BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022394
(298 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224100707|ref|XP_002334345.1| predicted protein [Populus trichocarpa]
gi|222871289|gb|EEF08420.1| predicted protein [Populus trichocarpa]
Length = 289
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/303 (65%), Positives = 234/303 (77%), Gaps = 27/303 (8%)
Query: 3 STPS---PFPQNYTFARPQAGSISRRKPPPTRQPLPSSPSSRCCGHALSLNYPFSPREIP 59
+TPS PF QN++F P +IS P+ P S AL +N F P
Sbjct: 6 TTPSHLTPFTQNHSFNSPPRTTISFWH-------RPTYPPS----FALPINCHFVA---P 51
Query: 60 TCGR-----KLTCKAAEVSVTEEESSASGGGGGGENWVPVVPLSALPKGERRVIIQDGET 114
+C ++ CKA EVS+TEE S+ GGENWVPVVPL+ALPKGERRVIIQDGET
Sbjct: 52 SCKTLRSNCRIVCKATEVSLTEESPSS-----GGENWVPVVPLTALPKGERRVIIQDGET 106
Query: 115 ILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTGAVRDWYPN 174
ILLLWYKD+V+AIENRSPAEGAY+EGL+NAKLTQDGCIVCP+T+STFDLRTGA+++WYPN
Sbjct: 107 ILLLWYKDQVYAIENRSPAEGAYTEGLLNAKLTQDGCIVCPSTDSTFDLRTGAIKEWYPN 166
Query: 175 NPVLRALTPALSTLYIFPVKTDEKNIYIRMEGGASSDASAEIVFSGKAQPGVTATDVNIE 234
NPVLR LTPAL TL+++PVKTDE+NIYI + GG SD SAEIVFSGKAQPGVTA+DVN++
Sbjct: 167 NPVLRVLTPALRTLFVYPVKTDEENIYISIRGGVKSDVSAEIVFSGKAQPGVTASDVNVD 226
Query: 235 EVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFLDFIYSVAG 294
EVRMV+DE EGFGF +ELING+AA IGFL L+DFELLTGKG+LKGTGFLDF+Y+ +
Sbjct: 227 EVRMVIDEGQEGFGFTSKNELINGQAAIIGFLFLIDFELLTGKGVLKGTGFLDFLYAASN 286
Query: 295 ALN 297
N
Sbjct: 287 GFN 289
>gi|359495241|ref|XP_003634942.1| PREDICTED: uncharacterized protein LOC100248314 isoform 2 [Vitis
vinifera]
gi|297741042|emb|CBI31354.3| unnamed protein product [Vitis vinifera]
Length = 280
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/284 (69%), Positives = 227/284 (79%), Gaps = 24/284 (8%)
Query: 34 LPSSPSSRCCGHALSLNYPFSPRE--------------------IPTCGRKLTCKAAEVS 73
+ ++ +++ H LSL+ P R+ + R++TCKA EVS
Sbjct: 1 MATAAATKLTPHLLSLSSPLRRRKPLLHHLPPPLPRNDRSSALTLGLSSRRITCKATEVS 60
Query: 74 VTEEESSASGGGGGGENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPA 133
V EE S+A GG NWVPVVPLSALPKGERRVIIQDGETILLLWYKD+V+AIENRSPA
Sbjct: 61 VAEESSAAGDGG----NWVPVVPLSALPKGERRVIIQDGETILLLWYKDQVYAIENRSPA 116
Query: 134 EGAYSEGLINAKLTQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPV 193
EGAYSEGL+NAKLTQDGCIVCPTT+STFDL+TG ++DWYP NPVLR LTPAL TL+I+PV
Sbjct: 117 EGAYSEGLLNAKLTQDGCIVCPTTDSTFDLQTGEIKDWYPKNPVLRVLTPALRTLFIYPV 176
Query: 194 KTDEKNIYIRMEGGASSDASAEIVFSGKAQPGVTATDVNIEEVRMVVDEDLEGFGFNVTS 253
KTD+KNIYIRM GG SSDASAEIVFSGKAQPG+TATDVN+EEVRM+VDED EGFGF +
Sbjct: 177 KTDDKNIYIRMSGGVSSDASAEIVFSGKAQPGLTATDVNVEEVRMIVDEDQEGFGFTGKN 236
Query: 254 ELINGKAAAIGFLLLLDFELLTGKGLLKGTGFLDFIYSVAGALN 297
ELINGKAA +GFLLLLDFELLTGKG+LKGTGFLDF+Y+V+ A
Sbjct: 237 ELINGKAAVVGFLLLLDFELLTGKGILKGTGFLDFLYAVSNAFK 280
>gi|255574251|ref|XP_002528040.1| oxidoreductase, putative [Ricinus communis]
gi|223532570|gb|EEF34358.1| oxidoreductase, putative [Ricinus communis]
Length = 280
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/292 (67%), Positives = 229/292 (78%), Gaps = 23/292 (7%)
Query: 6 SPFPQNYTFARPQAGSISRRKPPPTRQPLPSSPSSRCCGHALSLNYPFSPREIPTCGRKL 65
S FP+NY+F P+ IS R QP S +++C +L P K+
Sbjct: 12 SSFPRNYSFNPPRIVPISLR-----YQPFHHS-ATKCQFVSLKARSP-----------KI 54
Query: 66 TCKAAEVSVTEEESSASGGGGGGENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVF 125
+CKAAEVSV+E+ S+ GENWVPVVPL+ALP+GERRVIIQDGETILLLWYKD+VF
Sbjct: 55 SCKAAEVSVSEQSPSS------GENWVPVVPLAALPRGERRVIIQDGETILLLWYKDQVF 108
Query: 126 AIENRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPAL 185
AIENRSPAEGAYSEGL+NAKLTQDGCIVCPTT+STFDLR GA++DWYP NPVLRALTP L
Sbjct: 109 AIENRSPAEGAYSEGLLNAKLTQDGCIVCPTTDSTFDLRNGAIKDWYPKNPVLRALTPPL 168
Query: 186 STLYIFPVKTDEKNIYIRMEGGASSDASAEIVFSGKAQPGVTATDVNIEEVRMVVDEDLE 245
LY++P+KTDE+NIYI M GG SDASAEIVFSGKAQPG+TA+DVN++EVRMVVDE+ E
Sbjct: 169 RALYVYPIKTDEENIYISMRGGVKSDASAEIVFSGKAQPGMTASDVNVDEVRMVVDENQE 228
Query: 246 GFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFLDFIYSVAGALN 297
GFGF +ELINGKAA IGFLLLLDFELLTGKGLLKG GFLDF+Y + A
Sbjct: 229 GFGFTGKNELINGKAAVIGFLLLLDFELLTGKGLLKGIGFLDFLYGITNAFQ 280
>gi|356497393|ref|XP_003517545.1| PREDICTED: uncharacterized protein LOC100791021 [Glycine max]
Length = 270
Score = 364 bits (934), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 194/265 (73%), Positives = 220/265 (83%), Gaps = 16/265 (6%)
Query: 34 LPSSPSSR-CCGHALSLNYPFSPREIPTCGRKLTCKAAEVSVTEEESSASGGGGGGENWV 92
LPS P C H+L L Y +PR LTCKAA+VSV EE S++ G+NWV
Sbjct: 21 LPSPPKPLFLCRHSL-LRYRSTPR--------LTCKAAQVSVAEESSAS------GDNWV 65
Query: 93 PVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCI 152
PVVPLSALPKGERRVIIQDGETILLLWYKD+VFAIENRSPAEGAY+EGL+NAKLTQDGCI
Sbjct: 66 PVVPLSALPKGERRVIIQDGETILLLWYKDQVFAIENRSPAEGAYTEGLLNAKLTQDGCI 125
Query: 153 VCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEGGASSDA 212
VCP+T+STFDLRTG +++WYP NPVLR LTPAL L+I+PVKTDE+NIYI + GG SDA
Sbjct: 126 VCPSTDSTFDLRTGDIKEWYPKNPVLRVLTPALRKLFIYPVKTDEQNIYISIRGGVRSDA 185
Query: 213 SAEIVFSGKAQPGVTATDVNIEEVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFE 272
SAEIVFSGKAQPG TATDVN++EV+M+VDED EGFGF +E+ING+AA IGFLLLLDFE
Sbjct: 186 SAEIVFSGKAQPGFTATDVNVDEVKMIVDEDQEGFGFTGKNEIINGRAAVIGFLLLLDFE 245
Query: 273 LLTGKGLLKGTGFLDFIYSVAGALN 297
LLTGKGLLKGTGFLDF+YSV A N
Sbjct: 246 LLTGKGLLKGTGFLDFLYSVTNAFN 270
>gi|115484891|ref|NP_001067589.1| Os11g0242400 [Oryza sativa Japonica Group]
gi|62733863|gb|AAX95972.1| Rieske [2Fe-2S] domain, putative [Oryza sativa Japonica Group]
gi|62733864|gb|AAX95973.1| Rieske [2Fe-2S] domain, putative [Oryza sativa Japonica Group]
gi|62733865|gb|AAX95974.1| Rieske [2Fe-2S] domain, putative [Oryza sativa Japonica Group]
gi|77549535|gb|ABA92332.1| Rieske domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|77549536|gb|ABA92333.1| Rieske domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|77549537|gb|ABA92334.1| Rieske domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113644811|dbj|BAF27952.1| Os11g0242400 [Oryza sativa Japonica Group]
gi|125533933|gb|EAY80481.1| hypothetical protein OsI_35659 [Oryza sativa Indica Group]
gi|125576731|gb|EAZ17953.1| hypothetical protein OsJ_33497 [Oryza sativa Japonica Group]
gi|215695042|dbj|BAG90233.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 277
Score = 359 bits (922), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 170/235 (72%), Positives = 204/235 (86%), Gaps = 1/235 (0%)
Query: 63 RKLTCKAAEVSVTEEESSASGGGGGGENWVPVVPLSALPKGERRVIIQDGETILLLWYKD 122
R + C+AAEVS E S+A+G G NWVPVVPL+ALP+GERRVI+QDGE ILLLWYK+
Sbjct: 43 RVVGCRAAEVS-GAEPSAAAGEASGDGNWVPVVPLAALPRGERRVIVQDGEEILLLWYKE 101
Query: 123 EVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALT 182
+V+A+ENRSPAEGAY+EGL+NAKLTQDGCIVCPTT+STFDLRTG +++WYPNNPVLRALT
Sbjct: 102 QVYAVENRSPAEGAYTEGLLNAKLTQDGCIVCPTTDSTFDLRTGEIKEWYPNNPVLRALT 161
Query: 183 PALSTLYIFPVKTDEKNIYIRMEGGASSDASAEIVFSGKAQPGVTATDVNIEEVRMVVDE 242
PAL L+++PVK D +NIYI ++G +S SAEI+FSGKAQPG TA+DVNIEEVRMV+DE
Sbjct: 162 PALRKLFVYPVKIDGENIYISIKGAVTSGGSAEIIFSGKAQPGFTASDVNIEEVRMVIDE 221
Query: 243 DLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFLDFIYSVAGALN 297
