss_pred cCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCe-EEEEECCCCceE
Confidence 9999999999987654 478999999999999997 779999999999 999999999988
Q ss_pred Eec
Q 022387 295 QEG 297 (298)
Q Consensus 295 ~~~ 297 (298)
.++
T Consensus 332 ~~~ 334 (410)
T 1vyh_C 332 MTL 334 (410)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 9
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.97 E-value=4.1e-29 Score=226.55 Aligned_cols=200 Identities=12% Similarity=0.049 Sum_probs=163.4
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCC-EEEEEeCCCCCCCCCCeEE
Q 022387 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCN-ILALVGGGPDPQYPLNKVM 159 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~v~ 159 (298)
..|...|++++|+|||++|++|+.++ |+|||+.+.+.+..... |...+..+.+.++.. .+++++ .|++|+
T Consensus 136 ~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~-h~~~v~~v~~s~~~~~~~~s~~-------~dg~v~ 207 (357)
T 4g56_B 136 YEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNA-HSSEVNCVAACPGKDTIFLSCG-------EDGRIL 207 (357)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTCSSCEEEEE-------TTSCEE
T ss_pred CCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC-CCCCEEEEEEccCCCceeeeec-------cCCceE
Confidence 46788999999999999999999865 89999999887666554 677888888887765 555655 679999
Q ss_pred EEeCCCCcEEEEeec---CCceEEEEEeCC---eEEEEE-CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEE
Q 022387 160 IWDDHQSRCIGELSF---RSEVRSVKLRRD---RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLV 232 (298)
Q Consensus 160 iWD~~~~~~~~~~~~---~~~v~~v~~~~~---~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la 232 (298)
+||+++++.+..+.. ...+.++.|+++ .++++. ++.|++||++++++++++..|...+..++|++++ ..+||
T Consensus 208 ~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~-~~~la 286 (357)
T 4g56_B 208 LWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHS-SPFLA 286 (357)
T ss_dssp ECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSS-SCCEE
T ss_pred EEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCC-CCEEE
Confidence 999999887666543 346899999864 344444 5799999999999999999888887777777653 24566
Q ss_pred EecCCCceEEEEEcCCcceEeecccccceeEEEECC-CCCEEEEEeCCCCEEEEEECCCCc
Q 022387 233 CPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQ-DGQLLATSSTKGTLVRIFNTLDGT 292 (298)
Q Consensus 233 ~sGs~dg~v~i~~~~~~~~~~~~~H~~~V~~l~fsp-dg~~lAt~S~Dgt~IrIWd~~tg~ 292 (298)
+|+.||.|+|||.++.++....+|...|++|+||| |+++|||+|.||+ |+|||+.+..
T Consensus 287 -sgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~-v~iW~~~~~~ 345 (357)
T 4g56_B 287 -SISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHK-VLHHHLPSEG 345 (357)
T ss_dssp -EEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSC-EEEEECC---
T ss_pred -EEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCCCe-EEEEECCCCC
Confidence 59999999999999888777779999999999998 8999999999999 9999997643
No 10
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.97 E-value=9.4e-29 Score=228.15 Aligned_cols=207 Identities=12% Similarity=0.195 Sum_probs=175.0
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEE
Q 022387 81 SSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (298)
Q Consensus 81 ~~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~ 159 (298)
...|...|++++|+|+|++||+|+.|+ ++|||+.+.+.+..... |.+.+..+.+.++++.+++++ .|++|+
T Consensus 146 l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~-h~~~V~~v~~~p~~~~l~s~s-------~D~~i~ 217 (410)
T 1vyh_C 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHG-HDHNVSSVSIMPNGDHIVSAS-------RDKTIK 217 (410)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCC-CSSCEEEEEECSSSSEEEEEE-------TTSEEE
T ss_pred EeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcC-CCCCEEEEEEeCCCCEEEEEe-------CCCeEE
Confidence 356888999999999999999999866 88999988776554443 677889999998888888877 789999
Q ss_pred EEeCCCCcEEEEeecC-CceEEEEEeCC--eEEEEE-CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCC--------
Q 022387 160 IWDDHQSRCIGELSFR-SEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVG-------- 227 (298)
Q Consensus 160 iWD~~~~~~~~~~~~~-~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d-------- 227 (298)
+||++++.++..+..+ ..|.++.++++ .++++. +++|++||+.+.+...++..|...+.+++++++..
T Consensus 218 ~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~ 297 (410)
T 1vyh_C 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEAT 297 (410)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCC
T ss_pred EEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhc
Confidence 9999999998888755 47889999875 344444 58999999999999999999988888888877531
Q ss_pred ----------CeEEEEecCCCceEEEEEcCCcc-eEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEe
Q 022387 228 ----------SLVLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQE 296 (298)
Q Consensus 228 ----------~~~la~sGs~dg~v~i~~~~~~~-~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~ 296 (298)
+.+|+ +|+.||.|++||+.... +.++.+|...|++|+|+|+|++|++||.||+ |+|||+.+++++++
T Consensus 298 ~~~~~~~~~~g~~l~-sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~-i~vwd~~~~~~~~~ 375 (410)
T 1vyh_C 298 GSETKKSGKPGPFLL-SGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKT-LRVWDYKNKRCMKT 375 (410)
T ss_dssp SCC-------CCEEE-EEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTE-EEEECCTTSCCCEE
T ss_pred cccccccCCCCCEEE-EEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCe-EEEEECCCCceEEE
Confidence 45677 59999999999998764 5588999999999999999999999999999 99999999988766
Q ss_pred c
Q 022387 297 G 297 (298)
Q Consensus 297 ~ 297 (298)
+
T Consensus 376 ~ 376 (410)
T 1vyh_C 376 L 376 (410)
T ss_dssp E
T ss_pred E
Confidence 4
No 11
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.97 E-value=3e-28 Score=217.72 Aligned_cols=206 Identities=15% Similarity=0.204 Sum_probs=167.0
Q ss_pred cCCCCCCeEEEEEcCC----CCEEEEEcCCe-EEEEEcCCCceEEEEeee-cCCceEEEEEecCCCEEEEEeCCCCCCCC
Q 022387 81 SSSPPPTLLHISFNQD----HGCFAAGTDHG-FRIYNCDPFREIFRRDFE-RGGGIGVVEMLFRCNILALVGGGPDPQYP 154 (298)
Q Consensus 81 ~~~~~~~V~~v~fs~d----g~~lasgs~~g-i~vw~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (298)
...|...|.+|+|+++ +++|++|+.|+ ++||++...+......+. |...+..+.+..+...+++++ .
T Consensus 28 ~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s-------~ 100 (321)
T 3ow8_A 28 EQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSS-------L 100 (321)
T ss_dssp TTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEE-------T
T ss_pred cccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEe-------C
Confidence 3578899999999974 67999999855 899999877654444332 667788888888888888777 7
Q ss_pred CCeEEEEeCCCCcEEEEeecC-CceEEEEEeCC--eEEEEE-CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeE
Q 022387 155 LNKVMIWDDHQSRCIGELSFR-SEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLV 230 (298)
Q Consensus 155 d~~v~iWD~~~~~~~~~~~~~-~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~ 230 (298)
|++|++||+.+++.+..+..+ ..+.++.|+++ .++++. ++.|++||+.+++...++..+...+..+++++ ++.+
T Consensus 101 D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~sp--dg~~ 178 (321)
T 3ow8_A 101 DAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSP--DGKY 178 (321)
T ss_dssp TSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECT--TSSE
T ss_pred CCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECC--CCCE
Confidence 899999999999988887754 47888999875 344443 48999999999998888888766665555554 5588
Q ss_pred EEEecCCCceEEEEEcCCcc-eEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 231 LVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 231 la~sGs~dg~v~i~~~~~~~-~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
|| +|+.||.|++||+.+.. +.++.+|..+|++|+|+|+|++||+|+.|++ |+|||+++++++.++
T Consensus 179 la-sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~-i~iwd~~~~~~~~~~ 244 (321)
T 3ow8_A 179 LA-SGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGY-IKIYDVQHANLAGTL 244 (321)
T ss_dssp EE-EEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSC-EEEEETTTCCEEEEE
T ss_pred EE-EEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCe-EEEEECCCcceeEEE
Confidence 88 49999999999998765 4588999999999999999999999999999 999999999887664
No 12
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.97 E-value=8.1e-28 Score=217.68 Aligned_cols=207 Identities=10% Similarity=0.082 Sum_probs=172.6
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEE
Q 022387 81 SSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (298)
Q Consensus 81 ~~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~ 159 (298)
...|...|++++|+|||++||+|+.|+ ++|||..+.+....... |...+..+.+.+++..+++++ .|++++
T Consensus 60 l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~-~~~~v~~~~~sp~g~~lasg~-------~d~~i~ 131 (354)
T 2pbi_B 60 LKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTM-PCTWVMACAYAPSGCAIACGG-------LDNKCS 131 (354)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC-SSSCCCEEEECTTSSEEEEES-------TTSEEE
T ss_pred ecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEec-CCCCEEEEEECCCCCEEEEee-------CCCCEE
Confidence 357889999999999999999999866 88999988877666554 566788888999998888877 689999
Q ss_pred EEeCCCC------cEEEEee-cCCceEEEEEeCC--eEEEEE-CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCe
Q 022387 160 IWDDHQS------RCIGELS-FRSEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSL 229 (298)
Q Consensus 160 iWD~~~~------~~~~~~~-~~~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~ 229 (298)
+|++... .....+. +...|.++.|+++ .++++. +++|++||+.+++++.++..|...+.++++++++++.
T Consensus 132 v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~ 211 (354)
T 2pbi_B 132 VYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGN 211 (354)
T ss_dssp EEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCC
T ss_pred EEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCC
Confidence 9998643 1223333 4457899999875 455554 5899999999999999999998888888888877777
Q ss_pred EEEEecCCCceEEEEEcCCcc-eEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 230 VLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 230 ~la~sGs~dg~v~i~~~~~~~-~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
+|+ +|+.||.|++||+.... +..+.+|...|++++|+|+|.+|||||.|++ |||||+++++.+..+
T Consensus 212 ~l~-sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~-v~lwd~~~~~~~~~~ 278 (354)
T 2pbi_B 212 TFV-SGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDAT-CRLYDLRADREVAIY 278 (354)
T ss_dssp EEE-EEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTTTEEEEEE
T ss_pred EEE-EEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCe-EEEEECCCCcEEEEE
Confidence 887 59999999999998765 4578999999999999999999999999999 999999998776543
No 13
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.97 E-value=7.3e-28 Score=214.70 Aligned_cols=207 Identities=12% Similarity=0.112 Sum_probs=166.7
Q ss_pred cCCCCCCeEEEEEcCCC-CEEEEEcCCe-EEEEEcCCCceE---EEEeee-cCCceEEEEEecCCCEEEEEeCCCCCCCC
Q 022387 81 SSSPPPTLLHISFNQDH-GCFAAGTDHG-FRIYNCDPFREI---FRRDFE-RGGGIGVVEMLFRCNILALVGGGPDPQYP 154 (298)
Q Consensus 81 ~~~~~~~V~~v~fs~dg-~~lasgs~~g-i~vw~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (298)
...|...|++++|+|++ ++|++|+.|+ +++|++...... ....+. |.+.+..+.+.+++..+++++ .
T Consensus 13 l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s-------~ 85 (319)
T 3frx_A 13 LEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSAS-------W 85 (319)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEE-------T
T ss_pred EccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEe-------C
Confidence 35788999999999965 8999999865 889998643211 112221 678888899999999988888 7
Q ss_pred CCeEEEEeCCCCcEEEEeecC-CceEEEEEeCC--eEEEEE-CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCC----
Q 022387 155 LNKVMIWDDHQSRCIGELSFR-SEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGV---- 226 (298)
Q Consensus 155 d~~v~iWD~~~~~~~~~~~~~-~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~---- 226 (298)
|++|+|||+++++.+..+..+ ..|.++.|+++ .++++. +++|++||++ .+.+.++..|...+..+.+.+..
T Consensus 86 D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~ 164 (319)
T 3frx_A 86 DKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADD 164 (319)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC-----
T ss_pred CCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCC
Confidence 899999999999998888754 58999999875 344444 5899999996 45677888888877777776643
Q ss_pred CCeEEEEecCCCceEEEEEcCCcce-EeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 227 GSLVLVCPGLQKGQVRVEHYASKRT-KFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 227 d~~~la~sGs~dg~v~i~~~~~~~~-~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
++.+++ +|+.||.|++|++..... ..+.+|...|++++|+|+|++||+|+.||+ |+|||+.++++++++
T Consensus 165 ~~~~l~-s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~-i~iwd~~~~~~~~~~ 234 (319)
T 3frx_A 165 DSVTII-SAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGE-IMLWNLAAKKAMYTL 234 (319)
T ss_dssp -CCEEE-EEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCE-EEEEETTTTEEEEEE
T ss_pred CccEEE-EEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCe-EEEEECCCCcEEEEe
Confidence 334666 599999999999987654 478899999999999999999999999999 999999999988764
No 14
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.96 E-value=2.1e-27 Score=209.97 Aligned_cols=204 Identities=14% Similarity=0.219 Sum_probs=170.8
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEE
Q 022387 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i 160 (298)
..|...|++++|+|+|++||+|+.++ ++||+..+.+....... |...+..+.+.++++.+++++ .|+.|++
T Consensus 20 ~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~-------~d~~i~v 91 (312)
T 4ery_A 20 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWSSDSNLLVSAS-------DDKTLKI 91 (312)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEE-------TTSEEEE
T ss_pred cccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhcc-CCCceEEEEEcCCCCEEEEEC-------CCCEEEE
Confidence 57888999999999999999999865 88999988776555443 677888999999999888887 6899999
Q ss_pred EeCCCCcEEEEeecC-CceEEEEEeCC--eEEEEE-CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEecC
Q 022387 161 WDDHQSRCIGELSFR-SEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGL 236 (298)
Q Consensus 161 WD~~~~~~~~~~~~~-~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs 236 (298)
||+++++++..+..+ ..|.++.|+++ .++++. ++.|++||+++++.+..+..|..++..+++++ ++.+++ +|+
T Consensus 92 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~-~~~ 168 (312)
T 4ery_A 92 WDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR--DGSLIV-SSS 168 (312)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT--TSSEEE-EEE
T ss_pred EECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcC--CCCEEE-EEe
Confidence 999999998888754 57999999875 455444 58999999999999999988877776666655 457777 489
Q ss_pred CCceEEEEEcCCcce-Ee-ecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 237 QKGQVRVEHYASKRT-KF-IMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 237 ~dg~v~i~~~~~~~~-~~-~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
.||.|++||...... .. ...|...|.+++|+|+|++|++++.|+. |+|||++++++++++
T Consensus 169 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~-i~iwd~~~~~~~~~~ 230 (312)
T 4ery_A 169 YDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT-LKLWDYSKGKCLKTY 230 (312)
T ss_dssp TTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTE-EEEEETTTTEEEEEE
T ss_pred CCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCe-EEEEECCCCcEEEEE
Confidence 999999999987653 33 3467788999999999999999999999 999999999988765
No 15
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.96 E-value=4e-27 Score=215.85 Aligned_cols=199 Identities=16% Similarity=0.187 Sum_probs=163.7
Q ss_pred CeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCC
Q 022387 87 TLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ 165 (298)
Q Consensus 87 ~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~ 165 (298)
.|++++|+|||++||+|+.++ |+|||+++.+....... |...+..+.+.+++..+++++ .|++|++||+++
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~s~s-------~d~~v~iwd~~~ 196 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQG-HEQDIYSLDYFPSGDKLVSGS-------GDRTVRIWDLRT 196 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEE-------TTSEEEEEETTT
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcc-CCCCEEEEEEcCCCCEEEEec-------CCCcEEEEECCC
Confidence 599999999999999999865 88999998877655543 677889999998998888877 689999999999
Q ss_pred CcEEEEeecCCceEEEEEeC-C--eEEEEE-CCeEEEEEcCCCeEEEEEe-------ccCCCcceEEEEeCCCCeEEEEe
Q 022387 166 SRCIGELSFRSEVRSVKLRR-D--RIIVVL-EQKIFVYNFADLKLLHQIE-------TIANPKGLCAVSQGVGSLVLVCP 234 (298)
Q Consensus 166 ~~~~~~~~~~~~v~~v~~~~-~--~l~v~~-~~~I~iwd~~~~~~i~~~~-------~~~~~~~~~~~s~~~d~~~la~s 234 (298)
+++...+.+...+.++.+++ + .++++. ++.|++||+++++.+..+. .|...+..++| ++++.+|+ +
T Consensus 197 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~--~~~g~~l~-s 273 (393)
T 1erj_A 197 GQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVF--TRDGQSVV-S 273 (393)
T ss_dssp TEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEE--CTTSSEEE-E
T ss_pred CeeEEEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEE--CCCCCEEE-E
Confidence 99988888888899999986 3 455544 5899999999988887773 45455555555 45568887 5
Q ss_pred cCCCceEEEEEcCCc-------------ceEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 235 GLQKGQVRVEHYASK-------------RTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 235 Gs~dg~v~i~~~~~~-------------~~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
|+.||.|++|++... ....+.+|...|.+++|+|++++||+||.|++ |+|||+++++++.++
T Consensus 274 ~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~-v~iwd~~~~~~~~~l 348 (393)
T 1erj_A 274 GSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRG-VLFWDKKSGNPLLML 348 (393)
T ss_dssp EETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSE-EEEEETTTCCEEEEE
T ss_pred EeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCe-EEEEECCCCeEEEEE
Confidence 999999999998642 13467899999999999999999999999999 999999999987654
No 16
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.96 E-value=3e-28 Score=220.88 Aligned_cols=207 Identities=14% Similarity=0.166 Sum_probs=157.9
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCeEEEEEcCCCceEEEEee---ecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeE
Q 022387 82 SSPPPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDF---ERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKV 158 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasgs~~gi~vw~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v 158 (298)
..|...|++++|+||+.+|+++.++.|+|||+.+.+......+ .|...+..+.+++++..+++++ .|++|
T Consensus 91 ~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs-------~dg~v 163 (357)
T 4g56_B 91 VQTEAGVTDVAWVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGG-------KDFSV 163 (357)
T ss_dssp EECSSCEEEEEEETTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEE-------TTSCE
T ss_pred CCCCCCEEEEEEcCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEe-------CCCeE
Confidence 3566789999999999888777777799999987654322221 2577889999999999888887 68999
Q ss_pred EEEeCCCCcEEEEeecC-CceEEEEEeCC---eEEEEE-CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCC-eEEE
Q 022387 159 MIWDDHQSRCIGELSFR-SEVRSVKLRRD---RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGS-LVLV 232 (298)
Q Consensus 159 ~iWD~~~~~~~~~~~~~-~~v~~v~~~~~---~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~-~~la 232 (298)
++||+++++.+..+..+ ..|.++.|+++ .++++. +++|++||+++++++..+..+.....+.++.+++++ .+||
T Consensus 164 ~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la 243 (357)
T 4g56_B 164 KVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFA 243 (357)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEE
T ss_pred EEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEE
Confidence 99999999999888754 58999999763 344444 589999999988877666554443344444444443 4566
Q ss_pred EecCCCceEEEEEcCCcc-eEeecccccceeEEEECCCC-CEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 233 CPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDG-QLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 233 ~sGs~dg~v~i~~~~~~~-~~~~~~H~~~V~~l~fspdg-~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
+|+.||.|++||+.... +.++.+|...|++|+|+|++ ++|||||.|++ |||||++++++++.+
T Consensus 244 -~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~-i~iwd~~~~~~~~~~ 308 (357)
T 4g56_B 244 -CGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCT-VAVLDADFSEVFRDL 308 (357)
T ss_dssp -EEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSC-EEEECTTSCEEEEEC
T ss_pred -EeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCE-EEEEECCCCcEeEEC
Confidence 59999999999998754 56889999999999999997 68999999999 999999999987653
No 17
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.96 E-value=3.9e-27 Score=208.18 Aligned_cols=208 Identities=11% Similarity=0.188 Sum_probs=155.8
Q ss_pred ccCCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCce--EEEEeee-cCCceEEEEEec--CCCEEEEEeCCCCCCC
Q 022387 80 TSSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFRE--IFRRDFE-RGGGIGVVEMLF--RCNILALVGGGPDPQY 153 (298)
Q Consensus 80 ~~~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~--~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 153 (298)
+...|...|++++|+|+|++||+|+.++ ++||++.+... .....+. |...+..+.+.+ ++..+++++
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~------- 78 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASAS------- 78 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEE-------
T ss_pred cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEc-------
Confidence 3467888999999999999999999866 88999986532 1222221 677888888877 477888877
Q ss_pred CCCeEEEEeCCCC---------cEEEEee-cCCceEEEEEeCC----eEEEEE-CCeEEEEEcCCCeE------------
Q 022387 154 PLNKVMIWDDHQS---------RCIGELS-FRSEVRSVKLRRD----RIIVVL-EQKIFVYNFADLKL------------ 206 (298)
Q Consensus 154 ~d~~v~iWD~~~~---------~~~~~~~-~~~~v~~v~~~~~----~l~v~~-~~~I~iwd~~~~~~------------ 206 (298)
.|++|++||++++ +.+..+. +...|.++.|+++ .++++. ++.|++||+++.+.
T Consensus 79 ~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 158 (351)
T 3f3f_A 79 YDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKV 158 (351)
T ss_dssp TTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEES
T ss_pred CCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccc
Confidence 6899999999886 3455554 3468999999865 455554 58999999865431
Q ss_pred ------------------------------------------------EEEEeccCCCcceEEEEeCCCC--eEEEEecC
Q 022387 207 ------------------------------------------------LHQIETIANPKGLCAVSQGVGS--LVLVCPGL 236 (298)
Q Consensus 207 ------------------------------------------------i~~~~~~~~~~~~~~~s~~~d~--~~la~sGs 236 (298)
+..+..|...+..+++++++.. .+|+ +|+
T Consensus 159 ~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~-s~~ 237 (351)
T 3f3f_A 159 LSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIA-TGC 237 (351)
T ss_dssp CSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEE-EEE
T ss_pred cccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEE-EEc
Confidence 2333345445545555443211 6777 599
Q ss_pred CCceEEEEEcCC-----------------------------------------------cceEeecccccceeEEEECCC
Q 022387 237 QKGQVRVEHYAS-----------------------------------------------KRTKFIMAHDSRIACFALTQD 269 (298)
Q Consensus 237 ~dg~v~i~~~~~-----------------------------------------------~~~~~~~~H~~~V~~l~fspd 269 (298)
.||.|++|++.. ..+..+.+|...|++|+|+|+
T Consensus 238 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~ 317 (351)
T 3f3f_A 238 KDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLT 317 (351)
T ss_dssp TTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSS
T ss_pred CCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCC
Confidence 999999999875 234467899999999999999
Q ss_pred CCEEEEEeCCCCEEEEEECCCCcEEEe
Q 022387 270 GQLLATSSTKGTLVRIFNTLDGTLLQE 296 (298)
Q Consensus 270 g~~lAt~S~Dgt~IrIWd~~tg~~l~~ 296 (298)
|++|||++.||+ |+|||+.+++.++.
T Consensus 318 ~~~l~s~~~dg~-v~iw~~~~~~~~~~ 343 (351)
T 3f3f_A 318 GTILSSAGDDGK-VRLWKATYSNEFKC 343 (351)
T ss_dssp SCCEEEEETTSC-EEEEEECTTSCEEE
T ss_pred CCEEEEecCCCc-EEEEecCcCcchhh
Confidence 999999999999 99999999866544
No 18
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.96 E-value=8.2e-27 Score=211.08 Aligned_cols=196 Identities=15% Similarity=0.240 Sum_probs=160.0
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecC--CCEEEEEeCCCCCCCCCCeE
Q 022387 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFR--CNILALVGGGPDPQYPLNKV 158 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~v 158 (298)
..|...|.+++|+|++.+|++|+.|+ +++||+++.+.+..... |...+.++.+.+. ++.+++++ .|++|
T Consensus 151 ~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~g~~l~sgs-------~Dg~v 222 (354)
T 2pbi_B 151 AMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHG-HGADVLCLDLAPSETGNTFVSGG-------CDKKA 222 (354)
T ss_dssp EECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECCCSSCCEEEEEE-------TTSCE
T ss_pred eccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcC-CCCCeEEEEEEeCCCCCEEEEEe-------CCCeE
Confidence 35778999999999999999998855 88999999887655553 5777888888764 45777766 68999
Q ss_pred EEEeCCCCcEEEEeecC-CceEEEEEeCC--eEEEEE-CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEe
Q 022387 159 MIWDDHQSRCIGELSFR-SEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCP 234 (298)
Q Consensus 159 ~iWD~~~~~~~~~~~~~-~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~s 234 (298)
++||+++++++..+..+ ..|.++.|+++ .++++. +++|++||++..+.+..+..+.....+.++.+++++.++++
T Consensus 223 ~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~- 301 (354)
T 2pbi_B 223 MVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFA- 301 (354)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEE-
T ss_pred EEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEE-
Confidence 99999999998888754 58999999874 455555 58999999999888777765444344555566667788884
Q ss_pred cCCCceEEEEEcCCc-ceEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEE
Q 022387 235 GLQKGQVRVEHYASK-RTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFN 287 (298)
Q Consensus 235 Gs~dg~v~i~~~~~~-~~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd 287 (298)
|+.||.|++||.... .+..+.+|...|++|+|+|||++|||||.|++ |+||+
T Consensus 302 g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~-v~vW~ 354 (354)
T 2pbi_B 302 GYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHT-LRVWA 354 (354)
T ss_dssp EETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSE-EEEEC
T ss_pred EECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCC-EEecC
Confidence 999999999998655 45688999999999999999999999999999 99996
No 19
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.96 E-value=4.1e-27 Score=207.66 Aligned_cols=201 Identities=18% Similarity=0.169 Sum_probs=154.9
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCC--ceEEEEeeecCCceEEEEEecC--CCEEEEEeCCCCCCCCC
Q 022387 81 SSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPF--REIFRRDFERGGGIGVVEMLFR--CNILALVGGGPDPQYPL 155 (298)
Q Consensus 81 ~~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d 155 (298)
...|...|++++|+|||++||+|+.|+ ++||+++.. +.+..... |.+.+..+.+.+. +..+++++ .|
T Consensus 5 ~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~g-H~~~V~~v~~s~~~~g~~l~s~s-------~D 76 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTG-HEGPVWRVDWAHPKFGTILASCS-------YD 76 (297)
T ss_dssp CCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECC-CSSCEEEEEECCGGGCSEEEEEE-------TT
T ss_pred ccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEcc-ccCCeEEEEecCCCcCCEEEEEc-------CC
Confidence 356888999999999999999999865 899999753 33333332 6778888888653 67778777 78
Q ss_pred CeEEEEeCCCCc--EEEEee-cCCceEEEEEeCC----eEEEEE-CCeEEEEEcCCCe--EEEEEeccCCCcceEEEEeC
Q 022387 156 NKVMIWDDHQSR--CIGELS-FRSEVRSVKLRRD----RIIVVL-EQKIFVYNFADLK--LLHQIETIANPKGLCAVSQG 225 (298)
Q Consensus 156 ~~v~iWD~~~~~--~~~~~~-~~~~v~~v~~~~~----~l~v~~-~~~I~iwd~~~~~--~i~~~~~~~~~~~~~~~s~~ 225 (298)
++|+|||+++++ .+..+. +...|.++.|+++ .++++. ++.|++||+++.. ....+..|...+..++++++
T Consensus 77 ~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~ 156 (297)
T 2pm7_B 77 GKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 156 (297)
T ss_dssp TEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCC
T ss_pred CEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCC
Confidence 999999998874 344444 4468999999874 455554 5899999997653 23556777777777777664
Q ss_pred C-----------CCeEEEEecCCCceEEEEEcCCcc-----eEeecccccceeEEEECCCC---CEEEEEeCCCCEEEEE
Q 022387 226 V-----------GSLVLVCPGLQKGQVRVEHYASKR-----TKFIMAHDSRIACFALTQDG---QLLATSSTKGTLVRIF 286 (298)
Q Consensus 226 ~-----------d~~~la~sGs~dg~v~i~~~~~~~-----~~~~~~H~~~V~~l~fspdg---~~lAt~S~Dgt~IrIW 286 (298)
. ++.+|| +|+.||.|++|++.... ..++.+|...|++|+|+|++ ++|||+|.|++ |+||
T Consensus 157 ~~~~~~~~~~~~~~~~l~-sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~-v~iW 234 (297)
T 2pm7_B 157 TIEEDGEHNGTKESRKFV-TGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRT-CIIW 234 (297)
T ss_dssp C------------CCEEE-EEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSC-EEEE
T ss_pred cccccccCCCCCCcceEE-EEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCc-EEEE
Confidence 2 235777 59999999999987543 34788999999999999995 89999999999 9999
Q ss_pred ECCCC
Q 022387 287 NTLDG 291 (298)
Q Consensus 287 d~~tg 291 (298)
|++++
T Consensus 235 d~~~~ 239 (297)
T 2pm7_B 235 TQDNE 239 (297)
T ss_dssp EESST
T ss_pred EeCCC
Confidence 99875
No 20
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.96 E-value=8.2e-27 Score=209.56 Aligned_cols=195 Identities=14% Similarity=0.194 Sum_probs=159.7
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcC-CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEE
Q 022387 82 SSPPPTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasgs~-~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i 160 (298)
..|...|.++.|++++. |++|+. +.+++||+.+.+....... |.+.+..+.+.+++..+++++ .|++|++
T Consensus 140 ~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~sg~-------~d~~v~~ 210 (340)
T 1got_B 140 AGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTG-HTGDVMSLSLAPDTRLFVSGA-------CDASAKL 210 (340)
T ss_dssp ECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEE-------TTSCEEE
T ss_pred cCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcC-CCCceEEEEECCCCCEEEEEe-------CCCcEEE
Confidence 46778999999999887 555554 6699999999877655543 677888999988888888877 6899999
Q ss_pred EeCCCCcEEEEeecC-CceEEEEEeCC--eEEEEE-CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEecC
Q 022387 161 WDDHQSRCIGELSFR-SEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGL 236 (298)
Q Consensus 161 WD~~~~~~~~~~~~~-~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs 236 (298)
||++++.++..+..+ ..|.+++|+++ .++++. +++|++||+++.+.+..+..+.....+.++++++++.+|++ |+
T Consensus 211 wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~-g~ 289 (340)
T 1got_B 211 WDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLA-GY 289 (340)
T ss_dssp EETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEE-EE
T ss_pred EECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEE-EC
Confidence 999999988888754 58999999875 455554 58999999999888877764433334556666677788884 99
Q ss_pred CCceEEEEEcCCcc-eEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEE
Q 022387 237 QKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFN 287 (298)
Q Consensus 237 ~dg~v~i~~~~~~~-~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd 287 (298)
.||.|++|+..... ...+.+|...|++|+|+|+|++|||||.|++ |+|||
T Consensus 290 ~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~-i~iWd 340 (340)
T 1got_B 290 DDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSF-LKIWN 340 (340)
T ss_dssp TTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSC-EEEEC
T ss_pred CCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCcc-EEecC
Confidence 99999999987654 5588999999999999999999999999999 99997
No 21
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.96 E-value=4.9e-28 Score=220.92 Aligned_cols=207 Identities=14% Similarity=0.162 Sum_probs=162.9
Q ss_pred ccCCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeE
Q 022387 80 TSSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKV 158 (298)
Q Consensus 80 ~~~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v 158 (298)
....|...|++++|+|||++||+|+.|+ ++|||..+.+....... |...+..+.+.+++..+++++ .|+.|
T Consensus 61 ~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~-h~~~v~~~~~s~~g~~las~~-------~d~~v 132 (380)
T 3iz6_a 61 TLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKL-HCPWVMECAFAPNGQSVACGG-------LDSAC 132 (380)
T ss_dssp EECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEEC-CCTTCCCCEECTTSSEEEECC-------SSSCC
T ss_pred cccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEec-CCCCEEEEEECCCCCEEEEee-------CCCcE
Confidence 3467889999999999999999999866 88999999887666655 677788888888888887766 68999
Q ss_pred EEEeCCCCc-------EEEEee-cCCceEEEEEeCC---eEEEEE-CCeEEEEEcCCCeEEEEE-----eccCCCcceEE
Q 022387 159 MIWDDHQSR-------CIGELS-FRSEVRSVKLRRD---RIIVVL-EQKIFVYNFADLKLLHQI-----ETIANPKGLCA 221 (298)
Q Consensus 159 ~iWD~~~~~-------~~~~~~-~~~~v~~v~~~~~---~l~v~~-~~~I~iwd~~~~~~i~~~-----~~~~~~~~~~~ 221 (298)
++||+.+.. ....+. +...|.++.|.++ .++++. +++|++||+.+++.+..+ ..|...+..++
T Consensus 133 ~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~ 212 (380)
T 3iz6_a 133 SIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLS 212 (380)
T ss_dssp EEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEE
T ss_pred EEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEE
Confidence 999987532 122233 3346777888763 455554 589999999999988877 33444444444
Q ss_pred EEeCCCCeEEEEecCCCceEEEEEcCC--cceEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 222 VSQGVGSLVLVCPGLQKGQVRVEHYAS--KRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 222 ~s~~~d~~~la~sGs~dg~v~i~~~~~--~~~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
+++. ++.+++ +|+.||.|++||+.. ..+..+.+|...|++|+|+|+|++|||||.||+ |||||++++++++.|
T Consensus 213 ~~~~-~~~~l~-sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~-i~lwd~~~~~~~~~~ 287 (380)
T 3iz6_a 213 INSL-NANMFI-SGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGT-CRLFDMRTGHQLQVY 287 (380)
T ss_dssp ECSS-SCCEEE-EEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSC-EEEEETTTTEEEEEE
T ss_pred eecC-CCCEEE-EEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCe-EEEEECCCCcEEEEe
Confidence 4432 446676 599999999999863 446689999999999999999999999999999 999999999988765
No 22
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.96 E-value=6.2e-27 Score=226.59 Aligned_cols=208 Identities=16% Similarity=0.210 Sum_probs=164.8
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeee-cCCceEEEEEecCCCEEEEEeCCCCCCCCCCeE
Q 022387 81 SSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFE-RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKV 158 (298)
Q Consensus 81 ~~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v 158 (298)
...|...|++++|+|||++||+|+.++ ++|||+.+.+......+. |.+.+..+.+++++..++.++.+.+ ..++|
T Consensus 55 ~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~---~~~~v 131 (611)
T 1nr0_A 55 YTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRE---RFGHV 131 (611)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSS---CSEEE
T ss_pred ecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCC---ceeEE
Confidence 356788999999999999999999865 889999765433222221 6788999999999998888875422 23578
Q ss_pred EEEeCCCCcEEEEeecC-CceEEEEEeCCe---EEEEE-CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEE
Q 022387 159 MIWDDHQSRCIGELSFR-SEVRSVKLRRDR---IIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVC 233 (298)
Q Consensus 159 ~iWD~~~~~~~~~~~~~-~~v~~v~~~~~~---l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~ 233 (298)
++||. ++.+..+..+ ..|.++.|+++. ++++. +++|++||..+.+++.++..|...+..++|+++ +.+||
T Consensus 132 ~~wd~--~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspd--g~~la- 206 (611)
T 1nr0_A 132 FLFDT--GTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPD--GSLFA- 206 (611)
T ss_dssp EETTT--CCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTT--SSEEE-
T ss_pred EEeeC--CCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCC--CCEEE-
Confidence 88874 4444455544 589999999862 55555 589999999999999999999887777777665 57888
Q ss_pred ecCCCceEEEEEcCCcc-eEeec-------ccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 234 PGLQKGQVRVEHYASKR-TKFIM-------AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 234 sGs~dg~v~i~~~~~~~-~~~~~-------~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
+|+.||.|++|+..... ...+. +|...|++|+|+|||++|||+|.|++ |||||++++++++++
T Consensus 207 s~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~-v~lWd~~~~~~~~~~ 277 (611)
T 1nr0_A 207 STGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKT-IKIWNVATLKVEKTI 277 (611)
T ss_dssp EEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSE-EEEEETTTTEEEEEE
T ss_pred EEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCe-EEEEeCCCCceeeee
Confidence 59999999999987654 33553 79999999999999999999999999 999999999988754
No 23
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.96 E-value=6.6e-27 Score=210.73 Aligned_cols=196 Identities=17% Similarity=0.224 Sum_probs=155.9
Q ss_pred CCCC-CeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEee--ecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeE
Q 022387 83 SPPP-TLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDF--ERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKV 158 (298)
Q Consensus 83 ~~~~-~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v 158 (298)
.|.. .|.+++|+|||++||+|+.|+ |+||+++.........+ .|...+..+.+++++..+++++ .|++|
T Consensus 13 ~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s-------~D~~v 85 (345)
T 3fm0_A 13 AHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASAS-------FDATT 85 (345)
T ss_dssp CSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEE-------TTSCE
T ss_pred CCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEE-------CCCcE
Confidence 4555 899999999999999999865 89999988764332222 2677899999999999998888 78999
Q ss_pred EEEeCCCCc--EEEEeecC-CceEEEEEeCC--eEEEEE-CCeEEEEEcCCC---eEEEEEeccCCCcceEEEEeCCCCe
Q 022387 159 MIWDDHQSR--CIGELSFR-SEVRSVKLRRD--RIIVVL-EQKIFVYNFADL---KLLHQIETIANPKGLCAVSQGVGSL 229 (298)
Q Consensus 159 ~iWD~~~~~--~~~~~~~~-~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~---~~i~~~~~~~~~~~~~~~s~~~d~~ 229 (298)
+|||...+. ++..+..+ ..|.+++|+++ .++++. +++|++||+.+. +++..+..|...+..++++++ +.
T Consensus 86 ~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~--~~ 163 (345)
T 3fm0_A 86 CIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPS--QE 163 (345)
T ss_dssp EEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSS--SS
T ss_pred EEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCC--CC
Confidence 999998764 45566544 58999999875 455554 589999999765 445667777776666666554 47
Q ss_pred EEEEecCCCceEEEEEcCCcc---eEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECC
Q 022387 230 VLVCPGLQKGQVRVEHYASKR---TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTL 289 (298)
Q Consensus 230 ~la~sGs~dg~v~i~~~~~~~---~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~ 289 (298)
+|| +|+.||.|++|+..... ..++.+|...|++|+|+|+|++||+||.|++ |||||..
T Consensus 164 ~l~-s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~-v~iW~~~ 224 (345)
T 3fm0_A 164 LLA-SASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRT-VRIWRQY 224 (345)
T ss_dssp CEE-EEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEEEE
T ss_pred EEE-EEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCe-EEEeccc
Confidence 777 49999999999987653 3478999999999999999999999999999 9999964
No 24
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.5e-26 Score=204.57 Aligned_cols=208 Identities=13% Similarity=0.159 Sum_probs=169.7
Q ss_pred ccCCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeE
Q 022387 80 TSSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKV 158 (298)
Q Consensus 80 ~~~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v 158 (298)
....|...|++++|+|||++||+|+.++ ++||++.+.+.+..... |...+..+.+.++++.+++++ .|++|
T Consensus 27 ~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~-------~dg~i 98 (369)
T 3zwl_B 27 KLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDG-HTGTIWSIDVDCFTKYCVTGS-------ADYSI 98 (369)
T ss_dssp EEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEE-------TTTEE
T ss_pred EEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhh-cCCcEEEEEEcCCCCEEEEEe-------CCCeE
Confidence 3467889999999999999999999765 88999998887665554 678888999998888888887 68999
Q ss_pred EEEeCCCCcEEEEeecCCceEEEEEeCC--eEEEEE-C-----CeEEEEEcCCCe-----------EEEEEeccCCCcce
Q 022387 159 MIWDDHQSRCIGELSFRSEVRSVKLRRD--RIIVVL-E-----QKIFVYNFADLK-----------LLHQIETIANPKGL 219 (298)
Q Consensus 159 ~iWD~~~~~~~~~~~~~~~v~~v~~~~~--~l~v~~-~-----~~I~iwd~~~~~-----------~i~~~~~~~~~~~~ 219 (298)
++||+.+++.+..+.+...+.++.|+++ .++++. + +.|++||+...+ .+..+..+.....+
T Consensus 99 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (369)
T 3zwl_B 99 KLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAA 178 (369)
T ss_dssp EEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCE
T ss_pred EEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccce
Confidence 9999999999999998889999999875 444444 3 799999996442 33444444442244
Q ss_pred EEEEeCCCCeEEEEecCCCceEEEEEcCC--cceEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 220 CAVSQGVGSLVLVCPGLQKGQVRVEHYAS--KRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 220 ~~~s~~~d~~~la~sGs~dg~v~i~~~~~--~~~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
.++.+++++.++++ |+.||.|++|+... .....+..|...|.+++|+|++++|++++.||. |+|||+++++++.++
T Consensus 179 ~~~~~~~~~~~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-i~v~d~~~~~~~~~~ 256 (369)
T 3zwl_B 179 TVAGWSTKGKYIIA-GHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTN-SFLVDVSTLQVLKKY 256 (369)
T ss_dssp EEEEECGGGCEEEE-EETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE-EEEEETTTCCEEEEE
T ss_pred eEEEEcCCCCEEEE-EcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCce-EEEEECCCCceeeee
Confidence 55555556678875 89999999999987 345578899999999999999999999999999 999999999988764
No 25
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.96 E-value=2.1e-26 Score=209.45 Aligned_cols=195 Identities=12% Similarity=0.124 Sum_probs=149.2
Q ss_pred CCCCCeEEEEEcCCCCEEEEEc--CCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEE
Q 022387 83 SPPPTLLHISFNQDHGCFAAGT--DHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (298)
Q Consensus 83 ~~~~~V~~v~fs~dg~~lasgs--~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~ 159 (298)
.+...+++|+|||||++||+++ .++ |+|||..+.+...... |.+.+..+.+++++..+++++ ++.++
T Consensus 131 ~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~--~~~~V~~v~fspdg~~l~s~s--------~~~~~ 200 (365)
T 4h5i_A 131 NADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE--TRGEVKDLHFSTDGKVVAYIT--------GSSLE 200 (365)
T ss_dssp CTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE--CSSCCCEEEECTTSSEEEEEC--------SSCEE
T ss_pred CcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC--CCCceEEEEEccCCceEEecc--------ceeEE
Confidence 3445699999999999987544 444 8899999988877665 578899999999998888766 35688
Q ss_pred EEeCCCCcEEEEee---cCCceEEEEEeCCe--EEEEE-CC----eEEEEEcCCCeE----EEEEeccCCCcceEEEEeC
Q 022387 160 IWDDHQSRCIGELS---FRSEVRSVKLRRDR--IIVVL-EQ----KIFVYNFADLKL----LHQIETIANPKGLCAVSQG 225 (298)
Q Consensus 160 iWD~~~~~~~~~~~---~~~~v~~v~~~~~~--l~v~~-~~----~I~iwd~~~~~~----i~~~~~~~~~~~~~~~s~~ 225 (298)
+|+..+++.+.... +...|.++.|+++. ++++. ++ .+++|++..... .+.+..|..++.+++|+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~S-- 278 (365)
T 4h5i_A 201 VISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVD-- 278 (365)
T ss_dssp EEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEEC--
T ss_pred EEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEEC--
Confidence 88888877655432 23478999998763 33333 33 688899865543 34455566665555555
Q ss_pred CCCeEEEEecCCCceEEEEEcCCcc-eEe-ecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCC
Q 022387 226 VGSLVLVCPGLQKGQVRVEHYASKR-TKF-IMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDG 291 (298)
Q Consensus 226 ~d~~~la~sGs~dg~v~i~~~~~~~-~~~-~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg 291 (298)
+|+.+|| +|+.||.|+|||..+.+ +.+ +.+|...|++|+|||||++|||||.|++ |||||+...
T Consensus 279 pdg~~la-sgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~t-vrvw~ip~~ 344 (365)
T 4h5i_A 279 MKGELAV-LASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANT-IHIIKLPLN 344 (365)
T ss_dssp TTSCEEE-EEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSE-EEEEECCTT
T ss_pred CCCCceE-EEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCe-EEEEEcCCC
Confidence 4568998 49999999999998765 445 5799999999999999999999999999 999999653
No 26
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.95 E-value=4.3e-26 Score=205.00 Aligned_cols=200 Identities=14% Similarity=0.124 Sum_probs=155.8
Q ss_pred cCCCCCCeEEEEE-----cC-CCCEEEEEcCCe-EEEEEcCCCce-----EEEEee-ecCCceEEEEEecCCCEEEEEeC
Q 022387 81 SSSPPPTLLHISF-----NQ-DHGCFAAGTDHG-FRIYNCDPFRE-----IFRRDF-ERGGGIGVVEMLFRCNILALVGG 147 (298)
Q Consensus 81 ~~~~~~~V~~v~f-----s~-dg~~lasgs~~g-i~vw~~~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 147 (298)
...|...|++++| ++ |+++||+|+.|+ |+||++...+. .....+ .|.+.+..+.+.+++..+++++
T Consensus 17 l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s- 95 (343)
T 2xzm_R 17 LEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSS- 95 (343)
T ss_dssp EECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEE-
T ss_pred eccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEc-
Confidence 3578889999999 76 999999999865 89999865321 111222 1677888888988888888877
Q ss_pred CCCCCCCCCeEEEEeCCCCcEEEEeecC-CceEEEEEeCC--eEEEEE-CCeEEEEEcCCCeEEEEEe---ccCCCcceE
Q 022387 148 GPDPQYPLNKVMIWDDHQSRCIGELSFR-SEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIE---TIANPKGLC 220 (298)
Q Consensus 148 ~~~~~~~d~~v~iWD~~~~~~~~~~~~~-~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~~~i~~~~---~~~~~~~~~ 220 (298)
.|++|++||+++++.+..+..+ ..|.++.|+++ .++++. +++|++||+..... ..+. .|...+.++
T Consensus 96 ------~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~-~~~~~~~~~~~~v~~~ 168 (343)
T 2xzm_R 96 ------WDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECK-FSSAEKENHSDWVSCV 168 (343)
T ss_dssp ------TTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEE-EECCTTTSCSSCEEEE
T ss_pred ------CCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCce-eeeecccCCCceeeee
Confidence 7899999999999988887754 58999999875 455554 58999999974433 3333 355555666
Q ss_pred EEEeCCC--------CeEEEEecCCCceEEEEEcCCcceEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCC
Q 022387 221 AVSQGVG--------SLVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLD 290 (298)
Q Consensus 221 ~~s~~~d--------~~~la~sGs~dg~v~i~~~~~~~~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~t 290 (298)
+++++.. +.+++ +|+.||.|++|+........+.+|...|++++|+|+|++||+|+.||+ |+|||+.+
T Consensus 169 ~~~~~~~~~~~~~~~~~~l~-s~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~-v~iwd~~~ 244 (343)
T 2xzm_R 169 RYSPIMKSANKVQPFAPYFA-SVGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKK-LLIWDILN 244 (343)
T ss_dssp EECCCCCSCSCCCSSCCEEE-EEETTSEEEEEETTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCE-EEEEESSC
T ss_pred eeccccccccccCCCCCEEE-EEcCCCEEEEEcCCCceeEEEcCccccceEEEECCCCCEEEEEcCCCe-EEEEECCC
Confidence 6665432 25666 589999999999766666789999999999999999999999999999 99999954
No 27
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.95 E-value=9.3e-27 Score=207.28 Aligned_cols=201 Identities=16% Similarity=0.117 Sum_probs=150.6
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeee-cCCceEEEEEec--CCCEEEEEeCCCCCCCCCC
Q 022387 81 SSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFE-RGGGIGVVEMLF--RCNILALVGGGPDPQYPLN 156 (298)
Q Consensus 81 ~~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~ 156 (298)
...|...|++++|+|||++||+|+.|+ ++|||+.+.+......+. |.+.+..+.+.+ +++.+++++ .|+
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s-------~D~ 81 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCS-------YDR 81 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEE-------TTS
T ss_pred cccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEE-------CCC
Confidence 357888999999999999999999855 889999876543333332 677888888864 367788877 789
Q ss_pred eEEEEeCCCCc--EEEEee-cCCceEEEEEeCC----eEEEEE-CCeEEEEEcCCCeE---EEEEeccCCCcceEEEEeC
Q 022387 157 KVMIWDDHQSR--CIGELS-FRSEVRSVKLRRD----RIIVVL-EQKIFVYNFADLKL---LHQIETIANPKGLCAVSQG 225 (298)
Q Consensus 157 ~v~iWD~~~~~--~~~~~~-~~~~v~~v~~~~~----~l~v~~-~~~I~iwd~~~~~~---i~~~~~~~~~~~~~~~s~~ 225 (298)
+|+|||+++++ .+..+. +...|.+++|+++ .++++. ++.|++||++.... ...+..|...+..++++++
T Consensus 82 ~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 161 (316)
T 3bg1_A 82 KVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPA 161 (316)
T ss_dssp CEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCC
T ss_pred EEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccc
Confidence 99999999874 444554 4458999999875 344444 58999999976532 2334456666666677664
Q ss_pred C---------------CCeEEEEecCCCceEEEEEcCCc----ceEeecccccceeEEEECCCC----CEEEEEeCCCCE
Q 022387 226 V---------------GSLVLVCPGLQKGQVRVEHYASK----RTKFIMAHDSRIACFALTQDG----QLLATSSTKGTL 282 (298)
Q Consensus 226 ~---------------d~~~la~sGs~dg~v~i~~~~~~----~~~~~~~H~~~V~~l~fspdg----~~lAt~S~Dgt~ 282 (298)
. ++.+|| +|+.||.|++|+.... ....+.+|...|++|+|+|++ ++|||||.|++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~l~-sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~- 239 (316)
T 3bg1_A 162 VVPGSLIDHPSGQKPNYIKRFA-SGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGR- 239 (316)
T ss_dssp CCC------CCSCCCCCCCBEE-CCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCE-
T ss_pred cCCccccccccccCccccceEE-EecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCe-
Confidence 2 134666 5999999999998743 345789999999999999997 89999999999
Q ss_pred EEEEECCC
Q 022387 283 VRIFNTLD 290 (298)
Q Consensus 283 IrIWd~~t 290 (298)
|+|||+++
T Consensus 240 v~iw~~~~ 247 (316)
T 3bg1_A 240 VFIWTCDD 247 (316)
T ss_dssp EEEEECSS
T ss_pred EEEEEccC
Confidence 99999986
No 28
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.95 E-value=3.6e-26 Score=205.93 Aligned_cols=205 Identities=15% Similarity=0.163 Sum_probs=152.1
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeee-cCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEE
Q 022387 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFE-RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~ 159 (298)
..|...|++++|+|||++||+|+.|+ ++||+...........+. |...+..+.+.++++.+++++ .|++|+
T Consensus 58 ~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s-------~D~~v~ 130 (345)
T 3fm0_A 58 EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCS-------RDKSVW 130 (345)
T ss_dssp SSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEE-------TTSCEE
T ss_pred cccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEE-------CCCeEE
Confidence 46778999999999999999999855 889999876533333332 677899999999999998888 789999
Q ss_pred EEeCCCCc---EEEEeec-CCceEEEEEeCC--eEEEEE-CCeEEEEEcCCCe--EEEEEeccCCCcceEEEEeCCCCeE
Q 022387 160 IWDDHQSR---CIGELSF-RSEVRSVKLRRD--RIIVVL-EQKIFVYNFADLK--LLHQIETIANPKGLCAVSQGVGSLV 230 (298)
Q Consensus 160 iWD~~~~~---~~~~~~~-~~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~~--~i~~~~~~~~~~~~~~~s~~~d~~~ 230 (298)
+||+.++. ++..+.. ...|.++.|+++ .++++. ++.|++||+.+.+ ++.++..|...+..++|++ ++.+
T Consensus 131 iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp--~g~~ 208 (345)
T 3fm0_A 131 VWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDP--SGQR 208 (345)
T ss_dssp EEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECT--TSSE
T ss_pred EEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECC--CCCE
Confidence 99998764 3344443 457999999875 455555 5899999997765 4567777877766666655 5578
Q ss_pred EEEecCCCceEEEEEcCCc------------------------------------------------c------------
Q 022387 231 LVCPGLQKGQVRVEHYASK------------------------------------------------R------------ 250 (298)
Q Consensus 231 la~sGs~dg~v~i~~~~~~------------------------------------------------~------------ 250 (298)
|| +|+.||.|++|+.... .
T Consensus 209 l~-s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~ 287 (345)
T 3fm0_A 209 LA-SCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDP 287 (345)
T ss_dssp EE-EEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCT
T ss_pred EE-EEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCc
Confidence 88 5899999999974100 0
Q ss_pred --------eEeecccccceeEEEECCCC-CEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 251 --------TKFIMAHDSRIACFALTQDG-QLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 251 --------~~~~~~H~~~V~~l~fspdg-~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
...+.+|...|++|+|+|++ .+|||||.||+ |+||++.+++.+.++
T Consensus 288 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~-v~~W~~~~~~~~~~~ 342 (345)
T 3fm0_A 288 QQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGE-VAFWKYQRPEGLHHH 342 (345)
T ss_dssp TSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSC-EEEEEECC-------
T ss_pred ceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCc-EEEEEecCCCCcccc
Confidence 00124788999999999998 59999999999 999999999887664
No 29
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.95 E-value=1.4e-25 Score=199.84 Aligned_cols=200 Identities=11% Similarity=0.176 Sum_probs=161.1
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEE
Q 022387 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i 160 (298)
..|...|.+++|+|||++|++|+.|+ ++|||+.+.+....... |...+..+.+.+++..+++++ .|++|++
T Consensus 62 ~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~s-------~D~~i~v 133 (319)
T 3frx_A 62 KGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVG-HKSDVMSVDIDKKASMIISGS-------RDKTIKV 133 (319)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEECTTSCEEEEEE-------TTSCEEE
T ss_pred eCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEcc-CCCcEEEEEEcCCCCEEEEEe-------CCCeEEE
Confidence 46778999999999999999999755 88999999877655543 678888888888888888877 7899999
Q ss_pred EeCCCCcEEEEe-ecCCceEEEEEeCC--------eEEEEE-CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeE
Q 022387 161 WDDHQSRCIGEL-SFRSEVRSVKLRRD--------RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLV 230 (298)
Q Consensus 161 WD~~~~~~~~~~-~~~~~v~~v~~~~~--------~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~ 230 (298)
||++.. ++..+ .+...|.++.+.+. .++.+. ++.|++||+++.+....+..|...+..+++++ ++.+
T Consensus 134 wd~~~~-~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp--~g~~ 210 (319)
T 3frx_A 134 WTIKGQ-CLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASP--DGTL 210 (319)
T ss_dssp EETTSC-EEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECT--TSSE
T ss_pred EECCCC-eEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcC--CCCE
Confidence 999754 44444 45568899998764 344444 58999999999999999998888777776665 4588
Q ss_pred EEEecCCCceEEEEEcCCcceE-eecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEe
Q 022387 231 LVCPGLQKGQVRVEHYASKRTK-FIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQE 296 (298)
Q Consensus 231 la~sGs~dg~v~i~~~~~~~~~-~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~ 296 (298)
|+ +|+.||.|++||+...... .+. +...|.+++|+|+|.+||+++. +. |+||++..+.++.+
T Consensus 211 l~-s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~la~~~~-~~-i~v~~~~~~~~~~~ 273 (319)
T 3frx_A 211 IA-SAGKDGEIMLWNLAAKKAMYTLS-AQDEVFSLAFSPNRYWLAAATA-TG-IKVFSLDPQYLVDD 273 (319)
T ss_dssp EE-EEETTCEEEEEETTTTEEEEEEE-CCSCEEEEEECSSSSEEEEEET-TE-EEEEEETTEEEEEE
T ss_pred EE-EEeCCCeEEEEECCCCcEEEEec-CCCcEEEEEEcCCCCEEEEEcC-CC-cEEEEeCcCeeeec
Confidence 88 5999999999999877654 554 4578999999999999999984 55 99999998776654
No 30
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.95 E-value=7.3e-26 Score=199.61 Aligned_cols=198 Identities=11% Similarity=0.071 Sum_probs=152.9
Q ss_pred CCCCCCeEEEEEcC--CCCEEEEEcCCe-EEEEEcCCCc--eEEEEeeecCCceEEEEEecC--CCEEEEEeCCCCCCCC
Q 022387 82 SSPPPTLLHISFNQ--DHGCFAAGTDHG-FRIYNCDPFR--EIFRRDFERGGGIGVVEMLFR--CNILALVGGGPDPQYP 154 (298)
Q Consensus 82 ~~~~~~V~~v~fs~--dg~~lasgs~~g-i~vw~~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 154 (298)
..|...|.+++|++ +|++||+|+.|+ ++||++.+.+ .+..... |...+..+.+.++ +..+++++ .
T Consensus 50 ~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~g~~l~s~s-------~ 121 (297)
T 2pm7_B 50 TGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAV-HSASVNSVQWAPHEYGPMLLVAS-------S 121 (297)
T ss_dssp CCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECC-CSSCEEEEEECCGGGCSEEEEEE-------T
T ss_pred ccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeec-CCCceeEEEeCcCCCCcEEEEEE-------C
Confidence 46788999999986 489999999755 8899998764 2223322 5678888888876 56777777 6
Q ss_pred CCeEEEEeCCCCcE--EEEee-cCCceEEEEEeCC---------------eEEEEE-CCeEEEEEcCCCe----EEEEEe
Q 022387 155 LNKVMIWDDHQSRC--IGELS-FRSEVRSVKLRRD---------------RIIVVL-EQKIFVYNFADLK----LLHQIE 211 (298)
Q Consensus 155 d~~v~iWD~~~~~~--~~~~~-~~~~v~~v~~~~~---------------~l~v~~-~~~I~iwd~~~~~----~i~~~~ 211 (298)
|++|++||++++.. ...+. +...|.++.|+++ .++++. +++|++||+++.+ ++.++.
T Consensus 122 d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~ 201 (297)
T 2pm7_B 122 DGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE 201 (297)
T ss_dssp TSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEEC
T ss_pred CCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEec
Confidence 89999999987532 22333 4458999999875 455554 5899999997654 667788
Q ss_pred ccCCCcceEEEEeCC-CCeEEEEecCCCceEEEEEcCCcc----eEee--cccccceeEEEECCCCCEEEEEeCCCCEEE
Q 022387 212 TIANPKGLCAVSQGV-GSLVLVCPGLQKGQVRVEHYASKR----TKFI--MAHDSRIACFALTQDGQLLATSSTKGTLVR 284 (298)
Q Consensus 212 ~~~~~~~~~~~s~~~-d~~~la~sGs~dg~v~i~~~~~~~----~~~~--~~H~~~V~~l~fspdg~~lAt~S~Dgt~Ir 284 (298)
.|...+..++|+++. .+.+|| +|+.||.|++|+..... ...+ ..|...|.+++|+|+|++||+++.|++ |+
T Consensus 202 ~H~~~V~~v~~sp~~~~~~~la-s~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~-v~ 279 (297)
T 2pm7_B 202 GHSDWVRDVAWSPTVLLRSYMA-SVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNK-VT 279 (297)
T ss_dssp CCSSCEEEEEECCCCSSSEEEE-EEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSC-EE
T ss_pred CCCCceEEEEECCCCCCceEEE-EEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCc-EE
Confidence 888888777777753 236777 59999999999987632 2233 578899999999999999999999999 99
Q ss_pred EEECC
Q 022387 285 IFNTL 289 (298)
Q Consensus 285 IWd~~ 289 (298)
||+..
T Consensus 280 lw~~~ 284 (297)
T 2pm7_B 280 LWKEN 284 (297)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99987
No 31
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.95 E-value=7.2e-26 Score=207.46 Aligned_cols=198 Identities=16% Similarity=0.185 Sum_probs=155.9
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCeEEEEEcCCCceEEEEeee-----------------cCCceEEEEEecCCCEEEEE
Q 022387 83 SPPPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFE-----------------RGGGIGVVEMLFRCNILALV 145 (298)
Q Consensus 83 ~~~~~V~~v~fs~dg~~lasgs~~gi~vw~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~ 145 (298)
.|...|.+++|+|||++||+|+++.++||++.+++.+...... +...+..+.+++++..++++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~ 141 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATG 141 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEE
Confidence 4788999999999999999999888999999888765444310 01126778888888888887
Q ss_pred eCCCCCCCCCCeEEEEeCCCCcEEEEeecC-CceEEEEEeCC--eEEEEE-CCeEEEEEcCCCeEEEEEeccCCCcceEE
Q 022387 146 GGGPDPQYPLNKVMIWDDHQSRCIGELSFR-SEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCA 221 (298)
Q Consensus 146 ~~~~~~~~~d~~v~iWD~~~~~~~~~~~~~-~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~~~~~~ 221 (298)
+ .|++|+|||+.+++.+..+..+ ..|.++.|+++ .++++. +++|++||+++++...++..+ ..+..++
T Consensus 142 ~-------~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~-~~v~~~~ 213 (393)
T 1erj_A 142 A-------EDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIE-DGVTTVA 213 (393)
T ss_dssp E-------TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECS-SCEEEEE
T ss_pred c-------CCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcC-CCcEEEE
Confidence 7 6899999999999988887754 58999999874 455554 589999999999988777643 3344455
Q ss_pred EEeCCCCeEEEEecCCCceEEEEEcCCcceE-ee-------cccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCC
Q 022387 222 VSQGVGSLVLVCPGLQKGQVRVEHYASKRTK-FI-------MAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDG 291 (298)
Q Consensus 222 ~s~~~d~~~la~sGs~dg~v~i~~~~~~~~~-~~-------~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg 291 (298)
+++. ++.+++ +|+.||.|++||....... .+ .+|...|++|+|+|+|++||+|+.|++ |+|||++++
T Consensus 214 ~~~~-~~~~l~-~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~-v~~wd~~~~ 288 (393)
T 1erj_A 214 VSPG-DGKYIA-AGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS-VKLWNLQNA 288 (393)
T ss_dssp ECST-TCCEEE-EEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSE-EEEEEC---
T ss_pred EECC-CCCEEE-EEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCE-EEEEECCCC
Confidence 5441 457777 4999999999998876533 33 679999999999999999999999999 999999864
No 32
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.95 E-value=2.2e-25 Score=199.30 Aligned_cols=209 Identities=13% Similarity=0.134 Sum_probs=163.4
Q ss_pred ccCCCCCCeEEEEEcCC---CCEEEEEcCCe-EEEEEcCCCceEEEEee-ecCCceEEEEEecCCCEEEEEeCCCCCCCC
Q 022387 80 TSSSPPPTLLHISFNQD---HGCFAAGTDHG-FRIYNCDPFREIFRRDF-ERGGGIGVVEMLFRCNILALVGGGPDPQYP 154 (298)
Q Consensus 80 ~~~~~~~~V~~v~fs~d---g~~lasgs~~g-i~vw~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (298)
....|...|++++|+|+ |++|++|+.++ ++||++++.+......+ .|.+.+..+.+.+++..+++++ .
T Consensus 34 ~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-------~ 106 (368)
T 3mmy_A 34 VTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTAS-------C 106 (368)
T ss_dssp CSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEE-------T
T ss_pred eccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEc-------C
Confidence 44678889999999999 69999999865 88999987333322222 2688899999999998888887 6
Q ss_pred CCeEEEEeCCCCcEEEEeecCCceEEEEE--eCCe--EEEEE-CCeEEEEEcCCCeEEEEEeccCC--------------
Q 022387 155 LNKVMIWDDHQSRCIGELSFRSEVRSVKL--RRDR--IIVVL-EQKIFVYNFADLKLLHQIETIAN-------------- 215 (298)
Q Consensus 155 d~~v~iWD~~~~~~~~~~~~~~~v~~v~~--~~~~--l~v~~-~~~I~iwd~~~~~~i~~~~~~~~-------------- 215 (298)
|+.|++||+++++.+....+...|.++.| +++. ++++. ++.|++||+++++.+..+..+..
T Consensus 107 dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (368)
T 3mmy_A 107 DKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVA 186 (368)
T ss_dssp TSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEE
T ss_pred CCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEE
Confidence 89999999999998887778889999999 6653 44444 58999999998887777664431
Q ss_pred ---------------------------CcceEEEEeCCCC--eEEEEecCCCceEEEEEcCCc----ceEeeccccc---
Q 022387 216 ---------------------------PKGLCAVSQGVGS--LVLVCPGLQKGQVRVEHYASK----RTKFIMAHDS--- 259 (298)
Q Consensus 216 ---------------------------~~~~~~~s~~~d~--~~la~sGs~dg~v~i~~~~~~----~~~~~~~H~~--- 259 (298)
...++++..+... ..++ +|+.||.|++|++... ....+.+|..
T Consensus 187 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~ 265 (368)
T 3mmy_A 187 TAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFA-LGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGT 265 (368)
T ss_dssp EGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEE-EEETTSEEEEEESSCSCHHHHSEEEECSEEC--
T ss_pred eCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEE-EecCCCcEEEEecCCCCccccceeeeeeecccc
Confidence 1223333333321 2255 4899999999999874 3457778876
Q ss_pred ---------ceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 260 ---------RIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 260 ---------~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
.|++++|+|+|++||+++.||. |+|||+.++++++++
T Consensus 266 ~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~-i~iwd~~~~~~~~~~ 311 (368)
T 3mmy_A 266 NTSAPQDIYAVNGIAFHPVHGTLATVGSDGR-FSFWDKDARTKLKTS 311 (368)
T ss_dssp --CCCEEECCEEEEEECTTTCCEEEEETTSC-EEEEETTTTEEEEEC
T ss_pred cccccccccceEEEEEecCCCEEEEEccCCe-EEEEECCCCcEEEEe
Confidence 7999999999999999999999 999999999998775
No 33
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.95 E-value=4e-27 Score=218.50 Aligned_cols=204 Identities=12% Similarity=0.078 Sum_probs=155.7
Q ss_pred CCCCCCeEEEEEcC-CCCEEEEEcCCe-EEEEEcCCCceEEEEee-ecCCceEEEEEec-CCCEEEEEeCCCCCCCCCCe
Q 022387 82 SSPPPTLLHISFNQ-DHGCFAAGTDHG-FRIYNCDPFREIFRRDF-ERGGGIGVVEMLF-RCNILALVGGGPDPQYPLNK 157 (298)
Q Consensus 82 ~~~~~~V~~v~fs~-dg~~lasgs~~g-i~vw~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~ 157 (298)
..|...|+||+|+| ++++||+|+.|| |+|||+++........+ .|.+.|..+.+.+ +++.+++++ .|++
T Consensus 116 ~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s-------~D~~ 188 (435)
T 4e54_B 116 APFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASS-------MEGT 188 (435)
T ss_dssp EECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEEC-------SSSC
T ss_pred CCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEe-------CCCE
Confidence 34667899999999 567999999866 88999987765444433 2677888999885 567777776 6899
Q ss_pred EEEEeCCCCcEEEEeecC---CceEEEEEeCC--eEEEEE-CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEE
Q 022387 158 VMIWDDHQSRCIGELSFR---SEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVL 231 (298)
Q Consensus 158 v~iWD~~~~~~~~~~~~~---~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~l 231 (298)
|+|||++++........+ ..+.++.|+++ .++++. ++.|++||++. +.+.++..|...+..++|+++.+ .++
T Consensus 189 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v~~v~~~p~~~-~~~ 266 (435)
T 4e54_B 189 TRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLRMHKKKVTHVALNPCCD-WFL 266 (435)
T ss_dssp EEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSBCCSSCEEEEEECTTCS-SEE
T ss_pred EEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEecccceEEeeeecCCCc-eEE
Confidence 999999876544333332 24678888875 344443 48999999864 55677788888777777766542 245
Q ss_pred EEecCCCceEEEEEcCCcc----eEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEe
Q 022387 232 VCPGLQKGQVRVEHYASKR----TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQE 296 (298)
Q Consensus 232 a~sGs~dg~v~i~~~~~~~----~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~ 296 (298)
+ +|+.||.|++||+.... .....+|...|++|+|+|+|++|||++.||+ |+|||+.++++...
T Consensus 267 ~-s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~-i~iwd~~~~~~~~~ 333 (435)
T 4e54_B 267 A-TASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSE-IRVYSASQWDCPLG 333 (435)
T ss_dssp E-EEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSC-EEEEESSSSSSEEE
T ss_pred E-EecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCE-EEEEECCCCccceE
Confidence 4 58999999999987543 2245689999999999999999999999999 99999999876644
No 34
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.3e-25 Score=201.12 Aligned_cols=198 Identities=16% Similarity=0.226 Sum_probs=152.1
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCC-------ceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCC
Q 022387 84 PPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPF-------REIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPL 155 (298)
Q Consensus 84 ~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 155 (298)
|...|++++|+|+|++||+|+.|+ ++||+++.. +....... |.+.+..+.+++++..+++++ .|
T Consensus 57 h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~-h~~~V~~v~~sp~g~~las~s-------~D 128 (330)
T 2hes_X 57 HKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEG-HENEVKGVAWSNDGYYLATCS-------RD 128 (330)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC-----CEEEEEECTTSCEEEEEE-------TT
T ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcC-CCCcEEEEEECCCCCEEEEEe-------CC
Confidence 778999999999999999999755 899998532 22222222 677889999999999888888 78
Q ss_pred CeEEEEeCCCC----cEEEEeec-CCceEEEEEeCC--eEEEEE-CCeEEEEEcCCC--eEEEEEeccCCCcceEEEEeC
Q 022387 156 NKVMIWDDHQS----RCIGELSF-RSEVRSVKLRRD--RIIVVL-EQKIFVYNFADL--KLLHQIETIANPKGLCAVSQG 225 (298)
Q Consensus 156 ~~v~iWD~~~~----~~~~~~~~-~~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~--~~i~~~~~~~~~~~~~~~s~~ 225 (298)
++|++||++.. +++..+.. ...|.++.|+++ .++++. +++|++||+.+. +++.++..|...+..++|+++
T Consensus 129 ~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 208 (330)
T 2hes_X 129 KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKT 208 (330)
T ss_dssp SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCS
T ss_pred CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCC
Confidence 99999999532 34555554 458999999875 455554 589999999765 678888889888888888877
Q ss_pred CCCeEEEEecCCCceEEEEEcCCc---------ceEeecc-cccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCc
Q 022387 226 VGSLVLVCPGLQKGQVRVEHYASK---------RTKFIMA-HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGT 292 (298)
Q Consensus 226 ~d~~~la~sGs~dg~v~i~~~~~~---------~~~~~~~-H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~ 292 (298)
.++.+|+ +|+.||.|++|++... ....+.. |...|++|+|++++ +||+++.||+ |+|||..+++
T Consensus 209 ~~~~~l~-s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~-v~iw~~~~~~ 282 (330)
T 2hes_X 209 EGVFRLC-SGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGV-LAVYEEVDGE 282 (330)
T ss_dssp SSSCEEE-EEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSC-EEEEEEETTE
T ss_pred CCeeEEE-EEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCE-EEEEEcCCCc
Confidence 5566777 5999999999998643 1234544 99999999999765 8999999999 9999998873
No 35
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.95 E-value=4e-26 Score=204.22 Aligned_cols=200 Identities=13% Similarity=0.161 Sum_probs=163.9
Q ss_pred CCCCCCeEEEEEcC-CCCEEEEEcCCe-EEEEEcCCCceEEEEe--eecCCceEEEEEecCCCEEEEEeCCCCCCCCCCe
Q 022387 82 SSPPPTLLHISFNQ-DHGCFAAGTDHG-FRIYNCDPFREIFRRD--FERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (298)
Q Consensus 82 ~~~~~~V~~v~fs~-dg~~lasgs~~g-i~vw~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 157 (298)
..|...|++++|+| ++++|++|+.++ ++|||+.+.+...... ..|...+..+.+.+++..+++++ .|+.
T Consensus 112 ~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------~dg~ 184 (366)
T 3k26_A 112 VGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCG-------MDHS 184 (366)
T ss_dssp ESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEE-------TTSC
T ss_pred cCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEec-------CCCC
Confidence 46788999999999 999999999865 8899999887765541 11578889999999888888887 6799
Q ss_pred EEEEeCCCCcEEEEee-----------------------------cCCceEEEEEeCCeEEEEE-CCeEEEEEcCCCe--
Q 022387 158 VMIWDDHQSRCIGELS-----------------------------FRSEVRSVKLRRDRIIVVL-EQKIFVYNFADLK-- 205 (298)
Q Consensus 158 v~iWD~~~~~~~~~~~-----------------------------~~~~v~~v~~~~~~l~v~~-~~~I~iwd~~~~~-- 205 (298)
|++||+++++.+..+. +...|.++.|+++.++++. ++.|++||+.+.+
T Consensus 185 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~ 264 (366)
T 3k26_A 185 LKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDD 264 (366)
T ss_dssp EEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTEEEEECSSSEEEEEEESSTTCC
T ss_pred EEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcCCEEEEEecCCEEEEEeCCCcccc
Confidence 9999998865443322 4568999999977777765 5899999997653
Q ss_pred ------------EEEEEeccCCCcceEEEEeCCCCeEEEEecCCCceEEEEEcCCcc-----eEeeccc--ccceeEEEE
Q 022387 206 ------------LLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-----TKFIMAH--DSRIACFAL 266 (298)
Q Consensus 206 ------------~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~~-----~~~~~~H--~~~V~~l~f 266 (298)
.+..+..|...+..+++++++++.+|++ |+.||.|++|++.... ...+.+| ...|++|+|
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~-~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 343 (366)
T 3k26_A 265 IDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLAL-GNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSF 343 (366)
T ss_dssp GGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEE-ECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEE
T ss_pred ccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEE-EecCCcEEEEECCCCCCccccceEEcccccCCceEEEEe
Confidence 4788888888888999999865688884 8999999999998653 3367777 799999999
Q ss_pred CCCCCEEEEEeCCCCEEEEEECCC
Q 022387 267 TQDGQLLATSSTKGTLVRIFNTLD 290 (298)
Q Consensus 267 spdg~~lAt~S~Dgt~IrIWd~~t 290 (298)
+|+|++||+++.||. |+|||+.+
T Consensus 344 s~~~~~l~s~~~dg~-i~iwd~~~ 366 (366)
T 3k26_A 344 SRDSSILIAVCDDAS-IWRWDRLR 366 (366)
T ss_dssp CTTSSEEEEEETTSE-EEEEEC--
T ss_pred CCCCCeEEEEeCCCE-EEEEEecC
Confidence 999999999999999 99999864
No 36
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.95 E-value=2.9e-25 Score=197.06 Aligned_cols=208 Identities=13% Similarity=0.099 Sum_probs=164.6
Q ss_pred cCCCCCCeEEEEEcCC-CCEEEEEcCCe-EEEEEcCCCce---EEEEeee-cCCceEEEEEecCCCEEEEEeCCCCCCCC
Q 022387 81 SSSPPPTLLHISFNQD-HGCFAAGTDHG-FRIYNCDPFRE---IFRRDFE-RGGGIGVVEMLFRCNILALVGGGPDPQYP 154 (298)
Q Consensus 81 ~~~~~~~V~~v~fs~d-g~~lasgs~~g-i~vw~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (298)
..+|.+.|++|+|+|+ +++||||+.|+ |+||++...+. .....+. |...+..+.+.+++..+++++ .
T Consensus 34 L~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~-------~ 106 (340)
T 4aow_A 34 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGS-------W 106 (340)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEE-------T
T ss_pred ECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEc-------c
Confidence 4679999999999998 68999999865 89999976542 1122221 677899999999999888887 7
Q ss_pred CCeEEEEeCCCCcEEEEeecC-CceEEEEEeC--CeEEEEE-CCeEEEEEcCCCeEEE-EEeccCCCcceEEEEeCCCCe
Q 022387 155 LNKVMIWDDHQSRCIGELSFR-SEVRSVKLRR--DRIIVVL-EQKIFVYNFADLKLLH-QIETIANPKGLCAVSQGVGSL 229 (298)
Q Consensus 155 d~~v~iWD~~~~~~~~~~~~~-~~v~~v~~~~--~~l~v~~-~~~I~iwd~~~~~~i~-~~~~~~~~~~~~~~s~~~d~~ 229 (298)
|+.|++|+............. ..+..+.+.+ ..++++. ++.+++||+....... .+..|...+..+++++++...
T Consensus 107 d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 186 (340)
T 4aow_A 107 DGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNP 186 (340)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSC
T ss_pred cccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCc
Confidence 899999999998777666554 3566666654 4555554 5899999997655433 334566677778888877767
Q ss_pred EEEEecCCCceEEEEEcCCcce-EeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 230 VLVCPGLQKGQVRVEHYASKRT-KFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 230 ~la~sGs~dg~v~i~~~~~~~~-~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
+++ +|+.|+.|++|+...... ..+.+|...|++|+|+|+|++||+|+.||+ |+|||++++++++.+
T Consensus 187 ~~~-s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~-i~iwd~~~~~~~~~~ 253 (340)
T 4aow_A 187 IIV-SCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQ-AMLWDLNEGKHLYTL 253 (340)
T ss_dssp EEE-EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCE-EEEEETTTTEEEEEE
T ss_pred EEE-EEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCe-EEEEEeccCceeeee
Confidence 777 589999999999987654 478899999999999999999999999999 999999999988764
No 37
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.95 E-value=1.9e-25 Score=218.90 Aligned_cols=206 Identities=14% Similarity=0.095 Sum_probs=163.9
Q ss_pred CCCCCCeEEEEEcCCC-CEEEEEcCCe-EEEEEcCCCce-----EEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCC
Q 022387 82 SSPPPTLLHISFNQDH-GCFAAGTDHG-FRIYNCDPFRE-----IFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYP 154 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg-~~lasgs~~g-i~vw~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (298)
..|...|++|+|++++ ++|++|+.|+ |+||++..... ...... |.+.+..+.+++++..+++++ .
T Consensus 379 ~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~-h~~~v~~v~~s~~g~~l~sgs-------~ 450 (694)
T 3dm0_A 379 RAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTG-HSHFVEDVVLSSDGQFALSGS-------W 450 (694)
T ss_dssp ECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEEC-CSSCEEEEEECTTSSEEEEEE-------T
T ss_pred ccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecC-CCCcEEEEEECCCCCEEEEEe-------C
Confidence 5799999999999875 7999999865 88999875421 122222 678899999999999888887 7
Q ss_pred CCeEEEEeCCCCcEEEEeecC-CceEEEEEeCC--eEEEEE-CCeEEEEEcCCCeEEEEE---eccCCCcceEEEEeCCC
Q 022387 155 LNKVMIWDDHQSRCIGELSFR-SEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQI---ETIANPKGLCAVSQGVG 227 (298)
Q Consensus 155 d~~v~iWD~~~~~~~~~~~~~-~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~~~i~~~---~~~~~~~~~~~~s~~~d 227 (298)
|++|+|||+.+++.+..+..+ ..|.++.|+++ .++++. +++|++||+......... ..|...+.+++++++..
T Consensus 451 Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 530 (694)
T 3dm0_A 451 DGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTL 530 (694)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSS
T ss_pred CCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCC
Confidence 899999999999988887654 58999999875 455555 589999998655433222 23555566677776654
Q ss_pred CeEEEEecCCCceEEEEEcCCcce-EeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 228 SLVLVCPGLQKGQVRVEHYASKRT-KFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 228 ~~~la~sGs~dg~v~i~~~~~~~~-~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
..+++ +|+.||.|++||+..... .++.+|.+.|++|+|+|+|++|||||.||+ |+|||++++++++++
T Consensus 531 ~~~l~-s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~-i~iwd~~~~~~~~~~ 599 (694)
T 3dm0_A 531 QPTIV-SASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGV-VLLWDLAEGKKLYSL 599 (694)
T ss_dssp SCEEE-EEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSB-CEEEETTTTEEEECC
T ss_pred cceEE-EEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCe-EEEEECCCCceEEEe
Confidence 45666 599999999999987654 478999999999999999999999999999 999999999988654
No 38
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.95 E-value=1.5e-25 Score=213.74 Aligned_cols=191 Identities=17% Similarity=0.252 Sum_probs=156.6
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEE
Q 022387 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i 160 (298)
..|...|++++|+|||++||+|+.++ ++||+.. .+.+..... |...+..+.+++++..+++++ .|++|++
T Consensus 382 ~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~-~~~~~~~~~-~~~~v~~~~~s~d~~~l~~~~-------~d~~v~~ 452 (577)
T 2ymu_A 382 TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQTLTG-HSSSVWGVAFSPDDQTIASAS-------DDKTVKL 452 (577)
T ss_dssp ECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-CCEEEEEEC-CSSCEEEEEECTTSSEEEEEE-------TTSEEEE
T ss_pred cCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCC-CCEEEEecC-CCCCeEEEEECCCCCEEEEEc-------CCCEEEE
Confidence 45778999999999999999999865 8899964 333333332 677888889999999888887 6899999
Q ss_pred EeCCCCcEEEEee-cCCceEEEEEeCC--eEEEEE-CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEecC
Q 022387 161 WDDHQSRCIGELS-FRSEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGL 236 (298)
Q Consensus 161 WD~~~~~~~~~~~-~~~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs 236 (298)
||.. ++.+..+. +...|.+++|+++ .++++. ++.|++||. ++++++++..|...+..++|++ ++.+|| +|+
T Consensus 453 w~~~-~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~--dg~~l~-s~~ 527 (577)
T 2ymu_A 453 WNRN-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSP--DGQTIA-SAS 527 (577)
T ss_dssp EETT-SCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECT--TSSCEE-EEE
T ss_pred EECC-CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcC--CCCEEE-EEE
Confidence 9974 45555555 4568999999875 444444 579999995 6788899999888777777665 457888 489
Q ss_pred CCceEEEEEcCCcceEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEE
Q 022387 237 QKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFN 287 (298)
Q Consensus 237 ~dg~v~i~~~~~~~~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd 287 (298)
.||.|++||.+.+.+.++.+|.+.|++|+|+|||++|+|+|.|++ |+|||
T Consensus 528 ~dg~v~lwd~~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~-i~~Wd 577 (577)
T 2ymu_A 528 DDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKT-VKLWN 577 (577)
T ss_dssp TTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSC-EEEEC
T ss_pred CcCEEEEEeCCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCE-EEEeC
Confidence 999999999887778899999999999999999999999999999 99997
No 39
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.95 E-value=3.8e-25 Score=198.00 Aligned_cols=197 Identities=13% Similarity=0.156 Sum_probs=152.2
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCce--EEEEeee-cCCceEEEEEecCCCEEEEEeCCCCCCCCCCe
Q 022387 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFRE--IFRRDFE-RGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 157 (298)
..|...|.+++|+++ +||+|+.|+ ++||++..... ....... |.+.+..+.+.+++..+++++ .|++
T Consensus 11 ~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s-------~D~~ 81 (330)
T 2hes_X 11 KLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGS-------FDST 81 (330)
T ss_dssp ECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEE-------TTSC
T ss_pred ccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEe-------CCCc
Confidence 468889999999998 999998755 89999987532 2222111 567889999999999888887 6899
Q ss_pred EEEEeCCC-------CcEEEEeec-CCceEEEEEeCC--eEEEEE-CCeEEEEEcCC----CeEEEEEeccCCCcceEEE
Q 022387 158 VMIWDDHQ-------SRCIGELSF-RSEVRSVKLRRD--RIIVVL-EQKIFVYNFAD----LKLLHQIETIANPKGLCAV 222 (298)
Q Consensus 158 v~iWD~~~-------~~~~~~~~~-~~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~----~~~i~~~~~~~~~~~~~~~ 222 (298)
|+|||... .+.+..+.. ...|.++.|+++ .++++. +++|++||++. .+++..+..|...+..+++
T Consensus 82 v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~ 161 (330)
T 2hes_X 82 VSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIW 161 (330)
T ss_dssp EEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEE
T ss_pred EEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEE
Confidence 99999853 234455554 458999999875 455554 58999999942 3567788888777766666
Q ss_pred EeCCCCeEEEEecCCCceEEEEEcCCc---ceEeecccccceeEEEECCC--CCEEEEEeCCCCEEEEEECCCC
Q 022387 223 SQGVGSLVLVCPGLQKGQVRVEHYASK---RTKFIMAHDSRIACFALTQD--GQLLATSSTKGTLVRIFNTLDG 291 (298)
Q Consensus 223 s~~~d~~~la~sGs~dg~v~i~~~~~~---~~~~~~~H~~~V~~l~fspd--g~~lAt~S~Dgt~IrIWd~~tg 291 (298)
+++ +.+|+ +|+.||.|++|+.... .+..+.+|...|++++|+|+ +.+||+||.|++ |||||++++
T Consensus 162 ~p~--~~~l~-s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~-v~iw~~~~~ 231 (330)
T 2hes_X 162 HPS--EALLA-SSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDST-VRVWKYMGD 231 (330)
T ss_dssp CSS--SSEEE-EEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSC-EEEEEEEEE
T ss_pred CCC--CCEEE-EEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCe-EEEEEecCC
Confidence 654 47787 5999999999997654 45688999999999999999 789999999999 999998764
No 40
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.94 E-value=8.6e-25 Score=192.25 Aligned_cols=194 Identities=15% Similarity=0.200 Sum_probs=138.5
Q ss_pred eEEEEEcCCCCEEEEEcCCeEEEEEcCCCceEEEEeee-cCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCC
Q 022387 88 LLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFE-RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQS 166 (298)
Q Consensus 88 V~~v~fs~dg~~lasgs~~gi~vw~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~ 166 (298)
+++|+||+++ +||+|.++.|+|||+++++.+....+. |...+..+.+.++++.+++++ .|++|++||++++
T Consensus 28 ~~~l~WS~~~-~lAvg~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs-------~Dg~v~iw~~~~~ 99 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGT-------SSAEVQLWDVQQQ 99 (318)
T ss_dssp CBCEEECTTS-EEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEE-------TTSEEEEEETTTT
T ss_pred ceEEEECCCC-EEEEEeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEE-------CCCcEEEeecCCc
Confidence 4679999986 899999999999999998876665542 455688899999999988887 7899999999998
Q ss_pred cEEEEeecCC-ce-----------------------------------------EEEEEeC--CeEEEEE-CCeEEEEEc
Q 022387 167 RCIGELSFRS-EV-----------------------------------------RSVKLRR--DRIIVVL-EQKIFVYNF 201 (298)
Q Consensus 167 ~~~~~~~~~~-~v-----------------------------------------~~v~~~~--~~l~v~~-~~~I~iwd~ 201 (298)
+.+..+..+. .+ ..+.+.+ ..++++. ++.|++||+
T Consensus 100 ~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~ 179 (318)
T 4ggc_A 100 KRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPS 179 (318)
T ss_dssp EEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEES
T ss_pred eeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEEC
Confidence 8776654322 22 2222222 1333333 478888888
Q ss_pred CCCeEE----EEEe--------------------------------------------ccCCCcceEEEEeCCCCeEEEE
Q 022387 202 ADLKLL----HQIE--------------------------------------------TIANPKGLCAVSQGVGSLVLVC 233 (298)
Q Consensus 202 ~~~~~i----~~~~--------------------------------------------~~~~~~~~~~~s~~~d~~~la~ 233 (298)
++++.. .... .+...+..+.+++..+ .++++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~ 258 (318)
T 4ggc_A 180 APGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYK-ELISG 258 (318)
T ss_dssp SCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTT-EEEEE
T ss_pred CCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeeccccc-ceEEE
Confidence 643210 0000 0111122334444433 34444
Q ss_pred ecCCCceEEEEEcCCcc-eEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCC
Q 022387 234 PGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDG 291 (298)
Q Consensus 234 sGs~dg~v~i~~~~~~~-~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg 291 (298)
+|+.||.|++||+.+.. +.++.+|.+.|++|+|+|||++|||||.||+ |||||+.+.
T Consensus 259 sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~-v~iWd~~~~ 316 (318)
T 4ggc_A 259 HGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADET-LRLWRCFEL 316 (318)
T ss_dssp ECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTE-EEEECCSCC
T ss_pred EEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCe-EEEEECCCC
Confidence 57899999999998654 5689999999999999999999999999999 999998765
No 41
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.94 E-value=7e-25 Score=202.35 Aligned_cols=206 Identities=13% Similarity=0.209 Sum_probs=144.4
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCC----------
Q 022387 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPD---------- 150 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 150 (298)
..|...|++|+|+|||++||+|+.++ |+||++++.+.+..... |...+ ..+.+++..++.++....
T Consensus 144 ~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~-h~~~v--~~~s~~~~~l~sgs~d~~i~~~d~~~~~ 220 (420)
T 4gga_A 144 EQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTS-HSARV--GSLSWNSYILSSGSRSGHIHHHDVRVAE 220 (420)
T ss_dssp CSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCE--EEEEEETTEEEEEETTSEEEEEETTSSS
T ss_pred cCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeC-CCCce--EEEeeCCCEEEEEeCCCceeEeeecccc
Confidence 45667899999999999999999866 88999999887666553 34444 444556666665541100
Q ss_pred --------------------------CCCCCCeEEEEeCCCCcE----EEE-eecCCceEEEEEeC---CeEEEEE---C
Q 022387 151 --------------------------PQYPLNKVMIWDDHQSRC----IGE-LSFRSEVRSVKLRR---DRIIVVL---E 193 (298)
Q Consensus 151 --------------------------~~~~d~~v~iWD~~~~~~----~~~-~~~~~~v~~v~~~~---~~l~v~~---~ 193 (298)
....|+.|++||..+++. +.. ..+...|.++.|++ ..+++++ +
T Consensus 221 ~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D 300 (420)
T 4gga_A 221 HHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSD 300 (420)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTT
T ss_pred eeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCC
Confidence 001244455555544321 111 12334677788765 2444443 4
Q ss_pred CeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEecCCCceEEEEEcCCcc-eEeecccccceeEEEECCCCCE
Q 022387 194 QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQL 272 (298)
Q Consensus 194 ~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~~-~~~~~~H~~~V~~l~fspdg~~ 272 (298)
++|++||+.+++++..+..+.. +..+.++++.+ .+++++|..||.|+||++.+.. +.++.+|.+.|++|+|+|||++
T Consensus 301 ~~I~iwd~~t~~~~~~~~~~~~-v~~~~~~~~~~-~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~ 378 (420)
T 4gga_A 301 RHIRIWNVCSGACLSAVDAHSQ-VCSILWSPHYK-ELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGAT 378 (420)
T ss_dssp CEEEEEETTTTEEEEEEECSSC-EEEEEEETTTT-EEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSC
T ss_pred CEEEEEeCCccccceeeccccc-eeeeeecCCCC-eEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCE
Confidence 7999999999999988887643 44455555543 3444457789999999997654 5689999999999999999999
Q ss_pred EEEEeCCCCEEEEEECCCCcE
Q 022387 273 LATSSTKGTLVRIFNTLDGTL 293 (298)
Q Consensus 273 lAt~S~Dgt~IrIWd~~tg~~ 293 (298)
|||||.|++ |||||+.+...
T Consensus 379 l~S~s~D~t-vriWdv~~~~~ 398 (420)
T 4gga_A 379 VASAAADET-LRLWRCFELDP 398 (420)
T ss_dssp EEEEETTTE-EEEECCSCSSC
T ss_pred EEEEecCCe-EEEEECCCCCc
Confidence 999999999 99999986543
No 42
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.94 E-value=3.5e-25 Score=201.00 Aligned_cols=202 Identities=11% Similarity=0.097 Sum_probs=160.1
Q ss_pred CCCCCCeEEEEEcCCC-CEEEEEcCCe-EEEEEcCCCceEEEEee-ecCCceEEEEEec-CCCEEEEEeCCCCCCCCCCe
Q 022387 82 SSPPPTLLHISFNQDH-GCFAAGTDHG-FRIYNCDPFREIFRRDF-ERGGGIGVVEMLF-RCNILALVGGGPDPQYPLNK 157 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg-~~lasgs~~g-i~vw~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~ 157 (298)
..|...|++++|+|+| ++||+|+.++ ++||++.+.+....... .|...+..+.+.+ ++..+++++ .|++
T Consensus 70 ~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~-------~d~~ 142 (383)
T 3ei3_B 70 SPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSS-------IRGA 142 (383)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEE-------TTTE
T ss_pred cCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEe-------CCCE
Confidence 5677899999999999 8999999865 88999998776555542 2577888888887 567777776 6899
Q ss_pred EEEEeCCCCcEEEEeec-C---CceEEEEEeCC--eEEEEE-CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCe-
Q 022387 158 VMIWDDHQSRCIGELSF-R---SEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSL- 229 (298)
Q Consensus 158 v~iWD~~~~~~~~~~~~-~---~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~- 229 (298)
|++||++.. .+..+.. . ..|.++.|+++ .++++. ++.|++||+ +++.+.++..|...+..+++++++ .
T Consensus 143 i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~--~~ 218 (383)
T 3ei3_B 143 TTLRDFSGS-VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRC--DW 218 (383)
T ss_dssp EEEEETTSC-EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSC--TT
T ss_pred EEEEECCCC-ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCC--CC
Confidence 999999964 4444432 2 46999999874 455554 489999999 577888998888777777776654 5
Q ss_pred EEEEecCCCceEEEEEcCC----cceEeecccccceeEEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEEe
Q 022387 230 VLVCPGLQKGQVRVEHYAS----KRTKFIMAHDSRIACFALTQ-DGQLLATSSTKGTLVRIFNTLDGTLLQE 296 (298)
Q Consensus 230 ~la~sGs~dg~v~i~~~~~----~~~~~~~~H~~~V~~l~fsp-dg~~lAt~S~Dgt~IrIWd~~tg~~l~~ 296 (298)
+++ +|+.||.|++||+.. .......+|...|++++|+| +|++||+++.|++ |+|||+++++++.+
T Consensus 219 ~l~-s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~-i~iwd~~~~~~~~~ 288 (383)
T 3ei3_B 219 LMA-TSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNE-IRVYSSYDWSKPDQ 288 (383)
T ss_dssp EEE-EEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSE-EEEEETTBTTSCSE
T ss_pred EEE-EEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCc-EEEEECCCCccccc
Confidence 565 589999999999986 44444347999999999999 9999999999999 99999999876544
No 43
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.94 E-value=6.4e-25 Score=199.64 Aligned_cols=159 Identities=13% Similarity=0.066 Sum_probs=125.5
Q ss_pred eEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCCcEEEEeecCCceEEEEEeCC--eEEEEECCeEEEEEcCCCeEE
Q 022387 130 IGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRD--RIIVVLEQKIFVYNFADLKLL 207 (298)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~~~~~~~~~~~v~~v~~~~~--~l~v~~~~~I~iwd~~~~~~i 207 (298)
+.++++++++..+++++++ .|++|+|||+++++++.++.+...|.+++|+++ .++++.++.+++|+..+++.+
T Consensus 136 ~~~v~fSpDg~~la~as~~-----~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~ 210 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSK-----VPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCI 210 (365)
T ss_dssp EEEEEECTTSSCEEEEESC-----SSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEE
T ss_pred EEEEEEcCCCCEEEEEECC-----CCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccceeEEEEEeccCcce
Confidence 4467778888888888866 479999999999999999998889999999986 455566788999998877765
Q ss_pred EEEe--ccCCCcceEEEEeCCCCeEEEEecCCCc----eEEEEEcCCcc-----eEeecccccceeEEEECCCCCEEEEE
Q 022387 208 HQIE--TIANPKGLCAVSQGVGSLVLVCPGLQKG----QVRVEHYASKR-----TKFIMAHDSRIACFALTQDGQLLATS 276 (298)
Q Consensus 208 ~~~~--~~~~~~~~~~~s~~~d~~~la~sGs~dg----~v~i~~~~~~~-----~~~~~~H~~~V~~l~fspdg~~lAt~ 276 (298)
.... .|...+..++|+++ +.++++ ++.++ .+++|+..... ...+.+|...|++|+|||||++||+|
T Consensus 211 ~~~~~~~~~~~v~~v~fspd--g~~l~~-~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasg 287 (365)
T 4h5i_A 211 ARKTDFDKNWSLSKINFIAD--DTVLIA-ASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLA 287 (365)
T ss_dssp EEECCCCTTEEEEEEEEEET--TEEEEE-EEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEE
T ss_pred eeeecCCCCCCEEEEEEcCC--CCEEEE-EecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEE
Confidence 5433 34444555666665 477774 55555 56668876543 23677899999999999999999999
Q ss_pred eCCCCEEEEEECCCCcEEEec
Q 022387 277 STKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 277 S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
|.|++ |+|||++++++++++
T Consensus 288 s~D~~-V~iwd~~~~~~~~~~ 307 (365)
T 4h5i_A 288 SNDNS-IALVKLKDLSMSKIF 307 (365)
T ss_dssp ETTSC-EEEEETTTTEEEEEE
T ss_pred cCCCE-EEEEECCCCcEEEEe
Confidence 99999 999999999998875
No 44
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=3.8e-25 Score=198.78 Aligned_cols=203 Identities=17% Similarity=0.181 Sum_probs=157.4
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeee-cCCceEEEEEecC--CCEEEEEeCCCCCCCCCC
Q 022387 81 SSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFE-RGGGIGVVEMLFR--CNILALVGGGPDPQYPLN 156 (298)
Q Consensus 81 ~~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~ 156 (298)
...|...|++++|+|||++||+|+.++ ++||+++.........+. |...+..+.+.++ ++.+++++ .|+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~-------~dg 79 (379)
T 3jrp_A 7 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCS-------YDG 79 (379)
T ss_dssp EEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE-------TTS
T ss_pred ecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEec-------cCC
Confidence 457888999999999999999998765 889999854433333332 6778888888766 77888877 689
Q ss_pred eEEEEeCCCCc--EEEEee-cCCceEEEEEeCC----eEEEEE-CCeEEEEEcCCCe--EEEEEeccCCCcceEEEEeCC
Q 022387 157 KVMIWDDHQSR--CIGELS-FRSEVRSVKLRRD----RIIVVL-EQKIFVYNFADLK--LLHQIETIANPKGLCAVSQGV 226 (298)
Q Consensus 157 ~v~iWD~~~~~--~~~~~~-~~~~v~~v~~~~~----~l~v~~-~~~I~iwd~~~~~--~i~~~~~~~~~~~~~~~s~~~ 226 (298)
.|++||+.+++ .+..+. +...|.++.|+++ .++++. ++.|++||+.+.+ ....+..|...+..+++++..
T Consensus 80 ~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 159 (379)
T 3jrp_A 80 KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 159 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC
T ss_pred EEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcc
Confidence 99999999986 445554 4468999999875 455554 5899999997763 334555666666666666531
Q ss_pred -----------CCeEEEEecCCCceEEEEEcCCcc-----eEeecccccceeEEEECCC---CCEEEEEeCCCCEEEEEE
Q 022387 227 -----------GSLVLVCPGLQKGQVRVEHYASKR-----TKFIMAHDSRIACFALTQD---GQLLATSSTKGTLVRIFN 287 (298)
Q Consensus 227 -----------d~~~la~sGs~dg~v~i~~~~~~~-----~~~~~~H~~~V~~l~fspd---g~~lAt~S~Dgt~IrIWd 287 (298)
++.++++ |+.||.|++|++.... ...+.+|...|++++|+|+ +++||+++.||+ |+|||
T Consensus 160 ~~~~~~~~~~~~~~~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~-i~iwd 237 (379)
T 3jrp_A 160 IEEDGEHNGTKESRKFVT-GGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRT-CIIWT 237 (379)
T ss_dssp ----------CTTCEEEE-EETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSC-EEEEE
T ss_pred ccccccccCCCCCCEEEE-EeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCE-EEEEe
Confidence 4577774 8999999999987542 2467899999999999999 999999999999 99999
Q ss_pred CCCCc
Q 022387 288 TLDGT 292 (298)
Q Consensus 288 ~~tg~ 292 (298)
+++++
T Consensus 238 ~~~~~ 242 (379)
T 3jrp_A 238 QDNEQ 242 (379)
T ss_dssp ESSTT
T ss_pred CCCCC
Confidence 99874
No 45
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.94 E-value=9e-25 Score=196.34 Aligned_cols=199 Identities=11% Similarity=0.090 Sum_probs=153.9
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEE
Q 022387 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i 160 (298)
..|...|.+++|+|++.+|++|+.|+ ++|||+.+.+.+..... |...+..+.+.+++..+++++ .|++|++
T Consensus 73 ~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~-h~~~v~~v~~sp~~~~l~s~~-------~d~~i~~ 144 (343)
T 2xzm_R 73 TGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVG-HQSEVYSVAFSPDNRQILSAG-------AEREIKL 144 (343)
T ss_dssp CCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEEC-CCSCEEEEEECSSTTEEEEEE-------TTSCEEE
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcC-CCCcEEEEEECCCCCEEEEEc-------CCCEEEE
Confidence 46778999999999999999999755 88999998877655543 678899999999999888887 6899999
Q ss_pred EeCCCCcEEEEe---ecCCceEEEEEeCC------------eEEEEE-CCeEEEEEcCCCeEEEEEeccCCCcceEEEEe
Q 022387 161 WDDHQSRCIGEL---SFRSEVRSVKLRRD------------RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQ 224 (298)
Q Consensus 161 WD~~~~~~~~~~---~~~~~v~~v~~~~~------------~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~ 224 (298)
||+......... .+...|.++.|+++ .++++. ++.|++|| .+.+...++..|...+..+++++
T Consensus 145 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~ 223 (343)
T 2xzm_R 145 WNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISP 223 (343)
T ss_dssp EESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECT
T ss_pred EeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECC
Confidence 999854333222 23457999999875 344444 58999999 45677788888877766666655
Q ss_pred CCCCeEEEEecCCCceEEEEEcC-CcceEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEE
Q 022387 225 GVGSLVLVCPGLQKGQVRVEHYA-SKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLL 294 (298)
Q Consensus 225 ~~d~~~la~sGs~dg~v~i~~~~-~~~~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l 294 (298)
++.+|| +|+.||.|++||+. .........|...|++|+|+|++++||+++ |+. |+|||+.+++.+
T Consensus 224 --~g~~l~-sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~~-d~~-v~iw~~~~~~~~ 289 (343)
T 2xzm_R 224 --NGKYIA-TGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVGT-DQG-VKIFNLMTQSKA 289 (343)
T ss_dssp --TSSEEE-EEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEEE-SSC-EEEEESSSCCSC
T ss_pred --CCCEEE-EEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEEC-CCC-EEEEEeCCCCCC
Confidence 558888 59999999999984 333323334566799999999999887664 888 999999887643
No 46
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=2.1e-25 Score=225.09 Aligned_cols=200 Identities=9% Similarity=0.117 Sum_probs=160.1
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEE
Q 022387 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i 160 (298)
..|...|++++|+|||++||+|+.+| |+||+....+...... |...+..+.+++ +..+++++ .|++|+|
T Consensus 14 ~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~--~~~~V~~l~fsp-g~~L~S~s-------~D~~v~l 83 (902)
T 2oaj_A 14 YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE--DRSAIKEMRFVK-GIYLVVIN-------AKDTVYV 83 (902)
T ss_dssp EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECS--SCCCEEEEEEET-TTEEEEEE-------TTCEEEE
T ss_pred cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcC--CCCCEEEEEEcC-CCEEEEEE-------CcCeEEE
Confidence 46778999999999999999999866 8899988766544433 567788899888 66677776 6899999
Q ss_pred EeCCCCcEEEEeecCCceEEEEEeCC--eEEEEE-CCeEEEEEcCCCeEE-----------EEEeccCCCcceEEEEeCC
Q 022387 161 WDDHQSRCIGELSFRSEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLL-----------HQIETIANPKGLCAVSQGV 226 (298)
Q Consensus 161 WD~~~~~~~~~~~~~~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~~~i-----------~~~~~~~~~~~~~~~s~~~ 226 (298)
||+++++++..+.+...|.++.|+++ .++++. ++.|++||+.+.++. ..+..|..++..++++++.
T Consensus 84 Wd~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~ 163 (902)
T 2oaj_A 84 LSLYSQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRD 163 (902)
T ss_dssp EETTTCSEEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTE
T ss_pred EECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCC
Confidence 99999999988888889999999875 455554 589999999888763 1223455666677776642
Q ss_pred CCeEEEEecCCCceEEEEEcCCcce-Eeeccc------------------ccceeEEEECCCCCEEEEEeCCCCEEEEEE
Q 022387 227 GSLVLVCPGLQKGQVRVEHYASKRT-KFIMAH------------------DSRIACFALTQDGQLLATSSTKGTLVRIFN 287 (298)
Q Consensus 227 d~~~la~sGs~dg~v~i~~~~~~~~-~~~~~H------------------~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd 287 (298)
...++ +|+.||.| +||+..... ..+..| ...|++|+|+|||++||||+.||+ |+|||
T Consensus 164 -~~~l~-~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~-i~lWd 239 (902)
T 2oaj_A 164 -IGTVL-ISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNS-LVFWD 239 (902)
T ss_dssp -EEEEE-EECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCC-EEEEE
T ss_pred -CCEEE-EEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCe-EEEEE
Confidence 24555 48999999 999987654 355544 578999999999999999999999 99999
Q ss_pred CCCCcEEE
Q 022387 288 TLDGTLLQ 295 (298)
Q Consensus 288 ~~tg~~l~ 295 (298)
+++|+++.
T Consensus 240 ~~~g~~~~ 247 (902)
T 2oaj_A 240 ANSGHMIM 247 (902)
T ss_dssp TTTCCEEE
T ss_pred CCCCcEEE
Confidence 99998865
No 47
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.94 E-value=4.2e-24 Score=188.90 Aligned_cols=202 Identities=9% Similarity=0.149 Sum_probs=164.6
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeee-cCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEE
Q 022387 83 SPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFE-RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (298)
Q Consensus 83 ~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i 160 (298)
.|...|.+++|+|++++|++|+.++ +++|+++..+......+. |...+..+.+.+++..+++++ .|+.|++
T Consensus 95 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-------~dg~v~~ 167 (337)
T 1gxr_A 95 NRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCC-------SDGNIAV 167 (337)
T ss_dssp CTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEE-------TTSCEEE
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEe-------CCCcEEE
Confidence 5677999999999999999998755 889999887633333221 566788888888888888877 6799999
Q ss_pred EeCCCCcEEEEeec-CCceEEEEEeCC--eEEEEE-CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEecC
Q 022387 161 WDDHQSRCIGELSF-RSEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGL 236 (298)
Q Consensus 161 WD~~~~~~~~~~~~-~~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs 236 (298)
||+++++.+..+.. ...+.++.|+++ .++++. ++.|++||+++++.+..+. +...+.. +.+++++.++++ |+
T Consensus 168 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~--~~~s~~~~~l~~-~~ 243 (337)
T 1gxr_A 168 WDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFS--LGYCPTGEWLAV-GM 243 (337)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEE--EEECTTSSEEEE-EE
T ss_pred EeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEE--EEECCCCCEEEE-Ec
Confidence 99999998888774 468999999875 455554 5899999999999887765 3344444 444555678885 88
Q ss_pred CCceEEEEEcCCcceEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEe
Q 022387 237 QKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQE 296 (298)
Q Consensus 237 ~dg~v~i~~~~~~~~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~ 296 (298)
.+|.|++|+........+..|...|++++|+|+|++|++++.||. |+|||+.+++.+..
T Consensus 244 ~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-i~~~~~~~~~~~~~ 302 (337)
T 1gxr_A 244 ESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNL-LNAWRTPYGASIFQ 302 (337)
T ss_dssp TTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSE-EEEEETTTCCEEEE
T ss_pred CCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCc-EEEEECCCCeEEEE
Confidence 999999999998888888999999999999999999999999999 99999999987754
No 48
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.94 E-value=1.5e-24 Score=191.54 Aligned_cols=198 Identities=14% Similarity=0.204 Sum_probs=161.1
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEE
Q 022387 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i 160 (298)
..|...|.+++|+|++++|++|+.++ +++||+.+.+.+..... |...+..+.+.+++..+++++ .|+.|++
T Consensus 104 ~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-------~d~~i~~ 175 (312)
T 4ery_A 104 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA-HSDPVSAVHFNRDGSLIVSSS-------YDGLCRI 175 (312)
T ss_dssp ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEE-------TTSCEEE
T ss_pred cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecC-CCCcEEEEEEcCCCCEEEEEe-------CCCcEEE
Confidence 56778999999999999999999865 88999998877655543 577888889988888888877 6899999
Q ss_pred EeCCCCcEEEEeec--CCceEEEEEeCC--eEEEEE-CCeEEEEEcCCCeEEEEEeccCCCcceEEEEe-CCCCeEEEEe
Q 022387 161 WDDHQSRCIGELSF--RSEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQ-GVGSLVLVCP 234 (298)
Q Consensus 161 WD~~~~~~~~~~~~--~~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~-~~d~~~la~s 234 (298)
||+++++.+..+.. ...+..+.|+++ .++++. ++.|++||+++++.+..+..|......+.... .+++.+++ +
T Consensus 176 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-s 254 (312)
T 4ery_A 176 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV-S 254 (312)
T ss_dssp EETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEE-E
T ss_pred EECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEE-E
Confidence 99999988777643 347888999875 455544 58999999999999999988766544432222 23456776 5
Q ss_pred cCCCceEEEEEcCCcce-EeecccccceeEEEECCCCCEEEEEe--CCCCEEEEEECC
Q 022387 235 GLQKGQVRVEHYASKRT-KFIMAHDSRIACFALTQDGQLLATSS--TKGTLVRIFNTL 289 (298)
Q Consensus 235 Gs~dg~v~i~~~~~~~~-~~~~~H~~~V~~l~fspdg~~lAt~S--~Dgt~IrIWd~~ 289 (298)
|+.||.|++|++..+.+ ..+.+|...|.+++|+|++++||+++ .|++ |+||+..
T Consensus 255 g~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~-i~~W~~d 311 (312)
T 4ery_A 255 GSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKT-IKLWKSD 311 (312)
T ss_dssp CCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCC-EEEEECC
T ss_pred ECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCcc-EEEecCC
Confidence 99999999999987664 58899999999999999999999997 6999 9999964
No 49
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.8e-25 Score=206.47 Aligned_cols=206 Identities=12% Similarity=0.202 Sum_probs=157.4
Q ss_pred cccCCCCCCeEEEEEcC-CCCEEEEEcCCe-EEEEEcCC---Cc---eEEEEeeecCCceEEEEEecCCCEEEEEeCCCC
Q 022387 79 STSSSPPPTLLHISFNQ-DHGCFAAGTDHG-FRIYNCDP---FR---EIFRRDFERGGGIGVVEMLFRCNILALVGGGPD 150 (298)
Q Consensus 79 ~~~~~~~~~V~~v~fs~-dg~~lasgs~~g-i~vw~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (298)
.+...|...|++++|+| ||++||+|+.|+ ++||++.+ .. ...... |.+.+..+.+.+++..+++++
T Consensus 57 ~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~s---- 130 (437)
T 3gre_A 57 TLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYD--CSSTVTQITMIPNFDAFAVSS---- 130 (437)
T ss_dssp EECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEE--CSSCEEEEEECTTSSEEEEEE----
T ss_pred eeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeecc--CCCCEEEEEEeCCCCEEEEEe----
Confidence 34366888999999999 999999999866 88999866 22 222322 688899999998888888887
Q ss_pred CCCCCCeEEEEeCC---CCcEEEEee-------------cCCceEEEEE--eC--CeEEEEE-CCeEEEEEcCCCeEEEE
Q 022387 151 PQYPLNKVMIWDDH---QSRCIGELS-------------FRSEVRSVKL--RR--DRIIVVL-EQKIFVYNFADLKLLHQ 209 (298)
Q Consensus 151 ~~~~d~~v~iWD~~---~~~~~~~~~-------------~~~~v~~v~~--~~--~~l~v~~-~~~I~iwd~~~~~~i~~ 209 (298)
.|++|++||+. +++.+..+. ....+.++.+ ++ ..++++. ++.|++||+++++++.+
T Consensus 131 ---~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 207 (437)
T 3gre_A 131 ---KDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQI 207 (437)
T ss_dssp ---TTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEE
T ss_pred ---CCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEE
Confidence 78999999995 554444332 2224555553 23 3455554 48999999999999999
Q ss_pred Eec--cCCCcceEEEEeCCCCeEEEEecCCCceEEEEEcCCcce-Eeec-ccccceeEEEEC----CCCCEEEEEeCCCC
Q 022387 210 IET--IANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRT-KFIM-AHDSRIACFALT----QDGQLLATSSTKGT 281 (298)
Q Consensus 210 ~~~--~~~~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~~~-~~~~-~H~~~V~~l~fs----pdg~~lAt~S~Dgt 281 (298)
+.. |...+..++++ +++.+|+ +|+.||.|++||+..... .++. .|...|++|+|+ |++++||+|+.||+
T Consensus 208 ~~~~~h~~~v~~~~~s--~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~ 284 (437)
T 3gre_A 208 IENSPRHGAVSSICID--EECCVLI-LGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTF 284 (437)
T ss_dssp EECCGGGCCEEEEEEC--TTSCEEE-EEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEE
T ss_pred EccCCCCCceEEEEEC--CCCCEEE-EEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCc
Confidence 988 56655555554 4568888 499999999999987654 4555 788899999555 57889999999999
Q ss_pred EEEEEECCCCcEEEec
Q 022387 282 LVRIFNTLDGTLLQEG 297 (298)
Q Consensus 282 ~IrIWd~~tg~~l~~~ 297 (298)
|+|||++++++++++
T Consensus 285 -i~iwd~~~~~~~~~~ 299 (437)
T 3gre_A 285 -LTIWNFVKGHCQYAF 299 (437)
T ss_dssp -EEEEETTTTEEEEEE
T ss_pred -EEEEEcCCCcEEEEE
Confidence 999999999988765
No 50
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.94 E-value=2.6e-25 Score=202.87 Aligned_cols=204 Identities=15% Similarity=0.173 Sum_probs=154.8
Q ss_pred cCCCCCCeEEEEEcCCC-CEEEEEcCCe-EEEEEcCCCceEEEEee----ecCCceEEEEEec-CCCEEEEEeCCCCCCC
Q 022387 81 SSSPPPTLLHISFNQDH-GCFAAGTDHG-FRIYNCDPFREIFRRDF----ERGGGIGVVEMLF-RCNILALVGGGPDPQY 153 (298)
Q Consensus 81 ~~~~~~~V~~v~fs~dg-~~lasgs~~g-i~vw~~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 153 (298)
...|...|.++.|+|++ .+|++|+.|+ +++||+.+.+.+..... .|...+..+.+.. +++.+++++
T Consensus 153 ~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs------- 225 (380)
T 3iz6_a 153 LTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGS------- 225 (380)
T ss_dssp CCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEE-------
T ss_pred ccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEE-------
Confidence 45778899999999974 5788888755 89999998876554421 1455666666654 567777766
Q ss_pred CCCeEEEEeCCC-CcEEEEeec-CCceEEEEEeCC--eEEEEE-CCeEEEEEcCCCeEEEEEeccCCC-----cceEEEE
Q 022387 154 PLNKVMIWDDHQ-SRCIGELSF-RSEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIETIANP-----KGLCAVS 223 (298)
Q Consensus 154 ~d~~v~iWD~~~-~~~~~~~~~-~~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~-----~~~~~~s 223 (298)
.|++|++||++. ++.+..+.. ...|.++.|+++ .++++. +++|++||+++++.+..+..+... ..+.++.
T Consensus 226 ~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 305 (380)
T 3iz6_a 226 CDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVA 305 (380)
T ss_dssp TTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEE
T ss_pred CCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEE
Confidence 689999999984 566666654 468999999986 344444 589999999999998888654321 1123444
Q ss_pred eCCCCeEEEEecCCCceEEEEEcCCcce-Eee----cccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcE
Q 022387 224 QGVGSLVLVCPGLQKGQVRVEHYASKRT-KFI----MAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTL 293 (298)
Q Consensus 224 ~~~d~~~la~sGs~dg~v~i~~~~~~~~-~~~----~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~ 293 (298)
+++++.++++ |+.||.|++||...... ..+ .+|...|++|+|+|||++|||||.|++ |+||++..++.
T Consensus 306 ~s~~g~~l~~-g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~-i~iW~~~~~~~ 378 (380)
T 3iz6_a 306 FSISGRLLFA-GYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKN-LKIWAFSGHRK 378 (380)
T ss_dssp ECSSSSEEEE-ECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSC-EEEEECCSSSS
T ss_pred ECCCCCEEEE-EECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCC-EEEEecCCCcc
Confidence 4455688884 99999999999876543 344 689999999999999999999999999 99999987754
No 51
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.94 E-value=1.4e-24 Score=210.09 Aligned_cols=203 Identities=14% Similarity=0.189 Sum_probs=164.6
Q ss_pred CCCCCCeEEEEEcCCCC-EEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEE
Q 022387 82 SSPPPTLLHISFNQDHG-CFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg~-~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~ 159 (298)
..|...|++++|+|++. +|++|+.|+ +++|+..+.+....... |...+..+.+++++..+++++ .|++|+
T Consensus 144 ~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~-H~~~V~~v~fspdg~~las~s-------~D~~i~ 215 (611)
T 1nr0_A 144 TGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGE-HTKFVHSVRYNPDGSLFASTG-------GDGTIV 215 (611)
T ss_dssp CCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECC-CSSCEEEEEECTTSSEEEEEE-------TTSCEE
T ss_pred cCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeecc-ccCceEEEEECCCCCEEEEEE-------CCCcEE
Confidence 56788999999999997 599998855 89999988766544443 677899999999999888888 789999
Q ss_pred EEeCCCCcEEEEee--------cCCceEEEEEeCC--eEEEEE-CCeEEEEEcCCCeEEEEEeccCCC-cceEEEEeCCC
Q 022387 160 IWDDHQSRCIGELS--------FRSEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIETIANP-KGLCAVSQGVG 227 (298)
Q Consensus 160 iWD~~~~~~~~~~~--------~~~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~-~~~~~~s~~~d 227 (298)
|||..+++.+..+. +...|.+++|+++ .++++. +++|++||+.+++++.++..+... .....+.+++
T Consensus 216 lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~- 294 (611)
T 1nr0_A 216 LYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTK- 294 (611)
T ss_dssp EEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECS-
T ss_pred EEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcC-
Confidence 99999999888773 4568999999975 455554 589999999999999888754321 2234444543
Q ss_pred CeEEEEecCCCceEEEEEcCCcc-eEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEe
Q 022387 228 SLVLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQE 296 (298)
Q Consensus 228 ~~~la~sGs~dg~v~i~~~~~~~-~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~ 296 (298)
..++ +++.||.+++|+..... ...+.+|...|++|+|+|||++|||++.|++ |+|||+.++++.+.
T Consensus 295 -~~l~-s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~-v~~Wd~~~~~~~~~ 361 (611)
T 1nr0_A 295 -QALV-SISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGH-INSWDISTGISNRV 361 (611)
T ss_dssp -SCEE-EEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTTCCEEEC
T ss_pred -CEEE-EEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCc-EEEEECCCCceeee
Confidence 5565 48999999999988765 3478899999999999999999999999999 99999999887653
No 52
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.94 E-value=7.9e-27 Score=211.02 Aligned_cols=197 Identities=12% Similarity=0.089 Sum_probs=147.2
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCc--eEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEE
Q 022387 84 PPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFR--EIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (298)
Q Consensus 84 ~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i 160 (298)
+..+|++++|+|||++||+|+.++ ++||++.+.. ....... |...+..+.+.++++.+++++ .|++|++
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~s-------~d~~v~v 81 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSD-HDKIVTCVDWAPKSNRIVTCS-------QDRNAYV 81 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCC-CSSCEEEEEECTTTCCEEEEE-------TTSSEEE
T ss_pred CCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEec-CCceEEEEEEeCCCCEEEEEe-------CCCeEEE
Confidence 456899999999999999998755 8899999873 3222222 677889999999888888888 6899999
Q ss_pred EeCCCCc---EEEEe-ecCCceEEEEEeCC--eEEEEE-CCeEEEEEcCCCe---EEEEEec-cCCCcceEEEEeCCCCe
Q 022387 161 WDDHQSR---CIGEL-SFRSEVRSVKLRRD--RIIVVL-EQKIFVYNFADLK---LLHQIET-IANPKGLCAVSQGVGSL 229 (298)
Q Consensus 161 WD~~~~~---~~~~~-~~~~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~~---~i~~~~~-~~~~~~~~~~s~~~d~~ 229 (298)
||+.+++ ....+ .+...|.++.|+++ .++++. ++.|++||+++.+ .++.+.. |...+..+++++ ++.
T Consensus 82 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~ 159 (377)
T 3dwl_C 82 YEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHP--NNV 159 (377)
T ss_dssp C------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECT--TSS
T ss_pred EEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcC--CCC
Confidence 9999876 33333 45568999999864 455555 5899999998776 3677776 666666666655 557
Q ss_pred EEEEecCCCceEEEEEcCC-------------------cceEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCC
Q 022387 230 VLVCPGLQKGQVRVEHYAS-------------------KRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLD 290 (298)
Q Consensus 230 ~la~sGs~dg~v~i~~~~~-------------------~~~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~t 290 (298)
+|+ +|+.||.|++|++.. ..+..+ +|...|++++|+|+|++||+++.||+ |+|||+++
T Consensus 160 ~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~-i~iwd~~~ 236 (377)
T 3dwl_C 160 LLA-AGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSS-VTIAYPSA 236 (377)
T ss_dssp EEE-EEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTE-EC-CEECS
T ss_pred EEE-EEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCc-EEEEECCC
Confidence 887 489999999999852 123355 89999999999999999999999999 99999999
Q ss_pred CcE
Q 022387 291 GTL 293 (298)
Q Consensus 291 g~~ 293 (298)
+++
T Consensus 237 ~~~ 239 (377)
T 3dwl_C 237 PEQ 239 (377)
T ss_dssp TTS
T ss_pred CCC
Confidence 876
No 53
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.94 E-value=1.8e-24 Score=206.27 Aligned_cols=200 Identities=18% Similarity=0.258 Sum_probs=162.9
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEE
Q 022387 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i 160 (298)
..|...|.+++|+|||++||+|+.++ +++|+.. .+.+..... |...+..+.+++++..+++++ .|+.|++
T Consensus 341 ~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~-~~~~~~~~~-~~~~v~~~~~s~dg~~l~~~~-------~d~~v~~ 411 (577)
T 2ymu_A 341 TGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQTLTG-HSSSVRGVAFSPDGQTIASAS-------DDKTVKL 411 (577)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-CCEEEEEEC-CSSCEEEEEECTTSSCEEEEE-------TTSEEEE
T ss_pred eCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCC-CCEEEEecC-CCCCeEEEEECCCCCEEEEEe-------CCCEEEE
Confidence 45678999999999999999999866 7899964 344333332 678888999999999988887 6899999
Q ss_pred EeCCCCcEEEEeec-CCceEEEEEeCC--eEEEEE-CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEecC
Q 022387 161 WDDHQSRCIGELSF-RSEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGL 236 (298)
Q Consensus 161 WD~~~~~~~~~~~~-~~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs 236 (298)
||. +++.+..+.. ...|.++.|+++ .++++. ++.|++||. +.+.+.++..|...+..++|++ ++.+|| +|+
T Consensus 412 ~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~sp--d~~~la-s~~ 486 (577)
T 2ymu_A 412 WNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSP--DGQTIA-SAS 486 (577)
T ss_dssp ECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECT--TSCEEE-EEE
T ss_pred EeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcC--CCCEEE-EEe
Confidence 996 4566666554 468999999875 444444 589999996 5677888888887776666665 558888 489
Q ss_pred CCceEEEEEcCCcceEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 237 QKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 237 ~dg~v~i~~~~~~~~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
.||.|++|+.+.+.+..+.+|...|++|+|+|||++||+++.||+ |+|||. +|++++++
T Consensus 487 ~d~~i~iw~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~-v~lwd~-~~~~~~~~ 545 (577)
T 2ymu_A 487 DDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKT-VKLWNR-NGQLLQTL 545 (577)
T ss_dssp TTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSE-EEEECT-TSCEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCE-EEEEeC-CCCEEEEE
Confidence 999999999887778899999999999999999999999999999 999995 67777664
No 54
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.94 E-value=8.5e-25 Score=196.45 Aligned_cols=203 Identities=13% Similarity=0.084 Sum_probs=159.1
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCc--eEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEE
Q 022387 83 SPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFR--EIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (298)
Q Consensus 83 ~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~ 159 (298)
.|..+|++++|+|||++||+|+.++ ++||++++.+ ....... |...+..+.+.+++..+++++ .|++|+
T Consensus 6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~~~~-------~dg~i~ 77 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKE-HNGQVTGVDWAPDSNRIVTCG-------TDRNAY 77 (372)
T ss_dssp SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEEC-CSSCEEEEEEETTTTEEEEEE-------TTSCEE
T ss_pred ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecC-CCCcccEEEEeCCCCEEEEEc-------CCCeEE
Confidence 4677999999999999999997755 8899999886 4333332 678899999999999888887 679999
Q ss_pred EEeCCCCcEEEEe---ecCCceEEEEEeCC--eEEEEE-CCeEEEEEcCCCeE---EEEE-eccCCCcceEEEEeCCCCe
Q 022387 160 IWDDHQSRCIGEL---SFRSEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKL---LHQI-ETIANPKGLCAVSQGVGSL 229 (298)
Q Consensus 160 iWD~~~~~~~~~~---~~~~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~~~---i~~~-~~~~~~~~~~~~s~~~d~~ 229 (298)
+||+.+++....+ .+...|.++.|+++ .++++. ++.|++||+...+. ...+ ..|...+..+++ .+++.
T Consensus 78 vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~ 155 (372)
T 1k8k_C 78 VWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDW--HPNSV 155 (372)
T ss_dssp EEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEE--CTTSS
T ss_pred EEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEE--cCCCC
Confidence 9999988755443 34568999999865 455555 48999999976652 3333 234444444454 45567
Q ss_pred EEEEecCCCceEEEEEcC------------------C-cceEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCC
Q 022387 230 VLVCPGLQKGQVRVEHYA------------------S-KRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLD 290 (298)
Q Consensus 230 ~la~sGs~dg~v~i~~~~------------------~-~~~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~t 290 (298)
++++ |+.||.|++|++. . ..+..+..|...|++++|+|++++|++++.||. |+|||+++
T Consensus 156 ~l~~-~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-i~i~d~~~ 233 (372)
T 1k8k_C 156 LLAA-GSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDST-VCLADADK 233 (372)
T ss_dssp EEEE-EETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTE-EEEEEGGG
T ss_pred EEEE-EcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCE-EEEEECCC
Confidence 8874 8999999999953 2 345578899999999999999999999999999 99999999
Q ss_pred CcEEEec
Q 022387 291 GTLLQEG 297 (298)
Q Consensus 291 g~~l~~~ 297 (298)
+++++++
T Consensus 234 ~~~~~~~ 240 (372)
T 1k8k_C 234 KMAVATL 240 (372)
T ss_dssp TTEEEEE
T ss_pred CceeEEE
Confidence 9988765
No 55
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.94 E-value=1e-24 Score=197.79 Aligned_cols=203 Identities=13% Similarity=0.147 Sum_probs=164.0
Q ss_pred CCCCCCeEEEEEcC-CCCEEEEEcCCe-EEEEEcCCCceEEEEee------------ecCCceEEEEEec-CCCEEEEEe
Q 022387 82 SSPPPTLLHISFNQ-DHGCFAAGTDHG-FRIYNCDPFREIFRRDF------------ERGGGIGVVEMLF-RCNILALVG 146 (298)
Q Consensus 82 ~~~~~~V~~v~fs~-dg~~lasgs~~g-i~vw~~~~~~~~~~~~~------------~~~~~~~~~~~~~-~~~~~~~~~ 146 (298)
..|...|++++|+| +|++||+|+.+| ++||+++.......... .|...+..+.+.+ +...+++++
T Consensus 40 ~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~ 119 (408)
T 4a11_B 40 RIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSS 119 (408)
T ss_dssp CCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEE
T ss_pred eccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEe
Confidence 45788999999999 999999999866 88999987654322210 1567888888887 666777777
Q ss_pred CCCCCCCCCCeEEEEeCCCCcEEEEeecCCceEEEEEeCC-----eEEEEE-CCeEEEEEcCCCeEEEEEeccCCCcceE
Q 022387 147 GGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRD-----RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLC 220 (298)
Q Consensus 147 ~~~~~~~~d~~v~iWD~~~~~~~~~~~~~~~v~~v~~~~~-----~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~~~~~ 220 (298)
.|+.|++||+.+++.+..+.+...+.++.+.+. .++++. ++.|++||+.+++.+..+..|...+..+
T Consensus 120 -------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~ 192 (408)
T 4a11_B 120 -------FDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAV 192 (408)
T ss_dssp -------TTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEE
T ss_pred -------CCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEE
Confidence 679999999999999999998889999998753 455544 5899999999999999998888777777
Q ss_pred EEEeCCCCe-EEEEecCCCceEEEEEcCCcc--eEee---------------cccccceeEEEECCCCCEEEEEeCCCCE
Q 022387 221 AVSQGVGSL-VLVCPGLQKGQVRVEHYASKR--TKFI---------------MAHDSRIACFALTQDGQLLATSSTKGTL 282 (298)
Q Consensus 221 ~~s~~~d~~-~la~sGs~dg~v~i~~~~~~~--~~~~---------------~~H~~~V~~l~fspdg~~lAt~S~Dgt~ 282 (298)
++++++ . +++ +|+.||.|++|++.... ...+ ..|...|++++|+|+|++||+++.||.