D+ GFGF +ELINGKAA IGFLLL+DFELLTGKGLLKGTG LDFIY+++ A +
Sbjct: 222 DVGGFGFTNKNELINGKAAIIGFLLLIDFELLTGKGLLKGTGLLDFIYAISRAFS 276
>gi|449447593|ref|XP_004141552.1| PREDICTED: uncharacterized protein LOC101206141 [Cucumis sativus]
gi|449506832|ref|XP_004162861.1| PREDICTED: uncharacterized protein LOC101230421 [Cucumis sativus]
Length = 277
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 192/263 (73%), Positives = 215/263 (81%), Gaps = 11/263 (4%)
Query: 38 PSSRCCGHALSLNYPFSPREIPT----CGRKLTCKAAEVSVTEEESSASGGGGGGENWVP 93
P S C AL L P R + RK++CKA+E+SV EE SSASG NWVP
Sbjct: 21 PISAPCTAALPLLKPALHRSLFASPLPLARKISCKASEISVAEE-SSASG------NWVP 73
Query: 94 VVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIV 153
VVPLSALP+GERRVIIQ GETILLLWYKD +FAIENRSPAEGAY+EGL+NAKLT+DGCIV
Sbjct: 74 VVPLSALPRGERRVIIQGGETILLLWYKDRIFAIENRSPAEGAYTEGLLNAKLTKDGCIV 133
Query: 154 CPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEGGASSDAS 213
CPTT+STFDL+TG +++WYP NPVLR LTPAL L+I+ VKTDE NIYI M G SD+S
Sbjct: 134 CPTTDSTFDLQTGEIKEWYPKNPVLRVLTPALRKLFIYAVKTDENNIYINMRGNVISDSS 193
Query: 214 AEIVFSGKAQPGVTATDVNIEEVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFEL 273
AEIVFSGKAQPGVTATDVN++EVRMVVDEDLEGFGF +E+INGKAA IGFLLLLDFEL
Sbjct: 194 AEIVFSGKAQPGVTATDVNVDEVRMVVDEDLEGFGFTGKNEVINGKAAVIGFLLLLDFEL 253
Query: 274 LTGKGLLKGTGFLDFIYSVAGAL 296
LTGKGLLKGTGFLDFIYSV+ A
Sbjct: 254 LTGKGLLKGTGFLDFIYSVSDAF 276
>gi|326489352|dbj|BAK01659.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326500040|dbj|BAJ90855.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 276
Score = 354 bits (909), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 172/246 (69%), Positives = 203/246 (82%), Gaps = 4/246 (1%)
Query: 52 PFSPREIPTCGRKLTCKAAEVSVTEEESSASGGGGGGENWVPVVPLSALPKGERRVIIQD 111
PF R C +LTC+A +VS E SA G G +WVPVVPL+ALP+GERRVI+QD
Sbjct: 34 PFHARN--RCHPRLTCRATDVS--GAEPSAPPETGRGSSWVPVVPLAALPRGERRVIVQD 89
Query: 112 GETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTGAVRDW 171
GE ILLLWYKD+VFAIENRSPAEGAY+EGL+NAKLTQDGCIVCP+T+STFDLRTG +++W
Sbjct: 90 GEEILLLWYKDDVFAIENRSPAEGAYTEGLLNAKLTQDGCIVCPSTDSTFDLRTGEIKEW 149
Query: 172 YPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEGGASSDASAEIVFSGKAQPGVTATDV 231
YP NPVLRALTP L L+++P KTD +NIYI + G +SS SAEI+FSGKAQPG TA+DV
Sbjct: 150 YPKNPVLRALTPVLRNLFVYPAKTDGENIYISIRGASSSGGSAEILFSGKAQPGSTASDV 209
Query: 232 NIEEVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFLDFIYS 291
NIEEVRMVVDE + GFGF +EL+NGKAA IGFLLL+DFELLTGKGLLKGTG LDFIY+
Sbjct: 210 NIEEVRMVVDEGVGGFGFTAYNELVNGKAAIIGFLLLIDFELLTGKGLLKGTGLLDFIYA 269
Query: 292 VAGALN 297
++ A +
Sbjct: 270 ISRAFS 275
>gi|147817180|emb|CAN77678.1| hypothetical protein VITISV_018103 [Vitis vinifera]
Length = 326
Score = 353 bits (905), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 180/224 (80%), Positives = 200/224 (89%), Gaps = 4/224 (1%)
Query: 63 RKLTCKAAEVSVTEEESSASGGGGGGENWVPVVPLSALPKGERRVIIQDGETILLLWYKD 122
R++TCKA EVSV EE S+A GG NWVPVVPLSALPKGERRVIIQDGETILLLWYKD
Sbjct: 50 RRITCKATEVSVAEESSAAGDGG----NWVPVVPLSALPKGERRVIIQDGETILLLWYKD 105
Query: 123 EVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALT 182
+V+AIENRSPAEGAYSEGL+NAKLTQDGCIVCPTT+STFDL+TG ++DWYP NPVLR L
Sbjct: 106 QVYAIENRSPAEGAYSEGLLNAKLTQDGCIVCPTTDSTFDLQTGXIKDWYPKNPVLRVLX 165
Query: 183 PALSTLYIFPVKTDEKNIYIRMEGGASSDASAEIVFSGKAQPGVTATDVNIEEVRMVVDE 242
PAL TL+I+PVKTD+KNIYIRM GG SSDASAEIVFSGKAQPG+TATDVN+EEVRM+VDE
Sbjct: 166 PALRTLFIYPVKTDDKNIYIRMSGGVSSDASAEIVFSGKAQPGLTATDVNVEEVRMIVDE 225
Query: 243 DLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
D EGFGF +ELINGKAA +GFLLLLDFELLTGKG+L+G L
Sbjct: 226 DQEGFGFTGKNELINGKAAVVGFLLLLDFELLTGKGILQGNRLL 269
>gi|357481313|ref|XP_003610942.1| hypothetical protein MTR_5g008750 [Medicago truncatula]
gi|355512277|gb|AES93900.1| hypothetical protein MTR_5g008750 [Medicago truncatula]
Length = 272
Score = 350 bits (899), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 178/232 (76%), Positives = 203/232 (87%), Gaps = 9/232 (3%)
Query: 66 TCKAAEVSVTEEESSASGGGGGGENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVF 125
TCKA++VSV EE S +NWVPVVP+SALP+GERRVIIQ+GETILLLWYKD++F
Sbjct: 50 TCKASQVSVAEESS---------KNWVPVVPVSALPRGERRVIIQEGETILLLWYKDQIF 100
Query: 126 AIENRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPAL 185
AIENRSPAEGAYSEGL NAKLTQDGCIVCPTT+STFDLRTG +++WYPNNPVLR LTPAL
Sbjct: 101 AIENRSPAEGAYSEGLKNAKLTQDGCIVCPTTDSTFDLRTGEIKEWYPNNPVLRVLTPAL 160
Query: 186 STLYIFPVKTDEKNIYIRMEGGASSDASAEIVFSGKAQPGVTATDVNIEEVRMVVDEDLE 245
L+++PVKTDE+NIYI + GG SDA+ EI+FSGKAQPG+TATDVN++EVRMVVDE
Sbjct: 161 RNLFVYPVKTDEQNIYISITGGFKSDAATEILFSGKAQPGITATDVNVDEVRMVVDESQL 220
Query: 246 GFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFLDFIYSVAGALN 297
GFGFN +E+INGKAA IGFLLLLDFELLTGKGLLKGTGFLDFIYS + ALN
Sbjct: 221 GFGFNRKNEIINGKAAVIGFLLLLDFELLTGKGLLKGTGFLDFIYSASNALN 272
>gi|226495849|ref|NP_001151666.1| rieske domain containing protein [Zea mays]
gi|195648532|gb|ACG43734.1| rieske domain containing protein [Zea mays]
Length = 276
Score = 348 bits (894), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 179/246 (72%), Positives = 207/246 (84%), Gaps = 3/246 (1%)
Query: 54 SPREIPTCGRKLTCKAAEVSVTEEESSASGGGGGGEN--WVPVVPLSALPKGERRVIIQD 111
+PR +L C+AAEVS E S+A+ G GGG WVPVVPL+ALP+GERRVI+QD
Sbjct: 32 APRHCRNSSSRLACRAAEVSGAESSSAAAEGAGGGGGASWVPVVPLAALPRGERRVIVQD 91
Query: 112 GETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTGAVRDW 171
GE ILLLWYK++VFAIENRSPAEGAY+EGL+NAKLTQDGCIVCP+T+STFDLRTG +++W
Sbjct: 92 GEEILLLWYKNQVFAIENRSPAEGAYTEGLLNAKLTQDGCIVCPSTDSTFDLRTGEIKEW 151
Query: 172 YPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEGGASSDASAEIVFSGKAQPGVTATDV 231
YP NPVLRALTPAL L+ + VKTDE+NIYI GA SAEI+FSGKAQPGVTA+DV
Sbjct: 152 YPKNPVLRALTPALRKLFTYRVKTDEENIYISFS-GADGAGSAEIIFSGKAQPGVTASDV 210
Query: 232 NIEEVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFLDFIYS 291
N+EEVRMVVDED+ GFGF +ELINGKAA IGFLLL+DFELLTGKGLLKGTGFLDFIY+
Sbjct: 211 NVEEVRMVVDEDVGGFGFTSDNELINGKAAIIGFLLLIDFELLTGKGLLKGTGFLDFIYA 270
Query: 292 VAGALN 297
V+GA N
Sbjct: 271 VSGAFN 276
>gi|414878920|tpg|DAA56051.1| TPA: hypothetical protein ZEAMMB73_342569 [Zea mays]
Length = 370
Score = 348 bits (893), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 179/246 (72%), Positives = 207/246 (84%), Gaps = 3/246 (1%)
Query: 54 SPREIPTCGRKLTCKAAEVSVTEEESSASGGGGGGEN--WVPVVPLSALPKGERRVIIQD 111
+PR +L C+AAEVS E S+A+ G GGG WVPVVPL+ALP+GERRVI+QD
Sbjct: 126 APRHCRNSSSRLACRAAEVSGAESSSAAAEGAGGGGGASWVPVVPLAALPRGERRVIVQD 185
Query: 112 GETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTGAVRDW 171
GE ILLLWYK++VFAIENRSPAEGAY+EGL+NAKLTQDGCIVCP+T+STFDLRTG +++W
Sbjct: 186 GEEILLLWYKNQVFAIENRSPAEGAYTEGLLNAKLTQDGCIVCPSTDSTFDLRTGEIKEW 245
Query: 172 YPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEGGASSDASAEIVFSGKAQPGVTATDV 231
YP NPVLRALTPAL L+ + VKTDE+NIYI GA SAEI+FSGKAQPGVTA+DV
Sbjct: 246 YPKNPVLRALTPALRKLFTYRVKTDEENIYISF-SGADGAGSAEIIFSGKAQPGVTASDV 304
Query: 232 NIEEVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFLDFIYS 291
N+EEVRMVVDED+ GFGF +ELINGKAA IGFLLL+DFELLTGKGLLKGTGFLDFIY+
Sbjct: 305 NVEEVRMVVDEDVGGFGFTSDNELINGKAAIIGFLLLIDFELLTGKGLLKGTGFLDFIYA 364
Query: 292 VAGALN 297
V+GA N
Sbjct: 365 VSGAFN 370
>gi|194696446|gb|ACF82307.1| unknown [Zea mays]
Length = 276
Score = 347 bits (890), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 178/246 (72%), Positives = 206/246 (83%), Gaps = 3/246 (1%)
Query: 54 SPREIPTCGRKLTCKAAEVSVTEEESSASGGGGGGEN--WVPVVPLSALPKGERRVIIQD 111
+PR +L C+AAEVS E S+A+ G GGG WVPVVPL+ALP+GERRVI+QD
Sbjct: 32 APRHCRNSSSRLACRAAEVSGAESSSAAAEGAGGGGGASWVPVVPLAALPRGERRVIVQD 91
Query: 112 GETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTGAVRDW 171
GE ILLLWYK++VFAIENRSPAEGAY+EGL+NAKLTQDGCIVCP+T+STFDLRTG +++W
Sbjct: 92 GEEILLLWYKNQVFAIENRSPAEGAYTEGLLNAKLTQDGCIVCPSTDSTFDLRTGEIKEW 151
Query: 172 YPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEGGASSDASAEIVFSGKAQPGVTATDV 231
YP NPVLRALTPAL L+ + VKTDE+NIYI GA SAEI+FSGK QPGVTA+DV
Sbjct: 152 YPKNPVLRALTPALRKLFTYRVKTDEENIYISFS-GADGAGSAEIIFSGKVQPGVTASDV 210
Query: 232 NIEEVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFLDFIYS 291
N+EEVRMVVDED+ GFGF +ELINGKAA IGFLLL+DFELLTGKGLLKGTGFLDFIY+
Sbjct: 211 NVEEVRMVVDEDVGGFGFTSDNELINGKAAIIGFLLLIDFELLTGKGLLKGTGFLDFIYA 270
Query: 292 VAGALN 297
V+GA N
Sbjct: 271 VSGAFN 276
>gi|357157039|ref|XP_003577663.1| PREDICTED: uncharacterized protein LOC100824335 [Brachypodium
distachyon]
Length = 276
Score = 343 bits (879), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 178/270 (65%), Positives = 212/270 (78%), Gaps = 9/270 (3%)
Query: 36 SSPSSRCCGHALSL------NYPFSPREIPTCGRKLTCKAAEVSVTEEESS--ASGGGGG 87
++ SS C H + + PF R R L C+A +VS E ++ +G GGG
Sbjct: 7 TTASSSCFLHCRVVSSSPRGHLPFHARTRCHSSR-LACRATDVSGAEPSAAPPETGNGGG 65
Query: 88 GENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLT 147
G +WVPVVPL+ALP+GERRVI+QDGE ILLLWYKDEVFAIENRSPAEGAY+EGL+NAKLT
Sbjct: 66 GRSWVPVVPLAALPRGERRVIVQDGEEILLLWYKDEVFAIENRSPAEGAYTEGLLNAKLT 125
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEGG 207
QDGCIVCP+T+STFDLRTG +++WYPNNPVLRALTP L L+++ K DE+NIYI + G
Sbjct: 126 QDGCIVCPSTDSTFDLRTGEIKEWYPNNPVLRALTPVLRKLFVYRAKIDEENIYISISGA 185
Query: 208 ASSDASAEIVFSGKAQPGVTATDVNIEEVRMVVDEDLEGFGFNVTSELINGKAAAIGFLL 267
SS SAEI+FSGKAQPG+TA+DVNIEEVRMVVDE + GFGF +E INGKAA IGFLL
Sbjct: 186 GSSGGSAEILFSGKAQPGITASDVNIEEVRMVVDEGVGGFGFTPDNEQINGKAAIIGFLL 245
Query: 268 LLDFELLTGKGLLKGTGFLDFIYSVAGALN 297
L+DFELLTGKGLLKGTG LDFIY+V+ A +
Sbjct: 246 LIDFELLTGKGLLKGTGLLDFIYAVSRAFS 275
>gi|359495243|ref|XP_002276968.2| PREDICTED: uncharacterized protein LOC100248314 isoform 1 [Vitis
vinifera]
Length = 264
Score = 335 bits (860), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 182/284 (64%), Positives = 211/284 (74%), Gaps = 40/284 (14%)
Query: 34 LPSSPSSRCCGHALSLNYPFSPRE--------------------IPTCGRKLTCKAAEVS 73
+ ++ +++ H LSL+ P R+ + R++TCKA EVS
Sbjct: 1 MATAAATKLTPHLLSLSSPLRRRKPLLHHLPPPLPRNDRSSALTLGLSSRRITCKATEVS 60
Query: 74 VTEEESSASGGGGGGENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPA 133
V EE S+A GG NWVPVVPLSALPKGERRVIIQDGETILLLWYKD+V+AIENRSPA
Sbjct: 61 VAEESSAAGDGG----NWVPVVPLSALPKGERRVIIQDGETILLLWYKDQVYAIENRSPA 116
Query: 134 EGAYSEGLINAKLTQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPV 193
EGAYSEGL+NAKLTQ TG ++DWYP NPVLR LTPAL TL+I+PV
Sbjct: 117 EGAYSEGLLNAKLTQ----------------TGEIKDWYPKNPVLRVLTPALRTLFIYPV 160
Query: 194 KTDEKNIYIRMEGGASSDASAEIVFSGKAQPGVTATDVNIEEVRMVVDEDLEGFGFNVTS 253
KTD+KNIYIRM GG SSDASAEIVFSGKAQPG+TATDVN+EEVRM+VDED EGFGF +
Sbjct: 161 KTDDKNIYIRMSGGVSSDASAEIVFSGKAQPGLTATDVNVEEVRMIVDEDQEGFGFTGKN 220
Query: 254 ELINGKAAAIGFLLLLDFELLTGKGLLKGTGFLDFIYSVAGALN 297
ELINGKAA +GFLLLLDFELLTGKG+LKGTGFLDF+Y+V+ A
Sbjct: 221 ELINGKAAVVGFLLLLDFELLTGKGILKGTGFLDFLYAVSNAFK 264
>gi|18409870|ref|NP_565018.1| Rieske (2Fe-2S) domain-containing protein [Arabidopsis thaliana]
gi|12323736|gb|AAG51832.1|AC016163_21 unknown protein; 39989-38742 [Arabidopsis thaliana]
gi|20260264|gb|AAM13030.1| unknown protein [Arabidopsis thaliana]
gi|21592833|gb|AAM64783.1| unknown [Arabidopsis thaliana]
gi|22136512|gb|AAM91334.1| unknown protein [Arabidopsis thaliana]
gi|26453214|dbj|BAC43681.1| unknown protein [Arabidopsis thaliana]
gi|332197087|gb|AEE35208.1| Rieske (2Fe-2S) domain-containing protein [Arabidopsis thaliana]
Length = 287
Score = 333 bits (855), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 184/297 (61%), Positives = 221/297 (74%), Gaps = 12/297 (4%)
Query: 1 MASTPSP-FPQNYTFARPQAGSISRRKPPPTRQPLPSSPSSRCCGHALSLNYPFSPREIP 59
MA+T S P+NY+F P+ S R P PL + R ++L Y
Sbjct: 1 MATTASSSLPRNYSFTTPRPSSFIRGPPLARTLPLYLRRNRR-----VALTYRLDQNSKQ 55
Query: 60 TCGRKLTCKAAEVSVTEEESSASGGGGGGENWVPVVPLSALPKGERRVIIQDGETILLLW 119
G + C+A EVS + S+ G NWVPVVPLSALPKGERRV+IQD ETILLLW
Sbjct: 56 RSGGNVRCEATEVSSSSSVSTP------GRNWVPVVPLSALPKGERRVVIQDDETILLLW 109
Query: 120 YKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLR 179
YK++VFAIENRSPAEGAYSEGL+NA+LTQDGCIVCP+T+STFDLRTG +R+WYP NPVLR
Sbjct: 110 YKNDVFAIENRSPAEGAYSEGLLNARLTQDGCIVCPSTDSTFDLRTGEIREWYPKNPVLR 169
Query: 180 ALTPALSTLYIFPVKTDEKNIYIRMEGGASSDASAEIVFSGKAQPGVTATDVNIEEVRMV 239
LTPAL L+++PVK DE+NIYI + ++A+AEIVFSGKAQPG+TAT+VN++EVRM+
Sbjct: 170 VLTPALRKLFVYPVKYDEENIYISIRDSGKTEAAAEIVFSGKAQPGLTATNVNVDEVRMI 229
Query: 240 VDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFLDFIYSVAGAL 296
VDE EGFGF +E+INGKAA IGFLLLLDFELLTGKGLLKGTGFLDF+YS + A
Sbjct: 230 VDEGSEGFGFTKKNEVINGKAAVIGFLLLLDFELLTGKGLLKGTGFLDFLYSASDAF 286
>gi|297838989|ref|XP_002887376.1| hypothetical protein ARALYDRAFT_476280 [Arabidopsis lyrata subsp.
lyrata]
gi|297333217|gb|EFH63635.1| hypothetical protein ARALYDRAFT_476280 [Arabidopsis lyrata subsp.
lyrata]
Length = 286
Score = 326 bits (836), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 186/298 (62%), Positives = 224/298 (75%), Gaps = 15/298 (5%)
Query: 1 MASTPSP-FPQNYTFARPQAGSISRRKPPPTRQPLPSSPSSRCCGHALSLNYPFSPR-EI 58
MA+T S P+NY+F P+ S R P PL + R L+L Y +
Sbjct: 1 MATTASSSLPRNYSFTPPRPPPSSIRGPGTL--PLYLRRNRR-----LALTYRLDQNSKR 53
Query: 59 PTCGRKLTCKAAEVSVTEEESSASGGGGGGENWVPVVPLSALPKGERRVIIQDGETILLL 118
+ G + C+A EVS + S+ G NWVPVVPLSALPKGERRV+IQD ETILLL
Sbjct: 54 RSGGGNVRCEATEVSSSSSVSTP------GRNWVPVVPLSALPKGERRVVIQDDETILLL 107
Query: 119 WYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTGAVRDWYPNNPVL 178
WYK++VFAIENRSPAEGAYSEGL+NA+LTQDGCIVCP+T+STFDLRTG +R+WYP NPVL
Sbjct: 108 WYKNDVFAIENRSPAEGAYSEGLLNARLTQDGCIVCPSTDSTFDLRTGEIREWYPKNPVL 167
Query: 179 RALTPALSTLYIFPVKTDEKNIYIRMEGGASSDASAEIVFSGKAQPGVTATDVNIEEVRM 238
R LTPAL L+++PVK DE+NIYI + ++A+AEIVFSGKAQPG+TAT+VN++EVRM
Sbjct: 168 RVLTPALRKLFVYPVKYDEENIYISIRDSGKTEAAAEIVFSGKAQPGLTATNVNVDEVRM 227
Query: 239 VVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFLDFIYSVAGAL 296
+VDE EGFGF V +E+INGKAA IGFLLLLDFELLTGKGLLKGTGFLDF+YS + A
Sbjct: 228 IVDEGSEGFGFTVKNEVINGKAAVIGFLLLLDFELLTGKGLLKGTGFLDFLYSASDAF 285
>gi|242055463|ref|XP_002456877.1| hypothetical protein SORBIDRAFT_03g044430 [Sorghum bicolor]
gi|241928852|gb|EES01997.1| hypothetical protein SORBIDRAFT_03g044430 [Sorghum bicolor]
Length = 231