T Consensus 193 ~~~~~~--~~ll~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~- 268 (408)
T 4a11_B 193 SWSPRY--DYILA-TASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNR- 268 (408)
T ss_dssp EECSSC--TTEEE-EEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSC-
T ss_pred EECCCC--CcEEE-EEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCe-
Confidence 776654 4 455 48999999999986542 2222 679999999999999999999999999
Q ss_pred EEEEECCCCcEEE
Q 022387 283 VRIFNTLDGTLLQ 295 (298)
Q Consensus 283 IrIWd~~tg~~l~ 295 (298)
|+|||+.+++.+.
T Consensus 269 i~vwd~~~~~~~~ 281 (408)
T 4a11_B 269 MRLWNSSNGENTL 281 (408)
T ss_dssp EEEEETTTCCBCC
T ss_pred EEEEECCCCccce
Confidence 9999999987643
No 56
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.94 E-value=6.9e-25 Score=195.06 Aligned_cols=203 Identities=12% Similarity=0.081 Sum_probs=158.8
Q ss_pred CCCCCeEEEEEcCCCC-EEEEEcCCe-EEEEEc-CCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEE
Q 022387 83 SPPPTLLHISFNQDHG-CFAAGTDHG-FRIYNC-DPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (298)
Q Consensus 83 ~~~~~V~~v~fs~dg~-~lasgs~~g-i~vw~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~ 159 (298)
.|...|.+++|+|+++ +|++|+.++ +++|++ ...+........|...+..+.+.+ ++.+++++ .|+.|+
T Consensus 54 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~-------~d~~i~ 125 (342)
T 1yfq_A 54 RYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAAS-------WDGLIE 125 (342)
T ss_dssp ECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEE-------TTSEEE
T ss_pred ecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEc-------CCCeEE
Confidence 5667999999999999 999999765 889999 776542211100466788888888 78888777 679999
Q ss_pred EEeCCC---------CcEEEEeecCCceEEEEEeCCeEEEEEC-CeEEEEEcCC-CeEE--EEEeccCCCcceEEEEeCC
Q 022387 160 IWDDHQ---------SRCIGELSFRSEVRSVKLRRDRIIVVLE-QKIFVYNFAD-LKLL--HQIETIANPKGLCAVSQGV 226 (298)
Q Consensus 160 iWD~~~---------~~~~~~~~~~~~v~~v~~~~~~l~v~~~-~~I~iwd~~~-~~~i--~~~~~~~~~~~~~~~s~~~ 226 (298)
+||+++ ++.+..+.+...|.++.|+++.++++.. +.|++||+++ ++.. .....+...+..+++ .+
T Consensus 126 iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~--~~ 203 (342)
T 1yfq_A 126 VIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVAL--LP 203 (342)
T ss_dssp EECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEE--CS
T ss_pred EEcccccccccccccCCeeeEEeeCCceEEEEecCCcEEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEE--CC
Confidence 999987 7766677777799999999998777764 7999999987 4432 222334444444444 45
Q ss_pred -CCeEEEEecCCCceEEEEEcCCc-------ceEeeccccc---------ceeEEEECCCCCEEEEEeCCCCEEEEEECC
Q 022387 227 -GSLVLVCPGLQKGQVRVEHYASK-------RTKFIMAHDS---------RIACFALTQDGQLLATSSTKGTLVRIFNTL 289 (298)
Q Consensus 227 -d~~~la~sGs~dg~v~i~~~~~~-------~~~~~~~H~~---------~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~ 289 (298)
++.++++ |+.||.|++|++... ....+..|.. .|++++|+|+|++||+++.||. |+|||+.
T Consensus 204 ~~~~~l~~-~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~-i~vwd~~ 281 (342)
T 1yfq_A 204 KEQEGYAC-SSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGI-ISCWNLQ 281 (342)
T ss_dssp GGGCEEEE-EETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSC-EEEEETT
T ss_pred CCCCEEEE-EecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCce-EEEEcCc
Confidence 5577774 889999999998754 3457788865 9999999999999999999999 9999999
Q ss_pred CCcEEEec
Q 022387 290 DGTLLQEG 297 (298)
Q Consensus 290 tg~~l~~~ 297 (298)
++++++++
T Consensus 282 ~~~~~~~~ 289 (342)
T 1yfq_A 282 TRKKIKNF 289 (342)
T ss_dssp TTEEEEEC
T ss_pred cHhHhhhh
Confidence 99998775
No 57
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.94 E-value=3.8e-25 Score=196.83 Aligned_cols=199 Identities=10% Similarity=0.027 Sum_probs=149.1
Q ss_pred CCCCCCeEEEEEcC--CCCEEEEEcCCe-EEEEEcCCCceEEEEeee-cCCceEEEEEecC--CCEEEEEeCCCCCCCCC
Q 022387 82 SSPPPTLLHISFNQ--DHGCFAAGTDHG-FRIYNCDPFREIFRRDFE-RGGGIGVVEMLFR--CNILALVGGGPDPQYPL 155 (298)
Q Consensus 82 ~~~~~~V~~v~fs~--dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d 155 (298)
..|...|.+++|++ +|++||+|+.|+ ++|||+.+........+. |...+..+.+.++ +..+++++ .|
T Consensus 54 ~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs-------~D 126 (316)
T 3bg1_A 54 RGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGS-------SD 126 (316)
T ss_dssp ECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEEC-------SS
T ss_pred cCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEc-------CC
Confidence 46788999999986 489999999755 899999876422222221 5677888888876 55666666 68
Q ss_pred CeEEEEeCCCCcEE---EEee-cCCceEEEEEeCC-------------------eEEEEE-CCeEEEEEcCCC---eEEE
Q 022387 156 NKVMIWDDHQSRCI---GELS-FRSEVRSVKLRRD-------------------RIIVVL-EQKIFVYNFADL---KLLH 208 (298)
Q Consensus 156 ~~v~iWD~~~~~~~---~~~~-~~~~v~~v~~~~~-------------------~l~v~~-~~~I~iwd~~~~---~~i~ 208 (298)
++|++||++.+... ..+. +...|.++.|+++ .++++. +++|++||++.. +++.
T Consensus 127 ~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~ 206 (316)
T 3bg1_A 127 GAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQ 206 (316)
T ss_dssp SCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEE
T ss_pred CCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceee
Confidence 99999999876322 1222 2346888888775 344443 589999999754 5667
Q ss_pred EEeccCCCcceEEEEeCC--CCeEEEEecCCCceEEEEEcCCc-----ceEeecccccceeEEEECCCCCEEEEEeCCCC
Q 022387 209 QIETIANPKGLCAVSQGV--GSLVLVCPGLQKGQVRVEHYASK-----RTKFIMAHDSRIACFALTQDGQLLATSSTKGT 281 (298)
Q Consensus 209 ~~~~~~~~~~~~~~s~~~--d~~~la~sGs~dg~v~i~~~~~~-----~~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt 281 (298)
++..|...+..++++++. +..+|| +|+.||.|++|+.... ....+..|...|++++|+|+|++||+++.|++
T Consensus 207 ~l~~h~~~V~~v~~sp~~~~~~~~la-s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~ 285 (316)
T 3bg1_A 207 KLEAHSDWVRDVAWAPSIGLPTSTIA-SCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNK 285 (316)
T ss_dssp CCBCCSSCEEEEECCCCSSCSCCEEE-EEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSC
T ss_pred ecccCCCceEEEEecCCCCCCCceEE-EEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCe
Confidence 778888777777776653 236677 5999999999998752 12356789999999999999999999999999
Q ss_pred EEEEEECC
Q 022387 282 LVRIFNTL 289 (298)
Q Consensus 282 ~IrIWd~~ 289 (298)
|+||+..
T Consensus 286 -v~lw~~~ 292 (316)
T 3bg1_A 286 -VTLWKES 292 (316)
T ss_dssp -EEEEEEC
T ss_pred -EEEEEEC
Confidence 9999986
No 58
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.94 E-value=2.9e-24 Score=210.56 Aligned_cols=203 Identities=13% Similarity=0.170 Sum_probs=163.3
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEE
Q 022387 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i 160 (298)
..|...|++++|+|||++|++|+.|+ |+|||+.+......... |...+..+.+++++..+++++ .|++|+|
T Consensus 427 ~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~s-------~D~~i~i 498 (694)
T 3dm0_A 427 TGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVG-HTKDVLSVAFSLDNRQIVSAS-------RDRTIKL 498 (694)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEECTTSSCEEEEE-------TTSCEEE
T ss_pred cCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeC-CCCCEEEEEEeCCCCEEEEEe-------CCCEEEE
Confidence 56788999999999999999999865 88999998876655543 678899999999999888888 7899999
Q ss_pred EeCCCCcEEEEe----ecCCceEEEEEeCCe----EEEEE-CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEE
Q 022387 161 WDDHQSRCIGEL----SFRSEVRSVKLRRDR----IIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVL 231 (298)
Q Consensus 161 WD~~~~~~~~~~----~~~~~v~~v~~~~~~----l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~l 231 (298)
||.......... .+...|.++.|+++. ++++. +++|++||+++.+++.++..|...+..++++++ +.+|
T Consensus 499 wd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spd--g~~l 576 (694)
T 3dm0_A 499 WNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPD--GSLC 576 (694)
T ss_dssp ECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTT--SSEE
T ss_pred EECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCC--CCEE
Confidence 998765443322 133469999998753 44444 589999999999999999988887777776654 5788
Q ss_pred EEecCCCceEEEEEcCCcceEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 232 VCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 232 a~sGs~dg~v~i~~~~~~~~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
+ +|+.||.|++||+..........+...|++++|+|++.+|++++ |+. |+|||++++++++++
T Consensus 577 ~-sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~~~-i~iwd~~~~~~~~~~ 639 (694)
T 3dm0_A 577 A-SGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAAT-EHG-IKIWDLESKSIVEDL 639 (694)
T ss_dssp E-EEETTSBCEEEETTTTEEEECCBCSSCEEEEEECSSSSEEEEEE-TTE-EEEEETTTTEEEEEE
T ss_pred E-EEeCCCeEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEEc-CCC-EEEEECCCCCChhhh
Confidence 8 59999999999998766543334567899999999999998876 666 999999999887654
No 59
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.93 E-value=8.9e-25 Score=195.00 Aligned_cols=202 Identities=11% Similarity=0.106 Sum_probs=152.6
Q ss_pred cCCCCCCeEEEE------EcCCCCEEEEEcCCe-EEEEEcCCCc-eEEEEeeecCC----ceEEEE----EecCCCEEEE
Q 022387 81 SSSPPPTLLHIS------FNQDHGCFAAGTDHG-FRIYNCDPFR-EIFRRDFERGG----GIGVVE----MLFRCNILAL 144 (298)
Q Consensus 81 ~~~~~~~V~~v~------fs~dg~~lasgs~~g-i~vw~~~~~~-~~~~~~~~~~~----~~~~~~----~~~~~~~~~~ 144 (298)
...|...|.+++ |+|++++|++|+.++ +++|++...+ ....... +.+ .+..+. +.+++..+++
T Consensus 107 ~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~l~~ 185 (357)
T 3i2n_A 107 VKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEP-VQGENKRDCWTVAFGNAYNQEERVVCA 185 (357)
T ss_dssp ECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECC-CTTSCCCCEEEEEEECCCC-CCCEEEE
T ss_pred EEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccc-cCCCCCCceEEEEEEeccCCCCCEEEE
Confidence 356888999995 578999999999865 8899998875 3333332 122 455555 3456777777
Q ss_pred EeCCCCCCCCCCeEEEEeCCCCcEEEEeecCCceEEEEEeC-----CeEEEEE-CCeEEEEEcCCCeEEEEEe-----cc
Q 022387 145 VGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRR-----DRIIVVL-EQKIFVYNFADLKLLHQIE-----TI 213 (298)
Q Consensus 145 ~~~~~~~~~~d~~v~iWD~~~~~~~~~~~~~~~v~~v~~~~-----~~l~v~~-~~~I~iwd~~~~~~i~~~~-----~~ 213 (298)
++ .|+.|++||+++++......+...|.++.|++ +.++++. ++.|++||+++.+.+..+. .|
T Consensus 186 ~~-------~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 258 (357)
T 3i2n_A 186 GY-------DNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAH 258 (357)
T ss_dssp EE-------TTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECC
T ss_pred Ec-------cCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCC
Confidence 76 67999999999999887777888999999986 4455555 5899999998766655554 67
Q ss_pred CCCcceEEEEeCCCCe-EEEEecCCCceEEEEEcCCc--------------------ceEeecccccceeEEEECCCCCE
Q 022387 214 ANPKGLCAVSQGVGSL-VLVCPGLQKGQVRVEHYASK--------------------RTKFIMAHDSRIACFALTQDGQL 272 (298)
Q Consensus 214 ~~~~~~~~~s~~~d~~-~la~sGs~dg~v~i~~~~~~--------------------~~~~~~~H~~~V~~l~fspdg~~ 272 (298)
...+..++++++ +. +++ +|+.||.|++|++... .+..+.+|...|++++|+|+|++
T Consensus 259 ~~~v~~~~~~~~--~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 335 (357)
T 3i2n_A 259 KSTVWQVRHLPQ--NRELFL-TAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRG 335 (357)
T ss_dssp SSCEEEEEEETT--EEEEEE-EEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTT
T ss_pred cCCEEEEEECCC--CCcEEE-EEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCe
Confidence 666666666654 46 555 5999999999998642 34578899999999999999999
Q ss_pred EE-EEeCCCCEEEEEECCCCcEE
Q 022387 273 LA-TSSTKGTLVRIFNTLDGTLL 294 (298)
Q Consensus 273 lA-t~S~Dgt~IrIWd~~tg~~l 294 (298)
|| |++.||. |+|||+.+.+++
T Consensus 336 l~~s~~~d~~-i~iw~~~~~~~i 357 (357)
T 3i2n_A 336 LCVCSSFDQT-VRVLIVTKLNKI 357 (357)
T ss_dssp EEEEEETTSE-EEEEEECC----
T ss_pred EEEEecCCCc-EEEEECCCcccC
Confidence 98 8999999 999999987654
No 60
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.93 E-value=1.8e-24 Score=196.46 Aligned_cols=204 Identities=15% Similarity=0.162 Sum_probs=161.3
Q ss_pred CCCCCCeEEEEEcCC----C---CEEEEEcCCe-EEEEEcCCCce-----EEEEeeec-----CCceEEEEEe----cCC
Q 022387 82 SSPPPTLLHISFNQD----H---GCFAAGTDHG-FRIYNCDPFRE-----IFRRDFER-----GGGIGVVEML----FRC 139 (298)
Q Consensus 82 ~~~~~~V~~v~fs~d----g---~~lasgs~~g-i~vw~~~~~~~-----~~~~~~~~-----~~~~~~~~~~----~~~ 139 (298)
..|...|++++|+|+ | ++|++|+.++ +++|++.+.+. ...... | ...+..+.+. +++
T Consensus 59 ~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~ 137 (397)
T 1sq9_A 59 FVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDL-LDSDMKKHSFWALKWGASNDRLL 137 (397)
T ss_dssp ECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECC-SCTTGGGSCEEEEEEECCC----
T ss_pred ecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecc-cccccCCCcEEEEEEeeccCCCC
Confidence 367779999999999 9 9999998755 88999987664 444433 4 3778888998 888
Q ss_pred CE-EEEEeCCCCCCCCCCeEEEEeCCC------CcEEE-----Eee--------cCCceEEEEEeCCeEEE-EE-CCeEE
Q 022387 140 NI-LALVGGGPDPQYPLNKVMIWDDHQ------SRCIG-----ELS--------FRSEVRSVKLRRDRIIV-VL-EQKIF 197 (298)
Q Consensus 140 ~~-~~~~~~~~~~~~~d~~v~iWD~~~------~~~~~-----~~~--------~~~~v~~v~~~~~~l~v-~~-~~~I~ 197 (298)
.. +++++ .|+.|++||+++ ++.+. .+. +...|.++.|+++.+++ +. ++.|+
T Consensus 138 ~~~l~~~~-------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~ 210 (397)
T 1sq9_A 138 SHRLVATD-------VKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQ 210 (397)
T ss_dssp CEEEEEEE-------TTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEE
T ss_pred ceEEEEEe-------CCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEE
Confidence 88 77777 679999999988 55544 553 34579999999875333 33 48999
Q ss_pred EEEcCCCeEEEEEec---c---CCCcceEEEEeCCCCeEEEEecCCC---ceEEEEEcCCcc-eEeecc-----------
Q 022387 198 VYNFADLKLLHQIET---I---ANPKGLCAVSQGVGSLVLVCPGLQK---GQVRVEHYASKR-TKFIMA----------- 256 (298)
Q Consensus 198 iwd~~~~~~i~~~~~---~---~~~~~~~~~s~~~d~~~la~sGs~d---g~v~i~~~~~~~-~~~~~~----------- 256 (298)
+||+++.+.+..+.. | ...+..++++++ +.+|++ |+.| |.|++|++.... +..+.+
T Consensus 211 i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~--~~~l~~-~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 287 (397)
T 1sq9_A 211 ISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQ--GSLLAI-AHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGE 287 (397)
T ss_dssp EEETTTTEEEEEEECCC---CCCCCEEEEEECSS--TTEEEE-EEEETTEEEEEEEETTTCCEEEEECBC--------CC
T ss_pred EEECCCCceeEEEeccccccccCCccceEEECCC--CCEEEE-EecCCCCceEEEEECCCCcccceeccCcccccccccc
Confidence 999999999999998 7 666666666554 577774 8888 999999987654 457887
Q ss_pred --cccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 257 --HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 257 --H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
|...|++++|+|++++||+++.||+ |+|||+++++++.++
T Consensus 288 ~~~~~~v~~~~~~~~~~~l~~~~~dg~-i~iwd~~~~~~~~~~ 329 (397)
T 1sq9_A 288 FAHSSWVMSLSFNDSGETLCSAGWDGK-LRFWDVKTKERITTL 329 (397)
T ss_dssp BSBSSCEEEEEECSSSSEEEEEETTSE-EEEEETTTTEEEEEE
T ss_pred cccCCcEEEEEECCCCCEEEEEeCCCe-EEEEEcCCCceeEEE
Confidence 9999999999999999999999999 999999999988765
No 61
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.5e-24 Score=198.02 Aligned_cols=204 Identities=14% Similarity=0.175 Sum_probs=158.9
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCC----CceEEEEeeecCCceEEEEEecC-CCEEEEEeCCCCCCCCCC
Q 022387 83 SPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDP----FREIFRRDFERGGGIGVVEMLFR-CNILALVGGGPDPQYPLN 156 (298)
Q Consensus 83 ~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~ 156 (298)
.|...|++++|+|++++||+|+.++ ++||++.. .+....... |...+..+.+.++ +..+++++ .|+
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~-------~dg 136 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSN-HSSSVKTVKFNAKQDNVLASGG-------NNG 136 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCC-SSSCCCEEEECSSSTTBEEEEC-------SSS
T ss_pred ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccC-CccceEEEEEcCCCCCEEEEEc-------CCC
Confidence 4567899999999999999998865 88999987 223333332 6778888999887 77777766 679
Q ss_pred eEEEEeCCCCc------EEEEe----ecCCceEEEEEeCC---eEEEEE-CCeEEEEEcCCCeEEEEEecc------CCC
Q 022387 157 KVMIWDDHQSR------CIGEL----SFRSEVRSVKLRRD---RIIVVL-EQKIFVYNFADLKLLHQIETI------ANP 216 (298)
Q Consensus 157 ~v~iWD~~~~~------~~~~~----~~~~~v~~v~~~~~---~l~v~~-~~~I~iwd~~~~~~i~~~~~~------~~~ 216 (298)
+|++||+.+++ ....+ .+...|.++.|+++ .++++. ++.|++||+++.+.+.++..+ ...
T Consensus 137 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 216 (416)
T 2pm9_A 137 EIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQ 216 (416)
T ss_dssp CEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCC
T ss_pred eEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCc
Confidence 99999999876 33222 34468999999875 344433 589999999999999888876 445
Q ss_pred cceEEEEeCCCCeEEEEecCCCc---eEEEEEcCCc--ceEeec-ccccceeEEEECC-CCCEEEEEeCCCCEEEEEECC
Q 022387 217 KGLCAVSQGVGSLVLVCPGLQKG---QVRVEHYASK--RTKFIM-AHDSRIACFALTQ-DGQLLATSSTKGTLVRIFNTL 289 (298)
Q Consensus 217 ~~~~~~s~~~d~~~la~sGs~dg---~v~i~~~~~~--~~~~~~-~H~~~V~~l~fsp-dg~~lAt~S~Dgt~IrIWd~~ 289 (298)
+..+++++++. .+++ +|+.|| .|++|++... ....+. +|...|++++|+| ++++||+++.||+ |+|||++
T Consensus 217 v~~~~~~~~~~-~~l~-~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~-v~~wd~~ 293 (416)
T 2pm9_A 217 LSVVEWHPKNS-TRVA-TATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNT-VLLWNPE 293 (416)
T ss_dssp EEEEEECSSCT-TEEE-EEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSE-EEEECSS
T ss_pred eEEEEECCCCC-CEEE-EEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCC-EEEeeCC
Confidence 55555555432 3555 488888 9999999864 455777 8999999999999 9999999999999 9999999
Q ss_pred CCcEEEec
Q 022387 290 DGTLLQEG 297 (298)
Q Consensus 290 tg~~l~~~ 297 (298)
++++++++
T Consensus 294 ~~~~~~~~ 301 (416)
T 2pm9_A 294 SAEQLSQF 301 (416)
T ss_dssp SCCEEEEE
T ss_pred CCccceee
Confidence 99988765
No 62
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.93 E-value=4e-24 Score=194.76 Aligned_cols=200 Identities=16% Similarity=0.257 Sum_probs=164.3
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEe
Q 022387 84 PPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWD 162 (298)
Q Consensus 84 ~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD 162 (298)
|...|++++|+|+|++|++|+.++ ++||+ ...+....... |...+..+.+.+++..+++++ .|+.|++||
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-------~d~~i~iwd 177 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNF-HRAPIVSVKWNKDGTHIISMD-------VENVTILWN 177 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECC-CCSCEEEEEECTTSSEEEEEE-------TTCCEEEEE
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccC-CCccEEEEEECCCCCEEEEEe-------cCCeEEEEE
Confidence 567999999999999999999866 88999 44444444433 677889999999998888887 679999999
Q ss_pred CCCCcEEEEeecCC-c---------------eEEEEEeCCeEEEEE--CCeEEEEEcCCCeEEEEEeccCCCcceEEEEe
Q 022387 163 DHQSRCIGELSFRS-E---------------VRSVKLRRDRIIVVL--EQKIFVYNFADLKLLHQIETIANPKGLCAVSQ 224 (298)
Q Consensus 163 ~~~~~~~~~~~~~~-~---------------v~~v~~~~~~l~v~~--~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~ 224 (298)
+.+++.+..+..+. . +.++.|+++..+++. ++.|++||+.+.+.+..+..|...+..+++++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~ 257 (425)
T 1r5m_A 178 VISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFND 257 (425)
T ss_dssp TTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEET
T ss_pred CCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECC
Confidence 99999888777654 2 788888876555544 48999999999998888888887777777776
Q ss_pred CCCCeEEEEecCCCceEEEEEcCCcc-eEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 225 GVGSLVLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 225 ~~d~~~la~sGs~dg~v~i~~~~~~~-~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
++ .+|++ |+.||.|++|+..... ...+..|...|.+++|+|++ +|++++.|+. |+|||+++++++.++
T Consensus 258 ~~--~~l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~-i~i~d~~~~~~~~~~ 326 (425)
T 1r5m_A 258 TN--KLLLS-ASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGS-VRLWSLKQNTLLALS 326 (425)
T ss_dssp TT--TEEEE-EETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSE-EEEEETTTTEEEEEE
T ss_pred CC--CEEEE-EcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCc-EEEEECCCCcEeEec
Confidence 54 67774 8999999999988754 55788899999999999999 9999999999 999999999887654
No 63
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.93 E-value=1.8e-23 Score=184.87 Aligned_cols=194 Identities=12% Similarity=0.120 Sum_probs=161.8
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEE
Q 022387 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i 160 (298)
..|...|.+++|+|++++|++|+.++ +++|++.+.+....... |...+..+.+.+++..+++++ .|+.|++
T Consensus 138 ~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~-------~dg~i~~ 209 (337)
T 1gxr_A 138 TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG-HTDGASCIDISNDGTKLWTGG-------LDNTVRS 209 (337)
T ss_dssp ECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEE-------TTSEEEE
T ss_pred ccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeec-ccCceEEEEECCCCCEEEEEe-------cCCcEEE
Confidence 45677899999999999999998855 88999998876655543 577888899998888888887 6799999
Q ss_pred EeCCCCcEEEEeecCCceEEEEEeCC--eEEEEE-CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEecCC
Q 022387 161 WDDHQSRCIGELSFRSEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQ 237 (298)
Q Consensus 161 WD~~~~~~~~~~~~~~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs~ 237 (298)
||+++++.+..+.+...+.++.|+++ .++++. ++.|++||+.+.+.. .+..|...+..+++++ ++.++++ ++.
T Consensus 210 ~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~v~~~~~~~--~~~~l~~-~~~ 285 (337)
T 1gxr_A 210 WDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLSLKFAY--CGKWFVS-TGK 285 (337)
T ss_dssp EETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEEEEEECT--TSSEEEE-EET
T ss_pred EECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE-EEcCCccceeEEEECC--CCCEEEE-ecC
Confidence 99999999988888889999999875 455554 589999999887754 5566666655555554 5577874 889
Q ss_pred CceEEEEEcCCcceEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEEC
Q 022387 238 KGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNT 288 (298)
Q Consensus 238 dg~v~i~~~~~~~~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~ 288 (298)
||.|++|+...........|...|++++|+|++++|++++.||. |+|||+
T Consensus 286 dg~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~-i~iw~~ 335 (337)
T 1gxr_A 286 DNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKK-ATVYEV 335 (337)
T ss_dssp TSEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSC-EEEEEE
T ss_pred CCcEEEEECCCCeEEEEecCCCcEEEEEECCCCCEEEEecCCCe-EEEEEE
Confidence 99999999988776666679999999999999999999999999 999996
No 64
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.93 E-value=1.3e-23 Score=208.04 Aligned_cols=206 Identities=11% Similarity=0.085 Sum_probs=172.0
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEE
Q 022387 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i 160 (298)
..|...|++++|+|||++||+|+.++ ++||++.+.+....... |.+.+..+.+++++..+++++ .|++|++
T Consensus 52 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~-------~dg~i~v 123 (814)
T 3mkq_A 52 QVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEA-HPDYIRSIAVHPTKPYVLSGS-------DDLTVKL 123 (814)
T ss_dssp ECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECSSSSEEEEEE-------TTSEEEE
T ss_pred ecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEec-CCCCEEEEEEeCCCCEEEEEc-------CCCEEEE
Confidence 35677999999999999999999866 88999999887666654 678899999999999888877 6899999
Q ss_pred EeCCCC-cEEEEeec-CCceEEEEEeC-C--eEEEEE-CCeEEEEEcCCCeEEEEEeccC-CCcceEEEEeCCCCeEEEE
Q 022387 161 WDDHQS-RCIGELSF-RSEVRSVKLRR-D--RIIVVL-EQKIFVYNFADLKLLHQIETIA-NPKGLCAVSQGVGSLVLVC 233 (298)
Q Consensus 161 WD~~~~-~~~~~~~~-~~~v~~v~~~~-~--~l~v~~-~~~I~iwd~~~~~~i~~~~~~~-~~~~~~~~s~~~d~~~la~ 233 (298)
||+.++ .....+.. ...|.++.|++ + .++++. ++.|++||+.+.+....+..+. ..+..+++++.+++.++++
T Consensus 124 w~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~ 203 (814)
T 3mkq_A 124 WNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMIT 203 (814)
T ss_dssp EEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEE
T ss_pred EECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEE
Confidence 999987 55555554 45899999987 3 344444 5899999998888777777654 6677788888667788884
Q ss_pred ecCCCceEEEEEcCCcc-eEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 234 PGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 234 sGs~dg~v~i~~~~~~~-~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
|+.||.|++|+..... +..+.+|...|++++|+|+|++|++++.||+ |+|||+.+++++.++
T Consensus 204 -~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-v~vwd~~~~~~~~~~ 266 (814)
T 3mkq_A 204 -ASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGT-LKIWNSSTYKVEKTL 266 (814)
T ss_dssp -ECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSC-EEEEETTTCSEEEEE
T ss_pred -EeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCe-EEEEECCCCcEEEEe
Confidence 8999999999988765 4578899999999999999999999999999 999999999887764
No 65
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.4e-23 Score=188.46 Aligned_cols=203 Identities=11% Similarity=0.020 Sum_probs=154.4
Q ss_pred CCCCCCeEEEEEcCC--CCEEEEEcCCe-EEEEEcCCCceEEEEeee-cCCceEEEEEecC--CCEEEEEeCCCCCCCCC
Q 022387 82 SSPPPTLLHISFNQD--HGCFAAGTDHG-FRIYNCDPFREIFRRDFE-RGGGIGVVEMLFR--CNILALVGGGPDPQYPL 155 (298)
Q Consensus 82 ~~~~~~V~~v~fs~d--g~~lasgs~~g-i~vw~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d 155 (298)
..|...|++++|+++ +++|++|+.++ ++||++.+.+......+. |...+..+.+.++ +..+++++ .|
T Consensus 52 ~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-------~d 124 (379)
T 3jrp_A 52 TGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVAS-------SD 124 (379)
T ss_dssp CCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE-------TT
T ss_pred cCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEec-------CC
Confidence 457779999999987 99999999866 889999988633233221 5778888888888 77888877 68
Q ss_pred CeEEEEeCCCCcE--EEEe-ecCCceEEEEEeC---------------CeEEEEE-CCeEEEEEcCCCe----EEEEEec
Q 022387 156 NKVMIWDDHQSRC--IGEL-SFRSEVRSVKLRR---------------DRIIVVL-EQKIFVYNFADLK----LLHQIET 212 (298)
Q Consensus 156 ~~v~iWD~~~~~~--~~~~-~~~~~v~~v~~~~---------------~~l~v~~-~~~I~iwd~~~~~----~i~~~~~ 212 (298)
+.|++||++++.. ...+ .+...|.++.|++ ..++++. ++.|++||+++.+ ++..+..
T Consensus 125 ~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 204 (379)
T 3jrp_A 125 GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG 204 (379)
T ss_dssp SEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECC
T ss_pred CcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEec
Confidence 9999999988733 2233 3456899999987 2444444 5899999996543 5566677
Q ss_pred cCCCcceEEEEeCCC-CeEEEEecCCCceEEEEEcCCcc----eE--eecccccceeEEEECCCCCEEEEEeCCCCEEEE
Q 022387 213 IANPKGLCAVSQGVG-SLVLVCPGLQKGQVRVEHYASKR----TK--FIMAHDSRIACFALTQDGQLLATSSTKGTLVRI 285 (298)
Q Consensus 213 ~~~~~~~~~~s~~~d-~~~la~sGs~dg~v~i~~~~~~~----~~--~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrI 285 (298)
|..++..++++++.. +.+|+ +|+.||.|++|++.... .. ....|...|++++|+|+|++||+++.||. |+|
T Consensus 205 h~~~v~~~~~sp~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~-i~i 282 (379)
T 3jrp_A 205 HSDWVRDVAWSPTVLLRSYLA-SVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNK-VTL 282 (379)
T ss_dssp CSSCEEEEEECCCCSSSEEEE-EEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSS-EEE
T ss_pred ccCcEeEEEECCCCCCCCeEE-EEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCc-EEE
Confidence 777766666665411 47777 48999999999998752 22 33458899999999999999999999999 999
Q ss_pred EECCCCcE
Q 022387 286 FNTLDGTL 293 (298)
Q Consensus 286 Wd~~tg~~ 293 (298)
||+..+..
T Consensus 283 w~~~~~~~ 290 (379)
T 3jrp_A 283 WKENLEGK 290 (379)
T ss_dssp EEEEETTE
T ss_pred EeCCCCCc
Confidence 99985543
No 66
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.93 E-value=2.1e-23 Score=191.17 Aligned_cols=201 Identities=18% Similarity=0.198 Sum_probs=155.6
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCc-eEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEE
Q 022387 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFR-EIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~ 159 (298)
..|...|.+++| ++++|++|+.++ +++|++.... ....... |.+.+..+.+.+++..+++++ .|+.|+
T Consensus 173 ~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~-------~d~~v~ 242 (401)
T 4aez_A 173 AGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQG-HSSEVCGLAWRSDGLQLASGG-------NDNVVQ 242 (401)
T ss_dssp CCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEEC-CSSCEEEEEECTTSSEEEEEE-------TTSCEE
T ss_pred cCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcC-CCCCeeEEEEcCCCCEEEEEe-------CCCeEE
Confidence 467889999999 567999999865 7899998543 3333332 678899999999888888887 689999
Q ss_pred EEeCCCCcEEEEee-cCCceEEEEEeCC--eEEE-EE---CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEE
Q 022387 160 IWDDHQSRCIGELS-FRSEVRSVKLRRD--RIIV-VL---EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLV 232 (298)
Q Consensus 160 iWD~~~~~~~~~~~-~~~~v~~v~~~~~--~l~v-~~---~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la 232 (298)
+||+++++.+..+. +...|.++.|+++ .+++ +. ++.|++||+.+++++..+..+ ..+..++++ +++.+++
T Consensus 243 iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~-~~v~~~~~s--~~~~~l~ 319 (401)
T 4aez_A 243 IWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAG-SQVTSLIWS--PHSKEIM 319 (401)
T ss_dssp EEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECS-SCEEEEEEC--SSSSEEE
T ss_pred EccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCC-CcEEEEEEC--CCCCeEE
Confidence 99999998887775 4468999999873 3444 33 689999999999998888643 344444554 4556666
Q ss_pred Ee-cCCCceEEEEEcCCcce---EeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEe
Q 022387 233 CP-GLQKGQVRVEHYASKRT---KFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQE 296 (298)
Q Consensus 233 ~s-Gs~dg~v~i~~~~~~~~---~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~ 296 (298)
++ |+.||.|++|++..... ..+.+|...|++++|+|+|++||+++.||+ |+|||+.+++++.+
T Consensus 320 ~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~-i~iw~~~~~~~~~~ 386 (401)
T 4aez_A 320 STHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDEN-LKFWRVYDGDHVKR 386 (401)
T ss_dssp EEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSE-EEEEECCC------
T ss_pred EEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCc-EEEEECCCCccccc
Confidence 43 77899999999987543 357799999999999999999999999999 99999999987754
No 67
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.93 E-value=3.2e-23 Score=189.75 Aligned_cols=200 Identities=14% Similarity=0.189 Sum_probs=158.4
Q ss_pred cCCCCCCeEEEEEcC-CCCEEEEEcCCe-EEEEEcCCC-------ceEEEEeeecCCceEEEEEecCC-CEEEEEeCCCC
Q 022387 81 SSSPPPTLLHISFNQ-DHGCFAAGTDHG-FRIYNCDPF-------REIFRRDFERGGGIGVVEMLFRC-NILALVGGGPD 150 (298)
Q Consensus 81 ~~~~~~~V~~v~fs~-dg~~lasgs~~g-i~vw~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 150 (298)
...|...|++++|+| ++++||+|+.++ |+||++.+. +.+..... |...+..+.+.+++ +.+++++
T Consensus 77 ~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~~l~s~~---- 151 (402)
T 2aq5_A 77 VCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEG-HTKRVGIVAWHPTAQNVLLSAG---- 151 (402)
T ss_dssp BCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEEC-CSSCEEEEEECSSBTTEEEEEE----
T ss_pred EecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecC-CCCeEEEEEECcCCCCEEEEEc----
Confidence 356788999999999 999999999866 889999876 33333333 67889999998887 5777777
Q ss_pred CCCCCCeEEEEeCCCCcEEEEe--e-cCCceEEEEEeCC--eEEEEE-CCeEEEEEcCCCeEEEEE-eccCCC-cceEEE
Q 022387 151 PQYPLNKVMIWDDHQSRCIGEL--S-FRSEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQI-ETIANP-KGLCAV 222 (298)
Q Consensus 151 ~~~~d~~v~iWD~~~~~~~~~~--~-~~~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~~~i~~~-~~~~~~-~~~~~~ 222 (298)
.|++|++||+++++.+..+ . +...|.++.|+++ .++++. ++.|++||+++++.+.++ ..|... +..+.+
T Consensus 152 ---~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 228 (402)
T 2aq5_A 152 ---CDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVF 228 (402)
T ss_dssp ---TTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEE
T ss_pred ---CCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEE
Confidence 6799999999999998888 3 4568999999864 455554 589999999999999988 566544 445555
Q ss_pred EeCCCCeEEEEec---CCCceEEEEEcCCcc--eEee-cccccceeEEEECCCCCEEEE-EeCCCCEEEEEECCCCc
Q 022387 223 SQGVGSLVLVCPG---LQKGQVRVEHYASKR--TKFI-MAHDSRIACFALTQDGQLLAT-SSTKGTLVRIFNTLDGT 292 (298)
Q Consensus 223 s~~~d~~~la~sG---s~dg~v~i~~~~~~~--~~~~-~~H~~~V~~l~fspdg~~lAt-~S~Dgt~IrIWd~~tg~ 292 (298)
+ +++.++++ | +.||.|++||..... .... ..|...|.+++|+|+|++|++ |+.||+ |+|||+.+++
T Consensus 229 ~--~~~~~l~~-g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~-i~i~d~~~~~ 301 (402)
T 2aq5_A 229 V--SEGKILTT-GFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSS-IRYFEITSEA 301 (402)
T ss_dssp C--STTEEEEE-EECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSC-EEEEEECSST
T ss_pred c--CCCcEEEE-eccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCe-EEEEEecCCC
Confidence 5 45688885 7 799999999997643 2232 357788999999999999975 557999 9999999987
No 68
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.93 E-value=3.2e-24 Score=197.75 Aligned_cols=201 Identities=12% Similarity=0.177 Sum_probs=147.8
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCce-----------EEEEeeecC------------CceEEEEEecCC
Q 022387 84 PPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFRE-----------IFRRDFERG------------GGIGVVEMLFRC 139 (298)
Q Consensus 84 ~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~-----------~~~~~~~~~------------~~~~~~~~~~~~ 139 (298)
+...|++++|+|+|++||+|+.+| |+||++.+.+. ...... |. +.+..+.+.++.
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~-h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQS-HEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEEC-CCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEeccccc-ccccccccccccccCceEEEEEcCCC
Confidence 456899999999999999999866 88999987652 222222 44 568888998877
Q ss_pred --CEEEEEeCCCCCCCCCCeEEEEeCCCCcEE---------------------------------------EEe--ecCC
Q 022387 140 --NILALVGGGPDPQYPLNKVMIWDDHQSRCI---------------------------------------GEL--SFRS 176 (298)
Q Consensus 140 --~~~~~~~~~~~~~~~d~~v~iWD~~~~~~~---------------------------------------~~~--~~~~ 176 (298)
..+++++ .|++|++||+.+++.. ..+ .+..
T Consensus 106 ~~~~l~s~s-------~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 178 (447)
T 3dw8_B 106 NAAQFLLST-------NDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTY 178 (447)
T ss_dssp SSSEEEEEE-------CSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSS
T ss_pred CcceEEEeC-------CCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCc
Confidence 6677776 6899999998764432 111 2445
Q ss_pred ceEEEEEeCC--eEEEEECCeEEEEEcC-CCeEEEEE-------eccCCCcceEEEEeCCCC-eEEEEecCCCceEEEEE
Q 022387 177 EVRSVKLRRD--RIIVVLEQKIFVYNFA-DLKLLHQI-------ETIANPKGLCAVSQGVGS-LVLVCPGLQKGQVRVEH 245 (298)
Q Consensus 177 ~v~~v~~~~~--~l~v~~~~~I~iwd~~-~~~~i~~~-------~~~~~~~~~~~~s~~~d~-~~la~sGs~dg~v~i~~ 245 (298)
.|.++.|+++ .++++.++.|++||+. ..+.+..+ ..|...+..++++ +++ .+|+ +|+.||.|++||
T Consensus 179 ~v~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--p~~~~~l~-s~~~dg~i~iwd 255 (447)
T 3dw8_B 179 HINSISINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFH--PNSCNTFV-YSSSKGTIRLCD 255 (447)
T ss_dssp CCCEEEECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEEC--SSCTTEEE-EEETTSCEEEEE
T ss_pred ceEEEEEcCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEEC--CCCCcEEE-EEeCCCeEEEEE
Confidence 8999999874 5556656899999998 44444432 3455555555554 454 5666 489999999999
Q ss_pred cCCcc-----eEeeccccc------------ceeEEEECCCCCEEEEEeCCCCEEEEEECCC-CcEEEec
Q 022387 246 YASKR-----TKFIMAHDS------------RIACFALTQDGQLLATSSTKGTLVRIFNTLD-GTLLQEG 297 (298)
Q Consensus 246 ~~~~~-----~~~~~~H~~------------~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~t-g~~l~~~ 297 (298)
+.... ...+..|.. .|++|+|+|+|++||+++. ++ |+|||+++ +++++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~-v~iwd~~~~~~~~~~~ 323 (447)
T 3dw8_B 256 MRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LS-VKVWDLNMENRPVETY 323 (447)
T ss_dssp TTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SE-EEEEETTCCSSCSCCE
T ss_pred CcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-Ce-EEEEeCCCCcccccee
Confidence 98765 367888876 9999999999999999998 88 99999997 7766543
No 69
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.93 E-value=4.1e-24 Score=190.99 Aligned_cols=193 Identities=7% Similarity=0.036 Sum_probs=130.3
Q ss_pred CCCCCCeEEEEEcCC----CCEEEEEcC---------------------CeEEEEEcCC-CceEEEEeeecCCceEEEEE
Q 022387 82 SSPPPTLLHISFNQD----HGCFAAGTD---------------------HGFRIYNCDP-FREIFRRDFERGGGIGVVEM 135 (298)
Q Consensus 82 ~~~~~~V~~v~fs~d----g~~lasgs~---------------------~gi~vw~~~~-~~~~~~~~~~~~~~~~~~~~ 135 (298)
..+...|++++|+|| +.++++|+. +.|++|++.+ ++.+..... |...+.++.+
T Consensus 108 ~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~-~~~~v~~l~f 186 (356)
T 2w18_A 108 NLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFL-MPPEETILTF 186 (356)
T ss_dssp SSSEEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEE-CCCSSCEEEE
T ss_pred cccccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeecc-CCCceeeEEe
Confidence 445568999999999 888887653 2344555533 222222222 3444555555
Q ss_pred ec---CCCEEEEEeCCCCCCCCCCeEEEEeCCCCcEEEEeecC----CceEEEEEeCCeEEEE---------------EC
Q 022387 136 LF---RCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFR----SEVRSVKLRRDRIIVV---------------LE 193 (298)
Q Consensus 136 ~~---~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~~~~~~~~~----~~v~~v~~~~~~l~v~---------------~~ 193 (298)
++ ++..++.++ .|++|||||+.+++++.++..+ ..+.+++|+++...++ .+
T Consensus 187 s~~~g~~~~LaSgS-------~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D 259 (356)
T 2w18_A 187 AEVQGMQEALLGTT-------IMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPV 259 (356)
T ss_dssp EEEETSTTEEEEEE-------TTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CC
T ss_pred eccCCCCceEEEec-------CCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCC
Confidence 55 344455555 6899999999999999998743 2466778888654431 13
Q ss_pred CeEEEEEcCCCeEEEEEe-----ccCCCcceEEEEeCCCCeEEEEecCCCceEEEEEcCCcc-eEeeccccccee-EEEE
Q 022387 194 QKIFVYNFADLKLLHQIE-----TIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIA-CFAL 266 (298)
Q Consensus 194 ~~I~iwd~~~~~~i~~~~-----~~~~~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~~-~~~~~~H~~~V~-~l~f 266 (298)
++|++||..+++.+..+. +|... .+..+.+ +.++| +|+.||+|+|||+.+++ +.++.+|...|. +++|
T Consensus 260 ~tIklWd~~tgk~l~v~~~~~p~Gh~~~--~lsg~~s--g~~lA-SgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vaf 334 (356)
T 2w18_A 260 FQLIVINPKTTLSVGVMLYCLPPGQAGR--FLEGDVK--DHCAA-AILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKW 334 (356)
T ss_dssp EEEEEEETTTTEEEEEEEECCCTTCCCC--EEEEEEE--TTEEE-EEETTSCEEEEETTTCSEEEEECCC--CCCCEEEE
T ss_pred cEEEEEECCCCEEEEEEEeeccCCCcce--eEccccC--CCEEE-EEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEE
Confidence 699999999999887663 22222 2333332 35666 59999999999999876 458889987654 6999
Q ss_pred CCCCCEEEEEeCCCCEEEEEEC
Q 022387 267 TQDGQLLATSSTKGTLVRIFNT 288 (298)
Q Consensus 267 spdg~~lAt~S~Dgt~IrIWd~ 288 (298)
||||++|||||.|++ |||||+
T Consensus 335 SPDG~~LaSGS~D~T-IklWd~ 355 (356)
T 2w18_A 335 SGTDSHLLAGQKDGN-IFVYHY 355 (356)
T ss_dssp CSSSSEEEEECTTSC-EEEEEE
T ss_pred CCCCCEEEEEECCCc-EEEecC
Confidence 999999999999999 999996
No 70
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.93 E-value=2.9e-23 Score=190.23 Aligned_cols=203 Identities=12% Similarity=0.144 Sum_probs=159.8
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEE
Q 022387 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i 160 (298)
..|...|++++|+|+|++|++|+.+| ++||++.+.+.+..... |...+..+.+ +++.+++++ .|+.|++
T Consensus 131 ~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~--~~~~l~~~~-------~dg~i~i 200 (401)
T 4aez_A 131 TDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAG-HQARVGCLSW--NRHVLSSGS-------RSGAIHH 200 (401)
T ss_dssp CCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEE--ETTEEEEEE-------TTSEEEE
T ss_pred cCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecC-CCCceEEEEE--CCCEEEEEc-------CCCCEEE
Confidence 34678999999999999999999866 88999998877665543 5666666665 667777777 6799999
Q ss_pred EeCCC-CcEEEEee-cCCceEEEEEeCC--eEEEEE-CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEec
Q 022387 161 WDDHQ-SRCIGELS-FRSEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPG 235 (298)
Q Consensus 161 WD~~~-~~~~~~~~-~~~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sG 235 (298)
||++. +..+..+. +...|.++.|+++ .++++. ++.|++||+++.+.+.++..|...+..+++++++...+.+.+|
T Consensus 201 ~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~g 280 (401)
T 4aez_A 201 HDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGG 280 (401)
T ss_dssp EETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECC
T ss_pred EecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecC
Confidence 99984 55565655 4468999999875 455555 4899999999999999998888888888888765433333224
Q ss_pred CCCceEEEEEcCCcceEeecccccceeEEEECCCCCEEEEEe--CCCCEEEEEECCCCcEEE
Q 022387 236 LQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSS--TKGTLVRIFNTLDGTLLQ 295 (298)
Q Consensus 236 s~dg~v~i~~~~~~~~~~~~~H~~~V~~l~fspdg~~lAt~S--~Dgt~IrIWd~~tg~~l~ 295 (298)
+.||.|++|+...........|...|++++|+|+|++|++++ .||. |+|||+.+++...
T Consensus 281 s~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~-i~v~~~~~~~~~~ 341 (401)
T 4aez_A 281 TMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNN-LSIWSYSSSGLTK 341 (401)
T ss_dssp TTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCE-EEEEEEETTEEEE
T ss_pred CCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCc-EEEEecCCcccee
Confidence 589999999998776553335778999999999999999954 8999 9999999976654
No 71
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.93 E-value=1.2e-23 Score=186.57 Aligned_cols=201 Identities=14% Similarity=0.135 Sum_probs=149.6
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEE
Q 022387 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i 160 (298)
..+...+..+.+++++.+|++|+.++ +++|+.............|...+..+.+..+....++++++ .|++|++
T Consensus 125 ~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~-----~d~~i~i 199 (340)
T 4aow_A 125 VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCG-----WDKLVKV 199 (340)
T ss_dssp ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEE-----TTSCEEE
T ss_pred cCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEc-----CCCEEEE
Confidence 45556889999999999999999866 78999877654433322256677888887665433222222 5799999
Q ss_pred EeCCCCcEEEEeecC-CceEEEEEeCC--eEEEEE-CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEecC
Q 022387 161 WDDHQSRCIGELSFR-SEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGL 236 (298)
Q Consensus 161 WD~~~~~~~~~~~~~-~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs 236 (298)
||+++++.+..+..+ ..|.+++|+++ .++++. ++.|++||+++.+.+..+..+. .+..++++ +++.+++ ++
T Consensus 200 ~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~-~v~~~~~~--~~~~~~~--~~ 274 (340)
T 4aow_A 200 WNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD-IINALCFS--PNRYWLC--AA 274 (340)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSS-CEEEEEEC--SSSSEEE--EE
T ss_pred EECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCc-eEEeeecC--CCCceee--cc
Confidence 999999988887654 58999999875 444444 5899999999999998887653 34444554 4456665 57
Q ss_pred CCceEEEEEcCCcceE----------eecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcE
Q 022387 237 QKGQVRVEHYASKRTK----------FIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTL 293 (298)
Q Consensus 237 ~dg~v~i~~~~~~~~~----------~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~ 293 (298)
.||.|++|++...... ...+|...|++|+|+|||++|||||.||+ |||||+++|++
T Consensus 275 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~-v~iW~~~tGtr 340 (340)
T 4aow_A 275 TGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNL-VRVWQVTIGTR 340 (340)
T ss_dssp ETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSC-EEEEEEEC---
T ss_pred CCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCE-EEEEeCCCcCC
Confidence 8999999998765321 34578999999999999999999999999 99999999974
No 72
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.93 E-value=2e-23 Score=191.08 Aligned_cols=197 Identities=11% Similarity=0.093 Sum_probs=157.6
Q ss_pred CeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCC
Q 022387 87 TLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ 165 (298)
Q Consensus 87 ~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~ 165 (298)
.+....|+++|++||+|+.++ ++||++.+.+....... |.+.+..+.+.+++..+++++ .|++|++||+++
T Consensus 99 ~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~s-------~d~~i~iwd~~~ 170 (420)
T 3vl1_A 99 YTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQA-HVSEITKLKFFPSGEALISSS-------QDMQLKIWSVKD 170 (420)
T ss_dssp EEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTS-SSSCEEEEEECTTSSEEEEEE-------TTSEEEEEETTT
T ss_pred ceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeeccc-ccCccEEEEECCCCCEEEEEe-------CCCeEEEEeCCC
Confidence 455557899999999999865 88999987766444322 688899999999998888887 689999999999
Q ss_pred CcEEEEeec-CCceEEEEEeCC--eEEEEE-CCeEEEEEcCCCeEEEEEeccC---CCcceEEEE---------------
Q 022387 166 SRCIGELSF-RSEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIETIA---NPKGLCAVS--------------- 223 (298)
Q Consensus 166 ~~~~~~~~~-~~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~~~i~~~~~~~---~~~~~~~~s--------------- 223 (298)
++.+..+.. ...|.++.|+++ .++++. ++.|++||+++++.+.++..+. ..+..+++.
T Consensus 171 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v 250 (420)
T 3vl1_A 171 GSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKK 250 (420)
T ss_dssp CCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCC
T ss_pred CcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcc
Confidence 988888774 468999999875 455554 5899999999999999987643 233333332
Q ss_pred ----eCCCCeEEEEecCCCceEEEEEcCCcce-E-eecccccceeEEEECCCCC-EEEEEeCCCCEEEEEECCCCcE
Q 022387 224 ----QGVGSLVLVCPGLQKGQVRVEHYASKRT-K-FIMAHDSRIACFALTQDGQ-LLATSSTKGTLVRIFNTLDGTL 293 (298)
Q Consensus 224 ----~~~d~~~la~sGs~dg~v~i~~~~~~~~-~-~~~~H~~~V~~l~fspdg~-~lAt~S~Dgt~IrIWd~~tg~~ 293 (298)
+++++.++++ |+.||.|++||+..... . ....|...|++++|+|+++ +|++|+.||. |+|||++++++
T Consensus 251 ~~~~~s~~~~~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~-i~vwd~~~~~~ 325 (420)
T 3vl1_A 251 NNLEFGTYGKYVIA-GHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGM-LAQWDLRSPEC 325 (420)
T ss_dssp CTTCSSCTTEEEEE-EETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSE-EEEEETTCTTS
T ss_pred cceEEcCCCCEEEE-EcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCe-EEEEEcCCCcC
Confidence 3456788884 99999999999987653 3 3456899999999999998 9999999999 99999999854
No 73
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.93 E-value=1.1e-23 Score=191.29 Aligned_cols=202 Identities=12% Similarity=0.233 Sum_probs=159.5
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCc------eEEEEeeecCCceEEEEEecC----C---CEEEEEe
Q 022387 81 SSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFR------EIFRRDFERGGGIGVVEMLFR----C---NILALVG 146 (298)
Q Consensus 81 ~~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~------~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~ 146 (298)
...|...|++++|+| ++|++|+.++ ++||+++..+ ....... |...+..+.+.++ + ..+++++
T Consensus 12 ~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~g~~~~~l~s~~ 88 (397)
T 1sq9_A 12 GKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFV-HKSGLHHVDVLQAIERDAFELCLVATTS 88 (397)
T ss_dssp SSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEEC-CTTCEEEEEEEEEEETTTEEEEEEEEEE
T ss_pred hhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEec-CCCcEEEEEEecccccCCccccEEEEEc
Confidence 357888999999999 7899998765 8899998876 4444443 6788888988887 7 7777777
Q ss_pred CCCCCCCCCCeEEEEeCCCCcE-----EEEeecC------CceEEEEEe----CC--e-EEEEE-CCeEEEEEcCC----
Q 022387 147 GGPDPQYPLNKVMIWDDHQSRC-----IGELSFR------SEVRSVKLR----RD--R-IIVVL-EQKIFVYNFAD---- 203 (298)
Q Consensus 147 ~~~~~~~~d~~v~iWD~~~~~~-----~~~~~~~------~~v~~v~~~----~~--~-l~v~~-~~~I~iwd~~~---- 203 (298)
.|+.|++||+.+++. +..+..+ ..|.++.|+ ++ . ++++. ++.|++||+.+
T Consensus 89 -------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 161 (397)
T 1sq9_A 89 -------FSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADE 161 (397)
T ss_dssp -------TTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSH
T ss_pred -------CCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccc
Confidence 679999999998876 6666655 789999999 53 4 55554 58999999988
Q ss_pred --CeEEE-----EEec-------cCCCcceEEEEeCCCCeEEEEecCCCceEEEEEcCCcc-eEeecc---c---cccee
Q 022387 204 --LKLLH-----QIET-------IANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-TKFIMA---H---DSRIA 262 (298)
Q Consensus 204 --~~~i~-----~~~~-------~~~~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~~-~~~~~~---H---~~~V~ 262 (298)
.+.+. ++.. |...+..++++ +++ +++ +|+.||.|++|++.... +..+.. | ...|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~-~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~ 237 (397)
T 1sq9_A 162 SNSLTLNWSPTLELQGTVESPMTPSQFATSVDIS--ERG-LIA-TGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIR 237 (397)
T ss_dssp HHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEEC--TTS-EEE-EECTTSEEEEEETTTTEEEEEEECCC---CCCCCEE
T ss_pred cccceeeccCcceeeeeeccccCCCCCceEEEEC--CCc-eEE-EEeCCCcEEEEECCCCceeEEEeccccccccCCccc
Confidence 66666 7754 45555555554 455 666 48999999999998654 457778 9 99999
Q ss_pred EEEECCCCCEEEEEeCC---CCEEEEEECCCCcEEEec
Q 022387 263 CFALTQDGQLLATSSTK---GTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 263 ~l~fspdg~~lAt~S~D---gt~IrIWd~~tg~~l~~~ 297 (298)
+++|+|++++||+++.| |. |+|||+++++++.++
T Consensus 238 ~i~~~~~~~~l~~~~~d~~~g~-i~i~d~~~~~~~~~~ 274 (397)
T 1sq9_A 238 SVKFSPQGSLLAIAHDSNSFGC-ITLYETEFGERIGSL 274 (397)
T ss_dssp EEEECSSTTEEEEEEEETTEEE-EEEEETTTCCEEEEE
T ss_pred eEEECCCCCEEEEEecCCCCce-EEEEECCCCccccee
Confidence 99999999999999999 98 999999999988765
No 74
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.92 E-value=2.8e-23 Score=188.43 Aligned_cols=194 Identities=19% Similarity=0.221 Sum_probs=149.4
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCC-EEEEEeCCCCCCCCCCeEEE
Q 022387 83 SPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCN-ILALVGGGPDPQYPLNKVMI 160 (298)
Q Consensus 83 ~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~v~i 160 (298)
.+...|.+++|+|++++|++|+.++ +++||+. .+.+..... |...+..+.+.+++. .+++++ .|++|++
T Consensus 161 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~-------~d~~i~i 231 (383)
T 3ei3_B 161 SWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEIFKEKL-HKAKVTHAEFNPRCDWLMATSS-------VDATVKL 231 (383)
T ss_dssp CSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCEEEEEEC-SSSCEEEEEECSSCTTEEEEEE-------TTSEEEE
T ss_pred CCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCEEEEecc-CCCcEEEEEECCCCCCEEEEEe-------CCCEEEE
Confidence 3447899999999999999999866 7899994 444444443 678899999988887 677776 6899999
Q ss_pred EeCCC----CcEEEEeecCCceEEEEEeC-C--eEEEEE-CCeEEEEEcCCCeEEEEEeccCC-------Cc--------
Q 022387 161 WDDHQ----SRCIGELSFRSEVRSVKLRR-D--RIIVVL-EQKIFVYNFADLKLLHQIETIAN-------PK-------- 217 (298)
Q Consensus 161 WD~~~----~~~~~~~~~~~~v~~v~~~~-~--~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~-------~~-------- 217 (298)
||+++ +..+..+.+...|.++.|++ + .++++. ++.|++||+++++.+.++..|.. ++
T Consensus 232 wd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 311 (383)
T 3ei3_B 232 WDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMY 311 (383)
T ss_dssp EEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSS
T ss_pred EeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCC
Confidence 99998 67777787778999999988 4 455554 58999999998887777775432 11
Q ss_pred ceEEEEeCCCCeEEEEecCCCceEEEEEcCCcc-eEeecc--cccceeEEEECCCCCEEEEEeCCCCEEEEEECCC
Q 022387 218 GLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-TKFIMA--HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLD 290 (298)
Q Consensus 218 ~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~~-~~~~~~--H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~t 290 (298)
..+++...+++.+ +|+.||.|++|++.+.. +..+.+ |...+.+++|+|+|++||+|+ ||+ |+|||+++
T Consensus 312 ~~~~~~~s~dg~~---s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~-i~iw~~~~ 382 (383)
T 3ei3_B 312 DLIVAGRYPDDQL---LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFN-ILIWNRED 382 (383)
T ss_dssp SEEEEECBCCTTT---CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTE-EEEEECC-
T ss_pred CceEEEecCCccc---ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCc-EEEEecCC
Confidence 1222333344444 47899999999997655 457776 567899999999999999998 998 99999875
No 75
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.92 E-value=7.6e-23 Score=179.14 Aligned_cols=201 Identities=13% Similarity=0.094 Sum_probs=163.9
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEE
Q 022387 81 SSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (298)
Q Consensus 81 ~~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~ 159 (298)
...|...|++++| +++++|++|+.+| ++||++.+.+....... |...+..+.+.+++..+++++ .|+.|+
T Consensus 14 l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-------~dg~i~ 84 (313)
T 3odt_A 14 LKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYT-GQGFLNSVCYDSEKELLLFGG-------KDTMIN 84 (313)
T ss_dssp ECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEE-CSSCEEEEEEETTTTEEEEEE-------TTSCEE
T ss_pred hhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeec-CCccEEEEEECCCCCEEEEec-------CCCeEE
Confidence 3578889999999 9999999999866 88999988776555544 688899999999999988888 679999
Q ss_pred EEeCCCC---cEEEEee-cCCceEEEEEeCCeEEEEE-CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEe
Q 022387 160 IWDDHQS---RCIGELS-FRSEVRSVKLRRDRIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCP 234 (298)
Q Consensus 160 iWD~~~~---~~~~~~~-~~~~v~~v~~~~~~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~s 234 (298)
+||+... +.+..+. +...|.++.|+++.++++. ++.|++|| ..+.+..+..|...+..+++.+. ++.+++ +
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~-~ 160 (313)
T 3odt_A 85 GVPLFATSGEDPLYTLIGHQGNVCSLSFQDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSF-SENKFL-T 160 (313)
T ss_dssp EEETTCCTTSCC-CEECCCSSCEEEEEEETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEET-TTTEEE-E
T ss_pred EEEeeecCCCCcccchhhcccCEEEEEecCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccC-CCCEEE-E
Confidence 9998764 4444554 4468999999888888876 58999999 67788888888888877777763 235666 4
Q ss_pred cCCCceEEEEEcCCcceEeecc-cccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 235 GLQKGQVRVEHYASKRTKFIMA-HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 235 Gs~dg~v~i~~~~~~~~~~~~~-H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
|+.||.|++|+. .+....+.. |...|++++|+|+++ |++++.||. |+|||++++++++++
T Consensus 161 ~~~d~~i~i~d~-~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~-i~i~d~~~~~~~~~~ 221 (313)
T 3odt_A 161 ASADKTIKLWQN-DKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGL-IKLVDMHTGDVLRTY 221 (313)
T ss_dssp EETTSCEEEEET-TEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSE-EEEEETTTCCEEEEE
T ss_pred EECCCCEEEEec-CceEEEEeccCcccEEEEEEcCCCe-EEEccCCCe-EEEEECCchhhhhhh
Confidence 899999999993 334556666 999999999999998 999999999 999999999988765
No 76
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.92 E-value=2.6e-23 Score=188.62 Aligned_cols=201 Identities=11% Similarity=0.126 Sum_probs=151.3
Q ss_pred CCCCCeEEEEEcC-CCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCC---CEEEEEeCCCCCCCCCCe
Q 022387 83 SPPPTLLHISFNQ-DHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRC---NILALVGGGPDPQYPLNK 157 (298)
Q Consensus 83 ~~~~~V~~v~fs~-dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~d~~ 157 (298)
.|...|.+++|+| ++.+|++|+.++ +++|++.+.+....... ...+..+.+.+.. ..+++++ .++.
T Consensus 97 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 167 (408)
T 4a11_B 97 VHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNF--EETVYSHHMSPVSTKHCLVAVGT-------RGPK 167 (408)
T ss_dssp CCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEEC--SSCEEEEEECSSCSSCCEEEEEE-------SSSS
T ss_pred cCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccC--CCceeeeEeecCCCCCcEEEEEc-------CCCe
Confidence 4778999999999 778999998755 88999999887666653 6777777776643 3666666 6799
Q ss_pred EEEEeCCCCcEEEEeec-CCceEEEEEeCCe---EEEEE-CCeEEEEEcCCCe-EEEEE---------------eccCCC
Q 022387 158 VMIWDDHQSRCIGELSF-RSEVRSVKLRRDR---IIVVL-EQKIFVYNFADLK-LLHQI---------------ETIANP 216 (298)
Q Consensus 158 v~iWD~~~~~~~~~~~~-~~~v~~v~~~~~~---l~v~~-~~~I~iwd~~~~~-~i~~~---------------~~~~~~ 216 (298)
|++||+++++.+..+.. ...|.++.|+++. ++++. ++.|++||+++.+ .+..+ ..|...
T Consensus 168 v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (408)
T 4a11_B 168 VQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGK 247 (408)
T ss_dssp EEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSC
T ss_pred EEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCc
Confidence 99999999988877774 4689999998753 44444 5899999997655 44444 233334
Q ss_pred cceEEEEeCCCCeEEEEecCCCceEEEEEcCCc-----------------------------------------------
Q 022387 217 KGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASK----------------------------------------------- 249 (298)
Q Consensus 217 ~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~----------------------------------------------- 249 (298)
+ .++.+++++.+|++ |+.||.|++|++...
T Consensus 248 v--~~~~~~~~~~~l~~-~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~ 324 (408)
T 4a11_B 248 V--NGLCFTSDGLHLLT-VGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSG 324 (408)
T ss_dssp E--EEEEECTTSSEEEE-EETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTC
T ss_pred e--eEEEEcCCCCEEEE-ecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCC
Confidence 4 44445556688884 889999999997642
Q ss_pred -ceEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEe
Q 022387 250 -RTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQE 296 (298)
Q Consensus 250 -~~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~ 296 (298)
.+..+.+|...|++++|+|+|++||+++.||. |+|||+.+++.+.+
T Consensus 325 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~-i~iw~~~~~~~~~~ 371 (408)
T 4a11_B 325 EQITMLKGHYKTVDCCVFQSNFQELYSGSRDCN-ILAWVPSLYEPVPD 371 (408)
T ss_dssp CEEEEECCCSSCEEEEEEETTTTEEEEEETTSC-EEEEEECC------
T ss_pred cceeeeccCCCeEEEEEEcCCCCEEEEECCCCe-EEEEeCCCCCccCC
Confidence 23356789999999999999999999999999 99999999987653
No 77
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.92 E-value=8.6e-23 Score=189.81 Aligned_cols=200 Identities=11% Similarity=0.169 Sum_probs=161.9
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEec--CCCEEEEEeCCCCCCCCCCeE
Q 022387 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLF--RCNILALVGGGPDPQYPLNKV 158 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~v 158 (298)
..|...|.+++|++++ +|++|+.++ +++||+++.+....... |.+.+..+.+.+ ++..+++++ .|++|
T Consensus 159 ~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~-h~~~v~~l~~~~~~~~~~l~s~s-------~d~~i 229 (464)
T 3v7d_B 159 SGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEG-HNSTVRCLDIVEYKNIKYIVTGS-------RDNTL 229 (464)
T ss_dssp CCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEEEESSSCEEEEEEE-------TTSCE
T ss_pred eCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECC-CCCccEEEEEecCCCCCEEEEEc-------CCCcE
Confidence 4688899999999998 888888755 89999999877655543 678888888875 445566666 67999
Q ss_pred EEEeCCCCcEE-----------------------EEee-cCCceEEEEEeCCeEEEEE-CCeEEEEEcCCCeEEEEEecc
Q 022387 159 MIWDDHQSRCI-----------------------GELS-FRSEVRSVKLRRDRIIVVL-EQKIFVYNFADLKLLHQIETI 213 (298)
Q Consensus 159 ~iWD~~~~~~~-----------------------~~~~-~~~~v~~v~~~~~~l~v~~-~~~I~iwd~~~~~~i~~~~~~ 213 (298)
++||+.++... ..+. +...|.++..+.+.++++. ++.|++||+.+++++.++..|
T Consensus 230 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~ 309 (464)
T 3v7d_B 230 HVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGH 309 (464)
T ss_dssp EEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred EEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC
Confidence 99999876532 2222 3347888888888888877 589999999999999999988
Q ss_pred CCCcceEEEEeCCCCeEEEEecCCCceEEEEEcCCcc-eEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCc
Q 022387 214 ANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGT 292 (298)
Q Consensus 214 ~~~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~~-~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~ 292 (298)
...+..++++++ +.+++ +|+.||.|++|+..+.. +.++.+|...|++++|+ +++|++++.||+ |+|||+.+++
T Consensus 310 ~~~v~~~~~~~~--~~~l~-sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~-v~vwd~~~~~ 383 (464)
T 3v7d_B 310 TDRIYSTIYDHE--RKRCI-SASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGS-IRGWDANDYS 383 (464)
T ss_dssp SSCEEEEEEETT--TTEEE-EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSE-EEEEETTTCC
T ss_pred CCCEEEEEEcCC--CCEEE-EEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCc-EEEEECCCCc
Confidence 877777777665 47777 49999999999997654 55899999999999997 589999999999 9999999987
Q ss_pred EEEe
Q 022387 293 LLQE 296 (298)
Q Consensus 293 ~l~~ 296 (298)
...+
T Consensus 384 ~~~~ 387 (464)
T 3v7d_B 384 RKFS 387 (464)
T ss_dssp EEEE
T ss_pred eeee
Confidence 7654
No 78
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.92 E-value=3.4e-24 Score=204.04 Aligned_cols=196 Identities=10% Similarity=0.046 Sum_probs=147.5
Q ss_pred CCCCCeEEEEEcCC------CCEEEEEcCCe-EEEEEcCCCceE-----------EEEeeecCCceEEEEEecCCCEEEE
Q 022387 83 SPPPTLLHISFNQD------HGCFAAGTDHG-FRIYNCDPFREI-----------FRRDFERGGGIGVVEMLFRCNILAL 144 (298)
Q Consensus 83 ~~~~~V~~v~fs~d------g~~lasgs~~g-i~vw~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (298)
.|...|.+|+|+|+ +.+||+|+.|+ |+||++...... ..... |...+..+.+... ..+++
T Consensus 205 ~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~-h~~~v~sv~~s~~-~~las 282 (524)
T 2j04_B 205 HSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSL-ADSLITTFDFLSP-TTVVC 282 (524)
T ss_dssp ECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECC-TTTCEEEEEESSS-SEEEE
T ss_pred ecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEc-CCCCEEEEEecCC-CeEEE
Confidence 34568999999997 57999999865 899999765321 12222 5667777777654 45666
Q ss_pred EeCCCCCCCCCCeEEEEeCCCCc-EEEEeec-CCceEEE--EEeCC---eEEEEE-CCeEEEEEcCCCeEEEEEeccCC-
Q 022387 145 VGGGPDPQYPLNKVMIWDDHQSR-CIGELSF-RSEVRSV--KLRRD---RIIVVL-EQKIFVYNFADLKLLHQIETIAN- 215 (298)
Q Consensus 145 ~~~~~~~~~~d~~v~iWD~~~~~-~~~~~~~-~~~v~~v--~~~~~---~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~- 215 (298)
++ .|++|++||++++. ....+.. ...|.++ .++++ .++.+. |++|+|||+++++++.++..|..
T Consensus 283 gs-------~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~ 355 (524)
T 2j04_B 283 GF-------KNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRG 355 (524)
T ss_dssp EE-------TTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSC
T ss_pred Ee-------CCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccccccccc
Confidence 55 68999999999764 3444554 4689998 45654 344444 58999999998888777776653
Q ss_pred -CcceEEEEeCCCCeEEEEecCCCceEEEEEcCCcc-eEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCC
Q 022387 216 -PKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDG 291 (298)
Q Consensus 216 -~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~~-~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg 291 (298)
.+..++++++ +..++ +|+.|+.|++|+..... +.++.+|.+.|++|+|||+|++||+||.||+ |||||+..+
T Consensus 356 ~~v~~v~fsp~--~~~l~-s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgt-v~lwd~~~~ 429 (524)
T 2j04_B 356 SNLVPVVYCPQ--IYSYI-YSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGS-LIITNAARR 429 (524)
T ss_dssp CSCCCEEEETT--TTEEE-EECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTE-EECCBSCSS
T ss_pred CcccceEeCCC--cCeEE-EeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCE-EEEEechHh
Confidence 2455666664 46676 48889999999988755 4678899999999999999999999999999 999997643
No 79
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.92 E-value=2.5e-24 Score=192.48 Aligned_cols=196 Identities=13% Similarity=0.133 Sum_probs=158.9
Q ss_pred CCCCeEEEEEcCC----CCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEec-CCCEEEEEeCCCCCCCCCCe
Q 022387 84 PPPTLLHISFNQD----HGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLF-RCNILALVGGGPDPQYPLNK 157 (298)
Q Consensus 84 ~~~~V~~v~fs~d----g~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~ 157 (298)
|...|++++|+|+ |.+|++|+.++ ++||++.+.+.+..... |...+..+.+.+ ++..+++++ .|++
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~l~s~~-------~dg~ 139 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVG-HGNAINELKFHPRDPNLLLSVS-------KDHA 139 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEES-CCSCEEEEEECSSCTTEEEEEE-------TTSC
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecC-CCCcEEEEEECCCCCCEEEEEe-------CCCe
Confidence 5568999999999 67999999866 88999998877655543 678889999988 788888877 6899
Q ss_pred EEEEeCCCCcEEEEe----ecCCceEEEEEeCC--eEEEEE-CCeEEEEEcCCCeEEEEEec------------------
Q 022387 158 VMIWDDHQSRCIGEL----SFRSEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIET------------------ 212 (298)
Q Consensus 158 v~iWD~~~~~~~~~~----~~~~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~~~i~~~~~------------------ 212 (298)
|++||+++++.+..+ .+...|.++.|+++ .++++. ++.|++||+++.+.+..+..
T Consensus 140 i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (366)
T 3k26_A 140 LRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKI 219 (366)
T ss_dssp EEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEE
T ss_pred EEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceee
Confidence 999999999988887 35568999999875 455554 58999999987765443332
Q ss_pred ----------cCCCcceEEEEeCCCCeEEEEecCCCceEEEEEcCCcc---------------eEeecccccceeEEEEC
Q 022387 213 ----------IANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR---------------TKFIMAHDSRIACFALT 267 (298)
Q Consensus 213 ----------~~~~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~~---------------~~~~~~H~~~V~~l~fs 267 (298)
|...+..++++ + .+++ +|+.||.|++|+..... +..+..|...|++++|+
T Consensus 220 ~~~~~~~~~~~~~~v~~~~~~--~--~~l~-~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 294 (366)
T 3k26_A 220 HFPDFSTRDIHRNYVDCVRWL--G--DLIL-SKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFS 294 (366)
T ss_dssp CCCSEEECSSCSSCCCEEEEE--T--TEEE-EECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCE
T ss_pred ccCccccccCCcceEEEEEEc--C--CEEE-EEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEc
Confidence 66777777776 3 4666 48999999999986532 44778899999999999
Q ss_pred CC--CCEEEEEeCCCCEEEEEECCCCcE
Q 022387 268 QD--GQLLATSSTKGTLVRIFNTLDGTL 293 (298)
Q Consensus 268 pd--g~~lAt~S~Dgt~IrIWd~~tg~~ 293 (298)
|+ |++||+|+.||. |+|||+.++++
T Consensus 295 ~~~~~~~l~~~~~dg~-i~vwd~~~~~~ 321 (366)
T 3k26_A 295 MDFWQKMLALGNQVGK-LYVWDLEVEDP 321 (366)
T ss_dssp ECTTSSEEEEECTTSC-EEEEECCSSSG
T ss_pred CCCCCcEEEEEecCCc-EEEEECCCCCC
Confidence 99 999999999999 99999999863
No 80
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.2e-23 Score=194.13 Aligned_cols=205 Identities=13% Similarity=0.161 Sum_probs=152.7
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcC---CCceEEEEee------e-----cCCceEEEEEe--cCCCEEEEE
Q 022387 83 SPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCD---PFREIFRRDF------E-----RGGGIGVVEML--FRCNILALV 145 (298)
Q Consensus 83 ~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~---~~~~~~~~~~------~-----~~~~~~~~~~~--~~~~~~~~~ 145 (298)
.|...|++++|+|++++|++|+.++ ++||+++ ..+....... . +...+..+.+. .++..++++
T Consensus 109 ~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 188 (437)
T 3gre_A 109 DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVAL 188 (437)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEE
T ss_pred cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEE
Confidence 5778999999999999999999866 8899985 3333222111 0 12223333322 345566666
Q ss_pred eCCCCCCCCCCeEEEEeCCCCcEEEEeec---CCceEEEEEeCC--eEEEEE-CCeEEEEEcCCCeEEEEEe-ccCCCcc
Q 022387 146 GGGPDPQYPLNKVMIWDDHQSRCIGELSF---RSEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIE-TIANPKG 218 (298)
Q Consensus 146 ~~~~~~~~~d~~v~iWD~~~~~~~~~~~~---~~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~~~i~~~~-~~~~~~~ 218 (298)
+ .|++|++||+++++.+..+.. ...|.+++|+++ .++++. ++.|++||+++++++.++. .|..++.
T Consensus 189 ~-------~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~ 261 (437)
T 3gre_A 189 T-------NLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPIT 261 (437)
T ss_dssp E-------TTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEE
T ss_pred e-------CCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceE
Confidence 6 679999999999999888875 468999999875 455554 5799999999999999886 4555555
Q ss_pred eEEEEeC--CCCeEEEEecCCCceEEEEEcCCcce-Eeec------------------------c--cccceeEEEECCC
Q 022387 219 LCAVSQG--VGSLVLVCPGLQKGQVRVEHYASKRT-KFIM------------------------A--HDSRIACFALTQD 269 (298)
Q Consensus 219 ~~~~s~~--~d~~~la~sGs~dg~v~i~~~~~~~~-~~~~------------------------~--H~~~V~~l~fspd 269 (298)
.+++++. +++.+|+ +|+.||.|++||+..... ..+. + |...|++|+|+ +
T Consensus 262 ~~~~~~~~s~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~ 339 (437)
T 3gre_A 262 HVEVCQFYGKNSVIVV-GGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-N 339 (437)
T ss_dssp EEEECTTTCTTEEEEE-EESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-T
T ss_pred EEEeccccCCCccEEE-EEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-C
Confidence 5655443 5667787 599999999999986542 2333 2 67789999999 8
Q ss_pred CCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 270 GQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 270 g~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
+++|++|+.||+ |+|||+.++++++.+
T Consensus 340 ~~~l~s~~~d~~-i~~wd~~~~~~~~~~ 366 (437)
T 3gre_A 340 DKILLTDEATSS-IVMFSLNELSSSKAV 366 (437)
T ss_dssp TEEEEEEGGGTE-EEEEETTCGGGCEEE
T ss_pred ceEEEecCCCCe-EEEEECCCcccceEE
Confidence 899999999999 999999999876553
No 81
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.92 E-value=4.7e-23 Score=204.08 Aligned_cols=205 Identities=11% Similarity=0.127 Sum_probs=169.7
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEE
Q 022387 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i 160 (298)
..|...|++++|+|||.+||+|+.+| ++||++.+++....... |.+.+..+.+++++..+++++ .|+.|++
T Consensus 10 ~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~-------~dg~i~v 81 (814)
T 3mkq_A 10 SNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQV-TETPVRAGKFIARKNWIIVGS-------DDFRIRV 81 (814)
T ss_dssp EEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEEEGGGTEEEEEE-------TTSEEEE
T ss_pred ecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEec-CCCcEEEEEEeCCCCEEEEEe-------CCCeEEE
Confidence 46778999999999999999999865 88999999877666554 688899999999999999888 6799999
Q ss_pred EeCCCCcEEEEeec-CCceEEEEEeCC--eEEEEE-CCeEEEEEcCCC-eEEEEEeccCCCcceEEEEeCCCCeEEEEec
Q 022387 161 WDDHQSRCIGELSF-RSEVRSVKLRRD--RIIVVL-EQKIFVYNFADL-KLLHQIETIANPKGLCAVSQGVGSLVLVCPG 235 (298)
Q Consensus 161 WD~~~~~~~~~~~~-~~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~-~~i~~~~~~~~~~~~~~~s~~~d~~~la~sG 235 (298)
||+.+++.+..+.. ...|.++.|+++ .++++. ++.|++||+.+. .....+..|..++..+++++. ++..++ +|
T Consensus 82 w~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~-~~~~l~-~~ 159 (814)
T 3mkq_A 82 FNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPK-DPSTFA-SG 159 (814)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETT-EEEEEE-EE
T ss_pred EECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcC-CCCEEE-EE
Confidence 99999999888874 468999999976 355555 489999999876 777788888777777777762 336676 48
Q ss_pred CCCceEEEEEcCCcc-eEeecc-cccceeEEEECC--CCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 236 LQKGQVRVEHYASKR-TKFIMA-HDSRIACFALTQ--DGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 236 s~dg~v~i~~~~~~~-~~~~~~-H~~~V~~l~fsp--dg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
+.||.|++|+..... ...+.. |...|++++|+| ++.+|++++.||+ |+|||+.+++++.++
T Consensus 160 ~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~-i~~~d~~~~~~~~~~ 224 (814)
T 3mkq_A 160 CLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLT-IKIWDYQTKSCVATL 224 (814)
T ss_dssp ETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSE-EEEEETTTTEEEEEE
T ss_pred eCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCE-EEEEECCCCcEEEEE
Confidence 999999999987654 334544 448999999999 9999999999999 999999999887664
No 82
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.92 E-value=2.1e-24 Score=196.93 Aligned_cols=203 Identities=13% Similarity=0.174 Sum_probs=161.0
Q ss_pred cCCCCCCeEEEEEcCC-CCEEEEEcCCe-EEEEEcCCCc------eEEEE--eeecCCceEEEEEecC-CCEEEEEeCCC
Q 022387 81 SSSPPPTLLHISFNQD-HGCFAAGTDHG-FRIYNCDPFR------EIFRR--DFERGGGIGVVEMLFR-CNILALVGGGP 149 (298)
Q Consensus 81 ~~~~~~~V~~v~fs~d-g~~lasgs~~g-i~vw~~~~~~------~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 149 (298)
...|...|++++|+|+ +++|++|+.++ +++|++.+.+ ..... ...|...+..+.+.++ ...+++++
T Consensus 109 ~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--- 185 (416)
T 2pm9_A 109 FSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAG--- 185 (416)
T ss_dssp CCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEES---
T ss_pred ccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEc---
Confidence 3567889999999998 89999999865 8899998765 32222 1115677888888887 56666666
Q ss_pred CCCCCCCeEEEEeCCCCcEEEEeec-------CCceEEEEEeCC---eEEEEEC-C---eEEEEEcCCC-eEEEEEe-cc
Q 022387 150 DPQYPLNKVMIWDDHQSRCIGELSF-------RSEVRSVKLRRD---RIIVVLE-Q---KIFVYNFADL-KLLHQIE-TI 213 (298)
Q Consensus 150 ~~~~~d~~v~iWD~~~~~~~~~~~~-------~~~v~~v~~~~~---~l~v~~~-~---~I~iwd~~~~-~~i~~~~-~~ 213 (298)
.|+.|++||+++++.+..+.. ...|.++.|+++ .++++.. + .|++||+++. +++..+. .|
T Consensus 186 ----~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~ 261 (416)
T 2pm9_A 186 ----SSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGH 261 (416)
T ss_dssp ----SSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCC
T ss_pred ----CCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCc
Confidence 679999999999998888876 457999999975 3555554 4 9999999875 6667777 67
Q ss_pred CCCcceEEEEeCCCCeEEEEecCCCceEEEEEcCCcc-eEeecccccceeEEEECCCC-CEEEEEeCCCCEEEEEECCCC
Q 022387 214 ANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDG-QLLATSSTKGTLVRIFNTLDG 291 (298)
Q Consensus 214 ~~~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~~-~~~~~~H~~~V~~l~fspdg-~~lAt~S~Dgt~IrIWd~~tg 291 (298)
...+..+++++. ++.+|+ +|+.||.|++|++.... +..+.+|...|++++|+|++ .+||+++.|++ |+|||+.++
T Consensus 262 ~~~v~~~~~s~~-~~~~l~-s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~-i~iw~~~~~ 338 (416)
T 2pm9_A 262 QKGILSLDWCHQ-DEHLLL-SSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNK-IEVQTLQNL 338 (416)
T ss_dssp SSCEEEEEECSS-CSSCEE-EEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSE-EEEEESCCC
T ss_pred cCceeEEEeCCC-CCCeEE-EEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCc-EEEEEccCC
Confidence 766666666652 446777 48999999999988754 55889999999999999999 89999999999 999999987
Q ss_pred cE
Q 022387 292 TL 293 (298)
Q Consensus 292 ~~ 293 (298)
+.
T Consensus 339 ~~ 340 (416)
T 2pm9_A 339 TN 340 (416)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 83
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.92 E-value=3.5e-23 Score=192.61 Aligned_cols=202 Identities=9% Similarity=0.087 Sum_probs=159.1
Q ss_pred CCeEEEEEcCCCCEEEEEcCCeEEEEEcCCCc---eEEEEeee-------------------------------------
Q 022387 86 PTLLHISFNQDHGCFAAGTDHGFRIYNCDPFR---EIFRRDFE------------------------------------- 125 (298)
Q Consensus 86 ~~V~~v~fs~dg~~lasgs~~gi~vw~~~~~~---~~~~~~~~------------------------------------- 125 (298)
.++.+++|++||++|+++.++.|++|++.+++ .+......
T Consensus 5 ~p~~~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSI 84 (450)
T ss_dssp CCCCEEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC------------------------------------
T ss_pred ccEEEEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCccc
Confidence 37899999999999999888889999998887 43333210
Q ss_pred ----------------cCCceEEEEEecCCCEE-EEEeCCCCCCCCCCeEEEEeCC--CCcEEEEee---cCCceEEEEE
Q 022387 126 ----------------RGGGIGVVEMLFRCNIL-ALVGGGPDPQYPLNKVMIWDDH--QSRCIGELS---FRSEVRSVKL 183 (298)
Q Consensus 126 ----------------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~v~iWD~~--~~~~~~~~~---~~~~v~~v~~ 183 (298)
|.+.+..+.+++++..+ ++++ .|++|+|||+. +++.+..+. +...|.++.|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~-------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (450)
T 2vdu_B 85 KRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACAD-------SDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISI 157 (450)
T ss_dssp ---------------CCCCCEEEEEECTTSSEEEEEEG-------GGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEE
T ss_pred cccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEEC-------CCCeEEEEECcCCCCceeeeeecccCCCCceEEEE
Confidence 11147788888888886 4544 57999999999 787777764 4468999999
Q ss_pred eCC--eEEEEE-CCeEEEEEcCCCeEEE----EEeccCCCcceEEEEeCC-CCeEEEEecCCCceEEEEEcCCcc-eEe-
Q 022387 184 RRD--RIIVVL-EQKIFVYNFADLKLLH----QIETIANPKGLCAVSQGV-GSLVLVCPGLQKGQVRVEHYASKR-TKF- 253 (298)
Q Consensus 184 ~~~--~l~v~~-~~~I~iwd~~~~~~i~----~~~~~~~~~~~~~~s~~~-d~~~la~sGs~dg~v~i~~~~~~~-~~~- 253 (298)
+++ .++++. ++.|++|++.+.+... .+..|...+..+++++++ .+.+|+ +|+.||.|++|++.... +..
T Consensus 158 sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~-s~~~d~~i~vwd~~~~~~~~~~ 236 (450)
T 2vdu_B 158 AEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFII-TSDRDEHIKISHYPQCFIVDKW 236 (450)
T ss_dssp CTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEE-EEETTSCEEEEEESCTTCEEEE
T ss_pred cCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEE-EEcCCCcEEEEECCCCceeeee
Confidence 875 455554 4899999998776543 667777777778888761 146777 58999999999998765 334
Q ss_pred ecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 254 IMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 254 ~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
+.+|...|++++|+ +|++||+++.|++ |+|||++++++++++
T Consensus 237 ~~~h~~~v~~~~~s-d~~~l~s~~~d~~-v~vwd~~~~~~~~~~ 278 (450)
T 2vdu_B 237 LFGHKHFVSSICCG-KDYLLLSAGGDDK-IFAWDWKTGKNLSTF 278 (450)
T ss_dssp CCCCSSCEEEEEEC-STTEEEEEESSSE-EEEEETTTCCEEEEE
T ss_pred ecCCCCceEEEEEC-CCCEEEEEeCCCe-EEEEECCCCcEeeee
Confidence 66899999999999 9999999999999 999999999988764
No 84
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.92 E-value=2e-23 Score=186.23 Aligned_cols=204 Identities=11% Similarity=0.118 Sum_probs=157.5
Q ss_pred CCCCCCeEEEEEcCCCCE-EEEEcC---Ce-EEEEEcCCCceEEEEeeecCCceEEEEEecC---CCEEEEEeCCCCCCC
Q 022387 82 SSPPPTLLHISFNQDHGC-FAAGTD---HG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFR---CNILALVGGGPDPQY 153 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~-lasgs~---~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 153 (298)
..|...|.+++|+|++.. +++|+. ++ ++||++.+.+......+.|...+..+.+.++ +..+++++
T Consensus 15 ~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~------- 87 (357)
T 3i2n_A 15 KGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGD------- 87 (357)
T ss_dssp EECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEE-------
T ss_pred cCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEec-------
Confidence 458889999999999964 556754 45 8899999887655544446788888888877 47777777
Q ss_pred CCCeEEEEeCCCCc-EEEEeec-CCceEEEEEe------CC--eEEEEE-CCeEEEEEcCCCe-EEEEEeccCC----Cc
Q 022387 154 PLNKVMIWDDHQSR-CIGELSF-RSEVRSVKLR------RD--RIIVVL-EQKIFVYNFADLK-LLHQIETIAN----PK 217 (298)
Q Consensus 154 ~d~~v~iWD~~~~~-~~~~~~~-~~~v~~v~~~------~~--~l~v~~-~~~I~iwd~~~~~-~i~~~~~~~~----~~ 217 (298)
.|+.|++||+.+++ .+..+.. ...|.++.+. ++ .++++. ++.|++||+.+.+ .+..+..+.. .+
T Consensus 88 ~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v 167 (357)
T 3i2n_A 88 FGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDC 167 (357)
T ss_dssp TTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCE
T ss_pred CCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCce
Confidence 67999999999887 6666664 4578888653 33 555555 5899999998876 6777766544 33
Q ss_pred ceEEEE--eCCCCeEEEEecCCCceEEEEEcCCcceEeecccccceeEEEECC---CCCEEEEEeCCCCEEEEEECCCCc
Q 022387 218 GLCAVS--QGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQ---DGQLLATSSTKGTLVRIFNTLDGT 292 (298)
Q Consensus 218 ~~~~~s--~~~d~~~la~sGs~dg~v~i~~~~~~~~~~~~~H~~~V~~l~fsp---dg~~lAt~S~Dgt~IrIWd~~tg~ 292 (298)
..++++ +++++.++++ |+.||.|++|++..........|...|++++|+| ++.+|++++.||. |+|||+++++
T Consensus 168 ~~~~~~~~~~~~~~~l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~-i~i~d~~~~~ 245 (357)
T 3i2n_A 168 WTVAFGNAYNQEERVVCA-GYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGK-FHVFDMRTQH 245 (357)
T ss_dssp EEEEEECCCC-CCCEEEE-EETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTE-EEEEEEEEEE
T ss_pred EEEEEEeccCCCCCEEEE-EccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCe-EEEEeCcCCC
Confidence 333321 4556688884 8999999999999888777788999999999999 9999999999999 9999998876
Q ss_pred EE
Q 022387 293 LL 294 (298)
Q Consensus 293 ~l 294 (298)
.+
T Consensus 246 ~~ 247 (357)
T 3i2n_A 246 PT 247 (357)
T ss_dssp TT
T ss_pred cc
Confidence 54
No 85
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.92 E-value=8.8e-23 Score=188.98 Aligned_cols=195 Identities=12% Similarity=0.226 Sum_probs=156.3
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEE
Q 022387 83 SPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIW 161 (298)
Q Consensus 83 ~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iW 161 (298)
.|...|.+++| ||++|++|+.++ +++||+.+.+....... |.+.+..+ .++++.+++++ .|++|++|
T Consensus 131 ~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~l--~~~~~~l~sg~-------~dg~i~vw 198 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTG-HTGSVLCL--QYDERVIITGS-------SDSTVRVW 198 (435)
T ss_dssp SSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECC-CSSCEEEE--ECCSSEEEEEE-------TTSCEEEE
T ss_pred CCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcC-CCCcEEEE--EECCCEEEEEc-------CCCeEEEE
Confidence 45567988877 899999999865 88999998887665543 45555544 45788888877 68999999
Q ss_pred eCCCCcEEEEeecC-CceEEEEEeCCeEEEEE-CCeEEEEEcCCCeEE---EEEeccCCCcceEEEEeCCCCeEEEEecC
Q 022387 162 DDHQSRCIGELSFR-SEVRSVKLRRDRIIVVL-EQKIFVYNFADLKLL---HQIETIANPKGLCAVSQGVGSLVLVCPGL 236 (298)
Q Consensus 162 D~~~~~~~~~~~~~-~~v~~v~~~~~~l~v~~-~~~I~iwd~~~~~~i---~~~~~~~~~~~~~~~s~~~d~~~la~sGs 236 (298)
|+.+++.+..+..+ ..|.++.++++.++++. ++.|++||+.+.+.+ ..+..|...+..+++ ++ .+++ +|+
T Consensus 199 d~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~--~~l~-s~~ 273 (435)
T 1p22_A 199 DVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DD--KYIV-SAS 273 (435)
T ss_dssp ESSSCCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ET--TEEE-EEE
T ss_pred ECCCCcEEEEEcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CC--CEEE-EEe
Confidence 99999998888754 58999999998888776 489999999876654 555666665555554 33 6676 489
Q ss_pred CCceEEEEEcCCcc-eEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 237 QKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 237 ~dg~v~i~~~~~~~-~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
.||.|++||..+.. +..+.+|...|.+++| ++.+|++|+.||+ |+|||++++++++++
T Consensus 274 ~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~-i~iwd~~~~~~~~~~ 332 (435)
T 1p22_A 274 GDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNT-IRLWDIECGACLRVL 332 (435)
T ss_dssp TTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSC-EEEEETTTCCEEEEE
T ss_pred CCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCe-EEEEECCCCCEEEEE
Confidence 99999999998765 4588999999999999 5789999999999 999999999998765
No 86
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.92 E-value=6.9e-23 Score=195.88 Aligned_cols=203 Identities=14% Similarity=0.137 Sum_probs=159.3
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCeEEEEEcCCC----ceEEEEeeecCCc-eEEEEEec--CCCEEEEEeCCCCCCCCC
Q 022387 83 SPPPTLLHISFNQDHGCFAAGTDHGFRIYNCDPF----REIFRRDFERGGG-IGVVEMLF--RCNILALVGGGPDPQYPL 155 (298)
Q Consensus 83 ~~~~~V~~v~fs~dg~~lasgs~~gi~vw~~~~~----~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~d 155 (298)
.|+..|.+++|+|||++||+|+++.++||++++. +....... |... +..+.+++ ++..+++++ .|
T Consensus 16 ~~~~~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~-h~~~~v~~~~~sp~~~~~~l~s~~-------~d 87 (615)
T 1pgu_A 16 TQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTG-HGSSVVTTVKFSPIKGSQYLCSGD-------ES 87 (615)
T ss_dssp CCTTCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECT-TTTSCEEEEEECSSTTCCEEEEEE-------TT
T ss_pred CccCceeEEEECCCCCEEEEecCCeEEEEECCCCCCccccceEEec-CCCceEEEEEECcCCCCCEEEEec-------CC
Confidence 4567899999999999999999888999999977 65555543 6777 99999999 889888887 68
Q ss_pred CeEEEEeCCCC--------cEEEEee-cCCce--------------------------------------------EEEE
Q 022387 156 NKVMIWDDHQS--------RCIGELS-FRSEV--------------------------------------------RSVK 182 (298)
Q Consensus 156 ~~v~iWD~~~~--------~~~~~~~-~~~~v--------------------------------------------~~v~ 182 (298)
++|++||+.++ +.+..+. +...| .++.
T Consensus 88 g~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~v~~~~ 167 (615)
T 1pgu_A 88 GKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACH 167 (615)
T ss_dssp SEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEE
T ss_pred CEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCCcceeeecCCccEEEEE
Confidence 99999999744 3343333 12234 4444
Q ss_pred EeCC---eEEEEE-CCeEEEEEcCCCeEEEEEeccCC---CcceEEEEeCCCCeEEEEecCCCceEEEEEcCCcce-Eee
Q 022387 183 LRRD---RIIVVL-EQKIFVYNFADLKLLHQIETIAN---PKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRT-KFI 254 (298)
Q Consensus 183 ~~~~---~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~---~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~~~-~~~ 254 (298)
|+++ .++++. ++.|++||+.+.+.+.++..|.. .+..++++++. +.++++ |+.||.|++|++..... ..+
T Consensus 168 ~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~-~~~dg~i~vwd~~~~~~~~~~ 245 (615)
T 1pgu_A 168 LKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDS-GEFVIT-VGSDRKISCFDGKSGEFLKYI 245 (615)
T ss_dssp ECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTT-CCEEEE-EETTCCEEEEETTTCCEEEEC
T ss_pred ECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCC-CCEEEE-EeCCCeEEEEECCCCCEeEEe
Confidence 4443 244443 48999999999999999998877 66666665540 477774 89999999999887654 466
Q ss_pred -c---ccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 255 -M---AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 255 -~---~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
. .|...|++++|+ ++++|++++.|++ |+|||+++++++.++
T Consensus 246 ~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~-i~~wd~~~~~~~~~~ 290 (615)
T 1pgu_A 246 EDDQEPVQGGIFALSWL-DSQKFATVGADAT-IRVWDVTTSKCVQKW 290 (615)
T ss_dssp CBTTBCCCSCEEEEEES-SSSEEEEEETTSE-EEEEETTTTEEEEEE
T ss_pred cccccccCCceEEEEEc-CCCEEEEEcCCCc-EEEEECCCCcEEEEE
Confidence 5 899999999999 9999999999999 999999999988764
No 87
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.92 E-value=2.9e-23 Score=186.36 Aligned_cols=200 Identities=11% Similarity=0.042 Sum_probs=158.4
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceE---EEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCe
Q 022387 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREI---FRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 157 (298)
..|...|.+++|+|++++|++|+.++ +++|+++..... ......|...+..+.+.+++..+++++ .|+.
T Consensus 93 ~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-------~dg~ 165 (372)
T 1k8k_C 93 LRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGS-------CDFK 165 (372)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEE-------TTSC
T ss_pred ecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEc-------CCCC
Confidence 45677999999999999999999865 889999876631 122111467788888988888888877 6799
Q ss_pred EEEEeCC------------------CCcEEEEeec-CCceEEEEEeCC--eEEEEE-CCeEEEEEcCCCeEEEEEeccCC
Q 022387 158 VMIWDDH------------------QSRCIGELSF-RSEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIETIAN 215 (298)
Q Consensus 158 v~iWD~~------------------~~~~~~~~~~-~~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~ 215 (298)
|++||++ .++.+..+.. ...|.++.|+++ .++++. ++.|++||+++++++.++..|..
T Consensus 166 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~ 245 (372)
T 1k8k_C 166 CRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETL 245 (372)
T ss_dssp EEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSC
T ss_pred EEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCC
Confidence 9999954 5677777754 457999999875 455554 58999999999999999998887
Q ss_pred CcceEEEEeCCCCeEEEEecCCCceEEEEEcCC--cce---------------------------------------Eee
Q 022387 216 PKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYAS--KRT---------------------------------------KFI 254 (298)
Q Consensus 216 ~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~--~~~---------------------------------------~~~ 254 (298)
++..+++++++ .++++ | .||.|++|+... +.. ..+
T Consensus 246 ~v~~~~~~~~~--~~l~~-~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (372)
T 1k8k_C 246 PLLAVTFITES--SLVAA-G-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGL 321 (372)
T ss_dssp CEEEEEEEETT--EEEEE-E-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCC
T ss_pred CeEEEEEecCC--CEEEE-E-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccc
Confidence 87777877654 77774 5 899999999876 210 223
Q ss_pred -cccccceeEEEEC-CCC---CEEEEEeCCCCEEEEEECCCCcE
Q 022387 255 -MAHDSRIACFALT-QDG---QLLATSSTKGTLVRIFNTLDGTL 293 (298)
Q Consensus 255 -~~H~~~V~~l~fs-pdg---~~lAt~S~Dgt~IrIWd~~tg~~ 293 (298)
.+|...|++|+|+ ++| ++|||||.||+ |+|||+++++.
T Consensus 322 ~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~-i~~W~~~~~~~ 364 (372)
T 1k8k_C 322 DSLHKNSVSQISVLSGGKAKCSQFCTTGMDGG-MSIWDVRSLES 364 (372)
T ss_dssp SSSSSSCEEEEEEEESTTTSCSEEEEEETTSE-EEEEEHHHHHH
T ss_pred cccccCCcceeEEecCCCcceeeEEEecCCCc-eEEEEecChhH
Confidence 4899999999966 777 99999999999 99999987654
No 88
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.92 E-value=1.1e-22 Score=189.11 Aligned_cols=199 Identities=17% Similarity=0.243 Sum_probs=154.5
Q ss_pred CCCCCC-eEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEE
Q 022387 82 SSPPPT-LLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (298)
Q Consensus 82 ~~~~~~-V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~ 159 (298)
..|... +.++.| ++++|++|+.+| |++||+.+.+.+..... |.+.+..+.+..+. .+++++ .|++|+
T Consensus 118 ~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~-h~~~V~~l~~~~~~-~l~s~s-------~dg~i~ 186 (464)
T 3v7d_B 118 RGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSG-HDGGVWALKYAHGG-ILVSGS-------TDRTVR 186 (464)
T ss_dssp ECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECSTT-EEEEEE-------TTSCEE
T ss_pred cCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeC-CCcCEEEEEEcCCC-EEEEEe-------CCCCEE
Confidence 455555 566666 577999999865 89999999887666553 67788888887655 666666 689999
Q ss_pred EEeCCCCcEEEEeec-CCceEEEEEeC--C--eEEEEE-CCeEEEEEcCCCeE-----------------------EEEE
Q 022387 160 IWDDHQSRCIGELSF-RSEVRSVKLRR--D--RIIVVL-EQKIFVYNFADLKL-----------------------LHQI 210 (298)
Q Consensus 160 iWD~~~~~~~~~~~~-~~~v~~v~~~~--~--~l~v~~-~~~I~iwd~~~~~~-----------------------i~~~ 210 (298)
+||+++++.+..+.. ...|.++.+++ + .++++. ++.|++||+.+.+. +..+
T Consensus 187 vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (464)
T 3v7d_B 187 VWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVL 266 (464)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEE
T ss_pred EEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEc
Confidence 999999999888874 46899998873 3 344444 58999999977653 3344
Q ss_pred eccCCCcceEEEEeCCCCeEEEEecCCCceEEEEEcCCcc-eEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECC
Q 022387 211 ETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTL 289 (298)
Q Consensus 211 ~~~~~~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~~-~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~ 289 (298)
..|.. .+.++++++ .+++ +|+.||.|++||+.... +..+.+|...|++++|+|+|++|++|+.||+ |+|||++
T Consensus 267 ~~~~~--~v~~~~~~~--~~l~-~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~-i~vwd~~ 340 (464)
T 3v7d_B 267 RGHMA--SVRTVSGHG--NIVV-SGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTT-IRIWDLE 340 (464)
T ss_dssp CCCSS--CEEEEEEET--TEEE-EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSC-EEEEETT
T ss_pred cCccc--eEEEEcCCC--CEEE-EEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCc-EEEEECC
Confidence 44433 344555554 6777 48999999999998765 4578899999999999999999999999999 9999999
Q ss_pred CCcEEEec
Q 022387 290 DGTLLQEG 297 (298)
Q Consensus 290 tg~~l~~~ 297 (298)
++++++++
T Consensus 341 ~~~~~~~~ 348 (464)
T 3v7d_B 341 NGELMYTL 348 (464)
T ss_dssp TTEEEEEE
T ss_pred CCcEEEEE
Confidence 99998775
No 89
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.92 E-value=5.2e-23 Score=188.33 Aligned_cols=197 Identities=11% Similarity=0.097 Sum_probs=154.7
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEE
Q 022387 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i 160 (298)
..|...|++++|+|++++|++|+.++ +++|++.+.+....... |...+..+.+.+++..+++++ .|++|++
T Consensus 136 ~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~-------~d~~v~i 207 (420)
T 3vl1_A 136 QAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIG-HRATVTDIAIIDRGRNVLSAS-------LDGTIRL 207 (420)
T ss_dssp TSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEEC-CSSCEEEEEEETTTTEEEEEE-------TTSCEEE
T ss_pred ccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcC-CCCcEEEEEEcCCCCEEEEEc-------CCCcEEE
Confidence 57888999999999999999999865 88999998876655543 678899999999999888877 6899999
Q ss_pred EeCCCCcEEEEeecC----CceEEEEE---------------------eCC--eEEEEE-CCeEEEEEcCCCeEEEEEec
Q 022387 161 WDDHQSRCIGELSFR----SEVRSVKL---------------------RRD--RIIVVL-EQKIFVYNFADLKLLHQIET 212 (298)
Q Consensus 161 WD~~~~~~~~~~~~~----~~v~~v~~---------------------~~~--~l~v~~-~~~I~iwd~~~~~~i~~~~~ 212 (298)
||+++++.+..+..+ ..+.++.+ +++ .++++. ++.|++||+++.+.+..+..
T Consensus 208 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 287 (420)
T 3vl1_A 208 WECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPS 287 (420)
T ss_dssp EETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred eECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEccc
Confidence 999999988887642 34555554 343 444444 57999999999888877754
Q ss_pred -cCCCcceEEEEeCCCCe-EEEEecCCCceEEEEEcCCcc--eEeecc-cccceeEEEECCCCCEEEEEeCCCCEEEEEE
Q 022387 213 -IANPKGLCAVSQGVGSL-VLVCPGLQKGQVRVEHYASKR--TKFIMA-HDSRIACFALTQDGQLLATSSTKGTLVRIFN 287 (298)
Q Consensus 213 -~~~~~~~~~~s~~~d~~-~la~sGs~dg~v~i~~~~~~~--~~~~~~-H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd 287 (298)
|...+..+++++ ++. +|+ +|+.||.|++|++.... +..+.. |...|+++.| +++++||+++.|++ |+|||
T Consensus 288 ~~~~~v~~~~~~~--~~~~~l~-~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~-v~iw~ 362 (420)
T 3vl1_A 288 KFTCSCNSLTVDG--NNANYIY-AGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTS-IKLDI 362 (420)
T ss_dssp TTSSCEEEEEECS--SCTTEEE-EEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEE-EEEEE
T ss_pred ccCCCceeEEEeC--CCCCEEE-EEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCcc-EEEEe
Confidence 445555555554 445 666 48999999999998653 456766 6778888865 57899999999999 99999
Q ss_pred CCCC
Q 022387 288 TLDG 291 (298)
Q Consensus 288 ~~tg 291 (298)
+.+.
T Consensus 363 ~~~~ 366 (420)
T 3vl1_A 363 ISDP 366 (420)
T ss_dssp ECCT
T ss_pred ccCC
Confidence 8874
No 90
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.92 E-value=1.6e-22 Score=187.41 Aligned_cols=196 Identities=16% Similarity=0.233 Sum_probs=159.5
Q ss_pred CCCCCCe-EEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEE
Q 022387 82 SSPPPTL-LHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (298)
Q Consensus 82 ~~~~~~V-~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~ 159 (298)
..|...| .+ ++++|++|++|+.+| +++|++.+.+.+..... |.+.+..+.+ +++.+++++ .|++|+
T Consensus 115 ~~h~~~v~~~--~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~--~~~~l~s~~-------~dg~i~ 182 (445)
T 2ovr_B 115 KGHDDHVITC--LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVG-HTGGVWSSQM--RDNIIISGS-------TDRTLK 182 (445)
T ss_dssp ECSTTSCEEE--EEEETTEEEEEETTSCEEEEETTTCCEEEECCC-CSSCEEEEEE--ETTEEEEEE-------TTSCEE
T ss_pred cccCCCcEEE--EEEcCCEEEEEECCCcEEEEECCCCcEEEEEcC-CCCCEEEEEe--cCCEEEEEe-------CCCeEE
Confidence 4565554 54 555789999999866 88999998887655543 5666655555 467777777 689999
Q ss_pred EEeCCCCcEEEEeecC-CceEEEEEeCCeEEEEE-CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEecCC
Q 022387 160 IWDDHQSRCIGELSFR-SEVRSVKLRRDRIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQ 237 (298)
Q Consensus 160 iWD~~~~~~~~~~~~~-~~v~~v~~~~~~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs~ 237 (298)
+||+.+++.+..+..+ ..|.++.++++.++++. ++.|++||+.+++.+..+..|...+.++++ + +.+++ +|+.
T Consensus 183 vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~--~~~l~-~~~~ 257 (445)
T 2ovr_B 183 VWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--D--GRRVV-SGAY 257 (445)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--C--SSCEE-EEET
T ss_pred EEECCcCcEEEEECCCCCcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--C--CCEEE-EEcC
Confidence 9999999988888754 58999999999888877 589999999999999999988777666655 3 35666 4899
Q ss_pred CceEEEEEcCCcc-eEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 238 KGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 238 dg~v~i~~~~~~~-~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
||.|++|+..... +..+.+|...|.+++| ++.+|++++.||+ |+|||++++++++++
T Consensus 258 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~-i~i~d~~~~~~~~~~ 315 (445)
T 2ovr_B 258 DFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTS-IRVWDVETGNCIHTL 315 (445)
T ss_dssp TSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSC-EEEEETTTCCEEEEE
T ss_pred CCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCe-EEEEECCCCCEEEEE
Confidence 9999999987654 4588899999999999 8999999999999 999999999988765
No 91
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.92 E-value=1.1e-22 Score=210.55 Aligned_cols=205 Identities=12% Similarity=0.166 Sum_probs=170.9
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEE
Q 022387 81 SSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (298)
Q Consensus 81 ~~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~ 159 (298)
...|...|++++|+|||++||+|+.++ |+||+..+.+.+..... |.+.+..+.+++++..+++++ .|++|+
T Consensus 611 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~~-------~d~~v~ 682 (1249)
T 3sfz_A 611 VRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKA-HEDEVLCCAFSSDDSYIATCS-------ADKKVK 682 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEE-------TTSEEE
T ss_pred EecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEecc-CCCCEEEEEEecCCCEEEEEe-------CCCeEE
Confidence 357888999999999999999999866 88999999887666654 688899999999999998887 679999
Q ss_pred EEeCCCCcEEEEeecC-CceEEEEEeC--C--eEEEEE-CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEE
Q 022387 160 IWDDHQSRCIGELSFR-SEVRSVKLRR--D--RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVC 233 (298)
Q Consensus 160 iWD~~~~~~~~~~~~~-~~v~~v~~~~--~--~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~ 233 (298)
|||+.+++.+..+..+ ..|.++.|++ + .++++. ++.|++||+.+++++.++..|...+..++++++ +.+++
T Consensus 683 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~--~~~l~- 759 (1249)
T 3sfz_A 683 IWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPD--DELLA- 759 (1249)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSS--TTEEE-
T ss_pred EEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecC--CCEEE-
Confidence 9999999998888755 5899999986 3 333444 479999999999999999998887777777665 47777
Q ss_pred ecCCCceEEEEEcCCcceE--------------------------------------------------------eeccc
Q 022387 234 PGLQKGQVRVEHYASKRTK--------------------------------------------------------FIMAH 257 (298)
Q Consensus 234 sGs~dg~v~i~~~~~~~~~--------------------------------------------------------~~~~H 257 (298)
+|+.||.|++|++...... ...+|
T Consensus 760 s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~ 839 (1249)
T 3sfz_A 760 SCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGH 839 (1249)
T ss_dssp EEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSS
T ss_pred EEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCC
Confidence 4899999999997643210 11278
Q ss_pred ccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 258 DSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 258 ~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
...|++++|+|+++++++++.||+ |+|||+.+++++.++
T Consensus 840 ~~~v~~~~~sp~~~~l~~~~~dg~-v~vwd~~~~~~~~~~ 878 (1249)
T 3sfz_A 840 HSTIQYCDFSPYDHLAVIALSQYC-VELWNIDSRLKVADC 878 (1249)
T ss_dssp SSCCCEEEECSSTTEEEEECSSSC-EEEEETTTTEEEEEE
T ss_pred CCceEEEEEcCCCCEEEEEeCCCe-EEEEEcCCCceeeec
Confidence 889999999999999999999999 999999999887654
No 92
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.92 E-value=9e-23 Score=185.74 Aligned_cols=203 Identities=17% Similarity=0.207 Sum_probs=157.3
Q ss_pred CCCCCCeEEEEEcCCCC-EEEEEcCCe-EEEEEc----CCCc------eEEEEeee---------cCCceEEEEEecCCC
Q 022387 82 SSPPPTLLHISFNQDHG-CFAAGTDHG-FRIYNC----DPFR------EIFRRDFE---------RGGGIGVVEMLFRCN 140 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg~-~lasgs~~g-i~vw~~----~~~~------~~~~~~~~---------~~~~~~~~~~~~~~~ 140 (298)
+.|...|++++|+|+|+ +||+|+.++ ++||++ .+.+ ........ |.+.+..+.+.+++.
T Consensus 42 ~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 121 (425)
T 1r5m_A 42 IVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGN 121 (425)
T ss_dssp EEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSS
T ss_pred eeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCC
Confidence 45567999999999999 999999855 889999 7766 22222210 244788899999898
Q ss_pred EEEEEeCCCCCCCCCCeEEEEeCCCCcEEEEeec-CCceEEEEEeCC--eEEEEE-CCeEEEEEcCCCeEEEEEeccCCC
Q 022387 141 ILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSF-RSEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIETIANP 216 (298)
Q Consensus 141 ~~~~~~~~~~~~~~d~~v~iWD~~~~~~~~~~~~-~~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~ 216 (298)
.+++++ .|+.|++|| .+++.+..+.. ...|.++.|+++ .++++. ++.|++||+.+++.+..+..+...
T Consensus 122 ~l~~~~-------~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 193 (425)
T 1r5m_A 122 SIVTGV-------ENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETG 193 (425)
T ss_dssp EEEEEE-------TTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---
T ss_pred EEEEEe-------CCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccC
Confidence 888887 679999999 56667766664 468999999875 455554 589999999999999988877665
Q ss_pred ---------------cceEEEEeCCCCeEEEEecCCCceEEEEEcCCcc-eEeecccccceeEEEECCCCCEEEEEeCCC
Q 022387 217 ---------------KGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKG 280 (298)
Q Consensus 217 ---------------~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~~-~~~~~~H~~~V~~l~fspdg~~lAt~S~Dg 280 (298)
+..++++++ +.+++ |+.+|.|++|+..... ...+..|...|++++|+|++++|++++.|+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~ 269 (425)
T 1r5m_A 194 GSSINAENHSGDGSLGVDVEWVDD--DKFVI--PGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDG 269 (425)
T ss_dssp ------------CCCBSCCEEEET--TEEEE--ECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTS
T ss_pred ccceeeccccCCcceeeEEEEcCC--CEEEE--EcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCC
Confidence 666677665 35443 7999999999998754 457889999999999999999999999999
Q ss_pred CEEEEEECCCCcEEEec
Q 022387 281 TLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 281 t~IrIWd~~tg~~l~~~ 297 (298)
. |+|||+++++++.++
T Consensus 270 ~-i~i~d~~~~~~~~~~ 285 (425)
T 1r5m_A 270 T-LRIWHGGNGNSQNCF 285 (425)
T ss_dssp C-EEEECSSSBSCSEEE
T ss_pred E-EEEEECCCCccceEe
Confidence 9 999999998876654
No 93
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.91 E-value=3.9e-23 Score=204.73 Aligned_cols=203 Identities=17% Similarity=0.182 Sum_probs=155.8
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeee-cCCceEEEEEecC--CCEEEEEeCCCCCCCCCC
Q 022387 81 SSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFE-RGGGIGVVEMLFR--CNILALVGGGPDPQYPLN 156 (298)
Q Consensus 81 ~~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~ 156 (298)
...|.+.|++++|+|+|++|++|+.+| |+||++..........+. |.+.+..+.+.++ ++.+++++ .|+
T Consensus 5 l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s-------~Dg 77 (753)
T 3jro_A 5 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCS-------YDG 77 (753)
T ss_dssp ---CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEE-------TTS
T ss_pred cccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEe-------CCC
Confidence 467888999999999999999998765 889999854433333332 6778888888877 77888877 689
Q ss_pred eEEEEeCCCCc--EEEEee-cCCceEEEEEeCC----eEEEEE-CCeEEEEEcCCCe--EEEEEeccCCCcceEEEEeCC
Q 022387 157 KVMIWDDHQSR--CIGELS-FRSEVRSVKLRRD----RIIVVL-EQKIFVYNFADLK--LLHQIETIANPKGLCAVSQGV 226 (298)
Q Consensus 157 ~v~iWD~~~~~--~~~~~~-~~~~v~~v~~~~~----~l~v~~-~~~I~iwd~~~~~--~i~~~~~~~~~~~~~~~s~~~ 226 (298)
+|++||+.+++ .+..+. +...|.++.|+++ .++++. ++.|++||+++.. ....+..|...+..+++++..
T Consensus 78 ~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~ 157 (753)
T 3jro_A 78 KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 157 (753)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC
T ss_pred eEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcc
Confidence 99999999886 444444 4468999999865 455555 5899999997763 334555666666666665531
Q ss_pred -----------CCeEEEEecCCCceEEEEEcCCcc-----eEeecccccceeEEEECCC---CCEEEEEeCCCCEEEEEE
Q 022387 227 -----------GSLVLVCPGLQKGQVRVEHYASKR-----TKFIMAHDSRIACFALTQD---GQLLATSSTKGTLVRIFN 287 (298)
Q Consensus 227 -----------d~~~la~sGs~dg~v~i~~~~~~~-----~~~~~~H~~~V~~l~fspd---g~~lAt~S~Dgt~IrIWd 287 (298)
++.+++ +|+.||.|++|+..... ...+.+|...|++|+|+|+ |++||+|+.||+ |+|||
T Consensus 158 ~~~~~~~~~~~d~~~l~-sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~-I~iwd 235 (753)
T 3jro_A 158 IEEDGEHNGTKESRKFV-TGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRT-CIIWT 235 (753)
T ss_dssp ---------CGGGCCEE-EEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSC-EEEEE
T ss_pred cccccccccCCCCCEEE-EEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCE-EEEec
Confidence 356777 48999999999987642 3478899999999999999 999999999999 99999
Q ss_pred CCCCc
Q 022387 288 TLDGT 292 (298)
Q Consensus 288 ~~tg~ 292 (298)
+.+++
T Consensus 236 ~~~~~ 240 (753)
T 3jro_A 236 QDNEQ 240 (753)
T ss_dssp ESSSS
T ss_pred CCCCC
Confidence 99874
No 94
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.91 E-value=3.8e-23 Score=183.78 Aligned_cols=195 Identities=12% Similarity=0.029 Sum_probs=151.7
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCc----eEEEEeeecCCceEEEEEecCCC-EEEEEeCCCCCCCC
Q 022387 81 SSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFR----EIFRRDFERGGGIGVVEMLFRCN-ILALVGGGPDPQYP 154 (298)
Q Consensus 81 ~~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 154 (298)
...|...|++++|+|+|++|++|+.++ ++||+++..+ ..... .|...+..+.+.+++. .+++++ .
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~-------~ 77 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSL--RYKHPLLCCNFIDNTDLQIYVGT-------V 77 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEE--ECSSCEEEEEEEESSSEEEEEEE-------T
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeee--ecCCceEEEEECCCCCcEEEEEc-------C
Confidence 346788999999999999999998755 8899998876 32222 2688899999998888 888877 6
Q ss_pred CCeEEEEeC-CCCcEEEEee--cCCceEEEEEeC-CeEEEEE-CCeEEEEEcCC---------CeEEEEEeccCCCcceE
Q 022387 155 LNKVMIWDD-HQSRCIGELS--FRSEVRSVKLRR-DRIIVVL-EQKIFVYNFAD---------LKLLHQIETIANPKGLC 220 (298)
Q Consensus 155 d~~v~iWD~-~~~~~~~~~~--~~~~v~~v~~~~-~~l~v~~-~~~I~iwd~~~---------~~~i~~~~~~~~~~~~~ 220 (298)
|+.|++||+ .+++...... +...|.++.|++ +.++++. ++.|++||+++ .+++.++. +...+..+
T Consensus 78 dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~ 156 (342)
T 1yfq_A 78 QGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTM 156 (342)
T ss_dssp TSCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEE
T ss_pred CCeEEEEEeccCCceEeccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEE
Confidence 799999999 8877643334 556899999985 4555554 58999999987 66555555 44444444
Q ss_pred EEEeCCCCeEEEEecCCCceEEEEEcCC-cc--e-EeecccccceeEEEECC-CCCEEEEEeCCCCEEEEEECCCC
Q 022387 221 AVSQGVGSLVLVCPGLQKGQVRVEHYAS-KR--T-KFIMAHDSRIACFALTQ-DGQLLATSSTKGTLVRIFNTLDG 291 (298)
Q Consensus 221 ~~s~~~d~~~la~sGs~dg~v~i~~~~~-~~--~-~~~~~H~~~V~~l~fsp-dg~~lAt~S~Dgt~IrIWd~~tg 291 (298)
+ +++++ ++ +|+.+|.|++|++.. .. . .....|...|++++|+| ++++||+++.||. |+||+++.+
T Consensus 157 ~--~~~~~--l~-~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~-i~i~~~~~~ 226 (342)
T 1yfq_A 157 D--TNSSR--LI-VGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGR-VAVEFFDDQ 226 (342)
T ss_dssp E--ECSSE--EE-EEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSE-EEEEECCTT
T ss_pred E--ecCCc--EE-EEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCc-EEEEEEcCC
Confidence 4 44544 44 389999999999987 33 2 24567889999999999 9999999999999 999999876
No 95
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.91 E-value=4.5e-23 Score=184.20 Aligned_cols=197 Identities=9% Similarity=0.045 Sum_probs=146.7
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEE--ecCCCEEEEEeCCCCCCCCCCeE
Q 022387 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEM--LFRCNILALVGGGPDPQYPLNKV 158 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~v 158 (298)
..|...|++++|+|++++|++|+.++ +++|++.+.+...... |...+..+.+ ..++..+++++ .|++|
T Consensus 83 ~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~-------~dg~i 153 (368)
T 3mmy_A 83 QMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQ--HDAPVKTIHWIKAPNYSCVMTGS-------WDKTL 153 (368)
T ss_dssp EECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE--CSSCEEEEEEEECSSCEEEEEEE-------TTSEE
T ss_pred ccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeecc--ccCceEEEEEEeCCCCCEEEEcc-------CCCcE
Confidence 45778999999999999999999866 8899999887655444 6888999998 55666677766 67999
Q ss_pred EEEeCCCCcEEEEeecCCceEEEEEeCC------------------------------------------------eEEE
Q 022387 159 MIWDDHQSRCIGELSFRSEVRSVKLRRD------------------------------------------------RIIV 190 (298)
Q Consensus 159 ~iWD~~~~~~~~~~~~~~~v~~v~~~~~------------------------------------------------~l~v 190 (298)
++||+++++.+..+..+..+.++.+... .+++
T Consensus 154 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (368)
T 3mmy_A 154 KFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFAL 233 (368)
T ss_dssp EEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEE
T ss_pred EEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEE
Confidence 9999999887776665544443333221 1444
Q ss_pred EE-CCeEEEEEcCCC---eEEEEEeccCCCc----------ceEEEEeCCCCeEEEEecCCCceEEEEEcCCcc-eEeec
Q 022387 191 VL-EQKIFVYNFADL---KLLHQIETIANPK----------GLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-TKFIM 255 (298)
Q Consensus 191 ~~-~~~I~iwd~~~~---~~i~~~~~~~~~~----------~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~~-~~~~~ 255 (298)
+. ++.|++||+... +.+..+..|.... .+.++.+++++.+|+ +|+.||.|++|++.... +..+.
T Consensus 234 ~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~ 312 (368)
T 3mmy_A 234 GSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLA-TVGSDGRFSFWDKDARTKLKTSE 312 (368)
T ss_dssp EETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEE-EEETTSCEEEEETTTTEEEEECC
T ss_pred ecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEE-EEccCCeEEEEECCCCcEEEEec
Confidence 44 478888888765 4556666654310 234445555667887 48999999999998764 55889
Q ss_pred ccccceeEEEECCCCCEEEEEeCCCCEEEEEECC
Q 022387 256 AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTL 289 (298)
Q Consensus 256 ~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~ 289 (298)
+|...|++|+|+|+|++||++|.|+. .+.|++.