Score = 310 bits (793), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 146/189 (77%), Positives = 170/189 (89%), Gaps = 1/189 (0%)
Query: 109 IQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTGAV 168
+QDGE ILLLWYKD+VFAIENRSPAEGAY+EGL+NAKLTQDGCIVCP+T+STFDLRTG +
Sbjct: 44 LQDGEEILLLWYKDQVFAIENRSPAEGAYTEGLLNAKLTQDGCIVCPSTDSTFDLRTGEI 103
Query: 169 RDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEGGASSDASAEIVFSGKAQPGVTA 228
++WYP NPVLRALTPAL L+ + VKTD++NIYI + G+ S SAEI+FSGKAQPGVTA
Sbjct: 104 KEWYPKNPVLRALTPALRKLFTYRVKTDDENIYISI-SGSDSVGSAEIIFSGKAQPGVTA 162
Query: 229 TDVNIEEVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFLDF 288
+DVN+EEVRM+VDED+ GFGF +ELINGKAA IGFLLL+DFELLTGKGLLKGTGFLDF
Sbjct: 163 SDVNVEEVRMIVDEDVGGFGFTSENELINGKAAIIGFLLLIDFELLTGKGLLKGTGFLDF 222
Query: 289 IYSVAGALN 297
IY+V+GA N
Sbjct: 223 IYAVSGAFN 231
>gi|255638015|gb|ACU19323.1| unknown [Glycine max]
Length = 227
Score = 302 bits (774), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 151/210 (71%), Positives = 173/210 (82%), Gaps = 16/210 (7%)
Query: 34 LPSSPSSR-CCGHALSLNYPFSPREIPTCGRKLTCKAAEVSVTEEESSASGGGGGGENWV 92
LPS P C H+L L Y +PR LTCKAA+VSV EE S++ G+NWV
Sbjct: 21 LPSPPKPLFLCRHSL-LRYRSTPR--------LTCKAAQVSVAEESSAS------GDNWV 65
Query: 93 PVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCI 152
PVVPLSALPKGERRVIIQDGETILLLWYKD+VFAIENRSPAEGAY+EGL+NAKLTQDGCI
Sbjct: 66 PVVPLSALPKGERRVIIQDGETILLLWYKDQVFAIENRSPAEGAYTEGLLNAKLTQDGCI 125
Query: 153 VCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEGGASSDA 212
VCP+T+STFDLRTG +++WYP NPVLR LTPAL L+I+PVKTDE+NIYI + GG SDA
Sbjct: 126 VCPSTDSTFDLRTGDIKEWYPKNPVLRVLTPALRKLFIYPVKTDEQNIYISIRGGVRSDA 185
Query: 213 SAEIVFSGKAQPGVTATDVNIEEVRMVVDE 242
SAEIVFSGKAQPG TATDVN++EV+M+VDE
Sbjct: 186 SAEIVFSGKAQPGFTATDVNVDEVKMIVDE 215
>gi|148908261|gb|ABR17245.1| unknown [Picea sitchensis]
Length = 302
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 162/278 (58%), Positives = 199/278 (71%), Gaps = 15/278 (5%)
Query: 36 SSPSSRCCGHA-------LSLNYPFSPREIPTCGRK-----LTCKAAEVSVTEEESSASG 83
S PSS G + L+L+ P +P K + C A+EVSV +EE +
Sbjct: 25 SYPSSNFGGRSVFFRSKNLNLSLGLIPFNVPAVTNKRNTLPIRCNASEVSVADEEGPSPS 84
Query: 84 GGG---GGENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEG 140
+NWVPVVP SALPKGERR+I QDG+ ILLLWYK+EV AIEN+SPAEGAYSEG
Sbjct: 85 ISPPSMDNKNWVPVVPASALPKGERRLIRQDGDNILLLWYKNEVVAIENKSPAEGAYSEG 144
Query: 141 LINAKLTQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNI 200
L+NAKLTQDGCI+CPTT+STF+L+TG + +WYPNNPVLR LTP + L+++P K D + I
Sbjct: 145 LVNAKLTQDGCIMCPTTDSTFNLKTGDIEEWYPNNPVLRLLTPPIRKLFVYPTKVDSEYI 204
Query: 201 YIRMEGGASSDASAEIVFSGKAQPGVTATDVNIEEVRMVVDEDLEGFGFNVTSELINGKA 260
YI M ++ EIVFSGK Q G+TA+DVN+EEVRMVVDE GFGF +ELING+A
Sbjct: 205 YISMGRAGGTEDPTEIVFSGKTQAGITASDVNVEEVRMVVDEGETGFGFTTKNELINGRA 264
Query: 261 AAIGFLLLLDFELLTGKGLLKGTGFLDFIYSVAGALNK 298
A G LL+FELLTGKGLLKGTGFLDF+Y+V+GAL +
Sbjct: 265 AIAGLFFLLNFELLTGKGLLKGTGFLDFLYAVSGALRQ 302
>gi|302787777|ref|XP_002975658.1| hypothetical protein SELMODRAFT_449457 [Selaginella moellendorffii]
gi|300156659|gb|EFJ23287.1| hypothetical protein SELMODRAFT_449457 [Selaginella moellendorffii]
Length = 283
Score = 266 bits (680), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 132/229 (57%), Positives = 165/229 (72%), Gaps = 3/229 (1%)
Query: 65 LTCKAAE--VSVTEEESSASGGGGGGENWVPVVPLSALPKGERRVIIQDGETILLLWYKD 122
L C ++ + T +SS GG +W+PVVP + LP+GERR++ Q+ ETILLLWYK+
Sbjct: 51 LKCSSSSEITTATTPDSSEEEEAGGAGSWIPVVPFATLPRGERRLVRQENETILLLWYKN 110
Query: 123 EVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALT 182
+V+A+EN+SPAEGAYSEGLINAKLT DGCIVCP+T STF L+TG ++DWYP NPV++ L
Sbjct: 111 DVYAVENKSPAEGAYSEGLINAKLTPDGCIVCPSTSSTFSLQTGEIKDWYPTNPVMKLLL 170
Query: 183 PALSTLYIFPVKTDEKNIYIRMEGGASSDASAEIVFSGKAQPGVTATDVNIEEVRMVV-D 241
L +PVK D IYI + A S EIVFSG G TA+DVNIEEVRMVV D
Sbjct: 171 QPTRNLVTYPVKIDGDYIYINTQQQAEDKKSTEIVFSGPTFAGRTASDVNIEEVRMVVED 230
Query: 242 EDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFLDFIY 290
E+ FGF +E+ NG+AA +GF LLL FEL+TGKG L+GTGFLDF+Y
Sbjct: 231 ENKRVFGFTPENEITNGRAAMMGFSLLLVFELVTGKGFLRGTGFLDFLY 279
>gi|302794153|ref|XP_002978841.1| hypothetical protein SELMODRAFT_449459 [Selaginella moellendorffii]
gi|300153650|gb|EFJ20288.1| hypothetical protein SELMODRAFT_449459 [Selaginella moellendorffii]
Length = 283
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 130/230 (56%), Positives = 165/230 (71%), Gaps = 3/230 (1%)
Query: 65 LTCKAAE--VSVTEEESSASGGGGGGENWVPVVPLSALPKGERRVIIQDGETILLLWYKD 122
L C ++ + T +SS G +W+PVVP + LP+GERR++ Q+ ETILLLWYK+
Sbjct: 51 LKCSSSSEITTATTPDSSEEEEDGDAGSWIPVVPFATLPRGERRLVRQENETILLLWYKN 110
Query: 123 EVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALT 182
+V+A+EN+SPAEGAYSEGLINAKLT DGCIVCP+T STF L+TG ++DWYP NPV++ L
Sbjct: 111 DVYAVENKSPAEGAYSEGLINAKLTPDGCIVCPSTSSTFSLQTGEIKDWYPTNPVMKLLI 170
Query: 183 PALSTLYIFPVKTDEKNIYIRMEGGASSDASAEIVFSGKAQPGVTATDVNIEEVRMVV-D 241
L +PVK D I I + A SAEIVFSG+ G TA+DVNIEEVRMVV D
Sbjct: 171 QPTRNLVTYPVKIDGDYICINTQQQAEDKKSAEIVFSGQTFAGRTASDVNIEEVRMVVED 230
Query: 242 EDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFLDFIYS 291
E+ FGF +E+ NG+AA +GF +LL FEL+TGKG L+GTGFLDF+Y
Sbjct: 231 ENKRVFGFTPENEITNGRAAMMGFSVLLVFELVTGKGFLRGTGFLDFLYQ 280
>gi|168056098|ref|XP_001780059.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668557|gb|EDQ55162.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 222
Score = 260 bits (664), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 130/227 (57%), Positives = 172/227 (75%), Gaps = 12/227 (5%)
Query: 71 EVSVTEEESSASGGGGGGENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR 130
+VSV++ + A G NWVPV+PL+ALP+GERR++ QDGET+LLLWYK++V+AIEN+
Sbjct: 1 DVSVSQASAEARPSQASG-NWVPVIPLAALPRGERRLVRQDGETVLLLWYKNDVYAIENQ 59
Query: 131 SPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYI 190
SPAEGAYSEGLINA+LT DGCIVCP+TEST+DL++G V++W P NPVLR LTP+L L
Sbjct: 60 SPAEGAYSEGLINARLTPDGCIVCPSTESTYDLKSGKVKEWMPTNPVLRVLTPSLRDLVT 119
Query: 191 FPVKTDEKNIYIRMEGGASSDASAEIVFSGKA--QPGVTATDVNIEE-----VRMVVDED 243
+PVK ++++IYI + GG AEIVF G A G TAT+++++E V+M V E
Sbjct: 120 YPVKVEDESIYINVRGG----GYAEIVFGGAASGNAGRTATNIDVDEACSTSVKMEVVET 175
Query: 244 LEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFLDFIY 290
EGFG+ +E+ING+AA IGF +L+ EL+TGKG L G GFLDF+Y
Sbjct: 176 EEGFGWTRKNEIINGRAAMIGFFMLIIQELVTGKGFLAGLGFLDFLY 222
>gi|147791081|emb|CAN68019.1| hypothetical protein VITISV_027126 [Vitis vinifera]
Length = 268
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/92 (79%), Positives = 80/92 (86%), Gaps = 4/92 (4%)
Query: 63 RKLTCKAAEVSVTEEESSASGGGGGGENWVPVVPLSALPKGERRVIIQDGETILLLWYKD 122
R++TCKA EVSV EE S+A G GENWVPVVPLSALPKGERRVIIQDGETILLLWYKD
Sbjct: 123 RRITCKATEVSVAEESSAA----GDGENWVPVVPLSALPKGERRVIIQDGETILLLWYKD 178
Query: 123 EVFAIENRSPAEGAYSEGLINAKLTQDGCIVC 154
+V+AIENRSPAEGAYSEGL+NAKLTQ+ C
Sbjct: 179 QVYAIENRSPAEGAYSEGLLNAKLTQEFAYKC 210
>gi|296084458|emb|CBI25017.3| unnamed protein product [Vitis vinifera]
Length = 90
Score = 144 bits (363), Expect = 5e-32, Method: Composition-based stats.
Identities = 72/93 (77%), Positives = 81/93 (87%), Gaps = 4/93 (4%)
Query: 204 MEGGASSDASAEIVFSGKAQPGVTATDVNIEEVRMVVDEDLEGFGFNVTSELINGKAAAI 263
M GG SSDASAEIVFSGKAQPG+TATDVN+EEVRM+VDED EGFGF +ELINGKAA
Sbjct: 1 MSGGVSSDASAEIVFSGKAQPGLTATDVNVEEVRMIVDEDQEGFGFTGKNELINGKAA-- 58
Query: 264 GFLLLLDFELLTGKGLLKGTGFLDFIYSVAGAL 296
+LLLDFELLTGKG+LKGTGFLDF+Y+V+ A
Sbjct: 59 --VLLLDFELLTGKGILKGTGFLDFLYAVSNAF 89
>gi|145345225|ref|XP_001417117.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577344|gb|ABO95410.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 238
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/129 (50%), Positives = 91/129 (70%), Gaps = 2/129 (1%)
Query: 82 SGGGGGGENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGL 141
S G E+ V L LP+G+R+++ G++IL+ WY+D VFAIE+RSPAEGAYSEG
Sbjct: 2 SASADGAESMTRVCALEELPRGDRKLVRALGKSILMFWYRDTVFAIESRSPAEGAYSEGF 61
Query: 142 INAKLTQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALST--LYIFPVKTDEKN 199
A+LTQD CI CPTT+S FDL+TG +++WYP NPVL+ALTP + + +FPV+ +
Sbjct: 62 EKARLTQDACIECPTTKSKFDLKTGEIKEWYPENPVLKALTPQDTCRPMEVFPVEVRDDG 121
Query: 200 IYIRMEGGA 208
IY+ + G+
Sbjct: 122 IYLDAKNGS 130
>gi|159477387|ref|XP_001696792.1| rieske [2Fe-2S] protein [Chlamydomonas reinhardtii]
gi|158275121|gb|EDP00900.1| rieske [2Fe-2S] protein [Chlamydomonas reinhardtii]
Length = 306
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 119/220 (54%), Gaps = 14/220 (6%)
Query: 26 KPPPTRQPLPSSPSSRCCGHALSLNYPFSPREIPTCGRK---LTCKAAEVSVTEEESSAS 82
K R +P+ RC L + FS + + L +A E SV E + AS
Sbjct: 12 KSSQARVLVPAGLGRRC----LPVRPAFSSANVQKVANRAAALRVRATEESV-EVKPVAS 66
Query: 83 GGGGGGENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLI 142
WVPV LPKG R+ + DG +L+ WY+++++AIE RSPAEGAYSEG I
Sbjct: 67 TSESSEPEWVPVCKPEDLPKGVRKEVEVDGRQVLMFWYRNQIYAIEARSPAEGAYSEGFI 126
Query: 143 NAKLTQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPA--LSTLYIFPVKTDEKNI 200
AK TQD I CP+T S F L+ G+++ WYPNNPVLR LTP+ L I+PVK ++ I
Sbjct: 127 KAKFTQDYAIECPSTGSLFSLKDGSIQAWYPNNPVLRTLTPSQFCRPLEIYPVKLAQEAI 186
Query: 201 YIRMEGGASSDASAEIVFSGKAQPGVTATDVNIEEVRMVV 240
Y+ + ++A V G+ G +A + N+ V+ V
Sbjct: 187 YVDVSDSRYNNA----VTRGRGGAGTSAENNNVFTVQPTV 222
>gi|255081861|ref|XP_002508149.1| rieske [2Fe-2S] domain protein protein [Micromonas sp. RCC299]
gi|226523425|gb|ACO69407.1| rieske [2Fe-2S] domain protein protein [Micromonas sp. RCC299]
Length = 312
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 96/153 (62%), Gaps = 2/153 (1%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+V + LP+G R+ + G++IL+ WYKD + AIE+RSPAEGA+SEG NA+LTQD
Sbjct: 81 TFVKICDADELPRGTRKKVSALGKSILMFWYKDSMVAIESRSPAEGAFSEGFENARLTQD 140
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALST--LYIFPVKTDEKNIYIRMEGG 207
GCIVCP+T STFDL+TG ++DWYP+NPVLR LTP + + +FP +Y+ ++ G
Sbjct: 141 GCIVCPSTRSTFDLKTGEIKDWYPDNPVLRRLTPIETCRPMEVFPCLARPDGVYVDVKNG 200
Query: 208 ASSDASAEIVFSGKAQPGVTATDVNIEEVRMVV 240
+ G + + +V E +MVV
Sbjct: 201 SLGPDFVAPATKGGSNTSLENNNVYAVEPQMVV 233
>gi|308802426|ref|XP_003078526.1| Rieske (ISS) [Ostreococcus tauri]
gi|116056979|emb|CAL51406.1| Rieske (ISS) [Ostreococcus tauri]
Length = 229
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 100/153 (65%), Gaps = 4/153 (2%)
Query: 97 LSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPT 156
+ LP+GER+++ G++ILL WY+D VFAIE+RSPAEGAYSEG A+LTQD CI CPT
Sbjct: 7 MDELPRGERKLVRMLGKSILLFWYRDTVFAIESRSPAEGAYSEGFERARLTQDACIECPT 66
Query: 157 TESTFDLRTGAVRDWYPNNPVLRALTPALST--LYIFPVKTDEKNIYIRMEGGA-SSDAS 213
T++ FDL+TG +++WYP+NPVL LTP + + +FPV IY+ + G+ D
Sbjct: 67 TKTKFDLKTGEIKEWYPDNPVLARLTPKDTCRPMEVFPVDMRADGIYVDAKNGSLGPDFV 126
Query: 214 AEIVFSGKAQPGVTATDVNIEEVRMVVDEDLEG 246
A I F G + + + +V E M V+ + +G
Sbjct: 127 APIGFGG-SNTSLESNNVFAVETPMYVEGEQQG 158
>gi|412993360|emb|CCO16893.1| predicted protein [Bathycoccus prasinos]
Length = 344
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 100/158 (63%), Gaps = 4/158 (2%)
Query: 89 ENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQ 148
E+++ ++ S LP+G+R+ I G++ILL WY+D + AIE+RSP+EGAYSEG A+LTQ
Sbjct: 110 ESYIKLLSFSDLPRGDRKKIDALGKSILLFWYRDTICAIESRSPSEGAYSEGFERARLTQ 169
Query: 149 DGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTP--ALSTLYIFP--VKTDEKNIYIRM 204
D CI CPTT++TFDL+TG ++ WYP+NPVL LTP + +FP V +E IY+ +
Sbjct: 170 DACIECPTTKTTFDLKTGEIKAWYPDNPVLAKLTPQETCRNMEVFPVVVAEEEDAIYVGV 229
Query: 205 EGGASSDASAEIVFSGKAQPGVTATDVNIEEVRMVVDE 242
+ G+ F G + + +V E RM ++
Sbjct: 230 KDGSLGPGFVSQSFKGGSDTSLENNNVFGIEPRMYTED 267
>gi|384248165|gb|EIE21650.1| hypothetical protein COCSUDRAFT_30146 [Coccomyxa subellipsoidea
C-169]
Length = 239
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 101/179 (56%), Gaps = 5/179 (2%)
Query: 34 LPSSPSSRCCGHALSLNYPFSPREIPTCGRKLTCKAAEVSVTEEESSASGGGGGGENWVP 93
L S P S + L+ F + + R ++ E V E+S +NWVP
Sbjct: 28 LRSLPRSSVPSRQVQLSKLFKSGLLLSQRRSCVTRSTEQEVKAAETSEESIS---DNWVP 84
Query: 94 VVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIV 153
V +PKG R + G +LLLWY+++++AIE RSPA GAYSEG IN+KLTQ+ I
Sbjct: 85 VCRPEEIPKGYRFEVKAQGVDVLLLWYRNQIYAIEQRSPAAGAYSEGFINSKLTQEYEIE 144
Query: 154 CPTTESTFDLRTGAVRDWYPNNPVLRALTP--ALSTLYIFPVKTDEKNIYIRMEGGASS 210
CP T+S F L+TG + WYP NPVLR +TP + L ++PVK + I + + G A++
Sbjct: 145 CPDTKSLFSLKTGEITAWYPTNPVLRLVTPQDTVRNLDVYPVKLTQDAILVDVSGAATT 203
>gi|307106120|gb|EFN54367.1| hypothetical protein CHLNCDRAFT_58270 [Chlorella variabilis]
Length = 261
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 89/155 (57%), Gaps = 5/155 (3%)
Query: 59 PTCGRKLTCKAAEVSVTEEESSASGG---GGGGENWVPVVPLSALPKGERRVIIQDGETI 115
P C R + E ES ++ +VP V LPKG R+ + G+T+
Sbjct: 32 PACRRPQRQRVLRAVANEAESVSAASTTPSAPPPGFVPAVRPEDLPKGVRKEVRVAGKTV 91
Query: 116 LLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTGAVRDWYPNN 175
LL WY+++++AIE RSPAEGAYSEG I AK TQD CI CP T S F L+ G++ WYPNN
Sbjct: 92 LLFWYRNQIYAIEARSPAEGAYSEGFIKAKFTQDFCIECPGTGSLFSLKDGSIVSWYPNN 151
Query: 176 PVLRALTPALST--LYIFPVKTDEKNIYIRMEGGA 208
PVLR LTP + L I+PV + I + + G A
Sbjct: 152 PVLRMLTPPSTCRPLEIYPVHLGQDAISVDVSGSA 186
>gi|359495283|ref|XP_003634947.1| PREDICTED: uncharacterized protein LOC100853062 [Vitis vinifera]
Length = 213
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/57 (78%), Positives = 48/57 (84%), Gaps = 4/57 (7%)
Query: 62 GRKLTCKAAEVSVTEEESSASGGGGGGENWVPVVPLSALPKGERRVIIQDGETILLL 118
R++TCKA EVSV EE S+A G GENWVPVVPLSALPKGERRVIIQDGETILLL
Sbjct: 161 SRRITCKATEVSVAEEPSAA----GDGENWVPVVPLSALPKGERRVIIQDGETILLL 213
>gi|126658304|ref|ZP_01729454.1| Rieske (2Fe-2S) region [Cyanothece sp. CCY0110]
gi|126620453|gb|EAZ91172.1| Rieske (2Fe-2S) region [Cyanothece sp. CCY0110]
Length = 119
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 69/117 (58%), Gaps = 6/117 (5%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDG 150
W V+ + +LP G R+V+ + ILLL + +V+A++N P L AK+ +DG
Sbjct: 3 WTKVLAVDSLPIGSRQVVKTENHNILLLNHNGQVYAVKNSCPH---LKISLKKAKINEDG 59
Query: 151 CIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALS---TLYIFPVKTDEKNIYIRM 204
+VCP S FDL+TGAV++W P P++ +S L +FPVKT+E NI++ +
Sbjct: 60 DLVCPMHRSAFDLKTGAVKEWTPWPPLVGKAMGMISQEKALSVFPVKTEEGNIWVDL 116
>gi|172035722|ref|YP_001802223.1| hypothetical protein cce_0806 [Cyanothece sp. ATCC 51142]
gi|354554962|ref|ZP_08974265.1| Rieske (2Fe-2S) iron-sulfur domain protein [Cyanothece sp. ATCC
51472]
gi|171697176|gb|ACB50157.1| unknown [Cyanothece sp. ATCC 51142]
gi|353553116|gb|EHC22509.1| Rieske (2Fe-2S) iron-sulfur domain protein [Cyanothece sp. ATCC
51472]
Length = 119
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 68/118 (57%), Gaps = 6/118 (5%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W V+ + LP G R+V+ +LLL +K +V+A++N P L AK+ +D
Sbjct: 2 SWTKVLTVDDLPMGSRQVVKTGNHNLLLLNHKGQVYAVKNSCPH---LKISLKKAKINED 58
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALS---TLYIFPVKTDEKNIYIRM 204
G +VCP S FDL TGAV++W P P++ +S L +FPVKT+E +I++ +
Sbjct: 59 GDLVCPMHRSAFDLTTGAVKEWTPWPPLVGKAMGMISQEKALSVFPVKTEEGSIWVDL 116
>gi|428203096|ref|YP_007081685.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Pleurocapsa sp. PCC 7327]
gi|427980528|gb|AFY78128.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Pleurocapsa sp. PCC 7327]
Length = 119
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 70/118 (59%), Gaps = 6/118 (5%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDG 150
W V+ + +LP GER+V+ +LLL + +++A++N P L N K+T+DG
Sbjct: 3 WTKVLSVESLPTGERQVVKVGKRNVLLLNLEGQLYAVDNTCPH---LKLPLKNGKITEDG 59
Query: 151 CIVCPTTESTFDLRTGAVRDWYPNNP-VLRAL--TPALSTLYIFPVKTDEKNIYIRME 205
IVCP S FDLRTG V++W P P V +AL S L +FPV+ +E +I+I +E
Sbjct: 60 AIVCPWHRSAFDLRTGDVKEWSPWPPGVGKALGMISRQSALPVFPVRVEEGSIWIDVE 117
>gi|257059205|ref|YP_003137093.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 8802]
gi|256589371|gb|ACV00258.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 8802]
Length = 116
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 67/116 (57%), Gaps = 6/116 (5%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W V+ LP G+R V+ ILLL ++ +++A+ R P + + K+T+D