T Consensus 313 ~~~~~v~~~~~s~~g~~l~~~s~d~~-~~~~~~~ 345 (368)
T 3mmy_A 313 QLDQPISACCFNHNGNIFAYASSYDW-SKGHEFY 345 (368)
T ss_dssp CCSSCEEEEEECTTSSCEEEEECCCS-TTCGGGC
T ss_pred CCCCCceEEEECCCCCeEEEEecccc-ccccccc
Confidence 99999999999999999999999985 5555543
No 96
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.91 E-value=3.8e-22 Score=174.66 Aligned_cols=195 Identities=13% Similarity=0.145 Sum_probs=151.8
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEec-CCCEEEEEeCCCCCCCCCCeEE
Q 022387 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLF-RCNILALVGGGPDPQYPLNKVM 159 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~v~ 159 (298)
..|...|.+++| ++++|++|+.++ +++|+ ..+....... |...+..+.+.+ +++.+++++ .|+.|+
T Consensus 101 ~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~-------~d~~i~ 168 (313)
T 3odt_A 101 IGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQA-HNASVWDAKVVSFSENKFLTAS-------ADKTIK 168 (313)
T ss_dssp CCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEEC-CSSCEEEEEEEETTTTEEEEEE-------TTSCEE
T ss_pred hhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEeccc-CCCceeEEEEccCCCCEEEEEE-------CCCCEE
Confidence 567789999999 678999998865 78999 4444444433 577787777765 788888877 679999
Q ss_pred EEeCCCCcEEEEee--cCCceEEEEEeCCeEE-EEE-CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEec
Q 022387 160 IWDDHQSRCIGELS--FRSEVRSVKLRRDRII-VVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPG 235 (298)
Q Consensus 160 iWD~~~~~~~~~~~--~~~~v~~v~~~~~~l~-v~~-~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sG 235 (298)
+|| .++....+. +...+.++.++++..+ ++. ++.|++||+++++.+.++..|...+..+++++++ . ++ +|
T Consensus 169 i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~--~-l~-~~ 242 (313)
T 3odt_A 169 LWQ--NDKVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG--D-IV-SC 242 (313)
T ss_dssp EEE--TTEEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS--C-EE-EE
T ss_pred EEe--cCceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC--C-EE-EE
Confidence 999 344455554 4568999999876443 333 5899999999999999999888777777766654 4 44 48
Q ss_pred CCCceEEEEEcCCcc-eEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEe
Q 022387 236 LQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQE 296 (298)
Q Consensus 236 s~dg~v~i~~~~~~~-~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~ 296 (298)
+.||.|++|++.... ...+..|...|++++|+|+|+ |++++.||. |+|||+++++.+.+
T Consensus 243 ~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~-i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 243 GEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNL-VRIFSQEKSRWASE 302 (313)
T ss_dssp ETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSC-EEEEESCGGGCCC-
T ss_pred ecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCc-EEEEeCCCCceeeh
Confidence 999999999987765 457889999999999999998 566889999 99999999876543
No 97
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.91 E-value=1.7e-22 Score=187.08 Aligned_cols=191 Identities=12% Similarity=0.262 Sum_probs=154.6
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEE
Q 022387 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i 160 (298)
..|...|.+++| ++++|++|+.+| +++||+.+.+.+..... |...+.. +.++++.+++++ .|++|++
T Consensus 170 ~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~--l~~~~~~l~s~s-------~dg~i~v 237 (435)
T 1p22_A 170 TGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIH-HCEAVLH--LRFNNGMMVTCS-------KDRSIAV 237 (435)
T ss_dssp CCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECC-CCSCEEE--EECCTTEEEEEE-------TTSCEEE
T ss_pred cCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcC-CCCcEEE--EEEcCCEEEEee-------CCCcEEE
Confidence 568889999999 789999999866 88999999887655543 4444444 445677777777 6899999
Q ss_pred EeCCCCcEE---EEee-cCCceEEEEEeCCeEEEEE-CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEec
Q 022387 161 WDDHQSRCI---GELS-FRSEVRSVKLRRDRIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPG 235 (298)
Q Consensus 161 WD~~~~~~~---~~~~-~~~~v~~v~~~~~~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sG 235 (298)
||+.++..+ ..+. +...|.++.++.+.++++. ++.|++||+++++.+.++..|...+.++++ ++ .+++ +|
T Consensus 238 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~--~~l~-~g 312 (435)
T 1p22_A 238 WDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RD--RLVV-SG 312 (435)
T ss_dssp EECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ET--TEEE-EE
T ss_pred EeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CC--CEEE-EE
Confidence 999987654 3333 4458999999888888877 589999999999999999988777665555 33 5666 48
Q ss_pred CCCceEEEEEcCCcc-eEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCc
Q 022387 236 LQKGQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGT 292 (298)
Q Consensus 236 s~dg~v~i~~~~~~~-~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~ 292 (298)
+.||.|++||..+.. +.++.+|...|++++| ++.+||+|+.||+ |+|||+.+++
T Consensus 313 ~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~-i~vwd~~~~~ 367 (435)
T 1p22_A 313 SSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGK-IKVWDLVAAL 367 (435)
T ss_dssp ETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSC-EEEEEHHHHT
T ss_pred eCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCc-EEEEECCCCC
Confidence 999999999998654 5589999999999999 7899999999999 9999998766
No 98
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1.7e-23 Score=199.21 Aligned_cols=204 Identities=8% Similarity=-0.024 Sum_probs=149.4
Q ss_pred CCCCeEEEEEcCCC---------CEEEEEc-------------------CCe-EEEEEcCCCceEEE--Eeee-cCCceE
Q 022387 84 PPPTLLHISFNQDH---------GCFAAGT-------------------DHG-FRIYNCDPFREIFR--RDFE-RGGGIG 131 (298)
Q Consensus 84 ~~~~V~~v~fs~dg---------~~lasgs-------------------~~g-i~vw~~~~~~~~~~--~~~~-~~~~~~ 131 (298)
....|.+|+|+|++ ++||+|+ .|+ |+||++++.+.... ..+. |.+.+.
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~ 211 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVW 211 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEE
Confidence 45689999999986 6777754 344 78999987654221 1111 457788
Q ss_pred EEEEecC------CCEEEEEeCCCCCCCCCCeEEEEeCCCCcE-----------EEEeec-CCceEEEEEeCC-eEEEEE
Q 022387 132 VVEMLFR------CNILALVGGGPDPQYPLNKVMIWDDHQSRC-----------IGELSF-RSEVRSVKLRRD-RIIVVL 192 (298)
Q Consensus 132 ~~~~~~~------~~~~~~~~~~~~~~~~d~~v~iWD~~~~~~-----------~~~~~~-~~~v~~v~~~~~-~l~v~~ 192 (298)
.+.|++. +..+|.++ .|++|+|||+.++.. ...+.. ...|.+++|+++ .++++.
T Consensus 212 ~v~wsp~~~~~~~~~~LAs~s-------~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs 284 (524)
T 2j04_B 212 DLKWHEGCHAPHLVGCLSFVS-------QEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGF 284 (524)
T ss_dssp EEEECSSCCCSSSSCEEEEEE-------TTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEE
T ss_pred EEEECCCCCCCCCCceEEEEe-------cCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCeEEEEe
Confidence 8888875 35777777 689999999987532 123433 357999999865 444444
Q ss_pred -CCeEEEEEcCCC-eEEEEEeccCCCcceEEEEeCCCC-eEEEEecCCCceEEEEEcCCcc-eEeeccccc--ceeEEEE
Q 022387 193 -EQKIFVYNFADL-KLLHQIETIANPKGLCAVSQGVGS-LVLVCPGLQKGQVRVEHYASKR-TKFIMAHDS--RIACFAL 266 (298)
Q Consensus 193 -~~~I~iwd~~~~-~~i~~~~~~~~~~~~~~~s~~~d~-~~la~sGs~dg~v~i~~~~~~~-~~~~~~H~~--~V~~l~f 266 (298)
+++|++||+++. .+...+..|..++..+++.+.+++ .+|| +|+.||+|+|||+.... ..++.+|.. .|++|+|
T Consensus 285 ~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~la-S~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~f 363 (524)
T 2j04_B 285 KNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVS-TVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVY 363 (524)
T ss_dssp TTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEE-EEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEE
T ss_pred CCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEE-EeccCCeEEEEECCCCCcccccccccccCcccceEe
Confidence 589999999865 445568888888777755556665 6777 69999999999997643 346667764 5899999
Q ss_pred CCCCCEEEEEeCCCCEEEEEECCCCcEEEe
Q 022387 267 TQDGQLLATSSTKGTLVRIFNTLDGTLLQE 296 (298)
Q Consensus 267 spdg~~lAt~S~Dgt~IrIWd~~tg~~l~~ 296 (298)
+|+++.||+++.|++ |||||+++++++++
T Consensus 364 sp~~~~l~s~~~d~t-v~lwd~~~~~~~~~ 392 (524)
T 2j04_B 364 CPQIYSYIYSDGASS-LRAVPSRAAFAVHP 392 (524)
T ss_dssp ETTTTEEEEECSSSE-EEEEETTCTTCCEE
T ss_pred CCCcCeEEEeCCCCc-EEEEECccccccee
Confidence 999999999999999 99999999987654
No 99
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.91 E-value=2.1e-22 Score=186.56 Aligned_cols=199 Identities=11% Similarity=0.156 Sum_probs=154.6
Q ss_pred CCCCCCeEEEEEcCCCC-EEEEEcCCe-EEEEEcCCCce-------EEEEeeecCCceEEEEEec-CCCEEEEEeCCCCC
Q 022387 82 SSPPPTLLHISFNQDHG-CFAAGTDHG-FRIYNCDPFRE-------IFRRDFERGGGIGVVEMLF-RCNILALVGGGPDP 151 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg~-~lasgs~~g-i~vw~~~~~~~-------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 151 (298)
..|...|++++|+|++. +|++|+.+| |+||++..... ...... |...+..+.+.+ +...+++++
T Consensus 178 ~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~~l~s~~----- 251 (430)
T 2xyi_A 178 RGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTG-HTAVVEDVAWHLLHESLFGSVA----- 251 (430)
T ss_dssp ECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECC-CSSCEEEEEECSSCTTEEEEEE-----
T ss_pred cCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecC-CCCCEeeeEEeCCCCCEEEEEe-----
Confidence 46778999999999998 999999866 88999987321 111211 567788888887 566677766
Q ss_pred CCCCCeEEEEeCCCC---cEEEEee-cCCceEEEEEeCCe---EEEEE-CCeEEEEEcCC-CeEEEEEeccCCCcceEEE
Q 022387 152 QYPLNKVMIWDDHQS---RCIGELS-FRSEVRSVKLRRDR---IIVVL-EQKIFVYNFAD-LKLLHQIETIANPKGLCAV 222 (298)
Q Consensus 152 ~~~d~~v~iWD~~~~---~~~~~~~-~~~~v~~v~~~~~~---l~v~~-~~~I~iwd~~~-~~~i~~~~~~~~~~~~~~~ 222 (298)
.|+.|++||++++ ..+..+. +...|.++.|+++. ++++. ++.|++||+++ .+++.++..|...+..+++
T Consensus 252 --~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~ 329 (430)
T 2xyi_A 252 --DDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQW 329 (430)
T ss_dssp --TTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEE
T ss_pred --CCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEE
Confidence 6799999999976 4555554 45689999998742 44444 58999999987 5678888888777777777
Q ss_pred EeCCCCeEEEEecCCCceEEEEEcCC---------------cceEeecccccceeEEEECCCCC-EEEEEeCCCCEEEEE
Q 022387 223 SQGVGSLVLVCPGLQKGQVRVEHYAS---------------KRTKFIMAHDSRIACFALTQDGQ-LLATSSTKGTLVRIF 286 (298)
Q Consensus 223 s~~~d~~~la~sGs~dg~v~i~~~~~---------------~~~~~~~~H~~~V~~l~fspdg~-~lAt~S~Dgt~IrIW 286 (298)
++++. .+|+ +|+.||.|++|++.. ..+..+.+|...|++++|+|+++ +||+++.||. |+||
T Consensus 330 sp~~~-~~l~-s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~-i~iw 406 (430)
T 2xyi_A 330 SPHNE-TILA-SSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNI-MQVW 406 (430)
T ss_dssp CSSCT-TEEE-EEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSE-EEEE
T ss_pred CCCCC-CEEE-EEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCC-EEEe
Confidence 66542 3454 588999999999876 33457789999999999999999 9999999999 9999
Q ss_pred ECCCC
Q 022387 287 NTLDG 291 (298)
Q Consensus 287 d~~tg 291 (298)
++.++
T Consensus 407 ~~~~~ 411 (430)
T 2xyi_A 407 QMAEN 411 (430)
T ss_dssp EECHH
T ss_pred Ecccc
Confidence 98754
No 100
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.91 E-value=1.9e-22 Score=186.79 Aligned_cols=199 Identities=12% Similarity=0.105 Sum_probs=153.8
Q ss_pred cCCCCCCeEEEEEcCC-CCEEEEEcCCe-EEEEEcCC----------CceEEEEeeecCCceEEEEEecCCC-EEEEEeC
Q 022387 81 SSSPPPTLLHISFNQD-HGCFAAGTDHG-FRIYNCDP----------FREIFRRDFERGGGIGVVEMLFRCN-ILALVGG 147 (298)
Q Consensus 81 ~~~~~~~V~~v~fs~d-g~~lasgs~~g-i~vw~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 147 (298)
...|...|++++|+|+ +.+||+|+.+| |+||++.. ......... |...+..+.+.+... .+++++
T Consensus 124 ~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~~~~~~~~l~s~~- 201 (430)
T 2xyi_A 124 KINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRG-HQKEGYGLSWNPNLNGYLLSAS- 201 (430)
T ss_dssp EEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEEC-CSSCCCCEEECTTSTTEEEEEC-
T ss_pred EEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecC-CCCCeEEEEeCCCCCCeEEEEe-
Confidence 3567789999999997 68999999866 88999976 344444443 677888888888776 666665
Q ss_pred CCCCCCCCCeEEEEeCCCCcE-------EEEe-ecCCceEEEEEeC---CeEEEEE-CCeEEEEEcCCC---eEEEEEec
Q 022387 148 GPDPQYPLNKVMIWDDHQSRC-------IGEL-SFRSEVRSVKLRR---DRIIVVL-EQKIFVYNFADL---KLLHQIET 212 (298)
Q Consensus 148 ~~~~~~~d~~v~iWD~~~~~~-------~~~~-~~~~~v~~v~~~~---~~l~v~~-~~~I~iwd~~~~---~~i~~~~~ 212 (298)
.|++|++||+.++.. ...+ .+...|.++.|++ ..++++. ++.|++||+++. +.+..+..
T Consensus 202 ------~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~ 275 (430)
T 2xyi_A 202 ------DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDA 275 (430)
T ss_dssp ------TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEEC
T ss_pred ------CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeec
Confidence 679999999987321 2233 3445799999986 2444444 589999999876 57778888
Q ss_pred cCCCcceEEEEeCCCCeEEEEecCCCceEEEEEcCC--cceEeecccccceeEEEECCCC-CEEEEEeCCCCEEEEEECC
Q 022387 213 IANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYAS--KRTKFIMAHDSRIACFALTQDG-QLLATSSTKGTLVRIFNTL 289 (298)
Q Consensus 213 ~~~~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~--~~~~~~~~H~~~V~~l~fspdg-~~lAt~S~Dgt~IrIWd~~ 289 (298)
|...+..+++++++. .+++ +|+.||.|++|++.. ..+..+.+|...|++|+|+|++ .+||+++.||+ |+|||+.
T Consensus 276 ~~~~v~~i~~~p~~~-~~l~-tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~-i~iwd~~ 352 (430)
T 2xyi_A 276 HTAEVNCLSFNPYSE-FILA-TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRR-LHVWDLS 352 (430)
T ss_dssp CSSCEEEEEECSSCT-TEEE-EEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSC-CEEEEGG
T ss_pred CCCCeEEEEeCCCCC-CEEE-EEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCc-EEEEeCC
Confidence 877777777766542 2455 589999999999986 3466888999999999999998 47999999999 9999998
Q ss_pred C
Q 022387 290 D 290 (298)
Q Consensus 290 t 290 (298)
.
T Consensus 353 ~ 353 (430)
T 2xyi_A 353 K 353 (430)
T ss_dssp G
T ss_pred C
Confidence 7
No 101
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1.1e-21 Score=175.32 Aligned_cols=209 Identities=8% Similarity=0.047 Sum_probs=163.8
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEE
Q 022387 81 SSSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (298)
Q Consensus 81 ~~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~ 159 (298)
...|...|.+++|+|++++|++|+.++ +++|++.+.+...... +...+..+.+.+++..+++++... ...++.|+
T Consensus 70 ~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~--~~~~g~i~ 145 (369)
T 3zwl_B 70 LDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK--SPVPVKRVEFSPCGNYFLAILDNV--MKNPGSIN 145 (369)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE--CSSCEEEEEECTTSSEEEEEECCB--TTBCCEEE
T ss_pred hhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee--cCCCeEEEEEccCCCEEEEecCCc--cCCCCEEE
Confidence 346778999999999999999998865 8899999988776666 478899999999999888877210 00238999
Q ss_pred EEeCCCCcEE-----------EEee-cCC--ceEEEEEeCC--eEEEEE-CCeEEEEEcCC-CeEEEEEeccCCCcceEE
Q 022387 160 IWDDHQSRCI-----------GELS-FRS--EVRSVKLRRD--RIIVVL-EQKIFVYNFAD-LKLLHQIETIANPKGLCA 221 (298)
Q Consensus 160 iWD~~~~~~~-----------~~~~-~~~--~v~~v~~~~~--~l~v~~-~~~I~iwd~~~-~~~i~~~~~~~~~~~~~~ 221 (298)
+||+..+... ..+. +.. .+.++.|+++ .++++. ++.|++||+++ .+.+..+..|...+..++
T Consensus 146 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~ 225 (369)
T 3zwl_B 146 IYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQ 225 (369)
T ss_dssp EEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEE
T ss_pred EEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEE
Confidence 9998765321 1222 122 7888999875 455554 48999999988 788888888877766666
Q ss_pred EEeCCCCeEEEEecCCCceEEEEEcCCcceEeecccccceeEEEECCCCCEEEEEeCCC--------------CEEEEEE
Q 022387 222 VSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKG--------------TLVRIFN 287 (298)
Q Consensus 222 ~s~~~d~~~la~sGs~dg~v~i~~~~~~~~~~~~~H~~~V~~l~fspdg~~lAt~S~Dg--------------t~IrIWd 287 (298)
+++ ++.+|++ |+.||.|++||+..........|...+.+++|+|++++|++++.++ . |++||
T Consensus 226 ~~~--~~~~l~~-~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-i~~~d 301 (369)
T 3zwl_B 226 FSP--DLTYFIT-SSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFE-ARFYH 301 (369)
T ss_dssp ECT--TSSEEEE-EETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CE-EEEEE
T ss_pred ECC--CCCEEEE-ecCCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcce-eEEEe
Confidence 665 4577774 8999999999998876554344889999999999999999999998 7 99999
Q ss_pred CCCCcEEEec
Q 022387 288 TLDGTLLQEG 297 (298)
Q Consensus 288 ~~tg~~l~~~ 297 (298)
+.+++++.++
T Consensus 302 ~~~~~~~~~~ 311 (369)
T 3zwl_B 302 KIFEEEIGRV 311 (369)
T ss_dssp TTTCCEEEEE
T ss_pred cCCCcchhhe
Confidence 9999887654
No 102
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.90 E-value=1.4e-23 Score=189.55 Aligned_cols=194 Identities=8% Similarity=0.027 Sum_probs=141.8
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCc---eEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCe
Q 022387 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFR---EIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 157 (298)
..|...|.+++|+|+|++|++|+.++ ++||++.+.+ ....... |...+..+.+.+++..+++++ .|++
T Consensus 52 ~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-------~d~~ 123 (377)
T 3dwl_C 52 SDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLR-LNRAATFVRWSPNEDKFAVGS-------GARV 123 (377)
T ss_dssp CCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCC-CSSCEEEEECCTTSSCCEEEE-------SSSC
T ss_pred ecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecc-cCCceEEEEECCCCCEEEEEe-------cCCe
Confidence 35677999999999999999999755 8999998866 3222222 677888888888888888887 6799
Q ss_pred EEEEeCCCCc---EEEEee--cCCceEEEEEeCC--eEEEEE-CCeEEEEEcC------------------CCeEEEEEe
Q 022387 158 VMIWDDHQSR---CIGELS--FRSEVRSVKLRRD--RIIVVL-EQKIFVYNFA------------------DLKLLHQIE 211 (298)
Q Consensus 158 v~iWD~~~~~---~~~~~~--~~~~v~~v~~~~~--~l~v~~-~~~I~iwd~~------------------~~~~i~~~~ 211 (298)
|++||+++++ ....+. +...|.++.|+++ .++++. ++.|++||+. .++++.++
T Consensus 124 i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 202 (377)
T 3dwl_C 124 ISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY- 202 (377)
T ss_dssp EEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-
T ss_pred EEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-
Confidence 9999999876 355555 4568999999875 455544 5899999995 24555555
Q ss_pred ccCCCcceEEEEeCCCCeEEEEecCCCceEEEEEcCCcc-----eEeecccccceeEEEECCCCCEEEEEeCCCCEEEEE
Q 022387 212 TIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-----TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIF 286 (298)
Q Consensus 212 ~~~~~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~~-----~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIW 286 (298)
.|...+..+++++ ++.+|++ |+.||.|++|++.... +..+.+|...|++++|+|+|++||+|+.|+. + +|
T Consensus 203 ~~~~~v~~~~~sp--~~~~l~~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~-~-~~ 277 (377)
T 3dwl_C 203 PSGGWVHAVGFSP--SGNALAY-AGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSP-I-LL 277 (377)
T ss_dssp CCSSSEEEEEECT--TSSCEEE-EETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSE-E-EE
T ss_pred cCCceEEEEEECC--CCCEEEE-EeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcE-E-EE
Confidence 6666655555555 5577874 8999999999998764 4578899999999999999999999986665 5 77
Q ss_pred ECC
Q 022387 287 NTL 289 (298)
Q Consensus 287 d~~ 289 (298)
+..
T Consensus 278 ~~~ 280 (377)
T 3dwl_C 278 QGN 280 (377)
T ss_dssp CCC
T ss_pred EeC
Confidence 765
No 103
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.90 E-value=3.3e-23 Score=214.48 Aligned_cols=201 Identities=16% Similarity=0.244 Sum_probs=171.2
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEe
Q 022387 84 PPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWD 162 (298)
Q Consensus 84 ~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD 162 (298)
+...|.+++|+|+|+++++|+.+| +++|++.+.+....... |.+.+..+.+++++..+++++ .|++|++||
T Consensus 960 ~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~-h~~~v~~l~~s~dg~~l~s~~-------~dg~i~vwd 1031 (1249)
T 3sfz_A 960 PEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVG-HKKAVRHIQFTADGKTLISSS-------EDSVIQVWN 1031 (1249)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCC-CSSCCCCEEECSSSSCEEEEC-------SSSBEEEEE
T ss_pred ccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeeccc-CCCceEEEEECCCCCEEEEEc-------CCCEEEEEE
Confidence 345899999999999999999866 88999998876555443 677888899999998888877 679999999
Q ss_pred CCCCcEEEEeecCCceEEEEEeCCeEEEEE--CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEecCCCce
Q 022387 163 DHQSRCIGELSFRSEVRSVKLRRDRIIVVL--EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQ 240 (298)
Q Consensus 163 ~~~~~~~~~~~~~~~v~~v~~~~~~l~v~~--~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs~dg~ 240 (298)
+.+++......+...|.++.++++..+++. ++.|++||+.+++.+.++..|...+..+++++++ .+++ +|+.||.
T Consensus 1032 ~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~--~~l~-s~s~d~~ 1108 (1249)
T 3sfz_A 1032 WQTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDA--TKFS-STSADKT 1108 (1249)
T ss_dssp TTTTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSS--SSCE-EECCSSC
T ss_pred CCCCceEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCC--CEEE-EEcCCCc
Confidence 999988766667778999999886544433 5899999999999999999998888888887654 6777 4899999
Q ss_pred EEEEEcCCcc-eEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEe
Q 022387 241 VRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQE 296 (298)
Q Consensus 241 v~i~~~~~~~-~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~ 296 (298)
|++|++.... ...+.+|...|++++|+|||++||+|+.||+ |+|||+.+|+++++
T Consensus 1109 v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~-i~vwd~~~~~~~~~ 1164 (1249)
T 3sfz_A 1109 AKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGE-IRIWNVSDGQLLHS 1164 (1249)
T ss_dssp CCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSC-CCEEESSSSCCCCC
T ss_pred EEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCCE-EEEEECCCCceEEE
Confidence 9999997654 5588999999999999999999999999999 99999999987654
No 104
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.90 E-value=2.5e-22 Score=198.93 Aligned_cols=202 Identities=11% Similarity=0.016 Sum_probs=157.3
Q ss_pred CCCCCCeEEEEEcCC--CCEEEEEcCCe-EEEEEcCCCceEEEEeee-cCCceEEEEEecC--CCEEEEEeCCCCCCCCC
Q 022387 82 SSPPPTLLHISFNQD--HGCFAAGTDHG-FRIYNCDPFREIFRRDFE-RGGGIGVVEMLFR--CNILALVGGGPDPQYPL 155 (298)
Q Consensus 82 ~~~~~~V~~v~fs~d--g~~lasgs~~g-i~vw~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d 155 (298)
..|...|++++|+++ |++|++|+.|| +++|++.+.+......+. |...+..+.++++ +..+++++ .|
T Consensus 50 ~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs-------~d 122 (753)
T 3jro_A 50 TGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVAS-------SD 122 (753)
T ss_dssp CCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE-------TT
T ss_pred cCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEe-------CC
Confidence 457779999999988 99999999866 889999987633233221 6778889999888 78888877 68
Q ss_pred CeEEEEeCCCCcE--EEEe-ecCCceEEEEEeC---------------CeEEEEE-CCeEEEEEcCCC----eEEEEEec
Q 022387 156 NKVMIWDDHQSRC--IGEL-SFRSEVRSVKLRR---------------DRIIVVL-EQKIFVYNFADL----KLLHQIET 212 (298)
Q Consensus 156 ~~v~iWD~~~~~~--~~~~-~~~~~v~~v~~~~---------------~~l~v~~-~~~I~iwd~~~~----~~i~~~~~ 212 (298)
++|++||++++.. ...+ .+...|.++.|++ ..++++. ++.|++||+++. +.+.++..
T Consensus 123 g~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~ 202 (753)
T 3jro_A 123 GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG 202 (753)
T ss_dssp SEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECC
T ss_pred CcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecC
Confidence 9999999988732 2222 3456899999987 3455555 589999999765 56677777
Q ss_pred cCCCcceEEEEeCCC-CeEEEEecCCCceEEEEEcCCcc------eEeecccccceeEEEECCCCCEEEEEeCCCCEEEE
Q 022387 213 IANPKGLCAVSQGVG-SLVLVCPGLQKGQVRVEHYASKR------TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRI 285 (298)
Q Consensus 213 ~~~~~~~~~~s~~~d-~~~la~sGs~dg~v~i~~~~~~~------~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrI 285 (298)
|..++..++++++.. +.+++ +|+.||.|++|+..... ......|...|++++|+|+|++||+|+.||. |+|
T Consensus 203 h~~~V~~l~~sp~~~~~~~l~-s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~-I~v 280 (753)
T 3jro_A 203 HSDWVRDVAWSPTVLLRSYLA-SVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNK-VTL 280 (753)
T ss_dssp CSSCEEEEEECCCCSSSEEEE-EEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSC-EEC
T ss_pred CCCcEEEEEeccCCCCCCEEE-EEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCE-EEE
Confidence 877776676666511 47777 49999999999998752 2345668999999999999999999999999 999
Q ss_pred EECCCCc
Q 022387 286 FNTLDGT 292 (298)
Q Consensus 286 Wd~~tg~ 292 (298)
||+.++.
T Consensus 281 wd~~~~~ 287 (753)
T 3jro_A 281 WKENLEG 287 (753)
T ss_dssp CBCCSSS
T ss_pred EecCCCC
Confidence 9998643
No 105
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.90 E-value=2.2e-21 Score=179.75 Aligned_cols=196 Identities=15% Similarity=0.206 Sum_probs=160.8
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEE
Q 022387 82 SSPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i 160 (298)
..|...|.+++|+ +++|++|+.++ +++|++++.+....... |...+..+.+ +++.+++++ .|++|++
T Consensus 156 ~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~--~~~~l~s~s-------~dg~i~~ 223 (445)
T 2ovr_B 156 VGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYG-HTSTVRCMHL--HEKRVVSGS-------RDATLRV 223 (445)
T ss_dssp CCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEE--ETTEEEEEE-------TTSEEEE
T ss_pred cCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECC-CCCcEEEEEe--cCCEEEEEe-------CCCEEEE
Confidence 5678899999998 66899998765 88999999877655543 4555655554 567777777 6899999
Q ss_pred EeCCCCcEEEEeecC-CceEEEEEeCCeEEEEE-CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEecCCC
Q 022387 161 WDDHQSRCIGELSFR-SEVRSVKLRRDRIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQK 238 (298)
Q Consensus 161 WD~~~~~~~~~~~~~-~~v~~v~~~~~~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs~d 238 (298)
||+.+++.+..+..+ ..|.++.++++.++++. ++.|++||+++++.+.++..|...+..+++ ++.+++ +|+.|
T Consensus 224 wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~----~~~~l~-~~~~d 298 (445)
T 2ovr_B 224 WDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF----DGIHVV-SGSLD 298 (445)
T ss_dssp EESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE----CSSEEE-EEETT
T ss_pred EECCCCcEEEEEcCCcccEEEEEECCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE----CCCEEE-EEeCC
Confidence 999999988887654 58999999888888876 589999999999999999888776655555 346676 48999
Q ss_pred ceEEEEEcCCcc-eEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 239 GQVRVEHYASKR-TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 239 g~v~i~~~~~~~-~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
|.|++||..+.. +..+.+|...|.++++ ++++|++|+.||+ |+|||++++++++++
T Consensus 299 ~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~-i~vwd~~~~~~~~~~ 355 (445)
T 2ovr_B 299 TSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADST-VKIWDIKTGQCLQTL 355 (445)
T ss_dssp SCEEEEETTTCCEEEEECCCCSCEEEEEE--ETTEEEEEETTSC-EEEEETTTCCEEEEE
T ss_pred CeEEEEECCCCCEEEEEcCCcccEEEEEE--eCCEEEEEeCCCe-EEEEECCCCcEEEEE
Confidence 999999997665 4588999999999888 4679999999999 999999999988765
No 106
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.90 E-value=2.1e-22 Score=184.59 Aligned_cols=198 Identities=14% Similarity=0.045 Sum_probs=132.7
Q ss_pred cCCCCCCeEEEEEcC--------CCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCC-EEEEEeCCCC
Q 022387 81 SSSPPPTLLHISFNQ--------DHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCN-ILALVGGGPD 150 (298)
Q Consensus 81 ~~~~~~~V~~v~fs~--------dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 150 (298)
..+|.+.|++|+|+| ||++||+|++|+ ++|||+.+.+.+..... |...+..+.+.++.. .+++++
T Consensus 132 ~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~-~~~~v~~v~~~p~~~~~l~~~~---- 206 (393)
T 4gq1_A 132 KSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYP-LSSPGISVQFRPSNPNQLIVGE---- 206 (393)
T ss_dssp TTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEE-CSSCEEEEEEETTEEEEEEEEE----
T ss_pred cCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecC-CCCCcEEEEECCCCCceEEecC----
Confidence 357889999999998 899999999855 89999988766544433 577888888887654 566655
Q ss_pred CCCCCCeEEEEeCCCCcEEEEee--------------------------cCCceEEEEEe-C--CeEEEEE-CCeEEEEE
Q 022387 151 PQYPLNKVMIWDDHQSRCIGELS--------------------------FRSEVRSVKLR-R--DRIIVVL-EQKIFVYN 200 (298)
Q Consensus 151 ~~~~d~~v~iWD~~~~~~~~~~~--------------------------~~~~v~~v~~~-~--~~l~v~~-~~~I~iwd 200 (298)
.|++|++||+++++...+.. +...+.++.|. + ..++.+. ++++++||
T Consensus 207 ---~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd 283 (393)
T 4gq1_A 207 ---RNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWN 283 (393)
T ss_dssp ---TTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEE
T ss_pred ---CCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEE
Confidence 68999999998876543321 12356677775 3 3444444 58999999
Q ss_pred cCCCeEEEEEeccCCCc------------------ceEEEEeCCCCeEEEEecCCCceEEEEEcCCcc-eEeecccccce
Q 022387 201 FADLKLLHQIETIANPK------------------GLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRI 261 (298)
Q Consensus 201 ~~~~~~i~~~~~~~~~~------------------~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~~-~~~~~~H~~~V 261 (298)
+...+....+..+...+ ..+.+++..++.+++ +|+.||.|++||..... ...+..|..+|
T Consensus 284 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V 362 (393)
T 4gq1_A 284 LFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFAT-AHSQHGLIQLINTYEKDSNSIPIQLGMPI 362 (393)
T ss_dssp C-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEE-EETTTTEEEEEETTCTTCCEEEEECSSCE
T ss_pred CccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEE-EECCCCEEEEEECCCCcEEEEecCCCCcE
Confidence 98776655554332211 122344444555555 69999999999998764 44678899999
Q ss_pred eEEEECCCCCEEEEEeCCCCEEEEEECC
Q 022387 262 ACFALTQDGQLLATSSTKGTLVRIFNTL 289 (298)
Q Consensus 262 ~~l~fspdg~~lAt~S~Dgt~IrIWd~~ 289 (298)
++|+|||||++||++++|| +.||++.
T Consensus 363 ~svafspdG~~LA~as~~G--v~lvrL~ 388 (393)
T 4gq1_A 363 VDFCWHQDGSHLAIATEGS--VLLTRLM 388 (393)
T ss_dssp EEEEECTTSSEEEEEESSE--EEEEEEG
T ss_pred EEEEEcCCCCEEEEEeCCC--eEEEEEe
Confidence 9999999999999999765 5577653
No 107
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.90 E-value=1.7e-21 Score=179.67 Aligned_cols=198 Identities=16% Similarity=0.147 Sum_probs=159.8
Q ss_pred eEEEEEcCCCCEEEEEcCCeEEEEEcCCCceEEEEeee-cCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCC
Q 022387 88 LLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFE-RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQS 166 (298)
Q Consensus 88 V~~v~fs~dg~~lasgs~~gi~vw~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~ 166 (298)
++.|+||++ ++||+|.++.|+|||..+++......+. |...|..+.|++++..+++++ .|++|+|||++++
T Consensus 108 ~~~l~wS~~-n~lAvgld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs-------~Dg~v~iWd~~~~ 179 (420)
T 4gga_A 108 LNLVDWSSG-NVLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGT-------SSAEVQLWDVQQQ 179 (420)
T ss_dssp CBCEEECTT-SEEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEE-------TTSCEEEEETTTT
T ss_pred ceeEEECCC-CEEEEEeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEE-------CCCeEEEEEcCCC
Confidence 567999975 5899999999999999998876555542 455689999999999998887 7899999999999
Q ss_pred cEEEEeecC-CceEEEEEeCCeEEEEE-CCeEEEEEcCC-CeEEEEEeccCCCcceEEEEeCCCCeEEEEecCCCceEEE
Q 022387 167 RCIGELSFR-SEVRSVKLRRDRIIVVL-EQKIFVYNFAD-LKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRV 243 (298)
Q Consensus 167 ~~~~~~~~~-~~v~~v~~~~~~l~v~~-~~~I~iwd~~~-~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs~dg~v~i 243 (298)
+.+..+..+ ..+.++.+++..++++. ++.+++||... ...+.++..|...+..+. ..+++.+++ +|+.||.|++
T Consensus 180 ~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~--~~~~g~~l~-s~~~D~~v~i 256 (420)
T 4gga_A 180 KRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLR--WAPDGRHLA-SGGNDNLVNV 256 (420)
T ss_dssp EEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEE--ECTTSSEEE-EEETTSCEEE
T ss_pred cEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeee--ecCCCCeee-eeeccccceE
Confidence 998888765 47899999998888876 48999999964 556677777766554444 455568888 4999999999
Q ss_pred EEcCCcc-----eEeecccccceeEEEECCCC-CEEEEE--eCCCCEEEEEECCCCcEEEec
Q 022387 244 EHYASKR-----TKFIMAHDSRIACFALTQDG-QLLATS--STKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 244 ~~~~~~~-----~~~~~~H~~~V~~l~fspdg-~~lAt~--S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
|+..... +.....|...|.+++|+|++ .+||++ +.|++ |||||+.+++++..+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~-I~iwd~~t~~~~~~~ 317 (420)
T 4gga_A 257 WPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRH-IRIWNVCSGACLSAV 317 (420)
T ss_dssp EESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCE-EEEEETTTTEEEEEE
T ss_pred EeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCE-EEEEeCCccccceee
Confidence 9987543 34677899999999999975 566654 57999 999999999987654
No 108
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.90 E-value=1.8e-22 Score=186.05 Aligned_cols=197 Identities=8% Similarity=0.043 Sum_probs=145.9
Q ss_pred CCeEEEEEcCCC--CEEEEEcCCe-EEEEEcCCCceEE---------------------------------------EEe
Q 022387 86 PTLLHISFNQDH--GCFAAGTDHG-FRIYNCDPFREIF---------------------------------------RRD 123 (298)
Q Consensus 86 ~~V~~v~fs~dg--~~lasgs~~g-i~vw~~~~~~~~~---------------------------------------~~~ 123 (298)
..|++++|+|++ .+|++|+.++ ++||++....... ...
T Consensus 94 ~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (447)
T 3dw8_B 94 EKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFA 173 (447)
T ss_dssp CCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEEC
T ss_pred CceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEec
Confidence 789999999998 7888888755 8899987633210 111
Q ss_pred eecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCC-CcEEEEe--------ecCCceEEEEEeCCe---EEEE
Q 022387 124 FERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ-SRCIGEL--------SFRSEVRSVKLRRDR---IIVV 191 (298)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~-~~~~~~~--------~~~~~v~~v~~~~~~---l~v~ 191 (298)
..|...+..+.+.+++..++++ .|++|++||+++ ++.+..+ .+...|.++.|+++. ++++
T Consensus 174 ~~h~~~v~~~~~~~~~~~l~s~--------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~ 245 (447)
T 3dw8_B 174 NAHTYHINSISINSDYETYLSA--------DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYS 245 (447)
T ss_dssp SCCSSCCCEEEECTTSSEEEEE--------CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEE
T ss_pred cCCCcceEEEEEcCCCCEEEEe--------CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEE
Confidence 1167778888998888877764 269999999994 4444432 234579999999753 5555
Q ss_pred E-CCeEEEEEcCCCeE----EEEEeccCC------------CcceEEEEeCCCCeEEEEecCCCceEEEEEcCC-c-ceE
Q 022387 192 L-EQKIFVYNFADLKL----LHQIETIAN------------PKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYAS-K-RTK 252 (298)
Q Consensus 192 ~-~~~I~iwd~~~~~~----i~~~~~~~~------------~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~-~-~~~ 252 (298)
. ++.|++||+++++. +..+..|.. .+..++ +++++.+|++ |+. |.|++||+.. . .+.
T Consensus 246 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~s~~g~~l~~-~~~-~~v~iwd~~~~~~~~~ 321 (447)
T 3dw8_B 246 SSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVK--FSHSGRYMMT-RDY-LSVKVWDLNMENRPVE 321 (447)
T ss_dssp ETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEE--ECTTSSEEEE-EES-SEEEEEETTCCSSCSC
T ss_pred eCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEE--ECCCCCEEEE-eeC-CeEEEEeCCCCccccc
Confidence 4 58999999998876 677777654 444444 4556688885 666 9999999975 3 455
Q ss_pred eecccccc---------------eeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE
Q 022387 253 FIMAHDSR---------------IACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQ 295 (298)
Q Consensus 253 ~~~~H~~~---------------V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~ 295 (298)
.+.+|... +..++|+|+|++||+|+.||+ |+|||+.+++++.
T Consensus 322 ~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~-v~iwd~~~~~~~~ 378 (447)
T 3dw8_B 322 TYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNF-FRMFDRNTKRDIT 378 (447)
T ss_dssp CEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTE-EEEEETTTCCEEE
T ss_pred eeeccccccccccccccccccccceEEEECCCCCEEEEeccCCE-EEEEEcCCCccee
Confidence 78888643 334999999999999999999 9999999998763
No 109
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.90 E-value=2e-21 Score=180.69 Aligned_cols=197 Identities=8% Similarity=0.041 Sum_probs=152.4
Q ss_pred CCCCCeEEEEEcCCCCEE-EEEcC-CeEEEEEcC--CCceEEEEee-ecCCceEEEEEecCCCEEEEEeCCCCCCCCCCe
Q 022387 83 SPPPTLLHISFNQDHGCF-AAGTD-HGFRIYNCD--PFREIFRRDF-ERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (298)
Q Consensus 83 ~~~~~V~~v~fs~dg~~l-asgs~-~gi~vw~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 157 (298)
.|...|++++|+|||++| |+|+. +.++||++. ..+.+..... .+...+..+.+.+++..+++++ .++.
T Consensus 100 ~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-------~~g~ 172 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIAD-------KFGD 172 (450)
T ss_dssp CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEE-------TTSE
T ss_pred ccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEe-------CCCc
Confidence 455689999999999996 88877 458899998 6655444321 1457788899999998888887 6799
Q ss_pred EEEEeCCCCcEEE----Eee-cCCceEEEEEeCC-----eEEEEE-CCeEEEEEcCCCeEEEEE-eccCCCcceEEEEeC
Q 022387 158 VMIWDDHQSRCIG----ELS-FRSEVRSVKLRRD-----RIIVVL-EQKIFVYNFADLKLLHQI-ETIANPKGLCAVSQG 225 (298)
Q Consensus 158 v~iWD~~~~~~~~----~~~-~~~~v~~v~~~~~-----~l~v~~-~~~I~iwd~~~~~~i~~~-~~~~~~~~~~~~s~~ 225 (298)
|++||+.+++... .+. +...|.++.|+++ .++++. ++.|++||+.+++.+..+ ..|...+..++|+
T Consensus 173 v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-- 250 (450)
T 2vdu_B 173 VYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-- 250 (450)
T ss_dssp EEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC--
T ss_pred EEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC--
Confidence 9999998776442 333 4468999999987 444444 479999999988888774 4677777777777
Q ss_pred CCCeEEEEecCCCceEEEEEcCCcce-Eeecc-------------------------cccceeEEEECCCCCEEEEEe-C
Q 022387 226 VGSLVLVCPGLQKGQVRVEHYASKRT-KFIMA-------------------------HDSRIACFALTQDGQLLATSS-T 278 (298)
Q Consensus 226 ~d~~~la~sGs~dg~v~i~~~~~~~~-~~~~~-------------------------H~~~V~~l~fspdg~~lAt~S-~ 278 (298)
++.+|+ +|+.||.|++||+.+... ..+.. +...|.+|+|+|++++|++++ .
T Consensus 251 -d~~~l~-s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~ 328 (450)
T 2vdu_B 251 -KDYLLL-SAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEA 328 (450)
T ss_dssp -STTEEE-EEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETT
T ss_pred -CCCEEE-EEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECC
Confidence 457787 489999999999987653 34442 235799999999999999999 8
Q ss_pred CCCEEEEEEC--CCC
Q 022387 279 KGTLVRIFNT--LDG 291 (298)
Q Consensus 279 Dgt~IrIWd~--~tg 291 (298)
|+. |+||++ .++
T Consensus 329 d~~-i~iw~~~~~~~ 342 (450)
T 2vdu_B 329 TKC-IIILEMSEKQK 342 (450)
T ss_dssp CSE-EEEEEECSSST
T ss_pred CCe-EEEEEeccCCC
Confidence 888 999999 665
No 110
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.90 E-value=1.7e-22 Score=181.36 Aligned_cols=187 Identities=12% Similarity=0.069 Sum_probs=136.3
Q ss_pred EEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCC------
Q 022387 92 SFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH------ 164 (298)
Q Consensus 92 ~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~------ 164 (298)
.+.+|+.+|++|+.|| +++||+++.+.+..... +.+..+. +.+. ++.++ .|++|++|+..
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~---~~v~~~~--~~~~-~~s~s-------~D~~i~~w~~~~~~~~~ 109 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTITT---PNPRTGG--EHPA-IISRG-------PCNRLLLLYPGNQITIL 109 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEEE---ECCCTTC--CCCS-EEEEC-------STTEEEEEETTTEEEEE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEec---CCceeee--eCCc-eEEec-------CCCeEEEEEccCceEEe
Confidence 4456888999999866 88999998876555442 2233222 2333 44444 67999999655
Q ss_pred ---CCcEEEEeec--CCceEEEEEeC--C--eEEEEE-CCeEEEEEcCCCeEEEEEecc-CCCcceEEEEeCCCCeEEEE
Q 022387 165 ---QSRCIGELSF--RSEVRSVKLRR--D--RIIVVL-EQKIFVYNFADLKLLHQIETI-ANPKGLCAVSQGVGSLVLVC 233 (298)
Q Consensus 165 ---~~~~~~~~~~--~~~v~~v~~~~--~--~l~v~~-~~~I~iwd~~~~~~i~~~~~~-~~~~~~~~~s~~~d~~~la~ 233 (298)
+++.+..+.. ...|.++.+++ + .++++. +++|++||+++++.+..+..+ ...+.+++++ +++.++|
T Consensus 110 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~--pdg~~la- 186 (343)
T 3lrv_A 110 DSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLH--KDSLLLA- 186 (343)
T ss_dssp ETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEEC--TTSCEEE-
T ss_pred ecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEEC--CCCCEEE-
Confidence 5555555543 35799999987 3 444444 589999999999887666443 3345555554 5568888
Q ss_pred ecCCCceEEEEEcCCcce--Eeecc-cccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEe
Q 022387 234 PGLQKGQVRVEHYASKRT--KFIMA-HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQE 296 (298)
Q Consensus 234 sGs~dg~v~i~~~~~~~~--~~~~~-H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~ 296 (298)
+|+.||.|++||+..... ..+.. |...|++|+|+|+|++||+++ |++ |+|||+++++++++
T Consensus 187 sg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~-v~iwd~~~~~~~~~ 250 (343)
T 3lrv_A 187 LYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQT-VVCFDLRKDVGTLA 250 (343)
T ss_dssp EECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSB-EEEEETTSSTTCBS
T ss_pred EEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCe-EEEEEcCCCCccee
Confidence 499999999999987653 47887 999999999999999999999 558 99999999877543
No 111
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.89 E-value=3.1e-21 Score=182.55 Aligned_cols=188 Identities=9% Similarity=0.062 Sum_probs=149.0
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCC-----ceEEEEEecCCCEEEEEeCCCCCCCCCC
Q 022387 83 SPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGG-----GIGVVEMLFRCNILALVGGGPDPQYPLN 156 (298)
Q Consensus 83 ~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 156 (298)
.+...|.+|+|||||++||+++.+| ++||+.+. .+.... |.. .+..+++++++..+++++ .||
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~--~~~~~~~~sv~svafSPDG~~LAsgs-------~DG 151 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD--SKGNLSSRTYHCFEWNPIESSIVVGN-------EDG 151 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC--CSSCSTTTCEEEEEECSSSSCEEEEE-------TTS
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc--CCCccccccEEEEEEcCCCCEEEEEc-------CCC
Confidence 4467899999999999999999866 88999554 222222 232 488999999999999998 789
Q ss_pred eEEEEeCCCCc-------EEEEeec-----CCceEEEEEeCCeEEEEE-CCeEEEEEcCCCe---EEEEEe-ccCCCcce
Q 022387 157 KVMIWDDHQSR-------CIGELSF-----RSEVRSVKLRRDRIIVVL-EQKIFVYNFADLK---LLHQIE-TIANPKGL 219 (298)
Q Consensus 157 ~v~iWD~~~~~-------~~~~~~~-----~~~v~~v~~~~~~l~v~~-~~~I~iwd~~~~~---~i~~~~-~~~~~~~~ 219 (298)
+|+|||+.++. .+.++.. ...|.+++|+++.++++. +++|++||+.+.+ ..++++ .|...+..
T Consensus 152 tVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdgLaass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~s 231 (588)
T 2j04_A 152 ELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDVLVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITD 231 (588)
T ss_dssp EEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTEEEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCC
T ss_pred EEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCcEEEEeCCCeEEEEECCCCccccceeeecccccCcEEE
Confidence 99999999875 2555532 248999999999844444 5899999997766 345674 67677888
Q ss_pred EEEEeCCCCeEEEEecCCCceEEEEEcCCcceEeec-ccccceeEEEE--CCCCCEEEEEeCCCCEEEEEECC
Q 022387 220 CAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIM-AHDSRIACFAL--TQDGQLLATSSTKGTLVRIFNTL 289 (298)
Q Consensus 220 ~~~s~~~d~~~la~sGs~dg~v~i~~~~~~~~~~~~-~H~~~V~~l~f--spdg~~lAt~S~Dgt~IrIWd~~ 289 (298)
++|+ + ..+|+ ++ +|.|++|+........+. +|.+.|+.|+| +||++.||++++||+ |||...
T Consensus 232 vaFs--g--~~LAS-a~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~--klw~~d 296 (588)
T 2j04_A 232 LKIV--D--YKVVL-TC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY--KVLLED 296 (588)
T ss_dssp EEEE--T--TEEEE-EC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE--EEEESS
T ss_pred EEEE--C--CEEEE-Ee-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC--EEEeec
Confidence 8888 2 67775 44 599999999988775444 89999999999 999999999999997 999976
No 112
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.89 E-value=1.5e-21 Score=176.50 Aligned_cols=188 Identities=12% Similarity=0.094 Sum_probs=142.9
Q ss_pred CeEEEEEcCCCCEEE-EEcC-CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCC
Q 022387 87 TLLHISFNQDHGCFA-AGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (298)
Q Consensus 87 ~V~~v~fs~dg~~la-sgs~-~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~ 164 (298)
.+..+++.+++++++ +|+. +.++|||..+.+.+....+ ...+..+.+ +.+.++++. ++.|++||+.
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~~--~~~v~~v~~--~~~~~~~~~--------~~~i~i~d~~ 127 (355)
T 3vu4_A 60 HLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIKV--DAPVKDLFL--SREFIVVSY--------GDVISVFKFG 127 (355)
T ss_dssp CCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEEC--SSCEEEEEE--CSSEEEEEE--------TTEEEEEESS
T ss_pred CeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEEC--CCceEEEEE--cCCEEEEEE--------cCEEEEEECC
Confidence 477788999888875 4555 5689999999888776664 555555554 455666654 5789999999
Q ss_pred CC-cEEEEeecCCceEEEEEeCCeEEEE---ECCeEEEEEcCCCe---------------E-EEEEeccCCCcceEEEEe
Q 022387 165 QS-RCIGELSFRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLK---------------L-LHQIETIANPKGLCAVSQ 224 (298)
Q Consensus 165 ~~-~~~~~~~~~~~v~~v~~~~~~l~v~---~~~~I~iwd~~~~~---------------~-i~~~~~~~~~~~~~~~s~ 224 (298)
++ +.+..+.. ....+++++..++++ .++.|++||+.+++ + +..+..|...+..++|++
T Consensus 128 ~~~~~~~~~~~--~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~ 205 (355)
T 3vu4_A 128 NPWKRITDDIR--FGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNR 205 (355)
T ss_dssp TTCCBSSCCEE--EEEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECT
T ss_pred CCceeeEEecc--CCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECC
Confidence 87 66555544 333455666777765 24899999998765 2 677888888777777766
Q ss_pred CCCCeEEEEecCCCce-EEEEEcCCcc-eEeec-c-cccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCc
Q 022387 225 GVGSLVLVCPGLQKGQ-VRVEHYASKR-TKFIM-A-HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGT 292 (298)
Q Consensus 225 ~~d~~~la~sGs~dg~-v~i~~~~~~~-~~~~~-~-H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~ 292 (298)
++.+|| +|+.||+ |++||..+.. +.++. + |...|++|+|+|||++||++|.|++ |+|||++++.
T Consensus 206 --~g~~l~-s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~-v~iw~~~~~~ 273 (355)
T 3vu4_A 206 --KSDMVA-TCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWT-LHVFEIFNDQ 273 (355)
T ss_dssp --TSSEEE-EEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCE-EEEEESSCCS
T ss_pred --CCCEEE-EEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCE-EEEEEccCCC
Confidence 458888 5999998 9999998665 45777 5 9999999999999999999999999 9999998764
No 113
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.89 E-value=4e-22 Score=184.80 Aligned_cols=203 Identities=11% Similarity=0.079 Sum_probs=120.5
Q ss_pred CCCCCCeEEEEEcC-CCCEEEEEcCCe-EEEEEcCCCceEEEEeee-cCCceEEEEEecCCCEEEEEeCCCCCCCCCCeE
Q 022387 82 SSPPPTLLHISFNQ-DHGCFAAGTDHG-FRIYNCDPFREIFRRDFE-RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKV 158 (298)
Q Consensus 82 ~~~~~~V~~v~fs~-dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v 158 (298)
..|...|++|+|+| |+.+|++|+.|+ |+|||++........... +...+..+.+.+++..+++++ .|++|
T Consensus 161 ~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~-------~dg~i 233 (435)
T 4e54_B 161 IGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGD-------NVGNV 233 (435)
T ss_dssp CSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEEC-------SSSBE
T ss_pred cCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEe-------CCCcE
Confidence 56888999999998 789999999866 899999875443322210 122345566777777777665 45667
Q ss_pred EEEeCCCCcEEEEee-cCCc----------------------------------------------eEEEEEeCC--eEE
Q 022387 159 MIWDDHQSRCIGELS-FRSE----------------------------------------------VRSVKLRRD--RII 189 (298)
Q Consensus 159 ~iWD~~~~~~~~~~~-~~~~----------------------------------------------v~~v~~~~~--~l~ 189 (298)
++||++... +..+. +... |.+++|+++ .++
T Consensus 234 ~~wd~~~~~-~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~ 312 (435)
T 4e54_B 234 ILLNMDGKE-LWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLL 312 (435)
T ss_dssp EEEESSSCB-CCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEE
T ss_pred eeeccCcce-eEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeE
Confidence 777764322 22222 1223 444444432 233
Q ss_pred EEE-CCeEEEEEcCCCeEEEEEeccCCC----cceEEEEeCCCCeEEEE-----------ecCCCceEEEEEcCCcceE-
Q 022387 190 VVL-EQKIFVYNFADLKLLHQIETIANP----KGLCAVSQGVGSLVLVC-----------PGLQKGQVRVEHYASKRTK- 252 (298)
Q Consensus 190 v~~-~~~I~iwd~~~~~~i~~~~~~~~~----~~~~~~s~~~d~~~la~-----------sGs~dg~v~i~~~~~~~~~- 252 (298)
++. ++.|++||+.+++....+..|... ...+...+++++.++++ ++..++.|++|+..++.+.
T Consensus 313 s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~ 392 (435)
T 4e54_B 313 TTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMC 392 (435)
T ss_dssp EEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEE
T ss_pred EEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEE
Confidence 322 355666666555554444433211 11111112222233332 2345568999999876644
Q ss_pred e-ecccccceeEE-EECCCCCEEEEEeCCCCEEEEEECCCCcEE
Q 022387 253 F-IMAHDSRIACF-ALTQDGQLLATSSTKGTLVRIFNTLDGTLL 294 (298)
Q Consensus 253 ~-~~~H~~~V~~l-~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l 294 (298)
. ...|...|.++ +|||+|++||+|+ |++ |+|||+++|+..
T Consensus 393 ~l~~~~~~~v~s~~~fspdg~~lasg~-d~~-i~iW~~~~gk~r 434 (435)
T 4e54_B 393 QLYDPESSGISSLNEFNPMGDTLASAM-GYH-ILIWSQQEARTR 434 (435)
T ss_dssp EECCSSCCCCCCEEEECTTSSCEEEEC-SSE-EEECCCC-----
T ss_pred EEeCCCCCcEEEEEEECCCCCEEEEEc-CCc-EEEEECCcCeee
Confidence 4 45788899988 6999999999987 888 999999999754
No 114
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.89 E-value=5.8e-22 Score=181.31 Aligned_cols=200 Identities=7% Similarity=0.042 Sum_probs=152.7
Q ss_pred CCCCCCeEEEEEcCCC-CEEEEEcCCe-EEEEEcCCCceEEEEe-eecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeE
Q 022387 82 SSPPPTLLHISFNQDH-GCFAAGTDHG-FRIYNCDPFREIFRRD-FERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKV 158 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg-~~lasgs~~g-i~vw~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v 158 (298)
..|...|.+++|+|++ .+|++|+.++ ++|||+.+.+...... ..|...+..+.+.+++..+++++ .|++|
T Consensus 128 ~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------~d~~i 200 (402)
T 2aq5_A 128 EGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSC-------RDKRV 200 (402)
T ss_dssp ECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEE-------TTSEE
T ss_pred cCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEe-------cCCcE
Confidence 4678899999999998 6999998765 8899999987766652 11577889999999998888887 68999
Q ss_pred EEEeCCCCcEEEEe-ecC-C-ceEEEEEeCCe--EEEE----ECCeEEEEEcCCCeE-EEEEe-ccCCCcceEEEEeCCC
Q 022387 159 MIWDDHQSRCIGEL-SFR-S-EVRSVKLRRDR--IIVV----LEQKIFVYNFADLKL-LHQIE-TIANPKGLCAVSQGVG 227 (298)
Q Consensus 159 ~iWD~~~~~~~~~~-~~~-~-~v~~v~~~~~~--l~v~----~~~~I~iwd~~~~~~-i~~~~-~~~~~~~~~~~s~~~d 227 (298)
++||+++++.+..+ ..+ . .+.++.|+++. ++++ .++.|++||+++.+. +.... .+...+..++++ ++
T Consensus 201 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s--~~ 278 (402)
T 2aq5_A 201 RVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFD--PD 278 (402)
T ss_dssp EEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEE--TT
T ss_pred EEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEc--CC
Confidence 99999999988887 343 3 37889998754 3333 257999999987654 33333 233444444554 45
Q ss_pred CeEEEEecCCCceEEEEEcCCcc--eEeecc--cccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcE
Q 022387 228 SLVLVCPGLQKGQVRVEHYASKR--TKFIMA--HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTL 293 (298)
Q Consensus 228 ~~~la~sGs~dg~v~i~~~~~~~--~~~~~~--H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~ 293 (298)
+.+++++|+.||.|++|++.... +..+.. |...|++++|+|++.++++ .|+. +++|++.++++
T Consensus 279 ~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~-~~~~~l~~~~~ 345 (402)
T 2aq5_A 279 TNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEI-ARFYKLHERKC 345 (402)
T ss_dssp TTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEE-EEEEEEETTEE
T ss_pred CCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--ccee-EEEEEcCCCcE
Confidence 57776668899999999998765 445554 4589999999999999886 4667 99999998765
No 115
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.89 E-value=4.1e-20 Score=167.63 Aligned_cols=200 Identities=10% Similarity=0.073 Sum_probs=159.9
Q ss_pred CCeEEEEEcCCCCEE-EEEcC-CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeC
Q 022387 86 PTLLHISFNQDHGCF-AAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (298)
Q Consensus 86 ~~V~~v~fs~dg~~l-asgs~-~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~ 163 (298)
..+.+++|+|||++| ++++. +.+++||..+.+....... .+.+..+.+++++..+++++. .+++|++||+
T Consensus 32 ~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~--~~~v~~~~~spdg~~l~~~~~------~~~~v~v~d~ 103 (391)
T 1l0q_A 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPA--GSSPQGVAVSPDGKQVYVTNM------ASSTLSVIDT 103 (391)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSSEEEEEET------TTTEEEEEET
T ss_pred CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEEC--CCCccceEECCCCCEEEEEEC------CCCEEEEEEC
Confidence 368999999999976 56655 5689999999887666654 557888889888888777663 4589999999
Q ss_pred CCCcEEEEeecCCceEEEEEeCC--eEEEEE--CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEecCCCc
Q 022387 164 HQSRCIGELSFRSEVRSVKLRRD--RIIVVL--EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKG 239 (298)
Q Consensus 164 ~~~~~~~~~~~~~~v~~v~~~~~--~l~v~~--~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs~dg 239 (298)
.+++.+..+..+..+.++.|+++ .++++. ++.|++||+.+++.+..+..+..+ ..+.+++++..++++++.+|
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~---~~~~~~~dg~~l~~~~~~~~ 180 (391)
T 1l0q_A 104 TSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSP---KGIAVTPDGTKVYVANFDSM 180 (391)
T ss_dssp TTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSE---EEEEECTTSSEEEEEETTTT
T ss_pred CCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCc---ceEEECCCCCEEEEEeCCCC
Confidence 99999888888888999999875 454443 489999999999998888776443 34444555566655688999
Q ss_pred eEEEEEcCCcceEeecccccceeEEEECCCCCEEEEEe---CCCCEEEEEECCCCcEEEec
Q 022387 240 QVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSS---TKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 240 ~v~i~~~~~~~~~~~~~H~~~V~~l~fspdg~~lAt~S---~Dgt~IrIWd~~tg~~l~~~ 297 (298)
.|++||...........|...+.+++|+|+|++|++++ .|+. |++||+.++++++.+
T Consensus 181 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~-v~~~d~~~~~~~~~~ 240 (391)
T 1l0q_A 181 SISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNT-VSMIDTGTNKITARI 240 (391)
T ss_dssp EEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCE-EEEEETTTTEEEEEE
T ss_pred EEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCc-EEEEECCCCeEEEEE
Confidence 99999998876655455677899999999999999988 6888 999999999887654
No 116
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.88 E-value=3.7e-21 Score=183.85 Aligned_cols=188 Identities=12% Similarity=0.036 Sum_probs=135.3
Q ss_pred EEEEcCCCCEEEEEcCCeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCC-CCeEEEEeCCCCcE
Q 022387 90 HISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYP-LNKVMIWDDHQSRC 168 (298)
Q Consensus 90 ~v~fs~dg~~lasgs~~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~v~iWD~~~~~~ 168 (298)
+++|+|+|.+++++.++.+++|++...+.+.... +...+..+.+. +..+++++ . |+.|++||+.+++.
T Consensus 411 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~l~~~~-------~~d~~i~~~~~~~~~~ 479 (615)
T 1pgu_A 411 VASANNDGFTAVLTNDDDLLILQSFTGDIIKSVR--LNSPGSAVSLS--QNYVAVGL-------EEGNTIQVFKLSDLEV 479 (615)
T ss_dssp EEEECSSSEEEEEETTSEEEEEETTTCCEEEEEE--CSSCEEEEEEC--SSEEEEEE-------TTTSCEEEEETTEEEE
T ss_pred EEEEcCCCCEEEEeCCCceEEEeccCCceeeecc--cCCCceEEEEc--CCEEEEee-------cCCCeEEEEECCCccc
Confidence 3333333333333333334444443444433333 35666666666 67777776 5 79999999998766
Q ss_pred E-EEee-cCCceEEEEEeCC--eEEEEE-CCeEEEEEcCCCeEEEEEec-cCCCcceEEEEeCC--------CCeEEEEe
Q 022387 169 I-GELS-FRSEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIET-IANPKGLCAVSQGV--------GSLVLVCP 234 (298)
Q Consensus 169 ~-~~~~-~~~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~~~i~~~~~-~~~~~~~~~~s~~~--------d~~~la~s 234 (298)
. ..+. +...|.++.|+++ .++++. ++.|++||+.+++.+.++.. |...+..+++++.. ++.+|| +
T Consensus 480 ~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~-~ 558 (615)
T 1pgu_A 480 SFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVA-T 558 (615)
T ss_dssp EEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEE-E
T ss_pred cccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEE-E
Confidence 4 3333 3458999999875 455554 58999999999999988877 77777777776611 558888 4
Q ss_pred cCCCceEEEEEcCCc--ceEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCC
Q 022387 235 GLQKGQVRVEHYASK--RTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDG 291 (298)
Q Consensus 235 Gs~dg~v~i~~~~~~--~~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg 291 (298)
|+.||.|++|++... .+..+.+|...|++|+|+|+|+ |++++.||+ |+|||+.++
T Consensus 559 ~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~-v~iw~~~~~ 615 (615)
T 1pgu_A 559 GSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADAC-IKRWNVVLE 615 (615)
T ss_dssp EETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSC-EEEEEEC--
T ss_pred EcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCce-EEEEeeecC
Confidence 999999999999874 5668999999999999999999 999999999 999998753
No 117
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.87 E-value=1e-19 Score=167.23 Aligned_cols=204 Identities=13% Similarity=0.119 Sum_probs=160.3
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcC-CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEE
Q 022387 83 SPPPTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIW 161 (298)
Q Consensus 83 ~~~~~V~~v~fs~dg~~lasgs~-~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iW 161 (298)
.|...|.+++|+++|+++++++. +.+++|++++.+....... |...+..+.+.+++..+++++. .+++|++|
T Consensus 167 ~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~------~~~~i~~~ 239 (433)
T 3bws_A 167 KKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDL-TGKWSKILLYDPIRDLVYCSNW------ISEDISVI 239 (433)
T ss_dssp TTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEEC-SSSSEEEEEEETTTTEEEEEET------TTTEEEEE
T ss_pred ccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcC-CCCCeeEEEEcCCCCEEEEEec------CCCcEEEE
Confidence 56678999999999999999987 5588999998877655543 4667888889888887766653 46899999
Q ss_pred eCCCCcEEEEeecCCceEEEEEeCC--eEEEEE---------CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeE
Q 022387 162 DDHQSRCIGELSFRSEVRSVKLRRD--RIIVVL---------EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLV 230 (298)
Q Consensus 162 D~~~~~~~~~~~~~~~v~~v~~~~~--~l~v~~---------~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~ 230 (298)
|+++++.+..+.....+.++.++++ .++++. ++.|++||+.+++.+..+... .....++ +++++..
T Consensus 240 d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~-~~~~~~~--~~~~g~~ 316 (433)
T 3bws_A 240 DRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPP-GNKRHIV--SGNTENK 316 (433)
T ss_dssp ETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEE-ECEEEEE--ECSSTTE
T ss_pred ECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCC-CCcceEE--ECCCCCE
Confidence 9999998888888778999999875 455554 469999999998887776432 2233444 4555555
Q ss_pred EEEecCCCceEEEEEcCCcceEeecccccceeEEEECCCCCEEEEEeC---------------CCCEEEEEECCCCcEEE
Q 022387 231 LVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSST---------------KGTLVRIFNTLDGTLLQ 295 (298)
Q Consensus 231 la~sGs~dg~v~i~~~~~~~~~~~~~H~~~V~~l~fspdg~~lAt~S~---------------Dgt~IrIWd~~tg~~l~ 295 (298)
++++++.++.|.+|+...........|...+.+++|+|+|++|++++. ||. |++||+.+++++.
T Consensus 317 l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~-v~~~d~~~~~~~~ 395 (433)
T 3bws_A 317 IYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGK-VYVIDTTTDTVKE 395 (433)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCE-EEEEETTTTEEEE
T ss_pred EEEEecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceE-EEEEECCCCcEEE
Confidence 555689999999999987765544457888999999999999998877 568 9999999998876
Q ss_pred ec
Q 022387 296 EG 297 (298)
Q Consensus 296 ~~ 297 (298)
.+
T Consensus 396 ~~ 397 (433)
T 3bws_A 396 FW 397 (433)
T ss_dssp EE
T ss_pred Ee
Confidence 54
No 118
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.87 E-value=4.5e-19 Score=160.74 Aligned_cols=199 Identities=12% Similarity=0.066 Sum_probs=153.5
Q ss_pred CCeEEEEEcCCCCEEE-EEcC-CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeC
Q 022387 86 PTLLHISFNQDHGCFA-AGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (298)
Q Consensus 86 ~~V~~v~fs~dg~~la-sgs~-~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~ 163 (298)
..|.+++|+|||++|+ ++++ +.+++||+.+.+....... ...+..+.+.+++..+++++. .++.|++||+
T Consensus 74 ~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~------~~~~v~~~d~ 145 (391)
T 1l0q_A 74 SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT--GKSPLGLALSPDGKKLYVTNN------GDKTVSVINT 145 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSSEEEEEET------TTTEEEEEET
T ss_pred CCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC--CCCcceEEECCCCCEEEEEeC------CCCEEEEEEC
Confidence 3899999999999875 4545 5588999998877655553 567788888888887765553 4689999999
Q ss_pred CCCcEEEEeecCCceEEEEEeCC--eEEEEE--CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEecC--C
Q 022387 164 HQSRCIGELSFRSEVRSVKLRRD--RIIVVL--EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGL--Q 237 (298)
Q Consensus 164 ~~~~~~~~~~~~~~v~~v~~~~~--~l~v~~--~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs--~ 237 (298)
.+++.+..+..+..+..+.|+++ .++++. ++.|++||+++++.+..+..+. ....+.+++++.++++++. .
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~---~~~~~~~~~~g~~l~~~~~~~~ 222 (391)
T 1l0q_A 146 VTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEA---APSGIAVNPEGTKAYVTNVDKY 222 (391)
T ss_dssp TTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS---EEEEEEECTTSSEEEEEEECSS
T ss_pred CCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCC---CccceEECCCCCEEEEEecCcC
Confidence 99999888888888899999875 354443 4799999999998887776432 2334445556676665343 7
Q ss_pred CceEEEEEcCCcce-EeecccccceeEEEECCCCCEE-EEEeCCCCEEEEEECCCCcEEEec
Q 022387 238 KGQVRVEHYASKRT-KFIMAHDSRIACFALTQDGQLL-ATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 238 dg~v~i~~~~~~~~-~~~~~H~~~V~~l~fspdg~~l-At~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
++.|.+||...... ..+..|. .+.+++|+|+|++| ++++.|++ |+|||+.++++++++
T Consensus 223 ~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~-v~v~d~~~~~~~~~~ 282 (391)
T 1l0q_A 223 FNTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNT-VSVIDTATNTITATM 282 (391)
T ss_dssp CCEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTE-EEEEETTTTEEEEEE
T ss_pred CCcEEEEECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCE-EEEEECCCCcEEEEE
Confidence 89999999987654 4566554 58999999999877 77788998 999999999987654
No 119
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.86 E-value=2e-20 Score=167.80 Aligned_cols=196 Identities=8% Similarity=0.080 Sum_probs=145.4
Q ss_pred CCCCCCeEEEEEcC--CCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeE
Q 022387 82 SSPPPTLLHISFNQ--DHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKV 158 (298)
Q Consensus 82 ~~~~~~V~~v~fs~--dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v 158 (298)
..|...|.+++|+| ++++|++|+.++ +++||+.+.+........+...+..+.+.+++..+++++ .|++|
T Consensus 122 ~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~-------~dg~i 194 (343)
T 3lrv_A 122 VDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYS-------PDGIL 194 (343)
T ss_dssp CCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEEC-------TTSCE
T ss_pred cCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEc-------CCCEE
Confidence 45567899999999 999999999865 899999988775444322345688888888888887776 68999
Q ss_pred EEEeCCCCcEE-EEeec--CCceEEEEEeCC--eEEEEECCeEEEEEcCCCeEEEEEec---cCCCcceEEEEeCCCCeE
Q 022387 159 MIWDDHQSRCI-GELSF--RSEVRSVKLRRD--RIIVVLEQKIFVYNFADLKLLHQIET---IANPKGLCAVSQGVGSLV 230 (298)
Q Consensus 159 ~iWD~~~~~~~-~~~~~--~~~v~~v~~~~~--~l~v~~~~~I~iwd~~~~~~i~~~~~---~~~~~~~~~~s~~~d~~~ 230 (298)
++||+++++.+ ..+.. ...|.++.|+++ .++++.++.|++||+++.+.++++.. +...+...++++++++.+
T Consensus 195 ~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 274 (343)
T 3lrv_A 195 DVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKN 274 (343)
T ss_dssp EEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSE
T ss_pred EEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCE
Confidence 99999998876 66665 568999999875 56666778999999998876655543 222333234666677789
Q ss_pred EEEecCC-CceEEEEEcCCcc-eEeecccccceeEEEECC---CCCEEEEEeCCCCEEEEEECCC
Q 022387 231 LVCPGLQ-KGQVRVEHYASKR-TKFIMAHDSRIACFALTQ---DGQLLATSSTKGTLVRIFNTLD 290 (298)
Q Consensus 231 la~sGs~-dg~v~i~~~~~~~-~~~~~~H~~~V~~l~fsp---dg~~lAt~S~Dgt~IrIWd~~t 290 (298)
|++ |+. |+.|++|++.... .... .++..++|++ +++.|++++.||+ ++++-...
T Consensus 275 l~~-~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~~-~~~~~~~~ 333 (343)
T 3lrv_A 275 MIA-YSNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVCGDGG-IAAILKTN 333 (343)
T ss_dssp EEE-EETTTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEEETTE-EEEEEECS
T ss_pred EEE-ecCCCCcEEEEEEcccccceEe----cCceeEecCccccccceeEEEecCCc-eEEEEecC
Confidence 986 555 9999999986543 2222 6788999999 9999999999999 88876443
No 120
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.86 E-value=5e-21 Score=181.16 Aligned_cols=190 Identities=9% Similarity=0.053 Sum_probs=140.3
Q ss_pred CCeEEEEEcCCCCEEEEEcCCe-EE-----------------E----------EEcCCCceEEEEeeecCCceEEEEEec
Q 022387 86 PTLLHISFNQDHGCFAAGTDHG-FR-----------------I----------YNCDPFREIFRRDFERGGGIGVVEMLF 137 (298)
Q Consensus 86 ~~V~~v~fs~dg~~lasgs~~g-i~-----------------v----------w~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (298)
..|.+|+|+|||++||+|+.|+ ++ | |++.+.+......+.|...+..+.+++
T Consensus 16 ~~v~sv~~SpDG~~iASas~D~TV~d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~vawSP 95 (588)
T 2j04_A 16 DWKNNLTWARDGTLYLTTFPDISIGQPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVCKPSP 95 (588)
T ss_dssp SSSCCEEECTTSCEEEECSSSEEEEEECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEEEECS
T ss_pred ccEEEEEECCCCCEEEEEcCCceeecccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEEEECC
Confidence 5789999999999999999876 52 1 112211111111111456788999999
Q ss_pred CCCEEEEEeCCCCCCCCCCeEEEEeCCCCcEEEEeecCC-----ceEEEEEeCC--eEEEEE-CCeEEEEEcCCCe----
Q 022387 138 RCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRS-----EVRSVKLRRD--RIIVVL-EQKIFVYNFADLK---- 205 (298)
Q Consensus 138 ~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~~~~~~~~~~-----~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~~---- 205 (298)
++..+|+++ .|++|+|||.+. ++..+.++. .|.+++|+++ .+++++ +++|++||+.+++
T Consensus 96 dG~~LAs~s-------~dg~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~ 166 (588)
T 2j04_A 96 IDDWMAVLS-------NNGNVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTP 166 (588)
T ss_dssp SSSCEEEEE-------TTSCEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCC
T ss_pred CCCEEEEEe-------CCCcEEEEeCCc--eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccc
Confidence 999999988 789999999655 555566322 4999999985 566666 5899999998765
Q ss_pred ---EEEEEe----ccCCCcceEEEEeCCCCeEEEEecCCCceEEEEEcCCcce----Eee-cccccceeEEEECCCCCEE
Q 022387 206 ---LLHQIE----TIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRT----KFI-MAHDSRIACFALTQDGQLL 273 (298)
Q Consensus 206 ---~i~~~~----~~~~~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~~~----~~~-~~H~~~V~~l~fspdg~~l 273 (298)
.+.+++ +|...+..+++++ |+ ++ +++.|+.|++|+...+.. .++ .+|...|.+|+|+ |+.|
T Consensus 167 ~~i~l~ti~~~~~gh~~~V~sVawSP--dg--La-ass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~L 239 (588)
T 2j04_A 167 EFYFESSIRLSDAGSKDWVTHIVWYE--DV--LV-AALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKV 239 (588)
T ss_dssp CCEEEEEEECSCTTCCCCEEEEEEET--TE--EE-EEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEE
T ss_pred cceeeeeeecccccccccEEEEEEcC--Cc--EE-EEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEE
Confidence 367774 3445666666665 55 44 367899999999987663 246 4888999999999 6999
Q ss_pred EEEeCCCCEEEEEECCCCcE
Q 022387 274 ATSSTKGTLVRIFNTLDGTL 293 (298)
Q Consensus 274 At~S~Dgt~IrIWd~~tg~~ 293 (298)
|+++ |++ |+|||+.+++.
T Consensus 240 ASa~-~~t-IkLWd~~~~~~ 257 (588)
T 2j04_A 240 VLTC-PGY-VHKIDLKNYSI 257 (588)
T ss_dssp EEEC-SSE-EEEEETTTTEE
T ss_pred EEEe-CCe-EEEEECCCCeE
Confidence 9998 688 99999998877
No 121
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.86 E-value=2.1e-20 Score=171.26 Aligned_cols=203 Identities=13% Similarity=0.034 Sum_probs=125.4
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCC-eEEEEEcCCCceEEEEeee----cCCceEEEEEec--------CCCEEEEEeCCCC
Q 022387 84 PPPTLLHISFNQDHGCFAAGTDH-GFRIYNCDPFREIFRRDFE----RGGGIGVVEMLF--------RCNILALVGGGPD 150 (298)
Q Consensus 84 ~~~~V~~v~fs~dg~~lasgs~~-gi~vw~~~~~~~~~~~~~~----~~~~~~~~~~~~--------~~~~~~~~~~~~~ 150 (298)
+...+....+++++.+||+|+.| +++||+.+.........+. |.+.+..+.+++ ++..++.++
T Consensus 88 ~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s---- 163 (393)
T 4gq1_A 88 HDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVG---- 163 (393)
T ss_dssp ---------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEE----
T ss_pred cCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEE----
Confidence 33455566677788999999975 5999999887654333221 677888888875 456677776
Q ss_pred CCCCCCeEEEEeCCCCcEEE-EeecCCceEEEEEeCCe---EEEEE-CCeEEEEEcCCCeEEEEEe--------------
Q 022387 151 PQYPLNKVMIWDDHQSRCIG-ELSFRSEVRSVKLRRDR---IIVVL-EQKIFVYNFADLKLLHQIE-------------- 211 (298)
Q Consensus 151 ~~~~d~~v~iWD~~~~~~~~-~~~~~~~v~~v~~~~~~---l~v~~-~~~I~iwd~~~~~~i~~~~-------------- 211 (298)
.|++|+|||++++..+. .+.++..|.+++|+++. ++++. +++|++||+++++...+..
T Consensus 164 ---~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~ 240 (393)
T 4gq1_A 164 ---DDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLN 240 (393)
T ss_dssp ---TTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEE
T ss_pred ---CCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecc
Confidence 78999999998776544 45677899999999853 44443 5899999998776544332
Q ss_pred -----------ccCCCcceEEEEeCCCCeEEEEecCCCceEEEEEcCCcce-EeecccccceeEEEECC-----------
Q 022387 212 -----------TIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRT-KFIMAHDSRIACFALTQ----------- 268 (298)
Q Consensus 212 -----------~~~~~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~~~-~~~~~H~~~V~~l~fsp----------- 268 (298)
.|...+..+.+. .+++..++ +++.|+.+++|++...+. ..+..|...+..++++|
T Consensus 241 ~~~~~~~~~~~~~~~~v~~v~~~-~~dg~~l~-s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (393)
T 4gq1_A 241 TLPLVNTCHSSGIASSLANVRWI-GSDGSGIL-AMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSL 318 (393)
T ss_dssp SGGGC------CCSSSCSEEEEE-TTTTCEEE-EECTTSEEEEEEC-------------------CCSCSEEEECSSCCS
T ss_pred cccceeeeecccccccceeeeee-cCCCCEEE-EEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcc
Confidence 223333444443 24557777 489999999999876542 24445554444443333
Q ss_pred ---------CCCEEEEEeCCCCEEEEEECCCCcEEEe
Q 022387 269 ---------DGQLLATSSTKGTLVRIFNTLDGTLLQE 296 (298)
Q Consensus 269 ---------dg~~lAt~S~Dgt~IrIWd~~tg~~l~~ 296 (298)
++.++|+|+.||+ |+|||+.+++++..
T Consensus 319 ~~~~~~~~~~~~~~~sgs~Dg~-V~lwd~~~~~~~~~ 354 (393)
T 4gq1_A 319 LGACPHPRYMDYFATAHSQHGL-IQLINTYEKDSNSI 354 (393)
T ss_dssp SCCEECSSCTTEEEEEETTTTE-EEEEETTCTTCCEE
T ss_pred eeEEEccCCCCEEEEEECCCCE-EEEEECCCCcEEEE
Confidence 3457788899999 99999999987654
No 122
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.85 E-value=2.3e-19 Score=181.04 Aligned_cols=202 Identities=13% Similarity=0.143 Sum_probs=153.5
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCe-EEEEEcCCCc--------------------------------------------
Q 022387 83 SPPPTLLHISFNQDHGCFAAGTDHG-FRIYNCDPFR-------------------------------------------- 117 (298)
Q Consensus 83 ~~~~~V~~v~fs~dg~~lasgs~~g-i~vw~~~~~~-------------------------------------------- 117 (298)
.|...|++|+|+|||++||+|+.|+ |+||++++.+
T Consensus 486 ~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 565 (902)
T 2oaj_A 486 AKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGF 565 (902)
T ss_dssp SSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEE
T ss_pred CCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCcc
Confidence 6777999999999999999999865 8999987652
Q ss_pred -eEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCCcEEEE--e-----ecCCceEEEEEe-----
Q 022387 118 -EIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGE--L-----SFRSEVRSVKLR----- 184 (298)
Q Consensus 118 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~~~~~--~-----~~~~~v~~v~~~----- 184 (298)
.+..... |.+.+..+++++++ .+|+++ .|++|+|||++++..+.. + .+...|.+++|+
T Consensus 566 ~~~~~l~~-h~~~V~svafSpdG-~lAsgs-------~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~ 636 (902)
T 2oaj_A 566 MPSTAVHA-NKGKTSAINNSNIG-FVGIAY-------AAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYG 636 (902)
T ss_dssp EEEEEECC-CSCSEEEEEECBTS-EEEEEE-------TTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECT
T ss_pred ceeEEEEc-CCCcEEEEEecCCc-EEEEEe-------CCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecC
Confidence 1222222 67889999999888 888877 789999999988776542 2 233469999999
Q ss_pred CC-----eEEEEE-CCeEEEEEc---CCCeEEEEEeccC-----CCcceEE-EEeC--------------------CCCe
Q 022387 185 RD-----RIIVVL-EQKIFVYNF---ADLKLLHQIETIA-----NPKGLCA-VSQG--------------------VGSL 229 (298)
Q Consensus 185 ~~-----~l~v~~-~~~I~iwd~---~~~~~i~~~~~~~-----~~~~~~~-~s~~--------------------~d~~ 229 (298)
++ .+++++ +++|++||+ .+++...++..|. .++..++ |+.+ +++.
T Consensus 637 ~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~ 716 (902)
T 2oaj_A 637 DDGYSSILMVCGTDMGEVITYKILPASGGKFDVQLMDITNVTSKGPIHKIDAFSKETKSSCLATIPKMQNLSKGLCIPGI 716 (902)
T ss_dssp TSSSEEEEEEEEETTSEEEEEEEEECGGGCEEEEEEEEEECCSSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCCCEE
T ss_pred CCCCcceEEEEEecCCcEEEEEEecCCCCcEEEEecCceecCCCCceEEEEeEecCCCCcccCCHHHHhccCCCCCCCeE
Confidence 76 355554 589999999 7888888887663 4444333 4411 4556
Q ss_pred EEEEecCCCceEEEEEcCCcc-eEeecccccceeEE---E------ECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 230 VLVCPGLQKGQVRVEHYASKR-TKFIMAHDSRIACF---A------LTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 230 ~la~sGs~dg~v~i~~~~~~~-~~~~~~H~~~V~~l---~------fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
+||+ + +..|+||+..+.+ ......|...+.+| . |+++|..||+++.||+ |+||++.++++++++
T Consensus 717 ~l~~-~--~~~ir~~~~~~~k~~~k~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~g~-i~~~s~p~l~~~~~~ 790 (902)
T 2oaj_A 717 VLIT-G--FDDIRLITLGKSKSTHKGFKYPLAATGLSYISTVEKNNDRKNLTVIITLEINGH-LRVFTIPDFKEQMSE 790 (902)
T ss_dssp EEEE-C--SSEEEEECTTCCCEEEEECSSCEEEEEEEEEEEECSSSCEEEEEEEEEEETTSE-EEEEETTTCCEEEEE
T ss_pred EEEE-e--ccceEEEeCccccceeeEcccceeeeEEEEEEeccccccccCceEEEEEeCCCc-EEEEECcchHHHhhc
Confidence 7764 3 7789999998754 33555666667776 6 7899999999999999 999999999999875
No 123
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.83 E-value=5.9e-19 Score=155.47 Aligned_cols=157 Identities=14% Similarity=0.126 Sum_probs=125.3
Q ss_pred cCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCCc----EEEEee-cCCceEEEEEeC----CeEEEEE-CCe
Q 022387 126 RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSR----CIGELS-FRSEVRSVKLRR----DRIIVVL-EQK 195 (298)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~----~~~~~~-~~~~v~~v~~~~----~~l~v~~-~~~ 195 (298)
|.+.+..+.+.+++..+++++ .|++|++||+.++. .+..+. +...|.++.|++ ..++++. ++.
T Consensus 10 H~~~v~~~~~~~~~~~l~~~~-------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~ 82 (351)
T 3f3f_A 10 HDDLVHDVVYDFYGRHVATCS-------SDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKT 82 (351)
T ss_dssp CSSCEEEEEECSSSSEEEEEE-------TTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred cccceeEEEEcCCCCEEEEee-------CCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCe
Confidence 678899999999999888887 68999999998763 445555 446899999986 3455555 589
Q ss_pred EEEEEcCCC---------eEEEEEeccCCCcceEEEEeCCCCeEEEEecCCCceEEEEEcCCcc----------------
Q 022387 196 IFVYNFADL---------KLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR---------------- 250 (298)
Q Consensus 196 I~iwd~~~~---------~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~~---------------- 250 (298)
|++||+.++ +.+..+..|...+..++++++..+.++++ |+.||.|++||+....
T Consensus 83 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~-~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 161 (351)
T 3f3f_A 83 VKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLAC-LGNDGILRLYDALEPSDLRSWTLTSEMKVLSI 161 (351)
T ss_dssp EEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEE-EETTCEEEEEECSSTTCTTCCEEEEEEESCSC
T ss_pred EEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEE-ecCCCcEEEecCCChHHhcccccccccccccc
Confidence 999999876 66778888877777777766522577774 8999999999975321
Q ss_pred ---------------------------------------------eEeecccccceeEEEECCCC----CEEEEEeCCCC
Q 022387 251 ---------------------------------------------TKFIMAHDSRIACFALTQDG----QLLATSSTKGT 281 (298)
Q Consensus 251 ---------------------------------------------~~~~~~H~~~V~~l~fspdg----~~lAt~S~Dgt 281 (298)
...+.+|...|++|+|+|++ ++||+|+.||+
T Consensus 162 ~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~ 241 (351)
T 3f3f_A 162 PPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGR 241 (351)
T ss_dssp CCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSC
T ss_pred ccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCe
Confidence 33566899999999999998 89999999999
Q ss_pred EEEEEECCCC
Q 022387 282 LVRIFNTLDG 291 (298)
Q Consensus 282 ~IrIWd~~tg 291 (298)
|+|||++++
T Consensus 242 -i~iwd~~~~ 250 (351)
T 3f3f_A 242 -IRIFKITEK 250 (351)
T ss_dssp -EEEEEEEEC
T ss_pred -EEEEeCCCC
Confidence 999999876
No 124
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.83 E-value=2e-18 Score=154.28 Aligned_cols=205 Identities=11% Similarity=0.080 Sum_probs=130.9
Q ss_pred CeEEEEEcCCCC---EEEEEcCCeEEEEEcCCC---ceEEEEeeecCCceEEEE-------------------------E
Q 022387 87 TLLHISFNQDHG---CFAAGTDHGFRIYNCDPF---REIFRRDFERGGGIGVVE-------------------------M 135 (298)
Q Consensus 87 ~V~~v~fs~dg~---~lasgs~~gi~vw~~~~~---~~~~~~~~~~~~~~~~~~-------------------------~ 135 (298)
.|.++-|-.-|- +|+++++..+++|+.... +..+++++ |+..+..+. +
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~v~lw~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~ 119 (356)
T 2w18_A 41 DVSAMFWERAGCKEPCIITACEDVVSLWKALDAWQWEKLYTWHF-AEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFC 119 (356)
T ss_dssp EEEEEEEC----CEEEEEEEESSEEEEEEESSSSBEEEEEEEEC-CSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC
T ss_pred EEeeeeeccCCCCccEEEEeccceEEEcccCCCccceeeEEEec-cCceeEEEEEcCcccceeeeeeccccccceEEEEE
Confidence 466677765554 789999999999999887 66677776 333332222 2
Q ss_pred ecC----CCEEEEEeC---------CCC----CCCCCCeEEEEeCCC-CcEEEEeecC-CceEEEEEeC-----CeEEEE
Q 022387 136 LFR----CNILALVGG---------GPD----PQYPLNKVMIWDDHQ-SRCIGELSFR-SEVRSVKLRR-----DRIIVV 191 (298)
Q Consensus 136 ~~~----~~~~~~~~~---------~~~----~~~~d~~v~iWD~~~-~~~~~~~~~~-~~v~~v~~~~-----~~l~v~ 191 (298)
+++ ...++..+. +.- ....|++|++|++.. ++.+..+..+ ..+..++|++ ..++.+
T Consensus 120 spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSg 199 (356)
T 2w18_A 120 SSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGT 199 (356)
T ss_dssp ------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEE
T ss_pred CCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEe
Confidence 222 222222110 000 001478889999854 6666665544 3566666655 455554
Q ss_pred E-CCeEEEEEcCCCeEEEEEeccCCC-cce--EEEEeCCCCeEEE-----------EecCCCceEEEEEcCCcceE-ee-
Q 022387 192 L-EQKIFVYNFADLKLLHQIETIANP-KGL--CAVSQGVGSLVLV-----------CPGLQKGQVRVEHYASKRTK-FI- 254 (298)
Q Consensus 192 ~-~~~I~iwd~~~~~~i~~~~~~~~~-~~~--~~~s~~~d~~~la-----------~sGs~dg~v~i~~~~~~~~~-~~- 254 (298)
. |++|+|||+.++++++++..|... ..+ ++|+++ +.+++ ++|+.|++|++|+..+.... ++
T Consensus 200 S~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpd--G~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~ 277 (356)
T 2w18_A 200 TIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEM--GLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVML 277 (356)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEET--TEEEEEEC------------CCEEEEEEETTTTEEEEEEE
T ss_pred cCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCC--CCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEE
Confidence 4 689999999999999999865432 233 356664 46652 36899999999999877543 22
Q ss_pred ----cccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 255 ----MAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 255 ----~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
.+|...+.+..++ +.++|++|.|++ |||||+.+|++++++
T Consensus 278 ~~~p~Gh~~~~lsg~~s--g~~lASgS~DgT-IkIWDl~tGk~l~tL 321 (356)
T 2w18_A 278 YCLPPGQAGRFLEGDVK--DHCAAAILTSGT-IAIWDLLLGQCTALL 321 (356)
T ss_dssp ECCCTTCCCCEEEEEEE--TTEEEEEETTSC-EEEEETTTCSEEEEE
T ss_pred eeccCCCcceeEccccC--CCEEEEEcCCCc-EEEEECCCCcEEEEe
Confidence 4776665554444 889999999999 999999999999886
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.83 E-value=4.1e-18 Score=156.44 Aligned_cols=201 Identities=14% Similarity=0.075 Sum_probs=148.3
Q ss_pred CCCCCeEEEEEcCCCCEEE-EEcC-CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCC-CCCeEE
Q 022387 83 SPPPTLLHISFNQDHGCFA-AGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQY-PLNKVM 159 (298)
Q Consensus 83 ~~~~~V~~v~fs~dg~~la-sgs~-~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~v~ 159 (298)
.+...+.+++|+|+|++|+ +++. +.+++||+.+.+....... ...+..+.+.+++..+++++.+..... .|+.|+
T Consensus 209 ~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~ 286 (433)
T 3bws_A 209 LTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK--IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLG 286 (433)
T ss_dssp CSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC--CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEE
T ss_pred CCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC--CCCceEEEEcCCCCEEEEEECCCCccccCCCeEE
Confidence 4667899999999999875 5545 5588999998876555442 455777788888888877764321111 378999
Q ss_pred EEeCCCCcEEEEeecCCceEEEEEeCCe--EEEEE--CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEec
Q 022387 160 IWDDHQSRCIGELSFRSEVRSVKLRRDR--IIVVL--EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPG 235 (298)
Q Consensus 160 iWD~~~~~~~~~~~~~~~v~~v~~~~~~--l~v~~--~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sG 235 (298)
+||+.+++.+..+.+...+.++.|+++. ++++. ++.|++||+.+++.+..+.. ......+++ ++++.++++++
T Consensus 287 ~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~--s~dg~~l~~~~ 363 (433)
T 3bws_A 287 IYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPV-FDKPNTIAL--SPDGKYLYVSC 363 (433)
T ss_dssp EEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEEC-SSSEEEEEE--CTTSSEEEEEE
T ss_pred EEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecC-CCCCCeEEE--cCCCCEEEEEe
Confidence 9999999888877776788899998753 55553 48999999999998888763 333344444 45556665533
Q ss_pred CC--------------CceEEEEEcCCcceE-eecccccceeEEEECCCCCEEEEEeC-CCCEEEEEECCC
Q 022387 236 LQ--------------KGQVRVEHYASKRTK-FIMAHDSRIACFALTQDGQLLATSST-KGTLVRIFNTLD 290 (298)
Q Consensus 236 s~--------------dg~v~i~~~~~~~~~-~~~~H~~~V~~l~fspdg~~lAt~S~-Dgt~IrIWd~~t 290 (298)
.. ||.|++|+..+.... .+.. ...+.+++|+|+|++|++++. |++ |+||++..
T Consensus 364 ~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~-i~v~~~~~ 432 (433)
T 3bws_A 364 RGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQ-IRVYRRDG 432 (433)
T ss_dssp CCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTE-EEEEEETT
T ss_pred cCCCccccccccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEECCCCe-EEEEEecC
Confidence 33 679999999876654 4444 567999999999999998875 898 99999863
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.81 E-value=2e-17 Score=152.79 Aligned_cols=199 Identities=12% Similarity=0.022 Sum_probs=146.9
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCC----eEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeE
Q 022387 83 SPPPTLLHISFNQDHGCFAAGTDH----GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKV 158 (298)
Q Consensus 83 ~~~~~V~~v~fs~dg~~lasgs~~----gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v 158 (298)
.|...|.+++|+|||++||+++.+ .+++||+++.+...... +.+.+..+.+++++..+++++..+ .+..|
T Consensus 176 ~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~--~~~~~~~~~~spdg~~la~~~~~~----g~~~i 249 (415)
T 2hqs_A 176 RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVAS--FPRHNGAPAFSPDGSKLAFALSKT----GSLNL 249 (415)
T ss_dssp EESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEEC--CSSCEEEEEECTTSSEEEEEECTT----SSCEE
T ss_pred CCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeec--CCCcccCEEEcCCCCEEEEEEecC----CCceE
Confidence 456789999999999999988864 58899999877643333 466788889999999888665322 23569
Q ss_pred EEEeCCCCcEEEEeecCCceEEEEEeCC--eEEEEEC--C--eEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEE
Q 022387 159 MIWDDHQSRCIGELSFRSEVRSVKLRRD--RIIVVLE--Q--KIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLV 232 (298)
Q Consensus 159 ~iWD~~~~~~~~~~~~~~~v~~v~~~~~--~l~v~~~--~--~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la 232 (298)
++||+.+++......+...+.++.|+++ .+++..+ + .|.+||+.+++. ..+..+... ...+.+++++.+|+
T Consensus 250 ~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~--~~~~~~spdG~~l~ 326 (415)
T 2hqs_A 250 YVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQ--NQDADVSSDGKFMV 326 (415)
T ss_dssp EEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSE--EEEEEECTTSSEEE
T ss_pred EEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCc--ccCeEECCCCCEEE
Confidence 9999999877544445567889999876 3555553 2 788889987764 334334333 33445555668887
Q ss_pred EecCC--CceEEEEEcCCcceEeecccccceeEEEECCCCCEEEEEeCCC---CEEEEEECCCCc
Q 022387 233 CPGLQ--KGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKG---TLVRIFNTLDGT 292 (298)
Q Consensus 233 ~sGs~--dg~v~i~~~~~~~~~~~~~H~~~V~~l~fspdg~~lAt~S~Dg---t~IrIWd~~tg~ 292 (298)
+++.. ++.|.+|+..+.....+..|. .+.+++|+|||++|++++.|+ . |++||+..+.
T Consensus 327 ~~~~~~g~~~i~~~d~~~~~~~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~-l~~~d~~g~~ 389 (415)
T 2hqs_A 327 MVSSNGGQQHIAKQDLATGGVQVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSV-LNLVSTDGRF 389 (415)
T ss_dssp EEEECSSCEEEEEEETTTCCEEECCCSS-SCEEEEECTTSSEEEEEEEETTEEE-EEEEETTSCC
T ss_pred EEECcCCceEEEEEECCCCCEEEecCCC-CcCCeEEcCCCCEEEEEEcCCCccE-EEEEECCCCc
Confidence 64444 358888999888777777775 899999999999999999887 6 9999987543
No 127
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.75 E-value=2.2e-16 Score=135.97 Aligned_cols=203 Identities=6% Similarity=-0.089 Sum_probs=141.4
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCeEEEEEcCC-CceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEE
Q 022387 83 SPPPTLLHISFNQDHGCFAAGTDHGFRIYNCDP-FREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIW 161 (298)
Q Consensus 83 ~~~~~V~~v~fs~dg~~lasgs~~gi~vw~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iW 161 (298)
.|...|.+++|+|||++|++++++.+.+|++++ .+........+...+..+.+++++..+++++...+ ....|.+|
T Consensus 39 ~~~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~---~~~~l~~~ 115 (297)
T 2ojh_A 39 QTPELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEF---GKSAIYLL 115 (297)
T ss_dssp EESSCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTT---SSCEEEEE
T ss_pred cCCcceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCC---CcceEEEE
Confidence 345689999999999999999988899999988 65543322101245566788889988888773321 12344445
Q ss_pred eCCCCcEEEEeecCCceEEEEEeCC--eEEEE--ECCeEEEEEc--CCCeEEEEEeccCCCcceEEEEeCCCCeEEEEec
Q 022387 162 DDHQSRCIGELSFRSEVRSVKLRRD--RIIVV--LEQKIFVYNF--ADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPG 235 (298)
Q Consensus 162 D~~~~~~~~~~~~~~~v~~v~~~~~--~l~v~--~~~~I~iwd~--~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sG 235 (298)
|..+++ ...+.....+..+.|+++ .+++. .++.+++|++ .+.+ ...+..+...+ ..+.+++++..+++++
T Consensus 116 ~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~--~~~~~s~dg~~l~~~~ 191 (297)
T 2ojh_A 116 PSTGGT-PRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGV-ETRLTHGEGRN--DGPDYSPDGRWIYFNS 191 (297)
T ss_dssp ETTCCC-CEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCC-EEECCCSSSCE--EEEEECTTSSEEEEEE
T ss_pred ECCCCc-eEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCc-ceEcccCCCcc--ccceECCCCCEEEEEe
Confidence 555554 344555556888899875 34433 3588889886 3333 34444444444 4444555667777656
Q ss_pred CCCceEEEEEcC--CcceEeecccccceeEEEECCCCCEEEEEeCC-----------CCEEEEEECCCCcE
Q 022387 236 LQKGQVRVEHYA--SKRTKFIMAHDSRIACFALTQDGQLLATSSTK-----------GTLVRIFNTLDGTL 293 (298)
Q Consensus 236 s~dg~v~i~~~~--~~~~~~~~~H~~~V~~l~fspdg~~lAt~S~D-----------gt~IrIWd~~tg~~ 293 (298)
..++.+.+|++. .+....+..|...+.+++|+|+|++||.++.| +. |++||+.+++.
T Consensus 192 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~-l~~~d~~~~~~ 261 (297)
T 2ojh_A 192 SRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVR-VQLMDMDGGNV 261 (297)
T ss_dssp CTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEE-EEEEETTSCSC
T ss_pred cCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceE-EEEEecCCCCc
Confidence 678899998764 45567788888999999999999999999876 45 99999998865
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.75 E-value=4.8e-16 Score=148.51 Aligned_cols=194 Identities=12% Similarity=0.095 Sum_probs=148.7
Q ss_pred EEcCCCCEEEEEcC-CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeC--CCCcE
Q 022387 92 SFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD--HQSRC 168 (298)
Q Consensus 92 ~fs~dg~~lasgs~-~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~--~~~~~ 168 (298)
+|+|++.++++++. +.+.+||..+.+.+.+... ...+..+.+++++..+++++ .+++|++||+ .++++
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~--g~~~~~v~~spdg~~l~v~~-------~d~~V~v~D~~~~t~~~ 214 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDT--GYAVHISRMSASGRYLLVIG-------RDARIDMIDLWAKEPTK 214 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEEC--STTEEEEEECTTSCEEEEEE-------TTSEEEEEETTSSSCEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEec--CcccceEEECCCCCEEEEEC-------CCCeEEEEECcCCCCcE
Confidence 48999998998887 4588999999887766653 34477888899999998888 5699999999 88889
Q ss_pred EEEeecCCceEEEEEeC----C--eEEEEE--CCeEEEEEcCCCeEEEEEeccC----------C-CcceEEEEeCCCCe
Q 022387 169 IGELSFRSEVRSVKLRR----D--RIIVVL--EQKIFVYNFADLKLLHQIETIA----------N-PKGLCAVSQGVGSL 229 (298)
Q Consensus 169 ~~~~~~~~~v~~v~~~~----~--~l~v~~--~~~I~iwd~~~~~~i~~~~~~~----------~-~~~~~~~s~~~d~~ 229 (298)
+.++.....+..+.|++ + .++++. +++|.+||..++++++++..+. . .+..+.+++ ++.
T Consensus 215 ~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~--~~~ 292 (543)
T 1nir_A 215 VAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASH--EHP 292 (543)
T ss_dssp EEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECS--SSS
T ss_pred EEEEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECC--CCC
Confidence 88888777889999987 4 455554 5899999999999999887632 1 223344444 334
Q ss_pred EEEEecCCCceEEEEEcCCcc-eE-eecccccceeEEEECCCCCEEEEE-eCCCCEEEEEECCCCcEEEec
Q 022387 230 VLVCPGLQKGQVRVEHYASKR-TK-FIMAHDSRIACFALTQDGQLLATS-STKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 230 ~la~sGs~dg~v~i~~~~~~~-~~-~~~~H~~~V~~l~fspdg~~lAt~-S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
.++++...+|.|.+|++.... +. ....+...+..++|+|||++|+++ ..|++ |+|||+.+|+++.++
T Consensus 293 ~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~-v~v~D~~tg~l~~~i 362 (543)
T 1nir_A 293 EFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNK-VAVIDSKDRRLSALV 362 (543)
T ss_dssp EEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTE-EEEEETTTTEEEEEE
T ss_pred EEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCe-EEEEECCCCeEEEee
Confidence 444468899999999987643 22 122466779999999999976655 45788 999999999988653
No 129
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.75 E-value=1.5e-16 Score=139.43 Aligned_cols=148 Identities=16% Similarity=0.274 Sum_probs=118.8
Q ss_pred EEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCCcEEEEeecC---CceEEEEEeCC--eEEEEE-CCeEEEEEcCCC
Q 022387 131 GVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFR---SEVRSVKLRRD--RIIVVL-EQKIFVYNFADL 204 (298)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~~~~~~~~~---~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~ 204 (298)
.++.|+.+ +.+|++ .|++|+|||+.+++++..+..+ ..|.++.|+++ .++++. +++|++||+.++
T Consensus 29 ~~l~WS~~-~~lAvg--------~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~ 99 (318)
T 4ggc_A 29 NLVDWSSG-NVLAVA--------LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ 99 (318)
T ss_dssp BCEEECTT-SEEEEE--------ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred eEEEECCC-CEEEEE--------eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCc
Confidence 45677754 455553 3699999999999998887643 36999999874 455554 589999999999
Q ss_pred eEEEEEeccCCCcceEEEEeCCCCeEEEEecCCCceEEEEEcCCcc--eEeecccccceeEEEECCCCCEEEEEeCCCCE
Q 022387 205 KLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR--TKFIMAHDSRIACFALTQDGQLLATSSTKGTL 282 (298)
Q Consensus 205 ~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~~--~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~ 282 (298)
+.++++..|.... .+++.++ .+++ +|+.++.+++|+..... +..+.+|...+.+++|+++|++|++++.|++
T Consensus 100 ~~~~~~~~h~~~~--~~~~~~~--~~l~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~- 173 (318)
T 4ggc_A 100 KRLRNMTSHSARV--GSLSWNS--YILS-SGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNL- 173 (318)
T ss_dssp EEEEEEECCSSCE--EEEEEET--TEEE-EEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSC-
T ss_pred eeEEEecCccceE--EEeecCC--CEEE-EEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcc-
Confidence 9999999876654 4455554 5666 59999999998877643 4578899999999999999999999999999
Q ss_pred EEEEECCCCcE
Q 022387 283 VRIFNTLDGTL 293 (298)
Q Consensus 283 IrIWd~~tg~~ 293 (298)
|+|||+++++.
T Consensus 174 i~iwd~~~~~~ 184 (318)
T 4ggc_A 174 VNVWPSAPGEG 184 (318)
T ss_dssp EEEEESSCBTT
T ss_pred eeEEECCCCcc
Confidence 99999998764
No 130
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.74 E-value=1.1e-15 Score=134.64 Aligned_cols=205 Identities=7% Similarity=-0.018 Sum_probs=144.7
Q ss_pred CeEEEEEcCCCCEEE-EEcC-CeEEEEEcCCCceEEEEeeecC----CceEEEEEecCCCEEEEEeCCC---CCCC--CC
Q 022387 87 TLLHISFNQDHGCFA-AGTD-HGFRIYNCDPFREIFRRDFERG----GGIGVVEMLFRCNILALVGGGP---DPQY--PL 155 (298)
Q Consensus 87 ~V~~v~fs~dg~~la-sgs~-~gi~vw~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~---~~~~--~d 155 (298)
.+.+++|+|||++|+ ++.. +.+.+||..+.+.+......+. ..+..+.+.+++..++++..+. ...+ .+
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 366799999998765 4444 4588999988876655543110 1445667788888777764110 0000 25
Q ss_pred CeEEEEeCCCCcEEEEeecCCceEEEEEeCC--eEEEEECCeEEEEEcCCCeEEEEEeccC--CCc--------------
Q 022387 156 NKVMIWDDHQSRCIGELSFRSEVRSVKLRRD--RIIVVLEQKIFVYNFADLKLLHQIETIA--NPK-------------- 217 (298)
Q Consensus 156 ~~v~iWD~~~~~~~~~~~~~~~v~~v~~~~~--~l~v~~~~~I~iwd~~~~~~i~~~~~~~--~~~-------------- 217 (298)
+.|.+||..+++.+..+.....+..+.|+++ .++++ ++.|.+||+.+++.+..+..+. .+.
T Consensus 115 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 193 (337)
T 1pby_B 115 TRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL-GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHE 193 (337)
T ss_dssp CEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE-SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCT
T ss_pred ceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe-CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeecc
Confidence 8899999999988888777667788889875 34444 7899999999888877665432 100
Q ss_pred ------------------------------------------------ceEEEEeCCCCeEEEEecCCCceEEEEEcCCc
Q 022387 218 ------------------------------------------------GLCAVSQGVGSLVLVCPGLQKGQVRVEHYASK 249 (298)
Q Consensus 218 ------------------------------------------------~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~ 249 (298)
....+..++++.++++ + ++.|.+|+..+.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~-~--~~~v~~~d~~~~ 270 (337)
T 1pby_B 194 SSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFG-A--YNVLESFDLEKN 270 (337)
T ss_dssp TTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEE-E--ESEEEEEETTTT
T ss_pred CCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEE-e--CCeEEEEECCCC
Confidence 0112455666677775 3 689999999876
Q ss_pred ceE-eecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 250 RTK-FIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 250 ~~~-~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
... .+. ....+.+++|+|||++|++++.|+. |+|||+.+++.++++
T Consensus 271 ~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~-i~v~d~~~~~~~~~~ 317 (337)
T 1pby_B 271 ASIKRVP-LPHSYYSVNVSTDGSTVWLGGALGD-LAAYDAETLEKKGQV 317 (337)
T ss_dssp EEEEEEE-CSSCCCEEEECTTSCEEEEESBSSE-EEEEETTTCCEEEEE
T ss_pred cCcceec-CCCceeeEEECCCCCEEEEEcCCCc-EEEEECcCCcEEEEE
Confidence 554 333 3456899999999999999998998 999999999988764
No 131
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.73 E-value=1.5e-15 Score=144.98 Aligned_cols=198 Identities=10% Similarity=-0.008 Sum_probs=143.3
Q ss_pred CeEEEEEcCCCCEEEEEcC-CeEEEEEc--CCCceEEEEeeecCCceEEEEEec----CCCEEEEEeCCCCCCCCCCeEE
Q 022387 87 TLLHISFNQDHGCFAAGTD-HGFRIYNC--DPFREIFRRDFERGGGIGVVEMLF----RCNILALVGGGPDPQYPLNKVM 159 (298)
Q Consensus 87 ~V~~v~fs~dg~~lasgs~-~gi~vw~~--~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~d~~v~ 159 (298)
.+.+++|+|||++|++++. +.|++||+ .+.+.+.... +......+.+++ ++..+++++. .+++|.
T Consensus 180 ~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~--~g~~p~~va~sp~~~~dg~~l~v~~~------~~~~v~ 251 (543)
T 1nir_A 180 AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK--IGIEARSVESSKFKGYEDRYTIAGAY------WPPQFA 251 (543)
T ss_dssp TEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE--CCSEEEEEEECCSTTCTTTEEEEEEE------ESSEEE
T ss_pred ccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe--cCCCcceEEeCCCcCCCCCEEEEEEc------cCCeEE
Confidence 4889999999999999887 55889999 7776655554 356677888888 8888877662 358899
Q ss_pred EEeCCCCcEEEEeecC-----------C-ceEE--------------------------------------------EEE
Q 022387 160 IWDDHQSRCIGELSFR-----------S-EVRS--------------------------------------------VKL 183 (298)
Q Consensus 160 iWD~~~~~~~~~~~~~-----------~-~v~~--------------------------------------------v~~ 183 (298)
|||..+++++..+... . .+.+ +.|
T Consensus 252 v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~ 331 (543)
T 1nir_A 252 IMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGW 331 (543)
T ss_dssp EEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEE
T ss_pred EEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceE
Confidence 9998887766655321 0 1222 234
Q ss_pred eCC--eEEEEE--CCeEEEEEcCCCeEEEEEeccCCC--cceEEEEeCCC-CeEEEEecCCCceEEEEEcCC--------
Q 022387 184 RRD--RIIVVL--EQKIFVYNFADLKLLHQIETIANP--KGLCAVSQGVG-SLVLVCPGLQKGQVRVEHYAS-------- 248 (298)
Q Consensus 184 ~~~--~l~v~~--~~~I~iwd~~~~~~i~~~~~~~~~--~~~~~~s~~~d-~~~la~sGs~dg~v~i~~~~~-------- 248 (298)
+++ +++++. +++|.+||+.+++++.++.....+ .....+. +++ +.+++++...|++|.+|+...
T Consensus 332 spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~-~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~ 410 (543)
T 1nir_A 332 DSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFV-HPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAW 410 (543)
T ss_dssp CTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEE-ETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBT
T ss_pred CCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccC-CCCCccEEEeccCCCceEEEEEeCCCCCchhcC
Confidence 433 344444 479999999999999888864322 2233342 333 466664234689999999876
Q ss_pred cceEeecccccceeEEEECCCCCEEEEEe-------CCCCEEEEEECCCCcEE
Q 022387 249 KRTKFIMAHDSRIACFALTQDGQLLATSS-------TKGTLVRIFNTLDGTLL 294 (298)
Q Consensus 249 ~~~~~~~~H~~~V~~l~fspdg~~lAt~S-------~Dgt~IrIWd~~tg~~l 294 (298)
+.+.++..|...+..|+|+|||++|++++ .+++ |+|||+.+++++
T Consensus 411 ~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~-v~v~d~~~~~~~ 462 (543)
T 1nir_A 411 KKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQS-VAVFDLKNLDAK 462 (543)
T ss_dssp SEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTC-EEEEETTCTTSC
T ss_pred eEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCce-EEEEECCCCCCC
Confidence 34568899999999999999999999997 2778 999999999876
No 132
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.73 E-value=6.2e-15 Score=131.08 Aligned_cols=200 Identities=13% Similarity=0.043 Sum_probs=150.0
Q ss_pred CCeEEEEEcCCCCEEEEEcC--------CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCe
Q 022387 86 PTLLHISFNQDHGCFAAGTD--------HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (298)
Q Consensus 86 ~~V~~v~fs~dg~~lasgs~--------~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 157 (298)
..+..++|+|||++|++++. +.+.+||.++.+....... ......+.+.+++..++++.. .++.
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~v~~~------~~~~ 112 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN--DLKPFGATINNTTQTLWFGNT------VNSA 112 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE--SSCCCSEEEETTTTEEEEEET------TTTE
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec--CCCcceEEECCCCCEEEEEec------CCCE
Confidence 46889999999998888773 3488999998877666554 455666778888887766663 3589
Q ss_pred EEEEeCCCCcEEEEeecCC----------ceEEEEEeCC--eEEEEE---CCeEEEEEcCCCeEEEEEeccCCCcceEEE
Q 022387 158 VMIWDDHQSRCIGELSFRS----------EVRSVKLRRD--RIIVVL---EQKIFVYNFADLKLLHQIETIANPKGLCAV 222 (298)
Q Consensus 158 v~iWD~~~~~~~~~~~~~~----------~v~~v~~~~~--~l~v~~---~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~ 222 (298)
|.+||..+++.+..+.... .+..+.++++ .++++. ++.|.+||+.+++.+..+..+......+++
T Consensus 113 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 192 (353)
T 3vgz_A 113 VTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLAL 192 (353)
T ss_dssp EEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEE
T ss_pred EEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEE
Confidence 9999999999888777643 2577888764 466655 478999999999998888744444556677
Q ss_pred EeCCCCeEEEEecCCCceEEEEEcCCcceE-eec----ccccceeEEEECCCCCEEEEEeCC-CCEEEEEECCCCcEEEe
Q 022387 223 SQGVGSLVLVCPGLQKGQVRVEHYASKRTK-FIM----AHDSRIACFALTQDGQLLATSSTK-GTLVRIFNTLDGTLLQE 296 (298)
Q Consensus 223 s~~~d~~~la~sGs~dg~v~i~~~~~~~~~-~~~----~H~~~V~~l~fspdg~~lAt~S~D-gt~IrIWd~~tg~~l~~ 296 (298)
++++ ..+++ ++.++.|.+||..+.... .+. ++...+..++|+|+|++|+.++.+ +. |.+||+.+++.+++
T Consensus 193 s~dg--~~l~~-~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~-v~~~d~~~~~~~~~ 268 (353)
T 3vgz_A 193 DSEG--KRLYT-TNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAE-VLVVDTRNGNILAK 268 (353)
T ss_dssp ETTT--TEEEE-ECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSE-EEEEETTTCCEEEE
T ss_pred CCCC--CEEEE-EcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCE-EEEEECCCCcEEEE
Confidence 7655 55554 466899999998876543 333 255678999999999977776655 66 99999999998765
Q ss_pred c
Q 022387 297 G 297 (298)
Q Consensus 297 ~ 297 (298)
+
T Consensus 269 ~ 269 (353)
T 3vgz_A 269 V 269 (353)
T ss_dssp E
T ss_pred E
Confidence 4
No 133
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.73 E-value=9.9e-17 Score=149.12 Aligned_cols=197 Identities=14% Similarity=0.033 Sum_probs=137.4
Q ss_pred CeEEEEEcCCCCEEEEEcCCeEEEEEcCCC----------ceEEE----EeeecCCceEEEEEecCCCEEEEE--eCCCC
Q 022387 87 TLLHISFNQDHGCFAAGTDHGFRIYNCDPF----------REIFR----RDFERGGGIGVVEMLFRCNILALV--GGGPD 150 (298)
Q Consensus 87 ~V~~v~fs~dg~~lasgs~~gi~vw~~~~~----------~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 150 (298)
.+..+++++++.+|++|+.++++||+.... ..... ..+.+.+.+..+.+++++..++++ +++
T Consensus 38 ~~n~lavs~~~~~l~~~~~dgv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs-- 115 (434)
T 2oit_A 38 RSSLLAVSNKYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSE-- 115 (434)
T ss_dssp CCBCEEEETTTTEEEEEETTEEEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETT--
T ss_pred CccEEEEecCCCEEEEECCCEEEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccC--
Confidence 578899999999999999999999875311 01100 111134568888999888888853 333
Q ss_pred CCCCCCeEEEEeCCCC--------cE---EEEee-cCCceEEEEEeCC---eEEEEE-CCeEEEEEcCCCeEEEEEeccC
Q 022387 151 PQYPLNKVMIWDDHQS--------RC---IGELS-FRSEVRSVKLRRD---RIIVVL-EQKIFVYNFADLKLLHQIETIA 214 (298)
Q Consensus 151 ~~~~d~~v~iWD~~~~--------~~---~~~~~-~~~~v~~v~~~~~---~l~v~~-~~~I~iwd~~~~~~i~~~~~~~ 214 (298)
.|++|+|||+.++ +. +..+. +...|.++.|+++ .++++. +++|++||+++.+.+.....|.
T Consensus 116 ---~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~ 192 (434)
T 2oit_A 116 ---YGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPST 192 (434)
T ss_dssp ---TEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGG
T ss_pred ---CCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCC
Confidence 5799999998654 22 22233 3468999999975 355454 5899999999887766666665
Q ss_pred CCcceEEEEeCCCCeEEEEecCCCceEEEEEcCCcceEeeccc-------ccceeEEEECCCCCEEEEEe-CCCC-----
Q 022387 215 NPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAH-------DSRIACFALTQDGQLLATSS-TKGT----- 281 (298)
Q Consensus 215 ~~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~~~~~~~~H-------~~~V~~l~fspdg~~lAt~S-~Dgt----- 281 (298)
..+..+++ ++++.+|++ |+.||.|++|+.+......+..| ...|.+++|++++.++++.+ .||.
T Consensus 193 ~~v~~v~w--spdg~~las-gs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~ 269 (434)
T 2oit_A 193 VAVTSVCW--SPKGKQLAV-GKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSP 269 (434)
T ss_dssp GCEEEEEE--CTTSSCEEE-EETTSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCC
T ss_pred CceeEEEE--cCCCCEEEE-EcCCCcEEEEccCCcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCC
Confidence 55555554 555688884 89999999999984444444433 34899999999998886653 3322
Q ss_pred EEEEEECCCC
Q 022387 282 LVRIFNTLDG 291 (298)
Q Consensus 282 ~IrIWd~~tg 291 (298)
.+++|++++.
T Consensus 270 ~v~i~~l~~~ 279 (434)
T 2oit_A 270 DVVMALLPKK 279 (434)
T ss_dssp EEEEEECCCT
T ss_pred ceEEEEeccC
Confidence 3889999865
No 134
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.71 E-value=3.9e-15 Score=137.31 Aligned_cols=188 Identities=14% Similarity=0.061 Sum_probs=135.4
Q ss_pred CCEEEEEcC-------CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCCcEE
Q 022387 97 HGCFAAGTD-------HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCI 169 (298)
Q Consensus 97 g~~lasgs~-------~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~~~ 169 (298)
+..|+.++. ..+++||.+......... |...+..+.+++++..+++++... .+.+|++||+.+++..
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~--~~~~v~~~~~Spdg~~la~~s~~~----~~~~i~~~d~~tg~~~ 216 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHR--SPQPLMSPAWSPDGSKLAYVTFES----GRSALVIQTLANGAVR 216 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEE--ESSCEEEEEECTTSSEEEEEECTT----SSCEEEEEETTTCCEE
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCCEEEeC--CCCcceeeEEcCCCCEEEEEEecC----CCcEEEEEECCCCcEE
Confidence 556665543 358899998544322222 477889999999999998887321 1258999999998876
Q ss_pred EEeecCCceEEEEEeCCe--EEEEE--C--CeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEecCCCc--eE
Q 022387 170 GELSFRSEVRSVKLRRDR--IIVVL--E--QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKG--QV 241 (298)
Q Consensus 170 ~~~~~~~~v~~v~~~~~~--l~v~~--~--~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs~dg--~v 241 (298)
....+...+.++.|+++. +++.. + ..|++||+.+++. ..+..+...+..+ .+++|+..|++++..+| .|
T Consensus 217 ~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~--~~spdg~~l~~~s~~~g~~~i 293 (415)
T 2hqs_A 217 QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEP--TWFPDSQNLAFTSDQAGRPQV 293 (415)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEE--EECTTSSEEEEEECTTSSCEE
T ss_pred EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccce--EECCCCCEEEEEECCCCCcEE
Confidence 555566789999999864 44343 2 4699999988765 4555555444444 45556677776454566 56
Q ss_pred EEEEcCCcceEeecccccceeEEEECCCCCEEEEEeCC---CCEEEEEECCCCcEE
Q 022387 242 RVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTK---GTLVRIFNTLDGTLL 294 (298)
Q Consensus 242 ~i~~~~~~~~~~~~~H~~~V~~l~fspdg~~lAt~S~D---gt~IrIWd~~tg~~l 294 (298)
.+|+...+....+..|...+.+++|||||++||.++.+ .. |++||+.++++.
T Consensus 294 ~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~-i~~~d~~~~~~~ 348 (415)
T 2hqs_A 294 YKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQH-IAKQDLATGGVQ 348 (415)
T ss_dssp EEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEE-EEEEETTTCCEE
T ss_pred EEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceE-EEEEECCCCCEE
Confidence 66788777766777788899999999999999999875 46 999999998763
No 135
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.71 E-value=5.3e-15 Score=130.63 Aligned_cols=197 Identities=13% Similarity=0.127 Sum_probs=133.0
Q ss_pred CCCeEEEEEcCCCCEEEEEcC--CeEEEEEcC--CCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEE
Q 022387 85 PPTLLHISFNQDHGCFAAGTD--HGFRIYNCD--PFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (298)
Q Consensus 85 ~~~V~~v~fs~dg~~lasgs~--~gi~vw~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i 160 (298)
...+.+++|+|||++|++++. +.+++|+++ +........+...+.+..+.+++++..+++++. .++.|.+
T Consensus 37 ~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~------~~~~i~~ 110 (343)
T 1ri6_A 37 PGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSY------NAGNVSV 110 (343)
T ss_dssp SSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEET------TTTEEEE
T ss_pred CCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEec------CCCeEEE
Confidence 346778999999998888776 458899998 444332222222346677888888888777663 3588999
Q ss_pred EeCC---CCcEEEEeecCCceEEEEEeCC--eEEEEE--CCeEEEEEcCC-CeEEE----EEeccCCCcceEEEEeCCCC
Q 022387 161 WDDH---QSRCIGELSFRSEVRSVKLRRD--RIIVVL--EQKIFVYNFAD-LKLLH----QIETIANPKGLCAVSQGVGS 228 (298)
Q Consensus 161 WD~~---~~~~~~~~~~~~~v~~v~~~~~--~l~v~~--~~~I~iwd~~~-~~~i~----~~~~~~~~~~~~~~s~~~d~ 228 (298)
||+. ..+.+..+.....+.++.|+++ .++++. ++.|++||+.+ ++... .+..+.. .....+.+++++
T Consensus 111 ~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~pdg 189 (343)
T 1ri6_A 111 TRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEG-AGPRHMVFHPNE 189 (343)
T ss_dssp EEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTT-CCEEEEEECTTS
T ss_pred EECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCC-CCcceEEECCCC
Confidence 9994 4445555666667888899875 455554 58999999976 54432 2222211 223345556666
Q ss_pred eEEEEecCCCceEEEEEcCC--cce---Eeec----cc--ccceeEEEECCCCCEEE-EEeCCCCEEEEEECC
Q 022387 229 LVLVCPGLQKGQVRVEHYAS--KRT---KFIM----AH--DSRIACFALTQDGQLLA-TSSTKGTLVRIFNTL 289 (298)
Q Consensus 229 ~~la~sGs~dg~v~i~~~~~--~~~---~~~~----~H--~~~V~~l~fspdg~~lA-t~S~Dgt~IrIWd~~ 289 (298)
.++++++..++.|.+|++.. ... ..+. +| ...+..++|+|+|++|+ +++.|+. |++||+.
T Consensus 190 ~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~-i~v~d~~ 261 (343)
T 1ri6_A 190 QYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASL-ITVFSVS 261 (343)
T ss_dssp SEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTE-EEEEEEC
T ss_pred CEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCE-EEEEEEc
Confidence 76665677899999999853 222 1121 11 23577899999998777 5557888 9999998
No 136
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.71 E-value=1.7e-15 Score=134.31 Aligned_cols=206 Identities=8% Similarity=0.011 Sum_probs=140.0
Q ss_pred CeEEEEEcCCCCEEE-EEcC-CeEEEEEcCCCceEEEEeeec-----CCceEEEEEecCCCEEEEEeCC-----CCCCCC
Q 022387 87 TLLHISFNQDHGCFA-AGTD-HGFRIYNCDPFREIFRRDFER-----GGGIGVVEMLFRCNILALVGGG-----PDPQYP 154 (298)
Q Consensus 87 ~V~~v~fs~dg~~la-sgs~-~gi~vw~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 154 (298)
.+..++|+|||++++ ++.. +.+.+|+.++.+........+ ...+..+.+++++..++++... +.....
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 123 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVK 123 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccC
Confidence 356899999998665 4444 558899999887665554311 0114566788888888777621 000001
Q ss_pred CCeEEEEeCCCCc---EEEEeecCCceEEEEEeCCeEEEEECCeEEEEEcCCCeEEEEEeccC--CC-------------
Q 022387 155 LNKVMIWDDHQSR---CIGELSFRSEVRSVKLRRDRIIVVLEQKIFVYNFADLKLLHQIETIA--NP------------- 216 (298)
Q Consensus 155 d~~v~iWD~~~~~---~~~~~~~~~~v~~v~~~~~~l~v~~~~~I~iwd~~~~~~i~~~~~~~--~~------------- 216 (298)
++.|.+||+.+++ .+..+.....+.++.|+++.-+.+.++.|++||+.+++.+..+..+. .+
T Consensus 124 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~l~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (349)
T 1jmx_B 124 PPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPH 203 (349)
T ss_dssp CCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEEESSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCC
T ss_pred CCeEEEEECCCccccceeeeccCCCcccceeECCCCcEEEccCcEEEEeCCCCceeccccccccCCccccCccceeeecC
Confidence 3789999998843 34445555568888898764344456679999999888877775432 00
Q ss_pred ----------c-----------------------------------------ceEEEEeCC-CCeEEEEecCCCceEEEE
Q 022387 217 ----------K-----------------------------------------GLCAVSQGV-GSLVLVCPGLQKGQVRVE 244 (298)
Q Consensus 217 ----------~-----------------------------------------~~~~~s~~~-d~~~la~sGs~dg~v~i~ 244 (298)
. ....+..++ ++.++++ + ++.|.+|
T Consensus 204 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~-~--~~~v~~~ 280 (349)
T 1jmx_B 204 QSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYG-V--LNRLAKY 280 (349)
T ss_dssp CCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEE-E--ESEEEEE
T ss_pred CCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEE-E--cCeEEEE
Confidence 0 011222335 6667765 3 7899999
Q ss_pred EcCCcceE-eecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 245 HYASKRTK-FIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 245 ~~~~~~~~-~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
|..+.+.. .+. +...+.+++|+|||++|++++.++. |+|||++++++++++
T Consensus 281 d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~-v~v~d~~~~~~~~~~ 332 (349)
T 1jmx_B 281 DLKQRKLIKAAN-LDHTYYCVAFDKKGDKLYLGGTFND-LAVFNPDTLEKVKNI 332 (349)
T ss_dssp ETTTTEEEEEEE-CSSCCCEEEECSSSSCEEEESBSSE-EEEEETTTTEEEEEE
T ss_pred ECccCeEEEEEc-CCCCccceEECCCCCEEEEecCCCe-EEEEeccccceeeee
Confidence 99877654 333 3456889999999998888888888 999999999988764
No 137
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.70 E-value=1.6e-14 Score=127.59 Aligned_cols=199 Identities=10% Similarity=0.100 Sum_probs=136.5
Q ss_pred CCeEEEEEcCCCCEEEEEcC--CeEEEEEcCCCce-EEEEeeecCCceEE-EEEecCCCEEEEEeCCCCCCCCCCeEEEE
Q 022387 86 PTLLHISFNQDHGCFAAGTD--HGFRIYNCDPFRE-IFRRDFERGGGIGV-VEMLFRCNILALVGGGPDPQYPLNKVMIW 161 (298)
Q Consensus 86 ~~V~~v~fs~dg~~lasgs~--~gi~vw~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~v~iW 161 (298)
..+ +++|+|||++|++++. +.+.+||.++.+. ...... ...... +.+++++..++ ++.+.. ..+.|++|
T Consensus 41 ~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~-~~~~~~---~~~~i~v~ 113 (331)
T 3u4y_A 41 DFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQE--GQSSMADVDITPDDQFAV-TVTGLN---HPFNMQSY 113 (331)
T ss_dssp CEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEE--CSSCCCCEEECTTSSEEE-ECCCSS---SSCEEEEE
T ss_pred Ccc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEeccc--CCCCccceEECCCCCEEE-EecCCC---CcccEEEE
Confidence 345 9999999997665554 4588999988775 444433 333444 78888888887 442210 11289999
Q ss_pred eCCCCcEEEEeecCCceEEEEEeCC--eEEEEE-C-Ce-EEEEEcCCCeEEEEE--eccCCCcceEEEEeCCCCeEEEEe
Q 022387 162 DDHQSRCIGELSFRSEVRSVKLRRD--RIIVVL-E-QK-IFVYNFADLKLLHQI--ETIANPKGLCAVSQGVGSLVLVCP 234 (298)
Q Consensus 162 D~~~~~~~~~~~~~~~v~~v~~~~~--~l~v~~-~-~~-I~iwd~~~~~~i~~~--~~~~~~~~~~~~s~~~d~~~la~s 234 (298)
|..+++.+..+........+.|+++ .++++. . +. |.+|++.....+... ...........+..++++.+++++
T Consensus 114 d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~ 193 (331)
T 3u4y_A 114 SFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVA 193 (331)
T ss_dssp ETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEE
T ss_pred ECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEE
Confidence 9999999888888777889999986 455553 3 67 999998653322111 100111223444555666766556
Q ss_pred cCCCceEEEEEcCCcce----EeecccccceeEEEECCCCCEEEEEe-CCCCEEEEEECCCCcE
Q 022387 235 GLQKGQVRVEHYASKRT----KFIMAHDSRIACFALTQDGQLLATSS-TKGTLVRIFNTLDGTL 293 (298)
Q Consensus 235 Gs~dg~v~i~~~~~~~~----~~~~~H~~~V~~l~fspdg~~lAt~S-~Dgt~IrIWd~~tg~~ 293 (298)
+..++.|.+|+...... ..+. +...+..++|+|||++|+.++ .++. |.+||+.++++
T Consensus 194 ~~~~~~v~v~d~~~~~~~~~~~~~~-~~~~~~~~~~spdg~~l~v~~~~~~~-i~~~d~~~~~~ 255 (331)
T 3u4y_A 194 NLIGNSIGILETQNPENITLLNAVG-TNNLPGTIVVSRDGSTVYVLTESTVD-VFNFNQLSGTL 255 (331)
T ss_dssp ETTTTEEEEEECSSTTSCEEEEEEE-CSSCCCCEEECTTSSEEEEECSSEEE-EEEEETTTTEE
T ss_pred eCCCCeEEEEECCCCcccceeeecc-CCCCCceEEECCCCCEEEEEEcCCCE-EEEEECCCCce
Confidence 78899999999986554 3444 446789999999999776654 4666 99999999987
No 138
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.69 E-value=1.2e-15 Score=149.84 Aligned_cols=199 Identities=13% Similarity=0.024 Sum_probs=140.7
Q ss_pred CCCeEEEEEcCCCCEEEEEcC-C------eEEEEEcCCCceEEEEeeecCC------------------------ceEEE
Q 022387 85 PPTLLHISFNQDHGCFAAGTD-H------GFRIYNCDPFREIFRRDFERGG------------------------GIGVV 133 (298)
Q Consensus 85 ~~~V~~v~fs~dg~~lasgs~-~------gi~vw~~~~~~~~~~~~~~~~~------------------------~~~~~ 133 (298)
...|.+++|||||++||+++. + .+++|++++.+....... +.. .+..+
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDS-KVVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECG-GGTC--------------------CCEESCCC
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccch-hhcccccccccchhhhhhhhhhhccccCccee
Confidence 447999999999999998886 5 478999988765443332 111 25667
Q ss_pred EEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCC---cEEEEeecCCceEEEEEeCC--eEEEEECCeEEEEEcCCCeEEE
Q 022387 134 EMLFRCNILALVGGGPDPQYPLNKVMIWDDHQS---RCIGELSFRSEVRSVKLRRD--RIIVVLEQKIFVYNFADLKLLH 208 (298)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~---~~~~~~~~~~~v~~v~~~~~--~l~v~~~~~I~iwd~~~~~~i~ 208 (298)
.+++++..+++++ .++|++||+.++ +......+...+..+.|+++ .++.+.++.|++||+.+++..+
T Consensus 115 ~~SpDg~~l~~~~--------~~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~ 186 (741)
T 2ecf_A 115 QWSPDAQRLLFPL--------GGELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQ 186 (741)
T ss_dssp EECTTSSEEEEEE--------TTEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEE
T ss_pred EECCCCCEEEEEe--------CCcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEE
Confidence 8889999998887 278999999988 54433334467899999986 4666678899999998877654
Q ss_pred EEeccCCCc--------------ceEEEEeCCCCeEEEEecCCCc---------------------------------eE
Q 022387 209 QIETIANPK--------------GLCAVSQGVGSLVLVCPGLQKG---------------------------------QV 241 (298)
Q Consensus 209 ~~~~~~~~~--------------~~~~~s~~~d~~~la~sGs~dg---------------------------------~v 241 (298)
....+...+ ....+.+++|+..|++ ++.|+ .|
T Consensus 187 ~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~-~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l 265 (741)
T 2ecf_A 187 LTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAY-ARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKL 265 (741)
T ss_dssp CCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEE-EEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEE
T ss_pred eccCCccceeccccceeeeeccccccceEECCCCCEEEE-EEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEE
Confidence 333222211 0123444555577775 33332 67
Q ss_pred EEEEcCC-cceEeec---ccccceeEEEECCCCCEEEEEeC-----CCCEEEEEECCCCcEEE
Q 022387 242 RVEHYAS-KRTKFIM---AHDSRIACFALTQDGQLLATSST-----KGTLVRIFNTLDGTLLQ 295 (298)
Q Consensus 242 ~i~~~~~-~~~~~~~---~H~~~V~~l~fspdg~~lAt~S~-----Dgt~IrIWd~~tg~~l~ 295 (298)
.+|+..+ +....+. .|...+..++| |||++||.++. +.. |++||+.+|++..
T Consensus 266 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~-i~~~d~~~g~~~~ 326 (741)
T 2ecf_A 266 GVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLD-LVEVTLASNQQRV 326 (741)
T ss_dssp EEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEE-EEEEETTTCCEEE
T ss_pred EEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEE-EEEEECCCCceEE
Confidence 7788877 6554332 58889999999 99999998764 556 9999999998654
No 139
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.68 E-value=2.9e-14 Score=126.68 Aligned_cols=200 Identities=10% Similarity=0.025 Sum_probs=142.5
Q ss_pred CeEEEEEcCCCCEEEEE-cC-CeEEEEEcCCCceEEEEeeecCC---------ceEEEEEecCCCEEEEEeCCCCCCCCC
Q 022387 87 TLLHISFNQDHGCFAAG-TD-HGFRIYNCDPFREIFRRDFERGG---------GIGVVEMLFRCNILALVGGGPDPQYPL 155 (298)
Q Consensus 87 ~V~~v~fs~dg~~lasg-s~-~gi~vw~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~d 155 (298)
.+..++|++||++++++ .. +.+.+||.++.+........ .. ....+.++++++.++++..+ .+
T Consensus 90 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-----~~ 163 (353)
T 3vgz_A 90 KPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLD-DRKRTEEVRPLQPRELVADDATNTVYISGIG-----KE 163 (353)
T ss_dssp CCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESC-CCCCCSSCCCCEEEEEEEETTTTEEEEEEES-----SS
T ss_pred CcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecC-CCccccccCCCCCceEEECCCCCEEEEEecC-----CC
Confidence 46789999999966554 43 55889999988876655531 11 14667788888877776633 35
Q ss_pred CeEEEEeCCCCcEEEEee-cCCceEEEEEeCC--eEEEEE-CCeEEEEEcCCCeEEEEEeccCC----CcceEEEEeCCC
Q 022387 156 NKVMIWDDHQSRCIGELS-FRSEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIETIAN----PKGLCAVSQGVG 227 (298)
Q Consensus 156 ~~v~iWD~~~~~~~~~~~-~~~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~----~~~~~~~s~~~d 227 (298)
+.|.+||..+++.+..+. ....+..+.++++ .++++. ++.|.+||+.+++.+..+..... ....++++++
T Consensus 164 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~d-- 241 (353)
T 3vgz_A 164 SVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTA-- 241 (353)
T ss_dssp CEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETT--
T ss_pred ceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCC--
Confidence 889999999999888887 4445777888764 455554 47999999999999888775222 2223455554
Q ss_pred CeEEEEecCCCceEEEEEcCCcceE-eecccccceeEEEECCCCCEEE-EEeCCCCEEEEEECCCCcEEEec
Q 022387 228 SLVLVCPGLQKGQVRVEHYASKRTK-FIMAHDSRIACFALTQDGQLLA-TSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 228 ~~~la~sGs~dg~v~i~~~~~~~~~-~~~~H~~~V~~l~fspdg~~lA-t~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
+..+++++..++.|.+||..+.... .+..+. ...++|+|+|++++ +...+++ |.+||+.+++.+.++
T Consensus 242 g~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~-v~~~d~~~~~~~~~~ 310 (353)
T 3vgz_A 242 RQRAFITDSKAAEVLVVDTRNGNILAKVAAPE--SLAVLFNPARNEAYVTHRQAGK-VSVIDAKSYKVVKTF 310 (353)
T ss_dssp TTEEEEEESSSSEEEEEETTTCCEEEEEECSS--CCCEEEETTTTEEEEEETTTTE-EEEEETTTTEEEEEE
T ss_pred CCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC--CceEEECCCCCEEEEEECCCCe-EEEEECCCCeEEEEE
Confidence 4555555677799999999776543 444332 36799999998554 4446888 999999999887654
No 140
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.66 E-value=3.9e-15 Score=142.56 Aligned_cols=194 Identities=7% Similarity=-0.038 Sum_probs=126.6
Q ss_pred CCeEEEEEcCCCCEEEEEcC-Ce-EEEEEcCCCceEEEEeeecC-CceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEe
Q 022387 86 PTLLHISFNQDHGCFAAGTD-HG-FRIYNCDPFREIFRRDFERG-GGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWD 162 (298)
Q Consensus 86 ~~V~~v~fs~dg~~lasgs~-~g-i~vw~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD 162 (298)
.+|.+++|+|||++||+++. ++ ++||+++..+.. .... +. ..+....|+++ ..++.+..+. .+...+||.
T Consensus 22 ~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~-~lt~-~~~~~~~~~~~spd-~~l~~~~~~~----g~~~~~l~~ 94 (582)
T 3o4h_A 22 VEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETV-KLNR-EPINSVLDPHYGVG-RVILVRDVSK----GAEQHALFK 94 (582)
T ss_dssp SCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEE-ECCS-SCCSEECEECTTCS-EEEEEEECST----TSCCEEEEE
T ss_pred cchheeecCCCCCeEEEEEccCCceeEEEEcCCCcE-eeec-ccccccccccCCCC-eEEEEeccCC----CCcceEEEE
Confidence 47999999999999998875 54 789998665432 2221 12 23444444544 3333333111 134456655
Q ss_pred CCC---CcEEEEeecCC--ceEEEEEeCCeEEEEE--CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEec
Q 022387 163 DHQ---SRCIGELSFRS--EVRSVKLRRDRIIVVL--EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPG 235 (298)
Q Consensus 163 ~~~---~~~~~~~~~~~--~v~~v~~~~~~l~v~~--~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sG 235 (298)
+.. +... .+.... .+.++.++++.++++. .+.+.+||+.+++.......+ . ...+++++ +.+||+ +
T Consensus 95 ~~~~~~g~~~-~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~-~--~~~~~spD--G~~la~-~ 167 (582)
T 3o4h_A 95 VNTSRPGEEQ-RLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP-G--FGFVSDIR--GDLIAG-L 167 (582)
T ss_dssp EETTSTTCCE-ECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES-S--CEEEEEEE--TTEEEE-E
T ss_pred EeccCCCccc-cccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC-C--ceEEECCC--CCEEEE-E
Confidence 432 2222 333222 3445555666555443 466779999888765443332 2 45566665 478875 4
Q ss_pred CCC----ceEEEEEcCCcceEeecccccceeEEEECCCCCEEEEEeCCC--CEEEEEECCCCcEE
Q 022387 236 LQK----GQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKG--TLVRIFNTLDGTLL 294 (298)
Q Consensus 236 s~d----g~v~i~~~~~~~~~~~~~H~~~V~~l~fspdg~~lAt~S~Dg--t~IrIWd~~tg~~l 294 (298)
+.+ +.|++||..++....+..|...+..++|||||++||+++.|+ + |++||+.+|++.
T Consensus 168 ~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~-i~~~d~~~~~~~ 231 (582)
T 3o4h_A 168 GFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREAR-LVTVDPRDGSVE 231 (582)
T ss_dssp EEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEE-EEEECTTTCCEE
T ss_pred EEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeE-EEEEcCCCCcEE
Confidence 444 678889998888888899999999999999999999888888 7 999999998765
No 141
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.66 E-value=1.4e-13 Score=122.81 Aligned_cols=202 Identities=10% Similarity=0.098 Sum_probs=132.4
Q ss_pred CCCeEEEEEcCCCCEEEEEc-C-CeEEEEEcCCCc-eEEEEeeecC----------CceEEEEEecCCCEEEEEeCCCCC
Q 022387 85 PPTLLHISFNQDHGCFAAGT-D-HGFRIYNCDPFR-EIFRRDFERG----------GGIGVVEMLFRCNILALVGGGPDP 151 (298)
Q Consensus 85 ~~~V~~v~fs~dg~~lasgs-~-~gi~vw~~~~~~-~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~ 151 (298)
...+..++|+|||++|++++ . +.+++|+++..+ ......+.+. ..+..+.+.+++. ++++..
T Consensus 85 ~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~---- 159 (347)
T 3hfq_A 85 GTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDL---- 159 (347)
T ss_dssp SCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEET----
T ss_pred CCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeC----
Confidence 45678899999999888877 4 458899996432 2212222111 1256678888888 544442
Q ss_pred CCCCCeEEEEeCC-CCcEEE--Eeec--CCceEEEEEeCC--eEEEEE--CCeEEEEEcCC--CeE--EEEEeccCCC--
Q 022387 152 QYPLNKVMIWDDH-QSRCIG--ELSF--RSEVRSVKLRRD--RIIVVL--EQKIFVYNFAD--LKL--LHQIETIANP-- 216 (298)
Q Consensus 152 ~~~d~~v~iWD~~-~~~~~~--~~~~--~~~v~~v~~~~~--~l~v~~--~~~I~iwd~~~--~~~--i~~~~~~~~~-- 216 (298)
.++.|++||+. +++... .+.. ...+..+.|+++ .++++. ++.|.+|++.. ++. +..+......
T Consensus 160 --~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~ 237 (347)
T 3hfq_A 160 --GSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYT 237 (347)
T ss_dssp --TTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCC
T ss_pred --CCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCC
Confidence 35789999998 454332 2222 235677899876 355554 37999999863 443 2333322211
Q ss_pred --cceEEEEeCCCCeEEEEecCCCceEEEEEcCCc----ceEeecccccceeEEEECCCCCEEEEEeCC-CCEEEEE--E
Q 022387 217 --KGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASK----RTKFIMAHDSRIACFALTQDGQLLATSSTK-GTLVRIF--N 287 (298)
Q Consensus 217 --~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~----~~~~~~~H~~~V~~l~fspdg~~lAt~S~D-gt~IrIW--d 287 (298)
.....+.+++|+.+|++++..++.|.+|++... .+..+..|...++.++|+|||++|++++.+ +. |+|| |
T Consensus 238 ~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~-v~v~~~d 316 (347)
T 3hfq_A 238 AHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDN-ATLYARD 316 (347)
T ss_dssp SCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTE-EEEEEEC
T ss_pred CCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCc-EEEEEEe
Confidence 224455566677777656777899999998632 233556667789999999999999888766 66 9999 5
Q ss_pred CCCCcEE
Q 022387 288 TLDGTLL 294 (298)
Q Consensus 288 ~~tg~~l 294 (298)
..+|++.
T Consensus 317 ~~tg~l~ 323 (347)
T 3hfq_A 317 LTSGKLS 323 (347)
T ss_dssp TTTCCEE
T ss_pred CCCCeEE
Confidence 5677764
No 142
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.66 E-value=3.9e-14 Score=125.07 Aligned_cols=197 Identities=11% Similarity=0.131 Sum_probs=129.4
Q ss_pred CeEEEEEcCCCCEEEEEcC-Ce-EEEEEcCCC---ceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEE
Q 022387 87 TLLHISFNQDHGCFAAGTD-HG-FRIYNCDPF---REIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIW 161 (298)
Q Consensus 87 ~V~~v~fs~dg~~lasgs~-~g-i~vw~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iW 161 (298)
.+.+++|+|||++|++++. ++ +.+|+++.. +...... ....+..+.+.+++..+++++. .++.|++|
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~------~~~~v~~~ 156 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE--GLDGCHSANISPDNRTLWVPAL------KQDRICLF 156 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEEC--CCTTBCCCEECTTSSEEEEEEG------GGTEEEEE
T ss_pred CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccccccc--CCCCceEEEECCCCCEEEEecC------CCCEEEEE
Confidence 6789999999998876653 44 889999522 2222222 2345667778888887776652 35889999
Q ss_pred eCCC-CcEEE----Eee--cCCceEEEEEeCCe--EEEEE--CCeEEEEEcCC--CeE--EEEEeccC----CCcceEEE
Q 022387 162 DDHQ-SRCIG----ELS--FRSEVRSVKLRRDR--IIVVL--EQKIFVYNFAD--LKL--LHQIETIA----NPKGLCAV 222 (298)
Q Consensus 162 D~~~-~~~~~----~~~--~~~~v~~v~~~~~~--l~v~~--~~~I~iwd~~~--~~~--i~~~~~~~----~~~~~~~~ 222 (298)
|+.+ ++... .+. ....+..+.|+++. ++++. ++.|.+|++.. ++. +..+.... .......+
T Consensus 157 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i 236 (343)
T 1ri6_A 157 TVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADI 236 (343)
T ss_dssp EECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEE
T ss_pred EecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccce
Confidence 9987 55432 222 23467788998753 55554 47999999943 332 33333211 11233345
Q ss_pred EeCCCCeEEEEecCCCceEEEEEcC--Ccc---eEeecccccceeEEEECCCCCEEEEEe-CCCCEEEEE--ECCCCcE
Q 022387 223 SQGVGSLVLVCPGLQKGQVRVEHYA--SKR---TKFIMAHDSRIACFALTQDGQLLATSS-TKGTLVRIF--NTLDGTL 293 (298)
Q Consensus 223 s~~~d~~~la~sGs~dg~v~i~~~~--~~~---~~~~~~H~~~V~~l~fspdg~~lAt~S-~Dgt~IrIW--d~~tg~~ 293 (298)
.+++++.+|++++..++.|.+|++. .+. +..+..+.. +.+++|+|+|++|++++ .|+. |+|| |..+|+.
T Consensus 237 ~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~-v~v~~~d~~~g~~ 313 (343)
T 1ri6_A 237 HITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHH-ISVYEIVGEQGLL 313 (343)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCE-EEEEEEETTTTEE
T ss_pred EECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCe-EEEEEEcCCCcee
Confidence 5666667676667889999999997 222 223444444 99999999999888887 5787 9999 5556643
No 143
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.65 E-value=8.1e-14 Score=123.09 Aligned_cols=191 Identities=10% Similarity=0.096 Sum_probs=130.4
Q ss_pred EEEcCCCCE-EEEEcC-CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCCcE
Q 022387 91 ISFNQDHGC-FAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRC 168 (298)
Q Consensus 91 v~fs~dg~~-lasgs~-~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~~ 168 (298)
..|.+++.+ +++++. +.+++||.++.+....... +.... .+.+.+++..+++++. .++.|.+||..+++.
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~-~~~~s~dg~~l~~~~~------~~~~i~~~d~~~~~~ 74 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITL-GYDFV-DTAITSDCSNVVVTSD------FCQTLVQIETQLEPP 74 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEEC-CCCEE-EEEECSSSCEEEEEES------TTCEEEEEECSSSSC
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEc-cCCcc-eEEEcCCCCEEEEEeC------CCCeEEEEECCCCce
Confidence 346666665 556655 5588999999887666554 23444 7778888887777663 357999999999887
Q ss_pred -EEEeecCCceEE-EEEeCC--eEEEEECC----eEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEecCCCce
Q 022387 169 -IGELSFRSEVRS-VKLRRD--RIIVVLEQ----KIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQ 240 (298)
Q Consensus 169 -~~~~~~~~~v~~-v~~~~~--~l~v~~~~----~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs~dg~ 240 (298)
...+........ +.++++ .+++...+ .|.+||+.+++.+..+..+..+ ..++ +++++.++++++..++.
T Consensus 75 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~-~~~~--~spdg~~l~~~~~~~~~ 151 (331)
T 3u4y_A 75 KVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDA-VGIA--ISPNGNGLILIDRSSAN 151 (331)
T ss_dssp EEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTE-EEEE--ECTTSSCEEEEEETTTT
T ss_pred eEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCc-cceE--ECCCCCEEEEEecCCCc
Confidence 666666655555 888875 45533333 8999999999988887765443 3444 45555545445666677
Q ss_pred -EEEEEcCCcc-e----EeecccccceeEEEECCCCCEE-EEEeCCCCEEEEEECCCCcE
Q 022387 241 -VRVEHYASKR-T----KFIMAHDSRIACFALTQDGQLL-ATSSTKGTLVRIFNTLDGTL 293 (298)
Q Consensus 241 -v~i~~~~~~~-~----~~~~~H~~~V~~l~fspdg~~l-At~S~Dgt~IrIWd~~tg~~ 293 (298)
|.+|++.... + .....+...+..++|+|||++| +++..+++ |++||+.++++
T Consensus 152 ~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~-v~v~d~~~~~~ 210 (331)
T 3u4y_A 152 TVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNS-IGILETQNPEN 210 (331)
T ss_dssp EEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTE-EEEEECSSTTS
T ss_pred eEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCe-EEEEECCCCcc
Confidence 9999986432 1 1122334568999999999855 45556777 99999999987
No 144
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.65 E-value=1.7e-15 Score=148.31 Aligned_cols=206 Identities=8% Similarity=-0.015 Sum_probs=143.0
Q ss_pred CeEEEEEcCCCCEEEEEcCCeEEEEEcCCCceEEEEeeecCC---ceEEEEEecCCCEEEEEeCCCCC--CCCCCeEEEE
Q 022387 87 TLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGG---GIGVVEMLFRCNILALVGGGPDP--QYPLNKVMIW 161 (298)
Q Consensus 87 ~V~~v~fs~dg~~lasgs~~gi~vw~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~v~iW 161 (298)
.+.+++|+|||++++++.++.+++|+..+++....... +.. .+..+.+++++..+++++..... ...++.+.+|
T Consensus 18 ~~~~~~~spdg~~~~~~~dg~i~~~d~~~g~~~~~~~~-~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYREQKGTVRLWNVETNTSTVLIEG-KKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCCBSSSSCBCCCCSSSCEEEBCGGGCCCEEEECT-TTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred cccccEEcCCCcEEEEeCCCCEEEEECCCCcEEEEecc-ccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 46678999999988875556699999998876544432 222 37788899999999888643210 0124789999
Q ss_pred eCCCCcEEEEeecC----CceEEEEEeCC--eEEEEECCeEEEEEcCCCeEEEEEeccCCCc----------------ce
Q 022387 162 DDHQSRCIGELSFR----SEVRSVKLRRD--RIIVVLEQKIFVYNFADLKLLHQIETIANPK----------------GL 219 (298)
Q Consensus 162 D~~~~~~~~~~~~~----~~v~~v~~~~~--~l~v~~~~~I~iwd~~~~~~i~~~~~~~~~~----------------~~ 219 (298)
|+.+++. ..+... ..+..+.|+++ .++.+.++.|++||+.+++..+....+...+ ..
T Consensus 97 d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~ 175 (723)
T 1xfd_A 97 KIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTH 175 (723)
T ss_dssp ESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSS
T ss_pred ECCCCce-EeccCCccccccccccEECCCCCEEEEEECCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCc
Confidence 9999876 333322 23777889875 5777778999999998877655544433222 11
Q ss_pred EEEEeCCCCeEEEEecCC---------------------------------CceEEEEEcCCcce-Eeeccc------cc
Q 022387 220 CAVSQGVGSLVLVCPGLQ---------------------------------KGQVRVEHYASKRT-KFIMAH------DS 259 (298)
Q Consensus 220 ~~~s~~~d~~~la~sGs~---------------------------------dg~v~i~~~~~~~~-~~~~~H------~~ 259 (298)
..+.+++|+..||+.... +..|.+|+..+... ..+..| ..
T Consensus 176 ~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~ 255 (723)
T 1xfd_A 176 IAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREY 255 (723)
T ss_dssp EEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSE
T ss_pred ceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccc
Confidence 355566677888763322 12788899887653 455544 67
Q ss_pred ceeEEEECCCCCEEEEEeCC----CCEEEEEECCCCcEEE
Q 022387 260 RIACFALTQDGQLLATSSTK----GTLVRIFNTLDGTLLQ 295 (298)
Q Consensus 260 ~V~~l~fspdg~~lAt~S~D----gt~IrIWd~~tg~~l~ 295 (298)
.|.+++|||||++|++.+.. .. |++||+.+|++..
T Consensus 256 ~~~~~~~SpDg~~l~~~~~~~~~~~~-i~~~d~~~g~~~~ 294 (723)
T 1xfd_A 256 YITMVKWATSTKVAVTWLNRAQNVSI-LTLCDATTGVCTK 294 (723)
T ss_dssp EEEEEEESSSSEEEEEEEETTSCEEE-EEEEETTTCCEEE
T ss_pred eeEEEEEeCCCeEEEEEEcCCCCeEE-EEEEeCCCCcceE
Confidence 89999999999999877533 45 9999999998654
No 145
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.63 E-value=2e-13 Score=121.73 Aligned_cols=196 Identities=13% Similarity=0.137 Sum_probs=126.0
Q ss_pred CCeEEEEEcCCCCEEEEEcC---CeEEEEEcCCCceEEEEee-ecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEE
Q 022387 86 PTLLHISFNQDHGCFAAGTD---HGFRIYNCDPFREIFRRDF-ERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIW 161 (298)
Q Consensus 86 ~~V~~v~fs~dg~~lasgs~---~gi~vw~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iW 161 (298)
..+..++|+|||++++++.. +.+.+|++++........+ .+......+.+++++..+++++. .+++|++|
T Consensus 40 ~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~------~~~~v~v~ 113 (347)
T 3hfq_A 40 QNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANY------HKGTAEVM 113 (347)
T ss_dssp SCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEET------TTTEEEEE
T ss_pred CCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeC------CCCEEEEE
Confidence 35667999999994444432 4588999977653222221 13556777888999988887763 35899999
Q ss_pred eCCC-Cc--EEEEeecC----------CceEEEEEeCCe-EEEEE--CCeEEEEEcC-CCeEEE--EEeccCCCcceEEE
Q 022387 162 DDHQ-SR--CIGELSFR----------SEVRSVKLRRDR-IIVVL--EQKIFVYNFA-DLKLLH--QIETIANPKGLCAV 222 (298)
Q Consensus 162 D~~~-~~--~~~~~~~~----------~~v~~v~~~~~~-l~v~~--~~~I~iwd~~-~~~~i~--~~~~~~~~~~~~~~ 222 (298)
|+.. +. .+..+... ..+.++.|+++. ++++. ++.|++|++. +++... .+..... .....+
T Consensus 114 ~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g-~~p~~~ 192 (347)
T 3hfq_A 114 KIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAG-FGPRHL 192 (347)
T ss_dssp EECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTT-CCEEEE
T ss_pred EeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCC-CCCceE
Confidence 9963 32 23333322 137788998754 44443 4699999997 454322 2222111 123334
Q ss_pred EeCCCCeEEEEecCCCceEEEEEcCC--cceE---eecccc------cceeEEEECCCCCEE-EEEeCCCCEEEEEECC
Q 022387 223 SQGVGSLVLVCPGLQKGQVRVEHYAS--KRTK---FIMAHD------SRIACFALTQDGQLL-ATSSTKGTLVRIFNTL 289 (298)
Q Consensus 223 s~~~d~~~la~sGs~dg~v~i~~~~~--~~~~---~~~~H~------~~V~~l~fspdg~~l-At~S~Dgt~IrIWd~~ 289 (298)
.+++|+.++++++..++.|.+|++.. ..+. .+..+. ..+..++|+|||++| ++...+++ |+||++.
T Consensus 193 ~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~-v~v~~~~ 270 (347)
T 3hfq_A 193 VFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNT-LAVFAVT 270 (347)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTE-EEEEEEC
T ss_pred EECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCE-EEEEEEC
Confidence 55556676666678889999998764 3322 222222 358999999999977 56666888 9999997
No 146
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.60 E-value=2.2e-14 Score=140.79 Aligned_cols=194 Identities=12% Similarity=0.046 Sum_probs=135.1
Q ss_pred CeEEEEEcCCCCEEEEEcCCeEEEEEcCCC---ceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeC
Q 022387 87 TLLHISFNQDHGCFAAGTDHGFRIYNCDPF---REIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (298)
Q Consensus 87 ~V~~v~fs~dg~~lasgs~~gi~vw~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~ 163 (298)
.|.+++|||||++|++++.+.+.+|++++. ... .... +...+..+.+++++..+++++ +++|++||+
T Consensus 110 ~v~~~~~SpDg~~l~~~~~~~i~~~d~~~~~~~~~~-~l~~-~~~~~~~~~~SPDG~~la~~~--------~~~i~~~d~ 179 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLGGELYLYDLKQEGKAAVR-QLTH-GEGFATDAKLSPKGGFVSFIR--------GRNLWVIDL 179 (741)
T ss_dssp ESCCCEECTTSSEEEEEETTEEEEEESSSCSTTSCC-BCCC-SSSCEEEEEECTTSSEEEEEE--------TTEEEEEET
T ss_pred CcceeEECCCCCEEEEEeCCcEEEEECCCCCcceEE-Eccc-CCcccccccCCCCCCEEEEEe--------CCcEEEEec
Confidence 478899999999999999888999999877 432 2221 356788889999999998887 368999999
Q ss_pred CCCcEEEEeecCCc-----------------eEEEEEeCC--eEEEEE-CC-----------------------------
Q 022387 164 HQSRCIGELSFRSE-----------------VRSVKLRRD--RIIVVL-EQ----------------------------- 194 (298)
Q Consensus 164 ~~~~~~~~~~~~~~-----------------v~~v~~~~~--~l~v~~-~~----------------------------- 194 (298)
.+++.......... +..+.|+++ .++++. ++
T Consensus 180 ~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~ 259 (741)
T 2ecf_A 180 ASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDA 259 (741)
T ss_dssp TTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSC
T ss_pred CCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCC
Confidence 98876544332221 466889875 455543 22
Q ss_pred ----eEEEEEcCC-CeEEEEEeccCCCcceEEEEeCCCCeEEEEec----CCCceEEEEEcCCcceE-eeccccc----c
Q 022387 195 ----KIFVYNFAD-LKLLHQIETIANPKGLCAVSQGVGSLVLVCPG----LQKGQVRVEHYASKRTK-FIMAHDS----R 260 (298)
Q Consensus 195 ----~I~iwd~~~-~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sG----s~dg~v~i~~~~~~~~~-~~~~H~~----~ 260 (298)
.|++||+.+ ++.............+..+++ +|+..|++.+ ..++.|.+||..+.... .+..|.. .
T Consensus 260 ~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~ 338 (741)
T 2ecf_A 260 NVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPL 338 (741)
T ss_dssp CCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCC
T ss_pred CCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCc
Confidence 788899987 765433222112223334445 5557776533 24678888999877654 3444443 5
Q ss_pred eeEEEECCCCCEEEEEeCCCCEEEEEECC-CCc
Q 022387 261 IACFALTQDGQLLATSSTKGTLVRIFNTL-DGT 292 (298)
Q Consensus 261 V~~l~fspdg~~lAt~S~Dgt~IrIWd~~-tg~ 292 (298)
+.+++|+|||+++++++.||. ++||.+. +++
T Consensus 339 ~~~~~~spdg~~~~~~~~~g~-~~l~~~~~~~~ 370 (741)
T 2ecf_A 339 HNSLRFLDDGSILWSSERTGF-QHLYRIDSKGK 370 (741)
T ss_dssp CSCCEECTTSCEEEEECTTSS-CEEEEECSSSC
T ss_pred CCceEECCCCeEEEEecCCCc-cEEEEEcCCCC
Confidence 679999999999999999998 9999876 444
No 147
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.60 E-value=3.1e-14 Score=139.13 Aligned_cols=198 Identities=12% Similarity=0.053 Sum_probs=138.2
Q ss_pred CCeEEEEEcCCCCEEEEEcCCeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCC
Q 022387 86 PTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ 165 (298)
Q Consensus 86 ~~V~~v~fs~dg~~lasgs~~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~ 165 (298)
..|.+++|||| .+++.+.++.+++||+.+.+...... +...+..+.+++++..++++. +++|++||+.+
T Consensus 82 ~~v~~~~~spd-~~~~~~~~~~i~~~d~~~~~~~~l~~--~~~~~~~~~~SpdG~~la~~~--------~~~i~v~~~~~ 150 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFTQGGLVGFDMLARKVTYLFD--TNEETASLDFSPVGDRVAYVR--------NHNLYIARGGK 150 (706)
T ss_dssp CCCEEEEETTT-TEEEEEETTEEEEEETTTTEEEEEEC--CTTCCTTCEECTTSSEEEEEE--------TTEEEEEECBC
T ss_pred cCceeEEECCC-CeEEEEECCEEEEEECCCCceEEccC--CcccccCCcCCCCCCEEEEEE--------CCeEEEEecCc
Confidence 47999999999 77776677889999998876533332 345667778899999988864 58899999998
Q ss_pred -----CcEEEEeecCCc---------------eEEEEEeCC--eEEEEE-------------------------------
Q 022387 166 -----SRCIGELSFRSE---------------VRSVKLRRD--RIIVVL------------------------------- 192 (298)
Q Consensus 166 -----~~~~~~~~~~~~---------------v~~v~~~~~--~l~v~~------------------------------- 192 (298)
++.......... +.++.|+++ .++++.
T Consensus 151 ~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~ 230 (706)
T 2z3z_A 151 LGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGT 230 (706)
T ss_dssp TTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTS
T ss_pred ccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCC
Confidence 776544333222 478889875 455543
Q ss_pred ---CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEecCCC-----ceEEEEEcCCc-ceEeec--cccc--
Q 022387 193 ---EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQK-----GQVRVEHYASK-RTKFIM--AHDS-- 259 (298)
Q Consensus 193 ---~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs~d-----g~v~i~~~~~~-~~~~~~--~H~~-- 259 (298)
+..|++||+.+++................+.+++|+..|++ ++.+ ..|.+||..+. ....+. .+..
T Consensus 231 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~-~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~ 309 (706)
T 2z3z_A 231 PSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYV-AEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYV 309 (706)
T ss_dssp CCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEE-EEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCC
T ss_pred CCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEE-EEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeE
Confidence 14799999988876443322122233445566666777775 3444 38888999877 444333 2222
Q ss_pred -ceeEEEECC--CCCEEEEEeCCCCEEEEEECC-CCcEEEe
Q 022387 260 -RIACFALTQ--DGQLLATSSTKGTLVRIFNTL-DGTLLQE 296 (298)
Q Consensus 260 -~V~~l~fsp--dg~~lAt~S~Dgt~IrIWd~~-tg~~l~~ 296 (298)
.+.+++|+| ||++|++++.|+. ++||++. +++++++
T Consensus 310 ~~~~~~~~sp~~dg~~l~~~~~~g~-~~l~~~~~~~~~~~~ 349 (706)
T 2z3z_A 310 EPLHPLTFLPGSNNQFIWQSRRDGW-NHLYLYDTTGRLIRQ 349 (706)
T ss_dssp CCCSCCEECTTCSSEEEEEECTTSS-CEEEEEETTSCEEEE
T ss_pred CccCCceeecCCCCEEEEEEccCCc-cEEEEEECCCCEEEe
Confidence 357899999 9999999999999 9999987 6666554
No 148
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.59 E-value=1.7e-13 Score=127.21 Aligned_cols=199 Identities=12% Similarity=0.087 Sum_probs=132.7
Q ss_pred CCCCCeEEEEEcCCCCEEE----EEcCCe-EEEEEcCCC--------ceEEE-Eee-ecCCceEEEEEecC-CCEEEEEe
Q 022387 83 SPPPTLLHISFNQDHGCFA----AGTDHG-FRIYNCDPF--------REIFR-RDF-ERGGGIGVVEMLFR-CNILALVG 146 (298)
Q Consensus 83 ~~~~~V~~v~fs~dg~~la----sgs~~g-i~vw~~~~~--------~~~~~-~~~-~~~~~~~~~~~~~~-~~~~~~~~ 146 (298)
.++..|++++|+|||++|| +|+.++ ++|||+.+. +.+.. ..+ .|...+..+.|+++ +..+++++
T Consensus 90 ~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s 169 (434)
T 2oit_A 90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL 169 (434)
T ss_dssp CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE
T ss_pred cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE
Confidence 3456899999999999999 677655 889998653 11111 111 15677888899887 67788777
Q ss_pred CCCCCCCCCCeEEEEeCCCCcEEEEee-cCCceEEEEEeCC--eEEEEE-CCeEEEEEcCCCeEEEEEeccCC-----Cc
Q 022387 147 GGPDPQYPLNKVMIWDDHQSRCIGELS-FRSEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIETIAN-----PK 217 (298)
Q Consensus 147 ~~~~~~~~d~~v~iWD~~~~~~~~~~~-~~~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~-----~~ 217 (298)
.|++|++||++++..+.... +...|.+++|+++ .++++. +++|++||++ ++...++..+.. ..
T Consensus 170 -------~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~ 241 (434)
T 2oit_A 170 -------ADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPV 241 (434)
T ss_dssp -------TTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCE
T ss_pred -------CCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCce
Confidence 68999999999986654433 4568999999874 566555 5899999998 566666655432 23
Q ss_pred ceEEEEeCCCCeEEEEecCCCce------EEEEEcCCcc---eEeeccc----------ccceeEEEECCCCCEEEEEeC
Q 022387 218 GLCAVSQGVGSLVLVCPGLQKGQ------VRVEHYASKR---TKFIMAH----------DSRIACFALTQDGQLLATSST 278 (298)
Q Consensus 218 ~~~~~s~~~d~~~la~sGs~dg~------v~i~~~~~~~---~~~~~~H----------~~~V~~l~fspdg~~lAt~S~ 278 (298)
.+.++++++++.++++.+..+|. +++|++.... ...+..+ ..+-..+.+-++.+++..+|.
T Consensus 242 ~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~ 321 (434)
T 2oit_A 242 RVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASA 321 (434)
T ss_dssp EEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEET
T ss_pred eEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecC
Confidence 66777887777888765555543 7789986542 1122211 122223333377777766665
Q ss_pred CCCEEEEEECC
Q 022387 279 KGTLVRIFNTL 289 (298)
Q Consensus 279 Dgt~IrIWd~~ 289 (298)
..+.|.|....
T Consensus 322 ~s~dv~vl~~~ 332 (434)
T 2oit_A 322 ASTEVSILARQ 332 (434)
T ss_dssp TCSBCEEEEEC
T ss_pred CCCceeEEEec
Confidence 44447777754
No 149
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.59 E-value=1.7e-13 Score=121.29 Aligned_cols=190 Identities=8% Similarity=0.015 Sum_probs=130.6
Q ss_pred EEEEcCCCCEEEEEcC-CeEEEEEcCCCceEEEEeeecCC--ceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCC
Q 022387 90 HISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFERGG--GIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQS 166 (298)
Q Consensus 90 ~v~fs~dg~~lasgs~-~gi~vw~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~ 166 (298)
++++++++.++++++. +.+.+||..+.+....... .. ....+.+.++++.++++.. .++.|.+||+.++
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~~~s~dg~~~~v~~~------~~~~i~~~d~~t~ 75 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVM--PDKFGPGTAMMAPDNRTAYVLNN------HYGDIYGIDLDTC 75 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEEC--SSCCSSCEEEECTTSSEEEEEET------TTTEEEEEETTTT
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEec--CCCCCCceeEECCCCCEEEEEeC------CCCcEEEEeCCCC
Confidence 4567888988888876 5688999998877655554 33 4667778888876666653 3588999999999
Q ss_pred cEEEEeecCC-------ceEEEEEeCC--eEEEEE-------------CCeEEEEEcCCCe---EEEEEeccCCCcceEE
Q 022387 167 RCIGELSFRS-------EVRSVKLRRD--RIIVVL-------------EQKIFVYNFADLK---LLHQIETIANPKGLCA 221 (298)
Q Consensus 167 ~~~~~~~~~~-------~v~~v~~~~~--~l~v~~-------------~~~I~iwd~~~~~---~i~~~~~~~~~~~~~~ 221 (298)
+.+..+.... .+..+.|+++ .++++. .+.|.+||+.+++ .+..+..+. .+..++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-~~~~~~ 154 (349)
T 1jmx_B 76 KNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPR-QVYLMR 154 (349)
T ss_dssp EEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCS-SCCCEE
T ss_pred cEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCC-ccccee
Confidence 8887776533 2677888875 455554 3899999998743 334444332 244455
Q ss_pred EEeCCCCeEEEEecCCCceEEEEEcCCcceE-eeccc-------------------------------------------
Q 022387 222 VSQGVGSLVLVCPGLQKGQVRVEHYASKRTK-FIMAH------------------------------------------- 257 (298)
Q Consensus 222 ~s~~~d~~~la~sGs~dg~v~i~~~~~~~~~-~~~~H------------------------------------------- 257 (298)
++++ +.+++ ++ +.|.+||..+.... .+..+
T Consensus 155 ~s~d--g~l~~--~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 228 (349)
T 1jmx_B 155 AADD--GSLYV--AG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPAT 228 (349)
T ss_dssp ECTT--SCEEE--ES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CC
T ss_pred ECCC--CcEEE--cc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccc
Confidence 5554 45444 23 23888988665432 33222
Q ss_pred -------------------------ccceeEEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 258 -------------------------DSRIACFALTQ-DGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 258 -------------------------~~~V~~l~fsp-dg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
...+..++|+| ||++|+++ ++. |++||+.+++.++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~-v~~~d~~~~~~~~~~ 291 (349)
T 1jmx_B 229 ADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNR-LAKYDLKQRKLIKAA 291 (349)
T ss_dssp CEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESE-EEEEETTTTEEEEEE
T ss_pred cccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCe-EEEEECccCeEEEEE
Confidence 12456788899 99999998 777 999999999887653
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.58 E-value=5.8e-14 Score=137.20 Aligned_cols=194 Identities=9% Similarity=0.052 Sum_probs=130.5
Q ss_pred CeEEEEEcCCCCEEEEEcCCeEEEEEcCCCce--EEEEeeec---------------CCceEEEEEecCCCEEEEEeCCC
Q 022387 87 TLLHISFNQDHGCFAAGTDHGFRIYNCDPFRE--IFRRDFER---------------GGGIGVVEMLFRCNILALVGGGP 149 (298)
Q Consensus 87 ~V~~v~fs~dg~~lasgs~~gi~vw~~~~~~~--~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~ 149 (298)
.+..+.|. |+.++.++.++| +||..+++. ........ ...+..+.++++ ..++++.
T Consensus 27 ~~~~~~w~--g~~~~~~~~~~i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~--- 99 (706)
T 2z3z_A 27 YVVGLQWM--GDNYVFIEGDDL-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT--- 99 (706)
T ss_dssp -CTTCEEE--TTEEEEEETTEE-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEE---
T ss_pred cCCCCcCc--CCeEEEEeCCcE-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEE---
Confidence 45557888 666666667778 999988765 22222100 035777888888 6666655
Q ss_pred CCCCCCCeEEEEeCCCCcEEEEeecCCceEEEEEeCC--eEEEEECCeEEEEEcCC-----CeEEEEEeccCCCc-----
Q 022387 150 DPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRD--RIIVVLEQKIFVYNFAD-----LKLLHQIETIANPK----- 217 (298)
Q Consensus 150 ~~~~~d~~v~iWD~~~~~~~~~~~~~~~v~~v~~~~~--~l~v~~~~~I~iwd~~~-----~~~i~~~~~~~~~~----- 217 (298)
+++|++||+.+++..........+.++.|+++ .++.+.++.|++||+.+ ++.......+...+
T Consensus 100 -----~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~ 174 (706)
T 2z3z_A 100 -----QGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQA 174 (706)
T ss_dssp -----TTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEEETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSC
T ss_pred -----CCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEEECCeEEEEecCcccccCCCcEEeccCCCCCeEcccc
Confidence 48899999999877665555567888889875 56666789999999987 66543322222211
Q ss_pred -------ceEEEEeCCCCeEEEEec--------------------------------CCCceEEEEEcCCcceEeec---
Q 022387 218 -------GLCAVSQGVGSLVLVCPG--------------------------------LQKGQVRVEHYASKRTKFIM--- 255 (298)
Q Consensus 218 -------~~~~~s~~~d~~~la~sG--------------------------------s~dg~v~i~~~~~~~~~~~~--- 255 (298)
....+.+++|+..|++.. ..++.|.+|+..+.....+.
T Consensus 175 ~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~ 254 (706)
T 2z3z_A 175 VHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGE 254 (706)
T ss_dssp CGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCS
T ss_pred hhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCC
Confidence 013344555668887633 14467888999877654332
Q ss_pred ccccceeEEEECCCCCEEEEEeCCC-----CEEEEEECCCCcE
Q 022387 256 AHDSRIACFALTQDGQLLATSSTKG-----TLVRIFNTLDGTL 293 (298)
Q Consensus 256 ~H~~~V~~l~fspdg~~lAt~S~Dg-----t~IrIWd~~tg~~ 293 (298)
.|...|.+++|+|||++|++++.|+ + |++||+.+|+.
T Consensus 255 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~-v~~~d~~~g~~ 296 (706)
T 2z3z_A 255 PKEKFLTNLSWSPDENILYVAEVNRAQNECK-VNAYDAETGRF 296 (706)
T ss_dssp CTTCEEEEEEECTTSSEEEEEEECTTSCEEE-EEEEETTTCCE
T ss_pred CCceeEeeEEEECCCCEEEEEEeCCCCCeeE-EEEEECCCCce
Confidence 5778899999999999999988776 7 99999999943
No 151
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.58 E-value=4.6e-13 Score=115.02 Aligned_cols=176 Identities=10% Similarity=-0.009 Sum_probs=125.1
Q ss_pred CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCC-CcEEEEeecC--CceEEEE
Q 022387 106 HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ-SRCIGELSFR--SEVRSVK 182 (298)
Q Consensus 106 ~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~-~~~~~~~~~~--~~v~~v~ 182 (298)
..+++|++.+.+...... |...+..+.+++++..+++++ ++.|++||+.+ ++........ ..+.++.
T Consensus 22 ~~i~~~d~~~~~~~~~~~--~~~~v~~~~~spdg~~l~~~~--------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 91 (297)
T 2ojh_A 22 SSIEIFNIRTRKMRVVWQ--TPELFEAPNWSPDGKYLLLNS--------EGLLYRLSLAGDPSPEKVDTGFATICNNDHG 91 (297)
T ss_dssp EEEEEEETTTTEEEEEEE--ESSCCEEEEECTTSSEEEEEE--------TTEEEEEESSSCCSCEECCCTTCCCBCSCCE
T ss_pred eeEEEEeCCCCceeeecc--CCcceEeeEECCCCCEEEEEc--------CCeEEEEeCCCCCCceEeccccccccccceE
Confidence 348899998877654443 477899999999999888865 47899999999 8776555444 4677888
Q ss_pred EeCC--eEEEEEC-----CeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEecCCCceEEEEEc--CCcceEe
Q 022387 183 LRRD--RIIVVLE-----QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHY--ASKRTKF 253 (298)
Q Consensus 183 ~~~~--~l~v~~~-----~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~--~~~~~~~ 253 (298)
|+++ .++++.. ..|..|++.+.+ ...+..+. . ...+.+++++..+++++..++.+.+|++ .......
T Consensus 92 ~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~-~--~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~ 167 (297)
T 2ojh_A 92 ISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNL-P--SYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETR 167 (297)
T ss_dssp ECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSS-S--EEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEE
T ss_pred ECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCC-C--ccceEECCCCCEEEEEECCCCceEEEEEECCCCcceE
Confidence 9875 4555551 355555555544 33443332 2 3444556666777766888999999885 4455667
Q ss_pred ecccccceeEEEECCCCCEEEEEe-CCCCEEEEEECC-CCcEEEe
Q 022387 254 IMAHDSRIACFALTQDGQLLATSS-TKGTLVRIFNTL-DGTLLQE 296 (298)
Q Consensus 254 ~~~H~~~V~~l~fspdg~~lAt~S-~Dgt~IrIWd~~-tg~~l~~ 296 (298)
+..|...+.+++|+|+|++|+.++ .|+. ++||++. .+..+.+
T Consensus 168 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~-~~i~~~~~~~~~~~~ 211 (297)
T 2ojh_A 168 LTHGEGRNDGPDYSPDGRWIYFNSSRTGQ-MQIWRVRVDGSSVER 211 (297)
T ss_dssp CCCSSSCEEEEEECTTSSEEEEEECTTSS-CEEEEEETTSSCEEE
T ss_pred cccCCCccccceECCCCCEEEEEecCCCC-ccEEEECCCCCCcEE
Confidence 788889999999999999888776 5888 9999986 4444443
No 152
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.57 E-value=1.1e-12 Score=115.44 Aligned_cols=183 Identities=9% Similarity=-0.011 Sum_probs=129.8
Q ss_pred CEEEEEcC-CeEEEEEcCCCceEEEEeeecCC---ceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCCcEEEEee
Q 022387 98 GCFAAGTD-HGFRIYNCDPFREIFRRDFERGG---GIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELS 173 (298)
Q Consensus 98 ~~lasgs~-~gi~vw~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~~~~~~~ 173 (298)
++|++++. +.+.+||..+.+.+..... .+ ....+.+++++..++++.. .++.|.+||+.+++.+..+.
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~~~~s~dg~~l~v~~~------~~~~v~~~d~~~~~~~~~~~ 73 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITI--ADAGPTPMVPMVAPGGRIAYATVN------KSESLVKIDLVTGETLGRID 73 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEEC--TTCTTCCCCEEECTTSSEEEEEET------TTTEEEEEETTTCCEEEEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEc--CCCCCCccceEEcCCCCEEEEEeC------CCCeEEEEECCCCCeEeeEE
Confidence 46777766 6688999998877655554 33 4677888888877766653 35889999999999887777
Q ss_pred cCC------ceEEEEEeCC--eEEEEE-------------CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEE
Q 022387 174 FRS------EVRSVKLRRD--RIIVVL-------------EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLV 232 (298)
Q Consensus 174 ~~~------~v~~v~~~~~--~l~v~~-------------~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la 232 (298)
... .+..+.++++ .++++. ++.|.+||+.+++.+..+..... ...++++++ +.+++
T Consensus 74 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~-~~~~~~s~d--g~~l~ 150 (337)
T 1pby_B 74 LSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQ-ITMLAWARD--GSKLY 150 (337)
T ss_dssp CCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSS-CCCEEECTT--SSCEE
T ss_pred cCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCC-cceeEECCC--CCEEE
Confidence 543 5677888865 455553 48999999999988888776433 334555554 46555
Q ss_pred EecCCCceEEEEEcCCcceE-eec--------------------------------------------------------
Q 022387 233 CPGLQKGQVRVEHYASKRTK-FIM-------------------------------------------------------- 255 (298)
Q Consensus 233 ~sGs~dg~v~i~~~~~~~~~-~~~-------------------------------------------------------- 255 (298)
++ ++.|.+|+..+.... .+.
T Consensus 151 ~~---~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~ 227 (337)
T 1pby_B 151 GL---GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLE 227 (337)
T ss_dssp EE---SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETT
T ss_pred Ee---CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCC
Confidence 42 577888887654322 111
Q ss_pred ----------ccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 256 ----------AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 256 ----------~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
.|...+.+++|+|||++|+++ |+. |++||+.+++.+..+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~-v~~~d~~~~~~~~~~ 276 (337)
T 1pby_B 228 TGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNV-LESFDLEKNASIKRV 276 (337)
T ss_dssp TCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESE-EEEEETTTTEEEEEE
T ss_pred CCCceEeecCCCCCceeeEEECCCCCEEEEe--CCe-EEEEECCCCcCccee
Confidence 122345679999999999988 687 999999999887653
No 153
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.57 E-value=1e-13 Score=141.69 Aligned_cols=193 Identities=10% Similarity=-0.102 Sum_probs=144.8
Q ss_pred CeEEEEEc-CCCCEEEEEcCCeEEEEEcCCCceEEEEeeecCC-ceEEEEEecCCCEEEEEeCCCCCCCCCCeEE-EEeC
Q 022387 87 TLLHISFN-QDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGG-GIGVVEMLFRCNILALVGGGPDPQYPLNKVM-IWDD 163 (298)
Q Consensus 87 ~V~~v~fs-~dg~~lasgs~~gi~vw~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~-iWD~ 163 (298)
.|.+++|+ |||++||+++++.+.+|+........ ... +.+ .+..+.++ ++..+++++ .+..+. +||+
T Consensus 297 ~v~~~~~S~pdG~~la~~~~~~i~~~~~~~~~~~~-~~~-~~~~~~~~~~~s-dg~~l~~~s-------~~~~l~~~~d~ 366 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLK-VPE-PLRIRYVRRGGD-TKVAFIHGT-------REGDFLGIYDY 366 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEETTEEEEECTTSSBEEE-CSC-CSCEEEEEECSS-SEEEEEEEE-------TTEEEEEEEET
T ss_pred ccceeeecCCCCCEEEEEEcCEEEEEcCCCCceEE-ccC-CCcceEEeeeEc-CCCeEEEEE-------CCCceEEEEEC
Confidence 58899999 99999999988888899987765432 211 233 45556666 666777777 346788 8899
Q ss_pred CCCcEEEEeecCCceEEEEEeCC--eEEEEE-CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEecCC---
Q 022387 164 HQSRCIGELSFRSEVRSVKLRRD--RIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQ--- 237 (298)
Q Consensus 164 ~~~~~~~~~~~~~~v~~v~~~~~--~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs~--- 237 (298)
.+++......+...+..+.|+++ .++++. ++.|++||+.+++....+..|...+..+++++ |+.+|++++..
T Consensus 367 ~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~Sp--DG~~la~~~~~~~~ 444 (1045)
T 1k32_A 367 RTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISD--NSRFIAYGFPLKHG 444 (1045)
T ss_dssp TTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECT--TSCEEEEEEEECSS
T ss_pred CCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECC--CCCeEEEEecCccc
Confidence 88765443333357889999986 355444 47999999999888777666766666666665 45777764332
Q ss_pred ------CceEEEEEcCCcceEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCc
Q 022387 238 ------KGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGT 292 (298)
Q Consensus 238 ------dg~v~i~~~~~~~~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~ 292 (298)
++.|++|+..+.....+..|...+.+++|+|||++|+.++.++. .++|+.....
T Consensus 445 ~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~-~~~~~~~~~~ 504 (1045)
T 1k32_A 445 ETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSL-DPSPDRVVLN 504 (1045)
T ss_dssp TTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCC-CCEECSSSSC
T ss_pred cccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEecccC-CcCcchhccc
Confidence 25899999988877788899999999999999999999999998 8999876543
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.56 E-value=2.1e-12 Score=115.84 Aligned_cols=199 Identities=13% Similarity=0.083 Sum_probs=124.8
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCC-----eEEEEEcCCC--ceEEEEeee-cCCceEEEEEecCCCEEEEEeCCCCCCCCC
Q 022387 84 PPPTLLHISFNQDHGCFAAGTDH-----GFRIYNCDPF--REIFRRDFE-RGGGIGVVEMLFRCNILALVGGGPDPQYPL 155 (298)
Q Consensus 84 ~~~~V~~v~fs~dg~~lasgs~~-----gi~vw~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 155 (298)
+...+..++|+|||++|++++.+ .+.+|+++.. +........ +......+.+ ++..++++.. .+
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~------~~ 119 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANY------SG 119 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEET------TT
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEEC------CC
Confidence 34466779999999999988773 6889998764 322222221 1233444444 7777776663 36
Q ss_pred CeEEEEeCCCCcEEEE----eec-----------CCceEEEEEeCCe--EEEEE--CCeEEEEEcCCCe-------EE--
Q 022387 156 NKVMIWDDHQSRCIGE----LSF-----------RSEVRSVKLRRDR--IIVVL--EQKIFVYNFADLK-------LL-- 207 (298)
Q Consensus 156 ~~v~iWD~~~~~~~~~----~~~-----------~~~v~~v~~~~~~--l~v~~--~~~I~iwd~~~~~-------~i-- 207 (298)
++|.+|++.....+.. +.+ ...+.++.|+++. ++++. ++.|++|++.... +.
T Consensus 120 ~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~ 199 (361)
T 3scy_A 120 GSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTK 199 (361)
T ss_dssp TEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEE
T ss_pred CEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeec
Confidence 8999999975433221 111 1234778998763 55554 4799999986432 11
Q ss_pred ---EEEeccCCCcceEEEEeCCCCeEEEEecCCCceEEEEEcCCcceE---e---ecccccceeEEEECCCCCEEEEEeC
Q 022387 208 ---HQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTK---F---IMAHDSRIACFALTQDGQLLATSST 278 (298)
Q Consensus 208 ---~~~~~~~~~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~~~~---~---~~~H~~~V~~l~fspdg~~lAt~S~ 278 (298)
..+... .......+.+++|+.++++++..++.|.+|++....+. . ...+...+..|+|+|||++|+.+..
T Consensus 200 ~~~~~~~~~-~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~ 278 (361)
T 3scy_A 200 GTPEAFKVA-PGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNR 278 (361)
T ss_dssp EEEEEEECC-TTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEEC
T ss_pred ccccceecC-CCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECC
Confidence 122221 11223344555666766665667899999998765432 2 2334456789999999998876665
Q ss_pred C--CCEEEEEECC--CCc
Q 022387 279 K--GTLVRIFNTL--DGT 292 (298)
Q Consensus 279 D--gt~IrIWd~~--tg~ 292 (298)
+ ++ |+||++. +|+
T Consensus 279 ~~~~~-i~v~~~~~~~g~ 295 (361)
T 3scy_A 279 LKADG-VAIFKVDETNGT 295 (361)
T ss_dssp SSSCE-EEEEEECTTTCC
T ss_pred CCCCE-EEEEEEcCCCCc
Confidence 4 77 9999995 555
No 155
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.55 E-value=1.8e-12 Score=117.05 Aligned_cols=207 Identities=10% Similarity=0.054 Sum_probs=126.4
Q ss_pred CeEEEEEcCCCCEEEEEcCCeEEEEEcC-CCceEEEEeeecCCceEEEEEecCCCEE-EEEeC-CCCCCC------CCCe
Q 022387 87 TLLHISFNQDHGCFAAGTDHGFRIYNCD-PFREIFRRDFERGGGIGVVEMLFRCNIL-ALVGG-GPDPQY------PLNK 157 (298)
Q Consensus 87 ~V~~v~fs~dg~~lasgs~~gi~vw~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~------~d~~ 157 (298)
.+..++|+|||++|++++.+.+.+|+++ +++..........+....+.++++++.+ +.+.. +.-..+ .+++
T Consensus 41 ~~~~~a~spdg~~l~~~~~~~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~ 120 (365)
T 1jof_A 41 PISWMTFDHERKNIYGAAMKKWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGY 120 (365)
T ss_dssp CCSEEEECTTSSEEEEEEBTEEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCE
T ss_pred CCcEEEECCCCCEEEEEccceEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCce
Confidence 5678999999999988887788999997 6554322221001222334455566642 22221 000000 2588
Q ss_pred EEEEeCC-CCcEEEEee-----cCCceEEEEEeCCe--EEEEE--CCeEEEEEcC-CCeEE--EEEeccCCCcceEEEEe
Q 022387 158 VMIWDDH-QSRCIGELS-----FRSEVRSVKLRRDR--IIVVL--EQKIFVYNFA-DLKLL--HQIETIANPKGLCAVSQ 224 (298)
Q Consensus 158 v~iWD~~-~~~~~~~~~-----~~~~v~~v~~~~~~--l~v~~--~~~I~iwd~~-~~~~i--~~~~~~~~~~~~~~~s~ 224 (298)
+++|++. .++....+. ....+.++.|+++. ++++. ++.|++||+. +++.. ..+...........+.+
T Consensus 121 v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~ 200 (365)
T 1jof_A 121 GNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAM 200 (365)
T ss_dssp EEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEE
T ss_pred EEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEE
Confidence 9999997 465544333 23478889999863 55544 3699999997 66543 33332111122334445
Q ss_pred CCCCeEEEEecCCCceEEEEEcC--CcceE-------eec----cccc------ceeEEE-ECCCCCEEEEEeCCC----
Q 022387 225 GVGSLVLVCPGLQKGQVRVEHYA--SKRTK-------FIM----AHDS------RIACFA-LTQDGQLLATSSTKG---- 280 (298)
Q Consensus 225 ~~d~~~la~sGs~dg~v~i~~~~--~~~~~-------~~~----~H~~------~V~~l~-fspdg~~lAt~S~Dg---- 280 (298)
++|+.++++++..++.|.+|+++ +..+. .+. +|.. .+..++ |+|||++|++++.+.
T Consensus 201 spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~ 280 (365)
T 1jof_A 201 HPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFEL 280 (365)
T ss_dssp CTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTS
T ss_pred CCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCC
Confidence 55667776556668899998765 23221 121 2333 589999 999999887775433
Q ss_pred --CEEEEEECC-CCcEE
Q 022387 281 --TLVRIFNTL-DGTLL 294 (298)
Q Consensus 281 --t~IrIWd~~-tg~~l 294 (298)
+ |+||++. +|++.
T Consensus 281 ~~~-i~v~~~~~~g~~~ 296 (365)
T 1jof_A 281 QGY-IAGFKLRDCGSIE 296 (365)
T ss_dssp CCE-EEEEEECTTSCEE
T ss_pred CCe-EEEEEECCCCCEE
Confidence 6 9999996 67653
No 156
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.54 E-value=1.9e-14 Score=140.98 Aligned_cols=204 Identities=8% Similarity=-0.011 Sum_probs=135.0
Q ss_pred EEEEcCCCCEEEEEcCCeEEEEEcCCCceEEEEeeecCC---ceEEEEEecCCCEEEEEeCCCCC--CCCCCeEEEEeCC
Q 022387 90 HISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGG---GIGVVEMLFRCNILALVGGGPDP--QYPLNKVMIWDDH 164 (298)
Q Consensus 90 ~v~fs~dg~~lasgs~~gi~vw~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~v~iWD~~ 164 (298)
.++|+|||++++++.++.+++|+..+++....... +.. .+..+.+++++..+++++..... ...+++|++||+.
T Consensus 20 ~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLHQSADNNIVLYNIETGQSYTILSN-RTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEEECTTSCEEEEESSSCCEEEEECH-HHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEcc-ccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 67999999888877767799999998876443331 111 26788899999999887731000 0015889999999
Q ss_pred CCcEEEEeecCCceEEEEEeCC--eEEEEECCeEEEEEcCCCeEEEEEec-cCCCcc---------------eEEEEeCC
Q 022387 165 QSRCIGELSFRSEVRSVKLRRD--RIIVVLEQKIFVYNFADLKLLHQIET-IANPKG---------------LCAVSQGV 226 (298)
Q Consensus 165 ~~~~~~~~~~~~~v~~v~~~~~--~l~v~~~~~I~iwd~~~~~~i~~~~~-~~~~~~---------------~~~~s~~~ 226 (298)
+++.+........+..+.|+++ .++.+.++.|++||+.+++..+.... +...+. ...+.++|
T Consensus 99 ~g~~~~~~~l~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP 178 (719)
T 1z68_A 99 NGEFVRGNELPRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSP 178 (719)
T ss_dssp TTEECCSSCCCSSBCCEEECSSTTCEEEEETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECT
T ss_pred CCccccceecCcccccceECCCCCEEEEEECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECC
Confidence 9876322233356788899885 57777789999999987765432211 111100 02445556
Q ss_pred CCeEEEEecCCC---------------------------------ceEEEEEcCCcce---------EeecccccceeEE
Q 022387 227 GSLVLVCPGLQK---------------------------------GQVRVEHYASKRT---------KFIMAHDSRIACF 264 (298)
Q Consensus 227 d~~~la~sGs~d---------------------------------g~v~i~~~~~~~~---------~~~~~H~~~V~~l 264 (298)
|+..||+....+ ..|.+|+..++.. ..+.+|...+.++
T Consensus 179 DG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (719)
T 1z68_A 179 NGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWL 258 (719)
T ss_dssp TSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEE
T ss_pred CCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEe
Confidence 668888633221 1677899887653 1234688899999
Q ss_pred EECCCCCEEEEEeCCC---CEEEEEE----CCCCcEE
Q 022387 265 ALTQDGQLLATSSTKG---TLVRIFN----TLDGTLL 294 (298)
Q Consensus 265 ~fspdg~~lAt~S~Dg---t~IrIWd----~~tg~~l 294 (298)
+|||||+++++....+ ..|.+|| +.+|++.
T Consensus 259 ~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~ 295 (719)
T 1z68_A 259 TWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCP 295 (719)
T ss_dssp EESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECC
T ss_pred EEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceE
Confidence 9999998888754221 1288899 7777653
No 157
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.53 E-value=2.8e-13 Score=132.51 Aligned_cols=202 Identities=10% Similarity=-0.031 Sum_probs=133.4
Q ss_pred CCCeEEEEEcCCCCEEEEEcCCeEEEEEcCCCceEEEEeeecCCce------------------EEEEEecCCCEEEEEe
Q 022387 85 PPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGI------------------GVVEMLFRCNILALVG 146 (298)
Q Consensus 85 ~~~V~~v~fs~dg~~lasgs~~gi~vw~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~ 146 (298)
...|..++|||||++||.++++.+.+|+.++.+....... +...+ ..+.|++++..+++++
T Consensus 113 ~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~~~~~~-~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~ 191 (723)
T 1xfd_A 113 NAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVST-GKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAA 191 (723)
T ss_dssp SCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEECC-CBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEE
T ss_pred cccccccEECCCCCEEEEEECCeEEEEECCCCceEEEecC-CCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEE
Confidence 3458899999999999999998899999988665333221 12222 5688999999888876
Q ss_pred CCCCC---------------------------CCCCCeEEEEeCCCCcEEEEeec-------CCceEEEEEeCCeEEE--
Q 022387 147 GGPDP---------------------------QYPLNKVMIWDDHQSRCIGELSF-------RSEVRSVKLRRDRIIV-- 190 (298)
Q Consensus 147 ~~~~~---------------------------~~~d~~v~iWD~~~~~~~~~~~~-------~~~v~~v~~~~~~l~v-- 190 (298)
..... ...+.+|++||+.+++....+.. ...+..+.|+++.-.+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~ 271 (723)
T 1xfd_A 192 INDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVT 271 (723)
T ss_dssp EECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEE
T ss_pred ECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEE
Confidence 32100 00123799999998876555543 2467889999875333
Q ss_pred EEC-----CeEEEEEcCCCeEEEEEecc-CCCcc----eEEEEeCCCCeEEEEe-cCCCc------eEEEEE-cCCcc--
Q 022387 191 VLE-----QKIFVYNFADLKLLHQIETI-ANPKG----LCAVSQGVGSLVLVCP-GLQKG------QVRVEH-YASKR-- 250 (298)
Q Consensus 191 ~~~-----~~I~iwd~~~~~~i~~~~~~-~~~~~----~~~~s~~~d~~~la~s-Gs~dg------~v~i~~-~~~~~-- 250 (298)
..+ ..|++||+.+++....+..+ ...+. .+++++++ ..|++. +..+| .|.+|+ ...+.
T Consensus 272 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg--~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~ 349 (723)
T 1xfd_A 272 WLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDG--RKFFFIRAIPQGGRGKFYHITVSSSQPNSSND 349 (723)
T ss_dssp EEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTS--CSEEEEEEECCSSSSCEEEEEEECSSCCSSSC
T ss_pred EEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCC--CeEEEEEecccCCCcceeEEEEEeccCCCCcc
Confidence 221 47999999888876655442 22222 45566554 555543 55666 455566 34444
Q ss_pred -eEeecccccceeE-EEECCCCCEEEEEeCC---CCEEEEEECCC
Q 022387 251 -TKFIMAHDSRIAC-FALTQDGQLLATSSTK---GTLVRIFNTLD 290 (298)
Q Consensus 251 -~~~~~~H~~~V~~-l~fspdg~~lAt~S~D---gt~IrIWd~~t 290 (298)
...+..+...+.. ++|||||++|+..+.+ ++ ++||++..
T Consensus 350 ~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~-~~l~~~~~ 393 (723)
T 1xfd_A 350 NIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRR-RQLYSANT 393 (723)
T ss_dssp CCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTC-CEEEEECS
T ss_pred ceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcc-eEEEEEeC
Confidence 4556544455554 7999999999877665 77 99999864
No 158
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.53 E-value=2.3e-13 Score=130.23 Aligned_cols=191 Identities=9% Similarity=0.055 Sum_probs=134.4
Q ss_pred CCeEEEEEcCCCCEEEEEcC----CeEEEEEcCC--CceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEE
Q 022387 86 PTLLHISFNQDHGCFAAGTD----HGFRIYNCDP--FREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (298)
Q Consensus 86 ~~V~~v~fs~dg~~lasgs~----~gi~vw~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~ 159 (298)
..|..++|+|| ++++++.. +..+||.++. .+...... .........++++++.++++++. ++.+.
T Consensus 65 ~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~~l~--~~~~~~~~~~s~dg~~~~~~s~~------~~~~~ 135 (582)
T 3o4h_A 65 NSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQRLE--AVKPMRILSGVDTGEAVVFTGAT------EDRVA 135 (582)
T ss_dssp SEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCEECT--TSCSBEEEEEEECSSCEEEEEEC------SSCEE
T ss_pred cccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCcccccc--CCCCceeeeeCCCCCeEEEEecC------CCCce
Confidence 57899999999 77776653 3467776654 33222222 23445577888998877666643 24455
Q ss_pred EEeCCCCcEEEEeecCCceEEEEEeCC--eEEEEE-C----CeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEE
Q 022387 160 IWDDHQSRCIGELSFRSEVRSVKLRRD--RIIVVL-E----QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLV 232 (298)
Q Consensus 160 iWD~~~~~~~~~~~~~~~v~~v~~~~~--~l~v~~-~----~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la 232 (298)
|||+.+++......... .++.|+++ .++.+. + ..|++||+.+++. +.+..+...+ ..+.+++|+..|+
T Consensus 136 l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~-~~l~~~~~~~--~~~~~SpDG~~l~ 210 (582)
T 3o4h_A 136 LYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGL-RVFDSGEGSF--SSASISPGMKVTA 210 (582)
T ss_dssp EEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCC-EEECCSSCEE--EEEEECTTSCEEE
T ss_pred EEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCc-eEeecCCCcc--ccceECCCCCEEE
Confidence 99999887655554444 66777764 455333 3 5799999987775 3565554444 4445556668888
Q ss_pred EecCCCc--eEEEEEcCCcceEeecccccceeEEE--------ECCCCCEEEEEeCCCCEEEEEECCCCcEE
Q 022387 233 CPGLQKG--QVRVEHYASKRTKFIMAHDSRIACFA--------LTQDGQLLATSSTKGTLVRIFNTLDGTLL 294 (298)
Q Consensus 233 ~sGs~dg--~v~i~~~~~~~~~~~~~H~~~V~~l~--------fspdg~~lAt~S~Dgt~IrIWd~~tg~~l 294 (298)
++..+| .|.+|+..++....+..|...|..++ |||||+++++++.|++ ++||++ |+++
T Consensus 211 -~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~-~~l~~~--g~~~ 278 (582)
T 3o4h_A 211 -GLETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGR-SAVFID--GERV 278 (582)
T ss_dssp -EEECSSCEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTE-EEEEET--TEEE
T ss_pred -EccCCCeeEEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCc-EEEEEE--CCee
Confidence 467788 78889998876667778888888888 9999999999999999 999999 7665
No 159
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.53 E-value=3.7e-13 Score=137.59 Aligned_cols=192 Identities=9% Similarity=0.092 Sum_probs=139.3
Q ss_pred CeEEEEEcCCCCEEEEEcCCeEEEEEcCCCceEEEEeee----------cCCceEEEEEe-cCCCEEEEEeCCCCCCCCC
Q 022387 87 TLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFE----------RGGGIGVVEML-FRCNILALVGGGPDPQYPL 155 (298)
Q Consensus 87 ~V~~v~fs~dg~~lasgs~~gi~vw~~~~~~~~~~~~~~----------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d 155 (298)
.+..++|+|||++||.+.+..+.+|+.+.... ...... +...+..+.++ +++..+++++ +
T Consensus 246 ~~~~~~~SpDG~~la~~~~~~i~~~d~~~~~l-~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~--------~ 316 (1045)
T 1k32_A 246 DYYPRHLNTDGRRILFSKGGSIYIFNPDTEKI-EKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS--------R 316 (1045)
T ss_dssp SSCEEEEEESSSCEEEEETTEEEEECTTTCCE-EECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE--------T
T ss_pred CcceeeEcCCCCEEEEEeCCEEEEecCCceEe-eeeccCcccccccccccccccceeeecCCCCCEEEEEE--------c
Confidence 46678999999999999888899999854332 222110 11246788889 9998888876 4
Q ss_pred CeEEEEeCCCCcEEEEeecCC-ceEEEEEeCCe--EEEEEC-CeEE-EEEcCCCeEEEEEeccCCCcceEEEEeCCCCeE
Q 022387 156 NKVMIWDDHQSRCIGELSFRS-EVRSVKLRRDR--IIVVLE-QKIF-VYNFADLKLLHQIETIANPKGLCAVSQGVGSLV 230 (298)
Q Consensus 156 ~~v~iWD~~~~~~~~~~~~~~-~v~~v~~~~~~--l~v~~~-~~I~-iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~ 230 (298)
+.|.+||...+.......+.. .+..+.|+ +. ++.+.+ ..+. +||+.+.+. ..+..+... ...+.+++|+.+
T Consensus 317 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~-~~l~~~~~~--~~~~~~SpDG~~ 392 (1045)
T 1k32_A 317 GQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKA-EKFEENLGN--VFAMGVDRNGKF 392 (1045)
T ss_dssp TEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCE-EECCCCCCS--EEEEEECTTSSE
T ss_pred CEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCc-eEecCCccc--eeeeEECCCCCE
Confidence 789999998877654333444 67788888 63 444443 5777 889876654 334433333 344555566688
Q ss_pred EEEecCCCceEEEEEcCCcceE-eecccccceeEEEECCCCCEEEEEeCCC----------CEEEEEECCCCcE
Q 022387 231 LVCPGLQKGQVRVEHYASKRTK-FIMAHDSRIACFALTQDGQLLATSSTKG----------TLVRIFNTLDGTL 293 (298)
Q Consensus 231 la~sGs~dg~v~i~~~~~~~~~-~~~~H~~~V~~l~fspdg~~lAt~S~Dg----------t~IrIWd~~tg~~ 293 (298)
||+ ++.++.|++|+..++... .+..|...|.+++|||||++||+++.++ . |+|||+.+++.
T Consensus 393 la~-~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~-i~l~d~~~g~~ 464 (1045)
T 1k32_A 393 AVV-ANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQA-IHVYDMEGRKI 464 (1045)
T ss_dssp EEE-EETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEE-EEEEETTTTEE
T ss_pred EEE-ECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCe-EEEEECCCCcE
Confidence 885 788899999999887665 4458999999999999999999998765 6 99999998873
No 160
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.51 E-value=2.3e-11 Score=108.96 Aligned_cols=201 Identities=10% Similarity=0.117 Sum_probs=127.7
Q ss_pred CCCeEEEEEcCCCCEEEEEcC--CeEEEEEcCCCceEE----EEeee---------cCCceEEEEEecCCCEEEEEeCCC
Q 022387 85 PPTLLHISFNQDHGCFAAGTD--HGFRIYNCDPFREIF----RRDFE---------RGGGIGVVEMLFRCNILALVGGGP 149 (298)
Q Consensus 85 ~~~V~~v~fs~dg~~lasgs~--~gi~vw~~~~~~~~~----~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~ 149 (298)
......+++ ||++|+++.. +.+.+|++...+.+. ..... +......+.+++++..++++..
T Consensus 99 ~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~-- 174 (361)
T 3scy_A 99 GADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDL-- 174 (361)
T ss_dssp SSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEET--
T ss_pred CCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeC--
Confidence 346777888 8888877763 458899987543221 11110 0112356788888887777663
Q ss_pred CCCCCCCeEEEEeCCCCc-------E-------EEEeecCCceEEEEEeCC--eEEEEE--CCeEEEEEcCCCeE--EEE
Q 022387 150 DPQYPLNKVMIWDDHQSR-------C-------IGELSFRSEVRSVKLRRD--RIIVVL--EQKIFVYNFADLKL--LHQ 209 (298)
Q Consensus 150 ~~~~~d~~v~iWD~~~~~-------~-------~~~~~~~~~v~~v~~~~~--~l~v~~--~~~I~iwd~~~~~~--i~~ 209 (298)
.++.|++|++.... . ...+.....+..+.|+++ .++++. ++.|.+|++.+++. +..
T Consensus 175 ----~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~ 250 (361)
T 3scy_A 175 ----GTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQT 250 (361)
T ss_dssp ----TTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEE
T ss_pred ----CCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEE
Confidence 35789999887533 1 112233346778999886 455665 47999999986654 333
Q ss_pred EeccCC-CcceEEEEeCCCCeEEEEecCC-CceEEEEEcC--CcceE---eecccccceeEEEECCCCCEEEEEe-CCCC
Q 022387 210 IETIAN-PKGLCAVSQGVGSLVLVCPGLQ-KGQVRVEHYA--SKRTK---FIMAHDSRIACFALTQDGQLLATSS-TKGT 281 (298)
Q Consensus 210 ~~~~~~-~~~~~~~s~~~d~~~la~sGs~-dg~v~i~~~~--~~~~~---~~~~H~~~V~~l~fspdg~~lAt~S-~Dgt 281 (298)
+..... ......+.+++|+.+|+++... ++.|.+|++. ..... .+.. ...+++++|+|||++|++++ .++.
T Consensus 251 ~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~ 329 (361)
T 3scy_A 251 VAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNV 329 (361)
T ss_dssp EESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTE
T ss_pred EecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCC
Confidence 333211 1223355555666777665666 7899999985 33322 3333 45789999999999988887 4566
Q ss_pred EEEEE--ECCCCcEEE
Q 022387 282 LVRIF--NTLDGTLLQ 295 (298)
Q Consensus 282 ~IrIW--d~~tg~~l~ 295 (298)
|+|| |..+|++..
T Consensus 330 -v~v~~~d~~~g~~~~ 344 (361)
T 3scy_A 330 -IQIFERDQATGLLTD 344 (361)
T ss_dssp -EEEEEECTTTCCEEE
T ss_pred -EEEEEEECCCCcEee
Confidence 9996 555777643
No 161
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.48 E-value=4.2e-12 Score=114.51 Aligned_cols=192 Identities=11% Similarity=-0.067 Sum_probs=124.6
Q ss_pred EEEcCCCCEEEEEcC-Ce---EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCC
Q 022387 91 ISFNQDHGCFAAGTD-HG---FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQS 166 (298)
Q Consensus 91 v~fs~dg~~lasgs~-~g---i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~ 166 (298)
.+|||||++||.+++ ++ +.+|++++.+....... +...+....+++++..++++. .++.|++||+.++
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~-~~~~~~~~~~spdg~~l~~~~-------~~~~l~~~d~~~g 112 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEG-RGDNTFGGFLSPDDDALFYVK-------DGRNLMRVDLATL 112 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCS-SCBCSSSCEECTTSSEEEEEE-------TTTEEEEEETTTC
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeC-CCCCccceEEcCCCCEEEEEe-------CCCeEEEEECCCC
Confidence 789999999998886 66 66778777654322221 122222356889999999888 4578999999998
Q ss_pred cEEEEeecCCc-eEEE--EEeCCe-EEEE------------------------ECCeEEEEEcCCCeEEEEEeccCCCcc
Q 022387 167 RCIGELSFRSE-VRSV--KLRRDR-IIVV------------------------LEQKIFVYNFADLKLLHQIETIANPKG 218 (298)
Q Consensus 167 ~~~~~~~~~~~-v~~v--~~~~~~-l~v~------------------------~~~~I~iwd~~~~~~i~~~~~~~~~~~ 218 (298)
+....+..+.. +... .++++. ++++ ....|.+||+.+++.. .+..+...+.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~-~l~~~~~~~~ 191 (388)
T 3pe7_A 113 EENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGEST-VILQENQWLG 191 (388)
T ss_dssp CEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEE-EEEEESSCEE
T ss_pred cceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceE-EeecCCcccc
Confidence 87665555443 2222 235442 2221 1257999999887653 4444444444
Q ss_pred eEEEEeCCCCeEEEEecCC-----CceEEEEEcCCcceEeecccc--cceeEEEECCCCCEEEEEeCC-----CCEEEEE
Q 022387 219 LCAVSQGVGSLVLVCPGLQ-----KGQVRVEHYASKRTKFIMAHD--SRIACFALTQDGQLLATSSTK-----GTLVRIF 286 (298)
Q Consensus 219 ~~~~s~~~d~~~la~sGs~-----dg~v~i~~~~~~~~~~~~~H~--~~V~~l~fspdg~~lAt~S~D-----gt~IrIW 286 (298)
...+++. |+..|++.... ...|.+++...+....+..+. ..+..++|||||+.||..+.+ .. |.+|
T Consensus 192 ~~~~sp~-dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~-l~~~ 269 (388)
T 3pe7_A 192 HPIYRPY-DDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRF-IYSA 269 (388)
T ss_dssp EEEEETT-EEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEE-EEEE
T ss_pred ccEECCC-CCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcce-EEEE
Confidence 5555550 45777653332 336777887776666666555 358899999999988765542 23 9999
Q ss_pred ECCCCcE
Q 022387 287 NTLDGTL 293 (298)
Q Consensus 287 d~~tg~~ 293 (298)
|+.+|+.
T Consensus 270 d~~~g~~ 276 (388)
T 3pe7_A 270 DPETLEN 276 (388)
T ss_dssp CTTTCCE
T ss_pred ecCCCce
Confidence 9999874
No 162
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.47 E-value=1.6e-12 Score=128.34 Aligned_cols=202 Identities=11% Similarity=0.053 Sum_probs=133.7
Q ss_pred CeEEEEEcCCCCEEEEEcCCeEEEEEcCCCceEEEEeeecCC---ceEE--EEEecCCCEEEEEeCCCCC--CCCCCeEE
Q 022387 87 TLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGG---GIGV--VEMLFRCNILALVGGGPDP--QYPLNKVM 159 (298)
Q Consensus 87 ~V~~v~fs~dg~~lasgs~~gi~vw~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~--~~~d~~v~ 159 (298)
...+++|+|||++|+++ ++.|++|++.+++....... |.. .+.. ..+++++..+++.+..... ....+.+.
T Consensus 18 ~~~~~~w~~dg~~~~~~-~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ-ENNILVFNAEYGNSSVFLEN-STFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp CCCCEEECSSSEEEEEE-TTEEEEEETTTCCEEEEECT-TTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred cccccEECCCCcEEEEc-CCcEEEEECCCCceEEEEec-hhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence 45579999999999998 77799999998876443332 111 1222 6778999988887731100 00115678
Q ss_pred EEeCCCCcEEEEeecCCceEEEEEeCC--eEEEEECCeEEEEEcCCCeEEEEEeccCCCcce-----------------E
Q 022387 160 IWDDHQSRCIGELSFRSEVRSVKLRRD--RIIVVLEQKIFVYNFADLKLLHQIETIANPKGL-----------------C 220 (298)
Q Consensus 160 iWD~~~~~~~~~~~~~~~v~~v~~~~~--~l~v~~~~~I~iwd~~~~~~i~~~~~~~~~~~~-----------------~ 220 (298)
+||+.+++......+...+....|+|+ .++.+.++.|++|++.+++..+ +......... .
T Consensus 96 ~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~-lt~~g~~~~~~~g~~~~v~~ee~~~~~~ 174 (740)
T 4a5s_A 96 IYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYR-ITWTGKEDIIYNGITDWVYEEEVFSAYS 174 (740)
T ss_dssp EEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEE-CCSCCBTTTEEESBCCHHHHHHTSSSSB
T ss_pred EEECCCCcEEEcccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCceEE-EcCCCCccceecCcccccccchhcCCCc
Confidence 999999886543344567889999985 5777778999999997776432 2211111101 1
Q ss_pred EEEeCCCCeEEEEecCC---------------------------------Cc--eEEEEEcCC---c---ceEeec----
Q 022387 221 AVSQGVGSLVLVCPGLQ---------------------------------KG--QVRVEHYAS---K---RTKFIM---- 255 (298)
Q Consensus 221 ~~s~~~d~~~la~sGs~---------------------------------dg--~v~i~~~~~---~---~~~~~~---- 255 (298)
++.++||+..||+.... +. .|.+|++++ + ....+.
T Consensus 175 ~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~ 254 (740)
T 4a5s_A 175 ALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPAS 254 (740)
T ss_dssp CEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHH
T ss_pred ceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCcc
Confidence 24455666877763211 11 567788887 5 444444
Q ss_pred --ccccceeEEEECCCCCEEEEEeC----CCCEEEEEECCCCc
Q 022387 256 --AHDSRIACFALTQDGQLLATSST----KGTLVRIFNTLDGT 292 (298)
Q Consensus 256 --~H~~~V~~l~fspdg~~lAt~S~----Dgt~IrIWd~~tg~ 292 (298)
+|...|..++|||||+++|.... +.. |++||+.+|+
T Consensus 255 ~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~-i~~~d~~tg~ 296 (740)
T 4a5s_A 255 MLIGDHYLCDVTWATQERISLQWLRRIQNYSV-MDICDYDESS 296 (740)
T ss_dssp HHTSCEEEEEEEEEETTEEEEEEEESSTTEEE-EEEEEEETTT
T ss_pred CCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEE-EEEEECCCCc
Confidence 38888999999999997776632 335 9999999987
No 163
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.47 E-value=6e-11 Score=102.73 Aligned_cols=194 Identities=12% Similarity=0.096 Sum_probs=127.6
Q ss_pred CCeEEEEE-cCCCCEEEEEc--CCeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEe
Q 022387 86 PTLLHISF-NQDHGCFAAGT--DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWD 162 (298)
Q Consensus 86 ~~V~~v~f-s~dg~~lasgs--~~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD 162 (298)
..+.++++ .++|++++++. ++.+++|+. ..+.+......+......+.+..+++.++... .++.|.+||
T Consensus 77 ~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-------~~~~i~~~~ 148 (286)
T 1q7f_A 77 LYPNRVAVVRNSGDIIVTERSPTHQIQIYNQ-YGQFVRKFGATILQHPRGVTVDNKGRIIVVEC-------KVMRVIIFD 148 (286)
T ss_dssp SSEEEEEEETTTTEEEEEECGGGCEEEEECT-TSCEEEEECTTTCSCEEEEEECTTSCEEEEET-------TTTEEEEEC
T ss_pred cCceEEEEEcCCCeEEEEcCCCCCEEEEECC-CCcEEEEecCccCCCceEEEEeCCCCEEEEEC-------CCCEEEEEc
Confidence 46889999 57888777774 567889983 34433322211123456667777776444433 357899999
Q ss_pred CCCCcEEEEeec---CCceEEEEEeCC-eEEEEE--CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEecC
Q 022387 163 DHQSRCIGELSF---RSEVRSVKLRRD-RIIVVL--EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGL 236 (298)
Q Consensus 163 ~~~~~~~~~~~~---~~~v~~v~~~~~-~l~v~~--~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs 236 (298)
.. ++.+..+.. ...+..++++++ .+.++. ++.|++||.. ++.+.++...........+..++++.++++ ..
T Consensus 149 ~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~-~~ 225 (286)
T 1q7f_A 149 QN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIA-DN 225 (286)
T ss_dssp TT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEE-EC
T ss_pred CC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEE-eC
Confidence 64 555555542 235788999875 444444 4799999974 556666654321123345555666677774 55
Q ss_pred CCc-eEEEEEcCCcceEeeccccc--ceeEEEECCCCCEEEEEeCCCCEEEEEECCCCc
Q 022387 237 QKG-QVRVEHYASKRTKFIMAHDS--RIACFALTQDGQLLATSSTKGTLVRIFNTLDGT 292 (298)
Q Consensus 237 ~dg-~v~i~~~~~~~~~~~~~H~~--~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~ 292 (298)
.++ .|.+|+.+.+.+..+..+.. .+.+|+|+|+|+++++ +.|++ |+||++....
T Consensus 226 ~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~-v~v~~~~~~~ 282 (286)
T 1q7f_A 226 HNNFNLTIFTQDGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYR-LYIYRYVQLA 282 (286)
T ss_dssp SSSCEEEEECTTSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTE-EEEEECSCCC
T ss_pred CCCEEEEEECCCCCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCe-EEEEEccccc
Confidence 565 99999977666666655543 4789999999998888 56888 9999987643
No 164
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.45 E-value=3.6e-11 Score=108.74 Aligned_cols=197 Identities=14% Similarity=0.180 Sum_probs=123.1
Q ss_pred EEEEcCCCCEEEEEc-----------CCeEEEEEcCCCceEEEEeee-----cCCceEEEEEecCCCEEEEEeCCCCCCC
Q 022387 90 HISFNQDHGCFAAGT-----------DHGFRIYNCDPFREIFRRDFE-----RGGGIGVVEMLFRCNILALVGGGPDPQY 153 (298)
Q Consensus 90 ~v~fs~dg~~lasgs-----------~~gi~vw~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (298)
.++|+|||++|+++. ++.+.+||..+.+........ +......+.+++++..++++..+
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~----- 128 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNAS----- 128 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEES-----
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCC-----
Confidence 799999999998875 234889999988776555431 01234456788889888887632
Q ss_pred CCCeEEEEeCCCCcEEEE-eecCCc---------------------eEEEEEeC--------------------------
Q 022387 154 PLNKVMIWDDHQSRCIGE-LSFRSE---------------------VRSVKLRR-------------------------- 185 (298)
Q Consensus 154 ~d~~v~iWD~~~~~~~~~-~~~~~~---------------------v~~v~~~~-------------------------- 185 (298)
.+++|.+||+.+++.+.+ +..... +..+.+..
T Consensus 129 ~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 208 (361)
T 2oiz_A 129 PATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPA 208 (361)
T ss_dssp SSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCE
T ss_pred CCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEec
Confidence 247899999999988777 543221 11111111
Q ss_pred ---CeEEEE-ECCeEEEEEcCCCe--EEEEEeccC--------CCc--ceEEEEeCCCCeEEEEecC----------CCc
Q 022387 186 ---DRIIVV-LEQKIFVYNFADLK--LLHQIETIA--------NPK--GLCAVSQGVGSLVLVCPGL----------QKG 239 (298)
Q Consensus 186 ---~~l~v~-~~~~I~iwd~~~~~--~i~~~~~~~--------~~~--~~~~~s~~~d~~~la~sGs----------~dg 239 (298)
..+++. .++.|.++|+...+ .+..+.... .+. ..+++++++...+++ .+ ..+
T Consensus 209 ~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~--~~~~~~~~~~~~~~~ 286 (361)
T 2oiz_A 209 LDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVF--MHPDGKEGTHKFPAA 286 (361)
T ss_dssp ECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEE--EESSCCTTCTTCCCS
T ss_pred ccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEE--EccCCCcccccCCCc
Confidence 011111 12455666653221 222221100 011 125666654333332 22 134
Q ss_pred eEEEEEcCCcce-EeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCC--cEEEec
Q 022387 240 QVRVEHYASKRT-KFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDG--TLLQEG 297 (298)
Q Consensus 240 ~v~i~~~~~~~~-~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg--~~l~~~ 297 (298)
.|.+||..+.+. .++..+. +..|+|+|||++|++++. ++ |.|||..++ ++++++
T Consensus 287 ~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~-v~v~D~~t~~l~~~~~i 343 (361)
T 2oiz_A 287 EIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GN-VNVYDISQPEPKLLRTI 343 (361)
T ss_dssp EEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SC-EEEEECSSSSCEEEEEE
T ss_pred eEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-Ce-EEEEECCCCcceeeEEe
Confidence 899999887664 4677776 999999999999999986 88 999999999 888763
No 165
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.44 E-value=2.7e-10 Score=98.55 Aligned_cols=201 Identities=15% Similarity=0.219 Sum_probs=132.7
Q ss_pred CCeEEEEEcCCCCEEEEEcC-CeEEEEEcCCCceEEEEeee-----cCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEE
Q 022387 86 PTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFE-----RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (298)
Q Consensus 86 ~~V~~v~fs~dg~~lasgs~-~gi~vw~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~ 159 (298)
..+.+++++++|+++++... +.|++|+.+ .+........ +......+.+......+.++..+ .++.|+
T Consensus 30 ~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~-----~~~~i~ 103 (286)
T 1q7f_A 30 TEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS-----PTHQIQ 103 (286)
T ss_dssp SCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG-----GGCEEE
T ss_pred CCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC-----CCCEEE
Confidence 47889999999998888765 668899876 3333222210 11244555553233344444421 157899
Q ss_pred EEeCCCCcEEEEeecC--CceEEEEEeCC-eEEEEE--CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEe
Q 022387 160 IWDDHQSRCIGELSFR--SEVRSVKLRRD-RIIVVL--EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCP 234 (298)
Q Consensus 160 iWD~~~~~~~~~~~~~--~~v~~v~~~~~-~l~v~~--~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~s 234 (298)
+|| .+++.+..+... ..+..+.++++ .+.++. ++.|.+||. +++.+..+...........+..++++.+++ +
T Consensus 104 ~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v-~ 180 (286)
T 1q7f_A 104 IYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIFI-S 180 (286)
T ss_dssp EEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEEE-E
T ss_pred EEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEEECCCCCEEE-E
Confidence 999 566666666432 36788888865 355554 378999996 456666665322222344555566667766 4
Q ss_pred cCCCceEEEEEcCCcceEeeccc--ccceeEEEECCCCCEEEEEeCCC-CEEEEEECCCCcEEEec
Q 022387 235 GLQKGQVRVEHYASKRTKFIMAH--DSRIACFALTQDGQLLATSSTKG-TLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 235 Gs~dg~v~i~~~~~~~~~~~~~H--~~~V~~l~fspdg~~lAt~S~Dg-t~IrIWd~~tg~~l~~~ 297 (298)
...++.|.+|+.+.+.+..+..+ ...+..|+++++|+++++...++ . |++||. +|+.++++
T Consensus 181 ~~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~-i~~~~~-~g~~~~~~ 244 (286)
T 1q7f_A 181 DNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFN-LTIFTQ-DGQLISAL 244 (286)
T ss_dssp EGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCE-EEEECT-TSCEEEEE
T ss_pred ECCCCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEE-EEEECC-CCCEEEEE
Confidence 67788999999877665555433 46799999999999999998886 8 999994 57666554
No 166
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.41 E-value=4.1e-11 Score=106.41 Aligned_cols=193 Identities=16% Similarity=0.114 Sum_probs=121.6
Q ss_pred CCeEEEEEcCCCCEEEEEcC-C---e--EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCC--C-------
Q 022387 86 PTLLHISFNQDHGCFAAGTD-H---G--FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGP--D------- 150 (298)
Q Consensus 86 ~~V~~v~fs~dg~~lasgs~-~---g--i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------- 150 (298)
..+..++|||||++||..+. . . +.+|++++.+....... .. +..+.|++++..+++++... +
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~--~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~ 135 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEA--KN-IRSLEWNEDSRKLLIVGFKRREDEDFIFED 135 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE--SE-EEEEEECTTSSEEEEEEECCCC--------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcC--CC-ccceeECCCCCEEEEEEccCCCcCCcEEEc
Confidence 36788999999999997764 2 2 55667776654333332 33 77778888998888876210 0
Q ss_pred --C------C---CCCCeEEEEeCCCCcEEEEeecCCceEEEEEeCCeEEEEEC--------C-eEEEEEcCCCeEEEEE
Q 022387 151 --P------Q---YPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVVLE--------Q-KIFVYNFADLKLLHQI 210 (298)
Q Consensus 151 --~------~---~~d~~v~iWD~~~~~~~~~~~~~~~v~~v~~~~~~l~v~~~--------~-~I~iwd~~~~~~i~~~ 210 (298)
. . -....|.+||+.+++.+..+... .+..+.|+++.+++... . ...||.+.+++ +..+
T Consensus 136 ~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~l 213 (347)
T 2gop_A 136 DVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWEDGK-EEKM 213 (347)
T ss_dssp -CCCC---------CEEEEEEEETTTTEEEEEEEEE-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEETTE-EEEE
T ss_pred ccceeecCcccccCccceEEEEECCCCeEEeeecCC-CcccccCCCCeEEEEEecccccccccccccEEEeCCCc-eEEe
Confidence 0 0 01357999999988764444443 78888999987444331 1 33444443444 3444
Q ss_pred eccCCCcceEEEEeCCCCeEEEEecCC-------CceEEEEEcCCcceEeecccccceeE-EEECCCCCEEEEEeCCCCE
Q 022387 211 ETIANPKGLCAVSQGVGSLVLVCPGLQ-------KGQVRVEHYASKRTKFIMAHDSRIAC-FALTQDGQLLATSSTKGTL 282 (298)
Q Consensus 211 ~~~~~~~~~~~~s~~~d~~~la~sGs~-------dg~v~i~~~~~~~~~~~~~H~~~V~~-l~fspdg~~lAt~S~Dgt~ 282 (298)
..+ .....++++ +..|++.+.. ...|.+|+ ..+.......|...|.. ++|+ || ++++++.|+.
T Consensus 214 ~~~---~~~~~~spd--g~~l~~~~~~~~~~~~~~~~l~~~d-~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~- 284 (347)
T 2gop_A 214 FEK---VSFYAVDSD--GERILLYGKPEKKYMSEHNKLYIYD-GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGS- 284 (347)
T ss_dssp EEE---ESEEEEEEC--SSCEEEEECCSSSCCCSSCEEEEEC-SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTE-
T ss_pred ccC---cceeeECCC--CCEEEEEEccccCCccccceEEEEC-CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCc-
Confidence 433 223334554 4555543332 24677777 33333344567788886 9999 99 9999999998
Q ss_pred EEEEECCCCcE
Q 022387 283 VRIFNTLDGTL 293 (298)
Q Consensus 283 IrIWd~~tg~~ 293 (298)
++|| +.+|+.
T Consensus 285 ~~l~-~~~g~~ 294 (347)
T 2gop_A 285 VNLY-IWDGEI 294 (347)
T ss_dssp EEEE-EESSSE
T ss_pred EEEE-EcCCce
Confidence 9999 886654
No 167
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.39 E-value=1e-10 Score=105.48 Aligned_cols=197 Identities=10% Similarity=0.005 Sum_probs=126.4
Q ss_pred eEEEEEcCCCCE--EEEEc-------------C-CeEEEEEcCC-CceEEEEee---ecCCceEEEEEecCCCEEEEEeC
Q 022387 88 LLHISFNQDHGC--FAAGT-------------D-HGFRIYNCDP-FREIFRRDF---ERGGGIGVVEMLFRCNILALVGG 147 (298)
Q Consensus 88 V~~v~fs~dg~~--lasgs-------------~-~gi~vw~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 147 (298)
+.+++|+|||++ ++++. . +.+.+|+++. ++....... .+...+..+.+++++..++++..
T Consensus 85 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~ 164 (365)
T 1jof_A 85 PRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADL 164 (365)
T ss_dssp GGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEET
T ss_pred CccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcC
Confidence 445889999994 55553 3 4588999975 333222211 12346777888888887776653
Q ss_pred CCCCCCCCCeEEEEeCC-CCcEE--EEeec---CCceEEEEEeCC--eEEEEE--CCeEEEEEcC--CCeEE---EEEec
Q 022387 148 GPDPQYPLNKVMIWDDH-QSRCI--GELSF---RSEVRSVKLRRD--RIIVVL--EQKIFVYNFA--DLKLL---HQIET 212 (298)
Q Consensus 148 ~~~~~~~d~~v~iWD~~-~~~~~--~~~~~---~~~v~~v~~~~~--~l~v~~--~~~I~iwd~~--~~~~i---~~~~~ 212 (298)
+ ++.|++||+. +++.. ..+.. ...+..+.|+++ .++++. ++.|.+|++. +++.. ..+..
T Consensus 165 ~------~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~ 238 (365)
T 1jof_A 165 T------ANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPL 238 (365)
T ss_dssp T------TTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEES
T ss_pred C------CCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEc
Confidence 2 4789999998 67643 33432 345788999986 455555 3799999874 45542 23332
Q ss_pred cCCC----c-------ceEEEE-eCCCCeEEEEecCCCc-----eEEEEEcC-CcceEe----ecccccceeEEEECC--
Q 022387 213 IANP----K-------GLCAVS-QGVGSLVLVCPGLQKG-----QVRVEHYA-SKRTKF----IMAHDSRIACFALTQ-- 268 (298)
Q Consensus 213 ~~~~----~-------~~~~~s-~~~d~~~la~sGs~dg-----~v~i~~~~-~~~~~~----~~~H~~~V~~l~fsp-- 268 (298)
.... . ....+. .++|+.+|+++...+. .|.+|++. .+.+.. +..+...+..++|+|
T Consensus 239 ~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~ 318 (365)
T 1jof_A 239 IPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCP 318 (365)
T ss_dssp SCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECT
T ss_pred CCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCC
Confidence 1110 1 234455 5566676665443333 89999985 444432 333566788999999
Q ss_pred -CCCEEEEEeCC-CCEEEEEECCCC
Q 022387 269 -DGQLLATSSTK-GTLVRIFNTLDG 291 (298)
Q Consensus 269 -dg~~lAt~S~D-gt~IrIWd~~tg 291 (298)
||++|++++.+ ++ |+||++...
T Consensus 319 ~dg~~l~v~~~~~~~-v~v~~~~~~ 342 (365)
T 1jof_A 319 WSDEWMAITDDQEGW-LEIYRWKDE 342 (365)
T ss_dssp TCTTEEEEECSSSCE-EEEEEEETT
T ss_pred cCCCEEEEEEcCCCe-EEEEEEchh
Confidence 89999999875 67 999998766
No 168
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.38 E-value=1.9e-10 Score=102.31 Aligned_cols=202 Identities=8% Similarity=0.009 Sum_probs=133.7
Q ss_pred CCeEEEEEcCCCCEEEEEcCC-------------------------eEEEEEcCCCceEEEEeeecCCceEEEEEecCCC
Q 022387 86 PTLLHISFNQDHGCFAAGTDH-------------------------GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCN 140 (298)
Q Consensus 86 ~~V~~v~fs~dg~~lasgs~~-------------------------gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (298)
..|.+|+|+++|++++++..+ .+.+||.++++........+......+.+..+++
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~ 103 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN 103 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCC
Confidence 479999999999999888766 4789998877654332210122456677777777
Q ss_pred EEEEEeCCCCCCCCCCeEEEEeCCCCc-EEEEeec----------CCceEEEEEeC--CeEEEEE---CCeEEEEEcCCC
Q 022387 141 ILALVGGGPDPQYPLNKVMIWDDHQSR-CIGELSF----------RSEVRSVKLRR--DRIIVVL---EQKIFVYNFADL 204 (298)
Q Consensus 141 ~~~~~~~~~~~~~~d~~v~iWD~~~~~-~~~~~~~----------~~~v~~v~~~~--~~l~v~~---~~~I~iwd~~~~ 204 (298)
++++.. .++.|++||..... .+..+.. ......+++++ ..++++. ++.|++|| .++
T Consensus 104 l~v~d~-------~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g 175 (329)
T 3fvz_A 104 YWVTDV-------ALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSG 175 (329)
T ss_dssp EEEEET-------TTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTS
T ss_pred EEEEEC-------CCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCC
Confidence 444433 45889999986542 4444421 12577899986 4555554 36999999 567
Q ss_pred eEEEEEeccCCC--------cceEEEEeCCC-CeEEEEecCCCceEEEEEcCC-cceEee--cccccceeEEEECC----
Q 022387 205 KLLHQIETIANP--------KGLCAVSQGVG-SLVLVCPGLQKGQVRVEHYAS-KRTKFI--MAHDSRIACFALTQ---- 268 (298)
Q Consensus 205 ~~i~~~~~~~~~--------~~~~~~s~~~d-~~~la~sGs~dg~v~i~~~~~-~~~~~~--~~H~~~V~~l~fsp---- 268 (298)
+.+..+...... .....+..+++ +.+++ +...++.|++|+..+ +.+..+ ..+...+..++|+|
T Consensus 176 ~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v-~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~ 254 (329)
T 3fvz_A 176 KFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCV-ADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLF 254 (329)
T ss_dssp CEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEE-EETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEE
T ss_pred CEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEE-EECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEE
Confidence 777776432211 11233444444 46665 478899999999984 444444 45667899999999
Q ss_pred --CCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 269 --DGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 269 --dg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
+|+.+++.+.+.+ |++||+.+|+++..+
T Consensus 255 ~~~g~~~v~~~~~~~-v~~~~~~~g~~~~~~ 284 (329)
T 3fvz_A 255 AVNGKPYFGDQEPVQ-GFVMNFSSGEIIDVF 284 (329)
T ss_dssp EEECCCCTTCSCCCC-EEEEETTTCCEEEEE
T ss_pred EeCCCEEeccCCCcE-EEEEEcCCCeEEEEE
Confidence 4444444445558 999999999988764
No 169
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.36 E-value=1.3e-12 Score=127.95 Aligned_cols=194 Identities=8% Similarity=-0.018 Sum_probs=123.3
Q ss_pred CeEEEEEcCCCCEEEEEcC----------CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCC
Q 022387 87 TLLHISFNQDHGCFAAGTD----------HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLN 156 (298)
Q Consensus 87 ~V~~v~fs~dg~~lasgs~----------~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 156 (298)
.|.+++|||||++||++++ ..+++|++++++.+....+ ...+..+.+++++..++++. ++
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l--~~~~~~~~~SPDG~~la~~~--------~~ 130 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL--PRPIQYLCWSPVGSKLAYVY--------QN 130 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC--CSSBCCEEECSSTTCEEEEE--------TT
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec--CcccccceECCCCCEEEEEE--------CC
Confidence 4789999999999998875 4488999988764211222 34567788999999998876 47
Q ss_pred eEEEEeCCCCcEEEEeecC-C-ce-----------------EEEEEeCC--eEEEEE-CC--------------------
Q 022387 157 KVMIWDDHQSRCIGELSFR-S-EV-----------------RSVKLRRD--RIIVVL-EQ-------------------- 194 (298)
Q Consensus 157 ~v~iWD~~~~~~~~~~~~~-~-~v-----------------~~v~~~~~--~l~v~~-~~-------------------- 194 (298)
+|++||+.+++..+..... . .+ .++.|+++ .++.+. ++
T Consensus 131 ~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~ 210 (719)
T 1z68_A 131 NIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTI 210 (719)
T ss_dssp EEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEE
T ss_pred eEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccce
Confidence 8999999888765432111 1 12 47889886 454443 21
Q ss_pred --------------eEEEEEcCCCeEE--EEE------eccCCCcceEEEEeCCCCeEEEEe-cCCC--ceEEEEE----
Q 022387 195 --------------KIFVYNFADLKLL--HQI------ETIANPKGLCAVSQGVGSLVLVCP-GLQK--GQVRVEH---- 245 (298)
Q Consensus 195 --------------~I~iwd~~~~~~i--~~~------~~~~~~~~~~~~s~~~d~~~la~s-Gs~d--g~v~i~~---- 245 (298)
.|++||+.+++.+ ..+ ..+...+ ..+.+.+|+.+++.. ...+ ..|.+|+
T Consensus 211 ~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~ 288 (719)
T 1z68_A 211 NIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYF--SWLTWVTDERVCLQWLKRVQNVSVLSICDFRED 288 (719)
T ss_dssp EEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEE--EEEEESSSSEEEEEEEESSTTEEEEEEEEECSS
T ss_pred eecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceE--EEeEEeCCCeEEEEEeccccCeEEEEEEcccCC
Confidence 7889999877642 111 1222223 344455556666531 1122 3477788
Q ss_pred cCCcceE-ee----ccccccee-----EEEECCCCCEEEE--EeCCCC-EEEEEECCCCc
Q 022387 246 YASKRTK-FI----MAHDSRIA-----CFALTQDGQLLAT--SSTKGT-LVRIFNTLDGT 292 (298)
Q Consensus 246 ~~~~~~~-~~----~~H~~~V~-----~l~fspdg~~lAt--~S~Dgt-~IrIWd~~tg~ 292 (298)
..+.... .+ ..|...|. .++|+|||+.|+. +..+|. .|.+||+.+++
T Consensus 289 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~ 348 (719)
T 1z68_A 289 WQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN 348 (719)
T ss_dssp SSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT
T ss_pred CCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc
Confidence 6555443 33 36777777 8999999996554 445553 16666776665
No 170
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.32 E-value=1.1e-09 Score=97.50 Aligned_cols=196 Identities=11% Similarity=0.129 Sum_probs=132.9
Q ss_pred CCeEEEEEcCCCCEEEEE-cCCeEEEEEcCCCceEEEEeeecCC------ceEEEEEecCCCEEEEEeCCCCCCCCCCeE
Q 022387 86 PTLLHISFNQDHGCFAAG-TDHGFRIYNCDPFREIFRRDFERGG------GIGVVEMLFRCNILALVGGGPDPQYPLNKV 158 (298)
Q Consensus 86 ~~V~~v~fs~dg~~lasg-s~~gi~vw~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v 158 (298)
.....++|+++|+++++. .++.+.+||..+.+....... .. ....+.+ ....+.++..+ .+++|
T Consensus 84 ~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~--g~~~~~~~~p~~i~~--~~~~lyv~~~~-----~~~~v 154 (328)
T 3dsm_A 84 TSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIEC--PDMDMESGSTEQMVQ--YGKYVYVNCWS-----YQNRI 154 (328)
T ss_dssp SSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEEC--TTCCTTTCBCCCEEE--ETTEEEEEECT-----TCCEE
T ss_pred CCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEc--CCccccCCCcceEEE--ECCEEEEEcCC-----CCCEE
Confidence 468899999999655555 246688999998876555543 22 2333333 45555555422 25889
Q ss_pred EEEeCCCCcEEEEeecCCceEEEEEeCC-eEEEEEC------------CeEEEEEcCCCeEEEEEeccC-CCcceEEEEe
Q 022387 159 MIWDDHQSRCIGELSFRSEVRSVKLRRD-RIIVVLE------------QKIFVYNFADLKLLHQIETIA-NPKGLCAVSQ 224 (298)
Q Consensus 159 ~iWD~~~~~~~~~~~~~~~v~~v~~~~~-~l~v~~~------------~~I~iwd~~~~~~i~~~~~~~-~~~~~~~~s~ 224 (298)
.++|..+++.+.++........+.++++ .++++.. +.|.++|..+++...++.... .....+++++
T Consensus 155 ~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~ 234 (328)
T 3dsm_A 155 LKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNG 234 (328)
T ss_dssp EEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECT
T ss_pred EEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEec
Confidence 9999999998888877666667788774 4444432 479999999998887776432 2233445544
Q ss_pred CCCCeEEEEecCCCceEEEEEcCCcceE---eecccccceeEEEECC-CCCEEEEE----eCCCCEEEEEECCCCcEEEe
Q 022387 225 GVGSLVLVCPGLQKGQVRVEHYASKRTK---FIMAHDSRIACFALTQ-DGQLLATS----STKGTLVRIFNTLDGTLLQE 296 (298)
Q Consensus 225 ~~d~~~la~sGs~dg~v~i~~~~~~~~~---~~~~H~~~V~~l~fsp-dg~~lAt~----S~Dgt~IrIWd~~tg~~l~~ 296 (298)
++..+.++.. .|.++|..+..+. .+..+......|+++| +++++++. ..+++ |.+||.. |+++++
T Consensus 235 --d~~~lyv~~~---~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~-V~v~d~~-g~~~~~ 307 (328)
T 3dsm_A 235 --TRDTLYWINN---DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGI-VYRYSPQ-GKLIDE 307 (328)
T ss_dssp --TSCEEEEESS---SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEE-EEEECTT-CCEEEE
T ss_pred --CCCEEEEEcc---EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCE-EEEECCC-CCEEEE
Confidence 4455543222 7888888765542 1222246799999999 67888887 67888 9999998 998877
Q ss_pred c
Q 022387 297 G 297 (298)
Q Consensus 297 ~ 297 (298)
+
T Consensus 308 i 308 (328)
T 3dsm_A 308 F 308 (328)
T ss_dssp E
T ss_pred E
Confidence 5
No 171
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.31 E-value=7.9e-10 Score=98.25 Aligned_cols=196 Identities=11% Similarity=0.077 Sum_probs=129.7
Q ss_pred CCeEEEEEcCCCCEEEEEcC-CeEEEEEcCCCc-eEEEEee--------ecCCceEEEEEec-CCCEEEEEeCCCCCCCC
Q 022387 86 PTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFR-EIFRRDF--------ERGGGIGVVEMLF-RCNILALVGGGPDPQYP 154 (298)
Q Consensus 86 ~~V~~v~fs~dg~~lasgs~-~gi~vw~~~~~~-~~~~~~~--------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 154 (298)
.....++|+++|+++++... +.|++|+.+... .+..... .+......+.+.+ ++..+ ++.+. .
T Consensus 91 ~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~ly-v~d~~-----~ 164 (329)
T 3fvz_A 91 YLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVF-VSDGY-----C 164 (329)
T ss_dssp SSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEE-EEECS-----S
T ss_pred CCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEE-EEeCC-----C
Confidence 47889999999998888876 568899876542 2222210 0112455677776 44444 43321 2
Q ss_pred CCeEEEEeCCCCcEEEEeecC-----------CceEEEEEeCC--eEEEEE--CCeEEEEEcCCCeEEEEEeccCCCcce
Q 022387 155 LNKVMIWDDHQSRCIGELSFR-----------SEVRSVKLRRD--RIIVVL--EQKIFVYNFADLKLLHQIETIANPKGL 219 (298)
Q Consensus 155 d~~v~iWD~~~~~~~~~~~~~-----------~~v~~v~~~~~--~l~v~~--~~~I~iwd~~~~~~i~~~~~~~~~~~~ 219 (298)
++.|++|| .+++.+..+... .....++++++ .++++. ++.|++||..+++.+.++.........
T Consensus 165 ~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~ 243 (329)
T 3fvz_A 165 NSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNV 243 (329)
T ss_dssp CCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCE
T ss_pred CCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCc
Confidence 58899999 566666665421 13678899875 555654 379999999888888888543222222
Q ss_pred EEEEeCCCCeEEEEe------cCCCceEEEEEcCCcceE-ee---cccccceeEEEECCCCCEEEEEeCCCCEEEEEECC
Q 022387 220 CAVSQGVGSLVLVCP------GLQKGQVRVEHYASKRTK-FI---MAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTL 289 (298)
Q Consensus 220 ~~~s~~~d~~~la~s------Gs~dg~v~i~~~~~~~~~-~~---~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~ 289 (298)
..+...+ +.+++.. ...+..|.+|+.....+. .+ .+|...+..|+|+|+|.++++.+.+++ |++|++.
T Consensus 244 ~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~-I~~~~~~ 321 (329)
T 3fvz_A 244 FAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNT-VWKFTLT 321 (329)
T ss_dssp EEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCC-EEEEEEE
T ss_pred ceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCE-EEEEeCC
Confidence 3333333 3333322 344568999998766554 44 467788999999999999999999999 9999976
Q ss_pred C
Q 022387 290 D 290 (298)
Q Consensus 290 t 290 (298)
.
T Consensus 322 ~ 322 (329)
T 3fvz_A 322 E 322 (329)
T ss_dssp E
T ss_pred c
Confidence 4
No 172
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.29 E-value=2.2e-10 Score=103.16 Aligned_cols=207 Identities=13% Similarity=0.052 Sum_probs=121.3
Q ss_pred CCCCeEEEEEcCCCCEEEEEcC-CeEEEEEcCCCceEEEEeeecCCceEEEEE--ecCCCEEEEEeCCC-C---------
Q 022387 84 PPPTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEM--LFRCNILALVGGGP-D--------- 150 (298)
Q Consensus 84 ~~~~V~~v~fs~dg~~lasgs~-~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~--------- 150 (298)
+...+..++|+|||++|+.++. ..+.+|++++.+....... +.+......+ ..++..++...... +
T Consensus 79 ~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~-~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~ 157 (388)
T 3pe7_A 79 RGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQV-PAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKK 157 (388)
T ss_dssp SCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC-CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHH
T ss_pred CCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeec-hhhcccccceeECCCCCeeccccccCcccccccccch
Confidence 3334446789999999998886 4688999998876544443 2332322332 45565554321000 0
Q ss_pred -----CCCCCCeEEEEeCCCCcEEEEeecCCceEEEEEeC-Ce--EEEEEC-------CeEEEEEcCCCeEEEEEeccCC
Q 022387 151 -----PQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRR-DR--IIVVLE-------QKIFVYNFADLKLLHQIETIAN 215 (298)
Q Consensus 151 -----~~~~d~~v~iWD~~~~~~~~~~~~~~~v~~v~~~~-~~--l~v~~~-------~~I~iwd~~~~~~i~~~~~~~~ 215 (298)
....+..|.+||+.+++..........+..+.|++ +. ++.+.. ..|.++|+...+. +.+..+..
T Consensus 158 ~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~ 236 (388)
T 3pe7_A 158 FHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAE 236 (388)
T ss_dssp HHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCT
T ss_pred hhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCC
Confidence 00034779999999987765556666788899998 64 333432 2677788765443 33333322
Q ss_pred CcceEEEEeCCCCeEEEEecCCC----ceEEEEEcCCcceEee---ccccc---ceeEEEECCCCCEEEEE---------
Q 022387 216 PKGLCAVSQGVGSLVLVCPGLQK----GQVRVEHYASKRTKFI---MAHDS---RIACFALTQDGQLLATS--------- 276 (298)
Q Consensus 216 ~~~~~~~s~~~d~~~la~sGs~d----g~v~i~~~~~~~~~~~---~~H~~---~V~~l~fspdg~~lAt~--------- 276 (298)
........+++|+..|++.+..+ +.|.+|+..++....+ .++.. ....++|+|||++||..
T Consensus 237 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 316 (388)
T 3pe7_A 237 GESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKI 316 (388)
T ss_dssp TEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------
T ss_pred CcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeecccccc
Confidence 12233444555666565433332 2488899987764433 32111 12334799999988864
Q ss_pred eCCCCEEEEEECCCCcE
Q 022387 277 STKGTLVRIFNTLDGTL 293 (298)
Q Consensus 277 S~Dgt~IrIWd~~tg~~ 293 (298)
..+.. |.+||+.+++.
T Consensus 317 ~~~~~-i~~~d~~~~~~ 332 (388)
T 3pe7_A 317 ENDPF-LYVFNMKNGTQ 332 (388)
T ss_dssp CCCCE-EEEEETTTTEE
T ss_pred CCCCE-EEEEeccCCce
Confidence 34556 99999998865
No 173
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.28 E-value=6.4e-11 Score=106.60 Aligned_cols=194 Identities=10% Similarity=-0.092 Sum_probs=119.3
Q ss_pred eEEEEEcCCCCEEEEEcCC----eEEEEEcCCCceEEEEeeecCCce-EEEEEecCCCEEEEEeCCCCCCCCCCeEEEEe
Q 022387 88 LLHISFNQDHGCFAAGTDH----GFRIYNCDPFREIFRRDFERGGGI-GVVEMLFRCNILALVGGGPDPQYPLNKVMIWD 162 (298)
Q Consensus 88 V~~v~fs~dg~~lasgs~~----gi~vw~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD 162 (298)
+..++|+|||++||..... .+.+|+.++.+...... +.... ....|++++..+++++ .++.|.+||
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~--~~~~~~~~~~~spdg~~l~~~~-------~~~~l~~~d 108 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTE--GKGDNTFGGFISTDERAFFYVK-------NELNLMKVD 108 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCC--SSCBCTTTCEECTTSSEEEEEE-------TTTEEEEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeec--CCCCccccceECCCCCEEEEEE-------cCCcEEEEE
Confidence 5567899999998877542 36677877765422111 12221 2256788999998888 456899999
Q ss_pred CCCCcEEEEeecCCce----EEEE----------------EeCC--eEEE------EECCeEEEEEcCCCeEEEEEeccC
Q 022387 163 DHQSRCIGELSFRSEV----RSVK----------------LRRD--RIIV------VLEQKIFVYNFADLKLLHQIETIA 214 (298)
Q Consensus 163 ~~~~~~~~~~~~~~~v----~~v~----------------~~~~--~l~v------~~~~~I~iwd~~~~~~i~~~~~~~ 214 (298)
+.+++........... ..+. ++++ .+++ .....|.+||+.+++..... .+.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~ 187 (396)
T 3c5m_A 109 LETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDT 187 (396)
T ss_dssp TTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EES
T ss_pred CCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCC
Confidence 9988765544433221 1121 1221 1111 12348999999887754433 333
Q ss_pred CCcceEEEEeCCCCeEEEEecCC-C----ceEEEEEcCCcceEeecccc--cceeEEEECCCCCEEEEEeCC-----CCE
Q 022387 215 NPKGLCAVSQGVGSLVLVCPGLQ-K----GQVRVEHYASKRTKFIMAHD--SRIACFALTQDGQLLATSSTK-----GTL 282 (298)
Q Consensus 215 ~~~~~~~~s~~~d~~~la~sGs~-d----g~v~i~~~~~~~~~~~~~H~--~~V~~l~fspdg~~lAt~S~D-----gt~ 282 (298)
..+..+.++++ ++..|++.... . ..|.+++........+..+. ..+..++|+|||++||.++.+ +.
T Consensus 188 ~~~~~~~~sp~-dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~- 265 (396)
T 3c5m_A 188 AWLGHPIYRPF-DDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRV- 265 (396)
T ss_dssp SCEEEEEEETT-EEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEE-
T ss_pred cccccceECCC-CCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccce-
Confidence 44445566551 34555543222 1 46777888766555554442 368899999999988887654 45
Q ss_pred EEEEECCCCcE
Q 022387 283 VRIFNTLDGTL 293 (298)
Q Consensus 283 IrIWd~~tg~~ 293 (298)
|++||+.+|+.
T Consensus 266 l~~~d~~~g~~ 276 (396)
T 3c5m_A 266 IYKANPETLEN 276 (396)
T ss_dssp EEEECTTTCCE
T ss_pred EEEEECCCCCe
Confidence 99999998865
No 174
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.28 E-value=9e-10 Score=107.99 Aligned_cols=209 Identities=10% Similarity=0.047 Sum_probs=133.6
Q ss_pred CCCCeEEEEEcCCCCEEEEEcC-C-----eEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCC------
Q 022387 84 PPPTLLHISFNQDHGCFAAGTD-H-----GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDP------ 151 (298)
Q Consensus 84 ~~~~V~~v~fs~dg~~lasgs~-~-----gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 151 (298)
+...+..++|||||++||.+.+ + .|++||+++++..... . ....+..+.|++++..++++......
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~-~-~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~ 200 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDV-L-ERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGT 200 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEE-E-EEECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccc-c-cCcccceEEEEeCCCEEEEEEECCcccccccc
Confidence 3336889999999999997654 3 5789999988754322 1 12234567889999988887732210
Q ss_pred ---CCCCCeEEEEeCCCCcE--EEEeec---CCceEEEEEeCC--eEEEEE------CCeEEEEEcCC------Ce-EEE
Q 022387 152 ---QYPLNKVMIWDDHQSRC--IGELSF---RSEVRSVKLRRD--RIIVVL------EQKIFVYNFAD------LK-LLH 208 (298)
Q Consensus 152 ---~~~d~~v~iWD~~~~~~--~~~~~~---~~~v~~v~~~~~--~l~v~~------~~~I~iwd~~~------~~-~i~ 208 (298)
......|++|++.+++. ...+.. ...+..+.++++ .+++.. ...|++||+.+ ++ .+.
T Consensus 201 ~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 280 (710)
T 2xdw_A 201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWV 280 (710)
T ss_dssp CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCE
T ss_pred ccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceE
Confidence 01134599999988762 122222 224677888875 344443 35899999975 32 355
Q ss_pred EEeccCCCcceEEEEeCCCCeEEEEecCC---CceEEEEEcCCcc---eEeeccccc--ceeEEEECCCCCEEEEEeCCC
Q 022387 209 QIETIANPKGLCAVSQGVGSLVLVCPGLQ---KGQVRVEHYASKR---TKFIMAHDS--RIACFALTQDGQLLATSSTKG 280 (298)
Q Consensus 209 ~~~~~~~~~~~~~~s~~~d~~~la~sGs~---dg~v~i~~~~~~~---~~~~~~H~~--~V~~l~fspdg~~lAt~S~Dg 280 (298)
.+..+..... ..++++++ .|++.+.. ++.|.+|+..... ...+..|.. .|..++|++++.++++...|+
T Consensus 281 ~l~~~~~~~~-~~~s~dg~--~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g 357 (710)
T 2xdw_A 281 KLIDNFEGEY-DYVTNEGT--VFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDV 357 (710)
T ss_dssp EEECSSSSCE-EEEEEETT--EEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETT
T ss_pred EeeCCCCcEE-EEEeccCC--EEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECC
Confidence 6665544332 34666553 33333333 3478889887643 345555644 688999998889999999998
Q ss_pred C-EEEEEECCCCcEEEec
Q 022387 281 T-LVRIFNTLDGTLLQEG 297 (298)
Q Consensus 281 t-~IrIWd~~tg~~l~~~ 297 (298)
. .|++||+.+|+.++++
T Consensus 358 ~~~l~~~~~~~g~~~~~l 375 (710)
T 2xdw_A 358 KNTLQLHDLATGALLKIF 375 (710)
T ss_dssp EEEEEEEETTTCCEEEEE
T ss_pred EEEEEEEECCCCCEEEec
Confidence 5 1566777788766553
No 175
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.28 E-value=1e-09 Score=95.53 Aligned_cols=187 Identities=13% Similarity=0.101 Sum_probs=133.1
Q ss_pred CCCEEEEEcCCe-EEEEEcCCCceEEEEeeecC-CceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCCcEEEEee
Q 022387 96 DHGCFAAGTDHG-FRIYNCDPFREIFRRDFERG-GGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELS 173 (298)
Q Consensus 96 dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~~~~~~~ 173 (298)
.+++|++++.++ +.+||.++++.++.... +. .....+.+.++++.++ + .++.|..||. +++.+.++.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~-~~~~~~~~~~~~pdG~ilv--s-------~~~~V~~~d~-~G~~~W~~~ 72 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPL-EKGWECNSVAATKAGEILF--S-------YSKGAKMITR-DGRELWNIA 72 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEEC-CTTCCCCEEEECTTSCEEE--E-------CBSEEEEECT-TSCEEEEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCC-CccCCCcCeEECCCCCEEE--e-------CCCCEEEECC-CCCEEEEEc
Confidence 467888888754 78999999998877764 22 2466777888888766 3 2477999999 888888887
Q ss_pred cC--CceEEEEEeCCe-EEEE-EC--CeEEEEEcCCCeEEEEEeccCC---C-cceEEEEeCCCCeEEEEecCCCceEEE
Q 022387 174 FR--SEVRSVKLRRDR-IIVV-LE--QKIFVYNFADLKLLHQIETIAN---P-KGLCAVSQGVGSLVLVCPGLQKGQVRV 243 (298)
Q Consensus 174 ~~--~~v~~v~~~~~~-l~v~-~~--~~I~iwd~~~~~~i~~~~~~~~---~-~~~~~~s~~~d~~~la~sGs~dg~v~i 243 (298)
.. ..+.++.+.++. ++++ .. +.|..+|. +++.+.++..... + .....++..+++.++++ ...++.|..