Sbjct: 2 SWTKVLAADQLPTGKREVVKVGERNILLLNHEGQIYAVARRCPH---MNIKMTRGKITED 58
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALS---TLYIFPVKTDEKNIYI 202
G IVCP S+FDL+TG V++W P PV+ + LS L +FP+K +E +I++
Sbjct: 59 GTIVCPMHRSSFDLKTGCVKEWTPFPPVVGKMMGKLSPEKPLPVFPIKVEEGSIWV 114
>gi|218246156|ref|YP_002371527.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 8801]
gi|218166634|gb|ACK65371.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 8801]
Length = 116
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 67/116 (57%), Gaps = 6/116 (5%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W V+ LP G+R V+ ILLL ++ +++A+ R P + + K+T+D
Sbjct: 2 SWTKVLAADQLPTGKREVVKVGERNILLLNHEGQIYAVARRCPH---MNIKMTRGKITED 58
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALS---TLYIFPVKTDEKNIYI 202
G IVCP S+FDL+TG V++W P PV+ + LS L +FP+K +E +I++
Sbjct: 59 GTIVCPMHRSSFDLKTGCVKEWTPFPPVVGKMIGKLSPEKPLPVFPIKVEEGSIWV 114
>gi|119513504|ref|ZP_01632526.1| Rieske (2Fe-2S) region protein [Nodularia spumigena CCY9414]
gi|119461843|gb|EAW42858.1| Rieske (2Fe-2S) region protein [Nodularia spumigena CCY9414]
Length = 122
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 67/118 (56%), Gaps = 6/118 (5%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDG 150
W V+ AL R+V+ ILL+ ++ +V+A++N P + N K+T+ G
Sbjct: 7 WTKVLAADALASEGRQVVKVGTRKILLVNHESQVYAVDNTCPH---LKMPMKNGKITEGG 63
Query: 151 CIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALS---TLYIFPVKTDEKNIYIRME 205
IVCP S FDLRTG V+DW P PV+ + +S TL +FPV+ +E +I+I +E
Sbjct: 64 AIVCPIHRSAFDLRTGEVQDWCPWPPVVGTILSKISQSKTLSVFPVRVEEGSIWIDLE 121
>gi|307151405|ref|YP_003886789.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7822]
gi|306981633|gb|ADN13514.1| Rieske (2Fe-2S) iron-sulfur domain protein [Cyanothece sp. PCC
7822]
Length = 116
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 68/118 (57%), Gaps = 6/118 (5%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W V+ + AL G+R+++ + ILL+ + +++A++ P + N K+T++
Sbjct: 2 SWTKVLSVDALAPGQRKIVTVGQQKILLINHNGQLYAVDKACPH---LKLSMKNGKITEE 58
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVL---RALTPALSTLYIFPVKTDEKNIYIRM 204
G I+CP +S+FDLR+G DW P PV+ A+ L +FPV+ +E +I++ +
Sbjct: 59 GSIICPWHKSSFDLRSGEATDWTPWPPVVGKAMAMVAKPKPLQVFPVRVEEDSIWVEV 116
>gi|427729345|ref|YP_007075582.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Nostoc sp. PCC 7524]
gi|427365264|gb|AFY47985.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Nostoc sp. PCC 7524]
Length = 116
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 6/116 (5%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
NW+ V+ LP R+ + + ILL+ + ++VFA+EN P + K+T D
Sbjct: 2 NWIQVLSQDELPPNGRKAVKVEQRKILLINHNNQVFAVENSCPH---MKLPMQKGKITDD 58
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALST---LYIFPVKTDEKNIYI 202
G IVCP S FDL TG ++W P P + L +S L +FP + +E NI++
Sbjct: 59 GAIVCPFHRSAFDLSTGNPKEWTPFPPGIGKLMGMISPEKGLSVFPTRVEEGNIWV 114
>gi|218440377|ref|YP_002378706.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7424]
gi|218173105|gb|ACK71838.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 7424]
Length = 116
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 66/118 (55%), Gaps = 6/118 (5%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W V+P+ AL G+R+V+ + ILL+ + +++A+ N P + N K+T+
Sbjct: 2 SWTKVLPVEALASGQRQVVSVGQQKILLINHNGQLYAVNNACPH---LKLSMKNGKITEQ 58
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVL---RALTPALSTLYIFPVKTDEKNIYIRM 204
G I+CP +S FDL++G DW P P++ + L +FPV+ ++ +I++ +
Sbjct: 59 GSIICPWHKSAFDLQSGEATDWTPWPPLVGKAMGMVSKQKPLQVFPVRIEDNSIWVEV 116
>gi|17228416|ref|NP_484964.1| hypothetical protein all0921 [Nostoc sp. PCC 7120]
gi|17130267|dbj|BAB72878.1| all0921 [Nostoc sp. PCC 7120]
Length = 116
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 6/116 (5%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
NW+ V+ LP R+V+ + ILLL + ++VFA+EN P L K+T D
Sbjct: 2 NWIKVIGQDELPPNGRKVVKVEQRNILLLNHNNQVFAVENSCP---HLKLPLQKGKITDD 58
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALST---LYIFPVKTDEKNIYI 202
G IVCP S FDL +G +W P P + + +S L +FP + +E +I++
Sbjct: 59 GAIVCPFHRSAFDLTSGNPTEWTPFPPGIGKVMGMISKEKGLSVFPTRVEEGSIWV 114
>gi|75910719|ref|YP_325015.1| Rieske (2Fe-2S) protein [Anabaena variabilis ATCC 29413]
gi|75704444|gb|ABA24120.1| Rieske (2Fe-2S) region [Anabaena variabilis ATCC 29413]
Length = 116
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
NW+ V+ LP R+V+ + ILLL + ++VFA+EN P L K+T D
Sbjct: 2 NWIKVIGQDELPPNGRKVVKVEQRNILLLNHNNQVFAVENSCP---HLKLPLQKGKITDD 58
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALST---LYIFPVKTDEKNIYIRM 204
G IVCP S FDL +G +W P P + + +S L +FP + +E +I++ +
Sbjct: 59 GAIVCPFHRSAFDLTSGNPTEWTPFPPGIGKVMGMISKEKGLSVFPTRVEEGSIWVSI 116
>gi|297741036|emb|CBI31348.3| unnamed protein product [Vitis vinifera]
Length = 201
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 41/54 (75%), Gaps = 4/54 (7%)
Query: 62 GRKLTCKAAEVSVTEEESSASGGGGGGENWVPVVPLSALPKGERRVIIQDGETI 115
R++TCKA EVSV EE S+A G GENWVPVVPLSALPKGERR +++ + I
Sbjct: 84 SRRITCKATEVSVAEEPSAA----GDGENWVPVVPLSALPKGERRALLRLMQAI 133
>gi|359457782|ref|ZP_09246345.1| Rieske, 2Fe-2S protein [Acaryochloris sp. CCMEE 5410]
Length = 118
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 65/118 (55%), Gaps = 6/118 (5%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+WV V+ S L +G+R+++ + E ILL+ + + A++N P A L K+T D
Sbjct: 2 SWVKVLSESELDQGDRQIVKVEKEKILLVNHGGNICAVKNACPHLKA---PLSKGKITTD 58
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALST---LYIFPVKTDEKNIYIRM 204
G IVCP S FDL TG + W P P L L A+S L ++P + +E +I++ +
Sbjct: 59 GAIVCPLHRSAFDLATGVPKSWIPWPPGLGKLLGAISKERPLQVYPTRVEEGDIWVEI 116
>gi|158338088|ref|YP_001519264.1| Rieske, 2Fe-2S protein [Acaryochloris marina MBIC11017]
gi|158308329|gb|ABW29946.1| rieske, 2Fe-2S protein, putative [Acaryochloris marina MBIC11017]
Length = 118
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 64/118 (54%), Gaps = 6/118 (5%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+WV V+ S L G+R+++ + E ILL+ + + A++N P A L K+T D
Sbjct: 2 SWVKVLSESELDPGDRQIVKVEKEKILLVNHGGSICAVKNACPHLKA---PLSKGKITAD 58
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALST---LYIFPVKTDEKNIYIRM 204
G IVCP S FDL TG + W P P L L A+S L ++P + +E +I++ +
Sbjct: 59 GAIVCPLHRSAFDLATGIPKSWIPWPPGLGKLLGAISKEKPLQVYPTRVEEGDIWVEI 116
>gi|422303400|ref|ZP_16390751.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
gi|389791671|emb|CCI12570.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
Length = 116
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W V+ + +L G R+V+ +ILL+ + A+ NR P + K+T+D
Sbjct: 2 SWTKVLSVDSLAPGARQVVKVGDSSILLINNNGQFHAVGNRCPH---LKLSMTKGKITED 58
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALS---TLYIFPVKTDEKNIYI 202
G IVCP S+FDL TGAV+DW PV+ A+S L ++P++ ++ +I+I
Sbjct: 59 GAIVCPWHRSSFDLCTGAVKDWITWPPVVNKAMAAVSQPQALPVYPLRIEDGSIWI 114
>gi|390441385|ref|ZP_10229493.1| conserved hypothetical protein [Microcystis sp. T1-4]
gi|389835306|emb|CCI33619.1| conserved hypothetical protein [Microcystis sp. T1-4]
Length = 116
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W V+ + +L G R+V+ +ILL+ + A+ NR P + K+T+D
Sbjct: 2 SWTKVLSVDSLAPGARQVVKVGENSILLINNNGQFHAVGNRCPH---LKLSMTKGKITED 58
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALS---TLYIFPVKTDEKNIYI 202
G IVCP S+FDL TGAV+DW PV+ A+S L ++P++ ++ +I+I
Sbjct: 59 GAIVCPWHRSSFDLCTGAVKDWITWPPVVNKAMAAVSQPQALPVYPLRIEDGSIWI 114
>gi|443648742|ref|ZP_21130075.1| rieske [Microcystis aeruginosa DIANCHI905]
gi|159029935|emb|CAO90314.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443335099|gb|ELS49580.1| rieske [Microcystis aeruginosa DIANCHI905]
Length = 116
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 65/116 (56%), Gaps = 6/116 (5%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W V+ + +L G R+V+ +ILL+ ++ A+ NR P + K+T+D
Sbjct: 2 SWTKVLSVDSLAPGARQVVKVGENSILLINNNGQLHAVGNRCPH---LKLSMTKGKITED 58
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALS---TLYIFPVKTDEKNIYI 202
G IVCP S+FDL +GAV+DW PV+ A+S L ++P++ ++ +I+I
Sbjct: 59 GAIVCPWHRSSFDLCSGAVKDWITWPPVVNKAMAAVSQPQALPVYPLRIEDGSIWI 114
>gi|296108562|ref|YP_003620263.1| hypothetical protein lpa_04231 [Legionella pneumophila 2300/99
Alcoy]
gi|295650464|gb|ADG26311.1| Hypothetical protein lpa_04231 [Legionella pneumophila 2300/99
Alcoy]
Length = 117
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 62/115 (53%), Gaps = 6/115 (5%)
Query: 93 PVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCI 152
P V L L + R V + DG+ IL++W+ ++V AI+++ P L K+T+ I
Sbjct: 5 PAVELVKLQQNNREVAVIDGQKILIIWHDNQVHAIQSQCPH---LKLPLAKGKITESCSI 61
Query: 153 VCPTTESTFDLRTGAVRDWYPNNPVLRALTPALST---LYIFPVKTDEKNIYIRM 204
+CP +S FDL+TG + W P PV+ L +S+ L I+P + + + + +
Sbjct: 62 ICPFHKSEFDLKTGEAKCWSPWPPVVGNLLGKISSRKNLKIYPTQIENGQVLVDI 116
>gi|54298897|ref|YP_125266.1| hypothetical protein lpp2964 [Legionella pneumophila str. Paris]
gi|53752682|emb|CAH14117.1| hypothetical protein lpp2964 [Legionella pneumophila str. Paris]