T Consensus 73 ~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~-~~~~~~v~~ 150 (276)
T 3no2_A 73 APAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVP-LFATSEVRE 150 (276)
T ss_dssp CCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEE-ETTTTEEEE
T ss_pred CCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEE-ecCCCEEEE
Confidence 64 366777776643 3333 32 35655664 7888887763211 0 01112234556678774 788999999
Q ss_pred EEcCCcceEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 244 EHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 244 ~~~~~~~~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
+|.+.+.+.++..+ ..+.++.+.++|.++++++.+++ |..||..+|+.+.+|
T Consensus 151 ~d~~G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~-v~~~d~~tG~~~w~~ 202 (276)
T 3no2_A 151 IAPNGQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHC-FVQLNLESNRIVRRV 202 (276)
T ss_dssp ECTTSCEEEEEECS-SCCCEEEECTTSCEEEECBTTSE-EEEECTTTCCEEEEE
T ss_pred ECCCCCEEEEEECC-CCccceeEcCCCCEEEEeCCCCe-EEEEeCcCCcEEEEe
Confidence 99986656666654 45677889999999999998888 999999999998876
No 176
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.28 E-value=6.3e-09 Score=92.48 Aligned_cols=191 Identities=7% Similarity=-0.050 Sum_probs=133.0
Q ss_pred CeEEEEEcCCCCEEEEEcC-CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCC
Q 022387 87 TLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ 165 (298)
Q Consensus 87 ~V~~v~fs~dg~~lasgs~-~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~ 165 (298)
....+.+.. ++++++... +.+.+||..+.+.+.+... ......+.+..++ .+.++.. .++.|.+||..+
T Consensus 45 ~~~~i~~~~-~~lyv~~~~~~~v~viD~~t~~~~~~i~~--~~~p~~i~~~~~g-~lyv~~~------~~~~v~~iD~~t 114 (328)
T 3dsm_A 45 VAQSMVIRD-GIGWIVVNNSHVIFAIDINTFKEVGRITG--FTSPRYIHFLSDE-KAYVTQI------WDYRIFIINPKT 114 (328)
T ss_dssp CEEEEEEET-TEEEEEEGGGTEEEEEETTTCCEEEEEEC--CSSEEEEEEEETT-EEEEEEB------SCSEEEEEETTT
T ss_pred cceEEEEEC-CEEEEEEcCCCEEEEEECcccEEEEEcCC--CCCCcEEEEeCCC-eEEEEEC------CCCeEEEEECCC
Confidence 467787753 344444443 6688999999887665542 4556666666665 4433331 258899999999
Q ss_pred CcEEEEeecCC------ceEEEEEeCCeEEEEE---CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEecC
Q 022387 166 SRCIGELSFRS------EVRSVKLRRDRIIVVL---EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGL 236 (298)
Q Consensus 166 ~~~~~~~~~~~------~v~~v~~~~~~l~v~~---~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs 236 (298)
++....+.... ....+.+..+.+.++. ++.|.++|+.+++.+.++.....+. .+++ ++++.++++ +.
T Consensus 115 ~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~-~i~~--~~dG~l~v~-~~ 190 (328)
T 3dsm_A 115 YEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPT-SLVM--DKYNKMWTI-TD 190 (328)
T ss_dssp TEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBC-CCEE--CTTSEEEEE-BC
T ss_pred CeEEEEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCcc-ceEE--cCCCCEEEE-EC
Confidence 98887777554 5556667777888775 5799999999999988887655443 3344 455676664 44
Q ss_pred CC----------ceEEEEEcCCcceE-eeccc-ccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEE
Q 022387 237 QK----------GQVRVEHYASKRTK-FIMAH-DSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLL 294 (298)
Q Consensus 237 ~d----------g~v~i~~~~~~~~~-~~~~H-~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l 294 (298)
.+ +.|.++|..+..+. .+... ...++.|+|+||+++|..+.. + |.+||..+++..
T Consensus 191 ~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~-v~~~d~~t~~~~ 257 (328)
T 3dsm_A 191 GGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--D-IWRMPVEADRVP 257 (328)
T ss_dssp CBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--S-EEEEETTCSSCC
T ss_pred CCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--E-EEEEECCCCcee
Confidence 33 78999998766544 44322 236899999999988877754 7 999999988753
No 177
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.27 E-value=1e-08 Score=90.49 Aligned_cols=203 Identities=8% Similarity=-0.006 Sum_probs=126.7
Q ss_pred CCCeEEEEEcCCCCEEEEEcC-CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeC
Q 022387 85 PPTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (298)
Q Consensus 85 ~~~V~~v~fs~dg~~lasgs~-~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~ 163 (298)
...+.+++|+++|++++++.. +++.+|+.++.+....... +...+..+.+..++++++...++.. ..+.|.+||.
T Consensus 44 ~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~i~~~~dg~l~v~~~~~~~---~~~~i~~~d~ 119 (333)
T 2dg1_A 44 GLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVS-HKANPAAIKIHKDGRLFVCYLGDFK---STGGIFAATE 119 (333)
T ss_dssp CCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEEC-SSSSEEEEEECTTSCEEEEECTTSS---SCCEEEEECT
T ss_pred CccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeC-CCCCcceEEECCCCcEEEEeCCCCC---CCceEEEEeC
Confidence 346789999999998888876 5688999887664332211 2456777777777765555432100 1257999999
Q ss_pred CCCcEEEEee---cCCceEEEEEeCCe-EEEEEC--------CeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEE
Q 022387 164 HQSRCIGELS---FRSEVRSVKLRRDR-IIVVLE--------QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVL 231 (298)
Q Consensus 164 ~~~~~~~~~~---~~~~v~~v~~~~~~-l~v~~~--------~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~l 231 (298)
.++.....+. ....+..+.++++. +.++.. +.|..||..+.+.. .+...... ...+..++++..+
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~--~~~i~~~~dg~~l 196 (333)
T 2dg1_A 120 NGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVT-PIIQNISV--ANGIALSTDEKVL 196 (333)
T ss_dssp TSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEE-EEEEEESS--EEEEEECTTSSEE
T ss_pred CCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEE-EeecCCCc--ccceEECCCCCEE
Confidence 8876543332 22357888888754 444433 34555555444432 33222122 2334445555544
Q ss_pred EEecCCCceEEEEEcCC--cceEe--------ecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 232 VCPGLQKGQVRVEHYAS--KRTKF--------IMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 232 a~sGs~dg~v~i~~~~~--~~~~~--------~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
.++.+.++.|.+|+... ..... +.++ ..+..|+++++|+++++...++. |++||. +++.+.++
T Consensus 197 ~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~-v~~~d~-~g~~~~~~ 269 (333)
T 2dg1_A 197 WVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGR-VLVFNK-RGYPIGQI 269 (333)
T ss_dssp EEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTE-EEEECT-TSCEEEEE
T ss_pred EEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCE-EEEECC-CCCEEEEE
Confidence 44466678999998853 22221 1222 46889999999999999888888 999998 57666554
No 178
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.26 E-value=6.7e-10 Score=101.25 Aligned_cols=170 Identities=9% Similarity=0.093 Sum_probs=121.5
Q ss_pred CeEEEEEcCCCCEEEEEcCCeEEEEEcCCCc-----------eEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCC
Q 022387 87 TLLHISFNQDHGCFAAGTDHGFRIYNCDPFR-----------EIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPL 155 (298)
Q Consensus 87 ~V~~v~fs~dg~~lasgs~~gi~vw~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 155 (298)
+++.+++++...+|++|+.++++||+++..+ ......+ .+ +..+.+ +++.++++. +
T Consensus 39 ~~nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~l--p~-V~~l~f--d~~~L~v~~--------~ 105 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEI--PD-VIFVCF--HGDQVLVST--------R 105 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEEC--TT-EEEEEE--ETTEEEEEE--------S
T ss_pred cccEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEeeC--CC-eeEEEE--CCCEEEEEc--------C
Confidence 6888999999999999999999999865433 1122332 44 776666 777777763 4
Q ss_pred CeEEEEeCCCCcEEEEe-ecCCceEEEEEeCCeEEEEE-CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEE
Q 022387 156 NKVMIWDDHQSRCIGEL-SFRSEVRSVKLRRDRIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVC 233 (298)
Q Consensus 156 ~~v~iWD~~~~~~~~~~-~~~~~v~~v~~~~~~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~ 233 (298)
+.|++||+.+......+ .+...+.++.+.+..++++. +|.|.+||+.+.+... +. ..+.++++++++ +++
T Consensus 106 ~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~-~~-----~~Vs~v~WSpkG--~~v 177 (388)
T 1xip_A 106 NALYSLDLEELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ-LA-----QNVTSFDVTNSQ--LAV 177 (388)
T ss_dssp SEEEEEESSSTTCEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE-EE-----ESEEEEEECSSE--EEE
T ss_pred CcEEEEEchhhhccCccceeecceeeEEecCCCEEEEECCCCEEEEEccCCcccc-cc-----CCceEEEEcCCc--eEE
Confidence 78999999875543333 33446777776655566665 6999999998777643 22 245567777766 343
Q ss_pred ecCCCceEEEEEcCCcce---Eee------c---ccccceeEEEECCCCCEEEEEeC
Q 022387 234 PGLQKGQVRVEHYASKRT---KFI------M---AHDSRIACFALTQDGQLLATSST 278 (298)
Q Consensus 234 sGs~dg~v~i~~~~~~~~---~~~------~---~H~~~V~~l~fspdg~~lAt~S~ 278 (298)
|..||.+++|+..+..+ .++ . +|...|.+|+|.+++.+|++-..
T Consensus 178 -g~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~~ 233 (388)
T 1xip_A 178 -LLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFGN 233 (388)
T ss_dssp -EETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEEC
T ss_pred -EEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEcC
Confidence 78999999998877663 344 3 47888999999999999998543
No 179
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.26 E-value=2.6e-10 Score=110.46 Aligned_cols=198 Identities=10% Similarity=-0.033 Sum_probs=118.9
Q ss_pred EEEEc--CCCCE-EEEEcCCeEEEEEcCCC----ceEEEEeee----cCCceEEEEEecCCCEEEEEeCCCC---CCCCC
Q 022387 90 HISFN--QDHGC-FAAGTDHGFRIYNCDPF----REIFRRDFE----RGGGIGVVEMLFRCNILALVGGGPD---PQYPL 155 (298)
Q Consensus 90 ~v~fs--~dg~~-lasgs~~gi~vw~~~~~----~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~d 155 (298)
...|+ |||++ ||.++++..+||.++.. +........ +...+..+.+++++..+++++.... .....
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~ 160 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVR 160 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEE
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCce
Confidence 34454 99998 88877644445554432 332222210 1234566788899998888772200 00011
Q ss_pred CeEEEEeCCC------CcEEEEe-ecCCceEEEEEeCCe--EEEEE-C--------CeEEEEEcC-CC--eEEEEEec-c
Q 022387 156 NKVMIWDDHQ------SRCIGEL-SFRSEVRSVKLRRDR--IIVVL-E--------QKIFVYNFA-DL--KLLHQIET-I 213 (298)
Q Consensus 156 ~~v~iWD~~~------~~~~~~~-~~~~~v~~v~~~~~~--l~v~~-~--------~~I~iwd~~-~~--~~i~~~~~-~ 213 (298)
.+|++||+.+ ++..... .....+..+.|+++. ++.+. + ..|++||+. ++ .....+.. +
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~ 240 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP 240 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET
T ss_pred eEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC
Confidence 5799999988 5544333 334567778898864 54443 3 379999998 56 23334433 3
Q ss_pred CCCcceEEEEeCCCCeEEEEecCCCce--EEEEEcCCcceEeecccc-cc--------eeEEEECCCCCEEEEEeCCCCE
Q 022387 214 ANPKGLCAVSQGVGSLVLVCPGLQKGQ--VRVEHYASKRTKFIMAHD-SR--------IACFALTQDGQLLATSSTKGTL 282 (298)
Q Consensus 214 ~~~~~~~~~s~~~d~~~la~sGs~dg~--v~i~~~~~~~~~~~~~H~-~~--------V~~l~fspdg~~lAt~S~Dgt~ 282 (298)
...+...+++ +|+.+++ +++.+|. |.+|+...+....+..+. .. +.+++|+|+++++++++. ++
T Consensus 241 ~~~~~~~~~s--pdg~l~~-~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~- 315 (662)
T 3azo_A 241 EEAIAQAEWA--PDGSLIV-ATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GA- 315 (662)
T ss_dssp TBCEEEEEEC--TTSCEEE-EECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SS-
T ss_pred CceEcceEEC--CCCeEEE-EECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-Cc-
Confidence 3334444544 4556554 4677784 444665455555443332 22 578999999999999998 98
Q ss_pred EEEE--ECCCCc
Q 022387 283 VRIF--NTLDGT 292 (298)
Q Consensus 283 IrIW--d~~tg~ 292 (298)
++|| |+.+++
T Consensus 316 ~~l~~~d~~~~~ 327 (662)
T 3azo_A 316 AVLGILDPESGE 327 (662)
T ss_dssp CEEEEEETTTTE
T ss_pred cEEEEEECCCCc
Confidence 9999 555554
No 180
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.25 E-value=1.5e-10 Score=114.14 Aligned_cols=192 Identities=13% Similarity=0.043 Sum_probs=122.4
Q ss_pred EEEEEcCCCCEEEEEcCC----------eEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeE
Q 022387 89 LHISFNQDHGCFAAGTDH----------GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKV 158 (298)
Q Consensus 89 ~~v~fs~dg~~lasgs~~----------gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v 158 (298)
..++|||||++||.++++ .+.+||+++++...... +.+.+....+++++..+|++. ++.|
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~--~~~~~~~~~~SPdG~~la~~~--------~~~i 134 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEER--IPNNTQWVTWSPVGHKLAYVW--------NNDI 134 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC--CCTTEEEEEECSSTTCEEEEE--------TTEE
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEccc--CCCcceeeEECCCCCEEEEEE--------CCeE
Confidence 458999999999988873 24599999876432111 345688889999999999886 4789
Q ss_pred EEEeCCCCcEEEEeecCC---ce-----------------EEEEEeCCe--EEEEE-C----------------------
Q 022387 159 MIWDDHQSRCIGELSFRS---EV-----------------RSVKLRRDR--IIVVL-E---------------------- 193 (298)
Q Consensus 159 ~iWD~~~~~~~~~~~~~~---~v-----------------~~v~~~~~~--l~v~~-~---------------------- 193 (298)
.+||+.+++..+ +...+ .+ ..+.|+++. ++... +
T Consensus 135 ~~~~~~~~~~~~-lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~ 213 (740)
T 4a5s_A 135 YVKIEPNLPSYR-ITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKT 213 (740)
T ss_dssp EEESSTTSCCEE-CCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEE
T ss_pred EEEECCCCceEE-EcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcc
Confidence 999998877543 22211 11 236787753 33321 1
Q ss_pred --------------CeEEEEEcCC---Ce--EEEEEec------cCCCcceEEEEeCCCCeEEEEe---cCCCceEEEEE
Q 022387 194 --------------QKIFVYNFAD---LK--LLHQIET------IANPKGLCAVSQGVGSLVLVCP---GLQKGQVRVEH 245 (298)
Q Consensus 194 --------------~~I~iwd~~~---~~--~i~~~~~------~~~~~~~~~~s~~~d~~~la~s---Gs~dg~v~i~~ 245 (298)
.+|++||+.+ ++ ...++.. +...+..+++++ |+.++++. +..+..|.+|+
T Consensus 214 ~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wsp--dg~~~~~~~~r~~~~~~i~~~d 291 (740)
T 4a5s_A 214 VRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWAT--QERISLQWLRRIQNYSVMDICD 291 (740)
T ss_dssp EEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEE--TTEEEEEEEESSTTEEEEEEEE
T ss_pred eeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeC--CCeEEEEEeCCCCCEEEEEEEE
Confidence 1588899987 63 2234432 323333445555 45655542 23345788899
Q ss_pred cCCcc-------eEee--ccccccee-----EEEECCCCCEEE-EEeCC-C-CEEEEEECCCCcE
Q 022387 246 YASKR-------TKFI--MAHDSRIA-----CFALTQDGQLLA-TSSTK-G-TLVRIFNTLDGTL 293 (298)
Q Consensus 246 ~~~~~-------~~~~--~~H~~~V~-----~l~fspdg~~lA-t~S~D-g-t~IrIWd~~tg~~ 293 (298)
..++. ...+ ..|...|. .++|||||+.|+ ..|.+ | ..|.+||+.++++
T Consensus 292 ~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~ 356 (740)
T 4a5s_A 292 YDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDC 356 (740)
T ss_dssp EETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSC
T ss_pred CCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCce
Confidence 87654 2222 45666655 789999999888 77643 3 2288888887654
No 181
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.23 E-value=8.5e-09 Score=89.66 Aligned_cols=194 Identities=8% Similarity=-0.077 Sum_probs=124.9
Q ss_pred CCCeEEEEEcCCCC-EEEEEcC-CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEe
Q 022387 85 PPTLLHISFNQDHG-CFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWD 162 (298)
Q Consensus 85 ~~~V~~v~fs~dg~-~lasgs~-~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD 162 (298)
..-..+++|+|+|+ +++++.. +++.+|+.+.. . ..... +...+..+.+..++.+++... .++.|.+||
T Consensus 27 ~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~-~~~~~-~~~~~~~l~~~~dg~l~v~~~-------~~~~i~~~d 96 (296)
T 3e5z_A 27 FTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-L-SPEMH-PSHHQNGHCLNKQGHLIACSH-------GLRRLERQR 96 (296)
T ss_dssp CSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-E-EEEES-SCSSEEEEEECTTCCEEEEET-------TTTEEEEEC
T ss_pred CccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-e-EEEEC-CCCCcceeeECCCCcEEEEec-------CCCeEEEEc
Confidence 34678999999998 6777776 66889998876 2 22222 345567777777777654443 347899999
Q ss_pred CCCCcEEEEeec-C----CceEEEEEeCCeEEEEE--------------------CCeEEEEEcCCCeEEEEEeccCCCc
Q 022387 163 DHQSRCIGELSF-R----SEVRSVKLRRDRIIVVL--------------------EQKIFVYNFADLKLLHQIETIANPK 217 (298)
Q Consensus 163 ~~~~~~~~~~~~-~----~~v~~v~~~~~~l~v~~--------------------~~~I~iwd~~~~~~i~~~~~~~~~~ 217 (298)
..+++....... . ..+..+.++++..+.++ .+.|..++.. ++ +..+..+....
T Consensus 97 ~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~ 174 (296)
T 3e5z_A 97 EPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKP 174 (296)
T ss_dssp STTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSE
T ss_pred CCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCCCC
Confidence 988775433221 1 23456788776433332 1345555544 33 33444332222
Q ss_pred ceEEEEeCCCCeEEEEecCCCceEEEEEcC-Ccce----EeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCc
Q 022387 218 GLCAVSQGVGSLVLVCPGLQKGQVRVEHYA-SKRT----KFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGT 292 (298)
Q Consensus 218 ~~~~~s~~~d~~~la~sGs~dg~v~i~~~~-~~~~----~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~ 292 (298)
..++ .++++.++ ++.+.++.|.+|+.. ...+ ..+..+...+..|+++++|+++++. ++. |++||.. |+
T Consensus 175 ~gi~--~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~-v~~~~~~-g~ 247 (296)
T 3e5z_A 175 NGLA--FLPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDG-VHVLTPD-GD 247 (296)
T ss_dssp EEEE--ECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTE-EEEECTT-SC
T ss_pred ccEE--ECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCe-EEEECCC-CC
Confidence 3344 45566777 457888999999885 3333 2334456678899999999988887 777 9999986 77
Q ss_pred EEEec
Q 022387 293 LLQEG 297 (298)
Q Consensus 293 ~l~~~ 297 (298)
++.++
T Consensus 248 ~~~~~ 252 (296)
T 3e5z_A 248 ELGRV 252 (296)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 76654
No 182
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.19 E-value=2.2e-08 Score=95.79 Aligned_cols=190 Identities=13% Similarity=0.118 Sum_probs=133.8
Q ss_pred CCCCEEEEEcC-CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCC--CCcEEEE
Q 022387 95 QDHGCFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH--QSRCIGE 171 (298)
Q Consensus 95 ~dg~~lasgs~-~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~--~~~~~~~ 171 (298)
+.+.++++..+ +.+.++|.++.+.+.+... ......+.+++++..+++++ .++.|.+||+. +++.+.+
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~--g~~p~~v~~SpDGr~lyv~~-------~dg~V~viD~~~~t~~~v~~ 235 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDT--GYAVHISRLSASGRYLFVIG-------RDGKVNMIDLWMKEPTTVAE 235 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEEC--SSCEEEEEECTTSCEEEEEE-------TTSEEEEEETTSSSCCEEEE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeC--CCCccceEECCCCCEEEEEc-------CCCeEEEEECCCCCCcEeEE
Confidence 44445566665 5588999999888766664 45566788899999888776 56899999996 7888888
Q ss_pred eecCCceEEEEEe----CC--eEEEEE--CCeEEEEEcCCCeEEEEEeccC----------C-CcceEEEEeCCCCeEEE
Q 022387 172 LSFRSEVRSVKLR----RD--RIIVVL--EQKIFVYNFADLKLLHQIETIA----------N-PKGLCAVSQGVGSLVLV 232 (298)
Q Consensus 172 ~~~~~~v~~v~~~----~~--~l~v~~--~~~I~iwd~~~~~~i~~~~~~~----------~-~~~~~~~s~~~d~~~la 232 (298)
+........+.++ ++ .++++. .++|.++|..+.+.++++.... . .+..+.++++ +..++
T Consensus 236 i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~--~~~~v 313 (567)
T 1qks_A 236 IKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHY--RPEFI 313 (567)
T ss_dssp EECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSS--SSEEE
T ss_pred EecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCC--CCEEE
Confidence 8876667788888 33 455554 4899999999999998887532 1 1122333333 23333
Q ss_pred EecCCCceEEEEEcCCcc-eE-eecccccceeEEEECCCCCEEEEEe-CCCCEEEEEECCCCcEEEe
Q 022387 233 CPGLQKGQVRVEHYASKR-TK-FIMAHDSRIACFALTQDGQLLATSS-TKGTLVRIFNTLDGTLLQE 296 (298)
Q Consensus 233 ~sGs~dg~v~i~~~~~~~-~~-~~~~H~~~V~~l~fspdg~~lAt~S-~Dgt~IrIWd~~tg~~l~~ 296 (298)
++-...|.|.+.|+.... +. .-.........+.|+|||++|.++. .+++ |.|+|+.+++++..
T Consensus 314 v~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~-V~ViD~~t~kl~~~ 379 (567)
T 1qks_A 314 VNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNK-LVVIDTKEGKLVAI 379 (567)
T ss_dssp EEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTE-EEEEETTTTEEEEE
T ss_pred EEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCe-EEEEECCCCcEEEE
Confidence 345778999998876542 11 1112334577899999999887765 4566 99999999988754
No 183
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.18 E-value=7.8e-10 Score=107.05 Aligned_cols=206 Identities=8% Similarity=-0.081 Sum_probs=126.2
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCC-----------eEEEEEcCC------CceEEEEe-eecCCceEEEEEecCCCEEEEE
Q 022387 84 PPPTLLHISFNQDHGCFAAGTDH-----------GFRIYNCDP------FREIFRRD-FERGGGIGVVEMLFRCNILALV 145 (298)
Q Consensus 84 ~~~~V~~v~fs~dg~~lasgs~~-----------gi~vw~~~~------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 145 (298)
+...+..++|+|||++|++++.+ .+.+|+++. .+.. ... . +...+..+.+++++..++++
T Consensus 128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~l~~~-~~~~~~~~~~SpDG~~la~~ 205 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR-ELSDD-AHRFVTGPRLSPDGRQAVWL 205 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE-ESSCS-CSSEECCCEECTTSSEEEEE
T ss_pred CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee-EEEec-CCCcccCceECCCCCEEEEE
Confidence 44578899999999999987754 477889887 4432 221 1 23344556788999988877
Q ss_pred eCCC-CCCCCCCeEEEEeCC-CC---cEEEEeec-CCceEEEEEeCCe-EEEEEC--C--eEEEEEcCCCeEEEEEeccC
Q 022387 146 GGGP-DPQYPLNKVMIWDDH-QS---RCIGELSF-RSEVRSVKLRRDR-IIVVLE--Q--KIFVYNFADLKLLHQIETIA 214 (298)
Q Consensus 146 ~~~~-~~~~~d~~v~iWD~~-~~---~~~~~~~~-~~~v~~v~~~~~~-l~v~~~--~--~I~iwd~~~~~~i~~~~~~~ 214 (298)
+... ...+...+|.+||+. ++ +....... ...+..+.|+++. +++..+ + .|.+||+.+++.......+.
T Consensus 206 ~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~ 285 (662)
T 3azo_A 206 AWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREE 285 (662)
T ss_dssp EECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSS
T ss_pred ECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccc
Confidence 6321 111123579999998 56 33333333 3578889998753 444443 4 67777776665433222221
Q ss_pred CC---c---ceEEEEeCCCCeEEEEecCCCceEEEE--EcCCcceEeecccccceeEE-EECCCCCEEEEEeCCCC-EEE
Q 022387 215 NP---K---GLCAVSQGVGSLVLVCPGLQKGQVRVE--HYASKRTKFIMAHDSRIACF-ALTQDGQLLATSSTKGT-LVR 284 (298)
Q Consensus 215 ~~---~---~~~~~s~~~d~~~la~sGs~dg~v~i~--~~~~~~~~~~~~H~~~V~~l-~fspdg~~lAt~S~Dgt-~Ir 284 (298)
.. . ....+.+.+++.+++. ++. |.+++| +...+.+..+..|...+..+ +++.+.-++++++.+.. .|.
T Consensus 286 ~~~~p~w~~~~~~~~~~~~~~~~~~-~~~-~~~~l~~~d~~~~~~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~ 363 (662)
T 3azo_A 286 EFAGPLWTPGMRWFAPLANGLIAVV-HGK-GAAVLGILDPESGELVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVV 363 (662)
T ss_dssp BSSCCCCSTTCCSEEECTTSCEEEE-EBS-SSCEEEEEETTTTEEEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEE
T ss_pred cccCccccccCceEeEeCCCEEEEE-EEc-CccEEEEEECCCCcEEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEE
Confidence 11 0 0123334445567664 666 888888 55556677888888888888 66655556666676654 144
Q ss_pred EEECCCCcE
Q 022387 285 IFNTLDGTL 293 (298)
Q Consensus 285 IWd~~tg~~ 293 (298)
+||+.++++
T Consensus 364 ~~d~~~g~~ 372 (662)
T 3azo_A 364 ELDTVTGRA 372 (662)
T ss_dssp EEETTTCCE
T ss_pred EEECCCCce
Confidence 446667764
No 184
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.18 E-value=6.5e-10 Score=99.96 Aligned_cols=197 Identities=10% Similarity=-0.003 Sum_probs=114.0
Q ss_pred EEEEcCCCCEEEEEcC-CeEEEEEcCCCceEEEEeeecCCceEE---E----------------EEecCCCEEEEEeCCC
Q 022387 90 HISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGV---V----------------EMLFRCNILALVGGGP 149 (298)
Q Consensus 90 ~v~fs~dg~~lasgs~-~gi~vw~~~~~~~~~~~~~~~~~~~~~---~----------------~~~~~~~~~~~~~~~~ 149 (298)
.+.|+|||++|+.++. +.+.+|++++.+....... +.+.... + .+.++++.+++....
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~-~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~- 162 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTV-DEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFY- 162 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC-CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHH-
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEec-ccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeec-
Confidence 3789999999988776 5588999988765433332 1110000 0 011111111111100
Q ss_pred CCCCCCCeEEEEeCCCCcEEEEeecCCceEEEEEeC-Ce--EEEEEC-------CeEEEEEcCCCeEEEEEeccCCCcce
Q 022387 150 DPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRR-DR--IIVVLE-------QKIFVYNFADLKLLHQIETIANPKGL 219 (298)
Q Consensus 150 ~~~~~d~~v~iWD~~~~~~~~~~~~~~~v~~v~~~~-~~--l~v~~~-------~~I~iwd~~~~~~i~~~~~~~~~~~~ 219 (298)
....+..|.+||+.+++..........+..+.|++ +. ++.+.+ ..|.+||+...+. ..+..+......
T Consensus 163 -~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~ 240 (396)
T 3c5m_A 163 -HTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV-RKIKEHAEGESC 240 (396)
T ss_dssp -HTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC-EESSCCCTTEEE
T ss_pred -cCCCcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce-eEeeccCCCccc
Confidence 00134679999999988766555556788889988 32 444443 3688888865542 233222111223
Q ss_pred EEEEeCCCCeEEEEecCC----CceEEEEEcCCcceEeecccccceeEEEECC-CCCEEEEEeC----------------
Q 022387 220 CAVSQGVGSLVLVCPGLQ----KGQVRVEHYASKRTKFIMAHDSRIACFALTQ-DGQLLATSST---------------- 278 (298)
Q Consensus 220 ~~~s~~~d~~~la~sGs~----dg~v~i~~~~~~~~~~~~~H~~~V~~l~fsp-dg~~lAt~S~---------------- 278 (298)
..+.+++|+..|++.+.. ++.|.+|+..++....+..... .. ++|+| ||++|+.++.
T Consensus 241 ~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~ 318 (396)
T 3c5m_A 241 THEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIEN 318 (396)
T ss_dssp EEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS-EE-EEEECSSSSEEEEEECCC----------CCCC
T ss_pred cceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC-CC-CCccCCCCceEEEecCCcceeeccccccccCC
Confidence 334455566666553322 2458889988766544332222 33 89999 9999998652
Q ss_pred CCCEEEEEECCCCcE
Q 022387 279 KGTLVRIFNTLDGTL 293 (298)
Q Consensus 279 Dgt~IrIWd~~tg~~ 293 (298)
+.. |.+||+.+++.
T Consensus 319 ~~~-i~~~d~~~~~~ 332 (396)
T 3c5m_A 319 DPF-LYVLNTKAKSA 332 (396)
T ss_dssp CCE-EEEEETTTTBC
T ss_pred CCc-EEEEecccCce
Confidence 356 99999988764
No 185
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.16 E-value=4.6e-08 Score=88.76 Aligned_cols=197 Identities=14% Similarity=0.052 Sum_probs=116.5
Q ss_pred EEEEcCCCCEEEEEc-----------CCeEEEEEcCCCceEEEEeee------cCCceEEEEEecCCCEEEEEeCCCCCC
Q 022387 90 HISFNQDHGCFAAGT-----------DHGFRIYNCDPFREIFRRDFE------RGGGIGVVEMLFRCNILALVGGGPDPQ 152 (298)
Q Consensus 90 ~v~fs~dg~~lasgs-----------~~gi~vw~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (298)
.++|+|||++|+++. ++.+.+||..+.+........ +......+.+++++..++++...
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~---- 145 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFA---- 145 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecC----
Confidence 799999999988875 245779999887765554430 01123456788888888887632
Q ss_pred CCCCeEEEEeCCCCcEEEE-eecCCceEEEEEeCCe--------------------------------------------
Q 022387 153 YPLNKVMIWDDHQSRCIGE-LSFRSEVRSVKLRRDR-------------------------------------------- 187 (298)
Q Consensus 153 ~~d~~v~iWD~~~~~~~~~-~~~~~~v~~v~~~~~~-------------------------------------------- 187 (298)
.++.|.++| .+++.+.+ +.....+.-....+..
T Consensus 146 -~~~~v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~ 223 (373)
T 2mad_H 146 -AGPAVGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANK 223 (373)
T ss_pred -CCCeEEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccCCcceeecceeEec
Confidence 247899999 99988877 6543221111111111
Q ss_pred ----EEEEECCeEEEEEcCCC--eEEEEEeccC--------CCcc--eEEEEeCCCCeEEEEecC---------CCceEE
Q 022387 188 ----IIVVLEQKIFVYNFADL--KLLHQIETIA--------NPKG--LCAVSQGVGSLVLVCPGL---------QKGQVR 242 (298)
Q Consensus 188 ----l~v~~~~~I~iwd~~~~--~~i~~~~~~~--------~~~~--~~~~s~~~d~~~la~sGs---------~dg~v~ 242 (298)
+++...+.+.+.|+... +.+..+.... .+.+ .++++++++..+++ .. ..+.|.
T Consensus 224 ~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~--~~~~~~~~~~~~~~~V~ 301 (373)
T 2mad_H 224 SGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLL--TSEQSAWKLHAAAKEVT 301 (373)
T ss_pred CCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEE--eccCCcccccCCCCeEE
Confidence 11111234444444322 1122221100 1111 24444444322332 22 235788
Q ss_pred EEEcCCcce-EeecccccceeEEEECCCCC-EEEEEe-CCCCEEEEEECCCCcEEEe
Q 022387 243 VEHYASKRT-KFIMAHDSRIACFALTQDGQ-LLATSS-TKGTLVRIFNTLDGTLLQE 296 (298)
Q Consensus 243 i~~~~~~~~-~~~~~H~~~V~~l~fspdg~-~lAt~S-~Dgt~IrIWd~~tg~~l~~ 296 (298)
+.|..+.++ .++. -......|+|+|||+ +|.++. .+++ |.|||+.+++.+++
T Consensus 302 VID~~t~~vv~~i~-~g~~p~~i~~s~Dg~~~l~v~~~~~~~-V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 302 SVTGLVGQTSSQIS-LGHDVDAISVAQDGGPDLYALSAGTEV-LHIYDAGAGDQDQS 356 (373)
T ss_pred EEECCCCEEEEEEE-CCCCcCeEEECCCCCeEEEEEcCCCCe-EEEEECCCCCEEee
Confidence 888877655 4453 233689999999999 788877 4888 99999999998876
No 186
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.11 E-value=6.8e-09 Score=88.57 Aligned_cols=196 Identities=8% Similarity=-0.032 Sum_probs=126.3
Q ss_pred CeEEEEEcCCCCEEEEEcCCeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCC
Q 022387 87 TLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQS 166 (298)
Q Consensus 87 ~V~~v~fs~dg~~lasgs~~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~ 166 (298)
.+.+++++++|+++++..++++.+|+.+..... ............+.+..+++.++... .++.|.+||..+.
T Consensus 68 ~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~-~~~~~~~~~p~~i~~~~~g~l~v~~~-------~~~~i~~~~~~~~ 139 (270)
T 1rwi_B 68 QPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQT-VLPFDGLNYPEGLAVDTQGAVYVADR-------GNNRVVKLAAGSK 139 (270)
T ss_dssp SCCCEEECTTCCEEEEETTTEEEEECTTCSCCE-ECCCCSCSSEEEEEECTTCCEEEEEG-------GGTEEEEECTTCC
T ss_pred CcceeEECCCCCEEEEcCCCEEEEEeCCCceEe-eeecCCcCCCcceEECCCCCEEEEEC-------CCCEEEEEECCCc
Confidence 567899999999777666567888987664432 12111123456666666666444333 3478999987665
Q ss_pred cEEEEe-ecCCceEEEEEeCC-eEEEEE--CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEecCCCceEE
Q 022387 167 RCIGEL-SFRSEVRSVKLRRD-RIIVVL--EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVR 242 (298)
Q Consensus 167 ~~~~~~-~~~~~v~~v~~~~~-~l~v~~--~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs~dg~v~ 242 (298)
...... .....+..+.++++ .+.++. ++.|.+||............+. .....+..++++.+++ +...++.|.
T Consensus 140 ~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~--~~p~~i~~d~~g~l~v-~~~~~~~v~ 216 (270)
T 1rwi_B 140 TQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDI--TAPWGIAVDEAGTVYV-TEHNTNQVV 216 (270)
T ss_dssp SCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSC--CSEEEEEECTTCCEEE-EETTTSCEE
T ss_pred eeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCC--CCceEEEECCCCCEEE-EECCCCcEE
Confidence 433221 11235667888763 455554 3799999987655432212111 2334555566666665 356688899
Q ss_pred EEEcCCcceEeec-ccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEE
Q 022387 243 VEHYASKRTKFIM-AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLL 294 (298)
Q Consensus 243 i~~~~~~~~~~~~-~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l 294 (298)
+++........+. .+...+.+|+++++|+++++.+.+++ |+++++...+..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~-v~~~~~~~~~~~ 268 (270)
T 1rwi_B 217 KLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDR-VVKLTSLEHHHH 268 (270)
T ss_dssp EECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTE-EEEECCCGGGSC
T ss_pred EEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCE-EEEEcCCCcccc
Confidence 9988765544332 34467999999999999999999998 999998876654
No 187
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.11 E-value=1.9e-09 Score=98.28 Aligned_cols=146 Identities=14% Similarity=0.197 Sum_probs=106.5
Q ss_pred CceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCCc-----------EEEEeecCCceEEEEEeCCeEEEEECCeE
Q 022387 128 GGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSR-----------CIGELSFRSEVRSVKLRRDRIIVVLEQKI 196 (298)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~-----------~~~~~~~~~~v~~v~~~~~~l~v~~~~~I 196 (298)
..+..+++.....+++.++. ..+++|+....+ ....+.... |..+.|+...++++.++.|
T Consensus 38 ~~~nlLais~~~gll~a~~~--------~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~fd~~~L~v~~~~~l 108 (388)
T 1xip_A 38 ASLQNLDISNSKSLFVAASG--------SKAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCFHGDQVLVSTRNAL 108 (388)
T ss_dssp SCCBCEEEETTTTEEEEEET--------TEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEEETTEEEEEESSEE
T ss_pred ccccEEEEcCCCCEEEEeCC--------CEEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEECCCEEEEEcCCcE
Confidence 35677778877877777662 468889854322 223445556 9999997778888888999
Q ss_pred EEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEecCCCceEEEEEcCCcceEeecccccceeEEEECCCCCEEEEE
Q 022387 197 FVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATS 276 (298)
Q Consensus 197 ~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~~~~~~~~H~~~V~~l~fspdg~~lAt~ 276 (298)
++||+.+.....++..+...+ ..+.+-+. . +|+ ++.||.|.+|+++...... +...|+|+||||+| ++.|
T Consensus 109 ~v~dv~sl~~~~~~~~~~~~v--~~i~~~~p-~-~av-~~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG--~~vg 178 (388)
T 1xip_A 109 YSLDLEELSEFRTVTSFEKPV--FQLKNVNN-T-LVI-LNSVNDLSALDLRTKSTKQ---LAQNVTSFDVTNSQ--LAVL 178 (388)
T ss_dssp EEEESSSTTCEEEEEECSSCE--EEEEECSS-E-EEE-EETTSEEEEEETTTCCEEE---EEESEEEEEECSSE--EEEE
T ss_pred EEEEchhhhccCccceeecce--eeEEecCC-C-EEE-EECCCCEEEEEccCCcccc---ccCCceEEEEcCCc--eEEE
Confidence 999998776666666655443 34444332 2 443 6899999999998765433 56789999999999 6788
Q ss_pred eCCCCEEEEEECCCCcE
Q 022387 277 STKGTLVRIFNTLDGTL 293 (298)
Q Consensus 277 S~Dgt~IrIWd~~tg~~ 293 (298)
..||+ |++|+...+++
T Consensus 179 ~~dg~-i~~~~~~~~~~ 194 (388)
T 1xip_A 179 LKDRS-FQSFAWRNGEM 194 (388)
T ss_dssp ETTSC-EEEEEEETTEE
T ss_pred EcCCc-EEEEcCCCccc
Confidence 89999 99999887764
No 188
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.09 E-value=4.4e-09 Score=92.83 Aligned_cols=192 Identities=13% Similarity=0.098 Sum_probs=119.6
Q ss_pred CCeEEEEEcCCCCEEEEEc-CCeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCC
Q 022387 86 PTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (298)
Q Consensus 86 ~~V~~v~fs~dg~~lasgs-~~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~ 164 (298)
..|.+++|++++..++..+ ++.+++|.- +......- +......+.+..++.++++.. .++.|.+||..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~g~l~~~~~-------~~~~i~~~d~~ 74 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTITA---EPWLEISK-KGLQLEGLNFDRQGQLFLLDV-------FEGNIFKINPE 74 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEEEC---EEEEEEES-SCCCEEEEEECTTSCEEEEET-------TTCEEEEECTT
T ss_pred cccceeeecCCccceeEEeecccCccccc---ceeEEEec-cCccccCcEECCCCCEEEEEC-------CCCEEEEEeCC
Confidence 3577788998887666544 456778822 22212211 233456667777776444433 45889999998
Q ss_pred CCcEEEEe-ecCCceEEEEEeCC-eEEEEEC------CeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEecC
Q 022387 165 QSRCIGEL-SFRSEVRSVKLRRD-RIIVVLE------QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGL 236 (298)
Q Consensus 165 ~~~~~~~~-~~~~~v~~v~~~~~-~l~v~~~------~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs 236 (298)
+++..... .....+.++.++++ .+.++.. +.|.+||..+.+....+...........+..++++.+++. ..
T Consensus 75 ~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~-~~ 153 (333)
T 2dg1_A 75 TKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFT-DF 153 (333)
T ss_dssp TCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEE-EC
T ss_pred CCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEE-ec
Confidence 88765443 33457889999865 4555543 3899999877665433332212223445566667777764 33
Q ss_pred C------CceEEEEEcCCcceEeecccccceeEEEECCCCCEE-EEEeCCCCEEEEEECCC
Q 022387 237 Q------KGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLL-ATSSTKGTLVRIFNTLD 290 (298)
Q Consensus 237 ~------dg~v~i~~~~~~~~~~~~~H~~~V~~l~fspdg~~l-At~S~Dgt~IrIWd~~t 290 (298)
. .+.|..++.+.+....+..+...++.++|+|||++| ++.+.++. |++||+.+
T Consensus 154 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~-i~~~d~~~ 213 (333)
T 2dg1_A 154 RGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANR-LHRIALED 213 (333)
T ss_dssp CCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTE-EEEEEECT
T ss_pred cccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCe-EEEEEecC
Confidence 2 355666666555555444455568999999999855 55566777 99999974
No 189
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.08 E-value=8.5e-09 Score=100.86 Aligned_cols=205 Identities=12% Similarity=0.016 Sum_probs=125.5
Q ss_pred CCCCeEEEEEcCCCCEEE-----EEcC-CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCC------
Q 022387 84 PPPTLLHISFNQDHGCFA-----AGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDP------ 151 (298)
Q Consensus 84 ~~~~V~~v~fs~dg~~la-----sgs~-~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 151 (298)
|...+.+++|||||++|| .|++ ..|++||+++++.+....+ .......+.|++++..++.++.....
T Consensus 119 ~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~-~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~ 197 (695)
T 2bkl_A 119 GTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVI-EGGKYATPKWTPDSKGFYYEWLPTDPSIKVDE 197 (695)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCB-SCCTTCCCEECTTSSEEEEEECCCCTTSCGGG
T ss_pred CCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCccc-CcccccceEEecCCCEEEEEEecCCCCCcccc
Confidence 334689999999999999 3443 3488999998775301111 11112567889999988887732100
Q ss_pred CCCCCeEEEEeCCCCc----EEEEeecC-CceEEEEEeCC--eEEEEE-CC----eEEEEEcCCCeEEEEEeccCCCcce
Q 022387 152 QYPLNKVMIWDDHQSR----CIGELSFR-SEVRSVKLRRD--RIIVVL-EQ----KIFVYNFADLKLLHQIETIANPKGL 219 (298)
Q Consensus 152 ~~~d~~v~iWD~~~~~----~~~~~~~~-~~v~~v~~~~~--~l~v~~-~~----~I~iwd~~~~~~i~~~~~~~~~~~~ 219 (298)
......|++|++.+++ .+.+...+ ..+..+.++++ .+++.. ++ .|++|+..+++ ...+..+......
T Consensus 198 ~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~ 276 (695)
T 2bkl_A 198 RPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-FRLLVKGVGAKYE 276 (695)
T ss_dssp GGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-CEEEEECSSCCEE
T ss_pred CCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-eEEeecCCCceEE
Confidence 0012349999999876 22222222 35778889875 344433 33 67777665444 3445544433322
Q ss_pred EEEEeCCCCeEEEEecC---CCceEEEEEcCCcc---eEeeccc--ccceeEEEECCCCCEEEEEeCCCCEEEEEECC-C
Q 022387 220 CAVSQGVGSLVLVCPGL---QKGQVRVEHYASKR---TKFIMAH--DSRIACFALTQDGQLLATSSTKGTLVRIFNTL-D 290 (298)
Q Consensus 220 ~~~s~~~d~~~la~sGs---~dg~v~i~~~~~~~---~~~~~~H--~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~-t 290 (298)
.. .+++ .+++. .. .++.|.+|+..... ...+..| ...|..++|+ ++.++++...|+. .+||.+. +
T Consensus 277 ~~-~~~g--~l~~~-s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~-~~l~~~~~~ 350 (695)
T 2bkl_A 277 VH-AWKD--RFYVL-TDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDAT-SEVRVATLK 350 (695)
T ss_dssp EE-EETT--EEEEE-ECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTE-EEEEEEETT
T ss_pred EE-ecCC--cEEEE-ECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCE-EEEEEEeCC
Confidence 22 2443 44432 33 36788889986543 2444433 4568999998 7889999999998 9998765 4
Q ss_pred CcEEEe
Q 022387 291 GTLLQE 296 (298)
Q Consensus 291 g~~l~~ 296 (298)
|+.+++
T Consensus 351 g~~~~~ 356 (695)
T 2bkl_A 351 GKPVRT 356 (695)
T ss_dssp CCEEEE
T ss_pred CCeeEE
Confidence 665544
No 190
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.05 E-value=1.4e-07 Score=81.94 Aligned_cols=196 Identities=12% Similarity=0.104 Sum_probs=129.3
Q ss_pred CeEEEEEcCCCCEEEEEcCCeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCC
Q 022387 87 TLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQS 166 (298)
Q Consensus 87 ~V~~v~fs~dg~~lasgs~~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~ 166 (298)
.+.++.++|+|++|+ ..++++..||. +++.+..........+..+....+++.++..++ .++.|..+|. ++
T Consensus 38 ~~~~~~~~pdG~ilv-s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~------~~~~v~~vd~-~G 108 (276)
T 3no2_A 38 ECNSVAATKAGEILF-SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCG------HPSTILEVNM-KG 108 (276)
T ss_dssp CCCEEEECTTSCEEE-ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEES------TTEEEEEECT-TS
T ss_pred CCcCeEECCCCCEEE-eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecC------CCCEEEEEeC-CC
Confidence 577899999999988 44677889988 677766665411134555666778887776652 1356777775 67
Q ss_pred cEEEEeecCC-------ceEEEEEeC--CeEEEEE-CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEecC
Q 022387 167 RCIGELSFRS-------EVRSVKLRR--DRIIVVL-EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGL 236 (298)
Q Consensus 167 ~~~~~~~~~~-------~v~~v~~~~--~~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs 236 (298)
+.+.++.... ....+.+.+ +.+++.. ++.|.+||.. ++.+.++.....+.. .. ..+++.++++ +.
T Consensus 109 k~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~~~~-~~--~~~~g~~~v~-~~ 183 (276)
T 3no2_A 109 EVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSGTPFS-SA--FLDNGDCLVA-CG 183 (276)
T ss_dssp CEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSSCCCE-EE--ECTTSCEEEE-CB
T ss_pred CEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCCCccc-ee--EcCCCCEEEE-eC
Confidence 7776665321 222334443 3343333 4799999987 999999887544433 33 3455577764 67
Q ss_pred CCceEEEEEcCCc-ceEeecccc------cceeEEEECCCCCEEEEEeCC--------CCEEEEEEC-CCCcEEEec
Q 022387 237 QKGQVRVEHYASK-RTKFIMAHD------SRIACFALTQDGQLLATSSTK--------GTLVRIFNT-LDGTLLQEG 297 (298)
Q Consensus 237 ~dg~v~i~~~~~~-~~~~~~~H~------~~V~~l~fspdg~~lAt~S~D--------gt~IrIWd~-~tg~~l~~~ 297 (298)
.++.|..++.++. .+.++..+. ..+..++..++|.++++.+.. +. .+++.+ .+|+++.+|
T Consensus 184 ~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~-~~~~~~~~~g~~~W~~ 259 (276)
T 3no2_A 184 DAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKH-PQLVEIDSEGKVVWQL 259 (276)
T ss_dssp TTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCC-CSEEEECTTSBEEEEE
T ss_pred CCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccCccccccccCC-ceEEEECCCCCEEEEe
Confidence 7778888998844 444665432 238899999999999998521 23 457776 678888776
No 191
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.04 E-value=9.4e-09 Score=100.56 Aligned_cols=199 Identities=12% Similarity=-0.033 Sum_probs=122.3
Q ss_pred EEEEEcCCCCEEEEEcC-Ce-------------EEEEEcCCCce--EEEEeee-cCCceEEEEEecCCCEEEEEeCCCCC
Q 022387 89 LHISFNQDHGCFAAGTD-HG-------------FRIYNCDPFRE--IFRRDFE-RGGGIGVVEMLFRCNILALVGGGPDP 151 (298)
Q Consensus 89 ~~v~fs~dg~~lasgs~-~g-------------i~vw~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (298)
..++|+|||+.|+.++. .+ +++|++.+... ....... +...+..+.+++++..+++.+....
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~- 249 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGW- 249 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETT-
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCC-
Confidence 67899999999887765 33 88999987652 2222210 1234567778889988887763210
Q ss_pred CCCCCeEEEEeCCCCcEEEEeecCCceEEEEEeCCeEEEEEC-----CeEEEEEcCCCeE--EEEEeccCCCcceEEEEe
Q 022387 152 QYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVVLE-----QKIFVYNFADLKL--LHQIETIANPKGLCAVSQ 224 (298)
Q Consensus 152 ~~~d~~v~iWD~~~~~~~~~~~~~~~v~~v~~~~~~l~v~~~-----~~I~iwd~~~~~~--i~~~~~~~~~~~~~~~s~ 224 (298)
....|.+||..+++..........+....++...+++.++ ..|.+||+.+++. ...+..+.....+..+++
T Consensus 250 --~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~ 327 (695)
T 2bkl_A 250 --SENDVYWKRPGEKDFRLLVKGVGAKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSI 327 (695)
T ss_dssp --TEEEEEEECTTCSSCEEEEECSSCCEEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEE
T ss_pred --CceEEEEEcCCCCceEEeecCCCceEEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEE
Confidence 1136777776555543333333344444455444555553 5899999976542 234443321222233333
Q ss_pred CCCCeEEEEecCCCceEEEEEcC--CcceEeeccc-ccceeEEEECCCCCEEE----EEeCCCCEEEEEECCCCcE
Q 022387 225 GVGSLVLVCPGLQKGQVRVEHYA--SKRTKFIMAH-DSRIACFALTQDGQLLA----TSSTKGTLVRIFNTLDGTL 293 (298)
Q Consensus 225 ~~d~~~la~sGs~dg~v~i~~~~--~~~~~~~~~H-~~~V~~l~fspdg~~lA----t~S~Dgt~IrIWd~~tg~~ 293 (298)
. ++.+++ +...||..++|.+. .+....+..+ .+.|..++++|+++.|+ +...+++ |++||+.+|+.
T Consensus 328 ~-~~~lv~-~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~-v~~~d~~~g~~ 400 (695)
T 2bkl_A 328 V-GGHLSL-EYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQ-IYKTSVSTGKS 400 (695)
T ss_dssp E-TTEEEE-EEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEE-EEEEETTTCCE
T ss_pred E-CCEEEE-EEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCE-EEEEECCCCcE
Confidence 3 335555 57889988886554 4445556555 67789999999998777 3334577 99999998864
No 192
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.03 E-value=2.1e-07 Score=80.73 Aligned_cols=203 Identities=9% Similarity=-0.015 Sum_probs=122.4
Q ss_pred CCCCeEEEEEcCCCCEEEEEcC-CeEEEEEcCCCceEEEEeee---cCCceEEEEEecCCCEEEEEe--CCC--------
Q 022387 84 PPPTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFE---RGGGIGVVEMLFRCNILALVG--GGP-------- 149 (298)
Q Consensus 84 ~~~~V~~v~fs~dg~~lasgs~-~gi~vw~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~--~~~-------- 149 (298)
+...+.+++|++||+++++... +++.+|+..+++........ ....+..+.+..+++++++.. +..
T Consensus 67 ~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~ 146 (296)
T 3e5z_A 67 PSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGG 146 (296)
T ss_dssp SCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCC
T ss_pred CCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccc
Confidence 3457899999999998888765 77899998776543222110 011223466667776555422 100
Q ss_pred CCCCCCCeEEEEeCCCCcEEEEeecCCceEEEEEeCCe-EEEEE--CCeEEEEEcC-CCeE---EEEEeccCCCcceEEE
Q 022387 150 DPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDR-IIVVL--EQKIFVYNFA-DLKL---LHQIETIANPKGLCAV 222 (298)
Q Consensus 150 ~~~~~d~~v~iWD~~~~~~~~~~~~~~~v~~v~~~~~~-l~v~~--~~~I~iwd~~-~~~~---i~~~~~~~~~~~~~~~ 222 (298)
......+.|..+|.. ++.............++++++. ++++. ++.|.+|++. +++. ...+..+...... +
T Consensus 147 ~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~--i 223 (296)
T 3e5z_A 147 EMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDG--L 223 (296)
T ss_dssp CCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCS--E
T ss_pred cccCCCcEEEEECCC-CCEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCe--E
Confidence 000012355556655 4443333333456788898753 22443 3799999996 4544 3333111111223 4
Q ss_pred EeCCCCeEEEEecCCCceEEEEEcCCcceEeecccccceeEEEE-CCCCCEEEEEeCCCCEEEEEECCCCcEEE
Q 022387 223 SQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFAL-TQDGQLLATSSTKGTLVRIFNTLDGTLLQ 295 (298)
Q Consensus 223 s~~~d~~~la~sGs~dg~v~i~~~~~~~~~~~~~H~~~V~~l~f-spdg~~lAt~S~Dgt~IrIWd~~tg~~l~ 295 (298)
..++++.++++ . ++.|.+|+.+.+.+..+..+.. +++++| +|+++.|..++.++ +--++..++++.+
T Consensus 224 ~~d~~G~l~v~-~--~~~v~~~~~~g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~--l~~~~~~~~~~~~ 291 (296)
T 3e5z_A 224 RVDAGGLIWAS-A--GDGVHVLTPDGDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE--FWSIETNVRGLEH 291 (296)
T ss_dssp EEBTTSCEEEE-E--TTEEEEECTTSCEEEEEECSSC-CCEEEEESTTSCEEEEEETTE--EEEEECSCCBCCC
T ss_pred EECCCCCEEEE-c--CCeEEEECCCCCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCe--EEEEEcccccccc
Confidence 44556677764 3 7889999988666667777777 999999 69999888888664 4455777766543
No 193
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.02 E-value=1.6e-07 Score=86.19 Aligned_cols=196 Identities=12% Similarity=0.079 Sum_probs=127.6
Q ss_pred CCeEEEEEcCCCCEEEEEcC-CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCC
Q 022387 86 PTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (298)
Q Consensus 86 ~~V~~v~fs~dg~~lasgs~-~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~ 164 (298)
.....++|+++|+++++... ..|++|+.+.......... ..... +.+..+++.++++... ....|.+||..
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~--~~~~~-ia~~~~g~~l~~~d~~-----~~~~I~~~d~~ 202 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG--FKGGK-PAVTKDKQRVYSIGWE-----GTHTVYVYMKA 202 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET--CCBCB-CEECTTSSEEEEEBSS-----TTCEEEEEEGG
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc--CCCCc-eeEecCCCcEEEEecC-----CCceEEEEEcC
Confidence 36889999999997777765 5688999887665433331 22223 7777888877776632 11279999987
Q ss_pred CCcEEEEe----e-cCCceEEEEEeC-C-eEEEEE-CCeEEEEEcCCCeEEEEEe-----ccCCCc--ceEEEEeCCCCe
Q 022387 165 QSRCIGEL----S-FRSEVRSVKLRR-D-RIIVVL-EQKIFVYNFADLKLLHQIE-----TIANPK--GLCAVSQGVGSL 229 (298)
Q Consensus 165 ~~~~~~~~----~-~~~~v~~v~~~~-~-~l~v~~-~~~I~iwd~~~~~~i~~~~-----~~~~~~--~~~~~s~~~d~~ 229 (298)
.+.....+ . ....+.++++++ + .++++. ++.|+.||..+... ..+. ...... .-++++++ ++.
T Consensus 203 ~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~-~~~~~~~~~g~~~~~P~~~ia~~p~-~g~ 280 (409)
T 3hrp_A 203 SGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEV-TLIKQLELSGSLGTNPGPYLIYYFV-DSN 280 (409)
T ss_dssp GTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCE-EEEEECCCCSCCCCSSCCEEEEETT-TTE
T ss_pred CCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCE-EEEecccccCCCCCCccccEEEeCC-CCE
Confidence 76544343 2 224567788887 3 444532 36899999976653 2331 111111 14555553 245
Q ss_pred EEEEecCCCceEEEEEcCCcceEeecccc---------------cceeEEEECCCCCEEEEEe-CCCCEEEEEECCCCcE
Q 022387 230 VLVCPGLQKGQVRVEHYASKRTKFIMAHD---------------SRIACFALTQDGQLLATSS-TKGTLVRIFNTLDGTL 293 (298)
Q Consensus 230 ~la~sGs~dg~v~i~~~~~~~~~~~~~H~---------------~~V~~l~fspdg~~lAt~S-~Dgt~IrIWd~~tg~~ 293 (298)
+++ +...++.|+.++.... ...+.++. .....|+|+|+|+++++-+ .+++ |++|++.+|++
T Consensus 281 lyv-~d~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~-I~~~~~~~G~v 357 (409)
T 3hrp_A 281 FYM-SDQNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYC-LRKLDILDGYV 357 (409)
T ss_dssp EEE-EETTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCE-EEEEETTTTEE
T ss_pred EEE-EeCCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCE-EEEEECCCCEE
Confidence 555 4677888988887655 33343332 3589999999999888888 7888 99999888865
Q ss_pred E
Q 022387 294 L 294 (298)
Q Consensus 294 l 294 (298)
.
T Consensus 358 ~ 358 (409)
T 3hrp_A 358 S 358 (409)
T ss_dssp E
T ss_pred E
Confidence 3
No 194
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.02 E-value=4.8e-07 Score=86.53 Aligned_cols=192 Identities=14% Similarity=0.062 Sum_probs=127.0
Q ss_pred CCeEEEEEcCCCCEEEEEcCC-eEEEEEcC--CCceEEEEeeecCCceEEEEEe----cCCCEEEEEeCCCCCCCCCCeE
Q 022387 86 PTLLHISFNQDHGCFAAGTDH-GFRIYNCD--PFREIFRRDFERGGGIGVVEML----FRCNILALVGGGPDPQYPLNKV 158 (298)
Q Consensus 86 ~~V~~v~fs~dg~~lasgs~~-gi~vw~~~--~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~d~~v 158 (298)
..+.++.|+|||+++++++++ .+.+||+. +.+.+..... ......+.++ +++..++++.. .+++|
T Consensus 197 ~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~--G~~P~~ia~s~~~~pDGk~l~v~n~------~~~~v 268 (567)
T 1qks_A 197 YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI--GSEARSIETSKMEGWEDKYAIAGAY------WPPQY 268 (567)
T ss_dssp SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC--CSEEEEEEECCSTTCTTTEEEEEEE------ETTEE
T ss_pred CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec--CCCCceeEEccccCCCCCEEEEEEc------cCCeE
Confidence 367799999999999988875 57899995 6666554443 4456677777 57877777662 46899
Q ss_pred EEEeCCCCcEEEEeecC------------CceEEEEEeCC--eEEEEE--CCeEEEEEcCCCeEE--EEEeccCCCcceE
Q 022387 159 MIWDDHQSRCIGELSFR------------SEVRSVKLRRD--RIIVVL--EQKIFVYNFADLKLL--HQIETIANPKGLC 220 (298)
Q Consensus 159 ~iWD~~~~~~~~~~~~~------------~~v~~v~~~~~--~l~v~~--~~~I~iwd~~~~~~i--~~~~~~~~~~~~~ 220 (298)
.|+|..+.+.+..+... ..+..+..+++ .+++.. .++|.++|..+.+.+ .++.... ..-
T Consensus 269 ~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~---~~~ 345 (567)
T 1qks_A 269 VIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAER---FLH 345 (567)
T ss_dssp EEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCS---SEE
T ss_pred EEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccc---ccc
Confidence 99999999888776532 14566666543 333333 389999998765432 2332221 222
Q ss_pred EEEeCCCCeEEEEecCCCceEEEEEcCCcceE-eec-----ccccceeEEEECCC-CCEEEEEe-CCCCEEEEEECCC
Q 022387 221 AVSQGVGSLVLVCPGLQKGQVRVEHYASKRTK-FIM-----AHDSRIACFALTQD-GQLLATSS-TKGTLVRIFNTLD 290 (298)
Q Consensus 221 ~~s~~~d~~~la~sGs~dg~v~i~~~~~~~~~-~~~-----~H~~~V~~l~fspd-g~~lAt~S-~Dgt~IrIWd~~t 290 (298)
.+.+++++.++.++...++.|.++|.++.++. .+. .|.+.-..+ ++|+ |..++|+. .+++ |.|+|..+
T Consensus 346 d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~-Vsvid~~~ 421 (567)
T 1qks_A 346 DGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDS-VALIGTDP 421 (567)
T ss_dssp EEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSE-EEEEECCT
T ss_pred CceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCe-EEEecCCC
Confidence 44556666777665667789999999877643 222 243222122 5887 56667764 3577 99999988
No 195
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.01 E-value=2.3e-07 Score=80.65 Aligned_cols=202 Identities=13% Similarity=0.099 Sum_probs=120.5
Q ss_pred CCeEEEEEcCC-CCEEEEEcCCeEEEEEcCCCceEEE-Eeee---cCCceEEEEEecCCCEEEEEeCCC--------CCC
Q 022387 86 PTLLHISFNQD-HGCFAAGTDHGFRIYNCDPFREIFR-RDFE---RGGGIGVVEMLFRCNILALVGGGP--------DPQ 152 (298)
Q Consensus 86 ~~V~~v~fs~d-g~~lasgs~~gi~vw~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~--------~~~ 152 (298)
..+.+++++++ |+++++...+++.+|+.+ .+.... .... ....+..+.+..+++..+...+.. ...
T Consensus 71 ~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~ 149 (314)
T 1pjx_A 71 GIPAGCQCDRDANQLFVADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQ 149 (314)
T ss_dssp CCEEEEEECSSSSEEEEEETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTS
T ss_pred CCCceEEEecCCCcEEEEECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCccccccccccccc
Confidence 46899999999 887777666788899987 443221 1100 012245566666666554433110 000
Q ss_pred CCCCeEEEEeCCCCcEEEEeecCCceEEEEEe----CCe--EEEEE--CCeEEEEEcC-CCeEE--EEEeccC-CC-cce
Q 022387 153 YPLNKVMIWDDHQSRCIGELSFRSEVRSVKLR----RDR--IIVVL--EQKIFVYNFA-DLKLL--HQIETIA-NP-KGL 219 (298)
Q Consensus 153 ~~d~~v~iWD~~~~~~~~~~~~~~~v~~v~~~----~~~--l~v~~--~~~I~iwd~~-~~~~i--~~~~~~~-~~-~~~ 219 (298)
...+.|..||.. ++.............+.++ ++. +.++. ++.|.+||+. +++.. ..+.... .. ...
T Consensus 150 ~~~~~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p 228 (314)
T 1pjx_A 150 EKFGSIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGA 228 (314)
T ss_dssp SSCEEEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEE
T ss_pred CCCCeEEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCC
Confidence 001457777765 5543333333345677888 764 45554 3799999985 44321 1121111 11 223
Q ss_pred EEEEeCCCCeEEEEecCCCceEEEEEcCC-cceEeecccccceeEEEECCCCC-EEEEEeCCCCEEEEEECCCC
Q 022387 220 CAVSQGVGSLVLVCPGLQKGQVRVEHYAS-KRTKFIMAHDSRIACFALTQDGQ-LLATSSTKGTLVRIFNTLDG 291 (298)
Q Consensus 220 ~~~s~~~d~~~la~sGs~dg~v~i~~~~~-~~~~~~~~H~~~V~~l~fspdg~-~lAt~S~Dgt~IrIWd~~tg 291 (298)
..+..++++.++++ ...++.|.+|+.++ +....+..+...+.+++|+|+|+ ++++...++. |.+|++...
T Consensus 229 ~~i~~d~~G~l~v~-~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~-l~~~~~~~~ 300 (314)
T 1pjx_A 229 DGMDFDEDNNLLVA-NWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNA-VWKFEWQRN 300 (314)
T ss_dssp EEEEEBTTCCEEEE-EETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTE-EEEEECSSC
T ss_pred CceEECCCCCEEEE-EcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCe-EEEEeCCCC
Confidence 34555666677763 45678888898874 33445666667899999999999 5666666777 999998753
No 196
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.01 E-value=2.7e-07 Score=80.23 Aligned_cols=199 Identities=8% Similarity=0.018 Sum_probs=119.7
Q ss_pred CeEEEEEcCCCCEEEE-------Ec-CCeEEEEEcCCCceEEEEee---ecCCceEEEEEecCCCEEEEEeCCCCCCCCC
Q 022387 87 TLLHISFNQDHGCFAA-------GT-DHGFRIYNCDPFREIFRRDF---ERGGGIGVVEMLFRCNILALVGGGPDPQYPL 155 (298)
Q Consensus 87 ~V~~v~fs~dg~~las-------gs-~~gi~vw~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 155 (298)
...+++|+++|.++++ +. ++++.+|+..+.+......- .+...+..+.+..+...+.++. ..
T Consensus 19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~-------~~ 91 (314)
T 1pjx_A 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVAD-------MR 91 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEE-------TT
T ss_pred CccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEE-------CC
Confidence 5678999999998877 34 46688998776654322110 0123455555655523344444 22
Q ss_pred CeEEEEeCCCCcEEEE-eec-----CCceEEEEEeCC-eEEEEEC-----------------CeEEEEEcCCCeEEEEEe
Q 022387 156 NKVMIWDDHQSRCIGE-LSF-----RSEVRSVKLRRD-RIIVVLE-----------------QKIFVYNFADLKLLHQIE 211 (298)
Q Consensus 156 ~~v~iWD~~~~~~~~~-~~~-----~~~v~~v~~~~~-~l~v~~~-----------------~~I~iwd~~~~~~i~~~~ 211 (298)
+.|.+||.. ++.... ... ...+..+.++++ .+.++.. +.|..||.. ++......
T Consensus 92 ~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~ 169 (314)
T 1pjx_A 92 LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT 169 (314)
T ss_dssp TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE
T ss_pred CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc
Confidence 469999998 665432 221 124678888765 4555543 346666654 44332222
Q ss_pred ccCCCcceEEEE--eCCCCeEEEEecCCCceEEEEEcC-Ccc------eEeecccc-cceeEEEECCCCCEEEEEeCCCC
Q 022387 212 TIANPKGLCAVS--QGVGSLVLVCPGLQKGQVRVEHYA-SKR------TKFIMAHD-SRIACFALTQDGQLLATSSTKGT 281 (298)
Q Consensus 212 ~~~~~~~~~~~s--~~~d~~~la~sGs~dg~v~i~~~~-~~~------~~~~~~H~-~~V~~l~fspdg~~lAt~S~Dgt 281 (298)
+......++++ .++++..+.++...++.|.+|+.. ... ...+..+. ..+..|+++++|+++++...++.
T Consensus 170 -~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~ 248 (314)
T 1pjx_A 170 -AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSH 248 (314)
T ss_dssp -EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTE
T ss_pred -CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCE
Confidence 22222344554 115555444446678889998865 222 12334444 66899999999999999888888
Q ss_pred EEEEEECCCCcEEEe
Q 022387 282 LVRIFNTLDGTLLQE 296 (298)
Q Consensus 282 ~IrIWd~~tg~~l~~ 296 (298)
|.+||..+|+.+..
T Consensus 249 -i~~~d~~~g~~~~~ 262 (314)
T 1pjx_A 249 -IEVFGPDGGQPKMR 262 (314)
T ss_dssp -EEEECTTCBSCSEE
T ss_pred -EEEEcCCCCcEeEE
Confidence 99999987776543
No 197
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.01 E-value=5.4e-08 Score=86.08 Aligned_cols=189 Identities=14% Similarity=0.101 Sum_probs=109.4
Q ss_pred eEEEEEcCCCCEEEEEcC----------------------------CeEEEEEcCCCceEEEEeeecCCceEEEEEecCC
Q 022387 88 LLHISFNQDHGCFAAGTD----------------------------HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRC 139 (298)
Q Consensus 88 V~~v~fs~dg~~lasgs~----------------------------~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (298)
+..++|+|||+.|+.++. ..+.+|++.+.+....... . .+..+.+++++
T Consensus 106 ~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~--~-~~~~~~~spdg 182 (347)
T 2gop_A 106 IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK--P-RFSSGIWHRDK 182 (347)
T ss_dssp EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE--E-TTCEEEEETTE
T ss_pred ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC--C-CcccccCCCCe
Confidence 899999999999887762 2366788877654223332 2 45566777777
Q ss_pred CEEEEEeCCCCCCCCCC-eEEEEeCCCCcEEEEeecCCceEEEEEeCCeEEEEEC---------CeEEEEEcCCCeEEEE
Q 022387 140 NILALVGGGPDPQYPLN-KVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVVLE---------QKIFVYNFADLKLLHQ 209 (298)
Q Consensus 140 ~~~~~~~~~~~~~~~d~-~v~iWD~~~~~~~~~~~~~~~v~~v~~~~~~l~v~~~---------~~I~iwd~~~~~~i~~ 209 (298)
.++++....... ... ...||.+.+++....... ..+..+.-+.+.++.... ..|.+|| +++....
T Consensus 183 -~~~~~~~~~~~~-~~~~~~~l~~~d~~~~~~l~~~-~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l 257 (347)
T 2gop_A 183 -IVVNVPHREIIP-QYFKFWDIYIWEDGKEEKMFEK-VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGI 257 (347)
T ss_dssp -EEEEEECCCSSC-CSSCCEEEEEEETTEEEEEEEE-ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEES
T ss_pred -EEEEEecccccc-cccccccEEEeCCCceEEeccC-cceeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEec
Confidence 444443221000 001 334444335443322222 344444333445665542 3677787 4443222
Q ss_pred EeccCCCcceEEEEeCCCCeEEEEecCCCceEEEEEcCCcceEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECC
Q 022387 210 IETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTL 289 (298)
Q Consensus 210 ~~~~~~~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~~~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~ 289 (298)
...+...+.. .+.++ |+ +++ +++.+|.+++| +..+....+..+...|.+++|+| .++++++.+++..+||.+.
T Consensus 258 ~~~~~~~~~~-~~~~s-dg-~~~-~~~~~~~~~l~-~~~g~~~~~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 258 LDEVDRGVGQ-AKIKD-GK-VYF-TLFEEGSVNLY-IWDGEIKPIAKGRHWIMGFDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp STTCCSEEEE-EEEET-TE-EEE-EEEETTEEEEE-EESSSEEEEECSSSEEEEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred cccCCcccCC-ccEEc-Cc-EEE-EEecCCcEEEE-EcCCceEEEecCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC
Confidence 2222222222 14445 55 555 47889999999 76555555556678899999999 6788888787723888887
Q ss_pred CCc
Q 022387 290 DGT 292 (298)
Q Consensus 290 tg~ 292 (298)
|+
T Consensus 331 -g~ 332 (347)
T 2gop_A 331 -GE 332 (347)
T ss_dssp -SS
T ss_pred -Cc
Confidence 65
No 198
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.99 E-value=3.1e-07 Score=80.08 Aligned_cols=194 Identities=8% Similarity=0.003 Sum_probs=121.3
Q ss_pred eEEEEEcCCC-CEEEEEcC-CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCC
Q 022387 88 LLHISFNQDH-GCFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ 165 (298)
Q Consensus 88 V~~v~fs~dg-~~lasgs~-~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~ 165 (298)
--+..|++++ .++.+... +.|..|+.++.... .... ...+..+.+..+++++ ++. ++.|.+||..+
T Consensus 15 ~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~--~~~~~~i~~~~dG~l~-v~~--------~~~l~~~d~~~ 82 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RVTM--DAPVSSVALRQSGGYV-ATI--------GTKFCALNWKE 82 (297)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EEEC--SSCEEEEEEBTTSSEE-EEE--------TTEEEEEETTT
T ss_pred ccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EEeC--CCceEEEEECCCCCEE-EEE--------CCeEEEEECCC
Confidence 4578899965 45556655 56889998876542 2332 5667788888888743 333 25799999988
Q ss_pred CcEEEEeec-----CCceEEEEEeCCe-EEEEE-----------CCeEEEEEcC-CCeEEEEEeccCCCcceEEEEeCCC
Q 022387 166 SRCIGELSF-----RSEVRSVKLRRDR-IIVVL-----------EQKIFVYNFA-DLKLLHQIETIANPKGLCAVSQGVG 227 (298)
Q Consensus 166 ~~~~~~~~~-----~~~v~~v~~~~~~-l~v~~-----------~~~I~iwd~~-~~~~i~~~~~~~~~~~~~~~s~~~d 227 (298)
++....... ...+..+.++++. +.++. .....+|.+. +++.. .+.........++++ +|
T Consensus 83 g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~~~~~~~~pngi~~s--pd 159 (297)
T 3g4e_A 83 QSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVK-KYFDQVDISNGLDWS--LD 159 (297)
T ss_dssp TEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEE-EEEEEESBEEEEEEC--TT
T ss_pred CcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEE-EEeeccccccceEEc--CC
Confidence 765433222 1246778887653 44443 1234566553 23332 222222222334444 45
Q ss_pred CeEEEEecCCCceEEEEEcC--Ccce------EeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 228 SLVLVCPGLQKGQVRVEHYA--SKRT------KFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 228 ~~~la~sGs~dg~v~i~~~~--~~~~------~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
+..+.++.+.++.|.++++. ...+ ..+..+...+..|+++++|++.++...++. |.+||..+|+++.++
T Consensus 160 g~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~-v~~~d~~tG~~~~~i 236 (297)
T 3g4e_A 160 HKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGR-VIRLDPVTGKRLQTV 236 (297)
T ss_dssp SCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTE-EEEECTTTCCEEEEE
T ss_pred CCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCE-EEEEcCCCceEEEEE
Confidence 55444446778889988763 3222 133345567899999999999999888888 999999999987664
No 199
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.99 E-value=1.1e-07 Score=93.20 Aligned_cols=201 Identities=10% Similarity=0.019 Sum_probs=124.1
Q ss_pred eEEEEEcCCCCEEEEEcC-Ce----------------EEEEEcCCCce--EEEEeee-cCCceEEEEEecCCCEEEEEeC
Q 022387 88 LLHISFNQDHGCFAAGTD-HG----------------FRIYNCDPFRE--IFRRDFE-RGGGIGVVEMLFRCNILALVGG 147 (298)
Q Consensus 88 V~~v~fs~dg~~lasgs~-~g----------------i~vw~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 147 (298)
+..++|+|||+.|+.++. .. +.+|++.+... ....+.. +......+.+++++..+++.+.
T Consensus 173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~ 252 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR 252 (710)
T ss_dssp SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 567999999999887765 33 77899987652 1222210 1223556788899998887763
Q ss_pred CCCCCCCCCeEEEEeCCC------Cc-EEEEeecC-CceEE-EEEeCCeEEEEEC-----CeEEEEEcCCCe--EEEEEe
Q 022387 148 GPDPQYPLNKVMIWDDHQ------SR-CIGELSFR-SEVRS-VKLRRDRIIVVLE-----QKIFVYNFADLK--LLHQIE 211 (298)
Q Consensus 148 ~~~~~~~d~~v~iWD~~~------~~-~~~~~~~~-~~v~~-v~~~~~~l~v~~~-----~~I~iwd~~~~~--~i~~~~ 211 (298)
... . .+..|.+||+.+ +. ....+..+ ..+.. +.-..+.+++.++ ..|.+||+.+.+ ..+.+.
T Consensus 253 ~~~-~-~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~ 330 (710)
T 2xdw_A 253 EGC-D-PVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLV 330 (710)
T ss_dssp CSS-S-SCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE
T ss_pred ccC-C-CccEEEEEECcccccccCCccceEEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceecc
Confidence 210 0 157899999976 42 23344332 22322 3334566666653 379999997654 234454
Q ss_pred ccCCCcceEEEEeCCCCeEEEEecCCCceEEE--EEcCC-cceEeecccccceeEEEECCCCCEEE-EEe---CCCCEEE
Q 022387 212 TIANPKGLCAVSQGVGSLVLVCPGLQKGQVRV--EHYAS-KRTKFIMAHDSRIACFALTQDGQLLA-TSS---TKGTLVR 284 (298)
Q Consensus 212 ~~~~~~~~~~~s~~~d~~~la~sGs~dg~v~i--~~~~~-~~~~~~~~H~~~V~~l~fspdg~~lA-t~S---~Dgt~Ir 284 (298)
.+.....+..+.+.+++.+++ +...+|..+| ++... +....+..|.+.|..++++|+++.|+ +.+ ..++ |.
T Consensus 331 ~~~~~~~~~~~~~~~~~~lv~-~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~-i~ 408 (710)
T 2xdw_A 331 PEHEKDVLEWVACVRSNFLVL-CYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGI-IY 408 (710)
T ss_dssp CCCSSCEEEEEEEETTTEEEE-EEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCE-EE
T ss_pred CCCCCCeEEEEEEEcCCEEEE-EEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCE-EE
Confidence 443322222333333445555 4777886555 66633 34567777888899999999997655 322 3567 99
Q ss_pred EEECCCCc
Q 022387 285 IFNTLDGT 292 (298)
Q Consensus 285 IWd~~tg~ 292 (298)
+||+.+|+
T Consensus 409 ~~d~~tg~ 416 (710)
T 2xdw_A 409 HCDLTKEE 416 (710)
T ss_dssp EEETTSSS
T ss_pred EEECCCCc
Confidence 99999877
No 200
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.96 E-value=1.1e-07 Score=80.94 Aligned_cols=192 Identities=10% Similarity=-0.026 Sum_probs=117.4
Q ss_pred CeEEEEEcCCCCEEE-EEcC-CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCC
Q 022387 87 TLLHISFNQDHGCFA-AGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (298)
Q Consensus 87 ~V~~v~fs~dg~~la-sgs~-~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~ 164 (298)
...+++++++|++++ +... +++.+|+......... ...+......+.+..+++ +.++. .++.|.+||..
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~p~~i~~~~~g~-l~v~~-------~~~~i~~~d~~ 95 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVL-PFNGLYQPQGLAVDGAGT-VYVTD-------FNNRVVTLAAG 95 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EEC-CCCSCCSCCCEEECTTCC-EEEEE-------TTTEEEEECTT
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceE-eeCCcCCcceeEECCCCC-EEEEc-------CCCEEEEEeCC
Confidence 678999999999777 4344 6688888655432211 110113345566666666 44444 24789999987
Q ss_pred CCcEEEEeec--CCceEEEEEeCC-eEEEEE--CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEecCCCc
Q 022387 165 QSRCIGELSF--RSEVRSVKLRRD-RIIVVL--EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKG 239 (298)
Q Consensus 165 ~~~~~~~~~~--~~~v~~v~~~~~-~l~v~~--~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs~dg 239 (298)
..... .+.. ...+..+.++++ .+.++. ++.|.+|+..+................+++. +++.++++ ...++
T Consensus 96 ~~~~~-~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~--~~g~l~v~-~~~~~ 171 (270)
T 1rwi_B 96 SNNQT-VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVD--NSGNVYVT-DTDNN 171 (270)
T ss_dssp CSCCE-ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEEC--TTCCEEEE-EGGGT
T ss_pred CceEe-eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEe--CCCCEEEE-ECCCC
Confidence 65432 2222 246788888865 455554 3689999765543322111111222344444 45566653 55678
Q ss_pred eEEEEEcCCcceEee-cccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCc
Q 022387 240 QVRVEHYASKRTKFI-MAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGT 292 (298)
Q Consensus 240 ~v~i~~~~~~~~~~~-~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~ 292 (298)
.|.+++......... ..+...+..|+++++|.++++...++. |++||.....
T Consensus 172 ~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~-v~~~~~~~~~ 224 (270)
T 1rwi_B 172 RVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQ-VVKLLAGSTT 224 (270)
T ss_dssp EEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSC-EEEECTTCSC
T ss_pred EEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCc-EEEEcCCCCc
Confidence 899999877654432 334467899999999999999888888 9999987654
No 201
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.96 E-value=1.1e-07 Score=93.66 Aligned_cols=203 Identities=8% Similarity=-0.006 Sum_probs=124.9
Q ss_pred CCeEEEEEcCCCCEEEEEcCC------eEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCC-------C
Q 022387 86 PTLLHISFNQDHGCFAAGTDH------GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDP-------Q 152 (298)
Q Consensus 86 ~~V~~v~fs~dg~~lasgs~~------gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 152 (298)
..+..++|||||++||.++++ .|++||+++++.+.. .. +......+.|+++ ..++++...... .
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~-~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~ 239 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-EL-KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQAL 239 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EE-EEEESCCCEESTT-SEEEEEECCCC--------C
T ss_pred EEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cC-CCceeccEEEECC-CEEEEEEecCcccccccccC
Confidence 368899999999999977642 378999998876432 21 1111245678888 888877632210 0
Q ss_pred CCCCeEEEEeCCCCcE--EEEeecC---CceEEEEEeCCe--EEEEE-C-----CeEEEEEcCCC--eEEEEEeccCCCc
Q 022387 153 YPLNKVMIWDDHQSRC--IGELSFR---SEVRSVKLRRDR--IIVVL-E-----QKIFVYNFADL--KLLHQIETIANPK 217 (298)
Q Consensus 153 ~~d~~v~iWD~~~~~~--~~~~~~~---~~v~~v~~~~~~--l~v~~-~-----~~I~iwd~~~~--~~i~~~~~~~~~~ 217 (298)
.....|++|++.+++. ...+... ..+..+.++++. +++.. + ..|++||+.++ +....+..+....
T Consensus 240 ~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~ 319 (741)
T 1yr2_A 240 NYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQ 319 (741)
T ss_dssp CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSC
T ss_pred CCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCce
Confidence 0134699999987652 2222222 137788898864 44443 2 38999999766 3145555544333
Q ss_pred ceEEEEeCCCCeEEEEecC---CCceEEEEEcCCc--ceE-eecccccceeEEEECCCCCEEEEEeCCCCEEEEEECC-C
Q 022387 218 GLCAVSQGVGSLVLVCPGL---QKGQVRVEHYASK--RTK-FIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTL-D 290 (298)
Q Consensus 218 ~~~~~s~~~d~~~la~sGs---~dg~v~i~~~~~~--~~~-~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~-t 290 (298)
.. .+++++ ..|++... .++.|.+|+.... ... .+..+...+..++|+ ++.++++...|+. .+||.+. +
T Consensus 320 ~~-~~~~dg--~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~-~~l~~~~~~ 394 (741)
T 1yr2_A 320 WD-FVDGVG--DQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAK-SQVLAFDLD 394 (741)
T ss_dssp EE-EEEEET--TEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTE-EEEEEEETT
T ss_pred EE-EEeccC--CEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCE-EEEEEEeCC
Confidence 22 234544 44433222 2556888988763 333 344555667888888 6788999999998 8888765 4
Q ss_pred CcEEEe
Q 022387 291 GTLLQE 296 (298)
Q Consensus 291 g~~l~~ 296 (298)
|+.+++
T Consensus 395 g~~~~~ 400 (741)
T 1yr2_A 395 GKPAGA 400 (741)
T ss_dssp SCEEEE
T ss_pred CCceee
Confidence 655544
No 202
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.93 E-value=3.3e-07 Score=83.32 Aligned_cols=112 Identities=9% Similarity=-0.016 Sum_probs=73.6
Q ss_pred EEEEcCCCCEEEEEc-----------CCeEEEEEcCCCceEEEEeeec------CCceEEEEEecCCCEEEEEeCCCCCC
Q 022387 90 HISFNQDHGCFAAGT-----------DHGFRIYNCDPFREIFRRDFER------GGGIGVVEMLFRCNILALVGGGPDPQ 152 (298)
Q Consensus 90 ~v~fs~dg~~lasgs-----------~~gi~vw~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (298)
.++++|||++|+++. .+.+.+||..+.+......... ......+.+++++..+.++...
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~---- 157 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS---- 157 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS----
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC----
Confidence 399999999877664 2458899999988766655410 0123457778889888877632
Q ss_pred CCCCeEEEEeCCCCcEEEEeecCCceEEEEEeCCeE-EEEECCeEEEEEcCC-CeE
Q 022387 153 YPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRI-IVVLEQKIFVYNFAD-LKL 206 (298)
Q Consensus 153 ~~d~~v~iWD~~~~~~~~~~~~~~~v~~v~~~~~~l-~v~~~~~I~iwd~~~-~~~ 206 (298)
.++.|.++|..+++.+.++...............+ .++.++++.+.++.+ ++.
T Consensus 158 -~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v 212 (386)
T 3sjl_D 158 -PAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTP 212 (386)
T ss_dssp -SSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCC
T ss_pred -CCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCCeE
Confidence 24889999999999999887654211111222333 334467777777754 443
No 203
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.92 E-value=7.5e-07 Score=80.16 Aligned_cols=72 Identities=13% Similarity=0.096 Sum_probs=56.7
Q ss_pred CeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEecCCCceEEEEEcCCc--ce-EeecccccceeEEEECCCC
Q 022387 194 QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASK--RT-KFIMAHDSRIACFALTQDG 270 (298)
Q Consensus 194 ~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~--~~-~~~~~H~~~V~~l~fspdg 270 (298)
+.|.+||+.+.+.+.++..+. ...++|++++ .+|++++ . +.|.+||..+. ++ .++..+....+.++|+|||
T Consensus 286 ~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg--~~l~v~n-~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G 359 (361)
T 2oiz_A 286 AEIWVMDTKTKQRVARIPGRD--ALSMTIDQQR--NLMLTLD-G-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVG 359 (361)
T ss_dssp SEEEEEETTTTEEEEEEECTT--CCEEEEETTT--TEEEEEC-S-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCS
T ss_pred ceEEEEECCCCcEEEEEecCC--eeEEEECCCC--CEEEEeC-C-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCC
Confidence 489999999999999999876 5666777665 5666434 4 99999998876 44 3556777889999999998
Q ss_pred C
Q 022387 271 Q 271 (298)
Q Consensus 271 ~ 271 (298)
+
T Consensus 360 ~ 360 (361)
T 2oiz_A 360 G 360 (361)
T ss_dssp C
T ss_pred C
Confidence 6
No 204
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.92 E-value=2.5e-06 Score=73.23 Aligned_cols=191 Identities=12% Similarity=0.010 Sum_probs=123.1
Q ss_pred CCeEEEEEcCCCCEEEEEcC-CeEEEEEcCCCceEEEEeee-cCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeC
Q 022387 86 PTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFE-RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (298)
Q Consensus 86 ~~V~~v~fs~dg~~lasgs~-~gi~vw~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~ 163 (298)
..+.++++.++|+++++... +++.+|+.+ .+. ...... ....+..+.+..++...+... .++.|..||.
T Consensus 15 ~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~-------~~~~i~~~~~ 85 (299)
T 2z2n_A 15 TGPYGITVSDKGKVWITQHKANMISCINLD-GKI-TEYPLPTPDAKVMCLTISSDGEVWFTEN-------AANKIGRITK 85 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-CCE-EEEECSSTTCCEEEEEECTTSCEEEEET-------TTTEEEEECT
T ss_pred CCccceEECCCCCEEEEecCCCcEEEEcCC-CCe-EEecCCcccCceeeEEECCCCCEEEeCC-------CCCeEEEECC
Confidence 47999999999998777664 678899877 433 222210 134455666666666544433 3477999998
Q ss_pred CCCcEEEEeec---CCceEEEEEeCC-eEEEEE--CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEecCC
Q 022387 164 HQSRCIGELSF---RSEVRSVKLRRD-RIIVVL--EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQ 237 (298)
Q Consensus 164 ~~~~~~~~~~~---~~~v~~v~~~~~-~l~v~~--~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs~ 237 (298)
. ++ +..+.. ...+..+.+.++ .+.++. ++.|.+||. +++.. .+...........+..++++.++++ ...
T Consensus 86 ~-g~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~-~~~ 160 (299)
T 2z2n_A 86 K-GI-IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIR-EYELPNKGSYPSFITLGSDNALWFT-ENQ 160 (299)
T ss_dssp T-SC-EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE-EEECSSTTCCEEEEEECTTSCEEEE-ETT
T ss_pred C-Cc-EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEE-EecCCCCCCCCceEEEcCCCCEEEE-eCC
Confidence 6 33 233332 236788888864 555555 368999998 44433 3322212223445556666666663 556
Q ss_pred CceEEEEEcCCcceEe--ecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcE
Q 022387 238 KGQVRVEHYASKRTKF--IMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTL 293 (298)
Q Consensus 238 dg~v~i~~~~~~~~~~--~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~ 293 (298)
++.|..++. ...... +..+...+..|+++++|+++++...++. |.+||. +++.
T Consensus 161 ~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~-i~~~~~-~g~~ 215 (299)
T 2z2n_A 161 NNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNK-IGRITT-SGEI 215 (299)
T ss_dssp TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTE-EEEECT-TCCE
T ss_pred CCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCce-EEEECC-CCcE
Confidence 778888887 444433 3344567899999999999888877888 999998 7764
No 205
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.87 E-value=2.3e-07 Score=90.72 Aligned_cols=200 Identities=9% Similarity=0.078 Sum_probs=122.8
Q ss_pred CCCCCeEEEEEcCCCCEEEEE-----cC-CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCC-----
Q 022387 83 SPPPTLLHISFNQDHGCFAAG-----TD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDP----- 151 (298)
Q Consensus 83 ~~~~~V~~v~fs~dg~~lasg-----s~-~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 151 (298)
.+...+..++|||||++||-+ ++ ..|+|||+++++.+.. .+ +......+.|+ ++..++.+...+..
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~-~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~ 202 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PL-KDVKFSGISWL-GNEGFFYSSYDKPDGSELS 202 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EE-EEEESCCCEEE-TTTEEEEEESSCCC-----
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-cc-CCceeccEEEe-CCCEEEEEEecCccccccc
Confidence 344578899999999999943 33 2378999999875332 22 01112456788 88888887743210
Q ss_pred -CCCCCeEEEEeCCCCcE----EEEeec--CCceEEEEEeCCe--EEEEE-C----CeEEEEEcCCCe-EEEEEeccCCC
Q 022387 152 -QYPLNKVMIWDDHQSRC----IGELSF--RSEVRSVKLRRDR--IIVVL-E----QKIFVYNFADLK-LLHQIETIANP 216 (298)
Q Consensus 152 -~~~d~~v~iWD~~~~~~----~~~~~~--~~~v~~v~~~~~~--l~v~~-~----~~I~iwd~~~~~-~i~~~~~~~~~ 216 (298)
......|++|++.+.+. +.+... ...+..+.++++. +++.. . +.|+++|+.+.+ .+..+..+...
T Consensus 203 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~ 282 (693)
T 3iuj_A 203 ARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDA 282 (693)
T ss_dssp --CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSS
T ss_pred ccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCc
Confidence 01235699999987652 222222 2236678888753 43332 1 489999996653 34555554443
Q ss_pred cceEEEEeCCCCeEEEEecCC---CceEEEEEcCCcce---EeecccccceeEEEECCCCCEEEEEeCCC---CEEEEEE
Q 022387 217 KGLCAVSQGVGSLVLVCPGLQ---KGQVRVEHYASKRT---KFIMAHDSRIACFALTQDGQLLATSSTKG---TLVRIFN 287 (298)
Q Consensus 217 ~~~~~~s~~~d~~~la~sGs~---dg~v~i~~~~~~~~---~~~~~H~~~V~~l~fspdg~~lAt~S~Dg---t~IrIWd 287 (298)
.... ++++++ .+++. ... ++.|..+++..... ..+..|...+. .|++++++|+....++ . |++||
T Consensus 283 ~~~~-~~~~g~-~l~~~-t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~-l~~~d 356 (693)
T 3iuj_A 283 DVSL-VDNKGS-TLYLL-TNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATAR-VEQFD 356 (693)
T ss_dssp CEEE-EEEETT-EEEEE-ECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEE-EEEEC
T ss_pred eEEE-EeccCC-EEEEE-ECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeE-EEEEE
Confidence 3222 555543 33333 333 46788888876443 46666766665 8999998887776554 5 88999
Q ss_pred CCCC
Q 022387 288 TLDG 291 (298)
Q Consensus 288 ~~tg 291 (298)
+..+
T Consensus 357 ~~g~ 360 (693)
T 3iuj_A 357 YEGK 360 (693)
T ss_dssp TTSC
T ss_pred CCCC
Confidence 8754
No 206
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.87 E-value=2.7e-06 Score=73.37 Aligned_cols=192 Identities=9% Similarity=-0.040 Sum_probs=130.3
Q ss_pred CeEEEEEcCCCCEEEEEc---CCeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeC
Q 022387 87 TLLHISFNQDHGCFAAGT---DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (298)
Q Consensus 87 ~V~~v~fs~dg~~lasgs---~~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~ 163 (298)
....+.|++||.++++.+ .+.++++|..+++.+....+ ........+...++.+..+.. .++.+.++|.
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l--~~~~fgeGi~~~g~~lyv~t~------~~~~v~viD~ 93 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKM--DDSYFGEGLTLLNEKLYQVVW------LKNIGFIYDR 93 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEEC--CTTCCEEEEEEETTEEEEEET------TCSEEEEEET
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEec--CCCcceEEEEEeCCEEEEEEe------cCCEEEEEEC
Confidence 468999999986555544 25688999999988766654 222121222333556666663 4689999999
Q ss_pred CCCcEEEEeecC-CceEEEEEeCCeEEEEE-CCeEEEEEcCCCeEEEEEeccCC--Cc---ceEEEEeCCCCeEEEEecC
Q 022387 164 HQSRCIGELSFR-SEVRSVKLRRDRIIVVL-EQKIFVYNFADLKLLHQIETIAN--PK---GLCAVSQGVGSLVLVCPGL 236 (298)
Q Consensus 164 ~~~~~~~~~~~~-~~v~~v~~~~~~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~--~~---~~~~~s~~~d~~~la~sGs 236 (298)
.+.+.+.++... ..-..++...+.++++. +++|.++|..+.+.+.++..... ++ ..+.+. ++.+++. ..
T Consensus 94 ~t~~v~~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~---dg~lyvn-~~ 169 (266)
T 2iwa_A 94 RTLSNIKNFTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI---NGEVWAN-IW 169 (266)
T ss_dssp TTTEEEEEEECCSSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE---TTEEEEE-ET
T ss_pred CCCcEEEEEECCCCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE---CCEEEEe-cC
Confidence 999999998876 55566777777777764 47999999999999999886432 21 122333 3466653 45
Q ss_pred CCceEEEEEcCCcceE-eeccc-------------ccceeEEEECCCC-CEEEEEeCCCCEEEEEECCCC
Q 022387 237 QKGQVRVEHYASKRTK-FIMAH-------------DSRIACFALTQDG-QLLATSSTKGTLVRIFNTLDG 291 (298)
Q Consensus 237 ~dg~v~i~~~~~~~~~-~~~~H-------------~~~V~~l~fspdg-~~lAt~S~Dgt~IrIWd~~tg 291 (298)
.++.|.+-|..+.++. .+.-. ....+.|+|+|++ ++|+|+...++ +.+.++...
T Consensus 170 ~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~-v~~i~l~~~ 238 (266)
T 2iwa_A 170 QTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPK-LFEIKLHLV 238 (266)
T ss_dssp TSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSE-EEEEEEEEC
T ss_pred CCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCe-EEEEEEecc
Confidence 5678888887766543 33211 1356999999997 57777767777 888877643
No 207
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.83 E-value=4.4e-07 Score=83.66 Aligned_cols=201 Identities=17% Similarity=0.106 Sum_probs=119.6
Q ss_pred EEEEcCCCCEEEEEc-----------CCeEEEEEcCCCceEEEEeee------cCCceEEEEEecCCCEEEEEeCCCCCC
Q 022387 90 HISFNQDHGCFAAGT-----------DHGFRIYNCDPFREIFRRDFE------RGGGIGVVEMLFRCNILALVGGGPDPQ 152 (298)
Q Consensus 90 ~v~fs~dg~~lasgs-----------~~gi~vw~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (298)
.++++|||++|+++. .+.+.++|..+.+......+. .......+.+++++..++++...
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~---- 197 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS---- 197 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS----
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC----
Confidence 799999999877764 245779999998876655541 01123345678888888877632
Q ss_pred CCCCeEEEEeCCCCcEEEEeecCCceEE--------EEEeCC--------------------------------------
Q 022387 153 YPLNKVMIWDDHQSRCIGELSFRSEVRS--------VKLRRD-------------------------------------- 186 (298)
Q Consensus 153 ~~d~~v~iWD~~~~~~~~~~~~~~~v~~--------v~~~~~-------------------------------------- 186 (298)
.++.|.+.|..+++.+.++.....+.- +.+.++
T Consensus 198 -~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg 276 (426)
T 3c75_H 198 -PAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRS 276 (426)
T ss_dssp -SSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTT
T ss_pred -CCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCC
Confidence 247899999999988887765321100 111111
Q ss_pred -eEEEEE-CCeEEEEEcCCCeE--EEEEecc----------CCCcceEEEEeCCCCeEEEEecC-------CCceEEEEE
Q 022387 187 -RIIVVL-EQKIFVYNFADLKL--LHQIETI----------ANPKGLCAVSQGVGSLVLVCPGL-------QKGQVRVEH 245 (298)
Q Consensus 187 -~l~v~~-~~~I~iwd~~~~~~--i~~~~~~----------~~~~~~~~~s~~~d~~~la~sGs-------~dg~v~i~~ 245 (298)
.+++.. .+.|.+.|+...+. +.++... ......++++++++..+++.... ..+.|.+.|
T Consensus 277 ~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID 356 (426)
T 3c75_H 277 GRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLN 356 (426)
T ss_dssp CEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEE
T ss_pred CEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEE
Confidence 111111 23444445432221 1111100 00111256666654334432110 135788888
Q ss_pred cCCcceE-eecccccceeEEEECCCCC-EEEEEe-CCCCEEEEEECCCCcEEEec
Q 022387 246 YASKRTK-FIMAHDSRIACFALTQDGQ-LLATSS-TKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 246 ~~~~~~~-~~~~H~~~V~~l~fspdg~-~lAt~S-~Dgt~IrIWd~~tg~~l~~~ 297 (298)
..+.++. ++.. ......|+|+|||+ +|.++. .+++ |.|+|+.+++.++++
T Consensus 357 ~~T~kvv~~I~v-g~~P~gia~spDg~~~lyv~n~~s~~-VsVID~~t~kvv~tI 409 (426)
T 3c75_H 357 AETGERINKIEL-GHEIDSINVSQDAEPLLYALSAGTQT-LHIYDAATGEELRSV 409 (426)
T ss_dssp TTTCCEEEEEEE-EEEECEEEECCSSSCEEEEEETTTTE-EEEEETTTCCEEEEE
T ss_pred CCCCeEEEEEEC-CCCcCeEEEccCCCEEEEEEcCCCCe-EEEEECCCCCEEEEe
Confidence 8776543 4432 22599999999998 888887 4888 999999999998774
No 208
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.83 E-value=7.8e-06 Score=70.04 Aligned_cols=191 Identities=9% Similarity=-0.014 Sum_probs=120.4
Q ss_pred CCeEEEEEcCCCCEEEEEcC-CeEEEEEcCCCceEEEEeee-cCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeC
Q 022387 86 PTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFE-RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (298)
Q Consensus 86 ~~V~~v~fs~dg~~lasgs~-~gi~vw~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~ 163 (298)
..+.++++.++|.++++... +++..|+.+ .+ ....... .......+.+..++.+.+... .++.|.+||.
T Consensus 57 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-------~~~~i~~~d~ 127 (299)
T 2z2n_A 57 AKVMCLTISSDGEVWFTENAANKIGRITKK-GI-IKEYTLPNPDSAPYGITEGPNGDIWFTEM-------NGNRIGRITD 127 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-SC-EEEEECSSTTCCEEEEEECTTSCEEEEET-------TTTEEEEECT
T ss_pred CceeeEEECCCCCEEEeCCCCCeEEEECCC-Cc-EEEEeCCCcCCCceeeEECCCCCEEEEec-------CCceEEEECC
Confidence 47899999999998887764 568888865 22 2222211 123455555655555444433 2478999998
Q ss_pred CCCcEEEE-ee-cCCceEEEEEeCC-eEEEEE--CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEecCCC
Q 022387 164 HQSRCIGE-LS-FRSEVRSVKLRRD-RIIVVL--EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQK 238 (298)
Q Consensus 164 ~~~~~~~~-~~-~~~~v~~v~~~~~-~l~v~~--~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs~d 238 (298)
+++.... .. ....+..+.+.++ .+.++. .+.|..||. +++.. .+...........+..++++.++++ ...+
T Consensus 128 -~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~-~~~~ 203 (299)
T 2z2n_A 128 -DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDIT-EFKIPTPASGPVGITKGNDDALWFV-EIIG 203 (299)
T ss_dssp -TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE-EEECSSTTCCEEEEEECTTSSEEEE-ETTT
T ss_pred -CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEE-EeeCCCCCCcceeEEECCCCCEEEE-ccCC
Confidence 5543322 11 1235778888865 455554 368999998 55543 2322212223345555666666663 4557
Q ss_pred ceEEEEEcCCcceEe--ecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCc
Q 022387 239 GQVRVEHYASKRTKF--IMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGT 292 (298)
Q Consensus 239 g~v~i~~~~~~~~~~--~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~ 292 (298)
+.|.+++. ...... +..+...+.+|+++++|+++++...++. |.+||. +++
T Consensus 204 ~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~-i~~~d~-~g~ 256 (299)
T 2z2n_A 204 NKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANK-IGRLTS-NNI 256 (299)
T ss_dssp TEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTE-EEEEET-TTE
T ss_pred ceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCce-EEEECC-CCc
Confidence 78888888 444332 3445677999999999998888877888 999998 454
No 209
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.82 E-value=3.2e-06 Score=74.82 Aligned_cols=192 Identities=7% Similarity=-0.002 Sum_probs=118.0
Q ss_pred CeEEEEEcCCCC-EEEEEcC-CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCC
Q 022387 87 TLLHISFNQDHG-CFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (298)
Q Consensus 87 ~V~~v~fs~dg~-~lasgs~-~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~ 164 (298)
-..+.+|++++. ++.++.. +++.+|+.++.+.. .... ...+..+.+..+++.++... ..|.+||..
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~--~~~v~~i~~~~dg~l~v~~~---------~gl~~~d~~ 117 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHAL--PFMGSALAKISDSKQLIASD---------DGLFLRDTA 117 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEEC--SSCEEEEEEEETTEEEEEET---------TEEEEEETT
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEEC--CCcceEEEEeCCCeEEEEEC---------CCEEEEECC
Confidence 356789999854 5566655 66888988776432 2232 45677777777776554432 349999998
Q ss_pred CCcEEEEeecC-----CceEEEEEeCCe-EEEEEC--------CeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeE
Q 022387 165 QSRCIGELSFR-----SEVRSVKLRRDR-IIVVLE--------QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLV 230 (298)
Q Consensus 165 ~~~~~~~~~~~-----~~v~~v~~~~~~-l~v~~~--------~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~ 230 (298)
+++........ ..+..+.++++. +.++.. +.|..++ +++. ..+........ .+.+++|+..
T Consensus 118 ~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~-~~~~~~~~~~~--~i~~s~dg~~ 192 (326)
T 2ghs_A 118 TGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKV-TKLFADISIPN--SICFSPDGTT 192 (326)
T ss_dssp TCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEE-EEEEEEESSEE--EEEECTTSCE
T ss_pred CCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcE-EEeeCCCcccC--CeEEcCCCCE
Confidence 87754332221 246778888753 444432 3455555 4443 33322212222 3444555555
Q ss_pred EEEecCCCceEEEEEcC--Cc-ce------EeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 231 LVCPGLQKGQVRVEHYA--SK-RT------KFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 231 la~sGs~dg~v~i~~~~--~~-~~------~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
+.++.+.++.|.+++.. .. .+ ..+..+...+..++++++|.++++...++. |.+||. +|+.+.++
T Consensus 193 lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~-v~~~d~-~g~~~~~i 266 (326)
T 2ghs_A 193 GYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGA-VDRYDT-DGNHIARY 266 (326)
T ss_dssp EEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTE-EEEECT-TCCEEEEE
T ss_pred EEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCE-EEEECC-CCCEEEEE
Confidence 54446777899998874 33 21 123334556889999999999888877788 999998 67776553
No 210
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.80 E-value=6.9e-09 Score=94.00 Aligned_cols=182 Identities=10% Similarity=-0.010 Sum_probs=93.4
Q ss_pred CCCEEEEEcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCCcEEEEeec
Q 022387 96 DHGCFAAGTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSF 174 (298)
Q Consensus 96 dg~~lasgs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~~~~~~~~ 174 (298)
++..|++|+.++ +..||..+++.++.... +.+....+..++..++..+ .|+.|+.||..+++.+..+.+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~---~~~~s~p~~~~g~~~v~~s-------~dg~l~a~d~~tG~~~w~~~~ 77 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE---DPVLQVPTHVEEPAFLPDP-------NDGSLYTLGSKNNEGLTKLPF 77 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC---CCSCCCC-----CCEEECT-------TTCCEEEC-----CCSEECSC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC---CCceecceEcCCCEEEEeC-------CCCEEEEEECCCCceeeeeec
Confidence 567788887754 78999999988777663 2222222222333333322 578999999999887666554
Q ss_pred CC--ceE-EEEE-eCCeEEEE-ECCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEecCCCceEEEEEcCCc
Q 022387 175 RS--EVR-SVKL-RRDRIIVV-LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASK 249 (298)
Q Consensus 175 ~~--~v~-~v~~-~~~~l~v~-~~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~ 249 (298)
.. .+. +..+ ..+.++++ .++.|+.||..+++.+.++..+.. ..+++ ++..+++ |+.+|.|..||..+.
T Consensus 78 ~~~~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~----~~~~p--~~~~v~~-~~~dg~v~a~d~~tG 150 (369)
T 2hz6_A 78 TIPELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA----DSLSP--STSLLYL-GRTEYTITMYDTKTR 150 (369)
T ss_dssp CHHHHHTTCSCC-----CCCCEEEEEEEEECCC----------------------------EEE-EEEEEEEECCCSSSS
T ss_pred cCccccccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc----ccccc--cCCEEEE-EecCCEEEEEECCCC
Confidence 31 110 0011 23334433 357899999999999888775431 23333 3345543 788999999998765
Q ss_pred ce-EeecccccceeEEEECCCC---CEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 250 RT-KFIMAHDSRIACFALTQDG---QLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 250 ~~-~~~~~H~~~V~~l~fspdg---~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
.. ..+..+. ....+++.++ ..+..++.||. |+.||.++|+++.++
T Consensus 151 ~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~-v~a~d~~tG~~~W~~ 199 (369)
T 2hz6_A 151 ELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGL-VVTVDSESGDVLWIQ 199 (369)
T ss_dssp SCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCE-EEEECTTTCCEEEEE
T ss_pred CEEEeEeccc--ccCccccCCccccceEEEECCCCE-EEEEECCCCcEEEEe
Confidence 53 3433221 2334444442 45667788998 999999999998764
No 211
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.71 E-value=4.2e-05 Score=65.38 Aligned_cols=192 Identities=8% Similarity=-0.001 Sum_probs=120.4
Q ss_pred CCeEEEEEcCCCCEEEEEcC-CeEEEEEcCCCceEEEEeee-cCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeC
Q 022387 86 PTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFE-RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (298)
Q Consensus 86 ~~V~~v~fs~dg~~lasgs~-~gi~vw~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~ 163 (298)
..+.++++.++|+++++... +++.+|+.+ .+. ...... .......+.+..+++..+... .++.|..+|.
T Consensus 62 ~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~-------~~~~i~~~~~ 132 (300)
T 2qc5_A 62 AKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF-TEYPLPQPDSGPYGITEGLNGDIWFTQL-------NGDRIGKLTA 132 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECSTTCEEEEET-------TTTEEEEECT
T ss_pred CcceeEEECCCCCEEEEecCCCeEEEECCC-CCe-EEecCCCCCCCCccceECCCCCEEEEcc-------CCCeEEEECC
Confidence 46889999999998777664 567788876 333 222221 123455566665565444332 2477999998
Q ss_pred CCCcEEEEeec---CCceEEEEEeCC-eEEEEE--CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEecCC
Q 022387 164 HQSRCIGELSF---RSEVRSVKLRRD-RIIVVL--EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQ 237 (298)
Q Consensus 164 ~~~~~~~~~~~---~~~v~~v~~~~~-~l~v~~--~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs~ 237 (298)
. ++.. .+.. ...+..+.+.++ .+.++. .+.|..||. +++.. .+...........+..++++.++++ ...
T Consensus 133 ~-g~~~-~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~~~~~~~~~i~~d~~g~l~v~-~~~ 207 (300)
T 2qc5_A 133 D-GTIY-EYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLE-EYPLPTNAAAPVGITSGNDGALWFV-EIM 207 (300)
T ss_dssp T-SCEE-EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE-EEECSSTTCCEEEEEECTTSSEEEE-ETT
T ss_pred C-CCEE-EccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEE-EeeCCCCCCCcceEEECCCCCEEEE-ccC
Confidence 7 5443 2222 245778888764 466665 468999998 45443 3332222223445555666666663 455
Q ss_pred CceEEEEEcCCcceE-eecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcE
Q 022387 238 KGQVRVEHYASKRTK-FIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTL 293 (298)
Q Consensus 238 dg~v~i~~~~~~~~~-~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~ 293 (298)
.+.|.+++....... .+..+...+.+|+++++|+++++...++. |.+||. +++.
T Consensus 208 ~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~-i~~~~~-~g~~ 262 (300)
T 2qc5_A 208 GNKIGRITTTGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQ-IGRITN-DNTI 262 (300)
T ss_dssp TTEEEEECTTCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTE-EEEECT-TSCE
T ss_pred CCEEEEEcCCCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCe-EEEECC-CCcE
Confidence 677888887433222 23345567999999999998888877788 999997 4543
No 212
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.70 E-value=5.2e-05 Score=64.80 Aligned_cols=191 Identities=9% Similarity=0.008 Sum_probs=120.8
Q ss_pred CCeEEEEEcCCCCEEEEEcC-CeEEEEEcCCCceEEEEeee-cCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeC
Q 022387 86 PTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFE-RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (298)
Q Consensus 86 ~~V~~v~fs~dg~~lasgs~-~gi~vw~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~ 163 (298)
..+.++++.++|+++++... +++.+|+.+ .+.. ..... ....+..+.+..+++..+... .++.|..+|.
T Consensus 20 ~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~-------~~~~v~~~d~ 90 (300)
T 2qc5_A 20 SGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIK-EFEVPTPDAKVMCLIVSSLGDIWFTEN-------GANKIGKLSK 90 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECTTSCEEEEET-------TTTEEEEECT
T ss_pred CCcceeeECCCCCEEEEcCCCCeEEEECCC-CceE-EEECCCCCCcceeEEECCCCCEEEEec-------CCCeEEEECC
Confidence 47889999999998777754 678899877 3332 22221 123455566665565444332 3477999998
Q ss_pred CCCcEEEEeec---CCceEEEEEeCC-eEEEEE--CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEecCC
Q 022387 164 HQSRCIGELSF---RSEVRSVKLRRD-RIIVVL--EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQ 237 (298)
Q Consensus 164 ~~~~~~~~~~~---~~~v~~v~~~~~-~l~v~~--~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs~ 237 (298)
. ++. ..+.. ...+..+.+.++ .+.++. ++.|..||.. ++.. .+...........+..++++.++++ ...
T Consensus 91 ~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~-~~~~~~~~~~~~~i~~d~~g~l~v~-~~~ 165 (300)
T 2qc5_A 91 K-GGF-TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY-EYDLPNKGSYPAFITLGSDNALWFT-ENQ 165 (300)
T ss_dssp T-SCE-EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECTTSSEEEE-ETT
T ss_pred C-CCe-EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE-EccCCCCCCCceeEEECCCCCEEEE-ecC
Confidence 7 554 23332 245778888754 455555 4689999886 4443 3322211223445555666666653 555
Q ss_pred CceEEEEEcCCcceEe--ecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcE
Q 022387 238 KGQVRVEHYASKRTKF--IMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTL 293 (298)
Q Consensus 238 dg~v~i~~~~~~~~~~--~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~ 293 (298)
++.|..++.+. .... +..+...+..|+++++|.++++....+. |.+||. +++.
T Consensus 166 ~~~i~~~~~~g-~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~-i~~~~~-~g~~ 220 (300)
T 2qc5_A 166 NNSIGRITNTG-KLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNK-IGRITT-TGEI 220 (300)
T ss_dssp TTEEEEECTTC-CEEEEECSSTTCCEEEEEECTTSSEEEEETTTTE-EEEECT-TCCE
T ss_pred CCeEEEECCCC-cEEEeeCCCCCCCcceEEECCCCCEEEEccCCCE-EEEEcC-CCcE
Confidence 77888888743 3332 2344567999999999998888877777 999998 5554
No 213
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.68 E-value=4e-06 Score=74.63 Aligned_cols=204 Identities=7% Similarity=0.041 Sum_probs=119.2
Q ss_pred CCeEEEEEcCCCCEEEEEcC--Ce-EEEEEcCCCceEEEEe-----e-ecCCceEEEEEecCCCEEEEEeCCCCCCCCCC
Q 022387 86 PTLLHISFNQDHGCFAAGTD--HG-FRIYNCDPFREIFRRD-----F-ERGGGIGVVEMLFRCNILALVGGGPDPQYPLN 156 (298)
Q Consensus 86 ~~V~~v~fs~dg~~lasgs~--~g-i~vw~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 156 (298)
..+..|++++||+++++... ++ ++||.++.. .+.... . .+...+..+.+..++++.++-.+.. ...++
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g-~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~--~~~~~ 93 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQD-GLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQ--SKSVP 93 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETT-EEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHH--HTSCC
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCC-CeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCC--cCCCC
Confidence 57899999999999888642 23 567776633 222110 0 0123455556655555433322100 00136
Q ss_pred eEEEEeCCCCcEEEEeecCC-------ceEEEEEeC--CeEEEEE-----CCeEEEEEcCCCeEEEEEeccCC--C----
Q 022387 157 KVMIWDDHQSRCIGELSFRS-------EVRSVKLRR--DRIIVVL-----EQKIFVYNFADLKLLHQIETIAN--P---- 216 (298)
Q Consensus 157 ~v~iWD~~~~~~~~~~~~~~-------~v~~v~~~~--~~l~v~~-----~~~I~iwd~~~~~~i~~~~~~~~--~---- 216 (298)
+|.+||..+++.+..+.+.. .+..+.+++ ..+.++. ++.|.+||+.+++..+.+..|.. +
T Consensus 94 ~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~ 173 (343)
T 2qe8_A 94 KLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDID 173 (343)
T ss_dssp EEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCC
T ss_pred eEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccc
Confidence 89999999998777776532 346788874 3455552 36999999988776665533210 0
Q ss_pred ---------------------cceEEEEeCCCCeEEEEecCCCceEEEEEcC---Ccc-----e---EeecccccceeEE
Q 022387 217 ---------------------KGLCAVSQGVGSLVLVCPGLQKGQVRVEHYA---SKR-----T---KFIMAHDSRIACF 264 (298)
Q Consensus 217 ---------------------~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~---~~~-----~---~~~~~H~~~V~~l 264 (298)
.....+..++|+..|.++......+...+.. ... + ....++......|
T Consensus 174 ~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgi 253 (343)
T 2qe8_A 174 LVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGI 253 (343)
T ss_dssp CEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCE
T ss_pred eeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceE
Confidence 1122344444555444322333344333321 100 0 0122455567889
Q ss_pred EECCCCCEEEEEeCCCCEEEEEECCCCcE
Q 022387 265 ALTQDGQLLATSSTKGTLVRIFNTLDGTL 293 (298)
Q Consensus 265 ~fspdg~~lAt~S~Dgt~IrIWd~~tg~~ 293 (298)
+++++|.++++...++. |.+||.++|+.
T Consensus 254 a~d~~G~l~va~~~~~~-V~~~d~~~G~~ 281 (343)
T 2qe8_A 254 SIDKDHNIYVGDLAHSA-IGVITSADRAY 281 (343)
T ss_dssp EECTTCCEEEEEGGGTE-EEEEETTTTEE
T ss_pred EECCCCCEEEEccCCCe-EEEEECCCCCE
Confidence 99999999999998998 99999866754
No 214
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.65 E-value=1.5e-05 Score=68.17 Aligned_cols=181 Identities=7% Similarity=0.003 Sum_probs=120.1
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCC---eEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEE
Q 022387 84 PPPTLLHISFNQDHGCFAAGTDH---GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (298)
Q Consensus 84 ~~~~V~~v~fs~dg~~lasgs~~---gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i 160 (298)
...-...+.|+ ++.++.+.+.. .++++|.++++.+....+ ........+...++.+..+.. .++.+.+
T Consensus 41 ~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l--~~~~FgeGit~~g~~ly~ltw------~~~~v~v 111 (262)
T 3nol_A 41 TKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIEL--GKRYFGEGISDWKDKIVGLTW------KNGLGFV 111 (262)
T ss_dssp TTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEEC--CTTCCEEEEEEETTEEEEEES------SSSEEEE
T ss_pred CCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEec--CCccceeEEEEeCCEEEEEEe------eCCEEEE
Confidence 33456889999 67655555543 488999999988777765 333322222334556666653 5689999
Q ss_pred EeCCCCcEEEEeecCCceEEEEEeCCeEEEEE-CCeEEEEEcCCCeEEEEEeccC--CCcc---eEEEEeCCCCeEEEEe
Q 022387 161 WDDHQSRCIGELSFRSEVRSVKLRRDRIIVVL-EQKIFVYNFADLKLLHQIETIA--NPKG---LCAVSQGVGSLVLVCP 234 (298)
Q Consensus 161 WD~~~~~~~~~~~~~~~v~~v~~~~~~l~v~~-~~~I~iwd~~~~~~i~~~~~~~--~~~~---~~~~s~~~d~~~la~s 234 (298)
+|..+.+.+.++.+...-..++...+.+++.. +++|.++|..+.+.+.++.... .++. .+.+. ++.+.|.
T Consensus 112 ~D~~t~~~~~ti~~~~eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~---~G~lyan- 187 (262)
T 3nol_A 112 WNIRNLRQVRSFNYDGEGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV---DGEIFAN- 187 (262)
T ss_dssp EETTTCCEEEEEECSSCCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE---TTEEEEE-
T ss_pred EECccCcEEEEEECCCCceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE---CCEEEEE-
Confidence 99999999999998776677777777777664 4789999999999999987643 2221 12332 3466653
Q ss_pred cCCCceEEEEEcCCcceE-eecc----------c--ccceeEEEECCCCCEEEEEe
Q 022387 235 GLQKGQVRVEHYASKRTK-FIMA----------H--DSRIACFALTQDGQLLATSS 277 (298)
Q Consensus 235 Gs~dg~v~i~~~~~~~~~-~~~~----------H--~~~V~~l~fspdg~~lAt~S 277 (298)
.-.+..|.+-|..+.++. .+.. + ....+.|||+|+++.|...+
T Consensus 188 ~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 188 VWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp ETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred EccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 445667777777666543 2221 1 13579999999865544444
No 215
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.63 E-value=1.8e-06 Score=78.10 Aligned_cols=196 Identities=10% Similarity=0.033 Sum_probs=113.8
Q ss_pred EEEEcCCCCEEEEEc-----------CCeEEEEEcCCCceEEEEeeec-------CCceEEEEEecCCCEEEEEeCCCCC
Q 022387 90 HISFNQDHGCFAAGT-----------DHGFRIYNCDPFREIFRRDFER-------GGGIGVVEMLFRCNILALVGGGPDP 151 (298)
Q Consensus 90 ~v~fs~dg~~lasgs-----------~~gi~vw~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (298)
.+.|+|||++++++. ++.+.+||..+.+...+... . ......+.+++++..++++..+
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v-~~~~~~~~g~~P~~ia~SpDGk~lyVan~~--- 144 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIEL-PDAPRFSVGPRVHIIGNCASSACLLFFLFG--- 144 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEE-TTSCSCCBSCCTTSEEECTTSSCEEEEECS---
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEEC-CCccccccCCCcceEEEcCCCCEEEEEccC---
Confidence 799999999888775 24478999999988766654 1 0234467778888888877632
Q ss_pred CCCCCeEEE--EeCCCCcEEEEeecCC-------------------ceEEEEEeC-------------------------
Q 022387 152 QYPLNKVMI--WDDHQSRCIGELSFRS-------------------EVRSVKLRR------------------------- 185 (298)
Q Consensus 152 ~~~d~~v~i--WD~~~~~~~~~~~~~~-------------------~v~~v~~~~------------------------- 185 (298)
..+.|.+ +|..+ +.++.... .+..+....
T Consensus 145 --~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~ 219 (368)
T 1mda_H 145 --SSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQA 219 (368)
T ss_dssp --SSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEE
T ss_pred --CCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcccc
Confidence 1356888 88866 23332211 111111111
Q ss_pred ---CeEEEEECCeEEEEEcCCC--eEEEEEecc----------CCCcceEEEEeCCCCeEEEEec-C-C-----CceEEE
Q 022387 186 ---DRIIVVLEQKIFVYNFADL--KLLHQIETI----------ANPKGLCAVSQGVGSLVLVCPG-L-Q-----KGQVRV 243 (298)
Q Consensus 186 ---~~l~v~~~~~I~iwd~~~~--~~i~~~~~~----------~~~~~~~~~s~~~d~~~la~sG-s-~-----dg~v~i 243 (298)
..++....+.|.+.|+... +.+.++... ......++++++++..+++. . . . ++.+.+
T Consensus 220 ~~~~~~~~vs~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~-~~~~~~~~~~~~~~~V 298 (368)
T 1mda_H 220 NYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILT-VEHSRSCLAAAENTSS 298 (368)
T ss_dssp TTTTEEEECBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEE-EECSSCTTSCEEEEEE
T ss_pred ccCCEEEEEcCCEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEe-ccccCcccccCCCEEE
Confidence 0111111144555565322 222222110 00111256777664334332 2 1 2 234558
Q ss_pred EEcCCcce-EeecccccceeEEEECCCCC-EEEEEe-CCCCEEEEEECCCCcEEEec
Q 022387 244 EHYASKRT-KFIMAHDSRIACFALTQDGQ-LLATSS-TKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 244 ~~~~~~~~-~~~~~H~~~V~~l~fspdg~-~lAt~S-~Dgt~IrIWd~~tg~~l~~~ 297 (298)
+|..+.+. ..+.... ....|+|+|||+ ++++.. .+++ |.|+|+.+++.++++
T Consensus 299 iD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~-VsVID~~t~kvv~~I 353 (368)
T 1mda_H 299 VTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEV-LDIYDAASDQDQSSV 353 (368)
T ss_dssp EESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTE-EEEEESSSCEEEEEC
T ss_pred EECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCe-EEEEECCCCcEEEEE
Confidence 88876654 3444332 699999999997 677777 5898 999999999998875
No 216
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.61 E-value=3.3e-06 Score=83.10 Aligned_cols=197 Identities=8% Similarity=-0.027 Sum_probs=118.2
Q ss_pred EEEEEcCCCCEEEEEcC-Ce--------------EEEEEcCCCce--EEEEeeecCC--ceEEEEEecCCCEEEEEeCCC
Q 022387 89 LHISFNQDHGCFAAGTD-HG--------------FRIYNCDPFRE--IFRRDFERGG--GIGVVEMLFRCNILALVGGGP 149 (298)
Q Consensus 89 ~~v~fs~dg~~lasgs~-~g--------------i~vw~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 149 (298)
..++|+|| +.|+.++. +. +.+|++.+... ...... ..+ .+..+.+++++..+++.+...
T Consensus 212 ~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~-~~~~~~~~~~~~SpDG~~l~~~~~~~ 289 (741)
T 1yr2_A 212 SGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFAT-PELPKRGHGASVSSDGRWVVITSSEG 289 (741)
T ss_dssp CCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECC-TTCTTCEEEEEECTTSCEEEEEEECT
T ss_pred ccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEecc-CCCCeEEEEEEECCCCCEEEEEEEcc
Confidence 46889999 98887764 22 66888876542 222221 122 356677888888888776321
Q ss_pred CCCCCCCeEEEEeCCCC--cEEEEeecC-CceEE-EEEeCCeEEEEEC-----CeEEEEEcCCC-eEEEEEeccCCCcce
Q 022387 150 DPQYPLNKVMIWDDHQS--RCIGELSFR-SEVRS-VKLRRDRIIVVLE-----QKIFVYNFADL-KLLHQIETIANPKGL 219 (298)
Q Consensus 150 ~~~~~d~~v~iWD~~~~--~~~~~~~~~-~~v~~-v~~~~~~l~v~~~-----~~I~iwd~~~~-~~i~~~~~~~~~~~~ 219 (298)
.. ....|.+||+.++ ++...+... ..+.. +.-..+.+++.++ ..|.+||+.+. .....+..+... ..
T Consensus 290 ~~--~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~-~l 366 (741)
T 1yr2_A 290 TD--PVNTVHVARVTNGKIGPVTALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKD-NL 366 (741)
T ss_dssp TC--SCCEEEEEEEETTEECCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSS-EE
T ss_pred CC--CcceEEEEECCCCCCcccEEecCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCC-eE
Confidence 00 1358999999876 413333322 22222 3334566776653 46999999774 233344332221 12
Q ss_pred EEEEeCCCCeEEEEecCCCceEEEEEcC--CcceEeecc-cccceeEEEECCCCCEEE-EE---eCCCCEEEEEECCCCc
Q 022387 220 CAVSQGVGSLVLVCPGLQKGQVRVEHYA--SKRTKFIMA-HDSRIACFALTQDGQLLA-TS---STKGTLVRIFNTLDGT 292 (298)
Q Consensus 220 ~~~s~~~d~~~la~sGs~dg~v~i~~~~--~~~~~~~~~-H~~~V~~l~fspdg~~lA-t~---S~Dgt~IrIWd~~tg~ 292 (298)
..+++.. +.+++ +...+|..+||.+. .+....+.. +.+.|..++++|+++.|+ +. ..+++ |.+||+.+|+
T Consensus 367 ~~~~~~~-~~lv~-~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~-i~~~d~~tg~ 443 (741)
T 1yr2_A 367 ESVGIAG-NRLFA-SYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPAT-VLALDPATAK 443 (741)
T ss_dssp EEEEEEB-TEEEE-EEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEE-EEEEETTTTE
T ss_pred EEEEEEC-CEEEE-EEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCE-EEEEECCCCc
Confidence 2344442 34444 57888888776543 444555554 367799999999987665 22 33577 9999999886
Q ss_pred E
Q 022387 293 L 293 (298)
Q Consensus 293 ~ 293 (298)
.
T Consensus 444 ~ 444 (741)
T 1yr2_A 444 T 444 (741)
T ss_dssp E
T ss_pred E
Confidence 3
No 217
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.60 E-value=6.3e-06 Score=70.67 Aligned_cols=145 Identities=8% Similarity=-0.032 Sum_probs=104.9
Q ss_pred CCCEEEEEeCCCCCCCCCCeEEEEeCCCCcEEEEeecCCceEE--EEEeCCeEEEEE--CCeEEEEEcCCCeEEEEEecc
Q 022387 138 RCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRS--VKLRRDRIIVVL--EQKIFVYNFADLKLLHQIETI 213 (298)
Q Consensus 138 ~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~~~~~~~~~~~v~~--v~~~~~~l~v~~--~~~I~iwd~~~~~~i~~~~~~ 213 (298)
++..+..++| .++.|+++|+.+++.+.++ .....+. +.+..+.+.+++ ++.+.+||..+.+.+.++...
T Consensus 63 ~~~~Ly~stG------~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~ 135 (268)
T 3nok_A 63 HQGHFFESTG------HQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRYS 135 (268)
T ss_dssp ETTEEEEEET------TTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEECS
T ss_pred ECCEEEEEcC------CCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeCC
Confidence 3566666664 3577999999999998888 7665544 778888888888 689999999999999999864
Q ss_pred CCCcceEEEEeCCCCeEEEEecCCCceEEEEEcCCcce-Eeec--cccc---ceeEEEECCCCCEEEEEeCCCCEEEEEE
Q 022387 214 ANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRT-KFIM--AHDS---RIACFALTQDGQLLATSSTKGTLVRIFN 287 (298)
Q Consensus 214 ~~~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~~~-~~~~--~H~~---~V~~l~fspdg~~lAt~S~Dgt~IrIWd 287 (298)
... ..+++++. .+++ + ..++.|.+.|..+.++ .++. .+.. .++-|.|. +|+++|..-.++. |.+.|
T Consensus 136 ~eG---wGLt~Dg~-~L~v-S-dGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~-I~vID 207 (268)
T 3nok_A 136 GEG---WGLCYWNG-KLVR-S-DGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSD-VLEID 207 (268)
T ss_dssp SCC---CCEEEETT-EEEE-E-CSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSE-EEEEC
T ss_pred Cce---eEEecCCC-EEEE-E-CCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCe-EEEEe
Confidence 332 34445542 3443 3 3477888888766443 3332 2332 35777887 8888888867777 99999
Q ss_pred CCCCcEEEec
Q 022387 288 TLDGTLLQEG 297 (298)
Q Consensus 288 ~~tg~~l~~~ 297 (298)
.++|+++..+
T Consensus 208 p~TG~V~~~I 217 (268)
T 3nok_A 208 PATGTVVGVI 217 (268)
T ss_dssp TTTCBEEEEE
T ss_pred CCCCcEEEEE
Confidence 9999998764
No 218
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.60 E-value=4.2e-05 Score=66.41 Aligned_cols=192 Identities=6% Similarity=0.006 Sum_probs=108.5
Q ss_pred CCCeEEEEEcCCCCEEEEEcCCeEEEEEcCCCceEEEEeeec---CCceEEEEEecCCCEEEEEeCCCCC--CCCCCeEE
Q 022387 85 PPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFER---GGGIGVVEMLFRCNILALVGGGPDP--QYPLNKVM 159 (298)
Q Consensus 85 ~~~V~~v~fs~dg~~lasgs~~gi~vw~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~v~ 159 (298)
...+.++++++||+++++ ..+++.+|+.++.+......... ......+.+..+++..+...+.... ......-.
T Consensus 53 ~~~~~~i~~~~dG~l~v~-~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~ 131 (297)
T 3g4e_A 53 DAPVSSVALRQSGGYVAT-IGTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGA 131 (297)
T ss_dssp SSCEEEEEEBTTSSEEEE-ETTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEE
T ss_pred CCceEEEEECCCCCEEEE-ECCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcE
Confidence 357999999999995554 47889999988766433322100 1123445566677755433221100 00123345
Q ss_pred EEeCCC-CcEEEEeecCCceEEEEEeCC--eEEEEE--CCeEEEEEc--CCCeEE--EEEecc-CCCcceEEEEeCCCCe
Q 022387 160 IWDDHQ-SRCIGELSFRSEVRSVKLRRD--RIIVVL--EQKIFVYNF--ADLKLL--HQIETI-ANPKGLCAVSQGVGSL 229 (298)
Q Consensus 160 iWD~~~-~~~~~~~~~~~~v~~v~~~~~--~l~v~~--~~~I~iwd~--~~~~~i--~~~~~~-~~~~~~~~~s~~~d~~ 229 (298)
||.+.. ++.............++|+++ .+.++. .+.|.+|++ .++++. +.+... ......-.+..++++.
T Consensus 132 l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~ 211 (297)
T 3g4e_A 132 LYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGK 211 (297)
T ss_dssp EEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSC
T ss_pred EEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCC
Confidence 554443 333322333334567888875 455554 378999997 444432 122111 1111223444566666
Q ss_pred EEEEecCCCceEEEEEcCCc-ceEeecccccceeEEEEC-CCCCE-EEEEeC
Q 022387 230 VLVCPGLQKGQVRVEHYASK-RTKFIMAHDSRIACFALT-QDGQL-LATSST 278 (298)
Q Consensus 230 ~la~sGs~dg~v~i~~~~~~-~~~~~~~H~~~V~~l~fs-pdg~~-lAt~S~ 278 (298)
+.++ ....+.|..|+..+. .+..+..+...+++++|. ||++. ++|...
T Consensus 212 lwva-~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 212 LWVA-CYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp EEEE-EETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEBC
T ss_pred EEEE-EcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcCC
Confidence 6663 556678888998744 445677777789999998 88764 455443
No 219
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.59 E-value=2e-05 Score=67.50 Aligned_cols=183 Identities=9% Similarity=0.060 Sum_probs=120.7
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcC-CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEE
Q 022387 82 SSPPPTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (298)
Q Consensus 82 ~~~~~~V~~v~fs~dg~~lasgs~-~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i 160 (298)
+..+.-...+.|+. +.++.+.+. +.++++|.++++.+... + ........+...++.+..+.. .++.+.+
T Consensus 51 hd~~~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l--~~~~FgeGit~~g~~Ly~ltw------~~~~v~V 120 (268)
T 3nok_A 51 HATNAFTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-R--LGNIFAEGLASDGERLYQLTW------TEGLLFT 120 (268)
T ss_dssp CCTTCCEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-E--CTTCCEEEEEECSSCEEEEES------SSCEEEE
T ss_pred CCCccccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-C--CCCcceeEEEEeCCEEEEEEc------cCCEEEE
Confidence 33444568889884 444445555 55889999998877666 5 233222223334556666553 5689999
Q ss_pred EeCCCCcEEEEeecCCceEEEEEeCCeEEEEE-CCeEEEEEcCCCeEEEEEeccCCCcc---eEEEEeCCCCeEEEEecC
Q 022387 161 WDDHQSRCIGELSFRSEVRSVKLRRDRIIVVL-EQKIFVYNFADLKLLHQIETIANPKG---LCAVSQGVGSLVLVCPGL 236 (298)
Q Consensus 161 WD~~~~~~~~~~~~~~~v~~v~~~~~~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~~~---~~~~s~~~d~~~la~sGs 236 (298)
+|..+.+.+.++.+...-..++...+.++++. +++|.++|..+.+.+.++.....+.. ...+.+. ++.+.|. ..
T Consensus 121 ~D~~Tl~~~~ti~~~~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyan-vw 198 (268)
T 3nok_A 121 WSGMPPQRERTTRYSGEGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYAN-IW 198 (268)
T ss_dssp EETTTTEEEEEEECSSCCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEE-ET
T ss_pred EECCcCcEEEEEeCCCceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEE-EC
Confidence 99999999999998777778888888777765 57999999999999999886443221 1122222 3466653 44
Q ss_pred CCceEEEEEcCCcceE-eecc-----------c--ccceeEEEECCCC-CEEEEE
Q 022387 237 QKGQVRVEHYASKRTK-FIMA-----------H--DSRIACFALTQDG-QLLATS 276 (298)
Q Consensus 237 ~dg~v~i~~~~~~~~~-~~~~-----------H--~~~V~~l~fspdg-~~lAt~ 276 (298)
....|.+-|..+.++. .+.. + ....+.|||+|++ ++|+||
T Consensus 199 ~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 199 HSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp TCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 5667777777666543 2221 1 1357999999975 666666
No 220
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.58 E-value=2.1e-05 Score=72.04 Aligned_cols=187 Identities=8% Similarity=-0.080 Sum_probs=116.3
Q ss_pred EEEcCCCCEEEEEcC-C--eEEEEEcCCCceEEEE-ee-e-cCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCC
Q 022387 91 ISFNQDHGCFAAGTD-H--GFRIYNCDPFREIFRR-DF-E-RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (298)
Q Consensus 91 v~fs~dg~~lasgs~-~--gi~vw~~~~~~~~~~~-~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~ 164 (298)
++|+++|++|+++.. . .+.+|+.......... .+ . .......+.+.+....+.++. .++.|+.||..
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d-------~~~~I~~~d~~ 248 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVD-------SNKNFGRFNVK 248 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEEC-------TTCEEEEEETT
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEE-------CCCcEEEEECC
Confidence 899999998887765 3 4667776554332222 10 0 123344566666445555543 35789999998
Q ss_pred CCcEEEE----eecC-Cce-E-EEEEeC--CeEEEEE--CCeEEEEEcCCCeEEEEEeccCC-------------CcceE
Q 022387 165 QSRCIGE----LSFR-SEV-R-SVKLRR--DRIIVVL--EQKIFVYNFADLKLLHQIETIAN-------------PKGLC 220 (298)
Q Consensus 165 ~~~~~~~----~~~~-~~v-~-~v~~~~--~~l~v~~--~~~I~iwd~~~~~~i~~~~~~~~-------------~~~~~ 220 (298)
++..... .... ... . .+++++ ..+.++. .+.|+.|+.... +..+..+.. -....
T Consensus 249 ~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~ 326 (409)
T 3hrp_A 249 TQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPN 326 (409)
T ss_dssp TCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEE
T ss_pred CCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCe
Confidence 7754322 1111 111 3 888987 3555554 368999987543 334433220 01233
Q ss_pred EEEeCCCCeEEEEecC-CCceEEEEEcCCcceEeeccc---------------ccceeEEEECCCCCEEEEEeCCCCEEE
Q 022387 221 AVSQGVGSLVLVCPGL-QKGQVRVEHYASKRTKFIMAH---------------DSRIACFALTQDGQLLATSSTKGTLVR 284 (298)
Q Consensus 221 ~~s~~~d~~~la~sGs-~dg~v~i~~~~~~~~~~~~~H---------------~~~V~~l~fspdg~~lAt~S~Dgt~Ir 284 (298)
.+..++++.++++ .. .++.|+.++.....+.++.++ -.....|+++++|.++++-..+++ ||
T Consensus 327 gia~d~dG~lyva-d~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~-Ir 404 (409)
T 3hrp_A 327 GMTVDEDGNFYIV-DGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKA-IR 404 (409)
T ss_dssp EEEECTTCCEEEE-ETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCE-EE
T ss_pred EEEEeCCCCEEEE-eCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCe-EE
Confidence 4555666666653 66 788999999766666666555 246899999999999999888888 88
Q ss_pred EEEC
Q 022387 285 IFNT 288 (298)
Q Consensus 285 IWd~ 288 (298)
.+++
T Consensus 405 ~i~~ 408 (409)
T 3hrp_A 405 KYAV 408 (409)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8775
No 221
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.58 E-value=2.9e-05 Score=68.55 Aligned_cols=189 Identities=11% Similarity=0.003 Sum_probs=108.2
Q ss_pred CCeEEEEEcCCCCEEEEEcCCeEEEEEcCCCceEEEEeeec---CCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEe
Q 022387 86 PTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFER---GGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWD 162 (298)
Q Consensus 86 ~~V~~v~fs~dg~~lasgs~~gi~vw~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD 162 (298)
..|.+++|++||+++++. .+++.+|+.++.+......... ...+..+.+..+++..+...+.. .....+.|..+|
T Consensus 90 ~~v~~i~~~~dg~l~v~~-~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~-~~~~~~~l~~~~ 167 (326)
T 2ghs_A 90 FMGSALAKISDSKQLIAS-DDGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRK-AETGAGSIYHVA 167 (326)
T ss_dssp SCEEEEEEEETTEEEEEE-TTEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETT-CCTTCEEEEEEE
T ss_pred CcceEEEEeCCCeEEEEE-CCCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCc-CCCCceEEEEEe
Confidence 479999999999877754 6788899987766432222100 11244555666666544332110 000123455555
Q ss_pred CCCCcEEEEeecCCceEEEEEeCC--eEEEEE--CCeEEEEEcC--CC-eE--EEEEecc-CCCcceEEEEeCCCCeEEE
Q 022387 163 DHQSRCIGELSFRSEVRSVKLRRD--RIIVVL--EQKIFVYNFA--DL-KL--LHQIETI-ANPKGLCAVSQGVGSLVLV 232 (298)
Q Consensus 163 ~~~~~~~~~~~~~~~v~~v~~~~~--~l~v~~--~~~I~iwd~~--~~-~~--i~~~~~~-~~~~~~~~~s~~~d~~~la 232 (298)
+++.............++|+++ .+.++. .+.|.+||+. ++ +. .+.+... ......-.+..+.++.+.+
T Consensus 168 --~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwv 245 (326)
T 2ghs_A 168 --KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWN 245 (326)
T ss_dssp --TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEE
T ss_pred --CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEE
Confidence 4443322222234567888865 355554 3689999985 44 31 1122211 1112233455666667666
Q ss_pred EecCCCceEEEEEcCCcceEeecccccceeEEEEC-CCCCEE-EEEeCC
Q 022387 233 CPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALT-QDGQLL-ATSSTK 279 (298)
Q Consensus 233 ~sGs~dg~v~i~~~~~~~~~~~~~H~~~V~~l~fs-pdg~~l-At~S~D 279 (298)
+ ...++.|..|+.+.+.+..+..+...+++++|+ ++++.| ++...+
T Consensus 246 a-~~~~~~v~~~d~~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 246 A-RWGEGAVDRYDTDGNHIARYEVPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp E-EETTTEEEEECTTCCEEEEEECSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred E-EeCCCEEEEECCCCCEEEEEECCCCCcEEEEEecCCCCEEEEEecCC
Confidence 3 444578888888665556666677789999998 897755 444444
No 222
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.51 E-value=2.8e-05 Score=66.59 Aligned_cols=147 Identities=12% Similarity=0.119 Sum_probs=103.6
Q ss_pred CCEEEEEeCCCCCCCCCCeEEEEeCCCCcEEEEeecCCceEE--EEEeCCeEEEEE--CCeEEEEEcCCCeEEEEEeccC
Q 022387 139 CNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRS--VKLRRDRIIVVL--EQKIFVYNFADLKLLHQIETIA 214 (298)
Q Consensus 139 ~~~~~~~~~~~~~~~~d~~v~iWD~~~~~~~~~~~~~~~v~~--v~~~~~~l~v~~--~~~I~iwd~~~~~~i~~~~~~~ 214 (298)
...+..++|.. ....|+++|+.+++.+.++......+. +....+.+.+++ ++.+.+||..+.+.+.++....
T Consensus 52 ~~~LyestG~~----g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~ 127 (262)
T 3nol_A 52 NGYFYESTGLN----GRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDG 127 (262)
T ss_dssp TTEEEEEEEET----TEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEECSS
T ss_pred CCEEEEECCCC----CCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCC
Confidence 34555554321 124899999999999999887766544 677888998888 6899999999999999998643
Q ss_pred CCcceEEEEeCCCCeEEEEecCCCceEEEEEcCCcce-Eeecc--cc---cceeEEEECCCCCEEEEEeCCCCEEEEEEC
Q 022387 215 NPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRT-KFIMA--HD---SRIACFALTQDGQLLATSSTKGTLVRIFNT 288 (298)
Q Consensus 215 ~~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~~~-~~~~~--H~---~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~ 288 (298)
.. ..+++++ ..|.++ ...+.|.+.|-.+.++ .++.. .. ..++.+.|. +|+++|..-.++. |.+.|.
T Consensus 128 eG---~glt~dg--~~L~~S-dGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~-I~vIDp 199 (262)
T 3nol_A 128 EG---WGLTHND--QYLIMS-DGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNK-IVRIDP 199 (262)
T ss_dssp CC---CCEEECS--SCEEEC-CSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSE-EEEECT
T ss_pred Cc---eEEecCC--CEEEEE-CCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCe-EEEEEC
Confidence 22 3444554 333332 3467788888775443 33322 22 335668886 8888888877777 999999
Q ss_pred CCCcEEEec
Q 022387 289 LDGTLLQEG 297 (298)
Q Consensus 289 ~tg~~l~~~ 297 (298)
++|+++..+
T Consensus 200 ~tG~V~~~I 208 (262)
T 3nol_A 200 ETGKVTGII 208 (262)
T ss_dssp TTCBEEEEE
T ss_pred CCCcEEEEE
Confidence 999998764
No 223
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.47 E-value=0.00015 Score=61.38 Aligned_cols=182 Identities=10% Similarity=0.032 Sum_probs=118.4
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCC---eEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEE
Q 022387 84 PPPTLLHISFNQDHGCFAAGTDH---GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (298)
Q Consensus 84 ~~~~V~~v~fs~dg~~lasgs~~---gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i 160 (298)
...-...+.|+. +.++.+.+.. .++++|.++++.+....+ ........+...++.+..+.. .++.+.+
T Consensus 19 ~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l--~~~~fgeGi~~~~~~ly~ltw------~~~~v~v 89 (243)
T 3mbr_X 19 TTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEV--PPPYFGAGIVAWRDRLIQLTW------RNHEGFV 89 (243)
T ss_dssp TTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEEC--CTTCCEEEEEEETTEEEEEES------SSSEEEE
T ss_pred CccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeC--CCCcceeEEEEeCCEEEEEEe------eCCEEEE
Confidence 344677899987 5544444443 588999999988777765 233222222233555665553 5689999
Q ss_pred EeCCCCcEEEEeecCCceEEEEEeCCeEEEEE-CCeEEEEEcCCCeEEEEEeccCCC--cc-eEEEEeCCCCeEEEEecC
Q 022387 161 WDDHQSRCIGELSFRSEVRSVKLRRDRIIVVL-EQKIFVYNFADLKLLHQIETIANP--KG-LCAVSQGVGSLVLVCPGL 236 (298)
Q Consensus 161 WD~~~~~~~~~~~~~~~v~~v~~~~~~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~--~~-~~~~s~~~d~~~la~sGs 236 (298)
+|..+.+.+.++.+...-..++...+.+.++. +++|.++|..+.+.+.+++...+. +. ...+.+. ++.++|. .-
T Consensus 90 ~D~~tl~~~~ti~~~~~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyan-vw 167 (243)
T 3mbr_X 90 YDLATLTPRARFRYPGEGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLAN-VW 167 (243)
T ss_dssp EETTTTEEEEEEECSSCCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEE-ET
T ss_pred EECCcCcEEEEEeCCCCceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEE-EC
Confidence 99999999999998877778887777777664 479999999999999998864322 11 1122222 3456553 33
Q ss_pred CCceEEEEEcCCcceE-eec--c-----------cccceeEEEECCCC-CEEEEE
Q 022387 237 QKGQVRVEHYASKRTK-FIM--A-----------HDSRIACFALTQDG-QLLATS 276 (298)
Q Consensus 237 ~dg~v~i~~~~~~~~~-~~~--~-----------H~~~V~~l~fspdg-~~lAt~ 276 (298)
.+..|.+-|..+.++. .+. + -....+.|||+|++ ++|+||
T Consensus 168 ~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 168 LTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp TTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred CCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 4556666666665533 221 1 11357999999976 555555
No 224
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.47 E-value=0.00011 Score=67.55 Aligned_cols=195 Identities=11% Similarity=0.045 Sum_probs=116.7
Q ss_pred Ec--CCCCEEEEEcC--CeEEEEEcCCC--ceEEEEeee-------cC-CceEEEEEecCCCEEEEEeCCCCCCCCCCeE
Q 022387 93 FN--QDHGCFAAGTD--HGFRIYNCDPF--REIFRRDFE-------RG-GGIGVVEMLFRCNILALVGGGPDPQYPLNKV 158 (298)
Q Consensus 93 fs--~dg~~lasgs~--~gi~vw~~~~~--~~~~~~~~~-------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v 158 (298)
++ .++++|.+.+. +.|.|+|+.+. +........ .+ ..-..+.+.+++ .++.+.|+.+. -..+.|
T Consensus 89 ~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g-~~~g~v 166 (462)
T 2ece_A 89 GKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEG-EGPGGI 166 (462)
T ss_dssp CCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTS-CSCCEE
T ss_pred cCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCC-CCCCeE
Confidence 36 88998887664 44889998643 322222220 01 012233455666 44433332111 135889
Q ss_pred EEEeCCCCcEEEEeecCC----ceEEEEEeCC--eEEEEE--------------------CCeEEEEEcCCCeEEEEEec
Q 022387 159 MIWDDHQSRCIGELSFRS----EVRSVKLRRD--RIIVVL--------------------EQKIFVYNFADLKLLHQIET 212 (298)
Q Consensus 159 ~iWD~~~~~~~~~~~~~~----~v~~v~~~~~--~l~v~~--------------------~~~I~iwd~~~~~~i~~~~~ 212 (298)
.+.|..+.+.+.++.... -.+.+.++++ .+++.. .++|.+||+.+.+.+.++..
T Consensus 167 ~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~v 246 (462)
T 2ece_A 167 LMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTL 246 (462)
T ss_dssp EEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEES
T ss_pred EEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEec
Confidence 999999999999887432 1334666654 344432 47999999999998888886
Q ss_pred cCCCc--ceEEEEeCCCCeEEEEecC-----CCceEEEEEcCCcceE---e--eccc----------------ccceeEE
Q 022387 213 IANPK--GLCAVSQGVGSLVLVCPGL-----QKGQVRVEHYASKRTK---F--IMAH----------------DSRIACF 264 (298)
Q Consensus 213 ~~~~~--~~~~~s~~~d~~~la~sGs-----~dg~v~i~~~~~~~~~---~--~~~H----------------~~~V~~l 264 (298)
..... .-+.|.+++++.+..+.+. .++.|.+|..+.+... . +... ...+..|
T Consensus 247 g~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I 326 (462)
T 2ece_A 247 GEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDI 326 (462)
T ss_dssp CTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCE
T ss_pred CCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEE
Confidence 42211 1234555666665555455 6778877554332211 1 1110 2458899
Q ss_pred EECCCCCEEEEEeCCCCEEEEEECC
Q 022387 265 ALTQDGQLLATSSTKGTLVRIFNTL 289 (298)
Q Consensus 265 ~fspdg~~lAt~S~Dgt~IrIWd~~ 289 (298)
.+|+||++|-.+......|.+||+.
T Consensus 327 ~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 327 DISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp EECTTSCEEEEEETTTTEEEEEECS
T ss_pred EECCCCCEEEEEeCCCCEEEEEEec
Confidence 9999999888776644349999986
No 225
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.47 E-value=2.7e-05 Score=76.00 Aligned_cols=196 Identities=12% Similarity=0.040 Sum_probs=120.4
Q ss_pred EEEEEcCCCCEEEEEcCC-e-------------EEEEEcCCCce--EEEEeeec--CCceEEEEEecCCCEEEEEeCCCC
Q 022387 89 LHISFNQDHGCFAAGTDH-G-------------FRIYNCDPFRE--IFRRDFER--GGGIGVVEMLFRCNILALVGGGPD 150 (298)
Q Consensus 89 ~~v~fs~dg~~lasgs~~-g-------------i~vw~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 150 (298)
..++|+ ||+.|+.++.+ . +.+|++.+... ....+... ......+.+++++..+++......
T Consensus 178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~ 256 (693)
T 3iuj_A 178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANST 256 (693)
T ss_dssp CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSS
T ss_pred ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCC
Confidence 467899 99988877653 1 67888876542 22222100 112455677888888877653221
Q ss_pred CCCCCCeEEEEeCCCCc-EEEEeecC-CceEE-EEEeCCeEEEEEC-----CeEEEEEcCCCeE--EEEEeccCCCcceE
Q 022387 151 PQYPLNKVMIWDDHQSR-CIGELSFR-SEVRS-VKLRRDRIIVVLE-----QKIFVYNFADLKL--LHQIETIANPKGLC 220 (298)
Q Consensus 151 ~~~~d~~v~iWD~~~~~-~~~~~~~~-~~v~~-v~~~~~~l~v~~~-----~~I~iwd~~~~~~--i~~~~~~~~~~~~~ 220 (298)
..+.|.+||+.++. ....+... ..... +....+.+++.++ ..|..+|+.+.+. .+.+..+.....
T Consensus 257 ---~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~-- 331 (693)
T 3iuj_A 257 ---SGNRLYVKDLSQENAPLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL-- 331 (693)
T ss_dssp ---SCCEEEEEETTSTTCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--
T ss_pred ---CCcEEEEEECCCCCCceEEEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--
Confidence 34689999998763 23334332 22323 3444566666653 4899999976543 345555544332
Q ss_pred EEEeCCCCeEEEEecCCCc--eEEEEEcCCcceEeec-ccccceeEEEECCCCCEEEEEeCC----CCEEEEEECCCCcE
Q 022387 221 AVSQGVGSLVLVCPGLQKG--QVRVEHYASKRTKFIM-AHDSRIACFALTQDGQLLATSSTK----GTLVRIFNTLDGTL 293 (298)
Q Consensus 221 ~~s~~~d~~~la~sGs~dg--~v~i~~~~~~~~~~~~-~H~~~V~~l~fspdg~~lAt~S~D----gt~IrIWd~~tg~~ 293 (298)
.+++++ ..|++....+| .|.+|+.+.+....+. .+.+.+..+.++++++.|+....+ ++ |.+||+.+++.
T Consensus 332 ~~s~~g--~~lv~~~~~~g~~~l~~~d~~g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~-l~~~d~~~g~~ 408 (693)
T 3iuj_A 332 TVHSGS--GYLFAEYMVDATARVEQFDYEGKRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPT-LYRFEPKSGAI 408 (693)
T ss_dssp EEEEET--TEEEEEEEETTEEEEEEECTTSCEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCE-EEEECTTTCCE
T ss_pred EEEEEC--CEEEEEEEECCeeEEEEEECCCCeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCE-EEEEECCCCeE
Confidence 777765 44554456666 5666888766555443 345668888889998766655434 67 99999988763
No 226
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.46 E-value=9.4e-05 Score=62.65 Aligned_cols=149 Identities=15% Similarity=0.131 Sum_probs=105.3
Q ss_pred cCCCEEEEEeCCCCCCCCCCeEEEEeCCCCcEEEEeecCCceE--EEEEeCCeEEEEE--CCeEEEEEcCCCeEEEEEec
Q 022387 137 FRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVR--SVKLRRDRIIVVL--EQKIFVYNFADLKLLHQIET 212 (298)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~~~~~~~~~~~v~--~v~~~~~~l~v~~--~~~I~iwd~~~~~~i~~~~~ 212 (298)
+++..+..++|.. ....|+++|+.+++.+.++......+ .+.+..+.+.+++ ++.+.+||..+.+.+.++..
T Consensus 28 ~~~~~LyestG~~----g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~ 103 (243)
T 3mbr_X 28 YLRGHLYESTGET----GRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRY 103 (243)
T ss_dssp EETTEEEEEECCT----TSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEEC
T ss_pred EECCEEEEECCCC----CCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeC
Confidence 3445666665432 24689999999999999988776543 4577788888887 68999999999999999986
Q ss_pred cCCCcceEEEEeCCCCeEEEEecCCCceEEEEEcCCcce-Eeec--ccc---cceeEEEECCCCCEEEEEeCCCCEEEEE
Q 022387 213 IANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRT-KFIM--AHD---SRIACFALTQDGQLLATSSTKGTLVRIF 286 (298)
Q Consensus 213 ~~~~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~~~-~~~~--~H~---~~V~~l~fspdg~~lAt~S~Dgt~IrIW 286 (298)
.... ..++.++. .+++ | ..++.|.+.|..+..+ .++. .+. ..++-|.+. +|+++|..-.+.. |.+.
T Consensus 104 ~~~G---wglt~dg~-~L~v-S-dgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~-I~vI 175 (243)
T 3mbr_X 104 PGEG---WALTSDDS-HLYM-S-DGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSR-IARI 175 (243)
T ss_dssp SSCC---CEEEECSS-CEEE-E-CSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTE-EEEE
T ss_pred CCCc---eEEeeCCC-EEEE-E-CCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCe-EEEE
Confidence 5432 34455542 3443 2 3467888888766443 3332 232 245667766 7888888866777 9999
Q ss_pred ECCCCcEEEec
Q 022387 287 NTLDGTLLQEG 297 (298)
Q Consensus 287 d~~tg~~l~~~ 297 (298)
|.++|+++..+
T Consensus 176 Dp~tG~V~~~i 186 (243)
T 3mbr_X 176 DPASGKVVAWI 186 (243)
T ss_dssp CTTTCBEEEEE
T ss_pred ECCCCCEEEEE
Confidence 99999998764
No 227
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.44 E-value=0.0001 Score=64.19 Aligned_cols=194 Identities=11% Similarity=-0.002 Sum_probs=109.1
Q ss_pred CCCCeEEEEEcCCCCEEEEEcC-CeEEEEEcCCCceEEEE-eee--cCCceEEEEEecCCCEEEEEe--CCC--------
Q 022387 84 PPPTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRR-DFE--RGGGIGVVEMLFRCNILALVG--GGP-------- 149 (298)
Q Consensus 84 ~~~~V~~v~fs~dg~~lasgs~-~gi~vw~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~--~~~-------- 149 (298)
+...+.+++++++|+++++... +++.+|+.+ ++..... ... ....+..+.+..+++..++-. +..
T Consensus 84 ~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~ 162 (305)
T 3dr2_A 84 ATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPA 162 (305)
T ss_dssp SCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCC
T ss_pred CCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCcccccccccc
Confidence 3456899999999998777655 678888876 3322111 110 011223455666666554311 000
Q ss_pred CCCCCCCeEEEEeCCCCcEEEEeecCCceEEEEEeCC--eEEEEEC-------CeEEEEEcCCCeEE--EEEeccCCCcc
Q 022387 150 DPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRD--RIIVVLE-------QKIFVYNFADLKLL--HQIETIANPKG 218 (298)
Q Consensus 150 ~~~~~d~~v~iWD~~~~~~~~~~~~~~~v~~v~~~~~--~l~v~~~-------~~I~iwd~~~~~~i--~~~~~~~~~~~ 218 (298)
......+.|..+|..+++..... .......++|+++ .+.++.. +.|.+|++....+. ..+... ....
T Consensus 163 ~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~-~~~~ 240 (305)
T 3dr2_A 163 DPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASV-PDGL 240 (305)
T ss_dssp CCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECC-SSSC
T ss_pred ccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEEC-CCCC
Confidence 00001256888888766544332 2234567888875 3555543 58999998654411 111110 1111
Q ss_pred eEEEEeCCCCeEEEEecCCCceEEEEEcCCcceEeecccccceeEEEECCCCCEEEEEeCCCCEEEE
Q 022387 219 LCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRI 285 (298)
Q Consensus 219 ~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~~~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrI 285 (298)
.-.+..+.++.+.+ +..+| |.+|+.+.+.+..+..+. .+.+++|+++++.|..++.++- .++
T Consensus 241 pdgi~~d~~G~lwv--~~~~g-v~~~~~~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l-~~~ 302 (305)
T 3dr2_A 241 PDGFCVDRGGWLWS--SSGTG-VCVFDSDGQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCL-WML 302 (305)
T ss_dssp CCSEEECTTSCEEE--CCSSE-EEEECTTSCEEEEEECSS-CCCEEEECTTSCEEEEEETTEE-EEE
T ss_pred CCeEEECCCCCEEE--ecCCc-EEEECCCCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeE-EEE
Confidence 11234455667666 34444 888888766666665554 5999999999987777766543 444
No 228
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.42 E-value=0.00033 Score=60.26 Aligned_cols=155 Identities=11% Similarity=-0.007 Sum_probs=109.6
Q ss_pred EEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCCcEEEEeecCC--ceEEEEEeCCeEEEEE--CCeEEEEEcCCCeE
Q 022387 131 GVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRS--EVRSVKLRRDRIIVVL--EQKIFVYNFADLKL 206 (298)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~~~~~~~~~~--~v~~v~~~~~~l~v~~--~~~I~iwd~~~~~~ 206 (298)
..+.+..+ ..+..+++.. .++.|++.|..+++.+.++.... ....+.+..+.+.++. ++.+.++|..+.+.
T Consensus 24 ~Gl~~~~d-g~Lyvstg~~----~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v 98 (266)
T 2iwa_A 24 QGLVYAEN-DTLFESTGLY----GRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSN 98 (266)
T ss_dssp EEEEECST-TEEEEEECST----TTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTTTEE
T ss_pred ccEEEeCC-CeEEEECCCC----CCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCCCcE
Confidence 45566654 3555555321 35789999999999998887644 3345777888888887 58999999999999
Q ss_pred EEEEeccCCCcceEEEEeCCCCeEEEEecCCCceEEEEEcCCcce-Eeec--ccc---cceeEEEECCCCCEEEEEeCCC
Q 022387 207 LHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRT-KFIM--AHD---SRIACFALTQDGQLLATSSTKG 280 (298)
Q Consensus 207 i~~~~~~~~~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~~~-~~~~--~H~---~~V~~l~fspdg~~lAt~S~Dg 280 (298)
+.++... .+. -..+++++.. +++ + ..++.|.+.|..+.++ ..+. .+. ..++.+.|. +|+++|....++
T Consensus 99 ~~~i~~g-~~~-g~glt~Dg~~-l~v-s-~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~ 172 (266)
T 2iwa_A 99 IKNFTHQ-MKD-GWGLATDGKI-LYG-S-DGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTD 172 (266)
T ss_dssp EEEEECC-SSS-CCEEEECSSS-EEE-E-CSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSS
T ss_pred EEEEECC-CCC-eEEEEECCCE-EEE-E-CCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCC
Confidence 9998765 232 2457776533 333 2 3578999988776443 3332 222 247788998 888888887777
Q ss_pred CEEEEEECCCCcEEEec
Q 022387 281 TLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 281 t~IrIWd~~tg~~l~~~ 297 (298)
. |.+-|..+|+++.++
T Consensus 173 ~-V~vID~~tg~V~~~I 188 (266)
T 2iwa_A 173 C-IARISAKDGTLLGWI 188 (266)
T ss_dssp E-EEEEETTTCCEEEEE
T ss_pred e-EEEEECCCCcEEEEE
Confidence 7 999999999998764
No 229
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.41 E-value=5e-05 Score=66.14 Aligned_cols=193 Identities=10% Similarity=-0.014 Sum_probs=109.9
Q ss_pred CCeEEEEEcCCCC-EEEEEcC-CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeC
Q 022387 86 PTLLHISFNQDHG-CFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (298)
Q Consensus 86 ~~V~~v~fs~dg~-~lasgs~-~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~ 163 (298)
.-..+..|+++|+ ++.++.. +++..|+.. .+. ..... +......+.+..++++++... ..+.|.+||.
T Consensus 45 ~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~~-~~~~~-~~~~~~gl~~d~dG~l~v~~~-------~~~~v~~~~~ 114 (305)
T 3dr2_A 45 TWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GTV-DVLLD-ATAFTNGNAVDAQQRLVHCEH-------GRRAITRSDA 114 (305)
T ss_dssp SSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SCE-EEEEE-SCSCEEEEEECTTSCEEEEET-------TTTEEEEECT
T ss_pred cCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CCE-EEEeC-CCCccceeeECCCCCEEEEEC-------CCCEEEEECC
Confidence 3567899999999 5556665 557788773 332 22221 245566777777777544332 2367999998
Q ss_pred CCCcEEEEee-cC----CceEEEEEeCCeEEEEEC--------------------CeEEEEEcCCCeEEEEEeccCCCcc
Q 022387 164 HQSRCIGELS-FR----SEVRSVKLRRDRIIVVLE--------------------QKIFVYNFADLKLLHQIETIANPKG 218 (298)
Q Consensus 164 ~~~~~~~~~~-~~----~~v~~v~~~~~~l~v~~~--------------------~~I~iwd~~~~~~i~~~~~~~~~~~ 218 (298)
. ++...... .. ..+..+.++++.-+..++ +.|..||..+++..... . .....
T Consensus 115 ~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~-~~~p~ 191 (305)
T 3dr2_A 115 D-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-D-LDHPN 191 (305)
T ss_dssp T-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-E-ESSEE
T ss_pred C-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-c-CCCCc
Confidence 6 54322211 11 235567787765444421 35666776555443222 2 12223
Q ss_pred eEEEEeCCCCeEEEEecCC-----CceEEEEEcCCcceE---ee-cccccceeEEEECCCCCEEEEEeCCCCEEEEEECC
Q 022387 219 LCAVSQGVGSLVLVCPGLQ-----KGQVRVEHYASKRTK---FI-MAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTL 289 (298)
Q Consensus 219 ~~~~s~~~d~~~la~sGs~-----dg~v~i~~~~~~~~~---~~-~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~ 289 (298)
.+++++ |+..|.++.+. ++.|.+++.....+. .+ ......+..|+++++|+++++. .+. |.+|+.
T Consensus 192 gl~~sp--dg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~--~~g-v~~~~~- 265 (305)
T 3dr2_A 192 GLAFSP--DEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS--GTG-VCVFDS- 265 (305)
T ss_dssp EEEECT--TSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC--SSE-EEEECT-
T ss_pred ceEEcC--CCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEec--CCc-EEEECC-
Confidence 345544 44544433333 267888887643221 11 2234457789999999977766 345 899997
Q ss_pred CCcEEEec
Q 022387 290 DGTLLQEG 297 (298)
Q Consensus 290 tg~~l~~~ 297 (298)
+|+.+.++
T Consensus 266 ~g~~~~~~ 273 (305)
T 3dr2_A 266 DGQLLGHI 273 (305)
T ss_dssp TSCEEEEE
T ss_pred CCCEEEEE
Confidence 57766554
No 230
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.37 E-value=7.1e-05 Score=67.90 Aligned_cols=191 Identities=9% Similarity=0.002 Sum_probs=118.9
Q ss_pred EEEcCCCCEEEEEcC------CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCC-C--CCCCCeEEEE
Q 022387 91 ISFNQDHGCFAAGTD------HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPD-P--QYPLNKVMIW 161 (298)
Q Consensus 91 v~fs~dg~~lasgs~------~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~d~~v~iW 161 (298)
+...||++.+.+... +.+.++|..+.+.+.+... ..... +.+++++..++++..-.. . .-.++.|.+|
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~v--G~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~Vsvi 114 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDG--GFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVF 114 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEE--CSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEEC--CCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEE
Confidence 345688887776643 3477899999887766664 33334 888999988877651000 0 0024679999
Q ss_pred eCCCCcEEEEeecCC--------ceEEEEEeC--CeEEEEE---CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCC
Q 022387 162 DDHQSRCIGELSFRS--------EVRSVKLRR--DRIIVVL---EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGS 228 (298)
Q Consensus 162 D~~~~~~~~~~~~~~--------~v~~v~~~~--~~l~v~~---~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~ 228 (298)
|..+.+.+.++.... ....+.+++ ++++++. ++.|.++|+.+.+.+.++.... +..+.+.+..
T Consensus 115 D~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g----~~~~~P~g~~ 190 (386)
T 3sjl_D 115 DPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD----CYHIFPTAPD 190 (386)
T ss_dssp CTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS----EEEEEEEETT
T ss_pred ECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC----cceeecCCCc
Confidence 999999988886532 344577776 4566664 3799999999999999987532 1222233322
Q ss_pred eEEEEecCCCceEEEEEcCC-cceE-eeccc----ccce-eEEEEC-CCCCEEEEEeCCCCEEEEEECCCCc
Q 022387 229 LVLVCPGLQKGQVRVEHYAS-KRTK-FIMAH----DSRI-ACFALT-QDGQLLATSSTKGTLVRIFNTLDGT 292 (298)
Q Consensus 229 ~~la~sGs~dg~v~i~~~~~-~~~~-~~~~H----~~~V-~~l~fs-pdg~~lAt~S~Dgt~IrIWd~~tg~ 292 (298)
.+++ .+.||.+.+.+... ..+. +...+ ..++ ...+|. ++|+++. .+.+|+ |.+.|+.+++
T Consensus 191 ~~~~--~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~-V~v~d~~~~~ 258 (386)
T 3sjl_D 191 TFFM--HCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGK-IHQIDLSSGD 258 (386)
T ss_dssp EEEE--EETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSE-EEEEECTTSS
T ss_pred eeEE--ECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCE-EEEEECCCCc
Confidence 3443 35577777766643 2321 11111 1222 234664 7886544 555888 9999997664
No 231
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.36 E-value=0.00019 Score=64.03 Aligned_cols=188 Identities=10% Similarity=0.046 Sum_probs=110.0
Q ss_pred CCEEEEEcC-CeEEEEEcCCCceEEEEeeecC-------CceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCCcE
Q 022387 97 HGCFAAGTD-HGFRIYNCDPFREIFRRDFERG-------GGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRC 168 (298)
Q Consensus 97 g~~lasgs~-~gi~vw~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~~ 168 (298)
+..|.+++. +.+..||.++++.++....... ..............+.+.+ .++.|..+|..+++.
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~-------~~g~l~a~d~~tG~~ 125 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGS-------EKAQVYALNTSDGTV 125 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEE-------TTSEEEEEETTTCCE
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEc-------CCCEEEEEECCCCCE
Confidence 455666665 5678999999888777664100 1111112222345555555 468899999999998
Q ss_pred EEEeecCCceE-EEEEeCCeEEEEE-CCeEEEEEcCCCeEEEEEeccCCCc-----ceEEEEeCCCCeEEEEecCCCceE
Q 022387 169 IGELSFRSEVR-SVKLRRDRIIVVL-EQKIFVYNFADLKLLHQIETIANPK-----GLCAVSQGVGSLVLVCPGLQKGQV 241 (298)
Q Consensus 169 ~~~~~~~~~v~-~v~~~~~~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~~-----~~~~~s~~~d~~~la~sGs~dg~v 241 (298)
+........+. ......+.+++.+ ++.|..+|..+++.+.++....... ....+. ++.+++ |..+|.|
T Consensus 126 ~W~~~~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~---~~~v~~--g~~~g~l 200 (376)
T 3q7m_A 126 AWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA---FGAAVV--GGDNGRV 200 (376)
T ss_dssp EEEEECSSCCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE---TTEEEE--CCTTTEE
T ss_pred EEEEeCCCceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE---CCEEEE--EcCCCEE
Confidence 87776654332 2234456666665 4789999999999888876543221 222222 234444 7888888
Q ss_pred EEEEcCCcceE-eeccccc-------ceeEEEECC--CCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 242 RVEHYASKRTK-FIMAHDS-------RIACFALTQ--DGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 242 ~i~~~~~~~~~-~~~~H~~-------~V~~l~fsp--dg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
..++..+.... ....... .+..+.-.| .+..+..++.++. +..+|.++|+.+.++
T Consensus 201 ~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~-l~~~d~~tG~~~w~~ 265 (376)
T 3q7m_A 201 SAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGN-LTALDLRSGQIMWKR 265 (376)
T ss_dssp EEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSC-EEEEETTTCCEEEEE
T ss_pred EEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcE-EEEEECCCCcEEeec
Confidence 88887665433 3221100 000010111 2345666667888 888888888877553
No 232
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.31 E-value=0.0006 Score=60.02 Aligned_cols=140 Identities=12% Similarity=0.186 Sum_probs=101.0
Q ss_pred CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCCcEEEEeecCCceEEEEE-e
Q 022387 106 HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKL-R 184 (298)
Q Consensus 106 ~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~~~~~~~~~~~v~~v~~-~ 184 (298)
..+.|.|+.......++.. ..+-.+ +.+....+|+-.+ +++.|+|+++++.+..+.+...|.-+.| +
T Consensus 49 ~~VvIiDl~n~~~~~Rrpi--~AdsAI--MnP~~~ViALrag--------~~LQiFnletK~klks~~~~e~VvfWkWis 116 (365)
T 2xzh_A 49 AQVVIIDMNDPSNPIRRPI--SADSAI--MNPASKVIALKAG--------KTLQIFNIEMKSKMKAHTMTDDVTFWKWIS 116 (365)
T ss_dssp EEEEEEETTSTTSCEEEEC--CCSEEE--ECSSSSEEEEEET--------TEEEEEETTTTEEEEEEECSSCEEEEEECS
T ss_pred CEEEEEECCCCCCcccccc--ccceee--eCCCccEEEEecC--------CeEEEechHHhhhhcceecCCccEEEEecC
Confidence 3577899988776666664 343333 4677777887662 6799999999999999999999998888 5
Q ss_pred CCeEEEEECCeEEEEEcC-CCeEEEEEeccCC--CcceEEEEeCCCCeEEEEecC------CCceEEEEEcCCcceEeec
Q 022387 185 RDRIIVVLEQKIFVYNFA-DLKLLHQIETIAN--PKGLCAVSQGVGSLVLVCPGL------QKGQVRVEHYASKRTKFIM 255 (298)
Q Consensus 185 ~~~l~v~~~~~I~iwd~~-~~~~i~~~~~~~~--~~~~~~~s~~~d~~~la~sGs------~dg~v~i~~~~~~~~~~~~ 255 (298)
++.+...++..|+-|++. +..+.+.+..|.. ...++.+..+++..+++..|- ..|.+.+|..+.+....+.
T Consensus 117 ~~~L~lVT~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ie 196 (365)
T 2xzh_A 117 LNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIE 196 (365)
T ss_dssp SSEEEEEESSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEEC
T ss_pred CCeEEEEcCCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccceee
Confidence 788888999999999995 4567777776553 344567777777777766553 3567777776654433444
Q ss_pred cc
Q 022387 256 AH 257 (298)
Q Consensus 256 ~H 257 (298)
+|
T Consensus 197 Gh 198 (365)
T 2xzh_A 197 GH 198 (365)
T ss_dssp CS
T ss_pred ee
Confidence 44
No 233
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.28 E-value=0.00086 Score=60.45 Aligned_cols=116 Identities=7% Similarity=-0.131 Sum_probs=75.9
Q ss_pred EcCCCCEEEEEc--C-C---eEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCC---CCCCCeEEEEeC
Q 022387 93 FNQDHGCFAAGT--D-H---GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDP---QYPLNKVMIWDD 163 (298)
Q Consensus 93 fs~dg~~lasgs--~-~---gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~d~~v~iWD~ 163 (298)
..||+.++.+.. . + .+.+||.++.+.+..... ...- .+.+++++..++++...... ...++.|.+||.
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~--g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~ 104 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNG--GFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDP 104 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecC--CCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEEC
Confidence 346776555443 2 2 667999998876655442 2223 77888899888887521000 002578999999
Q ss_pred CCCcEEEEeecC--------CceEEEEEeC--CeEEEEE---CCeEEEEEcCCCeEEEE-Eec
Q 022387 164 HQSRCIGELSFR--------SEVRSVKLRR--DRIIVVL---EQKIFVYNFADLKLLHQ-IET 212 (298)
Q Consensus 164 ~~~~~~~~~~~~--------~~v~~v~~~~--~~l~v~~---~~~I~iwd~~~~~~i~~-~~~ 212 (298)
.+.+.+.++... .....+.+++ ++++++. ++.|.++| .+++.+.+ +..
T Consensus 105 ~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~ 166 (373)
T 2mad_H 105 VTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSS 166 (373)
T ss_pred CCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCC
Confidence 998888777653 1234567765 4666664 36899999 99998877 653
No 234
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.27 E-value=0.00054 Score=61.12 Aligned_cols=182 Identities=9% Similarity=0.030 Sum_probs=111.8
Q ss_pred CCCEEEEEcC-CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCCcEEEEeec
Q 022387 96 DHGCFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSF 174 (298)
Q Consensus 96 dg~~lasgs~-~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~~~~~~~~ 174 (298)
++..|.+++. +.+..+|.++++..+.... ...+...... ....+++.+ .++.|..+|..+++.+.....
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~--~~~~~~~p~~-~~~~v~v~~-------~~g~l~~~d~~tG~~~W~~~~ 171 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKV--AGEALSRPVV-SDGLVLIHT-------SNGQLQALNEADGAVKWTVNL 171 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEEC--SSCCCSCCEE-ETTEEEEEC-------TTSEEEEEETTTCCEEEEEEC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeC--CCceEcCCEE-ECCEEEEEc-------CCCeEEEEECCCCcEEEEEeC
Confidence 3445555655 5588999999988777664 2222111111 133444544 468899999999998877765
Q ss_pred CCceE------EEEEeCCeEEEEE-CCeEEEEEcCCCeEEEEEeccCCC-----------cceEEEEeCCCCeEEEEecC
Q 022387 175 RSEVR------SVKLRRDRIIVVL-EQKIFVYNFADLKLLHQIETIANP-----------KGLCAVSQGVGSLVLVCPGL 236 (298)
Q Consensus 175 ~~~v~------~v~~~~~~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~-----------~~~~~~s~~~d~~~la~sGs 236 (298)
...+. ......+.++++. ++.|..+|..+++.+.++...... .....+. ++.+++ ++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~---~~~v~~--~~ 246 (376)
T 3q7m_A 172 DMPSLSLRGESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVV---NGVVFA--LA 246 (376)
T ss_dssp CC-----CCCCCCEEETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEE---TTEEEE--EC
T ss_pred CCCceeecCCCCcEEECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEE---CCEEEE--Ee
Confidence 44332 2233455666655 478999999999988877643110 0111222 234554 57
Q ss_pred CCceEEEEEcCCcceE-eecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 237 QKGQVRVEHYASKRTK-FIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 237 ~dg~v~i~~~~~~~~~-~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
.+|.+..++..+.... ... ......+.. ++..|..++.++. |..+|..+|+.+.++
T Consensus 247 ~~g~l~~~d~~tG~~~w~~~--~~~~~~~~~--~~~~l~~~~~~g~-l~~~d~~tG~~~w~~ 303 (376)
T 3q7m_A 247 YNGNLTALDLRSGQIMWKRE--LGSVNDFIV--DGNRIYLVDQNDR-VMALTIDGGVTLWTQ 303 (376)
T ss_dssp TTSCEEEEETTTCCEEEEEC--CCCEEEEEE--ETTEEEEEETTCC-EEEEETTTCCEEEEE
T ss_pred cCcEEEEEECCCCcEEeecc--CCCCCCceE--ECCEEEEEcCCCe-EEEEECCCCcEEEee
Confidence 7888888888765543 322 223444444 3556777778999 999999999987654
No 235
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.27 E-value=1e-07 Score=86.23 Aligned_cols=143 Identities=11% Similarity=0.016 Sum_probs=75.3
Q ss_pred CCCEEEEEeCCCCCCCCCCeEEEEeCCCCcEEEEeecCCceEEEEEe-CCeEEEE--ECCeEEEEEcCCCeEEEEEeccC
Q 022387 138 RCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLR-RDRIIVV--LEQKIFVYNFADLKLLHQIETIA 214 (298)
Q Consensus 138 ~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~~~~~~~~~~~v~~v~~~-~~~l~v~--~~~~I~iwd~~~~~~i~~~~~~~ 214 (298)
....+++++ .|+.|+.||..+++.+.++.. ..+.+..+. .+.+++. .++.|+.||..+++.+.++..+.
T Consensus 8 ~~~~v~~gs-------~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~ 79 (369)
T 2hz6_A 8 PETLLFVST-------LDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTI 79 (369)
T ss_dssp CTTEEEEEE-------TTSEEEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCH
T ss_pred eCCEEEEEc-------CCCEEEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccC
Confidence 345566665 578999999999999888776 444433332 2334443 36899999998887766654321
Q ss_pred C-Cc-ceEEEEeCCCCeEEEEecCCCceEEEEEcCCcce-EeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCC
Q 022387 215 N-PK-GLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRT-KFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDG 291 (298)
Q Consensus 215 ~-~~-~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~~~-~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg 291 (298)
. .. ....+. .+ ..++ .|+.+|.|..||..+++. ..+..+. .+.++|++..+++++.|+. |+.||.++|
T Consensus 80 ~~~~~~sp~~~--~~-~~v~-~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~-v~a~d~~tG 150 (369)
T 2hz6_A 80 PELVQASPCRS--SD-GILY-MGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYT-ITMYDTKTR 150 (369)
T ss_dssp HHHHTTCSCC--------CC-CCEEEEEEEEECCC--------------------------EEEEEEEEE-EECCCSSSS
T ss_pred ccccccCceEe--cC-CEEE-EEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCE-EEEEECCCC
Confidence 0 00 111111 12 3344 388899999999886654 3554443 2456778899999999999 999999999
Q ss_pred cEEEec
Q 022387 292 TLLQEG 297 (298)
Q Consensus 292 ~~l~~~ 297 (298)
+++.++
T Consensus 151 ~~~W~~ 156 (369)
T 2hz6_A 151 ELRWNA 156 (369)
T ss_dssp SCCCEE
T ss_pred CEEEeE
Confidence 987553
No 236
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.26 E-value=5.3e-05 Score=67.31 Aligned_cols=192 Identities=12% Similarity=0.043 Sum_probs=109.5
Q ss_pred CCCCeEEEEEcCCCCEEEEEc------CCeEEEEEcCCCceEEEEeee-----cCCceEEEEEecCCCEEEEEeCCCCCC
Q 022387 84 PPPTLLHISFNQDHGCFAAGT------DHGFRIYNCDPFREIFRRDFE-----RGGGIGVVEMLFRCNILALVGGGPDPQ 152 (298)
Q Consensus 84 ~~~~V~~v~fs~dg~~lasgs------~~gi~vw~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (298)
+-..+.+|+|+++|+++++.. ...+.+||..+.+.+....+. +......+.+..+...+.++..+..
T Consensus 65 ~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~-- 142 (343)
T 2qe8_A 65 TFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD-- 142 (343)
T ss_dssp CCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG--
T ss_pred ceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC--
Confidence 335799999999998777654 356889999887755555441 0112344555544444444432100
Q ss_pred CCCCeEEEEeCCCCcEEEEeecC------------------------------CceEEEEEeCCe--EEEEEC--CeEEE
Q 022387 153 YPLNKVMIWDDHQSRCIGELSFR------------------------------SEVRSVKLRRDR--IIVVLE--QKIFV 198 (298)
Q Consensus 153 ~~d~~v~iWD~~~~~~~~~~~~~------------------------------~~v~~v~~~~~~--l~v~~~--~~I~i 198 (298)
.++.|.+||..+++..+.+..+ ..+..++++++. +.++.. ..|..
T Consensus 143 -~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~ 221 (343)
T 2qe8_A 143 -DKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYR 221 (343)
T ss_dssp -GGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEE
T ss_pred -CCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEE
Confidence 2478999999887765544220 113557777653 444432 34444
Q ss_pred EEcC---CCe-----EEE--EEeccCCCcceEEEEeCCCCeEEEEecCCCceEEEEEcCCcceEeecc--cccceeEEEE
Q 022387 199 YNFA---DLK-----LLH--QIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMA--HDSRIACFAL 266 (298)
Q Consensus 199 wd~~---~~~-----~i~--~~~~~~~~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~~~~~~~~--H~~~V~~l~f 266 (298)
++.. +.. ... ....+......+++ ++++.+++ +...++.|.+|+.....+..+.. +...+++|+|
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~--d~~G~l~v-a~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~ 298 (343)
T 2qe8_A 222 IKSADLSNLQLTDAELGSKIERYSEKPICDGISI--DKDHNIYV-GDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNF 298 (343)
T ss_dssp EEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEE--CTTCCEEE-EEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEE
T ss_pred EEHHHhcCCCCChhhhhcceEecccCCCCceEEE--CCCCCEEE-EccCCCeEEEEECCCCCEEEEEECCceecCCeeEE
Confidence 4431 110 000 01111111223444 44556666 37778899999983333433322 2456999999
Q ss_pred CCCCCEEEEEeCCCC
Q 022387 267 TQDGQLLATSSTKGT 281 (298)
Q Consensus 267 spdg~~lAt~S~Dgt 281 (298)
.++|+++++.+..+.
T Consensus 299 ~~~g~l~v~~~~~~~ 313 (343)
T 2qe8_A 299 GSDGYLYFDCNQLHH 313 (343)
T ss_dssp CTTSCEEEEECCGGG
T ss_pred CCCCcEEEEeCcccc
Confidence 999999999876554
No 237
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.24 E-value=0.00019 Score=65.96 Aligned_cols=188 Identities=10% Similarity=-0.011 Sum_probs=120.1
Q ss_pred CCCCEEEEEcC------CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCC---CCCCCeEEEEeCCC
Q 022387 95 QDHGCFAAGTD------HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDP---QYPLNKVMIWDDHQ 165 (298)
Q Consensus 95 ~dg~~lasgs~------~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~d~~v~iWD~~~ 165 (298)
+|++++++... +.+.++|..+.+.+.+... ...- .+.+++++..++++...... .-.++.|.++|..+
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~v--G~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t 158 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDG--GFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT 158 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEE--CSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEEC--CCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC
Confidence 46665554433 3577999999988777765 3333 68889999888776520000 00246899999999
Q ss_pred CcEEEEeecC--------CceEEEEEeC--CeEEEEE---CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEE
Q 022387 166 SRCIGELSFR--------SEVRSVKLRR--DRIIVVL---EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLV 232 (298)
Q Consensus 166 ~~~~~~~~~~--------~~v~~v~~~~--~~l~v~~---~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la 232 (298)
++.+.++... .....+.+++ ++++++. ++.|.++|+.+.+.+.++.... +..+.+++...+++
T Consensus 159 ~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g----~~~~~p~g~~~~v~ 234 (426)
T 3c75_H 159 FLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD----CYHIFPASPTVFYM 234 (426)
T ss_dssp CCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS----EEEEEEEETTEEEE
T ss_pred CcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC----ceeeccCCCcEEEE
Confidence 9998887653 2234566765 4667664 3689999999999999988532 23444444445555
Q ss_pred EecCCCceEEEEEcCCcceE-----eecccccc-eeEEEECCCCCEEEEEeCCCCEEEEEECCCCc
Q 022387 233 CPGLQKGQVRVEHYASKRTK-----FIMAHDSR-IACFALTQDGQLLATSSTKGTLVRIFNTLDGT 292 (298)
Q Consensus 233 ~sGs~dg~v~i~~~~~~~~~-----~~~~H~~~-V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~ 292 (298)
. +.||.+.+.+.....+. .+.....+ ...+.|+++|..++-.+..++ |.+.|+.+++
T Consensus 235 ~--~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~-V~ViD~~~~~ 297 (426)
T 3c75_H 235 N--CRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGK-IFQADLTAEG 297 (426)
T ss_dssp E--ETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSE-EEEEEECSSC
T ss_pred E--cCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCc-EEEEeccCCc
Confidence 3 45676666554433322 11111122 234678999988777788887 9999986543
No 238
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.23 E-value=0.0003 Score=64.78 Aligned_cols=187 Identities=13% Similarity=0.163 Sum_probs=108.0
Q ss_pred EEEEEcCCCCEEEEEcC-------CeEEEEEcCCCceEEEEeeecCCc--eE-EEEEecCCCEEEEEeCC--------CC
Q 022387 89 LHISFNQDHGCFAAGTD-------HGFRIYNCDPFREIFRRDFERGGG--IG-VVEMLFRCNILALVGGG--------PD 150 (298)
Q Consensus 89 ~~v~fs~dg~~lasgs~-------~gi~vw~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~--------~~ 150 (298)
..+...||| ++++... +++.++|.++.+.+.+++.. .+. +. -+-+.++.+.++++..+ .+
T Consensus 141 h~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~-~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~ 218 (462)
T 2ece_A 141 HTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEID-RGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLK 218 (462)
T ss_dssp EEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSB-CTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCC
T ss_pred cceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccC-CCCccccceEEECCCCCEEEEccCcCccccccccc
Confidence 345678999 5554433 36889999998887666531 111 11 13446777766666422 00
Q ss_pred CC----CCCCeEEEEeCCCCcEEEEeecC---CceEEEEE--eCC--eEEEE-------ECCeEEEEEcCCCe--EEEEE
Q 022387 151 PQ----YPLNKVMIWDDHQSRCIGELSFR---SEVRSVKL--RRD--RIIVV-------LEQKIFVYNFADLK--LLHQI 210 (298)
Q Consensus 151 ~~----~~d~~v~iWD~~~~~~~~~~~~~---~~v~~v~~--~~~--~l~v~-------~~~~I~iwd~~~~~--~i~~~ 210 (298)
.. ....+|.+||+.+++.+.++... .....+.| +++ ...++ .+++|.+|...+++ .++.+
T Consensus 219 ~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vI 298 (462)
T 2ece_A 219 LEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVI 298 (462)
T ss_dssp TTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEE
T ss_pred hhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEE
Confidence 00 02588999999999888888774 23444555 664 33333 23577776554332 22222
Q ss_pred eccCC----------------CcceEEEEeCCCCeEEEEecCCCceEEEEEcCCc----ceEeeccc-------------
Q 022387 211 ETIAN----------------PKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASK----RTKFIMAH------------- 257 (298)
Q Consensus 211 ~~~~~----------------~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~----~~~~~~~H------------- 257 (298)
..... ......+..++|+.+|-++....+.|.++++... .+..+...
T Consensus 299 di~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~ 378 (462)
T 2ece_A 299 EIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHK 378 (462)
T ss_dssp EECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCC
T ss_pred eCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeecccccccccc
Confidence 11110 1122334444455766666777899999987521 12222211
Q ss_pred -ccceeEEEECCCCCEEEEEe
Q 022387 258 -DSRIACFALTQDGQLLATSS 277 (298)
Q Consensus 258 -~~~V~~l~fspdg~~lAt~S 277 (298)
.+..+.++++|||++|..+.
T Consensus 379 ~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 379 LTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCSCCCCEEECTTSSEEEEEC
T ss_pred CCCCCCEEEEcCCCCEEEEEc
Confidence 01369999999999888887
No 239
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.22 E-value=0.0018 Score=54.85 Aligned_cols=199 Identities=5% Similarity=-0.122 Sum_probs=114.3
Q ss_pred CeEEEEEcCCCCEEEEEc-C-CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCC
Q 022387 87 TLLHISFNQDHGCFAAGT-D-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (298)
Q Consensus 87 ~V~~v~fs~dg~~lasgs-~-~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~ 164 (298)
.+.+++|++++..|..+. . +.|.+++.+.......... .......+.+......+.++.. ..+.|.++|..
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~-~~~~p~~ia~d~~~~~lyv~d~------~~~~I~~~~~~ 109 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQ-DLGSPEGIALDHLGRTIFWTDS------QLDRIEVAKMD 109 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECT-TCCCEEEEEEETTTTEEEEEET------TTTEEEEEETT
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEEC-CCCCccEEEEEecCCeEEEEEC------CCCEEEEEEcC
Confidence 567999999776655544 3 4577888876543222211 1134566667766666666553 34789999986
Q ss_pred CCcEEEEeecC-CceEEEEEeC--CeEEEEEC----CeEEEEEcCCCeEEEEEe-ccCCCcceEEEEeCCCCeEEEEecC
Q 022387 165 QSRCIGELSFR-SEVRSVKLRR--DRIIVVLE----QKIFVYNFADLKLLHQIE-TIANPKGLCAVSQGVGSLVLVCPGL 236 (298)
Q Consensus 165 ~~~~~~~~~~~-~~v~~v~~~~--~~l~v~~~----~~I~iwd~~~~~~i~~~~-~~~~~~~~~~~s~~~d~~~la~sGs 236 (298)
.......+... .....+++++ ..+.++.. +.|..+++... ....+. ........++++++.+ .+++ +..
T Consensus 110 g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~-~~~~~~~~~~~~P~gia~d~~~~-~lyv-~d~ 186 (267)
T 1npe_A 110 GTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT-NRRILAQDNLGLPNGLTFDAFSS-QLCW-VDA 186 (267)
T ss_dssp SCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC-CCEEEECTTCSCEEEEEEETTTT-EEEE-EET
T ss_pred CCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC-CcEEEEECCCCCCcEEEEcCCCC-EEEE-EEC
Confidence 54322222222 3467788876 45666542 47888887432 223332 1111122344544332 3333 366
Q ss_pred CCceEEEEEcCCcceEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 237 QKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 237 ~dg~v~i~~~~~~~~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
..+.|.+.+........+.........|++. ++.++++....+. |.++|..+|+.++++
T Consensus 187 ~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d-~~~lyva~~~~~~-v~~~d~~~g~~~~~i 245 (267)
T 1npe_A 187 GTHRAECLNPAQPGRRKVLEGLQYPFAVTSY-GKNLYYTDWKTNS-VIAMDLAISKEMDTF 245 (267)
T ss_dssp TTTEEEEEETTEEEEEEEEECCCSEEEEEEE-TTEEEEEETTTTE-EEEEETTTTEEEEEE
T ss_pred CCCEEEEEecCCCceEEEecCCCCceEEEEe-CCEEEEEECCCCe-EEEEeCCCCCceEEE
Confidence 7788988888755433322222345677765 4556665555667 999999999987764
No 240
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.19 E-value=7.6e-05 Score=64.95 Aligned_cols=181 Identities=10% Similarity=-0.022 Sum_probs=111.2
Q ss_pred CCCEEEEEc-CCeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCCcEEEEeec
Q 022387 96 DHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSF 174 (298)
Q Consensus 96 dg~~lasgs-~~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~~~~~~~~ 174 (298)
++ .|..|+ ++++..++.+ ++....... ....+.......++. +.+++ .++.|..+|.. ++.+..+..
T Consensus 107 ~~-~l~v~t~~~~l~~~d~~-g~~~~~~~~-~~~~~~~~~~~~~g~-l~vgt-------~~~~l~~~d~~-g~~~~~~~~ 174 (330)
T 3hxj_A 107 ED-ILYVTSMDGHLYAINTD-GTEKWRFKT-KKAIYATPIVSEDGT-IYVGS-------NDNYLYAINPD-GTEKWRFKT 174 (330)
T ss_dssp TT-EEEEECTTSEEEEECTT-SCEEEEEEC-SSCCCSCCEECTTSC-EEEEC-------TTSEEEEECTT-SCEEEEEEC
T ss_pred CC-EEEEEecCCEEEEEcCC-CCEEEEEcC-CCceeeeeEEcCCCE-EEEEc-------CCCEEEEECCC-CCEeEEEec
Confidence 44 455565 4678888877 555554443 122222222232333 44444 35789999998 777666655
Q ss_pred CC-ceEEEEEe-CCeEEEEECCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEecCCCceEEEEEcCCcceE
Q 022387 175 RS-EVRSVKLR-RDRIIVVLEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTK 252 (298)
Q Consensus 175 ~~-~v~~v~~~-~~~l~v~~~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~~~~ 252 (298)
.. .+.++... ...+.+++ +.|..|| .+++.+.++......+..+.+ ++++.+.+ |+.++.|..++.+.+...
T Consensus 175 ~~~~~~~~~~d~~g~l~v~t-~~l~~~d-~~g~~~~~~~~~~~~~~~~~~--~~~g~l~v--~t~~~gl~~~~~~g~~~~ 248 (330)
T 3hxj_A 175 NDAITSAASIGKDGTIYFGS-DKVYAIN-PDGTEKWNFYAGYWTVTRPAI--SEDGTIYV--TSLDGHLYAINPDGTEKW 248 (330)
T ss_dssp SSCCCSCCEECTTCCEEEES-SSEEEEC-TTSCEEEEECCSSCCCSCCEE--CTTSCEEE--EETTTEEEEECTTSCEEE
T ss_pred CCCceeeeEEcCCCEEEEEe-CEEEEEC-CCCcEEEEEccCCcceeceEE--CCCCeEEE--EcCCCeEEEECCCCCEeE
Confidence 43 45556664 45666667 8999999 777777666654444444444 44556665 466666777676555555
Q ss_pred eecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 253 FIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 253 ~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
.+......+.++.+.++|.+. .++.+|. |..+|. +|+.+.++
T Consensus 249 ~~~~~~~~~~~~~~~~~g~l~-v~t~~gg-l~~~d~-~g~~~~~~ 290 (330)
T 3hxj_A 249 RFKTGKRIESSPVIGNTDTIY-FGSYDGH-LYAINP-DGTEKWNF 290 (330)
T ss_dssp EEECSSCCCSCCEECTTSCEE-EECTTCE-EEEECT-TSCEEEEE
T ss_pred EeeCCCCccccceEcCCCeEE-EecCCCC-EEEECC-CCcEEEEE
Confidence 555555556677777777655 4566888 889995 78776554
No 241
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.18 E-value=8.6e-05 Score=72.45 Aligned_cols=57 Identities=18% Similarity=0.231 Sum_probs=45.5
Q ss_pred ceEEEEEcCCcceE-eecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 239 GQVRVEHYASKRTK-FIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 239 g~v~i~~~~~~~~~-~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
|.|..||..+.++. .+. +..++....+..+|.+++.++.||. +++||.++|+++++|
T Consensus 457 g~l~A~D~~tG~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~-l~a~D~~tG~~lw~~ 514 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGR-LVAYHAATGEKLWEA 514 (677)
T ss_dssp EEEEEEETTTTEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSE-EEEEETTTCCEEEEE
T ss_pred cEEEEEeCCCCcEEeecC-CCCCCcCcceEeCCCEEEEECCCCc-EEEEECCCCceeeee
Confidence 77888998877654 433 4455666677778888888999999 999999999999876
No 242
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.17 E-value=0.00017 Score=62.66 Aligned_cols=185 Identities=13% Similarity=0.069 Sum_probs=112.2
Q ss_pred CeEEEEEcCCCCEEEEEcCCeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCC
Q 022387 87 TLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQS 166 (298)
Q Consensus 87 ~V~~v~fs~dg~~lasgs~~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~ 166 (298)
.+.++...++|.+++...++++..|+.+ ++....... ....+..+....++. +. ++ . +.|..+| .++
T Consensus 138 ~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~~~~~-~~~~~~~~~~d~~g~-l~-v~-------t-~~l~~~d-~~g 204 (330)
T 3hxj_A 138 IYATPIVSEDGTIYVGSNDNYLYAINPD-GTEKWRFKT-NDAITSAASIGKDGT-IY-FG-------S-DKVYAIN-PDG 204 (330)
T ss_dssp CCSCCEECTTSCEEEECTTSEEEEECTT-SCEEEEEEC-SSCCCSCCEECTTCC-EE-EE-------S-SSEEEEC-TTS
T ss_pred eeeeeEEcCCCEEEEEcCCCEEEEECCC-CCEeEEEec-CCCceeeeEEcCCCE-EE-EE-------e-CEEEEEC-CCC
Confidence 3455666778875554444778888887 555544443 122222222323333 22 33 2 4588999 676
Q ss_pred cEEEEeecC-CceEEEEEeCC-eEEEEEC-CeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEecCCCceEEE
Q 022387 167 RCIGELSFR-SEVRSVKLRRD-RIIVVLE-QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRV 243 (298)
Q Consensus 167 ~~~~~~~~~-~~v~~v~~~~~-~l~v~~~-~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs~dg~v~i 243 (298)
+.+...... ..+.++...++ .+.+++. +.|..+|. +++.+..+.........+.+ +.++.+.+ |+.+|.|..
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~--~~~g~l~v--~t~~ggl~~ 279 (330)
T 3hxj_A 205 TEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVI--GNTDTIYF--GSYDGHLYA 279 (330)
T ss_dssp CEEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEE--CTTSCEEE--ECTTCEEEE
T ss_pred cEEEEEccCCcceeceEECCCCeEEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceE--cCCCeEEE--ecCCCCEEE
Confidence 666555543 35667777765 6777764 78888874 56666666654333333333 44455555 677877777
Q ss_pred EEcCCcceEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCC
Q 022387 244 EHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDG 291 (298)
Q Consensus 244 ~~~~~~~~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg 291 (298)
++.+.+....+......+.++...++|++++ ++.+|. +++...+..
T Consensus 280 ~d~~g~~~~~~~~~~~~~~~~~~d~~g~l~~-gt~~G~-~~~~~~~~~ 325 (330)
T 3hxj_A 280 INPDGTEKWNFETGSWIIATPVIDENGTIYF-GTRNGK-FYALFNLEH 325 (330)
T ss_dssp ECTTSCEEEEEECSSCCCSCCEECTTCCEEE-ECTTSC-EEEEEC---
T ss_pred ECCCCcEEEEEEcCCccccceEEcCCCEEEE-EcCCCe-EEEEecccc
Confidence 7765444445554566788999989998766 667998 888776543
No 243
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.16 E-value=0.00085 Score=61.29 Aligned_cols=141 Identities=12% Similarity=0.171 Sum_probs=103.7
Q ss_pred CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCCcEEEEeecCCceEEEEE-e
Q 022387 106 HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKL-R 184 (298)
Q Consensus 106 ~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~~~~~~~~~~~v~~v~~-~ 184 (298)
..+.|.|+.......++.. ..+-. -+.+....+|+-.+ +++.|+|+++.+.+..+.+...|.-+.| +
T Consensus 48 ~~vvIiDl~~~~~~~rrpi--~AdsA--IMnP~~~iiALrag--------~~lQiFnle~K~klks~~~~e~VvfWkWis 115 (494)
T 1bpo_A 48 AQVVIIDMNDPSNPIRRPI--SADSA--IMNPASKVIALKAG--------KTLQIFNIEMKSKMKAHTMTDDVTFWKWIS 115 (494)
T ss_dssp CEEEEEETTSTTSCEEEEC--CCSEE--EECSSSSCEEEEET--------TEEEEEETTTTEEEEEEECSSCCCEEEEEE
T ss_pred CeEEEEECCCCCcceeccc--cccee--eeCCCCcEEEEecC--------CeEEEEchHHhhhhcceecCCCceEEEecC
Confidence 4578999988776666664 33333 35667777887662 7899999999999999999999988887 6
Q ss_pred CCeEEEEECCeEEEEEcC-CCeEEEEEeccCC--CcceEEEEeCCCCeEEEEecC------CCceEEEEEcCCcceEeec
Q 022387 185 RDRIIVVLEQKIFVYNFA-DLKLLHQIETIAN--PKGLCAVSQGVGSLVLVCPGL------QKGQVRVEHYASKRTKFIM 255 (298)
Q Consensus 185 ~~~l~v~~~~~I~iwd~~-~~~~i~~~~~~~~--~~~~~~~s~~~d~~~la~sGs------~dg~v~i~~~~~~~~~~~~ 255 (298)
++.+.++++..|+-|++. +..+.+.|..|.. ...++.+..+++..+++..|- ..|.+.+|..+.+....+.
T Consensus 116 ~~~l~lVT~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ie 195 (494)
T 1bpo_A 116 LNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIE 195 (494)
T ss_dssp TTEEEEECSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEEC
T ss_pred CCeEEEEcCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchhe
Confidence 788889999999999995 4567777776653 345667777888777776553 4577888887665544555
Q ss_pred ccc
Q 022387 256 AHD 258 (298)
Q Consensus 256 ~H~ 258 (298)
+|.
T Consensus 196 Gha 198 (494)
T 1bpo_A 196 GHA 198 (494)
T ss_dssp CSE
T ss_pred eee
Confidence 554
No 244
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.15 E-value=0.00013 Score=71.07 Aligned_cols=188 Identities=7% Similarity=0.061 Sum_probs=112.8
Q ss_pred CEEEEEcC-CeEEEEEcCCCceEEEEeeecCCc---------eEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCCc
Q 022387 98 GCFAAGTD-HGFRIYNCDPFREIFRRDFERGGG---------IGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSR 167 (298)
Q Consensus 98 ~~lasgs~-~gi~vw~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~ 167 (298)
..|.+++. +.+.-+|..+++.+++.... ... ............+++.+ .|+.|..+|..+++
T Consensus 78 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~-~~~~~~~~~~~~~~~~~~a~~~~~v~v~~-------~dg~l~alD~~tG~ 149 (677)
T 1kb0_A 78 GIMYVSASWSVVHAIDTRTGNRIWTYDPQ-IDRSTGFKGCCDVVNRGVALWKGKVYVGA-------WDGRLIALDAATGK 149 (677)
T ss_dssp TEEEEECGGGCEEEEETTTTEEEEEECCC-CCGGGGGGSSSCSCCCCCEEETTEEEEEC-------TTSEEEEEETTTCC
T ss_pred CEEEEECCCCeEEEEECCCCcEEEEEcCC-CCccccccccccCCCCCceEECCEEEEEc-------CCCEEEEEECCCCC
Confidence 34444443 45667788888877766541 110 00000111344555554 46899999999999
Q ss_pred EEEEeecC------CceE-EEEEeCCeEEEEE-------CCeEEEEEcCCCeEEEEEeccCCCc----------------
Q 022387 168 CIGELSFR------SEVR-SVKLRRDRIIVVL-------EQKIFVYNFADLKLLHQIETIANPK---------------- 217 (298)
Q Consensus 168 ~~~~~~~~------~~v~-~v~~~~~~l~v~~-------~~~I~iwd~~~~~~i~~~~~~~~~~---------------- 217 (298)
.+-++... ..+. ......+.+++.. ++.|+.||..+++.+.++.......
T Consensus 150 ~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w 229 (677)
T 1kb0_A 150 EVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTW 229 (677)
T ss_dssp EEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTS
T ss_pred EEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccc
Confidence 88777654 1121 1223455666654 4789999999999999887633211
Q ss_pred ----------------ceEEEEeCCCCeEEEEecCCCc-------------------eEEEEEcCCcceE-eec--ccc-
Q 022387 218 ----------------GLCAVSQGVGSLVLVCPGLQKG-------------------QVRVEHYASKRTK-FIM--AHD- 258 (298)
Q Consensus 218 ----------------~~~~~s~~~d~~~la~sGs~dg-------------------~v~i~~~~~~~~~-~~~--~H~- 258 (298)
...++.++ +.++.+ +..++ .|..+|.++.++. .+. .|.
T Consensus 230 ~~~g~~~~~~~g~~~w~~~~~d~~--~~~vy~-~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~ 306 (677)
T 1kb0_A 230 DPSGKWWEAGGGGTMWDSMTFDAE--LNTMYV-GTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDN 306 (677)
T ss_dssp CGGGCHHHHCEECCCCSCEEEETT--TTEEEE-ECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCC
T ss_pred cccCceeEeCCCcccccceeEcCC--CCEEEE-ECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcc
Confidence 12344443 334433 44443 4666887766543 332 232
Q ss_pred ------cceeEEEECCCC---CEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 259 ------SRIACFALTQDG---QLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 259 ------~~V~~l~fspdg---~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
....-+....+| +.++.++.+|. |.++|.++|+++.++
T Consensus 307 wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~-l~~lD~~tG~~l~~~ 353 (677)
T 1kb0_A 307 WDYTSTQPMILADIKIAGKPRKVILHAPKNGF-FFVLDRTNGKFISAK 353 (677)
T ss_dssp SCCCCCSCCEEEEEEETTEEEEEEEECCTTSE-EEEEETTTCCEEEEE
T ss_pred cccccCCCcEEEecccCCcEeeEEEEECCCCE-EEEEECCCCCEeccc
Confidence 223333444578 78999999999 999999999998653
No 245
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.07 E-value=0.00072 Score=64.31 Aligned_cols=191 Identities=13% Similarity=0.030 Sum_probs=118.7
Q ss_pred CCCCEEEEEcC--CeEEEEEcCCCceEEEEeeecCCceEEEEE-e-cCCCEEEEEeCCCC-----------CCCCCCeEE
Q 022387 95 QDHGCFAAGTD--HGFRIYNCDPFREIFRRDFERGGGIGVVEM-L-FRCNILALVGGGPD-----------PQYPLNKVM 159 (298)
Q Consensus 95 ~dg~~lasgs~--~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~-----------~~~~d~~v~ 159 (298)
+||++|.+... +.|.+.|+++.+.....++.-..+...+.+ . +++.++..++.... .-..++.+.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 39998877654 337899999988665444421344555555 4 67777766641110 001246799
Q ss_pred EEeCCCCcEEEEeecCCceEEEEEeC--CeEEEEEC---------------------------------------CeEEE
Q 022387 160 IWDDHQSRCIGELSFRSEVRSVKLRR--DRIIVVLE---------------------------------------QKIFV 198 (298)
Q Consensus 160 iWD~~~~~~~~~~~~~~~v~~v~~~~--~~l~v~~~---------------------------------------~~I~i 198 (298)
+.|..+.+.+.++......-.+.+++ +.++++.. +.|.+
T Consensus 179 vID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~V 258 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKV 258 (595)
T ss_dssp EEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEE
T ss_pred EEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEE
Confidence 99999988877765432222222322 22222220 34788
Q ss_pred EEcCC--CeE-EEEEeccCCCcceEEEEeCCCCeEEEEecCCCceEEEEEcCCcc------------eE-eeccccccee
Q 022387 199 YNFAD--LKL-LHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR------------TK-FIMAHDSRIA 262 (298)
Q Consensus 199 wd~~~--~~~-i~~~~~~~~~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~~------------~~-~~~~H~~~V~ 262 (298)
.|..+ ++. +..+.....+. .+.+++ |+.++.+++-.+..|.++|+.+.. +. .+ .-....+
T Consensus 259 ID~~~~~~~~~~~~Ipvg~~Ph-Gv~~sP--DGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v-~vG~gP~ 334 (595)
T 1fwx_A 259 VDGRKEASSLFTRYIPIANNPH-GCNMAP--DKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP-ELGLGPL 334 (595)
T ss_dssp EECSGGGCCSSEEEEEEESSCC-CEEECT--TSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC-BCCSCEE
T ss_pred EeCcccCCceeEEEEecCCCce-EEEEcC--CCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc-CCCCCcc
Confidence 88876 444 55666544433 445555 557777778889999999987542 11 11 1224589
Q ss_pred EEEECCCCCEEEEEeCCCCEEEEEECCC
Q 022387 263 CFALTQDGQLLATSSTKGTLVRIFNTLD 290 (298)
Q Consensus 263 ~l~fspdg~~lAt~S~Dgt~IrIWd~~t 290 (298)
.++|+|||....+.-.|++ |-+||+.+
T Consensus 335 h~aF~~dG~aY~t~~ldsq-V~kwdi~~ 361 (595)
T 1fwx_A 335 HTAFDGRGNAYTSLFLDSQ-VVKWNIED 361 (595)
T ss_dssp EEEECTTSEEEEEETTTTE-EEEEEHHH
T ss_pred eEEECCCCeEEEEEecCCc-EEEEEhhH
Confidence 9999999966667777888 99999987
No 246
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.06 E-value=0.00084 Score=65.55 Aligned_cols=58 Identities=17% Similarity=0.150 Sum_probs=44.9
Q ss_pred CceEEEEEcCCcceE-eecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 238 KGQVRVEHYASKRTK-FIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 238 dg~v~i~~~~~~~~~-~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
+|.|..||..+.++. .+..+ .++..-.+...|.+++.++.||. +++||.++|+++.++
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagglvf~gt~dg~-l~a~D~~tG~~lw~~ 512 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYV-TIFNGGTLSTAGNLVFEGSADGR-VIAYAADTGEKLWEQ 512 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSE-EEEEETTTCCEEEEE
T ss_pred ceeEEEEECCCCCeEeEccCC-CCccCccceECCCEEEEECCCCc-EEEEECCCCccceee
Confidence 478888999877654 54433 33444466677889999999999 999999999999876
No 247
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.04 E-value=0.00039 Score=67.96 Aligned_cols=187 Identities=13% Similarity=0.121 Sum_probs=110.7
Q ss_pred CCEEEEEcC-CeEEEEEcCCCceEEEEeeecCCc---------eEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCC
Q 022387 97 HGCFAAGTD-HGFRIYNCDPFREIFRRDFERGGG---------IGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQS 166 (298)
Q Consensus 97 g~~lasgs~-~gi~vw~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~ 166 (298)
+..|++++. +.+.-+|..+++.+++.... ... ............+++.+ .|+.|..+|.+++
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~v~v~~-------~dg~l~AlDa~TG 141 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQ-SDRHRAGEACCDAVNRGVAVWKGKVYVGV-------LDGRLEAIDAKTG 141 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCC-CCGGGGGGCTTCSCCCCCEEETTEEEEEC-------TTSEEEEEETTTC
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCC-CCccccccccccCCCCccEEECCEEEEEc-------cCCEEEEEECCCC
Confidence 444555544 45778888888887776541 110 00000011234555544 4789999999999
Q ss_pred cEEEEeecC-C-----ceE-EEEEeCCeEEEEE-------CCeEEEEEcCCCeEEEEEeccC-CCc--------------
Q 022387 167 RCIGELSFR-S-----EVR-SVKLRRDRIIVVL-------EQKIFVYNFADLKLLHQIETIA-NPK-------------- 217 (298)
Q Consensus 167 ~~~~~~~~~-~-----~v~-~v~~~~~~l~v~~-------~~~I~iwd~~~~~~i~~~~~~~-~~~-------------- 217 (298)
+.+-++... . .+. +-....+.+++.. ++.|+.||..+++.+.++.... .+.
T Consensus 142 ~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~ 221 (689)
T 1yiq_A 142 QRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKT 221 (689)
T ss_dssp CEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTT
T ss_pred CEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccc
Confidence 988766543 1 111 1122345555543 4689999999999998886421 110
Q ss_pred ----------------ceEEEEeCCCCeEEEEecCCCce-------------------EEEEEcCCcceE-eecc--cc-
Q 022387 218 ----------------GLCAVSQGVGSLVLVCPGLQKGQ-------------------VRVEHYASKRTK-FIMA--HD- 258 (298)
Q Consensus 218 ----------------~~~~~s~~~d~~~la~sGs~dg~-------------------v~i~~~~~~~~~-~~~~--H~- 258 (298)
...++. ++..++.+ ++.++. |..+|.++.++. .+.. |.
T Consensus 222 ~~g~~w~~~~~g~~~w~~~~~d--~~~~~vy~-~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~ 298 (689)
T 1yiq_A 222 WFGDAYVEQGGGGTAWDSFAYD--PELNLLYI-GVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDA 298 (689)
T ss_dssp CCSSTHHHHCEECCCCSCEEEE--TTTTEEEE-ECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCC
T ss_pred cCCceeeecCCCCccccceeEc--CCCCEEEE-eCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCccc
Confidence 123444 33344443 666653 667888876644 4432 32
Q ss_pred ------cceeEEEECCCCC---EEEEEeCCCCEEEEEECCCCcEEE
Q 022387 259 ------SRIACFALTQDGQ---LLATSSTKGTLVRIFNTLDGTLLQ 295 (298)
Q Consensus 259 ------~~V~~l~fspdg~---~lAt~S~Dgt~IrIWd~~tg~~l~ 295 (298)
.++.......+|+ .++.++.+|. ++++|.++|+++.
T Consensus 299 wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~-l~~lD~~tG~~l~ 343 (689)
T 1yiq_A 299 WDYTATQHMILAELPIDGKPRKVLMQAPKNGF-FYVIDRATGELLS 343 (689)
T ss_dssp SCCCCCSCEEEEEEEETTEEEEEEEECCTTSE-EEEEETTTCCEEE
T ss_pred ccccCCCCcEEEeeccCCcEEEEEEEECCCCe-EEEEECCCCCEec
Confidence 1222223333665 8999999999 9999999999984
No 248
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.93 E-value=0.00052 Score=65.26 Aligned_cols=199 Identities=10% Similarity=0.072 Sum_probs=127.8
Q ss_pred CCeEEEEE-c-CCCCEEEEEcC------------------Ce-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEE
Q 022387 86 PTLLHISF-N-QDHGCFAAGTD------------------HG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILAL 144 (298)
Q Consensus 86 ~~V~~v~f-s-~dg~~lasgs~------------------~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (298)
.....+++ + |+++++.++++ ++ +-+.|.++.+....... .+....+.+++++..+++
T Consensus 134 ~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~V--gg~pd~~~~spdGk~~~v 211 (595)
T 1fwx_A 134 KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLV--SGNLDNCDADYEGKWAFS 211 (595)
T ss_dssp CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEE--SSCCCCEEECSSSSEEEE
T ss_pred CCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEe--CCCccceEECCCCCEEEE
Confidence 46788898 5 99999998852 23 55889999887777664 345566777788777766
Q ss_pred EeCCCCCC-------------------------------CCCCeEEEEeCCC--CcE-EEEeecCCceEEEEEeCCe--E
Q 022387 145 VGGGPDPQ-------------------------------YPLNKVMIWDDHQ--SRC-IGELSFRSEVRSVKLRRDR--I 188 (298)
Q Consensus 145 ~~~~~~~~-------------------------------~~d~~v~iWD~~~--~~~-~~~~~~~~~v~~v~~~~~~--l 188 (298)
.+-..... ..-+.|.|.|..+ +.. +..+.......++.++++. +
T Consensus 212 t~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v 291 (595)
T 1fwx_A 212 TSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHL 291 (595)
T ss_dssp EESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEE
T ss_pred EecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEE
Confidence 66332110 0013588899888 555 6677766677788888753 4
Q ss_pred EEEE--CCeEEEEEcCCCe------------EEEEEeccCCCcceEEEEeCCCCeEEEEecCCCceEEEEEcCC------
Q 022387 189 IVVL--EQKIFVYNFADLK------------LLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYAS------ 248 (298)
Q Consensus 189 ~v~~--~~~I~iwd~~~~~------------~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~------ 248 (298)
+++. +++|.++|+.+.+ .+.++.... +-..+.+++++...+ +-.-++.|.+|++..
T Consensus 292 ~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~---gP~h~aF~~dG~aY~-t~~ldsqV~kwdi~~a~~~~~ 367 (595)
T 1fwx_A 292 CVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGL---GPLHTAFDGRGNAYT-SLFLDSQVVKWNIEDAIRAYA 367 (595)
T ss_dssp EEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCS---CEEEEEECTTSEEEE-EETTTTEEEEEEHHHHHHHHH
T ss_pred EEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCC---CcceEEECCCCeEEE-EEecCCcEEEEEhhHhhhhhc
Confidence 4443 3799999998653 333333322 233444555664333 468899999999865
Q ss_pred ----cc-eEeecccccc-----eeEEEECCCCCEEEEEeC---CCCEE-----------EEEECCCCc
Q 022387 249 ----KR-TKFIMAHDSR-----IACFALTQDGQLLATSST---KGTLV-----------RIFNTLDGT 292 (298)
Q Consensus 249 ----~~-~~~~~~H~~~-----V~~l~fspdg~~lAt~S~---Dgt~I-----------rIWd~~tg~ 292 (298)
.+ +..+..|-.+ -..+.++|||++|.++.. |+ + .|+|+..++
T Consensus 368 g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr--~~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 368 GEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDR--FLNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp TCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTS--SCCCCSSCCEEEEEEECSSSS
T ss_pred ccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccc--cccCCCCCCCcceEEEcCCCc
Confidence 22 2244444332 234467899999999832 43 4 789997655
No 249
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.89 E-value=0.0068 Score=52.80 Aligned_cols=197 Identities=11% Similarity=0.054 Sum_probs=106.1
Q ss_pred eEEEEEcCCCCEEEEEcC-CeEEEEEcCCCceEEEEeee------------------cCCceEEEEEecCCCEEEEEeCC
Q 022387 88 LLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFE------------------RGGGIGVVEMLFRCNILALVGGG 148 (298)
Q Consensus 88 V~~v~fs~dg~~lasgs~-~gi~vw~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~ 148 (298)
..+++|.++|+++.++.. +++..|+.+..+........ ..+....+.+..+...+.++..
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~- 99 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDC- 99 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEET-
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEEC-
Confidence 346889999996667765 55777876654332111000 0012344555542344555542
Q ss_pred CCCCCCCCeEEEEeCCCCcEEEEee-cC----CceEEEEEeC-C-eEEEEEC-------------------CeEEEEEcC
Q 022387 149 PDPQYPLNKVMIWDDHQSRCIGELS-FR----SEVRSVKLRR-D-RIIVVLE-------------------QKIFVYNFA 202 (298)
Q Consensus 149 ~~~~~~d~~v~iWD~~~~~~~~~~~-~~----~~v~~v~~~~-~-~l~v~~~-------------------~~I~iwd~~ 202 (298)
.+.|..+|..++....... .. .....+.+.+ + .+.++.. +.|..||..
T Consensus 100 ------~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~ 173 (322)
T 2fp8_A 100 ------YYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPS 173 (322)
T ss_dssp ------TTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETT
T ss_pred ------CCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCC
Confidence 2448888876553211111 11 2356677776 4 4444431 468888876
Q ss_pred CCeEEEEEeccCCCcceEEEEeCCCCeEEEEecCCCceEEEEEcCCc---ceEeecccccceeEEEECCCCCEEEEEeC-
Q 022387 203 DLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASK---RTKFIMAHDSRIACFALTQDGQLLATSST- 278 (298)
Q Consensus 203 ~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~---~~~~~~~H~~~V~~l~fspdg~~lAt~S~- 278 (298)
+++..........+. -++++ +++..|.++-..++.|.+++.... ....+....+ ...|++.++|+++++...
T Consensus 174 ~~~~~~~~~~~~~p~-gia~~--~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~ 249 (322)
T 2fp8_A 174 TKETTLLLKELHVPG-GAEVS--ADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEE 249 (322)
T ss_dssp TTEEEEEEEEESCCC-EEEEC--TTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEE
T ss_pred CCEEEEeccCCccCc-ceEEC--CCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCc
Confidence 665432222222222 34444 444533333456678888877642 2222222223 788999999998888754
Q ss_pred ---------CCCEEEEEECCCCcEEEec
Q 022387 279 ---------KGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 279 ---------Dgt~IrIWd~~tg~~l~~~ 297 (298)
.+. |.++|. .|+.+..|
T Consensus 250 ~~~~~~~~~~~~-v~~~d~-~G~~~~~~ 275 (322)
T 2fp8_A 250 LDGNMHGRVDPK-GIKFDE-FGNILEVI 275 (322)
T ss_dssp TTSSTTSCEEEE-EEEECT-TSCEEEEE
T ss_pred ccccccCCCccE-EEEECC-CCCEEEEE
Confidence 355 777775 46666543
No 250
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.85 E-value=0.0077 Score=59.42 Aligned_cols=193 Identities=11% Similarity=0.141 Sum_probs=118.0
Q ss_pred eEEEEEcCCCCEEEEEcCCeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCCc
Q 022387 88 LLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSR 167 (298)
Q Consensus 88 V~~v~fs~dg~~lasgs~~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~ 167 (298)
|.++...++|.+.+....+|+..|+.++.+............+..+....++.+. +++ ..+.+.+||..+++
T Consensus 175 i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lw-igt-------~~~Gl~~~~~~~~~ 246 (795)
T 4a2l_A 175 IASTLYRQGDQIYIGTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIW-VAT-------EGAGLFLINPKTKE 246 (795)
T ss_dssp CEEEEEEETTEEEEEESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEE-EEE-------BSSCEEEEETTTTE
T ss_pred eEEEEECCCCCEEEEECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEE-EEE-------CCCCeEEEeCCCCe
Confidence 8888888888766644347888898776543221110012334444444444433 333 12348899988765
Q ss_pred EEEEeec--------CCceEEEEEeC-CeEEEEECCeEEEEEcCCCeEEEEEeccC------CCcceEEEEeCCCCeEEE
Q 022387 168 CIGELSF--------RSEVRSVKLRR-DRIIVVLEQKIFVYNFADLKLLHQIETIA------NPKGLCAVSQGVGSLVLV 232 (298)
Q Consensus 168 ~~~~~~~--------~~~v~~v~~~~-~~l~v~~~~~I~iwd~~~~~~i~~~~~~~------~~~~~~~~s~~~d~~~la 232 (298)
....... ...|.++...+ ..+.+++.+.|.+||..+.+. ..+.... ....+.++..+.++.+.+
T Consensus 247 ~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~Gl~~~~~~~~~~-~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWi 325 (795)
T 4a2l_A 247 IKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGTFNDLNIYHEGTDSF-ASYSSNPVENGSLSQRSVRSIFMDSQGGMWL 325 (795)
T ss_dssp EEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEESSCEEEEETTTTEE-EEECCCTTSTTSCSSSCEEEEEECTTSCEEE
T ss_pred EEEeecCCCCccccCCCeEEEEEEcCCCCEEEEeCChhheEcCCCCeE-EEEecCCCCCCCCCCCcEEEEEEeCCcCEEE
Confidence 4332111 23588888764 567777777899999876654 3333211 112355777777777776
Q ss_pred EecCCCceEEEEEcCCcceEeecc-------cccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcE
Q 022387 233 CPGLQKGQVRVEHYASKRTKFIMA-------HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTL 293 (298)
Q Consensus 233 ~sGs~dg~v~i~~~~~~~~~~~~~-------H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~ 293 (298)
|+.++-|.+++........+.. ....|.+|+..++|.+.+ |..++. |..||..+++.
T Consensus 326 --gt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWi-Gt~~~G-l~~~~~~~~~~ 389 (795)
T 4a2l_A 326 --GTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWI-GTNDGG-LNLYNPITQRF 389 (795)
T ss_dssp --EESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEE-EESSSC-EEEECTTTCCE
T ss_pred --EECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEE-EECCCC-eEEEcCCCCcE
Confidence 6776777777765544333221 235699999999998776 556777 88999887654
No 251
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.78 E-value=0.025 Score=55.78 Aligned_cols=193 Identities=12% Similarity=0.088 Sum_probs=117.4
Q ss_pred CCCeEEEEEcCCCCEEEEEcCCeEEEEEcCCCceEEEEe--------eecCCceEEEEEecCCCEEEEEeCCCCCCCCCC
Q 022387 85 PPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRD--------FERGGGIGVVEMLFRCNILALVGGGPDPQYPLN 156 (298)
Q Consensus 85 ~~~V~~v~fs~dg~~lasgs~~gi~vw~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 156 (298)
...|.++...++|.+.+...++|+..|+..+........ + ....+..+....+++.+-+++ .++
T Consensus 356 ~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l-~~~~v~~i~~d~~g~~lWigt-------~~~ 427 (795)
T 4a2l_A 356 DNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGI-GSNNIKAVYVDEKKSLVYIGT-------HAG 427 (795)
T ss_dssp CSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CC-SCSCEEEEEEETTTTEEEEEE-------TTT
T ss_pred CCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCC-CCccEEEEEEcCCCCEEEEEe-------CcC
Confidence 357999999999986654444689899877654322111 1 023344444444555244444 235
Q ss_pred eEEEEeCCCCcEEEEee-----cCCceEEEEEeC-CeEEEEECCeEEEEEcCCCeEEEEEecc-----CCCcceEEEEeC
Q 022387 157 KVMIWDDHQSRCIGELS-----FRSEVRSVKLRR-DRIIVVLEQKIFVYNFADLKLLHQIETI-----ANPKGLCAVSQG 225 (298)
Q Consensus 157 ~v~iWD~~~~~~~~~~~-----~~~~v~~v~~~~-~~l~v~~~~~I~iwd~~~~~~i~~~~~~-----~~~~~~~~~s~~ 225 (298)
.|.++|..+++...... ....|.++...+ ..+.+++.+.+.+||..+++.. .+... .....+.++..+
T Consensus 428 Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~i~~d 506 (795)
T 4a2l_A 428 GLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTLSALVRFNPEQRSFT-TIEKEKDGTPVVSKQITTLFRD 506 (795)
T ss_dssp EEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEESSCEEEEETTTTEEE-ECCBCTTCCBCCCCCEEEEEEC
T ss_pred ceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEecCceeEEeCCCCeEE-EccccccccccCCceEEEEEEC
Confidence 69999998876543221 123678887765 5677777778999998776542 22211 011234566677
Q ss_pred CCCeEEEEecCCCceEEEEEcCCcceEeec-------ccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcE
Q 022387 226 VGSLVLVCPGLQKGQVRVEHYASKRTKFIM-------AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTL 293 (298)
Q Consensus 226 ~d~~~la~sGs~dg~v~i~~~~~~~~~~~~-------~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~ 293 (298)
.++.+.+ |+.+| |..++...... .+. .+...|.+|...++|.+.++.. . . |..||..+++.
T Consensus 507 ~~g~lWi--gt~~G-l~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~-G-l~~~d~~~~~~ 574 (795)
T 4a2l_A 507 SHKRLWI--GGEEG-LSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-E-G-FYCFNEKDKQI 574 (795)
T ss_dssp TTCCEEE--EESSC-EEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-S-C-EEEEETTTTEE
T ss_pred CCCCEEE--EeCCc-eEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-C-C-ceeECCCCCcE
Confidence 7777776 34455 55555544433 221 2345799999999999777664 3 5 77899877643
No 252
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.76 E-value=0.014 Score=49.25 Aligned_cols=185 Identities=4% Similarity=-0.128 Sum_probs=103.4
Q ss_pred CCEEEEEcCCeEEEEEcCCCceE-----EEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCCcEEEE
Q 022387 97 HGCFAAGTDHGFRIYNCDPFREI-----FRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGE 171 (298)
Q Consensus 97 g~~lasgs~~gi~vw~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~~~~~ 171 (298)
|.+|..+..+.|+.++++..... ..... .......+.+......+.++.. ..+.|..+|...+.....
T Consensus 1 ~~~l~~~~~~~I~~~~~~g~~~~~~~~~~~~~~-~~~~~~gi~~d~~~~~ly~~d~------~~~~I~~~~~~g~~~~~~ 73 (267)
T 1npe_A 1 GTHLLFAQTGKIERLPLERNTMKKTEAKAFLHI-PAKVIIGLAFDCVDKVVYWTDI------SEPSIGRASLHGGEPTTI 73 (267)
T ss_dssp CEEEEEEEEEEEEEEEESSSCBCGGGCEEEEEE-EEEEEEEEEEETTTTEEEEEET------TTTEEEEEESSSCCCEEE
T ss_pred CcEEEEEcCCeEEEEEecCcccccccceeeecC-CCCcEEEEEEecCCCEEEEEEC------CCCEEEEEecCCCCcEEE
Confidence 34566555556777777654320 01111 1223456666666666666653 347899999876554333
Q ss_pred eecC-CceEEEEEeC--CeEEEEE--CCeEEEEEcCCCeEEEEEec-cCCCcceEEEEeCCCCeEEEEecCC--CceEEE
Q 022387 172 LSFR-SEVRSVKLRR--DRIIVVL--EQKIFVYNFADLKLLHQIET-IANPKGLCAVSQGVGSLVLVCPGLQ--KGQVRV 243 (298)
Q Consensus 172 ~~~~-~~v~~v~~~~--~~l~v~~--~~~I~iwd~~~~~~i~~~~~-~~~~~~~~~~s~~~d~~~la~sGs~--dg~v~i 243 (298)
+... .....+++++ ..+.++. .+.|.++++..... ..+.. ......-+++.++. +.++++ ... .+.|..
T Consensus 74 ~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-~~~~~~~~~~P~~i~vd~~~-g~lyv~-~~~~~~~~I~~ 150 (267)
T 1npe_A 74 IRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR-RVLFDTGLVNPRGIVTDPVR-GNLYWT-DWNRDNPKIET 150 (267)
T ss_dssp ECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSSEEEEEEETTT-TEEEEE-ECCSSSCEEEE
T ss_pred EECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE-EEEEECCCCCccEEEEeeCC-CEEEEE-ECCCCCcEEEE
Confidence 3222 3567788875 4566665 36899999854322 22222 11112234444432 344442 332 467877
Q ss_pred EEcCCcceEeec-ccccceeEEEECCCCCE-EEEEeCCCCEEEEEECCCCc
Q 022387 244 EHYASKRTKFIM-AHDSRIACFALTQDGQL-LATSSTKGTLVRIFNTLDGT 292 (298)
Q Consensus 244 ~~~~~~~~~~~~-~H~~~V~~l~fspdg~~-lAt~S~Dgt~IrIWd~~tg~ 292 (298)
.+.+......+. ..-...+.|++++++.. +++-...+. |.++|+..+.
T Consensus 151 ~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~-I~~~~~~g~~ 200 (267)
T 1npe_A 151 SHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHR-AECLNPAQPG 200 (267)
T ss_dssp EETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTE-EEEEETTEEE
T ss_pred EecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCE-EEEEecCCCc
Confidence 777654433332 23346899999998654 455555666 9999987543
No 253
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.66 E-value=0.0035 Score=60.95 Aligned_cols=184 Identities=15% Similarity=0.197 Sum_probs=108.4
Q ss_pred CEEEEEcC-CeEEEEEcCCCceEEEEeeecCCce-----------EEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCC
Q 022387 98 GCFAAGTD-HGFRIYNCDPFREIFRRDFERGGGI-----------GVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ 165 (298)
Q Consensus 98 ~~lasgs~-~gi~vw~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~ 165 (298)
..|.+++. ..+.-+|..+++.+++.... .... ....+ ....+++.+ .|+.|..+|..+
T Consensus 67 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~-------~dg~l~alD~~t 136 (668)
T 1kv9_A 67 GVIYTSMSWSRVIAVDAASGKELWRYDPE-VAKVKARTSCCDAVNRGVAL--WGDKVYVGT-------LDGRLIALDAKT 136 (668)
T ss_dssp TEEEEEEGGGEEEEEETTTCCEEEEECCC-CCGGGGGGCTTCSCCCCCEE--EBTEEEEEC-------TTSEEEEEETTT
T ss_pred CEEEEECCCCeEEEEECCCChhceEECCC-CCccccccccccCCccceEE--ECCEEEEEc-------CCCEEEEEECCC
Confidence 34444444 45667888888887766541 1100 00111 234455544 468999999999
Q ss_pred CcEEEEeecCC-----ceE-EEEEeCCeEEEEE-------CCeEEEEEcCCCeEEEEEeccC-CCc--------------
Q 022387 166 SRCIGELSFRS-----EVR-SVKLRRDRIIVVL-------EQKIFVYNFADLKLLHQIETIA-NPK-------------- 217 (298)
Q Consensus 166 ~~~~~~~~~~~-----~v~-~v~~~~~~l~v~~-------~~~I~iwd~~~~~~i~~~~~~~-~~~-------------- 217 (298)
++.+-++.... .+. .-....+.+++.. ++.|..+|..+++.+.++.... .+.
T Consensus 137 G~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~ 216 (668)
T 1kv9_A 137 GKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKT 216 (668)
T ss_dssp CCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTT
T ss_pred CCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCcccccccccccccc
Confidence 99887766521 111 1122345555543 3689999999999999887421 111
Q ss_pred ----------------ceEEEEeCCCCeEEEEecCCCce-------------------EEEEEcCCcceE-eec--ccc-
Q 022387 218 ----------------GLCAVSQGVGSLVLVCPGLQKGQ-------------------VRVEHYASKRTK-FIM--AHD- 258 (298)
Q Consensus 218 ----------------~~~~~s~~~d~~~la~sGs~dg~-------------------v~i~~~~~~~~~-~~~--~H~- 258 (298)
...++. ++..++.+ ++.++. |.-+|.++.++. .+. .|.
T Consensus 217 ~~g~~~w~~~~gg~~w~~~a~d--~~~~~vy~-~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~ 293 (668)
T 1kv9_A 217 WQGDQYWKLGGGGTVWDSMAYD--PELDLLYV-GTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDS 293 (668)
T ss_dssp CCSSCHHHHCEECCCCSCEEEE--TTTTEEEE-ECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCC
T ss_pred CCccceeeeCCCCccccceEEc--CCCCEEEE-eCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCcc
Confidence 012333 33334433 555553 666887776543 433 232
Q ss_pred ------cceeEEEECCCCC---EEEEEeCCCCEEEEEECCCCcEEE
Q 022387 259 ------SRIACFALTQDGQ---LLATSSTKGTLVRIFNTLDGTLLQ 295 (298)
Q Consensus 259 ------~~V~~l~fspdg~---~lAt~S~Dgt~IrIWd~~tg~~l~ 295 (298)
.++....+..+|+ +++.++.+|. +.++|..+|+++.
T Consensus 294 wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~-l~~lD~~tG~~l~ 338 (668)
T 1kv9_A 294 WDFTATQQITLAELNIDGKPRKVLMQAPKNGF-FYVLDRTNGKLIS 338 (668)
T ss_dssp SCCCCCSCEEEEEEEETTEEEEEEEECCTTSE-EEEEETTTCCEEE
T ss_pred ccccCCCCcEEEEeccCCcEEEEEEEECCCCE-EEEEECCCCCEec
Confidence 2333333334775 7899999999 9999999999884
No 254
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.65 E-value=0.002 Score=62.68 Aligned_cols=59 Identities=12% Similarity=0.127 Sum_probs=43.3
Q ss_pred CCceEEEEEcCCcceE-eecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 237 QKGQVRVEHYASKRTK-FIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 237 ~dg~v~i~~~~~~~~~-~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
.+|.|.-||..+.++. ....+ .++....+...|.++..++.|+. +++||.++|+++.++
T Consensus 436 ~~g~l~A~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~vf~g~~dg~-l~a~d~~tG~~l~~~ 495 (668)
T 1kv9_A 436 VSGALLAWDPVKQKAAWKVPYP-THWNGGTLSTAGNLVFQGTAAGQ-MHAYSADKGEALWQF 495 (668)
T ss_dssp CEEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSE-EEEEETTTCCEEEEE
T ss_pred ccceEEEEeCCCCcEEEEccCC-CCCcCceeEeCCCEEEEECCccc-chhhhhhcChhheEe
Confidence 4588888998776654 43322 33444445556788888999999 999999999999776
No 255
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.65 E-value=0.012 Score=55.98 Aligned_cols=59 Identities=19% Similarity=0.169 Sum_probs=39.9
Q ss_pred CCceEEEEEcCCcceE-eecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 237 QKGQVRVEHYASKRTK-FIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 237 ~dg~v~i~~~~~~~~~-~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
.+|.|..+|..+.++. .+. +...+....+...+.++..++.||. |+.||.++|+++.+|
T Consensus 442 ~~g~l~a~D~~tG~~~W~~~-~~~~~~~~~~~t~gg~v~~g~~dg~-l~a~D~~tG~~lw~~ 501 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWTKW-EKFAAWGGTLYTKGGLVWYATLDGY-LKALDNKDGKELWNF 501 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEE-ESSCCCSBCEEETTTEEEEECTTSE-EEEEETTTCCEEEEE
T ss_pred CCCeEEEEECCCCCEEEEec-CCCCccceeEEECCCEEEEEcCCCe-EEEEECCCCCEEEEE
Confidence 3578888888766543 433 2223333333334556666899999 999999999999876
No 256
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.64 E-value=0.0035 Score=56.41 Aligned_cols=94 Identities=9% Similarity=-0.115 Sum_probs=65.0
Q ss_pred eEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCC---CCCCCCeEEEEeCCCCcEEEEeecC--------
Q 022387 107 GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPD---PQYPLNKVMIWDDHQSRCIGELSFR-------- 175 (298)
Q Consensus 107 gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~d~~v~iWD~~~~~~~~~~~~~-------- 175 (298)
.+.|+|.++.+.+.+... ...- .+.+++++..++++..... ..-.+++|.+||..+++.+.++...
T Consensus 47 ~vsvID~~t~~v~~~i~v--G~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g 123 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLG--AFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVG 123 (368)
T ss_dssp EEEEEETTTTEEEEEEEE--CTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBS
T ss_pred eEEEEECCCCeEEEEEeC--CCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccC
Confidence 667999999988777765 3333 6888899888887752100 0002588999999999999998754
Q ss_pred CceEEEEEeCC--eEEEEE---CCeEEE--EEcCC
Q 022387 176 SEVRSVKLRRD--RIIVVL---EQKIFV--YNFAD 203 (298)
Q Consensus 176 ~~v~~v~~~~~--~l~v~~---~~~I~i--wd~~~ 203 (298)
.....+.++++ .++++. ++.|.+ +|+.+
T Consensus 124 ~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 124 PRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp CCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred CCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 23456677764 677765 357888 88765
No 257
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.53 E-value=0.017 Score=55.05 Aligned_cols=151 Identities=6% Similarity=-0.075 Sum_probs=83.9
Q ss_pred CCEEEEEcCC-eEEEEEcCCCceEEEEeeecCC----ceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCCcEEEE
Q 022387 97 HGCFAAGTDH-GFRIYNCDPFREIFRRDFERGG----GIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGE 171 (298)
Q Consensus 97 g~~lasgs~~-gi~vw~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~~~~~ 171 (298)
+..+++++.+ .+..+|..+++.+...... .. .+...-... ...+++...+.+. -.++.|..+|.++++.+-+
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~-~~~~~~~~~~~P~v~-~g~v~vg~~~~~~-~~~g~v~a~D~~tG~~~W~ 191 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVC-DPKVGSTLTQAPFVA-KDTVLMGCSGAEL-GVRGAVNAFDLKTGELKWR 191 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECC-CGGGTCBCCSCCEEE-TTEEEEECBCGGG-TCCCEEEEEETTTCCEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCC-CCCccceeccCCEEE-CCEEEEEecCCcc-CCCCEEEEEECCCCcEEEE
Confidence 4566666654 4778899999888776641 10 111100111 2344443321100 0268899999999998877
Q ss_pred eecCCce---------------------------------------EEEEEeC--CeEEEEEC-----------------
Q 022387 172 LSFRSEV---------------------------------------RSVKLRR--DRIIVVLE----------------- 193 (298)
Q Consensus 172 ~~~~~~v---------------------------------------~~v~~~~--~~l~v~~~----------------- 193 (298)
+...... ..+.+.+ +.+.+...
T Consensus 192 ~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~ 271 (571)
T 2ad6_A 192 AFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWT 271 (571)
T ss_dssp EESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTT
T ss_pred EccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeE
Confidence 6543211 1123333 34545442
Q ss_pred CeEEEEEcCCCeEEEEEeccCC------Cc-ceEEEEeCCCCe---EEEEecCCCceEEEEEcCCcce
Q 022387 194 QKIFVYNFADLKLLHQIETIAN------PK-GLCAVSQGVGSL---VLVCPGLQKGQVRVEHYASKRT 251 (298)
Q Consensus 194 ~~I~iwd~~~~~~i~~~~~~~~------~~-~~~~~s~~~d~~---~la~sGs~dg~v~i~~~~~~~~ 251 (298)
+.|..+|..+++.+..++...+ .. ..+.+....++. +++ .++.+|.+.+.|..+.++
T Consensus 272 ~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~-~~~~~G~l~~lD~~tG~~ 338 (571)
T 2ad6_A 272 MTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLS-HIDRNGILYTLNRENGNL 338 (571)
T ss_dssp TEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEE-EECTTSEEEEEETTTCCE
T ss_pred EEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEE-EeCCCcEEEEEECCCCCE
Confidence 2699999999999998875321 11 112222112343 344 378899999988776553
No 258
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.51 E-value=0.04 Score=47.80 Aligned_cols=200 Identities=11% Similarity=-0.003 Sum_probs=106.9
Q ss_pred CeEEEEEcC-CCCEEEEEcCCeEEEEEcCCCceEEEE-eee--cCCceEEEEEec-CCCEEEEEeCCCCC----------
Q 022387 87 TLLHISFNQ-DHGCFAAGTDHGFRIYNCDPFREIFRR-DFE--RGGGIGVVEMLF-RCNILALVGGGPDP---------- 151 (298)
Q Consensus 87 ~V~~v~fs~-dg~~lasgs~~gi~vw~~~~~~~~~~~-~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~---------- 151 (298)
.+.++++.+ +|+++++....++..++.+........ ... .......+.+.. +++..+.-.+....
T Consensus 81 ~p~gi~~~~~~g~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~ 160 (322)
T 2fp8_A 81 RTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDT 160 (322)
T ss_dssp CEEEEEEETTTTEEEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHH
T ss_pred CCceEEEcCCCCcEEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcc
Confidence 578999997 777666656677777776643321111 110 011234455555 55544433221000
Q ss_pred CCCCCeEEEEeCCCCcEEEEeecCCceEEEEEeCC--eEEEEE--CCeEEEEEcCCCe--EEEEEeccCCCcceEEEEeC
Q 022387 152 QYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRD--RIIVVL--EQKIFVYNFADLK--LLHQIETIANPKGLCAVSQG 225 (298)
Q Consensus 152 ~~~d~~v~iWD~~~~~~~~~~~~~~~v~~v~~~~~--~l~v~~--~~~I~iwd~~~~~--~i~~~~~~~~~~~~~~~s~~ 225 (298)
....+.|..+|..+++.............++++++ .+.++. .+.|.+|++.... ....+..... .-.+..+
T Consensus 161 ~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g---P~gi~~d 237 (322)
T 2fp8_A 161 SDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN---PGNIKRN 237 (322)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS---EEEEEEC
T ss_pred cCCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC---CCCeEEC
Confidence 00236788889877664332222233456788875 366664 3799999986421 1122221111 2234455
Q ss_pred CCCeEEEEecC---------CCceEEEEEcCCcceEeeccc----ccceeEEEECCCCCEEEEEeCCCCEEEEEECCCC
Q 022387 226 VGSLVLVCPGL---------QKGQVRVEHYASKRTKFIMAH----DSRIACFALTQDGQLLATSSTKGTLVRIFNTLDG 291 (298)
Q Consensus 226 ~d~~~la~sGs---------~dg~v~i~~~~~~~~~~~~~H----~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg 291 (298)
+++.+.++... ..+.|..++.+.+.+..+... -..++++++ .+|+++++....+. |.++++...
T Consensus 238 ~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~-i~~~~~~~~ 314 (322)
T 2fp8_A 238 ADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGS-VGILVYDKK 314 (322)
T ss_dssp TTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSE-EEEEEC---
T ss_pred CCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCc-eEEEecccc
Confidence 56565553211 135666677665544444433 245778877 47788877777777 999997643
No 259
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.48 E-value=0.0086 Score=57.88 Aligned_cols=201 Identities=10% Similarity=0.033 Sum_probs=103.7
Q ss_pred eEEEEEcCCCCEEEEEcC--CeEEEEEcCCCceEEEEeeecCCceEE-EEEecCCCEEEEEeCCCCCCCCCCeEEEEeCC
Q 022387 88 LLHISFNQDHGCFAAGTD--HGFRIYNCDPFREIFRRDFERGGGIGV-VEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (298)
Q Consensus 88 V~~v~fs~dg~~lasgs~--~gi~vw~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~ 164 (298)
..++++..+|++++.|+. ..+.+||..+.++.....+ ....... +....++..+++ +|..+....-+.+.+||..
T Consensus 245 ~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~-~~~R~~~s~~~~~dg~iyv~-GG~~~~~~~~~~~e~yd~~ 322 (656)
T 1k3i_A 245 CPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDM-QVARGYQSSATMSDGRVFTI-GGSWSGGVFEKNGEVYSPS 322 (656)
T ss_dssp SCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCC-SSCCSSCEEEECTTSCEEEE-CCCCCSSSCCCCEEEEETT
T ss_pred cccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCC-CccccccceEEecCCeEEEE-eCcccCCcccccceEeCCC
Confidence 345778899999999985 3478999887765433222 1222222 222335554444 4422111123679999998
Q ss_pred CCcEEEEe-----ecC-----------CceEEEEEeCCeEEE-EECCeEEEEEcCCCeEEEEEeccCC-------CcceE
Q 022387 165 QSRCIGEL-----SFR-----------SEVRSVKLRRDRIIV-VLEQKIFVYNFADLKLLHQIETIAN-------PKGLC 220 (298)
Q Consensus 165 ~~~~~~~~-----~~~-----------~~v~~v~~~~~~l~v-~~~~~I~iwd~~~~~~i~~~~~~~~-------~~~~~ 220 (298)
+++....- ... ..+..+.......+. .....+..||..+.+-......... .....
T Consensus 323 t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~ 402 (656)
T 1k3i_A 323 SKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGN 402 (656)
T ss_dssp TTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCE
T ss_pred CCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCc
Confidence 87643320 000 111111111111111 1135788999876654333322211 11122
Q ss_pred EEE-eCCCCeEEEEecCCCc-----------eEEEEEcCCcceEee---cccccc-eeEEEECCCCCEEEEEeCC-----
Q 022387 221 AVS-QGVGSLVLVCPGLQKG-----------QVRVEHYASKRTKFI---MAHDSR-IACFALTQDGQLLATSSTK----- 279 (298)
Q Consensus 221 ~~s-~~~d~~~la~sGs~dg-----------~v~i~~~~~~~~~~~---~~H~~~-V~~l~fspdg~~lAt~S~D----- 279 (298)
++. +..++.++++ |+.++ .|.+||.....-..+ ..+... -.+++..|+|++++.|+.+
T Consensus 403 av~~~~~~~~i~v~-GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~ 481 (656)
T 1k3i_A 403 AVMYDAVKGKILTF-GGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPF 481 (656)
T ss_dssp EEEEETTTTEEEEE-CCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTT
T ss_pred eEeccCCCCeEEEE-eCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCc
Confidence 222 1234577776 54322 455666655443322 122222 3455677999999999865
Q ss_pred ------CCEEEEEECCCCc
Q 022387 280 ------GTLVRIFNTLDGT 292 (298)
Q Consensus 280 ------gt~IrIWd~~tg~ 292 (298)
.. +.+||..+++
T Consensus 482 ~~~~~~~~-v~~ydp~t~~ 499 (656)
T 1k3i_A 482 EDSTPVFT-PEIYVPEQDT 499 (656)
T ss_dssp CCCSBCCC-CEEEEGGGTE
T ss_pred CCCCcccc-eEEEcCCCCc
Confidence 45 8999987764
No 260
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.32 E-value=0.021 Score=54.65 Aligned_cols=139 Identities=16% Similarity=0.209 Sum_probs=85.2
Q ss_pred CCCeEEEEeCCCCcEEEEeecCC-----ceEE-EEEeCCeEEEEE-------CCeEEEEEcCCCeEEEEEeccCCCc---
Q 022387 154 PLNKVMIWDDHQSRCIGELSFRS-----EVRS-VKLRRDRIIVVL-------EQKIFVYNFADLKLLHQIETIANPK--- 217 (298)
Q Consensus 154 ~d~~v~iWD~~~~~~~~~~~~~~-----~v~~-v~~~~~~l~v~~-------~~~I~iwd~~~~~~i~~~~~~~~~~--- 217 (298)
.|+.|.-+|..+++.+-+..... .+.+ -.+..+.+++.. ++.|+.+|..+++.+.++.......
T Consensus 129 ~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~ 208 (599)
T 1w6s_A 129 LDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLL 208 (599)
T ss_dssp TTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHT
T ss_pred CCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccc
Confidence 46889999999999877665432 2211 122345555544 4799999999999998887532110
Q ss_pred -----------------------------------ceEEEEeCCCCeEEEEecCCC----------------ceEEEEEc
Q 022387 218 -----------------------------------GLCAVSQGVGSLVLVCPGLQK----------------GQVRVEHY 246 (298)
Q Consensus 218 -----------------------------------~~~~~s~~~d~~~la~sGs~d----------------g~v~i~~~ 246 (298)
...++.... +.+++ |..+ +.|.-+|.
T Consensus 209 ~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~-g~vy~--g~g~~~p~~~~~r~gd~~y~~sv~Ald~ 285 (599)
T 1w6s_A 209 LASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGT-NLIYF--GTGNPAPWNETMRPGDNKWTMTIFGRDA 285 (599)
T ss_dssp BCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTT-TEEEE--ECCCCSCSCGGGSCSCCTTSSEEEEEET
T ss_pred cccccccccccccccccccccCCCcceecCCCccccceeEeCCC-CEEEE--eCCCCccccCcccCCCccccceEEEEeC
Confidence 012333322 23333 3333 35666777
Q ss_pred CCcceE-ee--cccc--------cceeEEEEC-CCC---CEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 247 ASKRTK-FI--MAHD--------SRIACFALT-QDG---QLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 247 ~~~~~~-~~--~~H~--------~~V~~l~fs-pdg---~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
++.++. .+ ..|. .++. +... .+| +.++.++.+|. +.++|.++|+++.++
T Consensus 286 ~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~-l~~lD~~tG~~lw~~ 349 (599)
T 1w6s_A 286 DTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGI-VYTLDRTDGALVSAN 349 (599)
T ss_dssp TTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSE-EEEEETTTCCEEEEE
T ss_pred CCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcE-EEEEECCCCCEeecc
Confidence 766544 33 2332 1221 2332 578 57888999998 999999999998653
No 261
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.26 E-value=0.077 Score=52.12 Aligned_cols=192 Identities=9% Similarity=0.029 Sum_probs=115.3
Q ss_pred CCCeEEEEEcCCCCEEEEEcCCeEEEEEcCCCceEEEEe--eecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEe
Q 022387 85 PPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRD--FERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWD 162 (298)
Q Consensus 85 ~~~V~~v~fs~dg~~lasgs~~gi~vw~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD 162 (298)
...|.++...++|.+.+....+|+..++..+.+...... + ....+..+....++. +-+++ . +.|..+|
T Consensus 406 ~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~-~~~~v~~i~~d~~g~-lwigt-------~-~Gl~~~~ 475 (781)
T 3v9f_A 406 SNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKN-ELLDVRVFYEDKNKK-IWIGT-------H-AGVFVID 475 (781)
T ss_dssp CSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEEECCSTTT-CCCCEEEEEECTTSE-EEEEE-------T-TEEEEEE
T ss_pred CcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEEeccCCC-CCCeEEEEEECCCCC-EEEEE-------C-CceEEEe
Confidence 357999998888886664334788888876654321110 0 123344444333333 33333 2 4588999
Q ss_pred CCCCcEEEEeec------CCceEEEEEeC-CeEEEEEC-CeEEEEEcCCCeEEEEEeccC--CCcceEEEEeCCCCeEEE
Q 022387 163 DHQSRCIGELSF------RSEVRSVKLRR-DRIIVVLE-QKIFVYNFADLKLLHQIETIA--NPKGLCAVSQGVGSLVLV 232 (298)
Q Consensus 163 ~~~~~~~~~~~~------~~~v~~v~~~~-~~l~v~~~-~~I~iwd~~~~~~i~~~~~~~--~~~~~~~~s~~~d~~~la 232 (298)
..+++....... ...|.++...+ ..+.+++. +.+..||..+.+ +..+.... ....+.++..+.++.+.+
T Consensus 476 ~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~-~~~~~~~~~l~~~~i~~i~~d~~g~lWi 554 (781)
T 3v9f_A 476 LASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQL-VRKFNQYEGFCSNTINQIYRSSKGQMWL 554 (781)
T ss_dssp SSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCE-EEEECTTTTCSCSCEEEEEECTTSCEEE
T ss_pred CCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCe-EEEccCCCCCCCCeeEEEEECCCCCEEE
Confidence 887654332221 24678887765 46777775 678889876654 33443211 112355677777777776
Q ss_pred EecCCCceEEEEEcCCcceEeeccc----ccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCc
Q 022387 233 CPGLQKGQVRVEHYASKRTKFIMAH----DSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGT 292 (298)
Q Consensus 233 ~sGs~dg~v~i~~~~~~~~~~~~~H----~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~ 292 (298)
|+.+|.|..++.+.+....+... ...|.++...++|.+.+++ ++. |..||..+++
T Consensus 555 --~T~~Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t--~~G-l~~~~~~~~~ 613 (781)
T 3v9f_A 555 --ATGEGLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWAST--NTG-ISCYITSKKC 613 (781)
T ss_dssp --EETTEEEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEEC--SSC-EEEEETTTTE
T ss_pred --EECCCceEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEEc--CCc-eEEEECCCCc
Confidence 35577757777766655544322 2368999999999988876 334 5677776554
No 262
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.26 E-value=0.11 Score=51.13 Aligned_cols=193 Identities=9% Similarity=0.022 Sum_probs=114.6
Q ss_pred CCCeEEEEEcCCCCEEEEEcC-CeEEEEEcCCCceEEEEe--------------eecCCceEEEEEecCCCEEEEEeCCC
Q 022387 85 PPTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRD--------------FERGGGIGVVEMLFRCNILALVGGGP 149 (298)
Q Consensus 85 ~~~V~~v~fs~dg~~lasgs~-~gi~vw~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (298)
...|+++....+|.+.+ |+. +|+.+++..+........ + ....+..+....++++. +++
T Consensus 257 ~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l-~~~~v~~i~~D~~g~lW-igt--- 330 (781)
T 3v9f_A 257 SSYIFSIKQLKDNKLWI-ATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSL-SNASARYIFQDSFNNIW-IGT--- 330 (781)
T ss_dssp CCCEEEEEECTTSEEEE-EESSSCEEEEETTCC---------CEEECBCSSTTSB-SSSCEEEEEECSSCCEE-EEE---
T ss_pred CceEEEEEECCCCCEEE-EeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCC-CCCeEEEEEEeCCCCEE-EEe---
Confidence 35799999988887554 445 899899887654321111 1 12334444444444433 323
Q ss_pred CCCCCCCeEEEEeCCCCcEEEEe-------e---cCCceEEEEEeC-CeEEEEE-CCeEEEEEcCCCeEEEEEec--cCC
Q 022387 150 DPQYPLNKVMIWDDHQSRCIGEL-------S---FRSEVRSVKLRR-DRIIVVL-EQKIFVYNFADLKLLHQIET--IAN 215 (298)
Q Consensus 150 ~~~~~d~~v~iWD~~~~~~~~~~-------~---~~~~v~~v~~~~-~~l~v~~-~~~I~iwd~~~~~~i~~~~~--~~~ 215 (298)
.++-|..++..++...... . ....|.++...+ ..+.+++ ++.|.+||..+.+.. .+.. ...