Length = 117
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 61/113 (53%), Gaps = 6/113 (5%)
Query: 93 PVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCI 152
P V L L + R V + DG+ IL++W+ ++V AI+++ P L K+T+ I
Sbjct: 5 PAVELVKLQQNNREVAVIDGQKILIIWHDNQVHAIQSQCPH---LKLPLAKGKITESCSI 61
Query: 153 VCPTTESTFDLRTGAVRDWYPNNPVLRALTPALST---LYIFPVKTDEKNIYI 202
+CP +S FDL+TG + W P PV+ L +S+ L I+P + + + +
Sbjct: 62 ICPFHKSEFDLKTGEAKCWSPWPPVVGNLLGKISSRKNLKIYPTQIENGQVLV 114
>gi|425442119|ref|ZP_18822378.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
gi|389716982|emb|CCH98854.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
Length = 116
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W V+ + +L G R+V+ +ILL+ + A+ NR P + K+T+D
Sbjct: 2 SWTKVLSVDSLAPGARQVVKVGDSSILLINNNGQFHAVGNRCPH---LKLSMTKGKITED 58
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALS---TLYIFPVKTDEKNIYI 202
G IVCP S+FDL +GAV+DW PV+ A+S L ++P++ ++ +I+I
Sbjct: 59 GAIVCPWHRSSFDLCSGAVKDWITWPPVVNKAMAAVSQPQALPVYPLRIEDGSIWI 114
>gi|307611776|emb|CBX01484.1| hypothetical protein LPW_31721 [Legionella pneumophila 130b]
Length = 117
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 63/116 (54%), Gaps = 6/116 (5%)
Query: 93 PVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCI 152
P V L L + R V + DG+ IL++W+ ++V AI+++ P L K+T+ I
Sbjct: 5 PAVELVKLQQNNREVAVIDGQKILIIWHDNQVHAIQSQCPH---LKLPLAKGKITESCSI 61
Query: 153 VCPTTESTFDLRTGAVRDWYPNNPVLRALTPALST---LYIFPVKTDEKNIYIRME 205
+CP +S FDL+TG + W P PV+ L +S+ L I+P + + + + ++
Sbjct: 62 ICPFHKSEFDLKTGEAKCWSPWPPVVGNLLGKVSSRKNLKIYPTQIENGQVLVDVD 117
>gi|148361225|ref|YP_001252432.1| hypothetical protein LPC_3199 [Legionella pneumophila str. Corby]
gi|148282998|gb|ABQ57086.1| hypothetical protein LPC_3199 [Legionella pneumophila str. Corby]
Length = 117
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 61/113 (53%), Gaps = 6/113 (5%)
Query: 93 PVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCI 152
P V L L + R V + DG+ IL++W+ ++V AI+++ P L K+T+ I
Sbjct: 5 PAVELVKLQQNNREVAVIDGQKILIIWHDNQVHAIQSQCPH---LKLPLAKGKITESCSI 61
Query: 153 VCPTTESTFDLRTGAVRDWYPNNPVLRALTPALST---LYIFPVKTDEKNIYI 202
+CP +S FDL+TG + W P PV+ L +S+ L I+P + + + +
Sbjct: 62 ICPFHKSEFDLKTGEAKCWSPWPPVVGNLLGKVSSRKNLKIYPTQIENGQVLV 114
>gi|397665504|ref|YP_006507042.1| Rieske domain-containing protein. Part of Ubiquinol-cytochrome c
reductase (bc1 complex or complex III) [Legionella
pneumophila subsp. pneumophila]
gi|395128915|emb|CCD07136.1| Rieske domain-containing protein. Part of Ubiquinol-cytochrome c
reductase (bc1 complex or complex III) [Legionella
pneumophila subsp. pneumophila]
Length = 117
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 6/113 (5%)
Query: 93 PVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCI 152
P + L L + R V + DG+ IL++W+ ++V AI+++ P L K+T+ I
Sbjct: 5 PAIELVKLQQNNREVAVIDGQKILIIWHDNQVHAIQSQCPH---LKLPLAKGKITESCSI 61
Query: 153 VCPTTESTFDLRTGAVRDWYPNNPVLRALTPALST---LYIFPVKTDEKNIYI 202
+CP +S FDL+TG + W P PV+ L +S+ L I+P + + + +
Sbjct: 62 ICPFHKSEFDLKTGEAKCWSPWPPVVGNLLGKISSRKNLKIYPTQIENGQVLV 114
>gi|425471123|ref|ZP_18849983.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
gi|389883018|emb|CCI36546.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
Length = 116
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W V+ + +L G R+V+ +ILL+ + A+ NR P + K+++D
Sbjct: 2 SWTKVLSVDSLAPGARQVVKVGENSILLINNNGQFHAVGNRCPH---LKLSMTKGKISED 58
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALS---TLYIFPVKTDEKNIYI 202
G IVCP S+FDL TGAV+DW PV+ A+S L ++P++ ++ +I+I
Sbjct: 59 GAIVCPWHRSSFDLCTGAVKDWITWPPVVNKAMAAVSQPQALPVYPLRIEDGSIWI 114
>gi|425436428|ref|ZP_18816864.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
gi|425451300|ref|ZP_18831122.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
gi|425461821|ref|ZP_18841295.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
gi|440751865|ref|ZP_20931068.1| rieske [2Fe-2S] domain protein [Microcystis aeruginosa TAIHU98]
gi|389678867|emb|CCH92320.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
gi|389767502|emb|CCI07139.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
gi|389825243|emb|CCI25125.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
gi|440176358|gb|ELP55631.1| rieske [2Fe-2S] domain protein [Microcystis aeruginosa TAIHU98]
Length = 116
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W V+ + +L G R+V+ +ILL+ + A+ NR P + K+T+D
Sbjct: 2 SWTKVLSVDSLAPGARQVVKVGENSILLINNNGQFHAVGNRCPH---LKLSMTKGKITED 58
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALS---TLYIFPVKTDEKNIYI 202
G IVCP S+FDL +GAV+DW PV+ A+S L ++P++ ++ +I+I
Sbjct: 59 GAIVCPWHRSSFDLCSGAVKDWITWPPVVNKAMAAVSQPQALPVYPLRIEDGSIWI 114
>gi|54295726|ref|YP_128141.1| hypothetical protein lpl2814 [Legionella pneumophila str. Lens]
gi|53755558|emb|CAH17057.1| hypothetical protein lpl2814 [Legionella pneumophila str. Lens]
Length = 117
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 63/116 (54%), Gaps = 6/116 (5%)
Query: 93 PVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCI 152
P V L L + R V + DG+ IL++W+ ++V A++++ P L K+T+ I
Sbjct: 5 PAVELVKLQQNNREVAVIDGQKILIIWHDNQVHAVQSQCPH---LKLPLAKGKITESCSI 61
Query: 153 VCPTTESTFDLRTGAVRDWYPNNPVLRALTPALST---LYIFPVKTDEKNIYIRME 205
+CP +S FDL+TG + W P PV+ L +S+ L I+P + + + + ++
Sbjct: 62 ICPFHKSEFDLKTGEAKCWSPWPPVVGNLLGKVSSRKNLKIYPTQIENGQVLVDVD 117
>gi|397668573|ref|YP_006510110.1| Rieske domain-containing protein. Part of Ubiquinol-cytochrome c
reductase (bc1 complex or complex III) [Legionella
pneumophila subsp. pneumophila]
gi|395131984|emb|CCD10277.1| Rieske domain-containing protein. Part of Ubiquinol-cytochrome c
reductase (bc1 complex or complex III) [Legionella
pneumophila subsp. pneumophila]
Length = 117
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 6/113 (5%)
Query: 93 PVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCI 152
P + L L + R V + DG+ IL++W+ ++V AI+++ P L K+T+ I
Sbjct: 5 PAIELVKLQQNNREVAVIDGQKILIIWHDNQVHAIQSQCPH---LKLPLAKGKITESCSI 61
Query: 153 VCPTTESTFDLRTGAVRDWYPNNPVLRALTPALST---LYIFPVKTDEKNIYI 202
+CP +S FDL+TG + W P PV+ L +S+ L I+P + + + +
Sbjct: 62 ICPFHKSEFDLKTGEAKCWSPWPPVVGNLLGKISSRKNLKIYPTQIENGQVLV 114
>gi|425467383|ref|ZP_18846666.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
gi|389829881|emb|CCI28473.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
Length = 116
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W V+ + +L G R+V+ +ILL+ + A+ NR P + ++T+D
Sbjct: 2 SWTKVLSVDSLAPGARQVVKVGDSSILLINNNGQFHAVGNRCPH---LKLSMTKGQITED 58
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALS---TLYIFPVKTDEKNIYI 202
G IVCP S+FDL +GAV+DW PV+ A+S L ++P++ ++ +I+I
Sbjct: 59 GAIVCPWHRSSFDLCSGAVKDWITWPPVVNKAMAAVSQPQALPVYPLRIEDGSIWI 114
>gi|166365550|ref|YP_001657823.1| hypothetical protein MAE_28090 [Microcystis aeruginosa NIES-843]
gi|166087923|dbj|BAG02631.1| hypothetical protein MAE_28090 [Microcystis aeruginosa NIES-843]
Length = 116
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W V+ + +L G R+V+ +ILL+ + A+ NR P + ++T+D
Sbjct: 2 SWTKVLSVDSLAPGARQVVKVGENSILLINNNGQFHAVGNRCPH---LKLSMTKGQITED 58
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALS---TLYIFPVKTDEKNIYI 202
G IVCP S+FDL +GAV+DW PV+ A+S L ++P++ ++ +I+I
Sbjct: 59 GAIVCPWHRSSFDLCSGAVKDWITWPPVVNKAMAAVSQPQALPVYPLRIEDGSIWI 114
>gi|16329978|ref|NP_440706.1| ferredoxin component [Synechocystis sp. PCC 6803]
gi|451814137|ref|YP_007450589.1| ferredoxin component [Synechocystis sp. PCC 6803]
gi|1652464|dbj|BAA17386.1| ferredoxin component [Synechocystis sp. PCC 6803]
gi|407957871|dbj|BAM51111.1| ferredoxin component [Synechocystis sp. PCC 6803]
gi|451780106|gb|AGF51075.1| ferredoxin component [Synechocystis sp. PCC 6803]
Length = 164
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDG 150
W + S LP G R+V+ + + ILLL + A+ N+ P + + + + +DG
Sbjct: 50 WTKALAQSELPPGSRQVVKVNQQAILLLNEGGTIHAVSNQCP----HLKLPMKSGKIKDG 105
Query: 151 CIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALST---LYIFPVKTDEKNIYIRM 204
IVCP S FDL +GAV++W P PV+ L +S L +FPV+ + + + +
Sbjct: 106 AIVCPFHRSAFDLCSGAVQEWSPFPPVVGGLMGKMSAEKPLPVFPVRVENGEVQVDL 162
>gi|383321721|ref|YP_005382574.1| Rieske (2Fe-2S) domain-containing protein [Synechocystis sp. PCC
6803 substr. GT-I]
gi|383324890|ref|YP_005385743.1| Rieske (2Fe-2S) domain-containing protein [Synechocystis sp. PCC
6803 substr. PCC-P]
gi|383490774|ref|YP_005408450.1| Rieske (2Fe-2S) domain-containing protein [Synechocystis sp. PCC
6803 substr. PCC-N]
gi|384436041|ref|YP_005650765.1| Rieske (2Fe-2S) domain-containing protein [Synechocystis sp. PCC
6803]
gi|339273073|dbj|BAK49560.1| Rieske (2Fe-2S) domain protein [Synechocystis sp. PCC 6803]
gi|359271040|dbj|BAL28559.1| Rieske (2Fe-2S) domain protein [Synechocystis sp. PCC 6803 substr.
GT-I]
gi|359274210|dbj|BAL31728.1| Rieske (2Fe-2S) domain protein [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|359277380|dbj|BAL34897.1| Rieske (2Fe-2S) domain protein [Synechocystis sp. PCC 6803 substr.