T Consensus 331 ----~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~-~~~~~~~~~ 405 (781)
T 3v9f_A 331 ----WGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAI-YNKENRELL 405 (781)
T ss_dssp ----BSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEE-CC-----CC
T ss_pred ----cCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEE-EccCCCCCC
Confidence 2355888887765432211 0 123588888776 5677777 467999997654332 1111 111
Q ss_pred CcceEEEEeCCCCeEEEEecCCCceEEEEEcCCcceEeec---ccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCc
Q 022387 216 PKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIM---AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGT 292 (298)
Q Consensus 216 ~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~~~~~~~---~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~ 292 (298)
...+.++..+.++.+.+ |+.++-+..++..++....+. .....|.+|...++|.+.+... +. |.+||..+++
T Consensus 406 ~~~v~~i~~d~~g~lWi--gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~--~G-l~~~~~~~~~ 480 (781)
T 3v9f_A 406 SNSVLCSLKDSEGNLWF--GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH--AG-VFVIDLASKK 480 (781)
T ss_dssp CSBEEEEEECTTSCEEE--EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET--TE-EEEEESSSSS
T ss_pred CcceEEEEECCCCCEEE--EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC--Cc-eEEEeCCCCe
Confidence 23455677776777776 566666777777666555443 2346799999999998777654 55 7889988765
Q ss_pred E
Q 022387 293 L 293 (298)
Q Consensus 293 ~ 293 (298)
.
T Consensus 481 ~ 481 (781)
T 3v9f_A 481 V 481 (781)
T ss_dssp C
T ss_pred E
Confidence 3
No 263
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.25 E-value=0.056 Score=51.73 Aligned_cols=148 Identities=7% Similarity=-0.009 Sum_probs=82.6
Q ss_pred EEEEcCCe-EEEEEcCCCceEEEEeeecCC----ceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCCcEEEEeec
Q 022387 100 FAAGTDHG-FRIYNCDPFREIFRRDFERGG----GIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSF 174 (298)
Q Consensus 100 lasgs~~g-i~vw~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~~~~~~~~ 174 (298)
|++++.++ +.-+|.++++.+...... .. .+...-... ...+++.+++.+ .-.++.|+-+|.++++.+-++..
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~-~~~~~~~~~ssP~v~-~g~V~vg~~g~e-~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENS-DIKVGSTLTIAPYVV-KDKVIIGSSGAE-LGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECC-CGGGTCBCCSCCEEE-TTEEEECCBCGG-GTCCCEEEEEETTTCCEEEEEES
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCC-CCCccceeecCCEEE-CCEEEEEecccc-cCCCCeEEEEECCCCcEEEEEcC
Confidence 66666544 667888898887776541 10 111100111 233333332110 00268899999999998876654
Q ss_pred CCceE---------------------------------------EEEE--eCCeEEEEEC-----------------CeE
Q 022387 175 RSEVR---------------------------------------SVKL--RRDRIIVVLE-----------------QKI 196 (298)
Q Consensus 175 ~~~v~---------------------------------------~v~~--~~~~l~v~~~-----------------~~I 196 (298)
..... ...+ ..+.+.+.+. +.|
T Consensus 201 ~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv 280 (599)
T 1w6s_A 201 TGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTI 280 (599)
T ss_dssp SSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEE
T ss_pred CCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceE
Confidence 32210 1122 2345555543 389
Q ss_pred EEEEcCCCeEEEEEeccCCCc-------ceEEEEe-CCCC---eEEEEecCCCceEEEEEcCCcce
Q 022387 197 FVYNFADLKLLHQIETIANPK-------GLCAVSQ-GVGS---LVLVCPGLQKGQVRVEHYASKRT 251 (298)
Q Consensus 197 ~iwd~~~~~~i~~~~~~~~~~-------~~~~~s~-~~d~---~~la~sGs~dg~v~i~~~~~~~~ 251 (298)
..+|..+++.+..++...+.. ..+.+.. +.++ .+++ .++.+|.+.+.|..+.++
T Consensus 281 ~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~-~~~~~G~l~~lD~~tG~~ 345 (599)
T 1w6s_A 281 FGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLT-HPDRNGIVYTLDRTDGAL 345 (599)
T ss_dssp EEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEE-EECTTSEEEEEETTTCCE
T ss_pred EEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEE-EECCCcEEEEEECCCCCE
Confidence 999999999999888643211 1122221 1234 3444 478999999988776553
No 264
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.23 E-value=0.021 Score=56.17 Aligned_cols=193 Identities=9% Similarity=0.028 Sum_probs=100.6
Q ss_pred CeEEEEEc-CCCCEEEEEcC-C-----eEEEEEcCCC-ceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeE
Q 022387 87 TLLHISFN-QDHGCFAAGTD-H-----GFRIYNCDPF-REIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKV 158 (298)
Q Consensus 87 ~V~~v~fs-~dg~~lasgs~-~-----gi~vw~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v 158 (298)
.+...+|| |||++||-+.+ + .+++++++++ +.+. ..+ ........|++++..++.+..... .....|
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~-~~~--~~~~~~~~WspDg~~l~y~~~d~~--~~~~~v 249 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA-DKV--SGTNGEIVWGPDHTSLFYVTKDET--LRENKV 249 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCC-CCE--EEECSCCEECSSTTEEEEEEECTT--CCEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCC-ccc--cCceeeEEEecCCCEEEEEEECCC--CCCCEE
Confidence 57889999 99999986543 2 2778898887 5211 111 011234567888877777653210 012468
Q ss_pred EEEeCCCCcE--EEEee--cCCceEEEEEeCC--eEEEEE----CCeEEEEEcCCCe-EE--EEEec-cCCCcceEEEEe
Q 022387 159 MIWDDHQSRC--IGELS--FRSEVRSVKLRRD--RIIVVL----EQKIFVYNFADLK-LL--HQIET-IANPKGLCAVSQ 224 (298)
Q Consensus 159 ~iWD~~~~~~--~~~~~--~~~~v~~v~~~~~--~l~v~~----~~~I~iwd~~~~~-~i--~~~~~-~~~~~~~~~~s~ 224 (298)
.++++.+++. ...+. .......+.++++ .+++.. ...|.++|+.+.+ .. +.+.. ...+. ....+
T Consensus 250 ~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~--~s~~~ 327 (751)
T 2xe4_A 250 WRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVR--YDVQM 327 (751)
T ss_dssp EEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCC--EEEEE
T ss_pred EEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCce--EEEee
Confidence 8889887642 22222 1223456778775 344443 2478889987642 12 23322 11222 22221
Q ss_pred CCCCeEEEEecCCC----ceEEEEEcCC-cceEe-eccccc--ceeEEEECCCCCEEEEEeCCCC-EEEEEEC
Q 022387 225 GVGSLVLVCPGLQK----GQVRVEHYAS-KRTKF-IMAHDS--RIACFALTQDGQLLATSSTKGT-LVRIFNT 288 (298)
Q Consensus 225 ~~d~~~la~sGs~d----g~v~i~~~~~-~~~~~-~~~H~~--~V~~l~fspdg~~lAt~S~Dgt-~IrIWd~ 288 (298)
..++.+++. ...+ ..|..++... ..... +..|.. .+..+++. .+.++++...|+. .|.++|+
T Consensus 328 ~~g~~l~~~-t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 328 HGTSHLVIL-TNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp ETTTEEEEE-ECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEEC
T ss_pred eeCCEEEEE-eCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEec
Confidence 112234433 3333 3555566653 22233 444444 45566665 3456667777775 1444554
No 265
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.16 E-value=0.11 Score=49.51 Aligned_cols=190 Identities=11% Similarity=0.115 Sum_probs=107.8
Q ss_pred CCCEEEEEcCCeEEEEEcCCCceEEEEeeecCCc-e--------EEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCC
Q 022387 96 DHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGG-I--------GVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQS 166 (298)
Q Consensus 96 dg~~lasgs~~gi~vw~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~ 166 (298)
+|..++++..+++.-+|.++++.+++.... ... . .... .....+++.+ .++.|.-+|..++
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~-~~~~~~~~~~~~~~g~a--~~~~~v~~~t-------~dg~l~AlD~~TG 137 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHR-LPDDIRPCCDVVNRGAA--IYGDKVFFGT-------LDASVVALNKNTG 137 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECC-CCTTCCCSSCSCCCCCE--EETTEEEEEE-------TTTEEEEEESSSC
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCC-CCcccccccccCCCccE--EECCEEEEEe-------CCCEEEEEECCCC
Confidence 455444444466777888888887777642 111 0 0011 1234455554 4688999999999
Q ss_pred cEEEEeecCC-----ceE-EEEEeCC------eEEEEE-------CCeEEEEEcCCCeEEEEEeccCCCc----------
Q 022387 167 RCIGELSFRS-----EVR-SVKLRRD------RIIVVL-------EQKIFVYNFADLKLLHQIETIANPK---------- 217 (298)
Q Consensus 167 ~~~~~~~~~~-----~v~-~v~~~~~------~l~v~~-------~~~I~iwd~~~~~~i~~~~~~~~~~---------- 217 (298)
+.+-+..... .+. .-....+ .+++.. ++.|..+|..+++.+.+.......+
T Consensus 138 ~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~ 217 (582)
T 1flg_A 138 KVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTV 217 (582)
T ss_dssp CEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEE
T ss_pred CEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCccccc
Confidence 9877665432 111 1111223 444433 4789999999999888765321000
Q ss_pred -------------------------------ceEEEEeCCCCeEEEEecC-----------C-------C----ceEEEE
Q 022387 218 -------------------------------GLCAVSQGVGSLVLVCPGL-----------Q-------K----GQVRVE 244 (298)
Q Consensus 218 -------------------------------~~~~~s~~~d~~~la~sGs-----------~-------d----g~v~i~ 244 (298)
...++.+.. +.+++.++. . | +.|.-+
T Consensus 218 ~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~-g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~Al 296 (582)
T 1flg_A 218 TGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAET-NTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGV 296 (582)
T ss_dssp SSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTT-TEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEE
T ss_pred ccccccccCCCccccccccccccccCCccccCCceEcCCC-CEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEE
Confidence 112333332 233332231 1 2 567778
Q ss_pred EcCCcceE-ee--ccccc-------ceeEEEEC-CCCC---EEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 245 HYASKRTK-FI--MAHDS-------RIACFALT-QDGQ---LLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 245 ~~~~~~~~-~~--~~H~~-------~V~~l~fs-pdg~---~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
|.++.++. .+ ..|.. ...-+... .+|+ +++.++.+|. ++++|.++|+.+.++
T Consensus 297 D~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~-l~~lD~~tG~~lw~~ 362 (582)
T 1flg_A 297 DPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGF-FYVVDRSNGKLQNAF 362 (582)
T ss_dssp CTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSE-EEEEETTTCCEEEEE
T ss_pred eCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCce-EEEEECCCCCEeccc
Confidence 88776654 33 23421 11112222 5784 7889999999 999999999998654
No 266
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.15 E-value=0.064 Score=51.12 Aligned_cols=58 Identities=21% Similarity=0.199 Sum_probs=38.8
Q ss_pred CceEEEEEcCCcceE-eecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 238 KGQVRVEHYASKRTK-FIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 238 dg~v~i~~~~~~~~~-~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
+|.|.-||..+.++. ....+ .++..-.....|.++..++.||. ++.||.++|+++.+|
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagglvf~g~~dg~-l~A~D~~tG~~lW~~ 523 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEH-LPLWAGVLATAGNLVFTGTGDGY-FKAFDAKSGKELWKF 523 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEES-SCCCSCCEEETTTEEEEECTTSE-EEEEETTTCCEEEEE
T ss_pred cceEEEEECCCCCEEEEecCC-CCCcccceEeCCCEEEEECCCCc-EEEEECCCCCEEEEe
Confidence 577888888776543 43322 22222112224667777999999 999999999999876
No 267
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.02 E-value=0.16 Score=45.06 Aligned_cols=184 Identities=13% Similarity=0.160 Sum_probs=101.6
Q ss_pred EEEEEcCCeEEEEEcCCCceEEEEeeecCCceEEEEEecC----CCE--EEEEeCCCCCCCC--CCeEEEEeC--CCCcE
Q 022387 99 CFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFR----CNI--LALVGGGPDPQYP--LNKVMIWDD--HQSRC 168 (298)
Q Consensus 99 ~lasgs~~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~~~~~~~~~~~~~--d~~v~iWD~--~~~~~ 168 (298)
+|++.-..|+.|||+ .++.+.... .+...-+.+.+. +.. +++++.. . +++|.+|++ .++.
T Consensus 43 ii~t~k~~gL~Vydl-~G~~l~~~~---~g~~nnVD~r~~~~l~g~~~dla~as~R-----~~~~n~l~vf~iDp~~~~- 112 (355)
T 3amr_A 43 LITTNKKSGLVVYSL-DGKMLHSYN---TGKLNNVDIRYDFPLNGKKVDIAAASNR-----SEGKNTIEIYAIDGKNGT- 112 (355)
T ss_dssp EEEEETTTEEEEEET-TSCEEEEEC---CSCEEEEEEEEEEEETTEEEEEEEEEEC-----STTCCEEEEEEECTTTCC-
T ss_pred EEEEcCCCCEEEEcC-CCcEEEEcc---CCCcccEEEecccccCCceEeEEEEeCC-----CCCCCeEEEEEECCCCCc-
Confidence 344444478999999 555544443 355555555431 211 4555532 3 588999966 4443
Q ss_pred EEEeec-------C-CceEEEEE--eC--Ce-EEEEE--CCeEEEEEc-------CCCeEEEEEeccCCCcceEEEEeCC
Q 022387 169 IGELSF-------R-SEVRSVKL--RR--DR-IIVVL--EQKIFVYNF-------ADLKLLHQIETIANPKGLCAVSQGV 226 (298)
Q Consensus 169 ~~~~~~-------~-~~v~~v~~--~~--~~-l~v~~--~~~I~iwd~-------~~~~~i~~~~~~~~~~~~~~~s~~~ 226 (298)
+..+.. . ..+..+++ ++ .. .+.+. ++.+..|++ .+.+++++|..... ...|.+...
T Consensus 113 l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq-~EgcvvDd~- 190 (355)
T 3amr_A 113 LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQ-TEGMAADDE- 190 (355)
T ss_dssp EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSC-EEEEEEETT-
T ss_pred eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCC-cceEEEcCC-
Confidence 444421 1 34555665 43 22 23333 378888888 24467788876543 445555433
Q ss_pred CCeEEEEecCCCceEEEEEcCC-----cceE-ee-cccc-cceeEEEE--CCCCC-EEEEEe-CCCCEEEEEECC-CCcE
Q 022387 227 GSLVLVCPGLQKGQVRVEHYAS-----KRTK-FI-MAHD-SRIACFAL--TQDGQ-LLATSS-TKGTLVRIFNTL-DGTL 293 (298)
Q Consensus 227 d~~~la~sGs~dg~v~i~~~~~-----~~~~-~~-~~H~-~~V~~l~f--spdg~-~lAt~S-~Dgt~IrIWd~~-tg~~ 293 (298)
.+.+++ +..+.-|..++..- ..+. .+ .+|- ..+..|++ .++|+ ||+.+| .+++ ..|||.+ +.+.
T Consensus 191 ~g~Lyv--~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s-~~Vydr~~~~~~ 267 (355)
T 3amr_A 191 YGRLYI--AEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSS-YAIYDRQGKNKY 267 (355)
T ss_dssp TTEEEE--EETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTE-EEEEESSTTCCE
T ss_pred CCeEEE--ecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCE-EEEEECCCCCcE
Confidence 234444 56664454455431 1222 22 1332 46888988 56665 555555 4556 9999997 6666
Q ss_pred EEec
Q 022387 294 LQEG 297 (298)
Q Consensus 294 l~~~ 297 (298)
+..|
T Consensus 268 vg~f 271 (355)
T 3amr_A 268 VADF 271 (355)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6554
No 268
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.91 E-value=0.31 Score=50.25 Aligned_cols=176 Identities=9% Similarity=0.062 Sum_probs=103.9
Q ss_pred EEEEEcCCCceEEEEeeecCCceEEEE-EecCC---CEEEEEeC----CCCCCCCCCeEEEEeCCCCc--EEEEeecCCc
Q 022387 108 FRIYNCDPFREIFRRDFERGGGIGVVE-MLFRC---NILALVGG----GPDPQYPLNKVMIWDDHQSR--CIGELSFRSE 177 (298)
Q Consensus 108 i~vw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~----~~~~~~~d~~v~iWD~~~~~--~~~~~~~~~~ 177 (298)
+++.|-.+.+.+...++..+..+.+++ +.+.. .+++++++ +++ ....|.|.++++..++ .+.+.+..+.
T Consensus 809 i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~-~~~~Gri~vf~v~~~kL~lv~~~~v~g~ 887 (1158)
T 3ei3_A 809 LLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEA-EPKQGRIVVFQYSDGKLQTVAEKEVKGA 887 (1158)
T ss_dssp EEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCS-SCCCEEEEEEEEETTEEEEEEEEEESSC
T ss_pred EEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCC-CCCceEEEEEEEECCEEEEEEEEEcCCc
Confidence 456665556655555553222223332 33432 44554442 211 1245889999986443 3444556678
Q ss_pred eEEEEEeCCeEEEEECCeEEEEEcCCCeEEEEEec-cCCCcceEEEEeCCCCeEEEEecCCCceEEE--EEcCCcceEee
Q 022387 178 VRSVKLRRDRIIVVLEQKIFVYNFADLKLLHQIET-IANPKGLCAVSQGVGSLVLVCPGLQKGQVRV--EHYASKRTKFI 254 (298)
Q Consensus 178 v~~v~~~~~~l~v~~~~~I~iwd~~~~~~i~~~~~-~~~~~~~~~~s~~~d~~~la~sGs~dg~v~i--~~~~~~~~~~~ 254 (298)
|.+++--..+++++..++|++|++...+.++ ... +...+....+...+ .++++ |+.-..|.+ |+....++..+
T Consensus 888 v~al~~~~g~Lla~ig~~l~vy~l~~~~~L~-~~~~~~~~i~~~~l~~~~--~~I~v-gD~~~Sv~~~~y~~~~~~L~~~ 963 (1158)
T 3ei3_A 888 VYSMVEFNGKLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKTKG--DFILV-GDLMRSVLLLAYKPMEGNFEEI 963 (1158)
T ss_dssp EEEEEEETTEEEEEETTEEEEEEECTTSCEE-EEEEECCCSCEEEEEEET--TEEEE-EESSBCEEEEEEETTTTEEEEE
T ss_pred CEEEeeeCCEEEEEcCCEEEEEECCCCceEE-EEeeccccEEEEEEeccC--CEEEE-EEhhheEEEEEEEcCCCeEEEE
Confidence 9998865668888999999999997655444 221 11112233443332 45554 777777777 66555555554
Q ss_pred cc--cccceeEEEECCCCCEEEEEeCCCCEEEEEECCC
Q 022387 255 MA--HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLD 290 (298)
Q Consensus 255 ~~--H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~t 290 (298)
.. +...|++++|--+. .++.+..+|. |.|.....
T Consensus 964 a~D~~~~~vta~~~ld~~-t~l~aD~~gN-l~vl~~~~ 999 (1158)
T 3ei3_A 964 ARDFNPNWMSAVEILDDD-NFLGAENAFN-LFVCQKDS 999 (1158)
T ss_dssp EECCSCBCEEEEEEEETT-EEEEEETTSE-EEEEEECT
T ss_pred EeecccccEEEEEEEccC-cEEEEcCCCc-EEEEecCC
Confidence 43 34568888886544 6777888998 98887654
No 269
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.88 E-value=0.18 Score=43.34 Aligned_cols=195 Identities=10% Similarity=0.046 Sum_probs=108.7
Q ss_pred CCeEEEEEcCCCCEEEEEcC-CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCC
Q 022387 86 PTLLHISFNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (298)
Q Consensus 86 ~~V~~v~fs~dg~~lasgs~-~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~ 164 (298)
.....++|+++|+++++... +.|..|+.+.. ....... .+....+.+..++++++ +..+. ....|..+|..
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~~--~~~p~gia~~~dG~l~v-ad~~~----~~~~v~~~d~~ 103 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHATV--EGKVSGLAFTSNGDLVA-TGWNA----DSIPVVSLVKS 103 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEEC--SSEEEEEEECTTSCEEE-EEECT----TSCEEEEEECT
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEeC--CCCceeEEEcCCCcEEE-EeccC----CcceEEEEcCC
Confidence 46778999999997777655 55667776543 2222332 34556666777776443 33211 11246667777
Q ss_pred CCcEEEEeecCC--ceEEEEEe-CCeEEEEE--CCeEEEEEcCCCeE-EEEEec-------cCCCcceEEEEeCCCCeEE
Q 022387 165 QSRCIGELSFRS--EVRSVKLR-RDRIIVVL--EQKIFVYNFADLKL-LHQIET-------IANPKGLCAVSQGVGSLVL 231 (298)
Q Consensus 165 ~~~~~~~~~~~~--~v~~v~~~-~~~l~v~~--~~~I~iwd~~~~~~-i~~~~~-------~~~~~~~~~~s~~~d~~~l 231 (298)
+++......... ....++.. ...++++. .+.|.++|....+. +..... .........+++++ ..|
T Consensus 104 ~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg--~~l 181 (306)
T 2p4o_A 104 DGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFG--NFL 181 (306)
T ss_dssp TSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEET--TEE
T ss_pred CCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCC--CEE
Confidence 776543332211 12223322 33344443 47888888765421 211111 01111222345554 333
Q ss_pred EEecCCCceEEEEEcCC-cce---EeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcE
Q 022387 232 VCPGLQKGQVRVEHYAS-KRT---KFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTL 293 (298)
Q Consensus 232 a~sGs~dg~v~i~~~~~-~~~---~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~ 293 (298)
.++-...+.|..++... ..+ ..+. .......|+++++|+++++....+. |.++|.. |+.
T Consensus 182 yv~d~~~~~I~~~~~~~~g~~~~~~~~~-~~~~P~gi~vd~dG~l~va~~~~~~-V~~~~~~-G~~ 244 (306)
T 2p4o_A 182 YVSNTEKMLLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGNLYGATHIYNS-VVRIAPD-RST 244 (306)
T ss_dssp EEEETTTTEEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCCEEEECBTTCC-EEEECTT-CCE
T ss_pred EEEeCCCCEEEEEEeCCCCCCCccEEEe-ccCCCCCeEECCCCCEEEEeCCCCe-EEEECCC-CCE
Confidence 33467778888888764 221 1111 1245788999999999888887888 9999965 665
No 270
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.88 E-value=0.23 Score=44.52 Aligned_cols=199 Identities=9% Similarity=-0.050 Sum_probs=109.8
Q ss_pred CCeEEEEEcCCCCEEE-EEcC-CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeC
Q 022387 86 PTLLHISFNQDHGCFA-AGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (298)
Q Consensus 86 ~~V~~v~fs~dg~~la-sgs~-~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~ 163 (298)
.....++|.+.+..|. +-.. +.|..++.+.......... .......+.+.+....+.++.. ..+.|.+.+.
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~-~~~~p~glavd~~~g~lY~~d~------~~~~I~~~~~ 188 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST-GLESPGGLAVDWVHDKLYWTDS------GTSRIEVANL 188 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECS-SCSCCCCEEEETTTTEEEEEET------TTTEEEECBT
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeC-CCCCccEEEEEeCCCeEEEEcC------CCCeEEEEeC
Confidence 3678899997655544 4434 4466777765543222211 1122334555555555555543 2467888887
Q ss_pred CCCcEEEEeec-CCceEEEEEeC--CeEEEEEC---CeEEEEEcCCCeEEEEEe-ccCCCcceEEEEeCCCCeEEEEecC
Q 022387 164 HQSRCIGELSF-RSEVRSVKLRR--DRIIVVLE---QKIFVYNFADLKLLHQIE-TIANPKGLCAVSQGVGSLVLVCPGL 236 (298)
Q Consensus 164 ~~~~~~~~~~~-~~~v~~v~~~~--~~l~v~~~---~~I~iwd~~~~~~i~~~~-~~~~~~~~~~~s~~~d~~~la~sGs 236 (298)
........+.. ......+++++ ..++++.. +.|..+++..... ..+. .....-..++++++....++ +-+
T Consensus 189 dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~-~~~~~~~~~~PnGlavd~~~~~lY~--aD~ 265 (386)
T 3v65_B 189 DGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR-RIIADTHLFWPNGLTIDYAGRRMYW--VDA 265 (386)
T ss_dssp TSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEECSSCSCEEEEEEEGGGTEEEE--EET
T ss_pred CCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCc-EEEEECCCCCeeeEEEeCCCCEEEE--EEC
Confidence 65433222222 23456777774 45555542 5788887753322 2222 22222234566654433333 356
Q ss_pred CCceEEEEEcCCcceE-eecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEe
Q 022387 237 QKGQVRVEHYASKRTK-FIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQE 296 (298)
Q Consensus 237 ~dg~v~i~~~~~~~~~-~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~ 296 (298)
..+.|...++...... .+.........|++ ..+.++.+-...+. |..+|..+|+.+++
T Consensus 266 ~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~-V~~~~~~~G~~~~~ 324 (386)
T 3v65_B 266 KHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKS-INSANKFTGKNQEI 324 (386)
T ss_dssp TTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTE-EEEEETTTCCSCEE
T ss_pred CCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCe-EEEEECCCCcceEE
Confidence 6778888887754433 33333456788888 45567777766777 88999777765443
No 271
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.83 E-value=0.2 Score=43.03 Aligned_cols=181 Identities=9% Similarity=-0.114 Sum_probs=91.5
Q ss_pred CCeEEEEEcCCCCEEEEEcC-Ce--EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEe
Q 022387 86 PTLLHISFNQDHGCFAAGTD-HG--FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWD 162 (298)
Q Consensus 86 ~~V~~v~fs~dg~~lasgs~-~g--i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD 162 (298)
..+.++++.+||+++++... ++ +..++..+.+...............+... ....+.++.. ..+.|.++|
T Consensus 72 ~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~-~~~~~~v~d~------~~g~i~~~d 144 (306)
T 2p4o_A 72 GKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPL-SDTQYLTADS------YRGAIWLID 144 (306)
T ss_dssp SEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEES-SSSEEEEEET------TTTEEEEEE
T ss_pred CCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCccccc-CCCcEEEEEC------CCCeEEEEe
Confidence 36889999999997666543 44 44455555544322221001111122222 2333333321 247788888
Q ss_pred CCCCcE-EEEee-------c-C--CceEEEEEeCCeEEEEEC--CeEEEEEcCC-CeE--EEEEeccCCCcceEEEEeCC
Q 022387 163 DHQSRC-IGELS-------F-R--SEVRSVKLRRDRIIVVLE--QKIFVYNFAD-LKL--LHQIETIANPKGLCAVSQGV 226 (298)
Q Consensus 163 ~~~~~~-~~~~~-------~-~--~~v~~v~~~~~~l~v~~~--~~I~iwd~~~-~~~--i~~~~~~~~~~~~~~~s~~~ 226 (298)
..++.. +.... . . .....+....+.+.++.. +.|..|++.. ++. ...+.....+ .-+++. +
T Consensus 145 ~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P-~gi~vd--~ 221 (306)
T 2p4o_A 145 VVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNI-DDFAFD--V 221 (306)
T ss_dssp TTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCC-SSEEEB--T
T ss_pred CCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCC-CCeEEC--C
Confidence 765421 11100 0 0 123344444556777653 7999999864 221 1222221222 234444 4
Q ss_pred CCeEEEEecCCCceEEEEEcCCcceE--eecccccceeEEEEC---CCCCEEEEEe
Q 022387 227 GSLVLVCPGLQKGQVRVEHYASKRTK--FIMAHDSRIACFALT---QDGQLLATSS 277 (298)
Q Consensus 227 d~~~la~sGs~dg~v~i~~~~~~~~~--~~~~H~~~V~~l~fs---pdg~~lAt~S 277 (298)
++.++++ ....+.|.+++...+... .+......+++++|. ||++.|..++
T Consensus 222 dG~l~va-~~~~~~V~~~~~~G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~ 276 (306)
T 2p4o_A 222 EGNLYGA-THIYNSVVRIAPDRSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVT 276 (306)
T ss_dssp TCCEEEE-CBTTCCEEEECTTCCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEE
T ss_pred CCCEEEE-eCCCCeEEEECCCCCEEEEeecccccCCceEEEEecccCCCCEEEEEC
Confidence 4566553 555678888876643322 233233568999999 8875544443
No 272
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.77 E-value=0.22 Score=43.80 Aligned_cols=149 Identities=8% Similarity=0.102 Sum_probs=93.1
Q ss_pred EEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCCcEEEEeecCC---------ceEEEEE---eC-CeEEEEEC------
Q 022387 133 VEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRS---------EVRSVKL---RR-DRIIVVLE------ 193 (298)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~~~~~~~~~~---------~v~~v~~---~~-~~l~v~~~------ 193 (298)
..|......+.+++ +..++|..||...+..... .+.. .+..+.+ .+ .+++++.+
T Consensus 18 ~~wd~~~g~~~vs~------l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~ 90 (334)
T 2p9w_A 18 TIYDRTRQVFYQSN------LYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFN 90 (334)
T ss_dssp EEEETTTTEEEEEE------TTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTC
T ss_pred ccCcCCCCEEEEEe------ccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccc
Confidence 34444445555555 2458899999876543322 2221 3577888 44 45655432
Q ss_pred ---------CeEEEEEcC---CCeEEEEEecc----C-------CCcceEEEEeCCCCeEEEEecCCC-ceEEEEEcCCc
Q 022387 194 ---------QKIFVYNFA---DLKLLHQIETI----A-------NPKGLCAVSQGVGSLVLVCPGLQK-GQVRVEHYASK 249 (298)
Q Consensus 194 ---------~~I~iwd~~---~~~~i~~~~~~----~-------~~~~~~~~s~~~d~~~la~sGs~d-g~v~i~~~~~~ 249 (298)
..|..||+. +++.+....-. . .......+..++++...++ ++.. +.|...+-..+
T Consensus 91 ~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt-~s~~~~~I~rV~pdG~ 169 (334)
T 2p9w_A 91 FADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVA-FALGMPAIARVSADGK 169 (334)
T ss_dssp TTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEE-EEESSCEEEEECTTSC
T ss_pred ccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEe-CCCCCCeEEEEeCCCC
Confidence 579999998 77776655421 1 2234667888888887773 6666 66555555544
Q ss_pred ceEeec-----c-cccceeEEEECCCCCEEEEEeCCCCEEEEEECCC
Q 022387 250 RTKFIM-----A-HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLD 290 (298)
Q Consensus 250 ~~~~~~-----~-H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~t 290 (298)
....+. . .....+.|+++|||++|+....+|. +..||+.+
T Consensus 170 ~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~-L~~fD~~~ 215 (334)
T 2p9w_A 170 TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRA-LTAFDVSK 215 (334)
T ss_dssp CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSS-EEEEECSS
T ss_pred EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCe-EEEEcCCC
Confidence 333221 1 1223789999999988888866888 88889774
No 273
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.66 E-value=0.38 Score=43.91 Aligned_cols=198 Identities=10% Similarity=0.034 Sum_probs=103.9
Q ss_pred CeEEEEEcCC---CCEEEEEcCCeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeC
Q 022387 87 TLLHISFNQD---HGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (298)
Q Consensus 87 ~V~~v~fs~d---g~~lasgs~~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~ 163 (298)
....++|+|+ |.++++-....|+.++.+......... .......+.+..+++ +.++..+.. .....+...+.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~--~~~~P~giavd~dG~-lyVad~~~~--~~~~gv~~~~~ 214 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT--NIGQCADVNFTLNGD-MVVVDDQSS--DTNTGIYLFTR 214 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC--CCSCEEEEEECTTCC-EEEEECCSC--TTSEEEEEECG
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec--CCCCccEEEECCCCC-EEEEcCCCC--cccceEEEEEC
Confidence 4568999985 554444333567788876655432222 134466777888887 444442110 00122333333
Q ss_pred CCCcE-EEEeecCCceEEEEEeC--CeEEEEE--CCeEEEEEcCCCeEEEEEec-cCCC-cceEEEEeCCCCeEEEEecC
Q 022387 164 HQSRC-IGELSFRSEVRSVKLRR--DRIIVVL--EQKIFVYNFADLKLLHQIET-IANP-KGLCAVSQGVGSLVLVCPGL 236 (298)
Q Consensus 164 ~~~~~-~~~~~~~~~v~~v~~~~--~~l~v~~--~~~I~iwd~~~~~~i~~~~~-~~~~-~~~~~~s~~~d~~~la~sGs 236 (298)
..+.. ...+........+++++ ..+.++. .+.|+.+|..+++....+.. ...+ ...+++++ ++..|.++-.
T Consensus 215 ~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dp--dG~~LYvad~ 292 (433)
T 4hw6_A 215 ASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHP--TGDWAYIIYN 292 (433)
T ss_dssp GGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECT--TSSEEEEEET
T ss_pred CCCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeC--CCCEEEEEeC
Confidence 22211 01111122334566665 3455543 36899998876665333322 1111 11245544 4453333356
Q ss_pred CCceEEEEEcCC--cce---Eeeccc---------------ccceeEEEE---------CCCCCEEEEEeCCCCEEEEEE
Q 022387 237 QKGQVRVEHYAS--KRT---KFIMAH---------------DSRIACFAL---------TQDGQLLATSSTKGTLVRIFN 287 (298)
Q Consensus 237 ~dg~v~i~~~~~--~~~---~~~~~H---------------~~~V~~l~f---------spdg~~lAt~S~Dgt~IrIWd 287 (298)
.++.|...++.. +.+ .++.+. -.....|+| .++|.++++-...+. |++++
T Consensus 293 ~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~-I~~~~ 371 (433)
T 4hw6_A 293 GKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHT-VRVLT 371 (433)
T ss_dssp TTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTE-EEEEC
T ss_pred CCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCE-EEEEC
Confidence 677888866542 211 122221 124678999 788888888777777 99998
Q ss_pred CCCCcE
Q 022387 288 TLDGTL 293 (298)
Q Consensus 288 ~~tg~~ 293 (298)
. +|..
T Consensus 372 ~-~G~v 376 (433)
T 4hw6_A 372 P-EGRV 376 (433)
T ss_dssp T-TSEE
T ss_pred C-CCCE
Confidence 4 6643
No 274
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.56 E-value=0.016 Score=60.25 Aligned_cols=173 Identities=13% Similarity=0.179 Sum_probs=118.2
Q ss_pred CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCCcEEEEeecCCceEEEEE-e
Q 022387 106 HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKL-R 184 (298)
Q Consensus 106 ~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~~~~~~~~~~~v~~v~~-~ 184 (298)
..+.|.|+.......++.. ..+ ..-+.+....+|+-.| +++.|+|+++.+.+..+.+..+|.-+.| +
T Consensus 48 ~~vvIidl~~~~~~~rrpi--~Ad--sAIMnP~~~iiALrag--------~~lQiFnl~~k~klks~~~~e~VvfWkWis 115 (1630)
T 1xi4_A 48 AQVVIIDMNDPSNPIRRPI--SAD--SAIMNPASKVIALKAG--------KTLQIFNIEMKSKMKAHTMTDDVTFWKWIS 115 (1630)
T ss_pred ceEEEEECCCCCCcccccc--cch--hhccCCCcceEEEecC--------CeEEEeehHHhhhhcccccCCCceEEEecC
Confidence 4578889887666555543 222 2334566667777552 6799999999999999999889988887 6
Q ss_pred CCeEEEEECCeEEEEEcC-CCeEEEEEeccCC--CcceEEEEeCCCCeEEEEec------CCCceEEEEEcCCcceEeec
Q 022387 185 RDRIIVVLEQKIFVYNFA-DLKLLHQIETIAN--PKGLCAVSQGVGSLVLVCPG------LQKGQVRVEHYASKRTKFIM 255 (298)
Q Consensus 185 ~~~l~v~~~~~I~iwd~~-~~~~i~~~~~~~~--~~~~~~~s~~~d~~~la~sG------s~dg~v~i~~~~~~~~~~~~ 255 (298)
++.+.++++..|..|++. +..+++.|..|.. ...++.+..+++..+++..| ...|.+.++..+.+....+.
T Consensus 116 ~~~l~lVT~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~ie 195 (1630)
T 1xi4_A 116 LNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIE 195 (1630)
T ss_pred CCeeEEEcCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhh
Confidence 788888999999999996 3455555555532 23456667777777777654 35789999998887777788
Q ss_pred ccccceeEEEEC--C-CCCEEEEEeC--CCCEEEEEECCC
Q 022387 256 AHDSRIACFALT--Q-DGQLLATSST--KGTLVRIFNTLD 290 (298)
Q Consensus 256 ~H~~~V~~l~fs--p-dg~~lAt~S~--Dgt~IrIWd~~t 290 (298)
||.+.-..+... + ..++|+-+.. .|..++|-++..
T Consensus 196 gha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~ 235 (1630)
T 1xi4_A 196 GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGT 235 (1630)
T ss_pred HhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCC
Confidence 887766555553 1 2334443322 222388888754
No 275
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.53 E-value=0.38 Score=42.39 Aligned_cols=198 Identities=9% Similarity=-0.052 Sum_probs=109.5
Q ss_pred CCeEEEEEcCCCCEEE-EEcC-CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeC
Q 022387 86 PTLLHISFNQDHGCFA-AGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (298)
Q Consensus 86 ~~V~~v~fs~dg~~la-sgs~-~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~ 163 (298)
..+..++|++.+..|. +-.. +.|..++.+.......... .......+.+.+....+..+.. ..+.|.+.+.
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~-~~~~p~glavd~~~g~ly~~d~------~~~~I~~~~~ 145 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST-GLESPGGLAVDWVHDKLYWTDS------GTSRIEVANL 145 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS-SCSCCCEEEEETTTTEEEEEET------TTTEEEEEET
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeC-CCCCccEEEEecCCCeEEEEcC------CCCeEEEEcC
Confidence 3578999997665555 4434 4566777766543222211 1123344556655555555543 2477888888
Q ss_pred CCCcEEEEeec-CCceEEEEEeC--CeEEEEEC---CeEEEEEcCCCeEEEEEe-ccCCCcceEEEEeCCCCeEEEEecC
Q 022387 164 HQSRCIGELSF-RSEVRSVKLRR--DRIIVVLE---QKIFVYNFADLKLLHQIE-TIANPKGLCAVSQGVGSLVLVCPGL 236 (298)
Q Consensus 164 ~~~~~~~~~~~-~~~v~~v~~~~--~~l~v~~~---~~I~iwd~~~~~~i~~~~-~~~~~~~~~~~s~~~d~~~la~sGs 236 (298)
........+.. ......+++++ ..+.++.. +.|..+++.... ...+. .....-..++++++.. .+++ +-.
T Consensus 146 dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~~~~~~PnGla~d~~~~-~lY~-aD~ 222 (349)
T 3v64_C 146 DGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG-RRIIADTHLFWPNGLTIDYAGR-RMYW-VDA 222 (349)
T ss_dssp TSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEESCCSSCSCEEEEEEETTTT-EEEE-EET
T ss_pred CCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC-cEEEEECCCCCcceEEEeCCCC-EEEE-EEC
Confidence 65433222222 23456777875 34555542 567777765322 22221 1111123345554433 3333 356
Q ss_pred CCceEEEEEcCCcceE-eecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE
Q 022387 237 QKGQVRVEHYASKRTK-FIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQ 295 (298)
Q Consensus 237 ~dg~v~i~~~~~~~~~-~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~ 295 (298)
..+.|...++...... .+.........|++ .++.++.+-...+. |..++..+|+.++
T Consensus 223 ~~~~I~~~~~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~-V~~~~~~~G~~~~ 280 (349)
T 3v64_C 223 KHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKS-INSANKFTGKNQE 280 (349)
T ss_dssp TTTEEEEEETTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTE-EEEEETTTCCSCE
T ss_pred CCCEEEEEeCCCCceEEEEeCCCCCceEEEE-ECCEEEEecCCCCe-EEEEEccCCCccE
Confidence 6778888887765433 23333456788888 45666677666777 8888877776544
No 276
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.46 E-value=0.5 Score=43.00 Aligned_cols=198 Identities=9% Similarity=0.052 Sum_probs=103.1
Q ss_pred CeEEEEEcC-CCCEEEEEcC-CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCC
Q 022387 87 TLLHISFNQ-DHGCFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (298)
Q Consensus 87 ~V~~v~fs~-dg~~lasgs~-~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~ 164 (298)
....++|+| ++..|.+... +.|+.++.+......... .......+++..+++.+.++..+... ....+.+.+.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~--~~~~P~~ia~d~~G~~lyvad~~~~~--~~~~v~~~~~- 212 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS--GLSKVRTICWTHEADSMIITNDQNNN--DRPNNYILTR- 212 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC--CCSCEEEEEECTTSSEEEEEECCSCT--TSEEEEEEEG-
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec--CCCCcceEEEeCCCCEEEEEeCCCCc--ccceEEEEeC-
Confidence 457889998 3444544443 557788887655433222 24456777888888866666532110 1123333443
Q ss_pred CCcEE--EEeecCCceEEEEEeC--CeEEEEE--CCeEEEEEcCCCeEEEEEeccC-CCcceEEEEeCCCCeEEEEecCC
Q 022387 165 QSRCI--GELSFRSEVRSVKLRR--DRIIVVL--EQKIFVYNFADLKLLHQIETIA-NPKGLCAVSQGVGSLVLVCPGLQ 237 (298)
Q Consensus 165 ~~~~~--~~~~~~~~v~~v~~~~--~~l~v~~--~~~I~iwd~~~~~~i~~~~~~~-~~~~~~~~s~~~d~~~la~sGs~ 237 (298)
.+... ..+........+++++ ..+.++. .+.|..++..+........... .....+++ ++++.+|.++-..
T Consensus 213 ~g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~--~pdG~~lyv~d~~ 290 (430)
T 3tc9_A 213 ESGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQF--HPSGNYAYIVVVN 290 (430)
T ss_dssp GGTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEE--CTTSSEEEEEETT
T ss_pred CCceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEE--cCCCCEEEEEECC
Confidence 22211 2222223455667776 3455554 3789999987665422222211 11223444 4455533333567
Q ss_pred CceEEEEEcCC--cce---Eeeccc---------------cccee-EEEEC--------CCCCEEEEEeCCCCEEEEEEC
Q 022387 238 KGQVRVEHYAS--KRT---KFIMAH---------------DSRIA-CFALT--------QDGQLLATSSTKGTLVRIFNT 288 (298)
Q Consensus 238 dg~v~i~~~~~--~~~---~~~~~H---------------~~~V~-~l~fs--------pdg~~lAt~S~Dgt~IrIWd~ 288 (298)
++.|..++... +.+ .++.+. -.... .++.. ++|.++++=...+. |+.++
T Consensus 291 ~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~-I~~i~- 368 (430)
T 3tc9_A 291 QHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHC-IRILT- 368 (430)
T ss_dssp TTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTE-EEEEC-
T ss_pred CCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcE-EEEEC-
Confidence 77888866542 211 122111 11233 45553 45777777666666 88888
Q ss_pred CCCcE
Q 022387 289 LDGTL 293 (298)
Q Consensus 289 ~tg~~ 293 (298)
.+|+.
T Consensus 369 ~~G~v 373 (430)
T 3tc9_A 369 PQGRV 373 (430)
T ss_dssp TTSEE
T ss_pred CCCcE
Confidence 55644
No 277
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.40 E-value=0.37 Score=40.78 Aligned_cols=193 Identities=7% Similarity=0.049 Sum_probs=106.9
Q ss_pred CCeEEEEEcCCCCEEEE-EcCCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeC
Q 022387 86 PTLLHISFNQDHGCFAA-GTDHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (298)
Q Consensus 86 ~~V~~v~fs~dg~~las-gs~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~ 163 (298)
..+..++|+|++..|.+ ...++ |...|.+ ++.+....+....+...+++..++ .++++.. .++.+.++++
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g-~~~vs~E------~~~~l~~~~v 98 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDN-QFVISDE------RDYAIYVISL 98 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTT-EEEEEET------TTTEEEEEEE
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCC-EEEEEEC------CCCcEEEEEc
Confidence 37999999998775554 44444 4455555 444444444212456666666444 4555543 2477888887
Q ss_pred CCCcE---EEEeec-------CCceEEEEEeCC--eEEEEEC-C--eEEEEEc-CCCeEEEEEec-------cCCCcceE
Q 022387 164 HQSRC---IGELSF-------RSEVRSVKLRRD--RIIVVLE-Q--KIFVYNF-ADLKLLHQIET-------IANPKGLC 220 (298)
Q Consensus 164 ~~~~~---~~~~~~-------~~~v~~v~~~~~--~l~v~~~-~--~I~iwd~-~~~~~i~~~~~-------~~~~~~~~ 220 (298)
..... +....+ +...-.+++++. .+.++.+ + .|..|+- ...+.+..+.. +......+
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l 178 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA 178 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence 65432 233322 113467888764 6777654 3 4455541 11111122211 11234566
Q ss_pred EEEeCCCCeEEEEecCCCceEEEEEcCCcceE--eec-ccc------cceeEEEECCCCCEEEEEeCCCCEEEEEECCC
Q 022387 221 AVSQGVGSLVLVCPGLQKGQVRVEHYASKRTK--FIM-AHD------SRIACFALTQDGQLLATSSTKGTLVRIFNTLD 290 (298)
Q Consensus 221 ~~s~~~d~~~la~sGs~dg~v~i~~~~~~~~~--~~~-~H~------~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~t 290 (298)
++.+.. +.+++. ......+.+.|.+.+... .+. +.. ..-..|+|.++|+++++ |+..- +.+|.-..
T Consensus 179 ~~dp~t-g~lliL-S~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~-~y~f~~~~ 253 (255)
T 3qqz_A 179 EFNQQK-NTLLVL-SHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNR-FYRFTPQS 253 (255)
T ss_dssp EEETTT-TEEEEE-ETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTE-EEEEEC--
T ss_pred EEcCCC-CeEEEE-ECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCce-EEEEEecC
Confidence 776654 355554 466677777888776433 333 221 25789999999997777 66654 77776443
No 278
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.36 E-value=0.58 Score=42.60 Aligned_cols=196 Identities=8% Similarity=0.013 Sum_probs=99.9
Q ss_pred CCCeEEEEEcCCCCEEEEEcC-C----eEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEE
Q 022387 85 PPTLLHISFNQDHGCFAAGTD-H----GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (298)
Q Consensus 85 ~~~V~~v~fs~dg~~lasgs~-~----gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~ 159 (298)
......|+|+++|++|.++.. + ...+|............+........+.+.+....+.++.. ..+.|.
T Consensus 178 ~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~------~~~~V~ 251 (430)
T 3tc9_A 178 LSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITELTKGQNCNGAETHPINGELYFNSW------NAGQVF 251 (430)
T ss_dssp CSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEEECSSCCCEEECTTTCCEEEEET------TTTEEE
T ss_pred CCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeeeccCCCceEEEEeCCCCEEEEEEC------CCCEEE
Confidence 346889999999995554432 1 12233222221110011100122334445553334444442 347899
Q ss_pred EEeCCCCcEEEEeec--CCceEEEEEeCC--eEEEEE--CCeEEEEEcCC--CeE--EEEEecc----------------
Q 022387 160 IWDDHQSRCIGELSF--RSEVRSVKLRRD--RIIVVL--EQKIFVYNFAD--LKL--LHQIETI---------------- 213 (298)
Q Consensus 160 iWD~~~~~~~~~~~~--~~~v~~v~~~~~--~l~v~~--~~~I~iwd~~~--~~~--i~~~~~~---------------- 213 (298)
.+|...+........ ......++++++ .+.++. .+.|..++... .+. +..+...
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~ 331 (430)
T 3tc9_A 252 RYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARM 331 (430)
T ss_dssp EEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBB
T ss_pred EEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEe
Confidence 999887654222222 224567888875 366664 36888887642 222 2233221
Q ss_pred CCCcceEEEEe------CCCCeEEEEecCCCceEEEEEcCCcceEeeccc------------------ccceeEEEECC-
Q 022387 214 ANPKGLCAVSQ------GVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAH------------------DSRIACFALTQ- 268 (298)
Q Consensus 214 ~~~~~~~~~s~------~~d~~~la~sGs~dg~v~i~~~~~~~~~~~~~H------------------~~~V~~l~fsp- 268 (298)
..|...+++.. +.++.++++ -..+..|+..+.+ ..+.++.+. -...+.|+++|
T Consensus 332 ~~P~~gv~v~~~~y~~~D~~g~lyva-D~~n~~I~~i~~~-G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~ 409 (430)
T 3tc9_A 332 HAPRQGTFVKNPAYKGSSDEYDFYFC-DRENHCIRILTPQ-GRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEE 409 (430)
T ss_dssp SSEEEEEEEECGGGTTSSCCEEEEEE-EGGGTEEEEECTT-SEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETT
T ss_pred CCCcceEEEccccccccCCCCeEEEE-ECCCcEEEEECCC-CcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECC
Confidence 01111233322 234455543 4455666666633 333333221 12588999999
Q ss_pred CCCEEEEEeCCCCEEEEEECC
Q 022387 269 DGQLLATSSTKGTLVRIFNTL 289 (298)
Q Consensus 269 dg~~lAt~S~Dgt~IrIWd~~ 289 (298)
+|.++++-..... ||.++++
T Consensus 410 ~g~lyVaD~~n~r-Ir~i~~e 429 (430)
T 3tc9_A 410 RECFFIGDRENRR-IRKIGYE 429 (430)
T ss_dssp TTEEEEEEGGGTE-EEEEEEC
T ss_pred CCEEEEEECCCCe-EEEEccC
Confidence 5777777666666 8888764
No 279
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.23 E-value=0.52 Score=40.79 Aligned_cols=181 Identities=7% Similarity=-0.087 Sum_probs=101.1
Q ss_pred EEEEEcCCeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCC----CcEEEEeec
Q 022387 99 CFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ----SRCIGELSF 174 (298)
Q Consensus 99 ~lasgs~~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~----~~~~~~~~~ 174 (298)
+|+.+..+.|+..+++......... .......+.+....+.+..+.. ..+.|..+|... ......+..
T Consensus 3 ~ll~~~~~~I~~i~~~~~~~~~~~~--~~~~p~g~~~d~~~~~ly~~D~------~~~~I~~~~~~g~~~~~~~~~~~~~ 74 (316)
T 1ijq_A 3 YLFFTNRHEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDL------SQRMICSTQLDRAHGVSSYDTVISR 74 (316)
T ss_dssp EEEEECBSSEEEEETTSCCCEEEEC--SCSSEEEEEEETTTTEEEEEET------TTTEEEEEEC--------CEEEECS
T ss_pred EEEEECCCeEEEEECCCcceEehhc--CCCceEEEEEEeCCCEEEEEEC------CCCcEEEEECCCCCCCcccEEEEeC
Confidence 5666667778888888765433322 1345566677766666666653 347899999875 221212221
Q ss_pred -CCceEEEEEe--CCeEEEEE--CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEecCCC-ceEEEEEcCC
Q 022387 175 -RSEVRSVKLR--RDRIIVVL--EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQK-GQVRVEHYAS 248 (298)
Q Consensus 175 -~~~v~~v~~~--~~~l~v~~--~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs~d-g~v~i~~~~~ 248 (298)
......+++. ...+.++. .+.|.++++........+.........+++.+.. +.++. +.... +.|...+.+.
T Consensus 75 ~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~-g~ly~-~d~~~~~~I~~~~~dG 152 (316)
T 1ijq_A 75 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVH-GFMYW-TDWGTPAKIKKGGLNG 152 (316)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTT-TEEEE-EECSSSCEEEEEETTS
T ss_pred CCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCC-CEEEE-EccCCCCeEEEEcCCC
Confidence 1234556665 45666654 3789999986443322222221222334444432 34444 23333 6777777765
Q ss_pred cceEee-cccccceeEEEECCCCCEE-EEEeCCCCEEEEEECCC
Q 022387 249 KRTKFI-MAHDSRIACFALTQDGQLL-ATSSTKGTLVRIFNTLD 290 (298)
Q Consensus 249 ~~~~~~-~~H~~~V~~l~fspdg~~l-At~S~Dgt~IrIWd~~t 290 (298)
.....+ ...-...+.|+|++++..| .+-+..+. |..+|+..
T Consensus 153 ~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~-I~~~d~dg 195 (316)
T 1ijq_A 153 VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS-ISSIDVNG 195 (316)
T ss_dssp CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTE-EEEEETTS
T ss_pred CCeEEEEECCCCCceEEEEeccCCEEEEEECCCCe-EEEEecCC
Confidence 544433 2233568899999876544 44455566 99999864
No 280
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.22 E-value=0.8 Score=44.82 Aligned_cols=197 Identities=10% Similarity=0.024 Sum_probs=101.8
Q ss_pred EEEEEcCCCCEEEEEcCC------eEEEEEcCCCce--EEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEE
Q 022387 89 LHISFNQDHGCFAAGTDH------GFRIYNCDPFRE--IFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (298)
Q Consensus 89 ~~v~fs~dg~~lasgs~~------gi~vw~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i 160 (298)
..++|+|||+.|+....+ .+.++++.+... ..........-.....+++++..+++..... ....|.+
T Consensus 224 ~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~----~~~~l~~ 299 (751)
T 2xe4_A 224 GEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSP----ETAEVHL 299 (751)
T ss_dssp SCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECS----SCEEEEE
T ss_pred eeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCC----CCceEEE
Confidence 357899999877765532 244566665431 1222210122234567888998888776432 3467899
Q ss_pred EeCCCCc-EE--EEeec--CCceEEEEEe-CCeEEEEEC------CeEEEEEcCCCeEEEE-EeccCCCcceEEEEeCCC
Q 022387 161 WDDHQSR-CI--GELSF--RSEVRSVKLR-RDRIIVVLE------QKIFVYNFADLKLLHQ-IETIANPKGLCAVSQGVG 227 (298)
Q Consensus 161 WD~~~~~-~~--~~~~~--~~~v~~v~~~-~~~l~v~~~------~~I~iwd~~~~~~i~~-~~~~~~~~~~~~~s~~~d 227 (298)
+|+.++. .. ..+.. ......+.|+ .+.+++.++ ..|..+++.+...... +..+........+++..
T Consensus 300 ~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~- 378 (751)
T 2xe4_A 300 LDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRS- 378 (751)
T ss_dssp EESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECS-
T ss_pred EECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEEC-
Confidence 9998752 12 33322 2345666644 455666553 2677777754222222 33333323344566654
Q ss_pred CeEEEEecCCCceEEE--EEc-------CCcc-eEeeccc-ccceeEEEE----CCCC-CEEEEEeCC---CCEEEEEEC
Q 022387 228 SLVLVCPGLQKGQVRV--EHY-------ASKR-TKFIMAH-DSRIACFAL----TQDG-QLLATSSTK---GTLVRIFNT 288 (298)
Q Consensus 228 ~~~la~sGs~dg~v~i--~~~-------~~~~-~~~~~~H-~~~V~~l~f----spdg-~~lAt~S~D---gt~IrIWd~ 288 (298)
..|+++...+|..++ ++. ..+. ...+.-- ...+..+.+ ++++ .++++.+.. .. |.++|+
T Consensus 379 -~~lv~~~~~~g~~~l~~~dl~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~-~~~~d~ 456 (751)
T 2xe4_A 379 -NYLVVAGRRAGLTRIWTMMADSQDGVFKAGTGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNT-WFDVSP 456 (751)
T ss_dssp -SEEEEEEEETTEEEEEEEECCTTTSCCCTTTCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEE-EEEECT
T ss_pred -CEEEEEEEeCCEEEEEEEecccccccccCCccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCE-EEEEEC
Confidence 344445778887666 443 3333 3333211 112233322 4465 455555443 24 666777
Q ss_pred CCCc
Q 022387 289 LDGT 292 (298)
Q Consensus 289 ~tg~ 292 (298)
.+|+
T Consensus 457 ~~~~ 460 (751)
T 2xe4_A 457 QDHS 460 (751)
T ss_dssp TTCC
T ss_pred CCCc
Confidence 7765
No 281
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.12 E-value=0.73 Score=41.43 Aligned_cols=200 Identities=8% Similarity=-0.060 Sum_probs=110.7
Q ss_pred CCeEEEEEcCCCCEEEEE-cC-CeEEEEEcCCCc----eEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEE
Q 022387 86 PTLLHISFNQDHGCFAAG-TD-HGFRIYNCDPFR----EIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (298)
Q Consensus 86 ~~V~~v~fs~dg~~lasg-s~-~gi~vw~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~ 159 (298)
..+..++|++.+..|... .. +.|..++++... ....... .......+++.+....++.+.. ..+.|.
T Consensus 112 ~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~-~~~~p~glavD~~~~~lY~~d~------~~~~I~ 184 (400)
T 3p5b_L 112 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR-DIQAPDGLAVDWIHSNIYWTDS------VLGTVS 184 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECS-SCSCEEEEEEETTTTEEEEEET------TTTEEE
T ss_pred CcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeC-CCCCcccEEEEecCCceEEEEC------CCCeEE
Confidence 478899999866655544 33 556667765421 1111110 1234455666664555555543 247888
Q ss_pred EEeCCCCcEEEEee-cCCceEEEEEeC--CeEEEEE---CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEE
Q 022387 160 IWDDHQSRCIGELS-FRSEVRSVKLRR--DRIIVVL---EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVC 233 (298)
Q Consensus 160 iWD~~~~~~~~~~~-~~~~v~~v~~~~--~~l~v~~---~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~ 233 (298)
+.|+........+. .......+++++ ..++++. .+.|...++........+...-.....+++.++.. .++.
T Consensus 185 ~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~-~lY~- 262 (400)
T 3p5b_L 185 VADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSG-RLYW- 262 (400)
T ss_dssp EECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTT-EEEE-
T ss_pred EEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCC-EEEE-
Confidence 88887654433333 223467788875 4555554 25788888754332222222212223455555443 3333
Q ss_pred ecCCCceEEEEEcCCcceEeec---ccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEe
Q 022387 234 PGLQKGQVRVEHYASKRTKFIM---AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQE 296 (298)
Q Consensus 234 sGs~dg~v~i~~~~~~~~~~~~---~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~ 296 (298)
+-...+.|...+++.....++. ..-.....|++. .+.++.+-...+. |..+|..+|+.+.+
T Consensus 263 aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~-V~~~~~~~G~~~~~ 326 (400)
T 3p5b_L 263 VDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEA-IFSANRLTGSDVNL 326 (400)
T ss_dssp EETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCS-EEEEESSSCCCCEE
T ss_pred EECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCe-EEEEEcCCCCceEE
Confidence 3566778888888765444332 123456677773 4567777777778 99999888865543
No 282
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.10 E-value=0.72 Score=41.21 Aligned_cols=190 Identities=7% Similarity=-0.017 Sum_probs=105.0
Q ss_pred EEEEEcCCCCEEEEEcCCeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCCcE
Q 022387 89 LHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRC 168 (298)
Q Consensus 89 ~~v~fs~dg~~lasgs~~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~~ 168 (298)
.|.+..+ ..+|+.+....|+.++++......... .......+.+......+..+.. ..+.|..++......
T Consensus 80 ~C~~~~~-~~~l~~~~~~~I~~i~~~~~~~~~~~~--~~~~~~gl~~d~~~~~ly~~D~------~~~~I~r~~~~g~~~ 150 (386)
T 3v65_B 80 SCKALGP-EPVLLFANRIDIRQVLPHRSEYTLLLN--NLENAIALDFHHRRELVFWSDV------TLDRILRANLNGSNV 150 (386)
T ss_dssp CEEECSS-CCEEEEECBSCEEEECTTSCCCEEEEC--SCSCEEEEEEETTTTEEEEEET------TTTEEEEEETTSCCE
T ss_pred eECCccc-cceeEeecCccceeeccCCCcEEEEec--CCCccEEEEEecCCCeEEEEeC------CCCcEEEEecCCCCc
Confidence 3555555 346666666778877776654433322 1344566777766666666652 347899999877653
Q ss_pred EEEeecC-CceEEEEEe--CCeEEEEEC--CeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEecCCC-ceEE
Q 022387 169 IGELSFR-SEVRSVKLR--RDRIIVVLE--QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQK-GQVR 242 (298)
Q Consensus 169 ~~~~~~~-~~v~~v~~~--~~~l~v~~~--~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs~d-g~v~ 242 (298)
...+... .....+++. ...+.++.. +.|.+.++........+.........+++.+.. +.++. +-..+ +.|.
T Consensus 151 ~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~-g~ly~-td~~~~~~I~ 228 (386)
T 3v65_B 151 EEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPME-GTIYW-TDWGNTPRIE 228 (386)
T ss_dssp EEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTT-TEEEE-EECSSSCEEE
T ss_pred EEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCC-CeEEE-eccCCCCEEE
Confidence 3322221 233445554 456666543 688888875433222222221222334454433 23333 34444 6777
Q ss_pred EEEcCCcceEee-cccccceeEEEECCCCC-EEEEEeCCCCEEEEEECCC
Q 022387 243 VEHYASKRTKFI-MAHDSRIACFALTQDGQ-LLATSSTKGTLVRIFNTLD 290 (298)
Q Consensus 243 i~~~~~~~~~~~-~~H~~~V~~l~fspdg~-~lAt~S~Dgt~IrIWd~~t 290 (298)
..+........+ ...-...+.|+|+|++. ++.+=+..+. |..+|+..
T Consensus 229 r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~-I~~~d~dG 277 (386)
T 3v65_B 229 ASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHV-IERANLDG 277 (386)
T ss_dssp EEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTE-EEEECTTS
T ss_pred EEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCE-EEEEeCCC
Confidence 777766544433 23334588999997654 4555555566 99999764
No 283
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.04 E-value=0.65 Score=40.16 Aligned_cols=198 Identities=9% Similarity=-0.080 Sum_probs=108.3
Q ss_pred CeEEEEEcCCCCEEEEE-cC-CeEEEEEcCC----CceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEE
Q 022387 87 TLLHISFNQDHGCFAAG-TD-HGFRIYNCDP----FREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (298)
Q Consensus 87 ~V~~v~fs~dg~~lasg-s~-~gi~vw~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i 160 (298)
...+++|++++..|... .. +.|..++.+. ......... .......+.+.+....+.++.. ..+.|.+
T Consensus 31 ~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~-~~~~p~glavd~~~~~ly~~d~------~~~~I~~ 103 (316)
T 1ijq_A 31 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR-DIQAPDGLAVDWIHSNIYWTDS------VLGTVSV 103 (316)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECS-SCSCCCEEEEETTTTEEEEEET------TTTEEEE
T ss_pred ceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeC-CCCCcCEEEEeecCCeEEEEEC------CCCEEEE
Confidence 57899999876655544 44 4577777765 111111110 0123345555554455555442 3478999
Q ss_pred EeCCCCcEEEEee-cCCceEEEEEeC--CeEEEEEC---CeEEEEEcCCCeEEEEEec-cCCCcceEEEEeCCCCeEEEE
Q 022387 161 WDDHQSRCIGELS-FRSEVRSVKLRR--DRIIVVLE---QKIFVYNFADLKLLHQIET-IANPKGLCAVSQGVGSLVLVC 233 (298)
Q Consensus 161 WD~~~~~~~~~~~-~~~~v~~v~~~~--~~l~v~~~---~~I~iwd~~~~~~i~~~~~-~~~~~~~~~~s~~~d~~~la~ 233 (298)
.|.........+. .......+++++ ..++++.. +.|..+++.. +....+.. .......+++.++.+ .++.
T Consensus 104 ~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~~~~~~~~~~P~gla~d~~~~-~lY~- 180 (316)
T 1ijq_A 104 ADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTENIQWPNGITLDLLSG-RLYW- 180 (316)
T ss_dssp EETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEEECSSCSCEEEEEEETTTT-EEEE-
T ss_pred EeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeEEEEECCCCCceEEEEeccCC-EEEE-
Confidence 9987544332232 123566777874 45555542 5788887743 32333322 112223445554432 3333
Q ss_pred ecCCCceEEEEEcCCcceEeec---ccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEe
Q 022387 234 PGLQKGQVRVEHYASKRTKFIM---AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQE 296 (298)
Q Consensus 234 sGs~dg~v~i~~~~~~~~~~~~---~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~ 296 (298)
+-+..+.|...++.......+. ..-.....|++. .+.++.+-...+. |..+|..+|+.+++
T Consensus 181 ~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~-V~~~~~~~g~~~~~ 244 (316)
T 1ijq_A 181 VDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEA-IFSANRLTGSDVNL 244 (316)
T ss_dssp EETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTE-EEEEETTTCCCCEE
T ss_pred EECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCe-EEEEeCCCCcceEE
Confidence 3567788988888765444332 123456788885 4667777766777 99999888875543
No 284
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=95.86 E-value=0.076 Score=51.79 Aligned_cols=199 Identities=10% Similarity=-0.058 Sum_probs=102.9
Q ss_pred CeEEEEEcCCCCEEEEEcC--CeEEEEEcCC----CceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEE
Q 022387 87 TLLHISFNQDHGCFAAGTD--HGFRIYNCDP----FREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (298)
Q Consensus 87 ~V~~v~fs~dg~~lasgs~--~gi~vw~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i 160 (298)
.+..++|.+++..|..... +.|+.++++. ......... .......+++.+....++++.. ..+.|.+
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~-~~~~P~glavD~~~g~LY~tD~------~~~~I~v 479 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR-DIQAPDGLAVDWIHSNIYWTDS------VLGTVSV 479 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCS-CC--CCCEECCCSSSBCEECCT------TTSCEEE
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeC-CCCCcceEEEEeeCCcEEEEec------cCCeEEE
Confidence 5667899987766665543 4577777764 111111100 0011222334433333444321 3477899
Q ss_pred EeCCCCcEEEEeec-CCceEEEEEeC--CeEEEEE--C-CeEEEEEcCCCeEEEEEec-cCCCcceEEEEeCCCCeEEEE
Q 022387 161 WDDHQSRCIGELSF-RSEVRSVKLRR--DRIIVVL--E-QKIFVYNFADLKLLHQIET-IANPKGLCAVSQGVGSLVLVC 233 (298)
Q Consensus 161 WD~~~~~~~~~~~~-~~~v~~v~~~~--~~l~v~~--~-~~I~iwd~~~~~~i~~~~~-~~~~~~~~~~s~~~d~~~la~ 233 (298)
.|.........+.. ......+++++ ..++++. . +.|..+++... ....+.. .......++++++....+++
T Consensus 480 ~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~-~~~~l~~~~l~~PnGlavd~~~~~LY~a- 557 (699)
T 1n7d_A 480 ADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENIQWPNGITLDLLSGRLYWV- 557 (699)
T ss_dssp EBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSC-CCCEESCSSCSSCCCEEECTTTCCEEEE-
T ss_pred EecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCC-CeeEEEeCCCCCccEEEEeccCCEEEEE-
Confidence 98876543333222 12345566654 3444433 1 56777666422 2222221 11222345665544333443
Q ss_pred ecCCCceEEEEEcCCcceEeec---ccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 234 PGLQKGQVRVEHYASKRTKFIM---AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 234 sGs~dg~v~i~~~~~~~~~~~~---~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
-...+.|.+.++......++. ..-.....|++..+ .++.+....+. |..+|..+|+.++++
T Consensus 558 -D~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~-V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 558 -DSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEA-IFSANRLTGSDVNLL 621 (699)
T ss_dssp -ETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTC-EEEEETTTEEEEECC
T ss_pred -ecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCe-EEEEEccCCCceEEe
Confidence 566778888887654433332 12234566677654 56666666777 999999888877653
No 285
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=95.67 E-value=0.52 Score=45.25 Aligned_cols=192 Identities=9% Similarity=-0.006 Sum_probs=94.7
Q ss_pred EEEEcC-CCCEEEEEcCC------------eEEEEEcCCCceEEEEeee--cCCceEEEEEecCCCEEEEEeCCCCCCCC
Q 022387 90 HISFNQ-DHGCFAAGTDH------------GFRIYNCDPFREIFRRDFE--RGGGIGVVEMLFRCNILALVGGGPDPQYP 154 (298)
Q Consensus 90 ~v~fs~-dg~~lasgs~~------------gi~vw~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (298)
++++.+ +|++++.|+.+ .+.+||..+.+......+. +......+.+..++..+++ +|. .
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~-GG~-----~ 263 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVT-GGN-----D 263 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEE-CSS-----S
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEe-CCC-----C
Confidence 567777 89988887641 2558888776643222210 1111122333445554444 432 2
Q ss_pred CCeEEEEeCCCCcEEEEeecCC--ceEEEEEe-CCeEEEEEC--------CeEEEEEcCCCeEEEEEec-----cCCCcc
Q 022387 155 LNKVMIWDDHQSRCIGELSFRS--EVRSVKLR-RDRIIVVLE--------QKIFVYNFADLKLLHQIET-----IANPKG 218 (298)
Q Consensus 155 d~~v~iWD~~~~~~~~~~~~~~--~v~~v~~~-~~~l~v~~~--------~~I~iwd~~~~~~i~~~~~-----~~~~~~ 218 (298)
+..+.+||..+++....-.... .-.++... .+.+++.+. +.+.+||..+.+- ..+.. ......
T Consensus 264 ~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W-~~~~~~~~~p~~~~~~ 342 (656)
T 1k3i_A 264 AKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTW-TSLPNAKVNPMLTADK 342 (656)
T ss_dssp TTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEE-EEETTSCSGGGCCCCT
T ss_pred CCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcc-eeCCCccccccccccc
Confidence 3579999998876543222221 12233333 444444432 4799999976652 22210 000000
Q ss_pred eEEEEeCCCCeEEEEecCCCc---------eEEEEEcCCcceE-eecccc---------cceeEEEEC-CCCCEEEEEeC
Q 022387 219 LCAVSQGVGSLVLVCPGLQKG---------QVRVEHYASKRTK-FIMAHD---------SRIACFALT-QDGQLLATSST 278 (298)
Q Consensus 219 ~~~~s~~~d~~~la~sGs~dg---------~v~i~~~~~~~~~-~~~~H~---------~~V~~l~fs-pdg~~lAt~S~ 278 (298)
...+ ..++.++++ |..+| .+.+||.....-. ....+. ..-.++.|. .++++++.|+.
T Consensus 343 ~~~~--~~~~~iyv~-Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~ 419 (656)
T 1k3i_A 343 QGLY--RSDNHAWLF-GWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGS 419 (656)
T ss_dssp TGGG--TTTCSCCEE-ECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCB
T ss_pred ccee--ecCCceEEE-ECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCC
Confidence 0001 112233333 33333 4566776654321 111111 123455554 47899999986
Q ss_pred CC-----------CEEEEEECCCCc
Q 022387 279 KG-----------TLVRIFNTLDGT 292 (298)
Q Consensus 279 Dg-----------t~IrIWd~~tg~ 292 (298)
++ . |.+||..+.+
T Consensus 420 ~~~~~~~~~~~~~~-v~~yd~~~~~ 443 (656)
T 1k3i_A 420 PDYQDSDATTNAHI-ITLGEPGTSP 443 (656)
T ss_dssp SSSSSSBCCCCEEE-EECCSTTSCC
T ss_pred CCCCCCCcCCcceE-EEcCCCCCCC
Confidence 43 4 7888877654
No 286
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=95.60 E-value=1.1 Score=39.40 Aligned_cols=193 Identities=7% Similarity=-0.012 Sum_probs=107.5
Q ss_pred CeEEEEEcCCCCEEEEEcCCeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCC
Q 022387 87 TLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQS 166 (298)
Q Consensus 87 ~V~~v~fs~dg~~lasgs~~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~ 166 (298)
..+|.+..++ .+|..+....|+..+++......... .......+.+......+..+.. ..+.|..++....
T Consensus 35 ~~~C~~~~~~-~~ll~~~~~~I~~i~~~g~~~~~~~~--~~~~~~~l~~d~~~~~ly~~D~------~~~~I~r~~~~g~ 105 (349)
T 3v64_C 35 RRSCKALGPE-PVLLFANRIDIRQVLPHRSEYTLLLN--NLENAIALDFHHRRELVFWSDV------TLDRILRANLNGS 105 (349)
T ss_dssp SSCEEESSSC-CEEEEECBSCEEEECTTSCCEEEEEC--SCSCEEEEEEETTTTEEEEEET------TTTEEEEEETTSC
T ss_pred CCcccccccC-ceeEeecccceEEEeCCCCeeEEeec--CCCceEEEEEeccccEEEEEec------cCCceEEEecCCC
Confidence 3456665663 45666666667777766544332222 1344566677766666766652 3478999998765
Q ss_pred cEEEEeecC-CceEEEEEe--CCeEEEEEC--CeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEecCCC-ce
Q 022387 167 RCIGELSFR-SEVRSVKLR--RDRIIVVLE--QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQK-GQ 240 (298)
Q Consensus 167 ~~~~~~~~~-~~v~~v~~~--~~~l~v~~~--~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs~d-g~ 240 (298)
.....+... .....+++. ...+.++.. +.|.+.++........+.........+++.+.. +.++. +-..+ +.
T Consensus 106 ~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~-g~ly~-td~~~~~~ 183 (349)
T 3v64_C 106 NVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPME-GTIYW-TDWGNTPR 183 (349)
T ss_dssp SCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTT-TEEEE-EECSSSCE
T ss_pred CceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCc-CeEEE-eccCCCCE
Confidence 533322221 234455555 456666543 689999886433222222221222334555432 33443 34444 77
Q ss_pred EEEEEcCCcceEeec-ccccceeEEEECCCCC-EEEEEeCCCCEEEEEECCCC
Q 022387 241 VRVEHYASKRTKFIM-AHDSRIACFALTQDGQ-LLATSSTKGTLVRIFNTLDG 291 (298)
Q Consensus 241 v~i~~~~~~~~~~~~-~H~~~V~~l~fspdg~-~lAt~S~Dgt~IrIWd~~tg 291 (298)
|...+++......+. ..-...+.|+|+|++. ++.+=+..+. |..+|+...
T Consensus 184 I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~-I~~~~~dG~ 235 (349)
T 3v64_C 184 IEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHV-IERANLDGS 235 (349)
T ss_dssp EEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTE-EEEEETTSC
T ss_pred EEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCE-EEEEeCCCC
Confidence 877777665444332 2334589999998654 4555455566 999997643
No 287
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=95.44 E-value=1.2 Score=38.73 Aligned_cols=196 Identities=9% Similarity=-0.031 Sum_probs=108.2
Q ss_pred CeEEEEEcCCCCEEE-EEcC-CeEEEEEcCCCc---eEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEE
Q 022387 87 TLLHISFNQDHGCFA-AGTD-HGFRIYNCDPFR---EIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIW 161 (298)
Q Consensus 87 ~V~~v~fs~dg~~la-sgs~-~gi~vw~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iW 161 (298)
.+.+++|.+.+..|. +-.. +.|..++.+... .+.... ......+.+.+....+..+.. ..+.|.+.
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~---l~~p~glavd~~~g~ly~~d~------~~~~I~~~ 106 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSG---LLSPDGLACDWLGEKLYWTDS------ETNRIEVS 106 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEEC---CSCCCEEEEETTTTEEEEEET------TTTEEEEE
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCC---CCCccEEEEEcCCCeEEEEEC------CCCEEEEE
Confidence 467889998655444 4444 446677776542 111111 123344555554555555542 24778899
Q ss_pred eCCCCcEEEEe-ecCCceEEEEEeC--CeEEEEE---CCeEEEEEcCCCeEEEEEe-ccCCCcceEEEEeCCCCeEEEEe
Q 022387 162 DDHQSRCIGEL-SFRSEVRSVKLRR--DRIIVVL---EQKIFVYNFADLKLLHQIE-TIANPKGLCAVSQGVGSLVLVCP 234 (298)
Q Consensus 162 D~~~~~~~~~~-~~~~~v~~v~~~~--~~l~v~~---~~~I~iwd~~~~~~i~~~~-~~~~~~~~~~~s~~~d~~~la~s 234 (298)
+.........+ ........+++++ ..++++. .+.|..+++.... ...+. ..-..-..++++++.. .++. +
T Consensus 107 ~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~~~l~~Pnglavd~~~~-~lY~-a 183 (318)
T 3sov_A 107 NLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS-RFIIINSEIYWPNGLTLDYEEQ-KLYW-A 183 (318)
T ss_dssp ETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS-CEEEECSSCSCEEEEEEETTTT-EEEE-E
T ss_pred ECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC-eEEEEECCCCCccEEEEeccCC-EEEE-E
Confidence 88654322222 2223456777764 4555554 2578888774322 22332 1111223445554433 3333 3
Q ss_pred cCCCceEEEEEcCCcceEe-ecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEe
Q 022387 235 GLQKGQVRVEHYASKRTKF-IMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQE 296 (298)
Q Consensus 235 Gs~dg~v~i~~~~~~~~~~-~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~ 296 (298)
-+..+.|...++....... +.........|++.. +.++.+-...+. |..++..+|+.+++
T Consensus 184 D~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~-V~~~~~~~G~~~~~ 244 (318)
T 3sov_A 184 DAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHS-ILACNKYTGEGLRE 244 (318)
T ss_dssp ETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTE-EEEEETTTCCSCEE
T ss_pred ECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCe-EEEEECCCCCceEE
Confidence 5677888888887554333 333445677888864 456666656666 99999988875443
No 288
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=95.08 E-value=1.8 Score=38.83 Aligned_cols=184 Identities=7% Similarity=-0.094 Sum_probs=103.7
Q ss_pred CEEEEEcCCeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCC----cEEEEee
Q 022387 98 GCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQS----RCIGELS 173 (298)
Q Consensus 98 ~~lasgs~~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~----~~~~~~~ 173 (298)
.+|+.+....|+..+++......... .......+++......+..+.. ..+.|+.++.... .....+.
T Consensus 84 ~~ll~~~~~~I~~i~l~~~~~~~~~~--~~~~~~~l~~d~~~~~lywsD~------~~~~I~~~~~~g~~~~~~~~~~~~ 155 (400)
T 3p5b_L 84 AYLFFTNRHEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDL------SQRMICSTQLDRAHGVSSYDTVIS 155 (400)
T ss_dssp CEEEEEETTEEEEECTTSCSCEEEEC--SCSCEEEEEEETTTTEEEEEET------TTTEEEEEEC------CCCEEEEC
T ss_pred ceeEEeccceeEEEccCCcceeEecc--ccCcceEEeeeeccCceEEEec------CCCeEEEEEcccCCCCCcceEEEe
Confidence 46777777888888887665433332 2455667777776677776653 3477888888652 1222222
Q ss_pred -cCCceEEEEEe--CCeEEEEEC--CeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEecCCCceEEEEEcCC
Q 022387 174 -FRSEVRSVKLR--RDRIIVVLE--QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYAS 248 (298)
Q Consensus 174 -~~~~v~~v~~~--~~~l~v~~~--~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~ 248 (298)
.......+++. ...+.++.. +.|.+.++........+.........+++.+.. +.++.+-....+.|...+++.
T Consensus 156 ~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~-g~ly~td~~~~~~I~~~~~dG 234 (400)
T 3p5b_L 156 RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVH-GFMYWTDWGTPAKIKKGGLNG 234 (400)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTT-TEEEEEECSSSCCEEEEETTS
T ss_pred CCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEeccc-CeEEEEeCCCCCEEEEEeCCC
Confidence 12345556665 456666643 688888886544333333222222344554432 334432122346777777766
Q ss_pred cceEee-cccccceeEEEECCCCCEEEEE-eCCCCEEEEEECCCC
Q 022387 249 KRTKFI-MAHDSRIACFALTQDGQLLATS-STKGTLVRIFNTLDG 291 (298)
Q Consensus 249 ~~~~~~-~~H~~~V~~l~fspdg~~lAt~-S~Dgt~IrIWd~~tg 291 (298)
.....+ ...-...+.|++++++..|.-+ +..+. |..+|+...
T Consensus 235 ~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~-I~~~d~dG~ 278 (400)
T 3p5b_L 235 VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS-ISSIDVNGG 278 (400)
T ss_dssp CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTE-EEEEETTSC
T ss_pred CccEEEEECCCCceEEEEEEeCCCEEEEEECCCCE-EEEEeCCCC
Confidence 544433 3333568999999876555544 44556 999998643
No 289
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=95.07 E-value=2.9 Score=41.22 Aligned_cols=182 Identities=7% Similarity=-0.085 Sum_probs=99.3
Q ss_pred EEEEEcCCeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCC----cEEEEee-
Q 022387 99 CFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQS----RCIGELS- 173 (298)
Q Consensus 99 ~lasgs~~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~----~~~~~~~- 173 (298)
+|+......|+..+++......... .......+.+......++++.. ..+.|+.+++... .....+.
T Consensus 397 ~Ll~an~~~Ir~i~l~~~~~~~l~~--~~~~~~gl~~d~~~~~lY~sD~------~~~~I~~~~l~g~~~~~~~~~vi~~ 468 (791)
T 3m0c_C 397 YLFFTNRHEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDL------SQRMICSTQLDRAHGVSSYDTVISR 468 (791)
T ss_dssp EEEEECBSSEEEECTTSCCCEEEEC--SCSSEEEEEEETTTTEEEEEET------TTTEEEEEEC--------CEEEECS
T ss_pred ccccccccceeEeeccCCcceeeec--CCCceEEEeecccCCeeEEeec------cceeEEEEeccCCCCCcceeEEEec
Confidence 5666666777777776554332222 1345556667666666666653 3477888887652 1122222
Q ss_pred cCCceEEEEEe--CCeEEEEEC--CeEEEEEcCCCeEEEEEe-ccCCCcceEEEEeCCCCeEEEEecCCCceEEEEEcCC
Q 022387 174 FRSEVRSVKLR--RDRIIVVLE--QKIFVYNFADLKLLHQIE-TIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYAS 248 (298)
Q Consensus 174 ~~~~v~~v~~~--~~~l~v~~~--~~I~iwd~~~~~~i~~~~-~~~~~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~ 248 (298)
.......|++. ...|+++.. +.|.+.++..... .++. ........+++.+.. +.++.+--...+.|...++..
T Consensus 469 ~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~-~~l~~~~l~~P~gIaVDp~~-g~LYwtD~g~~~~I~~~~~dG 546 (791)
T 3m0c_C 469 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR-KTLFRENGSKPRAIVVDPVH-GFMYWTDWGTPAKIKKGGLNG 546 (791)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSE-EEEEECTTCCEEEEEEETTT-TEEEEEECSSSCEEEEEETTS
T ss_pred CCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeE-EEEEeCCCCCcceEEEecCC-CCEEEecCCCCCeEEEEecCC
Confidence 11234445554 456776653 6899999864433 3332 222223345555443 234332112236788777776
Q ss_pred cceEee-cccccceeEEEECCCCCEE-EEEeCCCCEEEEEECCCC
Q 022387 249 KRTKFI-MAHDSRIACFALTQDGQLL-ATSSTKGTLVRIFNTLDG 291 (298)
Q Consensus 249 ~~~~~~-~~H~~~V~~l~fspdg~~l-At~S~Dgt~IrIWd~~tg 291 (298)
....++ ...-...+.|++++.+..| .+=...+. |...++...
T Consensus 547 ~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~-I~~~d~dG~ 590 (791)
T 3m0c_C 547 VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS-ISSIDVNGG 590 (791)
T ss_dssp CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTE-EEEEETTSC
T ss_pred CceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCc-EEEEecCCC
Confidence 655443 3333578999999765444 44444555 889987643
No 290
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=94.99 E-value=3.1 Score=41.05 Aligned_cols=198 Identities=9% Similarity=-0.064 Sum_probs=106.9
Q ss_pred CCeEEEEEcCCCCEEE-EEcC-CeEEEEEcCCCc----eEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEE
Q 022387 86 PTLLHISFNQDHGCFA-AGTD-HGFRIYNCDPFR----EIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (298)
Q Consensus 86 ~~V~~v~fs~dg~~la-sgs~-~gi~vw~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~ 159 (298)
..+..++|.+.+..|. +-.. +.|+.++++... ....... .......+++.+....++++.. ..+.|.
T Consensus 424 ~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~-~l~~P~GLAvD~~~~~LY~tD~------~~~~I~ 496 (791)
T 3m0c_C 424 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR-DIQAPDGLAVDWIHSNIYWTDS------VLGTVS 496 (791)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECS-SCSCCCEEEEETTTTEEEEEET------TTTEEE
T ss_pred CceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEec-CCCCcceeeeeecCCcEEEEec------CCCeEE
Confidence 3577888988555444 4333 446666665421 1111110 1233445666666656666553 347899
Q ss_pred EEeCCCCcEEEEee-cCCceEEEEEeC--CeEEEEEC---CeEEEEEcCCCeEEEEEec-cCCCcceEEEEeCCCCeEEE
Q 022387 160 IWDDHQSRCIGELS-FRSEVRSVKLRR--DRIIVVLE---QKIFVYNFADLKLLHQIET-IANPKGLCAVSQGVGSLVLV 232 (298)
Q Consensus 160 iWD~~~~~~~~~~~-~~~~v~~v~~~~--~~l~v~~~---~~I~iwd~~~~~~i~~~~~-~~~~~~~~~~s~~~d~~~la 232 (298)
+.++........+. .......|++++ ..|+++.. +.|...++..... ..+.. .......+++.+... .+++
T Consensus 497 v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~-~~lv~~~l~~P~GLavD~~~~-~LYw 574 (791)
T 3m0c_C 497 VADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVTENIQWPNGITLDLLSG-RLYW 574 (791)
T ss_dssp EEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE-EEEECSSCSCEEEEEEETTTT-EEEE
T ss_pred EEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCce-EEEEeCCCCCceEEEEecCCC-eEEE
Confidence 99987554333332 223567788875 45666542 5788888754433 33322 212233455554433 3333
Q ss_pred EecCCCceEEEEEcCCcceEee-cc--cccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE
Q 022387 233 CPGLQKGQVRVEHYASKRTKFI-MA--HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQ 295 (298)
Q Consensus 233 ~sGs~dg~v~i~~~~~~~~~~~-~~--H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~ 295 (298)
+-...+.|...++......++ .. .-.....|++.. ++++.+-...+. |...|..+|+.+.
T Consensus 575 -aD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~-I~~~dk~tG~~~~ 637 (791)
T 3m0c_C 575 -VDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEA-IFSANRLTGSDVN 637 (791)
T ss_dssp -EETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTE-EEEEETTTCCCCE
T ss_pred -EeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCE-EEEEeCCCCcceE
Confidence 355667888888876554433 22 223456777743 356666666666 8888888876543
No 291
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=94.74 E-value=2.1 Score=37.91 Aligned_cols=131 Identities=11% Similarity=0.131 Sum_probs=80.6
Q ss_pred CCeEEEEeCCCCcEEEEeecCCceEEEEEeCCe--------EEEEE-----CCeEEEEEcC-CCeEEEEEe-------cc
Q 022387 155 LNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDR--------IIVVL-----EQKIFVYNFA-DLKLLHQIE-------TI 213 (298)
Q Consensus 155 d~~v~iWD~~~~~~~~~~~~~~~v~~v~~~~~~--------l~v~~-----~~~I~iwd~~-~~~~i~~~~-------~~ 213 (298)
.+.+.++|+ +++.++.+.. ..+..+..-+.+ +++++ .++|.+|++. ..+.+..+. +.
T Consensus 49 ~~gL~Vydl-~G~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~ 126 (355)
T 3amr_A 49 KSGLVVYSL-DGKMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATA 126 (355)
T ss_dssp TTEEEEEET-TSCEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEECC
T ss_pred CCCEEEEcC-CCcEEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccccccCcCCC
Confidence 366999999 8888887765 456666654433 34443 3689999883 333345542 11
Q ss_pred -CCCcceEEEEeCCCCeEEEEecCCCceEEEEEcCC---c-----ceEeecccccceeEEEECCCCCEEEEEeCCCCEEE
Q 022387 214 -ANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYAS---K-----RTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVR 284 (298)
Q Consensus 214 -~~~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~---~-----~~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~Ir 284 (298)
..+.+.|.+.....+.+.++....+|.+..|++.. . .+.+|.- .+.+..|+..+....|..+-+|.. |.
T Consensus 127 ~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~eEd~G-Iw 204 (355)
T 3amr_A 127 INEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYIAEEDEA-IW 204 (355)
T ss_dssp CSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEEEETTTE-EE
T ss_pred CCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEEEecccce-EE
Confidence 34455555543323443333467789988887732 1 1233332 357888999988888888888866 65
Q ss_pred EEECC
Q 022387 285 IFNTL 289 (298)
Q Consensus 285 IWd~~ 289 (298)
.++.+
T Consensus 205 ~~da~ 209 (355)
T 3amr_A 205 KFSAE 209 (355)
T ss_dssp EEECS
T ss_pred EEeCC
Confidence 66644
No 292
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=94.40 E-value=0.83 Score=41.62 Aligned_cols=106 Identities=14% Similarity=0.117 Sum_probs=67.3
Q ss_pred EEeCCeEEEEECCeEEEEEcCCCeEEEEEeccC--CCcceEEEEeCCCCeEEEEecCCCceEEEEEcC----Cc------
Q 022387 182 KLRRDRIIVVLEQKIFVYNFADLKLLHQIETIA--NPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYA----SK------ 249 (298)
Q Consensus 182 ~~~~~~l~v~~~~~I~iwd~~~~~~i~~~~~~~--~~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~----~~------ 249 (298)
+-+...++++.++.||.-++......+.++... .-..+..+..+++|.+||+.|. ..|.|-.+- ..
T Consensus 29 ~~n~t~i~~a~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~--~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 29 SQNGTRIVFIQDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND--NEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp ETTTTEEEEEETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS--SEEEEEECCTTCSCCCCHHHH
T ss_pred EcCCCEEEEEECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC--CeEEEEEecCccccCcccccc
Confidence 345667888889999999987544455565532 1112333444556689998554 345553322 11
Q ss_pred -c--eEeecc------cccceeEEEECCC---CCEEEEEeCCCCEEEEEECCC
Q 022387 250 -R--TKFIMA------HDSRIACFALTQD---GQLLATSSTKGTLVRIFNTLD 290 (298)
Q Consensus 250 -~--~~~~~~------H~~~V~~l~fspd---g~~lAt~S~Dgt~IrIWd~~t 290 (298)
+ ...+.- ...+|..+-|+|- |..|++--.|++ ||+||+..
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~-Ir~yDl~~ 158 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDT-ITMFDILN 158 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSC-EEEEETTC
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCE-EEEEEccc
Confidence 1 112221 2467999999996 457888888999 99999986
No 293
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=93.92 E-value=4.9 Score=38.95 Aligned_cols=190 Identities=14% Similarity=0.170 Sum_probs=103.9
Q ss_pred CCCeEEEEEcCCCCEEEEEcCCeEEEEEcCCCceEEEE-eeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeC
Q 022387 85 PPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRR-DFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (298)
Q Consensus 85 ~~~V~~v~fs~dg~~lasgs~~gi~vw~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~ 163 (298)
.+.|++|.-..+|.+ =.|+.+|+..||-...+..... .. ....+..+....++ .+-+++ .+-+..+|.
T Consensus 21 ~n~V~~I~qD~~G~l-WigT~~GL~ryDG~~~~~~~~~~~~-~~~~i~~i~~d~~g-~lWigT--------~~Gl~~yd~ 89 (758)
T 3ott_A 21 ASVVSCFLQDSEGLI-WIGSNKGLFSYDGYSTQQHFTYGEN-NNTRIYCGVIIDNT-YLYMGT--------DNGILVYNY 89 (758)
T ss_dssp CCCEEEEEECTTSCE-EEEESSCEEEECSSCEEECSCTTST-TSSCEEEEEEETTT-EEEEEE--------TTEEEEEET
T ss_pred cceEEEEEECCCCCE-EEEECCCccccCCCceEEEEccCCC-CCceEEEEEEcCCC-cEEEEe--------CCCeEEEeC
Confidence 457999998888863 3455788877764322110000 00 11234433333333 333433 234788998
Q ss_pred CCCcEEEEee-cCCceEEEEEeCCeEEEEECCeEEEEEcCCCeEEEEEec---cCCCcceEEEEeCCCCeEEEEecCCCc
Q 022387 164 HQSRCIGELS-FRSEVRSVKLRRDRIIVVLEQKIFVYNFADLKLLHQIET---IANPKGLCAVSQGVGSLVLVCPGLQKG 239 (298)
Q Consensus 164 ~~~~~~~~~~-~~~~v~~v~~~~~~l~v~~~~~I~iwd~~~~~~i~~~~~---~~~~~~~~~~s~~~d~~~la~sGs~dg 239 (298)
.+.+...... ....|.++......+.+++.+.+..||..+.+. ..+.. ......+.++..+.++.+.+ |+.+|
T Consensus 90 ~~~~f~~~~~~~~~~i~~i~~~~g~lWigt~~Gl~~~~~~~~~~-~~~~~~~~~l~~~~i~~i~~d~~g~lWi--gt~~G 166 (758)
T 3ott_A 90 RADRYEQPETDFPTDVRTMALQGDTLWLGALNGLYTYQLQSRKL-TSFDTRRNGLPNNTIYSIIRTKDNQIYV--GTYNG 166 (758)
T ss_dssp TTTEECCCSCCCCSCEEEEEEETTEEEEEETTEEEEEETTTCCE-EEECHHHHCCSCSCEEEEEECTTCCEEE--EETTE
T ss_pred CCCEEECcccCCCceEEEEEecCCcEEEEcCCcceeEeCCCCeE-EEeccCCCCcCCCeEEEEEEcCCCCEEE--EeCCC
Confidence 7754322111 123466666667788888888899999876543 33421 11112345666676667666 44555
Q ss_pred eEEEEEcCCcceEeec--cc----ccceeEEEECCCCC--EEEEEeCCCCEEEEEECCCCcE
Q 022387 240 QVRVEHYASKRTKFIM--AH----DSRIACFALTQDGQ--LLATSSTKGTLVRIFNTLDGTL 293 (298)
Q Consensus 240 ~v~i~~~~~~~~~~~~--~H----~~~V~~l~fspdg~--~lAt~S~Dgt~IrIWd~~tg~~ 293 (298)
+..++...+....+. .. ...|++|....++. +++| ++. +..+|..+++.
T Consensus 167 -l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt---~~G-l~~~~~~~~~~ 223 (758)
T 3ott_A 167 -LCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGT---EGY-LFQYFPSTGQI 223 (758)
T ss_dssp -EEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEE---EEE-EEEEETTTTEE
T ss_pred -HhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEE---CCC-CeEEcCCCCeE
Confidence 445565544433221 11 23488998888765 4444 245 77888777643
No 294
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=93.90 E-value=6.7 Score=40.41 Aligned_cols=187 Identities=16% Similarity=0.178 Sum_probs=98.4
Q ss_pred CCeEEEE---EcCC-CCEEEEEc----------CCe-EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCC
Q 022387 86 PTLLHIS---FNQD-HGCFAAGT----------DHG-FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPD 150 (298)
Q Consensus 86 ~~V~~v~---fs~d-g~~lasgs----------~~g-i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (298)
..+.|++ |..+ ..+|++|. .+| +.+|++...+.....+...++.+..++- +.+.+++..+
T Consensus 829 E~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~-~~g~Lla~ig---- 903 (1158)
T 3ei3_A 829 EYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVE-FNGKLLASIN---- 903 (1158)
T ss_dssp EEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCEEEEEE-ETTEEEEEET----
T ss_pred cceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcCEEEee-eCCEEEEEcC----
Confidence 3444444 4433 46899887 235 6788886444332222112566665553 4555444444
Q ss_pred CCCCCCeEEEEeCCCCcEEE-EeecCCceE--EEEEeCCeEEEEEC-CeEEE--EEcCCCeEEEEEeccCCCcceEEEEe
Q 022387 151 PQYPLNKVMIWDDHQSRCIG-ELSFRSEVR--SVKLRRDRIIVVLE-QKIFV--YNFADLKLLHQIETIANPKGLCAVSQ 224 (298)
Q Consensus 151 ~~~~d~~v~iWD~~~~~~~~-~~~~~~~v~--~v~~~~~~l~v~~~-~~I~i--wd~~~~~~i~~~~~~~~~~~~~~~s~ 224 (298)
++|++||+...+.++ +......+. .+....++++++.- +.|.+ |+-...+ +..+.....+..+.+...
T Consensus 904 -----~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~-L~~~a~D~~~~~vta~~~ 977 (1158)
T 3ei3_A 904 -----STVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGN-FEEIARDFNPNWMSAVEI 977 (1158)
T ss_dssp -----TEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTE-EEEEEECCSCBCEEEEEE
T ss_pred -----CEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCe-EEEEEeecccccEEEEEE
Confidence 789999998765443 222222233 45455676666643 45555 4444333 344444555555554444
Q ss_pred CCCCeEEEEecCCCceEEEEEcCCc--------ceE-eecccc-cceeEEE---ECCCC---------CEEEEEeCCCCE
Q 022387 225 GVGSLVLVCPGLQKGQVRVEHYASK--------RTK-FIMAHD-SRIACFA---LTQDG---------QLLATSSTKGTL 282 (298)
Q Consensus 225 ~~d~~~la~sGs~dg~v~i~~~~~~--------~~~-~~~~H~-~~V~~l~---fspdg---------~~lAt~S~Dgt~ 282 (298)
=.+..+++ +..+|.+.+...... ++. .-.-|- ..|+++. +.+.+ ..+.-++.+|+
T Consensus 978 ld~~t~l~--aD~~gNl~vl~~~~~~~~~~~~~~L~~~~~fhlG~~vt~~~~~sl~~~~~~~~~~~~~~~il~~T~~Gs- 1054 (1158)
T 3ei3_A 978 LDDDNFLG--AENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGM- 1054 (1158)
T ss_dssp EETTEEEE--EETTSEEEEEEECTTCCSTTGGGBEEEEEEEECSSCEEEEEECCSCCC-------CEEEEEEEEETTSC-
T ss_pred EccCcEEE--EcCCCcEEEEecCCCCCCccccceeeeEEEEeCCCcEeeEEeeeeecCCCccccccccceEEEEecCCE-
Confidence 22335554 689999998554431 111 112233 3577775 33322 23555667888
Q ss_pred EEEE
Q 022387 283 VRIF 286 (298)
Q Consensus 283 IrIW 286 (298)
|-+.
T Consensus 1055 Ig~l 1058 (1158)
T 3ei3_A 1055 IGLV 1058 (1158)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5443
No 295
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=93.70 E-value=0.89 Score=47.63 Aligned_cols=192 Identities=11% Similarity=0.169 Sum_probs=107.3
Q ss_pred EEEcCCCCEEEEEcCCeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCC-cEE
Q 022387 91 ISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQS-RCI 169 (298)
Q Consensus 91 v~fs~dg~~lasgs~~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~-~~~ 169 (298)
.-.+|..+.||.-....++|||+++...+....+ ...+..+.|. +.+.+++++ +..|..|++... ...
T Consensus 71 AIMnP~~~iiALrag~~lQiFnl~~k~klks~~~--~e~VvfWkWi-s~~~l~lVT--------~~aVyHW~~~~~s~P~ 139 (1630)
T 1xi4_A 71 AIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTM--TDDVTFWKWI-SLNTVALVT--------DNAVYHWSMEGESQPV 139 (1630)
T ss_pred hccCCCcceEEEecCCeEEEeehHHhhhhccccc--CCCceEEEec-CCCeeEEEc--------CCeEEEeccCCCCccH
Confidence 4467777888877777899999999887766665 4566666665 456778877 466999998642 222
Q ss_pred EEeec-----CCceEEEEEeCC--eEEEEE--------CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCC-CeEEEE
Q 022387 170 GELSF-----RSEVRSVKLRRD--RIIVVL--------EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVG-SLVLVC 233 (298)
Q Consensus 170 ~~~~~-----~~~v~~v~~~~~--~l~v~~--------~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d-~~~la~ 233 (298)
.-+.- ...|.....+++ .+++.+ .|.+.+|....... +.+.+|........+...+. ..++++
T Consensus 140 k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~s-Q~iegha~~F~~~~~~~~~~~~~l~~f 218 (1630)
T 1xi4_A 140 KMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPIEGHAASFAQFKMEGNAEESTLFCF 218 (1630)
T ss_pred HHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccc-hhhhHhHhhhheeccCCCCCCceEEEE
Confidence 21211 124444444443 233221 27889998854322 23344433222222211111 122222
Q ss_pred e--cCCCceEEEEEcCCc----c------eEe-ec--ccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE
Q 022387 234 P--GLQKGQVRVEHYASK----R------TKF-IM--AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQ 295 (298)
Q Consensus 234 s--Gs~dg~v~i~~~~~~----~------~~~-~~--~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~ 295 (298)
+ ....|.+.|-++... + ... +. +-..-..+|..|+....+-.-..-|- |.++|+.||.++.
T Consensus 219 ~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~-~~~~d~~t~~~i~ 294 (1630)
T 1xi4_A 219 AVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGY-IHLYDLETGTCIY 294 (1630)
T ss_pred EEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCce-EEEEecccchhhh
Confidence 1 111257777555322 1 111 11 11233566777777666666667888 9999999999874
No 296
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=93.51 E-value=3.4 Score=35.73 Aligned_cols=182 Identities=7% Similarity=-0.028 Sum_probs=97.0
Q ss_pred EEEEEcCCeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCCcE---EEEeecC
Q 022387 99 CFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRC---IGELSFR 175 (298)
Q Consensus 99 ~lasgs~~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~~---~~~~~~~ 175 (298)
+|+.+....|+.++++..................+.+......+..+.. ..+.|..++...+.. +..-..
T Consensus 6 ~ll~~~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~------~~~~I~r~~~~g~~~~~~~~~~~l- 78 (318)
T 3sov_A 6 LLLYANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDV------SEEAIKRTEFNKTESVQNVVVSGL- 78 (318)
T ss_dssp EEEEECEEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEET------TTTEEEEEETTSSSCCCEEEEECC-
T ss_pred EEEEEccCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEEC------CCCcEEEEEccCCCceEEEEcCCC-
Confidence 5666666778888887653111111101123445566665566666652 347899998876531 211111
Q ss_pred CceEEEEEe--CCeEEEEE--CCeEEEEEcCCCeEEEEEe-ccCCCcceEEEEeCCCCeEEEEecCCCceEEEEEcCCcc
Q 022387 176 SEVRSVKLR--RDRIIVVL--EQKIFVYNFADLKLLHQIE-TIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR 250 (298)
Q Consensus 176 ~~v~~v~~~--~~~l~v~~--~~~I~iwd~~~~~~i~~~~-~~~~~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~~ 250 (298)
.....+++. ...+.++. .+.|.++++..... ..+. ........+++.+.. +.++.+--...+.|...+.+...
T Consensus 79 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~-~~l~~~~~~~P~giavdp~~-g~ly~td~~~~~~I~r~~~dG~~ 156 (318)
T 3sov_A 79 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR-KVLFWQELDQPRAIALDPSS-GFMYWTDWGEVPKIERAGMDGSS 156 (318)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSSEEEEEEEGGG-TEEEEEECSSSCEEEEEETTSCS
T ss_pred CCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcE-EEEEeCCCCCccEEEEeCCC-CEEEEEecCCCCEEEEEEcCCCC
Confidence 234445554 45566654 36899999854322 2222 221222344555432 23443211235677777776544
Q ss_pred eEee-cccccceeEEEECCCCC-EEEEEeCCCCEEEEEECCC
Q 022387 251 TKFI-MAHDSRIACFALTQDGQ-LLATSSTKGTLVRIFNTLD 290 (298)
Q Consensus 251 ~~~~-~~H~~~V~~l~fspdg~-~lAt~S~Dgt~IrIWd~~t 290 (298)
...+ ..--...+.|+|++++. ++.+=+..+. |..+|+..
T Consensus 157 ~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~-I~~~d~dG 197 (318)
T 3sov_A 157 RFIIINSEIYWPNGLTLDYEEQKLYWADAKLNF-IHKSNLDG 197 (318)
T ss_dssp CEEEECSSCSCEEEEEEETTTTEEEEEETTTTE-EEEEETTS
T ss_pred eEEEEECCCCCccEEEEeccCCEEEEEECCCCE-EEEEcCCC
Confidence 3333 22234578999998655 4444455566 99999863
No 297
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=93.25 E-value=5.9 Score=37.76 Aligned_cols=198 Identities=9% Similarity=-0.066 Sum_probs=105.1
Q ss_pred CCeEEEEEcCCCCEEEEEc-C-CeEEEEEcCCCce-EEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEe
Q 022387 86 PTLLHISFNQDHGCFAAGT-D-HGFRIYNCDPFRE-IFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWD 162 (298)
Q Consensus 86 ~~V~~v~fs~dg~~lasgs-~-~gi~vw~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD 162 (298)
.....++|++.+..|.... . +.|..++++.... ...... .......+++.+..+.+..+.. ..+.|.+.|
T Consensus 40 ~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~-~~~~P~GlAvD~~~~~ly~~d~------~~~~I~v~~ 112 (619)
T 3s94_A 40 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVS-GLLSPDGLACDWLGEKLYWTDS------ETNRIEVSN 112 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECS-SCSCEEEEEEETTTTEEEEEET------TTTEEEEEE
T ss_pred CceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeC-CCCCcCeEEEEecCCEEEEEeC------CCCEEEEEE
Confidence 3678999998776665544 3 4466677664421 111111 1145566777776666666553 347899999
Q ss_pred CCCCcEEEEe-ecCCceEEEEEeC--CeEEEEE---CCeEEEEEcCCCeEEEEEe-ccCCCcceEEEEeCCCCeEEEEec
Q 022387 163 DHQSRCIGEL-SFRSEVRSVKLRR--DRIIVVL---EQKIFVYNFADLKLLHQIE-TIANPKGLCAVSQGVGSLVLVCPG 235 (298)
Q Consensus 163 ~~~~~~~~~~-~~~~~v~~v~~~~--~~l~v~~---~~~I~iwd~~~~~~i~~~~-~~~~~~~~~~~s~~~d~~~la~sG 235 (298)
.........+ ..-.....+++++ ..+++.. ...|...++.... ...+. .....-..+++.++.+ .++. +-
T Consensus 113 ~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~-~~~l~~~~~~~P~Glald~~~~-~LY~-aD 189 (619)
T 3s94_A 113 LDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS-RFIIINSEIYWPNGLTLDYEEQ-KLYW-AD 189 (619)
T ss_dssp TTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEEEECSSCSSEEEEEEETTTT-EEEE-EE
T ss_pred CCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCc-eEEEEeCCCCCCcEEEEEccCC-EEEE-Ee
Confidence 8764332222 1223455677765 3455554 2466666654322 22222 1111223345554432 3333 35
Q ss_pred CCCceEEEEEcCCcceEee-cccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE
Q 022387 236 LQKGQVRVEHYASKRTKFI-MAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQ 295 (298)
Q Consensus 236 s~dg~v~i~~~~~~~~~~~-~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~ 295 (298)
...+.|...++.......+ .+.-.....|++..+ .++.|-...+. |...|..+|+.+.
T Consensus 190 ~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~-V~~~d~~tg~~~~ 248 (619)
T 3s94_A 190 AKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHS-ILACNKYTGEGLR 248 (619)
T ss_dssp TTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECTTTCS-EEEEESSSCCCCE
T ss_pred CCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCE-EEEEECCCCcccE
Confidence 6667788877766443322 222334567888776 66666666778 9999998887543
No 298
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=93.16 E-value=5.4 Score=37.02 Aligned_cols=198 Identities=8% Similarity=-0.055 Sum_probs=105.5
Q ss_pred CCeEEEEE-------cCCCCEEEEEcCCe--------EEEEEcCC-Cce------EEEEeeecCCceEEEEEecCCCEEE
Q 022387 86 PTLLHISF-------NQDHGCFAAGTDHG--------FRIYNCDP-FRE------IFRRDFERGGGIGVVEMLFRCNILA 143 (298)
Q Consensus 86 ~~V~~v~f-------s~dg~~lasgs~~g--------i~vw~~~~-~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (298)
.....|+| +++|++|.++...+ +.+++... +.. .....+ .+. ..+.+.+....|.
T Consensus 186 ~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~--~~p-~giavdp~~g~LY 262 (496)
T 3kya_A 186 NRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY--KQC-NGATIHPINGELY 262 (496)
T ss_dssp SBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE--SCC-CCEEECTTTCCEE
T ss_pred CCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccC--CCc-eEEEEcCCCCeEE
Confidence 35899999 99999766665432 33443333 111 111122 222 2334455444555
Q ss_pred EEeCCCCCCCCCCeEEEEeCC-------CCcE-----------EEE-eec--CCceEEEEEeCCe--EEEEE--CCeEEE
Q 022387 144 LVGGGPDPQYPLNKVMIWDDH-------QSRC-----------IGE-LSF--RSEVRSVKLRRDR--IIVVL--EQKIFV 198 (298)
Q Consensus 144 ~~~~~~~~~~~d~~v~iWD~~-------~~~~-----------~~~-~~~--~~~v~~v~~~~~~--l~v~~--~~~I~i 198 (298)
++.. ..+.|..+|+. ++.. ... +.. ......++++++. +.++. .+.|+.
T Consensus 263 vtd~------~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~k 336 (496)
T 3kya_A 263 FNSY------EKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMR 336 (496)
T ss_dssp EEET------TTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred EEEC------CCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEE
Confidence 5442 35789999987 4443 112 222 2345788898753 55654 368888
Q ss_pred EEc--CCCeE--EEEEecc----------------CCCcceEEEEeC-----CCCeEEEEecCCCceEEEEEcCCcceEe
Q 022387 199 YNF--ADLKL--LHQIETI----------------ANPKGLCAVSQG-----VGSLVLVCPGLQKGQVRVEHYASKRTKF 253 (298)
Q Consensus 199 wd~--~~~~~--i~~~~~~----------------~~~~~~~~~s~~-----~d~~~la~sGs~dg~v~i~~~~~~~~~~ 253 (298)
++. ..... ..++.+. ..|...+++... .++.+++ +-..+..|+..+.+ ..+.+
T Consensus 337 id~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyV-aD~~N~rIr~i~~~-G~v~T 414 (496)
T 3kya_A 337 SDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYF-VDRLNFCVRKVTPE-GIVST 414 (496)
T ss_dssp EEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEE-EEGGGTEEEEECTT-CBEEE
T ss_pred EecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEE-EECCCCEEEEEeCC-CCEEE
Confidence 665 33322 1233321 012112333210 2334444 35667788877743 34444
Q ss_pred eccc------------------------ccceeEEEECCC-CCEEEEEeCCCCEEEEEECCCCcEEE
Q 022387 254 IMAH------------------------DSRIACFALTQD-GQLLATSSTKGTLVRIFNTLDGTLLQ 295 (298)
Q Consensus 254 ~~~H------------------------~~~V~~l~fspd-g~~lAt~S~Dgt~IrIWd~~tg~~l~ 295 (298)
+-+. -.....|+++++ |.++++=..... ||.++++...+++
T Consensus 415 iaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~r-Irki~~~~~~~~~ 480 (496)
T 3kya_A 415 YAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHT-IRTISMEQEENVA 480 (496)
T ss_dssp EEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTE-EEEEEECCCC---
T ss_pred EecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCE-EEEEECCCCcccc
Confidence 4321 124779999997 777777666676 9999998776654
No 299
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=93.15 E-value=0.25 Score=48.06 Aligned_cols=180 Identities=7% Similarity=-0.074 Sum_probs=90.5
Q ss_pred EEEEEcCCeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCC----CcEEEEeec
Q 022387 99 CFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ----SRCIGELSF 174 (298)
Q Consensus 99 ~lasgs~~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~----~~~~~~~~~ 174 (298)
+|+......|++.+++......... .......+.+......++++.. ..+.|+.+++.. ......+..
T Consensus 379 ~ll~~~~~~I~~id~~~~~~~~~~~--~~~~p~gla~d~~~~~Ly~sD~------~~~~I~~~~~~g~~~~~~~~~~i~~ 450 (699)
T 1n7d_A 379 YLFFTNRHEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDL------SQRMICSTQLDRAHGVSSYDTVISR 450 (699)
T ss_dssp CBCCCCTTC-CEECTTSCCEECCSC--CCTTCCCCEEETTTTEEEECCT------TTTSBEEEESCCCCC-CCCCCBCCS
T ss_pred eEEecCccceEEEeCCCCcceeeec--cCcceEEEccccccCeEEEEec------CCCeEEEEecCCCCCCcceEEEEeC
Confidence 3444445667777776544322111 1233445566665666666542 346788888765 121111111
Q ss_pred -CCceEEEEEe--CCeEEEEE--CCeEEEEEcCCCeEEEEEe-ccCCCcceEEEEeCCCCeEEEEecCC-CceEEEEEcC
Q 022387 175 -RSEVRSVKLR--RDRIIVVL--EQKIFVYNFADLKLLHQIE-TIANPKGLCAVSQGVGSLVLVCPGLQ-KGQVRVEHYA 247 (298)
Q Consensus 175 -~~~v~~v~~~--~~~l~v~~--~~~I~iwd~~~~~~i~~~~-~~~~~~~~~~~s~~~d~~~la~sGs~-dg~v~i~~~~ 247 (298)
......+++. ...++++. .+.|.++++..... .++. ........+++.+.. +.+++ +... .+.|...++.
T Consensus 451 ~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~-~~l~~~~~~~P~giavDp~~-g~ly~-td~~~~~~I~~~~~d 527 (699)
T 1n7d_A 451 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR-KTLFREQGSKPRAIVVDPVH-GFMYW-TDWGTPAKIKKGGLN 527 (699)
T ss_dssp CC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCE-EEECCCSSCCCCCEECCSSS-SCCEE-CCCSSSCCEEBCCSS
T ss_pred CCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCce-EEEEeCCCCCcceEEEccCC-CcEEE-cccCCCCeEEEEeCC
Confidence 1123344443 45555553 36898988764433 3332 211222234444432 23333 2322 2677766665
Q ss_pred CcceEee-cccccceeEEEECCCC-CEEEEEeCCCCEEEEEECCC
Q 022387 248 SKRTKFI-MAHDSRIACFALTQDG-QLLATSSTKGTLVRIFNTLD 290 (298)
Q Consensus 248 ~~~~~~~-~~H~~~V~~l~fspdg-~~lAt~S~Dgt~IrIWd~~t 290 (298)
......+ ...-...+.|+|+|++ +++.+-+..+. |.++++..
T Consensus 528 G~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~-I~~~d~dG 571 (699)
T 1n7d_A 528 GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS-ISSIDVNG 571 (699)
T ss_dssp SCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTE-EEEECSSS
T ss_pred CCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCe-EEEEccCC
Confidence 4433322 2223457899999874 55566566666 99999864
No 300
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=93.02 E-value=5 Score=36.31 Aligned_cols=192 Identities=9% Similarity=0.002 Sum_probs=100.4
Q ss_pred CCeEEEEEcCCCCEEEEEcC-----CeEEEEEcCCCce--EEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeE
Q 022387 86 PTLLHISFNQDHGCFAAGTD-----HGFRIYNCDPFRE--IFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKV 158 (298)
Q Consensus 86 ~~V~~v~fs~dg~~lasgs~-----~gi~vw~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v 158 (298)
....+++|+++|+++++... .++...+...... ..... ......+.+......+.++.. ..+.|
T Consensus 182 ~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~~---~~~P~giavd~~~G~lyv~d~------~~~~V 252 (433)
T 4hw6_A 182 GQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLCN---ARGAKTCAVHPQNGKIYYTRY------HHAMI 252 (433)
T ss_dssp SCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEEE---CSSBCCCEECTTTCCEEECBT------TCSEE
T ss_pred CCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeeccccccc---cCCCCEEEEeCCCCeEEEEEC------CCCEE
Confidence 46889999999996555542 2333333221111 00111 122223444442233333331 35789
Q ss_pred EEEeCCCCcEEEEe-ecC--CceEEEEEeCC--eEEEEEC--CeEEEEEcC--CCeE--EEEEecc-CCC----------
Q 022387 159 MIWDDHQSRCIGEL-SFR--SEVRSVKLRRD--RIIVVLE--QKIFVYNFA--DLKL--LHQIETI-ANP---------- 216 (298)
Q Consensus 159 ~iWD~~~~~~~~~~-~~~--~~v~~v~~~~~--~l~v~~~--~~I~iwd~~--~~~~--i~~~~~~-~~~---------- 216 (298)
+.+|..++.....+ ... .....++++++ .+.++.. +.|+.+++. +++. ...+... ...
T Consensus 253 ~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a 332 (433)
T 4hw6_A 253 SSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGA 332 (433)
T ss_dssp EEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGS
T ss_pred EEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccce
Confidence 99998877652222 221 22345888875 3666653 689988864 2221 1223221 000
Q ss_pred --cceEEEEe---------CCCCeEEEEecCCCceEEEEEcCCcceEeeccc------------------ccceeEEEEC
Q 022387 217 --KGLCAVSQ---------GVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAH------------------DSRIACFALT 267 (298)
Q Consensus 217 --~~~~~~s~---------~~d~~~la~sGs~dg~v~i~~~~~~~~~~~~~H------------------~~~V~~l~fs 267 (298)
..-..+.. +.++.+++ +-..++.|+..+.+. .+.++.+. -.....|+++
T Consensus 333 ~~~~P~giav~~n~~y~~dd~~g~lyv-aD~~n~~I~~~~~~G-~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd 410 (433)
T 4hw6_A 333 RLWGPNQGIFVKNEAYAGEEDEYDFYF-CDRDSHTVRVLTPEG-RVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYD 410 (433)
T ss_dssp BCSSEEEEEEEECGGGTTSSCCEEEEE-EETTTTEEEEECTTS-EEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEE
T ss_pred EEcCCccEEEEccccccccCCCCcEEE-EECCCCEEEEECCCC-CEEEEEeCCCCCccccCCCccccccEeCCCcEEEEE
Confidence 01112333 45555555 356677787776533 33333221 1237889999
Q ss_pred -CCCCEEEEEeCCCCEEEEEECC
Q 022387 268 -QDGQLLATSSTKGTLVRIFNTL 289 (298)
Q Consensus 268 -pdg~~lAt~S~Dgt~IrIWd~~ 289 (298)
++|.++++=...+. ||.++++
T Consensus 411 ~~~g~lyVaD~~n~r-Ir~i~~e 432 (433)
T 4hw6_A 411 MKRKCFYIGDCDNHR-VRKIAPE 432 (433)
T ss_dssp TTTTEEEEEEGGGTE-EEEEEEC
T ss_pred CCCCEEEEEeCCCCE-EEEEecC
Confidence 77887777776777 9988864
No 301
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=92.66 E-value=7.3 Score=37.23 Aligned_cols=195 Identities=7% Similarity=-0.078 Sum_probs=110.1
Q ss_pred CeEEEEEcCCCCEEEEE-cC-CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCC
Q 022387 87 TLLHISFNQDHGCFAAG-TD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (298)
Q Consensus 87 ~V~~v~fs~dg~~lasg-s~-~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~ 164 (298)
.+..|+|.+++..|... .. +.|..++++.......... .......+++.+....+..+.. ..+.|.+.++.
T Consensus 38 ~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~-g~~~P~GlAvD~~~~~LY~tD~------~~~~I~v~~~d 110 (628)
T 4a0p_A 38 EASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEF-GLDYPEGMAVDWLGKNLYWADT------GTNRIEVSKLD 110 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS-SCSCCCEEEEETTTTEEEEEET------TTTEEEEEETT
T ss_pred ceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeC-CCCCcceEEEEeCCCEEEEEEC------CCCEEEEEecC
Confidence 67899999876665544 34 4466777665433222221 1123445666655555655543 24778888876
Q ss_pred CCcEEEEe-ecCCceEEEEEeC--CeEEEEE---CCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEecCCC
Q 022387 165 QSRCIGEL-SFRSEVRSVKLRR--DRIIVVL---EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQK 238 (298)
Q Consensus 165 ~~~~~~~~-~~~~~v~~v~~~~--~~l~v~~---~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs~d 238 (298)
.......+ ........+++++ ..+.+.. .+.|...++..... ..+.........+++..+.+ .++. +-...
T Consensus 111 G~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~-~~l~~~~~~P~GlalD~~~~-~LY~-aD~~~ 187 (628)
T 4a0p_A 111 GQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER-TTLVPNVGRANGLTIDYAKR-RLYW-TDLDT 187 (628)
T ss_dssp STTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEECSCSSEEEEEEETTTT-EEEE-EETTT
T ss_pred CCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce-EEEECCCCCcceEEEccccC-EEEE-EECCC
Confidence 54322222 2223467788875 3555554 25777777743332 22222212223345554432 3333 35667
Q ss_pred ceEEEEEcCCcceEeecccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcE
Q 022387 239 GQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTL 293 (298)
Q Consensus 239 g~v~i~~~~~~~~~~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~ 293 (298)
+.|...++.......+...-.....|++.. +.++.|-...+. |...|..+|+.
T Consensus 188 ~~I~~~d~dG~~~~v~~~~l~~P~glav~~-~~ly~tD~~~~~-I~~~dk~tg~~ 240 (628)
T 4a0p_A 188 NLIESSNMLGLNREVIADDLPHPFGLTQYQ-DYIYWTDWSRRS-IERANKTSGQN 240 (628)
T ss_dssp TEEEEEETTSCSCEEEEECCSCEEEEEEET-TEEEEEETTTTE-EEEEETTTCCS
T ss_pred CEEEEEcCCCCceEEeeccCCCceEEEEEC-CEEEEecCCCCE-EEEEECCCCCc
Confidence 788888876654444444445567888876 566667666777 99999888754
No 302
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=92.50 E-value=6.7 Score=36.39 Aligned_cols=202 Identities=5% Similarity=-0.007 Sum_probs=101.4
Q ss_pred CeEEEEEcC-CCC-EEEEEcC-CeEEEEEcCCCceEEEEeeec--CCceEEEEE-------ecCCCEEEEEeCCCCCCCC
Q 022387 87 TLLHISFNQ-DHG-CFAAGTD-HGFRIYNCDPFREIFRRDFER--GGGIGVVEM-------LFRCNILALVGGGPDPQYP 154 (298)
Q Consensus 87 ~V~~v~fs~-dg~-~lasgs~-~gi~vw~~~~~~~~~~~~~~~--~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~ 154 (298)
....++|.| ++. ++++-.. ..+++.|.+............ ......+.+ ..+++.++++.........
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 567899998 344 4444433 446677766654433222100 113566777 6677766666532100000
Q ss_pred CCeEEEEeCCC-CcEE-----EEeecCCceEEEEEeC--CeEEEEE--CCeEEEEEcC-------CCeE-----------
Q 022387 155 LNKVMIWDDHQ-SRCI-----GELSFRSEVRSVKLRR--DRIIVVL--EQKIFVYNFA-------DLKL----------- 206 (298)
Q Consensus 155 d~~v~iWD~~~-~~~~-----~~~~~~~~v~~v~~~~--~~l~v~~--~~~I~iwd~~-------~~~~----------- 206 (298)
...|.+.+... +... ..+........+.+++ ..|.++. .+.|..+|+. +++.
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred CceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 12366666443 1211 1221112345667776 4556554 3689999986 4443
Q ss_pred EEEE-eccC-CCcceEEEEeCCCCeEEEEecCCCceEEEEEcC--Ccce---Eeeccc---c------------ccee-E
Q 022387 207 LHQI-ETIA-NPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYA--SKRT---KFIMAH---D------------SRIA-C 263 (298)
Q Consensus 207 i~~~-~~~~-~~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~--~~~~---~~~~~H---~------------~~V~-~ 263 (298)
...+ .... .....+++++ ++.+|.++-+.+..|+..+.. .+.+ .++-+. . .... -
T Consensus 300 ~~~l~~~~~~~~p~~ia~~p--~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~g 377 (496)
T 3kya_A 300 FKQLFTIADPSWEFQIFIHP--TGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQG 377 (496)
T ss_dssp EEEEEECSSSSCCEEEEECT--TSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEE
T ss_pred cceeEecCCCCCceEEEEcC--CCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEE
Confidence 2222 2111 1123345554 445322235667777775543 3222 222221 0 1244 4
Q ss_pred EEEC-------CCCCEEEEEeCCCCEEEEEECCCCc
Q 022387 264 FALT-------QDGQLLATSSTKGTLVRIFNTLDGT 292 (298)
Q Consensus 264 l~fs-------pdg~~lAt~S~Dgt~IrIWd~~tg~ 292 (298)
++.. .+|.++++=..... ||.++ .+|.
T Consensus 378 v~vd~~~~~~~~~g~lyVaD~~N~r-Ir~i~-~~G~ 411 (496)
T 3kya_A 378 VFVKNPDYTGEEEYDFYFVDRLNFC-VRKVT-PEGI 411 (496)
T ss_dssp EEEECTTCCSSCCEEEEEEEGGGTE-EEEEC-TTCB
T ss_pred EEEccccccccCCCeEEEEECCCCE-EEEEe-CCCC
Confidence 5554 56777777776777 99998 5664
No 303
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=92.37 E-value=0.33 Score=42.90 Aligned_cols=137 Identities=9% Similarity=0.079 Sum_probs=68.6
Q ss_pred CCCeEEEEeCCCCcEEEEeecCCceE--EEEE-------------eCCeEEEEE-CCeEEEEEcCCCeEEEEEeccCCCc
Q 022387 154 PLNKVMIWDDHQSRCIGELSFRSEVR--SVKL-------------RRDRIIVVL-EQKIFVYNFADLKLLHQIETIANPK 217 (298)
Q Consensus 154 ~d~~v~iWD~~~~~~~~~~~~~~~v~--~v~~-------------~~~~l~v~~-~~~I~iwd~~~~~~i~~~~~~~~~~ 217 (298)
.||.|..+|..+|.....+....-+. -+.. ....+++.. ++++...|+.+++.+.++.......
T Consensus 65 ~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~ 144 (339)
T 2be1_A 65 GDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNG 144 (339)
T ss_dssp TTTEEEEEETTTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC
T ss_pred CCCEEEEEECCCCcEEeeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcc
Confidence 57899999988875544443322110 0111 223333333 5799999999999999987532100
Q ss_pred ------c-eEEEE---e-CCCCeEEEEecCCCceEEEEEcCCcceEeec-----cccc--ce-eEEEECCCCCEEEEEeC
Q 022387 218 ------G-LCAVS---Q-GVGSLVLVCPGLQKGQVRVEHYASKRTKFIM-----AHDS--RI-ACFALTQDGQLLATSST 278 (298)
Q Consensus 218 ------~-~~~~s---~-~~d~~~la~sGs~dg~v~i~~~~~~~~~~~~-----~H~~--~V-~~l~fspdg~~lAt~S~ 278 (298)
. +.... . ..++.+++ |..+..+.+.+.+ .....+. .+.. .+ .+-.++.|+.+++ ++.
T Consensus 145 ~~~~~~e~~~~~~d~~~d~~~~~v~i--g~~~y~v~~~~~s-G~~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~~~-~~~ 220 (339)
T 2be1_A 145 YFGSQSVDCSPEEKIKLQECENMIVI--GKTIFELGIHSYD-GASYNVTYSTWQQNVLDVPLALQNTFSKDGMCIA-PFR 220 (339)
T ss_dssp --------------------CCEEEE--EEEEEECEECCTT-SCCCCCEEEEEECCTTTHHHHTTCSSCSSSCCEE-EET
T ss_pred cccccccccccccccccccCCCeEEE--ecceEEEEEECCC-CCeEEEecccccccccccccccccccccCCcEEE-ECC
Confidence 1 11110 0 11122332 5555555554422 2211111 0000 00 0011134577755 577
Q ss_pred CCCEEEEEECCCCcEEE
Q 022387 279 KGTLVRIFNTLDGTLLQ 295 (298)
Q Consensus 279 Dgt~IrIWd~~tg~~l~ 295 (298)
||. |.-+|..+|+.+.
T Consensus 221 dg~-v~A~d~~~G~~~W 236 (339)
T 2be1_A 221 DKS-LLASDLDFRIARW 236 (339)
T ss_dssp TTE-EEEECSTTCCEEE
T ss_pred CCE-EEEEECCCCcEEE
Confidence 898 8899999998875
No 304
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=91.58 E-value=5.6 Score=33.53 Aligned_cols=188 Identities=13% Similarity=0.064 Sum_probs=93.2
Q ss_pred CCCEEEEEcC-----CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCCcEEE
Q 022387 96 DHGCFAAGTD-----HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIG 170 (298)
Q Consensus 96 dg~~lasgs~-----~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~~~~ 170 (298)
++.+++.|+. +.+.+||..+.+......+. ...........+ +.+.+.+|.+......+.+.+||..+.+...
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP-TPRDSLAACAAE-GKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS-SCCBSCEEEEET-TEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC-ccccceeEEEEC-CEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 6667777763 33567788777654333321 111111112223 4455555432111134678999998876543
Q ss_pred EeecCC--ceEEEEEeCCeEEEEE-----------CCeEEEEEcCCCeEEEEEeccCCCc-ceEEEEeCCCCeEEEEecC
Q 022387 171 ELSFRS--EVRSVKLRRDRIIVVL-----------EQKIFVYNFADLKLLHQIETIANPK-GLCAVSQGVGSLVLVCPGL 236 (298)
Q Consensus 171 ~~~~~~--~v~~v~~~~~~l~v~~-----------~~~I~iwd~~~~~~i~~~~~~~~~~-~~~~~s~~~d~~~la~sGs 236 (298)
.-.... .-.++....+.+.+.+ .+.+.+||+.+.+= ..+.....+. ...++.. ++.++++ |.
T Consensus 133 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~~i~v~-GG 208 (306)
T 3ii7_A 133 KPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETW-TELCPMIEARKNHGLVFV--KDKIFAV-GG 208 (306)
T ss_dssp ECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEE-EEECCCSSCCBSCEEEEE--TTEEEEE-CC
T ss_pred CCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeE-EECCCccchhhcceEEEE--CCEEEEE-eC
Confidence 222211 1222333355555543 24588999876542 2222211111 1122222 2366665 54
Q ss_pred CC-----ceEEEEEcCCcceEee---cccccceeEEEECCCCCEEEEEeCC-----CCEEEEEECCCCc
Q 022387 237 QK-----GQVRVEHYASKRTKFI---MAHDSRIACFALTQDGQLLATSSTK-----GTLVRIFNTLDGT 292 (298)
Q Consensus 237 ~d-----g~v~i~~~~~~~~~~~---~~H~~~V~~l~fspdg~~lAt~S~D-----gt~IrIWd~~tg~ 292 (298)
.+ ..+.++|..+..-..+ ........++.+ ++++++.|+.+ .. |.+||..+.+
T Consensus 209 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~-~~~yd~~~~~ 274 (306)
T 3ii7_A 209 QNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGH-ILEYNTETDK 274 (306)
T ss_dssp EETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCE-EEEEETTTTE
T ss_pred CCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeee-EEEEcCCCCe
Confidence 43 3566788766542222 111122333333 77889998854 34 8889988764
No 305
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=91.35 E-value=6.9 Score=36.99 Aligned_cols=131 Identities=13% Similarity=0.176 Sum_probs=77.9
Q ss_pred CeEEEEEcCCCCEEEEEcC--CeEEEEEcCCCce-----------EEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCC
Q 022387 87 TLLHISFNQDHGCFAAGTD--HGFRIYNCDPFRE-----------IFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQY 153 (298)
Q Consensus 87 ~V~~v~fs~dg~~lasgs~--~gi~vw~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (298)
....|.++|||+++++++. ..+-|++.+.... ....+. +-+.+-+...|+++..+..+ .|
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~--e~GlGPlHt~Fd~~G~aYTt-----lf 396 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEP--ELGLGPLHTTFDGRGNAYTT-----LF 396 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECC--BCCSCEEEEEECSSSEEEEE-----ET
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeec--cCCCcccEEEECCCCceEee-----ee
Confidence 3456889999999998876 5577998864211 112221 22344444555555566666 56
Q ss_pred CCCeEEEEeCCCC----------cEEEEeecCCceEEEEE--------eCCeEEEEEC--------------CeEEEEEc
Q 022387 154 PLNKVMIWDDHQS----------RCIGELSFRSEVRSVKL--------RRDRIIVVLE--------------QKIFVYNF 201 (298)
Q Consensus 154 ~d~~v~iWD~~~~----------~~~~~~~~~~~v~~v~~--------~~~~l~v~~~--------------~~I~iwd~ 201 (298)
-|..|..|++... ..+..+..+-.+--+.. ..+.|++... ..-.++||
T Consensus 397 idSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~skdrfl~vGpl~pen~QlidI 476 (638)
T 3sbq_A 397 IDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKFSKDRFLPVGPLHPENDQLIDI 476 (638)
T ss_dssp TTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESCCTTSSCCCSSSCCEEEEEEEC
T ss_pred ecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecccccccCcCCCCCCCCcceeEec
Confidence 7899999997542 34445544322222211 1123333321 26788898
Q ss_pred --CCCeEEEEEeccCCCcceEEEEe
Q 022387 202 --ADLKLLHQIETIANPKGLCAVSQ 224 (298)
Q Consensus 202 --~~~~~i~~~~~~~~~~~~~~~s~ 224 (298)
..+++++.......|..++.+..
T Consensus 477 sGdkM~lv~D~P~~~EPHda~~v~~ 501 (638)
T 3sbq_A 477 SGDEMKLVHDGPTFAEPHDCIMARR 501 (638)
T ss_dssp SSSSCEEEEEEEESSCCCCEEEEEG
T ss_pred CCCceEEEecCCCCCCCcceEEecH
Confidence 46788888887777777766654
No 306
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=91.14 E-value=6.1 Score=33.15 Aligned_cols=187 Identities=11% Similarity=0.072 Sum_probs=90.7
Q ss_pred CCCEEEEEc-C------CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCCc-
Q 022387 96 DHGCFAAGT-D------HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSR- 167 (298)
Q Consensus 96 dg~~lasgs-~------~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~- 167 (298)
++.+++.|+ . +.+.+||..+.+......+. ...........+ +.+.+.+|.... ...+.+.++|..+++
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~~~~~~~~-~~l~v~GG~~~~-~~~~~~~~~d~~~~~~ 90 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSIT-RKRRYVASVSLH-DRIYVIGGYDGR-SRLSSVECLDYTADED 90 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCS-SCCBSCEEEEET-TEEEEECCBCSS-CBCCCEEEEETTCCTT
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCC-hhhccccEEEEC-CEEEEEcCCCCC-ccCceEEEEECCCCCC
Confidence 455666776 2 23567787776543322221 111111112223 445555543211 123678999998876
Q ss_pred --EEEEeecC--CceEEEEEeCCeEEEEEC-------CeEEEEEcCCCeEEEEEeccCCC-cceEEEEeCCCCeEEEEec
Q 022387 168 --CIGELSFR--SEVRSVKLRRDRIIVVLE-------QKIFVYNFADLKLLHQIETIANP-KGLCAVSQGVGSLVLVCPG 235 (298)
Q Consensus 168 --~~~~~~~~--~~v~~v~~~~~~l~v~~~-------~~I~iwd~~~~~~i~~~~~~~~~-~~~~~~s~~~d~~~la~sG 235 (298)
....-... ..-.++....+.+.+.+. +.+.+||+.+.+-. .+.....+ ....++.. ++.++++ |
T Consensus 91 ~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~-~~~~~p~~r~~~~~~~~--~~~iyv~-G 166 (301)
T 2vpj_A 91 GVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWS-MLGDMQTAREGAGLVVA--SGVIYCL-G 166 (301)
T ss_dssp CCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEE-EEEECSSCCBSCEEEEE--TTEEEEE-C
T ss_pred CeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEE-ECCCCCCCcccceEEEE--CCEEEEE-C
Confidence 33322211 112223333555555532 47899998765422 22221111 11122222 3366665 5
Q ss_pred CCC-----ceEEEEEcCCcceEeec---ccccceeEEEECCCCCEEEEEeCC-----CCEEEEEECCCCc
Q 022387 236 LQK-----GQVRVEHYASKRTKFIM---AHDSRIACFALTQDGQLLATSSTK-----GTLVRIFNTLDGT 292 (298)
Q Consensus 236 s~d-----g~v~i~~~~~~~~~~~~---~H~~~V~~l~fspdg~~lAt~S~D-----gt~IrIWd~~tg~ 292 (298)
..+ ..+.++|..+..-..+. .....-.++.+ ++++++.|+.+ .. |.+||+.+.+
T Consensus 167 G~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~-v~~yd~~~~~ 233 (301)
T 2vpj_A 167 GYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSS-VEAYNIRTDS 233 (301)
T ss_dssp CBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCC-EEEEETTTTE
T ss_pred CCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccce-EEEEeCCCCc
Confidence 443 35677887665432221 11111222223 67888888765 35 8899988764
No 307
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=90.98 E-value=11 Score=35.91 Aligned_cols=185 Identities=7% Similarity=-0.045 Sum_probs=104.3
Q ss_pred CEEEEEcCCeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCCcEEEEeecC-C
Q 022387 98 GCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFR-S 176 (298)
Q Consensus 98 ~~lasgs~~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~~~~~~~~~-~ 176 (298)
.+|+.+....|+..+++.........+..-.....+++....+.+..+.. ..+.|..++.........+... .
T Consensus 7 ~~Ll~s~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~------~~~~I~r~~~~g~~~~~v~~~g~~ 80 (628)
T 4a0p_A 7 AFLLFSRRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDI------SLKTISRAFMNGSALEHVVEFGLD 80 (628)
T ss_dssp CEEEEEETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEET------TTTEEEEEETTSCSCEEEECSSCS
T ss_pred cEEEEEeCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEEC------CCCeEEEEECCCCCcEEEEeCCCC
Confidence 36666677788888888755433333211234556677776677766653 3578888888654333223222 2
Q ss_pred ceEEEEE--eCCeEEEEEC--CeEEEEEcCCCeEEEEEe-ccCCCcceEEEEeCCCCeEEEEecCCCceEEEEEcCCcce
Q 022387 177 EVRSVKL--RRDRIIVVLE--QKIFVYNFADLKLLHQIE-TIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRT 251 (298)
Q Consensus 177 ~v~~v~~--~~~~l~v~~~--~~I~iwd~~~~~~i~~~~-~~~~~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~~~ 251 (298)
....+++ ....+.++.. +.|.+.++..... ..+. ........+++.+. .+.++.+--...+.|...++.....
T Consensus 81 ~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~-~~l~~~~l~~P~~iavdp~-~G~lY~tD~g~~~~I~r~~~dG~~~ 158 (628)
T 4a0p_A 81 YPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHR-QVLVWKDLDSPRALALDPA-EGFMYWTEWGGKPKIDRAAMDGSER 158 (628)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSTTC-EEEECSSCCCEEEEEEETT-TTEEEEEECSSSCEEEEEETTSCSC
T ss_pred CcceEEEEeCCCEEEEEECCCCEEEEEecCCCcE-EEEEeCCCCCcccEEEccC-CCeEEEeCCCCCCEEEEEeCCCCce
Confidence 3444554 4566766653 6899998854322 2222 21111233444432 2344442112256777777766554
Q ss_pred EeecccccceeEEEECCCCCEEEEE-eCCCCEEEEEECCCC
Q 022387 252 KFIMAHDSRIACFALTQDGQLLATS-STKGTLVRIFNTLDG 291 (298)
Q Consensus 252 ~~~~~H~~~V~~l~fspdg~~lAt~-S~Dgt~IrIWd~~tg 291 (298)
..+...-...+.|++++++..|.-+ ...+. |...|+..+
T Consensus 159 ~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~-I~~~d~dG~ 198 (628)
T 4a0p_A 159 TTLVPNVGRANGLTIDYAKRRLYWTDLDTNL-IESSNMLGL 198 (628)
T ss_dssp EEEECSCSSEEEEEEETTTTEEEEEETTTTE-EEEEETTSC
T ss_pred EEEECCCCCcceEEEccccCEEEEEECCCCE-EEEEcCCCC
Confidence 4443344568999999976555444 44555 999998654
No 308
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=90.86 E-value=6.7 Score=33.16 Aligned_cols=190 Identities=13% Similarity=0.086 Sum_probs=90.4
Q ss_pred cCCCCEEEEEcC-----CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCC---CCCCCCCeEEEEeCCC
Q 022387 94 NQDHGCFAAGTD-----HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGP---DPQYPLNKVMIWDDHQ 165 (298)
Q Consensus 94 s~dg~~lasgs~-----~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~d~~v~iWD~~~ 165 (298)
.-++.+++.|+. +.+.+||..+.+......+. ........... .+.+.+.+|.. +.....+.+.++|..+
T Consensus 22 ~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~ 99 (308)
T 1zgk_A 22 KVGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQ-VPRSGLAGCVV-GGLLYAVGGRNNSPDGNTDSSALDCYNPMT 99 (308)
T ss_dssp CCCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCS-SCCBSCEEEEE-TTEEEEECCEEEETTEEEECCCEEEEETTT
T ss_pred CCCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCC-cccccceEEEE-CCEEEEECCCcCCCCCCeecceEEEECCCC
Confidence 345667777762 33667887776653322221 11111111122 34455555431 1001235688999988
Q ss_pred CcEEEEeecC--CceEEEEEeCCeEEEEEC-------CeEEEEEcCCCeEEEEEeccCCCc-ceEEEEeCCCCeEEEEec
Q 022387 166 SRCIGELSFR--SEVRSVKLRRDRIIVVLE-------QKIFVYNFADLKLLHQIETIANPK-GLCAVSQGVGSLVLVCPG 235 (298)
Q Consensus 166 ~~~~~~~~~~--~~v~~v~~~~~~l~v~~~-------~~I~iwd~~~~~~i~~~~~~~~~~-~~~~~s~~~d~~~la~sG 235 (298)
++....-... ..-.++....+.+.+.+. +.+.+||+.+.+-. .+.....+. ...+... ++.++++ |
T Consensus 100 ~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~~--~~~iyv~-G 175 (308)
T 1zgk_A 100 NQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWH-LVAPMLTRRIGVGVAVL--NRLLYAV-G 175 (308)
T ss_dssp TEEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEE-ECCCCSSCCBSCEEEEE--TTEEEEE-C
T ss_pred CeEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEe-ECCCCCccccceEEEEE--CCEEEEE-e
Confidence 7643321111 111223333555555432 47889998765421 221111111 1122222 3366665 5
Q ss_pred CCC-----ceEEEEEcCCcceEeec---ccccceeEEEECCCCCEEEEEeCC-----CCEEEEEECCCCc
Q 022387 236 LQK-----GQVRVEHYASKRTKFIM---AHDSRIACFALTQDGQLLATSSTK-----GTLVRIFNTLDGT 292 (298)
Q Consensus 236 s~d-----g~v~i~~~~~~~~~~~~---~H~~~V~~l~fspdg~~lAt~S~D-----gt~IrIWd~~tg~ 292 (298)
..+ ..+.++|..+..-..+. .....-.++.+ ++++++.|+.+ .. +.+||+.+.+
T Consensus 176 G~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~-v~~yd~~~~~ 242 (308)
T 1zgk_A 176 GFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNS-VERYDVETET 242 (308)
T ss_dssp CBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCC-EEEEETTTTE
T ss_pred CCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccce-EEEEeCCCCc
Confidence 443 35777887665422221 11111222333 67888888765 45 8899988764
No 309
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=90.82 E-value=12 Score=36.11 Aligned_cols=187 Identities=16% Similarity=0.143 Sum_probs=105.0
Q ss_pred CCeEEEEEcCCCCEEEEEcCCeEEEEEcCCCceEEEEeee-cCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCC
Q 022387 86 PTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFE-RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (298)
Q Consensus 86 ~~V~~v~fs~dg~~lasgs~~gi~vw~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~ 164 (298)
..|.++....+|. |-.|+.+|+..||..+.+.. .... ....+..+.. .++ .+-+++ .+.|..+|..
T Consensus 63 ~~i~~i~~d~~g~-lWigT~~Gl~~yd~~~~~f~--~~~~~~~~~i~~i~~-~~g-~lWigt--------~~Gl~~~~~~ 129 (758)
T 3ott_A 63 TRIYCGVIIDNTY-LYMGTDNGILVYNYRADRYE--QPETDFPTDVRTMAL-QGD-TLWLGA--------LNGLYTYQLQ 129 (758)
T ss_dssp SCEEEEEEETTTE-EEEEETTEEEEEETTTTEEC--CCSCCCCSCEEEEEE-ETT-EEEEEE--------TTEEEEEETT
T ss_pred ceEEEEEEcCCCc-EEEEeCCCeEEEeCCCCEEE--CcccCCCceEEEEEe-cCC-cEEEEc--------CCcceeEeCC
Confidence 4688888777774 55566789889988765321 1100 0122333322 233 344444 1358888987
Q ss_pred CCcEEEEee----c-CCceEEEEEe-CCeEEEEECCeEEEEEcCCCeEEEEEeccCC----CcceEEEEeCCCC-eEEEE
Q 022387 165 QSRCIGELS----F-RSEVRSVKLR-RDRIIVVLEQKIFVYNFADLKLLHQIETIAN----PKGLCAVSQGVGS-LVLVC 233 (298)
Q Consensus 165 ~~~~~~~~~----~-~~~v~~v~~~-~~~l~v~~~~~I~iwd~~~~~~i~~~~~~~~----~~~~~~~s~~~d~-~~la~ 233 (298)
+++...... . ...|.++... ...+.+++.+.+..|+..+.+. ..+..... ...+.++..+.++ .+.+
T Consensus 130 ~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~Gl~~~~~~~~~~-~~~~~~~~~~~~~~~i~~i~~d~~~~~lWi- 207 (758)
T 3ott_A 130 SRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYVGTYNGLCRYIPSNGKF-EGIPLPVHSSQSNLFVNSLLEDTTRQCVWI- 207 (758)
T ss_dssp TCCEEEECHHHHCCSCSCEEEEEECTTCCEEEEETTEEEEEETTTTEE-EEECCCCCTTCSSCCEEEEEEETTTTEEEE-
T ss_pred CCeEEEeccCCCCcCCCeEEEEEEcCCCCEEEEeCCCHhhCccCCCce-EEecCCCccccccceeEEEEEECCCCEEEE-
Confidence 765432201 1 2357777776 4577778887888999876553 22321111 1124455555443 3333
Q ss_pred ecCCCceEEEEEcCCcceEeecc-cccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCc
Q 022387 234 PGLQKGQVRVEHYASKRTKFIMA-HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGT 292 (298)
Q Consensus 234 sGs~dg~v~i~~~~~~~~~~~~~-H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~ 292 (298)
|+. +-+..++...+....+.. ....|++|....+|.+.+.. ++. +.+++..+++
T Consensus 208 -gt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT--~~G-l~~~~~~~~~ 262 (758)
T 3ott_A 208 -GTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAGT--DNG-LYVYHNDTTP 262 (758)
T ss_dssp -EEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEEE--TTE-EEEECCTTSC
T ss_pred -EEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEEe--CCc-eeEEecCCCc
Confidence 343 345556665554432221 23469999999999877765 345 7788876654
No 310
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=90.73 E-value=6.7 Score=32.93 Aligned_cols=187 Identities=14% Similarity=0.120 Sum_probs=89.9
Q ss_pred CCCEEEEEcCC------eEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCCcEE
Q 022387 96 DHGCFAAGTDH------GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCI 169 (298)
Q Consensus 96 dg~~lasgs~~------gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~~~ 169 (298)
++.+++.|+.+ .+.+||..+.+......+. ...........++ .+.+.+|.... ..-+.+.+||..+.+..
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~~~~~~~~~-~iyv~GG~~~~-~~~~~~~~~d~~~~~W~ 137 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMR-DRRSTLGAAVLNG-LLYAVGGFDGS-TGLSSVEAYNIKSNEWF 137 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCS-SCCBSCEEEEETT-EEEEEEEECSS-CEEEEEEEEETTTTEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCC-ccccceEEEEECC-EEEEEcCCCCC-ccCceEEEEeCCCCeEe
Confidence 67777777632 2557777776654333221 1111111122234 44444432210 01246888998887644
Q ss_pred EEeecCC--ceEEEEEeCCeEEEEE---------CCeEEEEEcCCCeEEEEEeccCCCc-ceEEEEeCCCCeEEEEecCC
Q 022387 170 GELSFRS--EVRSVKLRRDRIIVVL---------EQKIFVYNFADLKLLHQIETIANPK-GLCAVSQGVGSLVLVCPGLQ 237 (298)
Q Consensus 170 ~~~~~~~--~v~~v~~~~~~l~v~~---------~~~I~iwd~~~~~~i~~~~~~~~~~-~~~~~s~~~d~~~la~sGs~ 237 (298)
..-.... .-.++....+.+.+.+ .+.+.+||+.+.+= ..+.....+. ...++.. ++.++++ |..
T Consensus 138 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~~iyv~-GG~ 213 (302)
T 2xn4_A 138 HVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEW-TYIAEMSTRRSGAGVGVL--NNLLYAV-GGH 213 (302)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEE-EEECCCSSCCBSCEEEEE--TTEEEEE-CCB
T ss_pred ecCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcE-EECCCCccccccccEEEE--CCEEEEE-CCC
Confidence 3222211 2223333455555543 14688999876542 2222111111 1122222 2366665 544
Q ss_pred C-----ceEEEEEcCCcceEeeccc---ccceeEEEECCCCCEEEEEeCCC-----CEEEEEECCCCc
Q 022387 238 K-----GQVRVEHYASKRTKFIMAH---DSRIACFALTQDGQLLATSSTKG-----TLVRIFNTLDGT 292 (298)
Q Consensus 238 d-----g~v~i~~~~~~~~~~~~~H---~~~V~~l~fspdg~~lAt~S~Dg-----t~IrIWd~~tg~ 292 (298)
+ ..+.++|..+..-..+... ...-..+.+ ++++++.|+.++ . |.+||+.+.+
T Consensus 214 ~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~-v~~yd~~~~~ 278 (302)
T 2xn4_A 214 DGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAV--NGLLYVVGGDDGSCNLAS-VEYYNPTTDK 278 (302)
T ss_dssp SSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCC-EEEEETTTTE
T ss_pred CCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEE--CCEEEEECCcCCCccccc-EEEEcCCCCe
Confidence 3 3577788776543222211 111122222 678888888664 4 7899988764
No 311
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=90.53 E-value=7 Score=32.79 Aligned_cols=156 Identities=13% Similarity=0.131 Sum_probs=88.3
Q ss_pred CceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCCcEEEEeecC--CceEEEEEeCC-eEEEEEC--CeEEEEEcC
Q 022387 128 GGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFR--SEVRSVKLRRD-RIIVVLE--QKIFVYNFA 202 (298)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~~~~~~~~~--~~v~~v~~~~~-~l~v~~~--~~I~iwd~~ 202 (298)
+.+..+++.++.+.+.++.. .++.|...|.. ++.++.+.+. ...-.+++.++ .++++.+ +.+.++++.
T Consensus 27 ~~lSGla~~~~~~~L~aV~d------~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTIN------KPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEE------TTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred cCcceeEEeCCCCEEEEEEC------CCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 45778888887777776664 35788889998 8888887654 35666777654 4445543 688999885
Q ss_pred CCe---EEEEEecc----CCC--cceEEEEeCCCCeEEEEecCCCceEEEEEcC----CcceEee-------ccccccee
Q 022387 203 DLK---LLHQIETI----ANP--KGLCAVSQGVGSLVLVCPGLQKGQVRVEHYA----SKRTKFI-------MAHDSRIA 262 (298)
Q Consensus 203 ~~~---~i~~~~~~----~~~--~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~----~~~~~~~-------~~H~~~V~ 262 (298)
... .+..+... ... ...+++.+..+ .++++ .......+|.++ ...+..+ ..+...+.
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~-~L~va--~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S 176 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDH-TFWFF--KEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVS 176 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTT-EEEEE--EESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCC
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCC-EEEEE--ECcCCceEEEEcccccCCceeeecchhhccccccCCce
Confidence 433 22333211 111 13455554432 33332 232233443332 1112222 12345689
Q ss_pred EEEECCC-CCEEEEEeCCCCEEEEEECCCCcEEE
Q 022387 263 CFALTQD-GQLLATSSTKGTLVRIFNTLDGTLLQ 295 (298)
Q Consensus 263 ~l~fspd-g~~lAt~S~Dgt~IrIWd~~tg~~l~ 295 (298)
.|+|+|. |++++.....+. +-++|.. |+.+.
T Consensus 177 ~l~~dp~tg~lliLS~~s~~-L~~~d~~-g~~~~ 208 (255)
T 3qqz_A 177 GAEFNQQKNTLLVLSHESRA-LQEVTLV-GEVIG 208 (255)
T ss_dssp EEEEETTTTEEEEEETTTTE-EEEECTT-CCEEE
T ss_pred eEEEcCCCCeEEEEECCCCe-EEEEcCC-CCEEE
Confidence 9999987 455555544444 8888855 55543
No 312
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=90.47 E-value=7.1 Score=32.78 Aligned_cols=186 Identities=12% Similarity=0.156 Sum_probs=88.2
Q ss_pred CCEEEEEcC-----CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCCcEEEE
Q 022387 97 HGCFAAGTD-----HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGE 171 (298)
Q Consensus 97 g~~lasgs~-----~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~~~~~ 171 (298)
+.+++.|+. +.+..||..+.+......+. ........... .+.+.+.+|..... .-+.+.++|..+++....
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~~~~~~~-~~~lyv~GG~~~~~-~~~~~~~~d~~~~~W~~~ 92 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELP-SRRCRAGMVYM-AGLVFAVGGFNGSL-RVRTVDSYDPVKDQWTSV 92 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCS-SCCBSCEEEEE-TTEEEEESCBCSSS-BCCCEEEEETTTTEEEEE
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCC-cccccceEEEE-CCEEEEEeCcCCCc-cccceEEECCCCCceeeC
Confidence 445566653 23567787776543332221 11111111122 34455555432111 235688999988764432
Q ss_pred eecCC--ceEEEEEeCCeEEEEEC-------CeEEEEEcCCCeEEEEEeccCCCcc-eEEEEeCCCCeEEEEecCCC---
Q 022387 172 LSFRS--EVRSVKLRRDRIIVVLE-------QKIFVYNFADLKLLHQIETIANPKG-LCAVSQGVGSLVLVCPGLQK--- 238 (298)
Q Consensus 172 ~~~~~--~v~~v~~~~~~l~v~~~-------~~I~iwd~~~~~~i~~~~~~~~~~~-~~~~s~~~d~~~la~sGs~d--- 238 (298)
-.... .-.++....+.+.+.+. +.+.+||+.+.+- ..+.....+.. ..+... ++.++++ |..+
T Consensus 93 ~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~~~--~~~iyv~-GG~~~~~ 168 (302)
T 2xn4_A 93 ANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEW-FHVAPMNTRRSSVGVGVV--GGLLYAV-GGYDVAS 168 (302)
T ss_dssp CCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEE-EEECCCSSCCBSCEEEEE--TTEEEEE-CCEETTT
T ss_pred CCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeE-eecCCCCCcccCceEEEE--CCEEEEE-eCCCCCC
Confidence 22211 12223333455554431 3688899876542 22222111111 112222 3366665 4432
Q ss_pred ----ceEEEEEcCCcceEee---cccccceeEEEECCCCCEEEEEeCCC-----CEEEEEECCCCc
Q 022387 239 ----GQVRVEHYASKRTKFI---MAHDSRIACFALTQDGQLLATSSTKG-----TLVRIFNTLDGT 292 (298)
Q Consensus 239 ----g~v~i~~~~~~~~~~~---~~H~~~V~~l~fspdg~~lAt~S~Dg-----t~IrIWd~~tg~ 292 (298)
..+.++|..+..-..+ ........++.+ ++++++.|+.++ . +.+||+.+.+
T Consensus 169 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~-~~~yd~~~~~ 231 (302)
T 2xn4_A 169 RQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKS-VEVYDPTTNA 231 (302)
T ss_dssp TEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCC-EEEEETTTTE
T ss_pred CccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccce-EEEEeCCCCC
Confidence 3467788766542221 111111222233 678888888654 5 8899988764
No 313
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=90.28 E-value=8.3 Score=33.26 Aligned_cols=135 Identities=11% Similarity=0.139 Sum_probs=64.0
Q ss_pred CeEEEEeCCCCcEEEEeecC--Cce-EEEEEeCCeEEEEE--------CCeEEEEEc--CCCeEEEEEeccCCC---cce
Q 022387 156 NKVMIWDDHQSRCIGELSFR--SEV-RSVKLRRDRIIVVL--------EQKIFVYNF--ADLKLLHQIETIANP---KGL 219 (298)
Q Consensus 156 ~~v~iWD~~~~~~~~~~~~~--~~v-~~v~~~~~~l~v~~--------~~~I~iwd~--~~~~~i~~~~~~~~~---~~~ 219 (298)
+.+.++|..+.+....-... ... .++....+.+.+.. ...+.+||+ .+.+ -..+.....+ ...
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~-W~~~~~~~~~~~~~~~ 246 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLK-WNKLAPVSSPDGVAGG 246 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CE-EEECCCSSTTTCCBSC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCc-EEecCCCCCCcccccc
Confidence 67999999887644322222 122 34444556565543 236777877 3322 1222211111 122
Q ss_pred EEEEeCCCCeEEEEecCCC----------------------ceEEEEEcCCcceE---eecccccceeEEEECCCCCEEE
Q 022387 220 CAVSQGVGSLVLVCPGLQK----------------------GQVRVEHYASKRTK---FIMAHDSRIACFALTQDGQLLA 274 (298)
Q Consensus 220 ~~~s~~~d~~~la~sGs~d----------------------g~v~i~~~~~~~~~---~~~~H~~~V~~l~fspdg~~lA 274 (298)
.++..+ +.++++ |..+ ..+.++|..+..-. .+......-.++ .-++++++
T Consensus 247 ~~~~~~--~~iyv~-GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~i~v 321 (357)
T 2uvk_A 247 FAGISN--DSLIFA-GGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSL--PWNNSLLI 321 (357)
T ss_dssp EEEEET--TEEEEE-CCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEE--EETTEEEE
T ss_pred eEEEEC--CEEEEE-cCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeE--EeCCEEEE
Confidence 233333 366665 4421 24566777654321 222211112222 24788889
Q ss_pred EEeCCC-----CEEEEEECCCCcEEEe
Q 022387 275 TSSTKG-----TLVRIFNTLDGTLLQE 296 (298)
Q Consensus 275 t~S~Dg-----t~IrIWd~~tg~~l~~ 296 (298)
.|+.++ ..|.++++++++.+..
T Consensus 322 ~GG~~~~~~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 322 IGGETAGGKAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp EEEECGGGCEEEEEEEEEC-CCSCEEE
T ss_pred EeeeCCCCCEeeeEEEEEEcCcEeEee
Confidence 998654 1255669988887643
No 314
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=90.24 E-value=7.4 Score=32.61 Aligned_cols=188 Identities=9% Similarity=0.062 Sum_probs=92.9
Q ss_pred CCCEEEEEcCC------eEEEEEcCCCc---eEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCC
Q 022387 96 DHGCFAAGTDH------GFRIYNCDPFR---EIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQS 166 (298)
Q Consensus 96 dg~~lasgs~~------gi~vw~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~ 166 (298)
++++++.|+.+ .+.+||..+.. ......+. ...........+ +.+.+.+|..... ..+.+.++|..+.
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p-~~r~~~~~~~~~-~~lyv~GG~~~~~-~~~~~~~~d~~~~ 138 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMN-VRRGLAGATTLG-DMIYVSGGFDGSR-RHTSMERYDPNID 138 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCS-SCCBSCEEEEET-TEEEEECCBCSSC-BCCEEEEEETTTT
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCC-CCccceeEEEEC-CEEEEEcccCCCc-ccceEEEEcCCCC
Confidence 56777777632 36678877766 43332221 111111111223 4455555432111 2357899999887
Q ss_pred cEEEEeecC--CceEEEEEeCCeEEEEE-------CCeEEEEEcCCCeEEEEEeccCCCc-ceEEEEeCCCCeEEEEecC
Q 022387 167 RCIGELSFR--SEVRSVKLRRDRIIVVL-------EQKIFVYNFADLKLLHQIETIANPK-GLCAVSQGVGSLVLVCPGL 236 (298)
Q Consensus 167 ~~~~~~~~~--~~v~~v~~~~~~l~v~~-------~~~I~iwd~~~~~~i~~~~~~~~~~-~~~~~s~~~d~~~la~sGs 236 (298)
+....-... ..-.++....+.+.+.+ .+.+.+||+.+.+= ..+.....+. ...++..+ +.++++ |.
T Consensus 139 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~~~~--~~i~v~-GG 214 (301)
T 2vpj_A 139 QWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHW-TNVTPMATKRSGAGVALLN--DHIYVV-GG 214 (301)
T ss_dssp EEEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEE-EEECCCSSCCBSCEEEEET--TEEEEE-CC
T ss_pred eEEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcE-EeCCCCCcccccceEEEEC--CEEEEE-eC
Confidence 644322222 11222333355555553 25789999876543 2222211111 11222222 366665 54
Q ss_pred CC-----ceEEEEEcCCcceEeec---ccccceeEEEECCCCCEEEEEeCCC----CEEEEEECCCCc
Q 022387 237 QK-----GQVRVEHYASKRTKFIM---AHDSRIACFALTQDGQLLATSSTKG----TLVRIFNTLDGT 292 (298)
Q Consensus 237 ~d-----g~v~i~~~~~~~~~~~~---~H~~~V~~l~fspdg~~lAt~S~Dg----t~IrIWd~~tg~ 292 (298)
.+ ..+.++|..+..-..+. .......++.+ ++++++.|+.++ ..|.+||+++.+
T Consensus 215 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 215 FDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp BCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred CCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 43 45777888765433221 11111222333 678888888763 237889988764
No 315
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=90.02 E-value=9.6 Score=33.62 Aligned_cols=99 Identities=9% Similarity=0.071 Sum_probs=54.7
Q ss_pred eEEEEE----CCeEEEEEcCC--C--eEEEEEeccCCCcceEEEEeCCCCeEEEEecC-----------------CCceE
Q 022387 187 RIIVVL----EQKIFVYNFAD--L--KLLHQIETIANPKGLCAVSQGVGSLVLVCPGL-----------------QKGQV 241 (298)
Q Consensus 187 ~l~v~~----~~~I~iwd~~~--~--~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs-----------------~dg~v 241 (298)
+++++. ..+|.+|++.. . ..+.++.. ..-...-.+..++++.+++. .. ..|.|
T Consensus 128 ~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g-~~~~~pND~~v~~~G~fyvt-~~~~ftd~~~~~~e~~~~~~~g~v 205 (355)
T 3sre_A 128 YLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRH-KLLPSVNDIVAVGPEHFYAT-NDHYFIDPYLKSWEMHLGLAWSFV 205 (355)
T ss_dssp EEEEEECSTTCCEEEEEEEETTTTEEEEEEEECC-TTCSSEEEEEEEETTEEEEE-ESCSCSSHHHHHHHHHTTCCCEEE
T ss_pred EEEEEECCCCCCeEEEEEEECCCCEEEEEecccc-CCCCCCceEEEeCCCCEEec-CCcEeCCcccccchhhccCCccEE
Confidence 455653 35777877732 2 22333332 11222334445556677663 22 12444
Q ss_pred EEEEcCCcceEeecccccceeEEEECCCCCEEEEEe-CCCCEEEEEECCC
Q 022387 242 RVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSS-TKGTLVRIFNTLD 290 (298)
Q Consensus 242 ~i~~~~~~~~~~~~~H~~~V~~l~fspdg~~lAt~S-~Dgt~IrIWd~~t 290 (298)
..++- +.+..+...-...+.|+|||||++|..+. ..+. |..|++..
T Consensus 206 yr~d~--~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~-I~~~~~~~ 252 (355)
T 3sre_A 206 TYYSP--NDVRVVAEGFDFANGINISPDGKYVYIAELLAHK-IHVYEKHA 252 (355)
T ss_dssp EEECT--TCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTE-EEEEEECT
T ss_pred EEEEC--CeEEEeecCCcccCcceECCCCCEEEEEeCCCCe-EEEEEECC
Confidence 44443 33433333445689999999997766664 4556 99999863
No 316
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=88.92 E-value=10 Score=32.51 Aligned_cols=186 Identities=11% Similarity=0.040 Sum_probs=90.0
Q ss_pred CCeEEEEEcCCCCEEEEEcCCeEEEEEcCCCceEEEEee-ecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeE-EEEeC
Q 022387 86 PTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDF-ERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKV-MIWDD 163 (298)
Q Consensus 86 ~~V~~v~fs~dg~~lasgs~~gi~vw~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v-~iWD~ 163 (298)
..+..|.+.+++..++++...+ ||........+.... .....+..+.+..+...++... .+.+ +-+|.
T Consensus 122 ~~~~~i~~~~~~~~~~~~~~g~--v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~--------~G~~~~S~d~ 191 (327)
T 2xbg_A 122 GSPRLIKALGNGSAEMITNVGA--IYRTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSS--------RGSFYSTWEP 191 (327)
T ss_dssp SCEEEEEEEETTEEEEEETTCC--EEEESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEET--------TSSEEEEECT
T ss_pred CCeEEEEEECCCCEEEEeCCcc--EEEEcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEEC--------CCcEEEEeCC
Confidence 3578888888888888776544 333332222222221 0123444455555554444332 2333 33442
Q ss_pred --CCCcEEEEeecCCceEEEEEeCC-eEEEEE-CCeEEEEEcCCCeEEEEEecc--CCCcceEEEEeCCCCeEEEEecCC
Q 022387 164 --HQSRCIGELSFRSEVRSVKLRRD-RIIVVL-EQKIFVYNFADLKLLHQIETI--ANPKGLCAVSQGVGSLVLVCPGLQ 237 (298)
Q Consensus 164 --~~~~~~~~~~~~~~v~~v~~~~~-~l~v~~-~~~I~iwd~~~~~~i~~~~~~--~~~~~~~~~s~~~d~~~la~sGs~ 237 (298)
.+-+.+ .......+..+.+.++ .+.++. ++.+++.+...++....+... .......++...+++.++++ | .
T Consensus 192 gG~tW~~~-~~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~-g-~ 268 (327)
T 2xbg_A 192 GQTAWEPH-NRTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLA-G-G 268 (327)
T ss_dssp TCSSCEEE-ECCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEE-E-S
T ss_pred CCCceeEC-CCCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEE-e-C
Confidence 122222 1122345667777553 444444 467766642223332222211 11123445555555677764 3 4
Q ss_pred CceEEEEEcCCcceE-eec---ccccceeEEEECCCCCEEEEEeCCCCEEEEEE
Q 022387 238 KGQVRVEHYASKRTK-FIM---AHDSRIACFALTQDGQLLATSSTKGTLVRIFN 287 (298)
Q Consensus 238 dg~v~i~~~~~~~~~-~~~---~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd 287 (298)
+|.|.+ ..+..... .+. .+...+.+|.|.++++ ++.++.+|+ |.-++
T Consensus 269 ~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~-i~~~~ 319 (327)
T 2xbg_A 269 AGALLC-SQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGI-LLRYV 319 (327)
T ss_dssp TTCEEE-ESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTE-EEEEC
T ss_pred CCeEEE-eCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCce-EEEEc
Confidence 676643 33333222 222 2346789999986665 445556898 65554
No 317
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=88.79 E-value=9.9 Score=32.08 Aligned_cols=188 Identities=12% Similarity=0.046 Sum_probs=89.0
Q ss_pred CCCEEEEEcC----C------eEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCC
Q 022387 96 DHGCFAAGTD----H------GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ 165 (298)
Q Consensus 96 dg~~lasgs~----~------gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~ 165 (298)
++++++.|+. + .+.+||..+.+......+. ...........+ +.+.+.+|..... ..+.+.++|..+
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~~~~~~~~-~~iyv~GG~~~~~-~~~~~~~yd~~~ 146 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMS-VPRNRIGVGVID-GHIYAVGGSHGCI-HHNSVERYEPER 146 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCS-SCCBTCEEEEET-TEEEEECCEETTE-ECCCEEEEETTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCC-cCccccEEEEEC-CEEEEEcCCCCCc-ccccEEEECCCC
Confidence 5677777664 2 2456777666543322221 111111111223 3455555422110 135688999988
Q ss_pred CcEEEEeecCC--ceEEEEEeCCeEEEEEC-------CeEEEEEcCCCeEEEEEeccCCCc-ceEEEEeCCCCeEEEEec
Q 022387 166 SRCIGELSFRS--EVRSVKLRRDRIIVVLE-------QKIFVYNFADLKLLHQIETIANPK-GLCAVSQGVGSLVLVCPG 235 (298)
Q Consensus 166 ~~~~~~~~~~~--~v~~v~~~~~~l~v~~~-------~~I~iwd~~~~~~i~~~~~~~~~~-~~~~~s~~~d~~~la~sG 235 (298)
.+....-.... .-.++....+.+.+.+. +.+.+||+.+.+= ..+.....+. ...++.. ++.++++ |
T Consensus 147 ~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~~iyv~-G 222 (308)
T 1zgk_A 147 DEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEW-RMITAMNTIRSGAGVCVL--HNCIYAA-G 222 (308)
T ss_dssp TEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEE-EECCCCSSCCBSCEEEEE--TTEEEEE-C
T ss_pred CeEeECCCCCccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeE-eeCCCCCCccccceEEEE--CCEEEEE-e
Confidence 76433222211 12223333555555532 4688999876542 1222111111 1122222 3366665 5
Q ss_pred CCC-----ceEEEEEcCCcceEeec---ccccceeEEEECCCCCEEEEEeCCC----CEEEEEECCCCc
Q 022387 236 LQK-----GQVRVEHYASKRTKFIM---AHDSRIACFALTQDGQLLATSSTKG----TLVRIFNTLDGT 292 (298)
Q Consensus 236 s~d-----g~v~i~~~~~~~~~~~~---~H~~~V~~l~fspdg~~lAt~S~Dg----t~IrIWd~~tg~ 292 (298)
..+ ..+.++|..+..-..+. ........+.+ ++++++.|+.++ ..|.+||+.+.+
T Consensus 223 G~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 223 GYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp CBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 443 45777887765432221 11111222222 678888887653 127889988764
No 318
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=87.17 E-value=1.8 Score=38.18 Aligned_cols=108 Identities=13% Similarity=0.120 Sum_probs=62.5
Q ss_pred EEEEE-CCeEEEEEcCCCeEEEEEeccC-CCcceEEEE-e--CCCCeEEEEecCCCceEEEEEcCCcceE-eecc----c
Q 022387 188 IIVVL-EQKIFVYNFADLKLLHQIETIA-NPKGLCAVS-Q--GVGSLVLVCPGLQKGQVRVEHYASKRTK-FIMA----H 257 (298)
Q Consensus 188 l~v~~-~~~I~iwd~~~~~~i~~~~~~~-~~~~~~~~s-~--~~d~~~la~sGs~dg~v~i~~~~~~~~~-~~~~----H 257 (298)
+++.+ ++.|.-+|..+++.+.+++... .+. +... + ..++..+++..+.||.|..++...+..+ .+.. .
T Consensus 13 V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~--~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 13 LIAADVEGGLHAVDRRNGHIIWSIEPENFQPL--IEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECGGGSCCS--EECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred EEEEeCCCeEEEEECCCCcEEEEecCCccCCc--EEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 34444 6899999999999999988651 121 1111 0 0123444431257888877776654322 1110 1
Q ss_pred ccceeE---EEE-C----CCCCEEEEEeCCCCEEEEEECCCCcEEEecC
Q 022387 258 DSRIAC---FAL-T----QDGQLLATSSTKGTLVRIFNTLDGTLLQEGC 298 (298)
Q Consensus 258 ~~~V~~---l~f-s----pdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~~ 298 (298)
.+++.. ..+ . -.+..+.+|+.+|+ +.-.|+++|+.+.+|.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~-l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTI-MYTINMLNGEIISAFG 138 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEE-EEEEETTTCCEEEEES
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCE-EEEEECCCCcEEEEEe
Confidence 122221 000 0 03457788888998 9999999999998873
No 319
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=86.63 E-value=0.85 Score=46.04 Aligned_cols=37 Identities=8% Similarity=0.078 Sum_probs=33.3
Q ss_pred ceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 260 RIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 260 ~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
.|.+++..++..++.|-+.|++ +|||++.+|+++.++
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~-LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYK-LKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCE-EEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCE-EEEEECCCCCeEeee
Confidence 5778888889999999999999 999999999998764
No 320
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=85.19 E-value=17 Score=31.10 Aligned_cols=183 Identities=13% Similarity=0.136 Sum_probs=88.2
Q ss_pred CCeEEEEEcCCCCEEEEEcCCeEEEEEcCCCceEEEEe-ee---cCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEE
Q 022387 86 PTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRD-FE---RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIW 161 (298)
Q Consensus 86 ~~V~~v~fs~dg~~lasgs~~gi~vw~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iW 161 (298)
..+.+|.|..++..+|+|...++ +...+-++ .+... .. ....+..+.+ +++.+.+++ .++.|..-
T Consensus 36 ~~~~~v~~~~~~~~~~~G~~g~i-~~s~DgG~-tW~~~~~~~~~~~~~~~~i~~--~~~~~~~~g-------~~g~i~~S 104 (327)
T 2xbg_A 36 ATILDMSFIDRHHGWLVGVNATL-METRDGGQ-TWEPRTLVLDHSDYRFNSVSF--QGNEGWIVG-------EPPIMLHT 104 (327)
T ss_dssp SCEEEEEESSSSCEEEEETTTEE-EEESSTTS-SCEECCCCCSCCCCEEEEEEE--ETTEEEEEE-------ETTEEEEE
T ss_pred CcEEEEEECCCCcEEEEcCCCeE-EEeCCCCC-CCeECCCCCCCCCccEEEEEe--cCCeEEEEE-------CCCeEEEE
Confidence 47999999988888887754443 33333322 11111 10 0123334443 334444444 23444432
Q ss_pred eCCCCcEEEEee----cCCceEEEEEe-CCeEEEEEC-CeEEEEEcCC-CeEEEEEeccCCCcceEEEEeCCCCeEEEEe
Q 022387 162 DDHQSRCIGELS----FRSEVRSVKLR-RDRIIVVLE-QKIFVYNFAD-LKLLHQIETIANPKGLCAVSQGVGSLVLVCP 234 (298)
Q Consensus 162 D~~~~~~~~~~~----~~~~v~~v~~~-~~~l~v~~~-~~I~iwd~~~-~~~i~~~~~~~~~~~~~~~s~~~d~~~la~s 234 (298)
...++.-..+. ....+..+.+. +..++++.. +.| |...+ ++.-..+... .......+...+++.++++
T Consensus 105 -~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v--~~S~DgG~tW~~~~~~-~~~~~~~~~~~~~~~~~~~- 179 (327)
T 2xbg_A 105 -TDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAI--YRTKDSGKNWQALVQE-AIGVMRNLNRSPSGEYVAV- 179 (327)
T ss_dssp -SSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETTCCE--EEESSTTSSEEEEECS-CCCCEEEEEECTTSCEEEE-
T ss_pred -CCCCCCceECccccCCCCCeEEEEEECCCCEEEEeCCccE--EEEcCCCCCCEEeecC-CCcceEEEEEcCCCcEEEE-
Confidence 22233222222 12345566653 455555553 433 22222 2222222221 1223445555566677774
Q ss_pred cCCCceEEE-EEcCCcceE-eecccccceeEEEECCCCCEEEEEeCCCCEEEEEE
Q 022387 235 GLQKGQVRV-EHYASKRTK-FIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFN 287 (298)
Q Consensus 235 Gs~dg~v~i-~~~~~~~~~-~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd 287 (298)
| .+|.+.. +|-....-. .-..+...+..|++++++++++.+ .+|. +++.+
T Consensus 180 g-~~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~~-~~G~-~~~s~ 231 (327)
T 2xbg_A 180 S-SRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWMIV-NGGK-IAFSD 231 (327)
T ss_dssp E-TTSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEEEE-TTTE-EEEEE
T ss_pred E-CCCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEEEe-CCce-EEEec
Confidence 4 3455544 553222211 112345678999999999877655 4676 76664
No 321
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=85.08 E-value=22 Score=32.32 Aligned_cols=105 Identities=17% Similarity=0.128 Sum_probs=67.8
Q ss_pred EEEcCCCCEEEEEcCCeEEEEEcCCCceEEEEeee---cCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCCc
Q 022387 91 ISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFE---RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSR 167 (298)
Q Consensus 91 v~fs~dg~~lasgs~~gi~vw~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~ 167 (298)
.....+|+-|+.+-++-+|.=++.+.......... ....+..+.++++++++|+.+ +.+|.|-.+-.+.
T Consensus 26 ~~~~~n~t~i~~a~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g--------~~~V~Vv~LP~~~ 97 (452)
T 3pbp_A 26 IFSSQNGTRIVFIQDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN--------DNEIFVMEVPWGY 97 (452)
T ss_dssp EEEETTTTEEEEEETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC--------SSEEEEEECCTTC
T ss_pred EEEEcCCCEEEEEECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec--------CCeEEEEEecCcc
Confidence 34456788788877777776666543322223321 023567788899999999987 4778888765221
Q ss_pred ------------EEEEeec-------CCceEEEEEeCC-----eEEEEE-CCeEEEEEcCC
Q 022387 168 ------------CIGELSF-------RSEVRSVKLRRD-----RIIVVL-EQKIFVYNFAD 203 (298)
Q Consensus 168 ------------~~~~~~~-------~~~v~~v~~~~~-----~l~v~~-~~~I~iwd~~~ 203 (298)
..+.+.. ..+|..+.|||- .+++.+ ++.|++||+..
T Consensus 98 ~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 98 SNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp SCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred ccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 1122332 346999999973 566666 47999999964
No 322
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=84.85 E-value=17 Score=30.69 Aligned_cols=133 Identities=15% Similarity=0.174 Sum_probs=65.0
Q ss_pred CCeEEEEeCCCCcEEEEeecCC--ceEEEEEeCCeEEEEEC--------CeEEEEEcCCCeEEEEEeccCCCc-ceEEEE
Q 022387 155 LNKVMIWDDHQSRCIGELSFRS--EVRSVKLRRDRIIVVLE--------QKIFVYNFADLKLLHQIETIANPK-GLCAVS 223 (298)
Q Consensus 155 d~~v~iWD~~~~~~~~~~~~~~--~v~~v~~~~~~l~v~~~--------~~I~iwd~~~~~~i~~~~~~~~~~-~~~~~s 223 (298)
.+.+.++|..+++....-.... .-.++....+.+.+.+. +.+.+||+.+.+= ..+.....+. ...+..
T Consensus 116 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~ 194 (315)
T 4asc_A 116 LDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEW-KELAPMQTARSLFGATV 194 (315)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEE-EECCCCSSCCBSCEEEE
T ss_pred cceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeE-EECCCCCCchhceEEEE
Confidence 4678999998875433212211 12233334555555432 4789999876542 1222111111 112222
Q ss_pred eCCCCeEEEEecCCCc----eEEEEEcCCcceEeec---ccccceeEEEECCCCCEEEEEeCCC-------------CEE
Q 022387 224 QGVGSLVLVCPGLQKG----QVRVEHYASKRTKFIM---AHDSRIACFALTQDGQLLATSSTKG-------------TLV 283 (298)
Q Consensus 224 ~~~d~~~la~sGs~dg----~v~i~~~~~~~~~~~~---~H~~~V~~l~fspdg~~lAt~S~Dg-------------t~I 283 (298)
. ++.++++.|..+. .+.++|..+..-..+. ........+.+ ++++++.|+.++ ..|
T Consensus 195 ~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~v 270 (315)
T 4asc_A 195 H--DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSL--VGTLYAIGGFATLETESGELVPTELNDI 270 (315)
T ss_dssp E--TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEEEEECTTSCEEEEEEEEE
T ss_pred E--CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEE--CCEEEEECCccccCcCCccccccccCcE
Confidence 2 2366665343322 4666777665422221 11111222333 678888887642 126
Q ss_pred EEEECCCCc
Q 022387 284 RIFNTLDGT 292 (298)
Q Consensus 284 rIWd~~tg~ 292 (298)
.+||+.+.+
T Consensus 271 ~~yd~~~~~ 279 (315)
T 4asc_A 271 WRYNEEEKK 279 (315)
T ss_dssp EEEETTTTE
T ss_pred EEecCCCCh
Confidence 788887653
No 323
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=84.72 E-value=0.71 Score=47.53 Aligned_cols=37 Identities=8% Similarity=0.078 Sum_probs=32.5
Q ss_pred ceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 260 RIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 260 ~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
.+.+++..++.+++.|-+.|++ +|||++.+|+|+.++
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~-LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYK-LKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCE-EEEEETTTTEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCE-EEEEECCCCCeEEee
Confidence 4566777788899999999999 999999999999874
No 324
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=84.52 E-value=21 Score=31.46 Aligned_cols=65 Identities=17% Similarity=0.214 Sum_probs=49.9
Q ss_pred EEEEcCCCCEEEEEcCCeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCC
Q 022387 90 HISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ 165 (298)
Q Consensus 90 ~v~fs~dg~~lasgs~~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~ 165 (298)
+.-.+|..+.||.-....++|||+++..++....+ ..++..+.|. +.+.+++++ +..|..|++..
T Consensus 71 sAIMnP~~~ViALrag~~LQiFnletK~klks~~~--~e~VvfWkWi-s~~~L~lVT--------~taVyHWs~~~ 135 (365)
T 2xzh_A 71 SAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTM--TDDVTFWKWI-SLNTVALVT--------DNAVYHWSMEG 135 (365)
T ss_dssp EEEECSSSSEEEEEETTEEEEEETTTTEEEEEEEC--SSCEEEEEEC-SSSEEEEEE--------SSEEEEEESST
T ss_pred eeeeCCCccEEEEecCCeEEEechHHhhhhcceec--CCccEEEEec-CCCeEEEEc--------CCcEEEEcccC
Confidence 34568888888887778899999999988877776 5667777775 456788887 36688888753
No 325
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=84.18 E-value=1.4 Score=42.68 Aligned_cols=36 Identities=22% Similarity=0.318 Sum_probs=30.5
Q ss_pred cceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEec
Q 022387 259 SRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 259 ~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
..|.++.+ +..+|+|-+.|.+ +|||++++++++.++
T Consensus 222 ~~Is~~~~--~~~fLftL~~Dh~-LRiWsL~t~~lv~t~ 257 (729)
T 3f7f_A 222 SVISCKLF--HERYLIVLTQNCH-LKIWDLTSFTLIQDY 257 (729)
T ss_dssp CEEEEEEE--TTTEEEEEETTCE-EEEEETTTTEEEEEE
T ss_pred ceEEEecc--CCcEEEEEEcCCe-EEEEEcCCCceEEee
Confidence 45777666 4689999999999 999999999998764
No 326
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=82.34 E-value=24 Score=30.62 Aligned_cols=136 Identities=15% Similarity=0.204 Sum_probs=70.5
Q ss_pred eEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCCc--EEEEee----cCCceEEEEEeCC-----eEEEEEC-----
Q 022387 130 IGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSR--CIGELS----FRSEVRSVKLRRD-----RIIVVLE----- 193 (298)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~--~~~~~~----~~~~v~~v~~~~~-----~l~v~~~----- 193 (298)
...+.+.++++++ ++. .++.|++++ .++ .+..+. .......++++++ .+.++..
T Consensus 33 P~~ia~~pdG~l~-V~e-------~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~ 102 (352)
T 2ism_A 33 PWALAFLPDGGML-IAE-------RPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGG 102 (352)
T ss_dssp EEEEEECTTSCEE-EEE-------TTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTS
T ss_pred ceEEEEcCCCeEE-EEe-------CCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCC
Confidence 4456666777633 333 347888888 333 222222 1235678999987 6666643
Q ss_pred --CeEEEEEcCCCe-----E-EEEEec---cCCCcceEEEEeCCCCeEEEEecCC------------CceEEEEEcCCc-
Q 022387 194 --QKIFVYNFADLK-----L-LHQIET---IANPKGLCAVSQGVGSLVLVCPGLQ------------KGQVRVEHYASK- 249 (298)
Q Consensus 194 --~~I~iwd~~~~~-----~-i~~~~~---~~~~~~~~~~s~~~d~~~la~sGs~------------dg~v~i~~~~~~- 249 (298)
+.|..|+....+ . +..+.. ..+....++| ++|+.++++.|.. .|.|.-.+.+.+
T Consensus 103 ~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~--~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~ 180 (352)
T 2ism_A 103 LRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAF--GPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEP 180 (352)
T ss_dssp SEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEE--CTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSB
T ss_pred CccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEE--CCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCC
Confidence 578888876431 1 122331 1112234444 4455666644432 244444444331
Q ss_pred ------------ceEe-ecccccceeEEEECC-CCCEEEEEeC
Q 022387 250 ------------RTKF-IMAHDSRIACFALTQ-DGQLLATSST 278 (298)
Q Consensus 250 ------------~~~~-~~~H~~~V~~l~fsp-dg~~lAt~S~ 278 (298)
.... ..+| .....|+|+| +|.++++-..
T Consensus 181 p~~npf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g 222 (352)
T 2ism_A 181 APGNPFLGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHG 222 (352)
T ss_dssp CTTCTTTTCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEEC
T ss_pred CCCCcccCCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcC
Confidence 1111 1223 3478899999 7887776543
No 327
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=80.19 E-value=36 Score=31.21 Aligned_cols=65 Identities=17% Similarity=0.214 Sum_probs=49.9
Q ss_pred EEEEcCCCCEEEEEcCCeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCC
Q 022387 90 HISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ 165 (298)
Q Consensus 90 ~v~fs~dg~~lasgs~~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~ 165 (298)
+.-.+|..+.||-=..+.++|||+++..++....+ ..++..+.|. +.+.+++++ +..|..|++..
T Consensus 70 sAIMnP~~~iiALrag~~lQiFnle~K~klks~~~--~e~VvfWkWi-s~~~l~lVT--------~taVyHWsi~~ 134 (494)
T 1bpo_A 70 SAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTM--TDDVTFWKWI-SLNTVALVT--------DNAVYHWSMEG 134 (494)
T ss_dssp EEEECSSSSCEEEEETTEEEEEETTTTEEEEEEEC--SSCCCEEEEE-ETTEEEEEC--------SSEEEEEESSS
T ss_pred eeeeCCCCcEEEEecCCeEEEEchHHhhhhcceec--CCCceEEEec-CCCeEEEEc--------CCeeEEecccC
Confidence 45578888888877778899999999988877776 4567777775 456778877 46688888753
No 328
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=78.08 E-value=29 Score=28.92 Aligned_cols=184 Identities=12% Similarity=0.126 Sum_probs=89.1
Q ss_pred CEEEEEcC---CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCCcEEEEeec
Q 022387 98 GCFAAGTD---HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSF 174 (298)
Q Consensus 98 ~~lasgs~---~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~~~~~~~~ 174 (298)
.+++.|+. +.+.+||..+.+......+. ........... .+.+.+.+|.. ...-+.+.++|..+++....-..
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~~~~~~~-~~~lyv~GG~~--~~~~~~~~~~d~~~~~W~~~~~~ 88 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPF-EKRRDAACVFW-DNVVYILGGSQ--LFPIKRMDCYNVVKDSWYSKLGP 88 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCS-CCCBSCEEEEE-TTEEEEECCBS--SSBCCEEEEEETTTTEEEEEECC
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCC-cccceeEEEEE-CCEEEEEeCCC--CCCcceEEEEeCCCCeEEECCCC
Confidence 35556664 34678888777654322221 11111111122 33455555432 11346789999988765433222
Q ss_pred CC--ceEEEEEeCCeEEEEEC--------CeEEEEEcCCCeEEEEEeccCCCc-ceEEEEeCCCCeEEEEecCC------
Q 022387 175 RS--EVRSVKLRRDRIIVVLE--------QKIFVYNFADLKLLHQIETIANPK-GLCAVSQGVGSLVLVCPGLQ------ 237 (298)
Q Consensus 175 ~~--~v~~v~~~~~~l~v~~~--------~~I~iwd~~~~~~i~~~~~~~~~~-~~~~~s~~~d~~~la~sGs~------ 237 (298)
.. .-.++....+.+.+.+. +.+.+||+.+.+- ..+.....+. ...++.. ++.++++ |..
T Consensus 89 p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~~~--~~~iyv~-GG~~~~~~~ 164 (306)
T 3ii7_A 89 PTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESW-HTKPSMLTQRCSHGMVEA--NGLIYVC-GGSLGNNVS 164 (306)
T ss_dssp SSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEE-EEECCCSSCCBSCEEEEE--TTEEEEE-CCEESCTTT
T ss_pred CccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCce-EeCCCCcCCcceeEEEEE--CCEEEEE-CCCCCCCCc
Confidence 21 12233333555555432 3688999876542 2222211111 1122222 3366665 432
Q ss_pred ---CceEEEEEcCCcceEeecc---cccceeEEEECCCCCEEEEEeCCC-----CEEEEEECCCCc
Q 022387 238 ---KGQVRVEHYASKRTKFIMA---HDSRIACFALTQDGQLLATSSTKG-----TLVRIFNTLDGT 292 (298)
Q Consensus 238 ---dg~v~i~~~~~~~~~~~~~---H~~~V~~l~fspdg~~lAt~S~Dg-----t~IrIWd~~tg~ 292 (298)
-..+.++|..+..-..+.. ....-..+.+ ++++++.|+.++ . |.+||+.+.+
T Consensus 165 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~-~~~yd~~~~~ 227 (306)
T 3ii7_A 165 GRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDN-VEYYDIKLNE 227 (306)
T ss_dssp CEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCC-EEEEETTTTE
T ss_pred ccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCce-EEEeeCCCCc
Confidence 2346778877654332221 1111122222 678888887643 4 7889988763
No 329
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=76.56 E-value=35 Score=29.06 Aligned_cols=171 Identities=9% Similarity=-0.007 Sum_probs=83.4
Q ss_pred EcCCCCEEEEEcC-CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCC-----CC--CCCCeEEEEeCC
Q 022387 93 FNQDHGCFAAGTD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPD-----PQ--YPLNKVMIWDDH 164 (298)
Q Consensus 93 fs~dg~~lasgs~-~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--~~d~~v~iWD~~ 164 (298)
|+.+|.+|+-... +.-+||.++..+....+-. ... +.-+...++.++.+..... .. .....|+..++.
T Consensus 21 ~~~~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~--~~~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~d 96 (302)
T 3s25_A 21 FCESDGEVFFSNTNDNGRLYAMNIDGSNIHKLS--NDT--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRN 96 (302)
T ss_dssp EEEETTEEEEEEGGGTTEEEEEETTSCSCEEEE--EEE--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETT
T ss_pred EEEeCCEEEEEeCCCCceEEEEcCCCCCCEEcc--CCc--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCC
Confidence 4467887776542 2225665543221111110 111 2334556777777653210 00 013567777777
Q ss_pred CCcEEEEeecCCceEEEEEeCCeEEEEE---C--CeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEEecCCCc
Q 022387 165 QSRCIGELSFRSEVRSVKLRRDRIIVVL---E--QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKG 239 (298)
Q Consensus 165 ~~~~~~~~~~~~~v~~v~~~~~~l~v~~---~--~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs~dg 239 (298)
.++...-... ....+....+.+..+. + ..|...++.... ..++..+.. .++++++ ..|..+.....
T Consensus 97 g~~~~~l~~~--~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~----~~~~~~g--~~iy~t~~g~~ 167 (302)
T 3s25_A 97 GHGSTVLDPD--PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL----FTCNTSD--RYFYYNNPKNG 167 (302)
T ss_dssp SCCCEEEECS--CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC----CCSEEET--TEEEEECTTTC
T ss_pred CCcceEeecC--CccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc----eEeeEEC--CEEEEEeCCCc
Confidence 6653322222 2334555667777665 3 356566664322 334443322 3445655 44444344456
Q ss_pred eEEEEEcCCcceEeecccccceeEEEECCCCCEEEEEeCC
Q 022387 240 QVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTK 279 (298)
Q Consensus 240 ~v~i~~~~~~~~~~~~~H~~~V~~l~fspdg~~lAt~S~D 279 (298)
.|..-++..+....+.. +... ..++|+|.+|+=...+
T Consensus 168 ~Iy~~~l~g~~~~~l~~--~~~~-~~~~P~g~~iy~t~~~ 204 (302)
T 3s25_A 168 QLYRYDTASQSEALFYD--CNCY-KPVVLDDTNVYYMDVN 204 (302)
T ss_dssp CEEEEETTTTEEEEEEC--SCEE-EEEEEETTEEEEEEGG
T ss_pred eEEEEECCCCCEEEEeC--CCcc-ceeeecCCEEEEEEcC
Confidence 77776666654443322 2222 3466888877765543
No 330
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=75.36 E-value=41 Score=29.31 Aligned_cols=194 Identities=10% Similarity=0.008 Sum_probs=95.2
Q ss_pred EEEEcCCCCEEEEEc-C-CeEEEEEcCCCceEEEEeeec-----CC--ceEEEEE---ecCCCEEEEEeCCCCC------
Q 022387 90 HISFNQDHGCFAAGT-D-HGFRIYNCDPFREIFRRDFER-----GG--GIGVVEM---LFRCNILALVGGGPDP------ 151 (298)
Q Consensus 90 ~v~fs~dg~~lasgs-~-~gi~vw~~~~~~~~~~~~~~~-----~~--~~~~~~~---~~~~~~~~~~~~~~~~------ 151 (298)
+++|.+....|..++ - .+|..|+.+....... .+.. +. ....+.+ .+++.+++++..+...
T Consensus 17 ~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~ 95 (334)
T 2p9w_A 17 DTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQS 95 (334)
T ss_dssp CEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCC
T ss_pred CccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccc
Confidence 578987555555554 4 5577888765433222 3311 01 2345555 3454455433311100
Q ss_pred CCCCCeEEEEeCC---CCcEEEEeecC--------------CceEEEEEeCCeE-EEE--EC-CeEEEEEcCCCeEEEEE
Q 022387 152 QYPLNKVMIWDDH---QSRCIGELSFR--------------SEVRSVKLRRDRI-IVV--LE-QKIFVYNFADLKLLHQI 210 (298)
Q Consensus 152 ~~~d~~v~iWD~~---~~~~~~~~~~~--------------~~v~~v~~~~~~l-~v~--~~-~~I~iwd~~~~~~i~~~ 210 (298)
...++.|..+|+. +++.+...... .....++..++.- .+. .. +.|..++.. ++.+..+
T Consensus 96 ~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd-G~~~~~~ 174 (334)
T 2p9w_A 96 SHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD-GKTVSTF 174 (334)
T ss_dssp SSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT-SCCEEEE
T ss_pred cCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC-CCEEeee
Confidence 0125779999998 77766555432 1245566665432 222 23 455544443 2323322
Q ss_pred eccC----CC--cceEEEEeCCCCeEEEEecCCCceEEEEEcCCcce--Eeec--ccc---cceeE-EEECCCCCE-EEE
Q 022387 211 ETIA----NP--KGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRT--KFIM--AHD---SRIAC-FALTQDGQL-LAT 275 (298)
Q Consensus 211 ~~~~----~~--~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~~~--~~~~--~H~---~~V~~-l~fspdg~~-lAt 275 (298)
.... .. ..-+++.++ +.+|++..+ .|.+.-.|+..... ..+. +.. ..... +..-.+|+. |++
T Consensus 175 ~~~~~~~~~~~G~nGIv~~pd--g~~Liv~~~-~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~ 251 (334)
T 2p9w_A 175 AWESGNGGQRPGYSGITFDPH--SNKLIAFGG-PRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVG 251 (334)
T ss_dssp EECCCCSSSCCSCSEEEEETT--TTEEEEESS-SSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEE
T ss_pred eecCCCcccccCcceEEEeCC--CCEEEEEcC-CCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEE
Confidence 2111 11 124455554 455555456 88888888763221 1121 221 12333 333457777 666
Q ss_pred EeCCCCEEEEEECC
Q 022387 276 SSTKGTLVRIFNTL 289 (298)
Q Consensus 276 ~S~Dgt~IrIWd~~ 289 (298)
.+..+. +.+.+..
T Consensus 252 ~~~~~~-~~l~S~D 264 (334)
T 2p9w_A 252 ARAPYA-ISFRSWD 264 (334)
T ss_dssp EETTEE-EEEECSS
T ss_pred cCCCCE-EEEECCC
Confidence 666765 6666543
No 331
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=73.52 E-value=45 Score=28.93 Aligned_cols=136 Identities=8% Similarity=0.115 Sum_probs=68.8
Q ss_pred eEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCCc-EEEEee----cCCceEEEEEeCC-----eEEEEEC------
Q 022387 130 IGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSR-CIGELS----FRSEVRSVKLRRD-----RIIVVLE------ 193 (298)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~-~~~~~~----~~~~v~~v~~~~~-----~l~v~~~------ 193 (298)
...+.+..+++ +.++. .++.|+++|. .++ .+..+. .......++++++ .+.++..
T Consensus 31 P~~ia~~pdG~-l~V~e-------~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~ 101 (354)
T 3a9g_A 31 PWSIAPLGGGR-YLVTE-------RPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGG 101 (354)
T ss_dssp EEEEEEEETTE-EEEEE-------TTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGG
T ss_pred CeEEEEcCCCe-EEEEe-------CCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCC
Confidence 34455666665 33333 3478888873 443 222221 1235778899875 5665532
Q ss_pred ---CeEEEEEcCCC-------eE-EEEEecc-CCCcceEEEEeCCCCeEEEEecCC------------CceEEEEEcCCc
Q 022387 194 ---QKIFVYNFADL-------KL-LHQIETI-ANPKGLCAVSQGVGSLVLVCPGLQ------------KGQVRVEHYASK 249 (298)
Q Consensus 194 ---~~I~iwd~~~~-------~~-i~~~~~~-~~~~~~~~~s~~~d~~~la~sGs~------------dg~v~i~~~~~~ 249 (298)
+.|..|+.... +. +..+... .+....++|. +|+.++++.|+. .|.|.-.+.+.+
T Consensus 102 ~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~--pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~ 179 (354)
T 3a9g_A 102 HIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFG--PDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGR 179 (354)
T ss_dssp CEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEEC--TTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSC
T ss_pred CcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEEC--CCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCC
Confidence 56777776543 11 1123311 1122345554 455666644432 244444444332
Q ss_pred --------ceEe-ecccccceeEEEECC-CCCEEEEEe
Q 022387 250 --------RTKF-IMAHDSRIACFALTQ-DGQLLATSS 277 (298)
Q Consensus 250 --------~~~~-~~~H~~~V~~l~fsp-dg~~lAt~S 277 (298)
.... ..+| .....|+|+| +|.++++-.
T Consensus 180 ~p~~npf~~~~i~a~G~-rnp~Gla~d~~~g~l~v~d~ 216 (354)
T 3a9g_A 180 PPADNPFPNSPIWSYGH-RNPQGIDWHRASGVMVATEH 216 (354)
T ss_dssp CCTTSSSTTCCEEEECC-SCCCEEEECTTTCCEEEEEC
T ss_pred CCCCCCCCCCcEEEEcc-CCcceEEEeCCCCCEEEEec
Confidence 1111 1233 3467899999 788777753
No 332
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=73.46 E-value=40 Score=28.26 Aligned_cols=187 Identities=14% Similarity=0.119 Sum_probs=88.7
Q ss_pred EEEEEcCCeEEEEEcCCCceEEEEeee-cCCceEEEEEecCCCEEEEEeC----CCCCCCCCCeEEEEeCCCCcEEEEee
Q 022387 99 CFAAGTDHGFRIYNCDPFREIFRRDFE-RGGGIGVVEMLFRCNILALVGG----GPDPQYPLNKVMIWDDHQSRCIGELS 173 (298)
Q Consensus 99 ~lasgs~~gi~vw~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~d~~v~iWD~~~~~~~~~~~ 173 (298)
+++.|+ +.+.+||..+.+... ..+. ............+...+++.+. ..........+.+||..+++....-.
T Consensus 7 l~~~GG-~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 84 (315)
T 4asc_A 7 IFMISE-EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPP 84 (315)
T ss_dssp EEEEET-TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCC
T ss_pred EEEEcC-CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCC
Confidence 344555 567789988877643 2221 0123333334445554444441 11000012347788988876432211
Q ss_pred cCC--ceEEEEEeCCeEEEEEC----------CeEEEEEcCCCeEEEEEeccCCCc-ceEEEEeCCCCeEEEEecCCC--
Q 022387 174 FRS--EVRSVKLRRDRIIVVLE----------QKIFVYNFADLKLLHQIETIANPK-GLCAVSQGVGSLVLVCPGLQK-- 238 (298)
Q Consensus 174 ~~~--~v~~v~~~~~~l~v~~~----------~~I~iwd~~~~~~i~~~~~~~~~~-~~~~~s~~~d~~~la~sGs~d-- 238 (298)
... .-.++....+.+.+.+. +.+.+||+.+.+= ..+.....+. ...++..+ +.++++.|..+
T Consensus 85 ~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~~~~--~~iyv~GG~~~~~ 161 (315)
T 4asc_A 85 LPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKW-GESDPLPYVVYGHTVLSHM--DLVYVIGGKGSDR 161 (315)
T ss_dssp BSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEE-EECCCCSSCCBSCEEEEET--TEEEEECCBCTTS
T ss_pred CCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcE-eECCCCCCcccceeEEEEC--CEEEEEeCCCCCC
Confidence 111 11223333555555432 3688999876542 2222111111 12222233 36666634312
Q ss_pred ---ceEEEEEcCCcceEeec---ccccceeEEEECCCCCEEEEEeCCCC----EEEEEECCCCc
Q 022387 239 ---GQVRVEHYASKRTKFIM---AHDSRIACFALTQDGQLLATSSTKGT----LVRIFNTLDGT 292 (298)
Q Consensus 239 ---g~v~i~~~~~~~~~~~~---~H~~~V~~l~fspdg~~lAt~S~Dgt----~IrIWd~~tg~ 292 (298)
..+.++|..+..-..+. .....-.++.+ ++++++.|+.++. .+.+||+.+.+
T Consensus 162 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 162 KCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp CBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred cccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCe
Confidence 35777887665422221 11111122222 6788888887652 37888887763
No 333
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=69.69 E-value=36 Score=28.07 Aligned_cols=100 Identities=10% Similarity=-0.021 Sum_probs=55.0
Q ss_pred ceEEEEEeCCeEE-EEECCeEEEEEcCCCeE-----EEEEeccCCCcceEEEEeCCCCeEEEEecCCCceEEEEEcCC-c
Q 022387 177 EVRSVKLRRDRII-VVLEQKIFVYNFADLKL-----LHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYAS-K 249 (298)
Q Consensus 177 ~v~~v~~~~~~l~-v~~~~~I~iwd~~~~~~-----i~~~~~~~~~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~-~ 249 (298)
.+..++|+++..+ ++.++.+.-.+..+.+. ..+.........--++-+++++.+.++ .||.|.-++--+ .
T Consensus 42 ~~~~laf~P~G~LYaV~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav---~dG~iyr~~pP~~~ 118 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGVLNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV---SKDKLYKASPPQSD 118 (236)
T ss_dssp TCSEEEECTTSCEEEEETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE---ETTEEEEESCCCST
T ss_pred cceeEEECCCccEEEEeCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe---CCCEEEEeCCCcCC
Confidence 5668889976433 33567655544433110 011111112222346667788888884 568876555321 1
Q ss_pred ce------Eee-cccccceeEEEECCCCCEEEEEeCCCC
Q 022387 250 RT------KFI-MAHDSRIACFALTQDGQLLATSSTKGT 281 (298)
Q Consensus 250 ~~------~~~-~~H~~~V~~l~fspdg~~lAt~S~Dgt 281 (298)
.- ..+ ..-=..+..|.|.|+|.+.|.. |+.
T Consensus 119 ~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ 155 (236)
T 1tl2_A 119 TDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQ 155 (236)
T ss_dssp TCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTE
T ss_pred CCceeccccEeccCCCCceEEEEECCCceEEEEe--CCc
Confidence 11 111 1111468999999999999988 776
No 334
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=67.45 E-value=54 Score=27.41 Aligned_cols=193 Identities=11% Similarity=0.120 Sum_probs=87.9
Q ss_pred EEcCCCCEEEEEcC----Ce--------EEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCC-CCCCCCCeE
Q 022387 92 SFNQDHGCFAAGTD----HG--------FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGP-DPQYPLNKV 158 (298)
Q Consensus 92 ~fs~dg~~lasgs~----~g--------i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~v 158 (298)
....++.+++.|+. ++ +.+||..+.+......+. ...........+. .+.+.+|.. ......+.+
T Consensus 52 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~ 129 (318)
T 2woz_A 52 IVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLP-SARCLFGLGEVDD-KIYVVAGKDLQTEASLDSV 129 (318)
T ss_dssp EECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBS-SCBCSCEEEEETT-EEEEEEEEBTTTCCEEEEE
T ss_pred EEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCC-ccccccceEEECC-EEEEEcCccCCCCcccceE
Confidence 34567788777772 11 345676665543222221 1111111112233 444444321 000012568
Q ss_pred EEEeCCCCcEEEEeecCC--ceEEEEEeCCeEEEEEC--------CeEEEEEcCCCeEEEEEeccCCCcc-eEEEEeCCC
Q 022387 159 MIWDDHQSRCIGELSFRS--EVRSVKLRRDRIIVVLE--------QKIFVYNFADLKLLHQIETIANPKG-LCAVSQGVG 227 (298)
Q Consensus 159 ~iWD~~~~~~~~~~~~~~--~v~~v~~~~~~l~v~~~--------~~I~iwd~~~~~~i~~~~~~~~~~~-~~~~s~~~d 227 (298)
.++|..+.+....-.... .-.++....+.+.+.+. +.+.+||+.+.+= ..+.....+.. ..+... +
T Consensus 130 ~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~ 206 (318)
T 2woz_A 130 LCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDW-KDLAPMKTPRSMFGVAIH--K 206 (318)
T ss_dssp EEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEE-EEECCCSSCCBSCEEEEE--T
T ss_pred EEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEE-EECCCCCCCcccceEEEE--C
Confidence 888988876443222221 11223334555555431 3689999976542 22222111111 112222 2
Q ss_pred CeEEEEecCCC----ceEEEEEcCCcceEeec---ccccceeEEEECCCCCEEEEEeCC--------------CCEEEEE
Q 022387 228 SLVLVCPGLQK----GQVRVEHYASKRTKFIM---AHDSRIACFALTQDGQLLATSSTK--------------GTLVRIF 286 (298)
Q Consensus 228 ~~~la~sGs~d----g~v~i~~~~~~~~~~~~---~H~~~V~~l~fspdg~~lAt~S~D--------------gt~IrIW 286 (298)
+.++++.|..+ ..+.++|..+..-..+. ........+. -++++++.|+.+ .. |.+|
T Consensus 207 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~~~~~-v~~y 283 (318)
T 2woz_A 207 GKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVS--LAGSLYAIGGFAMIQLESKEFAPTEVND-IWKY 283 (318)
T ss_dssp TEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEE--ETTEEEEECCBCCBC----CCBCCBCCC-EEEE
T ss_pred CEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEE--ECCEEEEECCeeccCCCCceeccceeee-EEEE
Confidence 36666544332 24556777665422221 1111122222 257888888764 34 7788
Q ss_pred ECCCCc
Q 022387 287 NTLDGT 292 (298)
Q Consensus 287 d~~tg~ 292 (298)
|+.+.+
T Consensus 284 d~~~~~ 289 (318)
T 2woz_A 284 EDDKKE 289 (318)
T ss_dssp ETTTTE
T ss_pred eCCCCE
Confidence 887753
No 335
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=66.73 E-value=59 Score=27.61 Aligned_cols=72 Identities=10% Similarity=0.106 Sum_probs=34.0
Q ss_pred CCCEEEEEcC--CeEEEEEcCC--CceEEEEeeec-CCceEEEEEecCCCEEEEEeCC-C--C-CCCCCCeEEEEeCCCC
Q 022387 96 DHGCFAAGTD--HGFRIYNCDP--FREIFRRDFER-GGGIGVVEMLFRCNILALVGGG-P--D-PQYPLNKVMIWDDHQS 166 (298)
Q Consensus 96 dg~~lasgs~--~gi~vw~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~--~-~~~~d~~v~iWD~~~~ 166 (298)
++++++.|+. +.+.+||..+ .+......+ . ...........+ +.+.+.+|. . + ....-+.+.++|..+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~-p~~~R~~~~~~~~~-~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAF-PGGPRDQATSAFID-GNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCC-TTCCCBSCEEEEET-TEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCC-CCCcCccceEEEEC-CEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 6777777764 3366778764 333222111 1 111111112223 345555543 1 0 0011356889999887
Q ss_pred cEE
Q 022387 167 RCI 169 (298)
Q Consensus 167 ~~~ 169 (298)
+..
T Consensus 97 ~W~ 99 (357)
T 2uvk_A 97 SWV 99 (357)
T ss_dssp EEE
T ss_pred cEE
Confidence 644
No 336
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=66.13 E-value=67 Score=28.01 Aligned_cols=151 Identities=13% Similarity=0.130 Sum_probs=72.7
Q ss_pred eEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCCcEE--EEee-----cCCceEEEEEeCC-----eEEEEE----C
Q 022387 130 IGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCI--GELS-----FRSEVRSVKLRRD-----RIIVVL----E 193 (298)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~~~--~~~~-----~~~~v~~v~~~~~-----~l~v~~----~ 193 (298)
...+.+.+++..+++-- ..+.|++++...++.. ..+. ...-...++++++ .+.+.. .
T Consensus 34 P~~ia~~pdG~llVter-------~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~ 106 (347)
T 3das_A 34 PWGLAPLPGGDLLVSSR-------DEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASD 106 (347)
T ss_dssp EEEEEECTTSCEEEEET-------TTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSS
T ss_pred ceEEEEcCCCcEEEEEe-------cCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCC
Confidence 34455556665443322 2477888876555432 1111 1234678899874 355432 3
Q ss_pred CeEEEEEcCC----------CeEE-EEEec-cCCCcceEEEEeCCCCeEEEEecCC------------CceEEEEEcCCc
Q 022387 194 QKIFVYNFAD----------LKLL-HQIET-IANPKGLCAVSQGVGSLVLVCPGLQ------------KGQVRVEHYASK 249 (298)
Q Consensus 194 ~~I~iwd~~~----------~~~i-~~~~~-~~~~~~~~~~s~~~d~~~la~sGs~------------dg~v~i~~~~~~ 249 (298)
+.|.-|.+.. .+.+ ..+.. ..+....+.|. +|+.+++..|+. .|.|.-.+...+
T Consensus 107 ~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fg--pDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ 184 (347)
T 3das_A 107 NRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFG--PDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGE 184 (347)
T ss_dssp EEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEEC--TTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSS
T ss_pred CEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCC--CCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCC
Confidence 4566666543 1222 12222 11223345554 455666654531 233333333322
Q ss_pred --------ceEe-ecccccceeEEEECCCCCEEEEE-eCCCCEEEEEECCCC
Q 022387 250 --------RTKF-IMAHDSRIACFALTQDGQLLATS-STKGTLVRIFNTLDG 291 (298)
Q Consensus 250 --------~~~~-~~~H~~~V~~l~fspdg~~lAt~-S~Dgt~IrIWd~~tg 291 (298)
.... -.+| .....|+|+|+|.++++= +.|+. =.|--+..|
T Consensus 185 ip~~nPf~~~~i~a~G~-RNp~Gla~dp~G~L~~~d~g~~~~-deln~i~~G 234 (347)
T 3das_A 185 PAPGNPFPGSPVYSYGH-RNVQGLAWDDKQRLFASEFGQDTW-DELNAIKPG 234 (347)
T ss_dssp BCTTCSSTTCCEEEBCC-SBCCEEEECTTCCEEEEECCSSSC-EEEEEECTT
T ss_pred ccCCCCCCCCeEEeeCC-CCcceEEECCCCCEEEEecCCCCC-ceeeEEcCC
Confidence 1111 2244 356789999999888775 33443 334333333
No 337
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=65.98 E-value=95 Score=29.71 Aligned_cols=196 Identities=12% Similarity=0.088 Sum_probs=92.7
Q ss_pred CCCCEEEEEcC-----CeEEEEEcCCCceEEEE-ee----ecCCceEEEEEecC-CCEEEEEeCCCCCCCCCCeEEEEeC
Q 022387 95 QDHGCFAAGTD-----HGFRIYNCDPFREIFRR-DF----ERGGGIGVVEMLFR-CNILALVGGGPDPQYPLNKVMIWDD 163 (298)
Q Consensus 95 ~dg~~lasgs~-----~gi~vw~~~~~~~~~~~-~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~v~iWD~ 163 (298)
-++.+++.|+. +.+.+||..+..+.... .+ .............. .+.+.+.||.......-+.+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 56777777774 23567788777654333 20 00111112222221 3445555553221101256889999
Q ss_pred CCCcEEEEeecCC--ceEEEEE-eCCeEEEEEC----CeEEEEEcCCCeEEEEEec---cC-CCcceEEEEeCCC-CeEE
Q 022387 164 HQSRCIGELSFRS--EVRSVKL-RRDRIIVVLE----QKIFVYNFADLKLLHQIET---IA-NPKGLCAVSQGVG-SLVL 231 (298)
Q Consensus 164 ~~~~~~~~~~~~~--~v~~v~~-~~~~l~v~~~----~~I~iwd~~~~~~i~~~~~---~~-~~~~~~~~s~~~d-~~~l 231 (298)
.+.+....-.... .-.++.. ..+.+.+.+. +.+.+||..+.+= ..+.. .. ......++..+.+ +.++
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W-~~~~~~g~~p~~r~~~~a~v~~~~~~~iy 554 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIF-KDVTPKDEFFQNSLVSAGLEFDPVSKQGI 554 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEE-EECCCSSGGGGSCCBSCEEEEETTTTEEE
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCce-EEccCCCCCCCcccceeEEEEeCCCCEEE
Confidence 8875433211111 1122333 3555555542 2689999876542 22221 00 1111122222222 4666
Q ss_pred EEecCC-C-----ceEEEEEcCCcc------eEeecc---cccceeEEEECCCCCEEEEEeCC--------CCEEEEEEC
Q 022387 232 VCPGLQ-K-----GQVRVEHYASKR------TKFIMA---HDSRIACFALTQDGQLLATSSTK--------GTLVRIFNT 288 (298)
Q Consensus 232 a~sGs~-d-----g~v~i~~~~~~~------~~~~~~---H~~~V~~l~fspdg~~lAt~S~D--------gt~IrIWd~ 288 (298)
++.|.. + ..+.+||..+.. -..+.. ....-.+++...++++++.||.+ .. |.+||+
T Consensus 555 v~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~-v~~yd~ 633 (695)
T 2zwa_A 555 ILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNS-IISLDP 633 (695)
T ss_dssp EECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTS-EEEEET
T ss_pred EECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCe-EEEEEC
Confidence 663332 2 357778877655 122211 11111122333447888888743 45 889998
Q ss_pred CCCc
Q 022387 289 LDGT 292 (298)
Q Consensus 289 ~tg~ 292 (298)
.+.+
T Consensus 634 ~t~~ 637 (695)
T 2zwa_A 634 LSET 637 (695)
T ss_dssp TTTE
T ss_pred CCCe
Confidence 8764
No 338
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=65.44 E-value=67 Score=27.71 Aligned_cols=22 Identities=32% Similarity=0.501 Sum_probs=17.4
Q ss_pred cceeEEEECCCCCEEEEEe-CCC
Q 022387 259 SRIACFALTQDGQLLATSS-TKG 280 (298)
Q Consensus 259 ~~V~~l~fspdg~~lAt~S-~Dg 280 (298)
..++.|++.|||.++++.. .+|
T Consensus 315 ~rp~~v~~~pdG~lyv~~~~~~g 337 (352)
T 2ism_A 315 GRLREVQVGPDGALYVTTSNRDG 337 (352)
T ss_dssp CCEEEEEECTTSCEEEEECSTTT
T ss_pred CCeeEEEECCCCcEEEEEeCCCC
Confidence 5789999999998877764 344
No 339
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=63.69 E-value=1e+02 Score=29.15 Aligned_cols=195 Identities=10% Similarity=-0.012 Sum_probs=102.5
Q ss_pred CCeEEEEEcCCCCEEEEE-cC-CeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeC
Q 022387 86 PTLLHISFNQDHGCFAAG-TD-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (298)
Q Consensus 86 ~~V~~v~fs~dg~~lasg-s~-~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~ 163 (298)
..+.+++|.+.+..|..+ .. +.|..++.+.......... .......+++.+....+..+.. ..+.|.+.++
T Consensus 349 ~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~-~~~~p~GlAvD~~~~~lY~tD~------~~~~I~v~~~ 421 (619)
T 3s94_A 349 RHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTA-QIAHPDGIAVDWVARNLYWTDT------GTDRIEVTRL 421 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS-SCSCCCEEEEETTTTEEEEEET------TTTEEEEEET
T ss_pred CccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEEC-CCCCcCceEEecccCcEEEEeC------CCCcEEEEeC
Confidence 357889999865555444 33 5566777765433222211 1133445566654555555543 2477888887
Q ss_pred CCCcEEEEee-cCCceEEEEEeC--CeEEEEEC---CeEEEEEcCCCeEEEEEec-cCCCcceEEEEeCCCCeEEEEecC
Q 022387 164 HQSRCIGELS-FRSEVRSVKLRR--DRIIVVLE---QKIFVYNFADLKLLHQIET-IANPKGLCAVSQGVGSLVLVCPGL 236 (298)
Q Consensus 164 ~~~~~~~~~~-~~~~v~~v~~~~--~~l~v~~~---~~I~iwd~~~~~~i~~~~~-~~~~~~~~~~s~~~d~~~la~sGs 236 (298)
........+. .-.....+++++ ..+.++.- ..|...++..... ..+.. .-.....+++.++.+ .+.. +-+
T Consensus 422 ~G~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~-~~l~~~~l~~P~GlalD~~~~-~LY~-aD~ 498 (619)
T 3s94_A 422 NGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDR-VVLVNTSLGWPNGLALDYDEG-KIYW-GDA 498 (619)
T ss_dssp TSCSCEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEECSSCSCEEEEEEETTTT-EEEE-EET
T ss_pred CCCeEEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCcc-EEEEeCCCCCCeeeEEcccCC-EEEE-EEC
Confidence 6543221121 123567788876 34555432 4666666543222 22221 112223455554433 3333 256
Q ss_pred CCceEEEEEcCCcceEee-cccccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCc
Q 022387 237 QKGQVRVEHYASKRTKFI-MAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGT 292 (298)
Q Consensus 237 ~dg~v~i~~~~~~~~~~~-~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~ 292 (298)
..+.|...++......++ ...-.....|++..+ .++.|=...+. |...|..+|.
T Consensus 499 ~~~~I~~~~~dG~~~~~~~~~~l~~P~glav~~~-~ly~tD~~~~~-I~~~~k~~g~ 553 (619)
T 3s94_A 499 KTDKIEVMNTDGTGRRVLVEDKIPHIFGFTLLGD-YVYWTDWQRRS-IERVHKRSAE 553 (619)
T ss_dssp TTTEEEEEESSSCCCEEEEECCCCSSCCEEEETT-EEEEECTTSSC-EEEEESSSCC
T ss_pred CCCEEEEEecCCCceEEEeccCCCCcEEEEEECC-EEEEeecCCCe-EEEEEcCCCc
Confidence 667888877765543332 222334556676554 55666555666 8788887773
No 340
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=56.32 E-value=1.4e+02 Score=28.50 Aligned_cols=136 Identities=8% Similarity=0.047 Sum_probs=69.0
Q ss_pred CCeEEEEeCCCCcEEEEe-e-----cCC--ceEEEEEe--CCeEEEEEC--------CeEEEEEcCCCeEEEEEeccCCC
Q 022387 155 LNKVMIWDDHQSRCIGEL-S-----FRS--EVRSVKLR--RDRIIVVLE--------QKIFVYNFADLKLLHQIETIANP 216 (298)
Q Consensus 155 d~~v~iWD~~~~~~~~~~-~-----~~~--~v~~v~~~--~~~l~v~~~--------~~I~iwd~~~~~~i~~~~~~~~~ 216 (298)
-+.+.++|..+++....- . ... .-.++... .+.+.+.+. +.+.+||+.+.+= ..+.....+
T Consensus 411 ~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W-~~~~~~p~~ 489 (695)
T 2zwa_A 411 VNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREW-SMIKSLSHT 489 (695)
T ss_dssp CCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEE-EECCCCSBC
T ss_pred cCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcE-EECCCCCCC
Confidence 356889999887654322 2 111 12233333 555555432 3688899876432 111111111
Q ss_pred cceEEEEeCCCCeEEEEecCCCc--eEEEEEcCCcceEeec------ccccceeEEEECCC-CCEEEEEeC--CC----C
Q 022387 217 KGLCAVSQGVGSLVLVCPGLQKG--QVRVEHYASKRTKFIM------AHDSRIACFALTQD-GQLLATSST--KG----T 281 (298)
Q Consensus 217 ~~~~~~s~~~d~~~la~sGs~dg--~v~i~~~~~~~~~~~~------~H~~~V~~l~fspd-g~~lAt~S~--Dg----t 281 (298)
....+...-.++.++++ |+.++ .+.+||..+..=..+. .....-.++.+..+ +++++.||. ++ .
T Consensus 490 R~~h~~~~~~~~~iyv~-GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~ 568 (695)
T 2zwa_A 490 RFRHSACSLPDGNVLIL-GGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSD 568 (695)
T ss_dssp CBSCEEEECTTSCEEEE-CCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCC
T ss_pred cccceEEEEcCCEEEEE-CCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeC
Confidence 11111121113466665 54433 5777887765422222 11222344566655 788888876 32 2
Q ss_pred EEEEEECCCCc
Q 022387 282 LVRIFNTLDGT 292 (298)
Q Consensus 282 ~IrIWd~~tg~ 292 (298)
.+.+||+.+.+
T Consensus 569 ~v~~yd~~~~~ 579 (695)
T 2zwa_A 569 KAIIFKYDAEN 579 (695)
T ss_dssp EEEEEEECTTC
T ss_pred cEEEEEccCCc
Confidence 38889988765
No 341
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=55.15 E-value=19 Score=29.73 Aligned_cols=62 Identities=11% Similarity=0.088 Sum_probs=37.2
Q ss_pred EEEeCCCCeEEEEecCCCceEEEEEcCCcceEeecccccc--------eeEEEECCCCCEEEEEeCCCCEEEEEEC
Q 022387 221 AVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAHDSR--------IACFALTQDGQLLATSSTKGTLVRIFNT 288 (298)
Q Consensus 221 ~~s~~~d~~~la~sGs~dg~v~i~~~~~~~~~~~~~H~~~--------V~~l~fspdg~~lAt~S~Dgt~IrIWd~ 288 (298)
.+.++|++.+.|+ .+|.+.-.+..+.......+-... -.++.|.|+|.+.|+ + ||. |.=++-
T Consensus 45 ~laf~P~G~LYaV---~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav-~-dG~-iyr~~p 114 (236)
T 1tl2_A 45 FLFLSPGGELYGV---LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV-S-KDK-LYKASP 114 (236)
T ss_dssp EEEECTTSCEEEE---ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE-E-TTE-EEEESC
T ss_pred eEEECCCccEEEE---eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe-C-CCE-EEEeCC
Confidence 5555567788875 566655544433111111111222 489999999999999 4 688 655554
No 342
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=53.60 E-value=1.3e+02 Score=27.15 Aligned_cols=32 Identities=22% Similarity=0.306 Sum_probs=22.7
Q ss_pred cceeEEEECCCCCEEEEE-eCCCCEEEEEECCCC
Q 022387 259 SRIACFALTQDGQLLATS-STKGTLVRIFNTLDG 291 (298)
Q Consensus 259 ~~V~~l~fspdg~~lAt~-S~Dgt~IrIWd~~tg 291 (298)
..+..|+|+|+|.++++- +.|+. -.|.-+..|
T Consensus 228 RNp~gla~dp~G~L~~~d~g~~~~-dein~i~~G 260 (454)
T 1cru_A 228 RNPQGLAFTPNGKLLQSEQGPNSD-DEINLIVKG 260 (454)
T ss_dssp SEEEEEEECTTSCEEEEEECSSSC-EEEEECCTT
T ss_pred CCcceEEECCCCCEEEEecCCCCC-eEEEEecCC
Confidence 467899999999877765 44555 566666554
No 343
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=52.37 E-value=1e+02 Score=25.65 Aligned_cols=108 Identities=11% Similarity=0.181 Sum_probs=50.5
Q ss_pred CCCEEEEEcCC--------eEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCCc
Q 022387 96 DHGCFAAGTDH--------GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSR 167 (298)
Q Consensus 96 dg~~lasgs~~--------gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~ 167 (298)
++++++.|+.+ .+.+||..+.+......+. ...........+ +.+.+.+|........+.+.++|..+.+
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLP-IKVYGHNVISHN-GMIYCLGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCS-SCEESCEEEEET-TEEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCC-CcccccEEEEEC-CEEEEEcCCCCCCCccceEEEEcCCCCE
Confidence 56666666531 1446677666554332221 111111111223 3455555421111123568999998876
Q ss_pred EEEEeecCC--ceEEEEEeCCeEEEEEC-------CeEEEEEcCCCe
Q 022387 168 CIGELSFRS--EVRSVKLRRDRIIVVLE-------QKIFVYNFADLK 205 (298)
Q Consensus 168 ~~~~~~~~~--~v~~v~~~~~~l~v~~~-------~~I~iwd~~~~~ 205 (298)
....-.... ...++....+.+.+.+. +.+.+||+.+.+
T Consensus 187 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 187 WKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp EEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred EEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 443222211 12233334555555431 467889986654
No 344
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=50.06 E-value=28 Score=33.81 Aligned_cols=34 Identities=21% Similarity=0.272 Sum_probs=27.6
Q ss_pred EEecCCCEEEEEeCCCCCCCCCCeEEEEeCCCCcEEEEeec
Q 022387 134 EMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSF 174 (298)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~~~~~~~~ 174 (298)
++.++...+++.+ .|+++|+||+.+++++.+...
T Consensus 226 ~~~~~~~fLftL~-------~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 226 CKLFHERYLIVLT-------QNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEETTTEEEEEE-------TTCEEEEEETTTTEEEEEEET
T ss_pred EeccCCcEEEEEE-------cCCeEEEEEcCCCceEEeecc
Confidence 3355667778888 789999999999998887665
No 345
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=48.31 E-value=1.2e+02 Score=28.66 Aligned_cols=93 Identities=14% Similarity=0.126 Sum_probs=59.1
Q ss_pred eEEEEEcCC----C-eEEEEEeccCCCcceEEEEeCCCCeEEEEecCCCceEEEEEcCCc------ce----Eeecc---
Q 022387 195 KIFVYNFAD----L-KLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASK------RT----KFIMA--- 256 (298)
Q Consensus 195 ~I~iwd~~~----~-~~i~~~~~~~~~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~------~~----~~~~~--- 256 (298)
.|.+.|.+. . ..++.+....+|.+ +.+ +||+.+++++|--+.+|.+++++.- .+ ..+.+
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHG-v~v--sPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e 375 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHG-CNT--SSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE 375 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCC-EEE--CTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcc-eee--CCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc
Confidence 466666654 1 23344444444443 333 4566888888999999999987631 11 01111
Q ss_pred cccceeEEEECCCCCEEEEEeCCCCEEEEEECCCC
Q 022387 257 HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDG 291 (298)
Q Consensus 257 H~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg 291 (298)
-.-.....+|.++|.-..|---|.. |--|++...
T Consensus 376 ~GlGPlHt~Fd~~G~aYTtlfidSq-vvkWni~~a 409 (638)
T 3sbq_A 376 LGLGPLHTTFDGRGNAYTTLFIDSQ-VVKWNMEEA 409 (638)
T ss_dssp CCSCEEEEEECSSSEEEEEETTTTE-EEEEEHHHH
T ss_pred CCCcccEEEECCCCceEeeeeecce-EEEEeccHH
Confidence 1234678899999977777778888 889998753
No 346
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=45.92 E-value=34 Score=29.94 Aligned_cols=35 Identities=20% Similarity=0.174 Sum_probs=28.3
Q ss_pred ccceeEEEECCCCCEEEEEeCCCCEEEEEECCCCcE
Q 022387 258 DSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTL 293 (298)
Q Consensus 258 ~~~V~~l~fspdg~~lAt~S~Dgt~IrIWd~~tg~~ 293 (298)
-...+.|+|.|||.+|++--..|+ |++++..+|+.
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~-I~~v~~~~g~~ 65 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEAT-ITRVDAKTGRK 65 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCE-EEEECTTTCCE
T ss_pred CCCceEEEEcCCCcEEEEEecCCE-EEEEECCCCcE
Confidence 456889999999999988866888 88888766653
No 347
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=45.81 E-value=1.6e+02 Score=26.03 Aligned_cols=93 Identities=10% Similarity=0.073 Sum_probs=0.0
Q ss_pred eEEEEEcCCC--eEEEEEecc------CCCcceEEEE-eCCC----CeEEEEecCCCceEEEEEcCCcceEeeccc----
Q 022387 195 KIFVYNFADL--KLLHQIETI------ANPKGLCAVS-QGVG----SLVLVCPGLQKGQVRVEHYASKRTKFIMAH---- 257 (298)
Q Consensus 195 ~I~iwd~~~~--~~i~~~~~~------~~~~~~~~~s-~~~d----~~~la~sGs~dg~v~i~~~~~~~~~~~~~H---- 257 (298)
+|.+||+.+. +.++++.-. .....-+.+. ..++ +.+.-++-+..+-|.|+|+.++....+. |
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~-~~~~~ 202 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVT-HPTFK 202 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEE-CGGGS
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEc-cCCCc
Q ss_pred ----------------ccceeEEEECCC----CCEEEEEeCCCCEEEEEECCC
Q 022387 258 ----------------DSRIACFALTQD----GQLLATSSTKGTLVRIFNTLD 290 (298)
Q Consensus 258 ----------------~~~V~~l~fspd----g~~lAt~S~Dgt~IrIWd~~t 290 (298)
...|..|++||+ ++.|-=....+. ++|.+.+
T Consensus 203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~--~ly~V~T 253 (381)
T 3q6k_A 203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAI--KVYSVNT 253 (381)
T ss_dssp CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCS--EEEEEEH
T ss_pred cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCC--cEEEEEH
No 348
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=44.15 E-value=43 Score=33.62 Aligned_cols=33 Identities=18% Similarity=0.385 Sum_probs=25.5
Q ss_pred EecCCCEEEEEeCCCCCCCCCCeEEEEeCCCCcEEEEeec
Q 022387 135 MLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSF 174 (298)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~~~~~~~~ 174 (298)
...+...+.+.+ .|+++|+|++.+++++.+...
T Consensus 243 ~~~~~~~lftl~-------~D~~LRiWsl~t~~~v~t~dL 275 (950)
T 4gq2_M 243 FLSTYNVLVMLS-------LDYKLKVLDLSTNQCVETIEL 275 (950)
T ss_dssp EETTTTEEEEEE-------TTCEEEEEETTTTEEEEEEEC
T ss_pred ecCCCcEEEEEE-------CCCEEEEEECCCCCeEeeecc
Confidence 344455666777 789999999999999887654
No 349
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=42.56 E-value=1.6e+02 Score=25.24 Aligned_cols=53 Identities=15% Similarity=0.284 Sum_probs=31.9
Q ss_pred CCeEEEEecCCCceEEEEEcCCc-ce---Eee-cccccceeEEEECCCCCEEEEEe-CCC
Q 022387 227 GSLVLVCPGLQKGQVRVEHYASK-RT---KFI-MAHDSRIACFALTQDGQLLATSS-TKG 280 (298)
Q Consensus 227 d~~~la~sGs~dg~v~i~~~~~~-~~---~~~-~~H~~~V~~l~fspdg~~lAt~S-~Dg 280 (298)
++.+++. .-..+.|...+++.. .. ..+ ..-...+..|++.|||.++++.. .+|
T Consensus 276 ~G~l~v~-~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~~~~G 334 (354)
T 3a9g_A 276 RGWLLIA-CLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTSNRDG 334 (354)
T ss_dssp TTEEEEE-ETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEECTTSS
T ss_pred CCcEEEE-EcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEeCCCC
Confidence 4566653 445556666555432 22 122 22245799999999999888875 354
No 350
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=34.32 E-value=45 Score=34.19 Aligned_cols=31 Identities=16% Similarity=0.350 Sum_probs=24.4
Q ss_pred cCCCEEEEEeCCCCCCCCCCeEEEEeCCCCcEEEEeec
Q 022387 137 FRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSF 174 (298)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~d~~v~iWD~~~~~~~~~~~~ 174 (298)
.+...+++.+ .|+++||||+.+++++.+...
T Consensus 247 ~~~~~lftL~-------~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 247 STYNVLVMLS-------LDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp TTTTEEEEEB-------TTCEEEEEETTTTEEEEEEEC
T ss_pred CCccEEEEEe-------CCCEEEEEECCCCCeEEeech
Confidence 3445666666 789999999999999888654
No 351
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=34.18 E-value=31 Score=24.15 Aligned_cols=17 Identities=18% Similarity=0.178 Sum_probs=15.4
Q ss_pred CEEEEEECCCCcEEEec
Q 022387 281 TLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 281 t~IrIWd~~tg~~l~~~ 297 (298)
..|.|||+.+|.++.+|
T Consensus 17 E~V~IvNvnNG~RfeTY 33 (97)
T 1uhe_A 17 MKVEIVDVNNGERFSTY 33 (97)
T ss_dssp CEEEEEETTTCCEEEEE
T ss_pred CEEEEEECCCCceEEEE
Confidence 35999999999999998
No 352
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=33.99 E-value=3e+02 Score=25.84 Aligned_cols=133 Identities=13% Similarity=0.169 Sum_probs=74.4
Q ss_pred eEEEEeCCCCcEEEEeecCC---ce---------------EEEEE-eCC--eEEEEEC----CeEEEEEcCCCeEE--EE
Q 022387 157 KVMIWDDHQSRCIGELSFRS---EV---------------RSVKL-RRD--RIIVVLE----QKIFVYNFADLKLL--HQ 209 (298)
Q Consensus 157 ~v~iWD~~~~~~~~~~~~~~---~v---------------~~v~~-~~~--~l~v~~~----~~I~iwd~~~~~~i--~~ 209 (298)
.+.|+|-.+++.+.++.+.. .+ .+++. ..+ .++++-. ..|..||..+.++. .+
T Consensus 230 yL~vfdG~TG~~l~~~~~~p~rg~~~~WGD~ygnR~drf~~~vayLDG~~Ps~v~~rGyYtr~~v~A~d~~~~~L~~~W~ 309 (591)
T 2zux_A 230 YLTVFQGSTGKELVTANFEPARGNVSDWGDSYGNRVDRFLAGIAYLDGQRPSLIMTRGYYAKTMLVAYNFRDGKLSKLWT 309 (591)
T ss_dssp EEEEEETTTCCEEEEEECSSCCCCGGGGTCSSSSGGGCEEEEEECTTSSSCEEEEEECCSSSCEEEEEEEETTEEEEEEE
T ss_pred EEEEEeCCCCCEEecccCCCCCCcccccccccccccccceeeEEECCCCCceEEEeccccceeEEEEEECCCCceEEEEE
Confidence 48999999999988877632 11 23332 222 2222221 36888998777653 34
Q ss_pred EeccC-----------CCcceEEEEeCCCCeEEEEecCCCceEEEEEcCCcceE-eecccccceeEEEECCC--CCEEEE
Q 022387 210 IETIA-----------NPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTK-FIMAHDSRIACFALTQD--GQLLAT 275 (298)
Q Consensus 210 ~~~~~-----------~~~~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~~~~~-~~~~H~~~V~~l~fspd--g~~lAt 275 (298)
+.... +...+..+.-|+...++. |+. +.|-+.+.+. +-.+|...+..-.|.|+ |.-+..
T Consensus 310 ~d~~~~~~~~~~gqg~h~~~vaDVDgDG~dEIv~--Gs~-----~iD~dG~~L~st~~gHGDa~hv~dldP~r~GlEv~~ 382 (591)
T 2zux_A 310 LDSSKSGNEAFAGQGNHNLSIADVDGDGKDEIIF--GSM-----AVDHDGKGMYSTGLGHGDALHTGDLDPGRPGLEVFQ 382 (591)
T ss_dssp EETTSTTCGGGSSCCCSCCEEECCSSSSSCEEEE--TTE-----EECTTSCEEEECSCCCCSCEEEECCCTTSSSCEEEE
T ss_pred ecCCCCCcccccccCCCCCeeEeCCCCCCceEEE--eee-----EECCCCCEeeeCCCCCCCeeEEeecCCCCCCcEEEE
Confidence 44321 112223333333334443 441 2222222222 22389888888889888 556767
Q ss_pred EeCCC----CEEEEEECCCCcEEEec
Q 022387 276 SSTKG----TLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 276 ~S~Dg----t~IrIWd~~tg~~l~~~ 297 (298)
+.+++ . ..+.|..+|+.+.++
T Consensus 383 ~~E~~~~~~G-~~~~dA~tG~vlw~~ 407 (591)
T 2zux_A 383 VHEDKNAKYG-LSFRDAATGKILWGV 407 (591)
T ss_dssp ECCCTTSSCS-EEEEETTTCCEEEEE
T ss_pred EecCCCCCCc-cEEEECCCCcEEEEc
Confidence 66651 3 457899999988664
No 353
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=33.74 E-value=32 Score=24.03 Aligned_cols=17 Identities=24% Similarity=0.352 Sum_probs=15.4
Q ss_pred CEEEEEECCCCcEEEec
Q 022387 281 TLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 281 t~IrIWd~~tg~~l~~~ 297 (298)
..|.|||+.+|.++.+|
T Consensus 18 E~V~IvNvnNG~Rf~TY 34 (96)
T 1vc3_B 18 EQVDIYDITNGARLTTY 34 (96)
T ss_dssp CEEEEEETTTCCEEEEE
T ss_pred CEEEEEECCCCceEEEE
Confidence 35999999999999998
No 354
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=33.23 E-value=2e+02 Score=25.86 Aligned_cols=37 Identities=22% Similarity=0.225 Sum_probs=25.4
Q ss_pred cceeEEEECCCCC-EEEEEeCCCCEEE------EEECCCCcEEEe
Q 022387 259 SRIACFALTQDGQ-LLATSSTKGTLVR------IFNTLDGTLLQE 296 (298)
Q Consensus 259 ~~V~~l~fspdg~-~lAt~S~Dgt~Ir------IWd~~tg~~l~~ 296 (298)
..++.|++.|||. ++++-+..|. |. +|.+..-..+.+
T Consensus 405 ~R~~dv~~gpDG~~Lyv~~d~~G~-i~~~~~~~~~~~~~~~~i~~ 448 (454)
T 1cru_A 405 NRYRDVIASPDGNVLYVLTDTAGN-VQKDDGSVTNTLENPGSLIK 448 (454)
T ss_dssp SCEEEEEECTTSSCEEEEECSSCC-EECTTSCEECCCSSTTCEEE
T ss_pred CCceeEEECCCCCEEEEEECCCCC-CccCCCceeEeccCCCceEE
Confidence 6899999999997 7776655666 33 666655444433
No 355
>3plx_B Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta-barrel; 1.75A {Campylobacter jejuni subsp}
Probab=31.93 E-value=35 Score=24.08 Aligned_cols=17 Identities=18% Similarity=0.266 Sum_probs=15.3
Q ss_pred CEEEEEECCCCcEEEec
Q 022387 281 TLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 281 t~IrIWd~~tg~~l~~~ 297 (298)
..|.|||+.+|.++.+|
T Consensus 18 E~V~I~NvnNG~Rf~TY 34 (102)
T 3plx_B 18 EKVQVVNVNNGARFETY 34 (102)
T ss_dssp CEEEEEETTTCCEEEEE
T ss_pred CEEEEEECCCCcEEEEE
Confidence 35999999999999998
No 356
>3oug_A Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta barrel; HET: MSE; 1.55A {Francisella tularensis subsp} SCOP: b.52.2.0
Probab=28.11 E-value=44 Score=24.03 Aligned_cols=43 Identities=14% Similarity=0.101 Sum_probs=26.7
Q ss_pred cccccceeEEEECCCCCEEE-------EEeCCCCEEEEEECCCCcEEEec
Q 022387 255 MAHDSRIACFALTQDGQLLA-------TSSTKGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 255 ~~H~~~V~~l~fspdg~~lA-------t~S~Dgt~IrIWd~~tg~~l~~~ 297 (298)
+-|...|+.-..+-.|..=. .+=..+..|.|||+.+|..+.+|
T Consensus 12 KIHratVT~a~L~Y~GSitID~~Ll~aA~i~~~E~V~I~NvnNG~Rf~TY 61 (114)
T 3oug_A 12 KISYATVTGKDLFYVGSITIDSEIMKQANIIENEKVQVVNLNNGERLETY 61 (114)
T ss_dssp EEEEEECCEEESSCC-CEEEEHHHHHHTTCCTTBEEEEEETTTCCEEEEE
T ss_pred hhcceEEecccccccceEEECHHHHHHcCCCcCCEEEEEECCCCceEEEE
Confidence 44666666665555444211 11124456999999999999987
No 357
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=27.98 E-value=1.9e+02 Score=24.69 Aligned_cols=53 Identities=17% Similarity=0.265 Sum_probs=30.5
Q ss_pred CeEEEEecCCCceEEEEEcCCcceE----eecccccceeEEEECCCCCEEEEEe-CCCC
Q 022387 228 SLVLVCPGLQKGQVRVEHYASKRTK----FIMAHDSRIACFALTQDGQLLATSS-TKGT 281 (298)
Q Consensus 228 ~~~la~sGs~dg~v~i~~~~~~~~~----~~~~H~~~V~~l~fspdg~~lAt~S-~Dgt 281 (298)
+.++++ ....+.|...+++..... .+......+..|++.|||.++++.. .+|.
T Consensus 289 g~l~v~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td~~~g~ 346 (353)
T 2g8s_A 289 QKLFIG-ALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTDESSGE 346 (353)
T ss_dssp TEEEEE-ETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEECSTTEE
T ss_pred CcEEEE-EccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEeCCCCE
Confidence 455553 445556555444433211 1223335799999999999877653 3444
No 358
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=25.13 E-value=3.2e+02 Score=23.26 Aligned_cols=18 Identities=11% Similarity=0.112 Sum_probs=13.9
Q ss_pred cceeEEEECC-CCCEEEEE
Q 022387 259 SRIACFALTQ-DGQLLATS 276 (298)
Q Consensus 259 ~~V~~l~fsp-dg~~lAt~ 276 (298)
.....|+|+| +|.++++-
T Consensus 197 rnp~gl~~d~~~g~l~~~d 215 (353)
T 2g8s_A 197 RNPQGMAMNPWSNALWLNE 215 (353)
T ss_dssp SEEEEEEEETTTTEEEEEE
T ss_pred cCccceEEECCCCCEEEEe
Confidence 4578899999 78777764
No 359
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=24.99 E-value=3.4e+02 Score=23.50 Aligned_cols=60 Identities=12% Similarity=0.141 Sum_probs=37.8
Q ss_pred ceEEEEeCCCCeEEEEecCCCceEEEEEcCC-cce---EeecccccceeEEEECC-CCCEEEEEeCCC
Q 022387 218 GLCAVSQGVGSLVLVCPGLQKGQVRVEHYAS-KRT---KFIMAHDSRIACFALTQ-DGQLLATSSTKG 280 (298)
Q Consensus 218 ~~~~~s~~~d~~~la~sGs~dg~v~i~~~~~-~~~---~~~~~H~~~V~~l~fsp-dg~~lAt~S~Dg 280 (298)
.-+++++++ ..+.++-+..+.|..+++.. ..+ ..+ ...+..-.+++.+ +|.+.+++..++
T Consensus 224 NGia~spDg--~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~g 288 (355)
T 3sre_A 224 NGINISPDG--KYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPNG 288 (355)
T ss_dssp EEEEECTTS--SEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESCH
T ss_pred CcceECCCC--CEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCCc
Confidence 345565554 44444456678888887753 222 133 2346688999999 599999876553
No 360
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=24.49 E-value=3.9e+02 Score=24.04 Aligned_cols=21 Identities=14% Similarity=-0.031 Sum_probs=17.6
Q ss_pred ceeEEEECCCCCEEEEEeCCC
Q 022387 260 RIACFALTQDGQLLATSSTKG 280 (298)
Q Consensus 260 ~V~~l~fspdg~~lAt~S~Dg 280 (298)
....|+|.|||+++++.++.+
T Consensus 140 ~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 140 LGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp CEEEEEECTTSCEEEEECCTT
T ss_pred cCCcEeECCCCcEEEEeCCCC
Confidence 368999999999999988654
No 361
>3jt0_A Lamin-B1; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, HR5546A, LMNB1_human; 2.39A {Homo sapiens}
Probab=23.68 E-value=2.3e+02 Score=21.18 Aligned_cols=72 Identities=15% Similarity=0.158 Sum_probs=34.1
Q ss_pred cccCCCCCCeEEEEEcCCCCEEEEEcCCeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeE
Q 022387 79 STSSSPPPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKV 158 (298)
Q Consensus 79 ~~~~~~~~~V~~v~fs~dg~~lasgs~~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v 158 (298)
+......+.|.-...+++|+|+..=-... + +.+-.++.+.+.. ++ ... .+.|.....+-.+ ++|
T Consensus 19 s~~~SakG~V~I~Evd~~GkfV~L~N~s~-~--~~~LgGW~L~r~v--~g-~~~-~y~FP~~~~L~pg---------~~V 82 (144)
T 3jt0_A 19 SHSASATGNVCIEEIDVDGKFIRLKNTSE-Q--DQPMGGWEMIRKI--GD-TSV-SYKYTSRYVLKAG---------QTV 82 (144)
T ss_dssp ------CCCEEEEEECTTSSEEEEEECSS-S--CEECTTCEEEEEE--TT-EEE-EEECCTTCEECTT---------CEE
T ss_pred EEecccCCCEEEEEECCCCCEEEEEECCC-C--ceecCCcEEEEEe--CC-Cce-EEEcCCCcEECCC---------CEE
Confidence 33445556787777888888764321100 0 0122334444443 22 222 3666655443322 779
Q ss_pred EEEeCCCC
Q 022387 159 MIWDDHQS 166 (298)
Q Consensus 159 ~iWD~~~~ 166 (298)
+||-...+
T Consensus 83 tVwa~g~g 90 (144)
T 3jt0_A 83 TIWAANAG 90 (144)
T ss_dssp EEEETTSC
T ss_pred EEEECCCC
Confidence 99975543
No 362
>2lll_A Lamin-B2; immunoglobulin-like fold, structural protein, NESG, northeas structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=23.56 E-value=2.3e+02 Score=21.07 Aligned_cols=71 Identities=10% Similarity=0.108 Sum_probs=34.9
Q ss_pred ccCCCCCCeEEEEEcCCCCEEEEEcCCeEEEEEcCCCceEEEEeeecCCceEEEEEecCCCEEEEEeCCCCCCCCCCeEE
Q 022387 80 TSSSPPPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (298)
Q Consensus 80 ~~~~~~~~V~~v~fs~dg~~lasgs~~gi~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~ 159 (298)
.....++.|.-...+++|+|+..=-... + +.+-.++.+.+.. ++. ....+.|.....+-.+ ++|+
T Consensus 16 ~~~SakG~V~I~E~d~~GefV~L~N~s~-~--~~~L~GW~L~r~v--~g~-~~~~y~Fp~~~~L~pg---------~~Vt 80 (139)
T 2lll_A 16 FQGSASGSVSIEEIDLEGKFVQLKNNSD-K--DQSLGNWRIKRQV--LEG-EEIAYKFTPKYILRAG---------QMVT 80 (139)
T ss_dssp ---CCTTSEEEEEECSSCSEEEEEECSS-S--CEECSSCEEEEEE--TTS-CEEEEECCTTCEECTT---------CEEE
T ss_pred EeecCCCCEEEEEECCCCCEEEEEECCC-C--ccccCCCEEEEec--CCC-ccEEEEECCCcEECCC---------CEEE
Confidence 3445556787788888888764321110 0 0122334444443 222 2344556554443322 6799
Q ss_pred EEeCCC
Q 022387 160 IWDDHQ 165 (298)
Q Consensus 160 iWD~~~ 165 (298)
||-...
T Consensus 81 Iws~~~ 86 (139)
T 2lll_A 81 VWAAGA 86 (139)
T ss_dssp EEEGGG
T ss_pred EEeCCC
Confidence 997544
No 363
>1pqh_A Aspartate 1-decarboxylase; pyruvoyl dependent decarboxylase, protein SELF-processing; 1.29A {Escherichia coli} SCOP: b.52.2.1 PDB: 1pqf_A 1pt1_A 1pt0_A 1pyq_A 1ppy_A 1pqe_A 1pyu_B 3tm7_B 1aw8_B 1pyu_A 3tm7_A 1aw8_A
Probab=23.56 E-value=57 Score=24.43 Aligned_cols=19 Identities=16% Similarity=0.317 Sum_probs=16.3
Q ss_pred CCCEEEEEECCCCcEEEec
Q 022387 279 KGTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 279 Dgt~IrIWd~~tg~~l~~~ 297 (298)
.+..|.|||+.+|..+.+|
T Consensus 57 ~~EkV~IvNvnNG~RfeTY 75 (143)
T 1pqh_A 57 ENEAIDIWNVTNGKRFSTY 75 (143)
T ss_dssp TTCEEEEEETTTCCEEEEE
T ss_pred CCCEEEEEECCCCceEEEE
Confidence 4456999999999999987
No 364
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=23.14 E-value=3.2e+02 Score=22.52 Aligned_cols=122 Identities=11% Similarity=0.020 Sum_probs=0.0
Q ss_pred CCeEEEEeCCC-CcEEEEeecCCceEEEEEeCCeEEEEECCeEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCCeEEEE
Q 022387 155 LNKVMIWDDHQ-SRCIGELSFRSEVRSVKLRRDRIIVVLEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVC 233 (298)
Q Consensus 155 d~~v~iWD~~~-~~~~~~~~~~~~v~~v~~~~~~l~v~~~~~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~~~la~ 233 (298)
|++|..|-... ++.-........|..++....+.++..++.|..|-....-.+-.=..-...+..++.... ..++.
T Consensus 41 ~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~hs~~l~~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~---hs~al 117 (282)
T 3qhy_B 41 GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHSLALKDGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAW---ASYAL 117 (282)
T ss_dssp TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSEEEEEETTEEEEEECCTTSTTCCCGGGSSSEEEEEEETT---EEEEE
T ss_pred CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCEEEEEECCEEEEeeCCCCCCCCCCcccCCCeEEEECcCC---EEEEE
Q ss_pred ecCCCceEEEEEcCCcceE-eecccccceeEEEECCCCCEEEEEeCCCCEEEEE
Q 022387 234 PGLQKGQVRVEHYASKRTK-FIMAHDSRIACFALTQDGQLLATSSTKGTLVRIF 286 (298)
Q Consensus 234 sGs~dg~v~i~~~~~~~~~-~~~~H~~~V~~l~fspdg~~lAt~S~Dgt~IrIW 286 (298)
. +|.|..|-....-.. ........|..|+.-.+...+.+ ||. |..|
T Consensus 118 --~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~~l~---~G~-v~~w 164 (282)
T 3qhy_B 118 --K-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALAVK---NGG-VIAW 164 (282)
T ss_dssp --E-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEEEE---TTE-EEEE
T ss_pred --e-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEEEEEE---CCE-EEEe
No 365
>3c12_A FLGD, flagellar protein; HOOK capping, IG-like domain, FN-III domain, tudor-like domain, flagellar biogenesis, flagellum; 2.51A {Xanthomonas campestris PV}
Probab=22.67 E-value=1.6e+02 Score=21.56 Aligned_cols=73 Identities=14% Similarity=0.204 Sum_probs=37.5
Q ss_pred eEEEEEcCCCeEEEEEeccCCCcceEEEEeCCCC---eEEEEecCCCce--EEE--EEcCCcceEeecccccceeEEEEC
Q 022387 195 KIFVYNFADLKLLHQIETIANPKGLCAVSQGVGS---LVLVCPGLQKGQ--VRV--EHYASKRTKFIMAHDSRIACFALT 267 (298)
Q Consensus 195 ~I~iwd~~~~~~i~~~~~~~~~~~~~~~s~~~d~---~~la~sGs~dg~--v~i--~~~~~~~~~~~~~H~~~V~~l~fs 267 (298)
.|.|+|- +++.++++.......+...|.+++.. ..+ .+|. +++ -+...+....-....+.|..+.+.
T Consensus 42 ~v~I~d~-~G~~V~t~~~~~~~aG~~~~~WDg~d~~G~~~-----~~G~Y~~~v~a~d~~g~~~~~~~~~~~~V~~V~~~ 115 (138)
T 3c12_A 42 NFEITDA-NGTFVKQLSVPASAAGEVSFAWDGTDANGNRM-----AAGKYGITATQTDTAGAKSKLATYVDAPVDSVTIG 115 (138)
T ss_dssp EEEEECS-SCCEEEEEEEEESSSEEEEEEECSBCTTSCBC-----CSEEEEEEEEEEETTCCEEEECEEEEEEEEEEEEE
T ss_pred EEEEEeC-CCCEEEEEEcCCcCCceEEEEECCcCCCCCCC-----CCceEEEEEEEEECCCCEEEEeeeEEEEEEEEEec
Confidence 3566664 56777777644445566777777521 111 1232 222 223333332222244669999987
Q ss_pred CCCCEE
Q 022387 268 QDGQLL 273 (298)
Q Consensus 268 pdg~~l 273 (298)
..+.+|
T Consensus 116 ~g~~~L 121 (138)
T 3c12_A 116 SDGLYL 121 (138)
T ss_dssp TTEEEE
T ss_pred CCeEEE
Confidence 544444
No 366
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=21.27 E-value=59 Score=31.47 Aligned_cols=34 Identities=9% Similarity=0.051 Sum_probs=24.6
Q ss_pred eeEEE-ECCCCCEEEEE----eCCCCEEEEEECCCCcEE
Q 022387 261 IACFA-LTQDGQLLATS----STKGTLVRIFNTLDGTLL 294 (298)
Q Consensus 261 V~~l~-fspdg~~lAt~----S~Dgt~IrIWd~~tg~~l 294 (298)
...+. ++|||+++|-+ |.|-..||++|+.+++.+
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~ 169 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFV 169 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEEC
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcC
Confidence 34444 88999877765 334455999999999865
No 367
>2c45_A Aspartate 1-decarboxylase precursor; double-PSI beta barrel, lyase, zymogen, pantothenate biosynthesis, pyruvate; 2.99A {Mycobacterium tuberculosis}
Probab=21.05 E-value=55 Score=24.41 Aligned_cols=18 Identities=28% Similarity=0.287 Sum_probs=15.5
Q ss_pred CCEEEEEECCCCcEEEec
Q 022387 280 GTLVRIFNTLDGTLLQEG 297 (298)
Q Consensus 280 gt~IrIWd~~tg~~l~~~ 297 (298)
+..|.|||+.+|..+.+|
T Consensus 41 ~EkV~IvNvnNG~RfeTY 58 (139)
T 2c45_A 41 GEQVTIVDIDNGARLVTY 58 (139)
T ss_dssp SCCEEEEETTTCCEEEEC
T ss_pred CCEEEEEECCCCceEEEE
Confidence 335999999999999988
No 368
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=20.74 E-value=3.4e+02 Score=25.53 Aligned_cols=36 Identities=11% Similarity=0.208 Sum_probs=23.4
Q ss_pred EEEEEcCCcceE-eecccc-cceeEEEECCCCCEEEEE
Q 022387 241 VRVEHYASKRTK-FIMAHD-SRIACFALTQDGQLLATS 276 (298)
Q Consensus 241 v~i~~~~~~~~~-~~~~H~-~~V~~l~fspdg~~lAt~ 276 (298)
+.+.+...+.+. .+.++. ..++.++|+||++.|...
T Consensus 511 ~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 511 MLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred EEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 344444455555 344544 569999999999877655
Done!