PCC-P]
Length = 117
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDG 150
W + S LP G R+V+ + + ILLL + A+ N+ P + + + + +DG
Sbjct: 3 WTKALAQSELPPGSRQVVKVNQQAILLLNEGGTIHAVSNQCP----HLKLPMKSGKIKDG 58
Query: 151 CIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALST---LYIFPVKTDEKNIYIRM 204
IVCP S FDL +GAV++W P PV+ L +S L +FPV+ + + + +
Sbjct: 59 AIVCPFHRSAFDLCSGAVQEWSPFPPVVGGLMGKMSAEKPLPVFPVRVENGEVQVDL 115
>gi|186683830|ref|YP_001867026.1| Rieske (2Fe-2S) domain-containing protein [Nostoc punctiforme PCC
73102]
gi|186466282|gb|ACC82083.1| Rieske (2Fe-2S) domain protein [Nostoc punctiforme PCC 73102]
Length = 119
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 6/119 (5%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W V+ + AL G R V+ IL+L ++++++A++N P L + K+T+
Sbjct: 2 SWTKVLAVEALSPGTREVVKVGNRKILVLNHENQLYAVDNNCPH---LKLPLKSGKITES 58
Query: 150 GCIVCPTTESTFDLRTGAVRDWY---PNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
G IVC S FDLRTG V+ W P + +L TL +FP++ +E +I++ ++
Sbjct: 59 GAIVCTFHRSAFDLRTGEVQGWCSWPPGVGKVLSLVSQPKTLPVFPIRVEEGSIWVDVQ 117
>gi|425457680|ref|ZP_18837378.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
gi|389800900|emb|CCI19863.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
Length = 116
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 6/116 (5%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W V+ + +L G R+V+ +ILL+ + A+ N P + K+T+D
Sbjct: 2 SWTKVLSVDSLAPGARQVVKVGENSILLINNNGQFHAVGNLCPH---LKLSMTKGKITED 58
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALS---TLYIFPVKTDEKNIYI 202
G IVCP S+FDL +GAV+DW PV+ A+S L ++P++ ++ +I+I
Sbjct: 59 GAIVCPWHRSSFDLCSGAVKDWITWPPVVNKAMAAVSQPQALPVYPLRIEDGSIWI 114
>gi|425446541|ref|ZP_18826544.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
gi|389733179|emb|CCI03023.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
Length = 116
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 6/116 (5%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W V+ + +L G R+V+ +ILL+ + A+ N P + K+T+D
Sbjct: 2 SWTKVLSVDSLAPGARQVVKVGENSILLINNNGQFHAVGNLCPH---LKLSMTKGKITKD 58
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALS---TLYIFPVKTDEKNIYI 202
G IVCP S+FDL +GAV+DW PV+ A+S L ++P++ ++ +I+I
Sbjct: 59 GAIVCPWHRSSFDLCSGAVKDWITWPPVVNKAMAAVSQPQALPVYPLRIEDGSIWI 114
>gi|440680443|ref|YP_007155238.1| Rieske (2Fe-2S) iron-sulfur domain protein [Anabaena cylindrica PCC
7122]
gi|428677562|gb|AFZ56328.1| Rieske (2Fe-2S) iron-sulfur domain protein [Anabaena cylindrica PCC
7122]
Length = 117
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 62/115 (53%), Gaps = 7/115 (6%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDG 150
W ++ +AL G R V+ + IL+L +++ ++A+EN P + + + + +DG
Sbjct: 3 WTKILAANALAPGAREVVKVGNKNILVLNHENNLYAVENNCP----HLKLPLKSGKIKDG 58
Query: 151 CIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALS---TLYIFPVKTDEKNIYI 202
IVC S FDL TG V+ W P P + L +S TL +FPV+ ++ NI +
Sbjct: 59 AIVCSFHRSAFDLSTGEVKTWCPWPPGVGKLLSMVSEAKTLPVFPVRVEDGNILV 113
>gi|298492629|ref|YP_003722806.1| Rieske (2Fe-2S) domain-containing protein ['Nostoc azollae' 0708]
gi|298234547|gb|ADI65683.1| Rieske (2Fe-2S) iron-sulfur domain protein ['Nostoc azollae' 0708]
Length = 118
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 63/115 (54%), Gaps = 7/115 (6%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDG 150
W ++ +AL G R+V+ + IL++ ++++++A+EN P + + + +DG
Sbjct: 3 WTKILAENALDSGARQVVKVGNKNILVVNHENQLYAVENNCP----HLKLPLKPGKIEDG 58
Query: 151 CIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALS---TLYIFPVKTDEKNIYI 202
IVC S FDL TG V+ W P P + L +S TL +FPV+ ++ NI I
Sbjct: 59 GIVCSFHRSAFDLNTGEVKTWCPWPPGVGKLLSMVSQEKTLPVFPVRVEDGNILI 113
>gi|354567634|ref|ZP_08986802.1| Rieske (2Fe-2S) iron-sulfur domain protein [Fischerella sp. JSC-11]
gi|353542092|gb|EHC11556.1| Rieske (2Fe-2S) iron-sulfur domain protein [Fischerella sp. JSC-11]
Length = 117
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W V+ L G R V+ ILLL ++ +V+A++N P L K+ D
Sbjct: 2 SWTKVLAADTLFPGAREVVKVGSRKILLLNHEGQVYAVDNACPH---LKLSLKKGKIV-D 57
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALS---TLYIFPVKTDEKNIYI 202
G IVCP S FDL TG V+DW PV+ +S TL ++PV+ ++ +I++
Sbjct: 58 GAIVCPWHRSAFDLCTGEVKDWITWPPVVSKAMSVVSQEKTLPVYPVRVEDGSIWV 113
>gi|427715725|ref|YP_007063719.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Calothrix
sp. PCC 7507]
gi|427348161|gb|AFY30885.1| Rieske (2Fe-2S) iron-sulfur domain protein [Calothrix sp. PCC 7507]
Length = 116
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 60/118 (50%), Gaps = 6/118 (5%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+WV V+ LP ER+V+ + ILL+ + +++A+EN P L K+T
Sbjct: 2 SWVKVLSQDELPPNERKVVKVEQRNILLVRHNSQIYALENSCP---HMKLPLNKGKITDK 58
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALS---TLYIFPVKTDEKNIYIRM 204
G IVCP S FDL TG +W P + + +S L +FP + +E +I++ +
Sbjct: 59 GEIVCPFHRSAFDLATGNPTEWITFPPGVNKVLGLISKEKALPVFPTRVEEGSIWVEL 116
>gi|434402754|ref|YP_007145639.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Cylindrospermum stagnale PCC 7417]
gi|428257009|gb|AFZ22959.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Cylindrospermum stagnale PCC 7417]
Length = 116
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 65/118 (55%), Gaps = 6/118 (5%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W V+ AL G R+V+ ILLL ++++++A+++ P + AK+ ++
Sbjct: 2 SWTKVLAADALSSGGRQVVKVGDRNILLLNHENKLYAVDSICPH---LKLPIKKAKINEE 58
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALS---TLYIFPVKTDEKNIYIRM 204
G IVC S FD+ TG V+ W P P + L +S +L +FP++ +E +I+I +
Sbjct: 59 GAIVCSFHRSAFDIGTGEVKAWCPWPPGVGKLLSMVSEAKSLPVFPIRVEEGSIWIDL 116
>gi|270158475|ref|ZP_06187132.1| Rieske (2Fe-2S) domain protein [Legionella longbeachae D-4968]
gi|289166691|ref|YP_003456829.1| dioxygenase, ferredoxin subunit [Legionella longbeachae NSW150]
gi|269990500|gb|EEZ96754.1| Rieske (2Fe-2S) domain protein [Legionella longbeachae D-4968]
gi|288859864|emb|CBJ13850.1| putative dioxygenase, ferredoxin subunit [Legionella longbeachae
NSW150]
Length = 117
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 54/116 (46%), Gaps = 6/116 (5%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W + L L + R DG ILL+W+ D V AI ++ P + L +T +
Sbjct: 2 SWKQTITLEQLQQKGRHCETIDGHKILLIWHNDAVHAIASQCP---HFKLPLTKGVVTDE 58
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALS---TLYIFPVKTDEKNIYI 202
IVCP +S F+L TG W P P L + LS L I+PV+ D I +
Sbjct: 59 NTIVCPFHKSAFNLTTGQPECWSPWPPALGTVLGKLSKPKNLKIYPVRIDNDKIIV 114
>gi|328951404|ref|YP_004368739.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Marinithermus hydrothermalis DSM 14884]
gi|328451728|gb|AEB12629.1| Rieske (2Fe-2S) iron-sulfur domain protein [Marinithermus
hydrothermalis DSM 14884]
Length = 106
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 18/117 (15%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLTQ 148
NWV V L AL R + DG ++L+LWY+ +V+AIE+R + +G +EG + A
Sbjct: 2 NWVQVTTLEALKAQGRTRLELDGRSVLVLWYEGQVYAIEDRCTHDDGPLAEGEVEA---- 57
Query: 149 DGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
G I+CP + FDL TG R PA + ++ K ++ +++ E
Sbjct: 58 -GKIICPRHGARFDLATG------------RGTLPAPKPVRVYQTKVEDGQVFVGYE 101
>gi|427707784|ref|YP_007050161.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Nostoc sp.
PCC 7107]
gi|427360289|gb|AFY43011.1| Rieske (2Fe-2S) iron-sulfur domain protein [Nostoc sp. PCC 7107]
Length = 118
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 7/115 (6%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDG 150
W V+ AL G R V+ ILLL ++++++A++N P L N K+ + G
Sbjct: 3 WTKVLAADALAPGAREVVNVGKRKILLLNHENQLYAVDNACPH---LKLPLKNGKI-EGG 58
Query: 151 CIVCPTTESTFDLRTGAVRDWYPNNP---VLRALTPALSTLYIFPVKTDEKNIYI 202
I+CP S F+L G V +W P P + +L TL +FP++ +E +I+I
Sbjct: 59 AIICPIHRSAFNLSNGQVNNWCPWPPGVGKVLSLISQQKTLPVFPIRVEEGSIWI 113
>gi|255077940|ref|XP_002502550.1| rieske ferredoxin [Micromonas sp. RCC299]
gi|226517815|gb|ACO63808.1| rieske ferredoxin [Micromonas sp. RCC299]
Length = 379
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 103 GERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEG---LINAKLTQDGCIVCPTTES 159
G R V DG+ IL+ + +V+A+ N+ P +G L++AKLT DGCIVCP S
Sbjct: 101 GGRLVANLDGKKILIQEFMGDVYAVSNKCPHLNLSMQGKTALLSAKLTDDGCIVCPAHGS 160
Query: 160 TFDLRTG-AVRDWYPNNPVL 178
F L G V +W PN P L
Sbjct: 161 QFKLDNGEQVGEWCPNLPDL 180
>gi|110741342|dbj|BAF02221.1| hypothetical protein [Arabidopsis thaliana]
Length = 51
Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/50 (78%), Positives = 43/50 (86%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFLDFIYSVAGAL 296
FGF +E+INGKAA IGFLLLLDFELLTGKGLLKGTGFLDF+YS + A
Sbjct: 1 FGFTKKNEVINGKAAVIGFLLLLDFELLTGKGLLKGTGFLDFLYSASDAF 50
>gi|299473035|emb|CBN77428.1| ferredoxin component [Ectocarpus siliculosus]
Length = 194
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 59/122 (48%), Gaps = 13/122 (10%)
Query: 89 ENWVPVVPLSALPKGERRVIIQDGETILLLW-YKDEVFAIENRSPAEGA-YSEGLINAKL 146
E WVPV+ S + GE + QDG+ +L+ K ++A N P G +G INA
Sbjct: 48 EEWVPVLKTSDIAPGELVGVTQDGQELLIAADLKGSIYATANICPHLGTPLDQGSINAA- 106
Query: 147 TQDGCIVCPTTESTFDLRTGA-VRDWYPNNPVLRALT-----PALSTLYIFPVKTDEKNI 200
G +VCP +S F L G V DW P PVL L PA L +FPV+ NI
Sbjct: 107 ---GALVCPLHKSAFSLEDGKLVGDWCPFPPVLGPLVLGRLEPA-KDLAVFPVRASGGNI 162
Query: 201 YI 202
+
Sbjct: 163 QV 164
>gi|443326801|ref|ZP_21055443.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Xenococcus sp. PCC 7305]
gi|442793594|gb|ELS03039.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Xenococcus sp. PCC 7305]
Length = 116
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 6/118 (5%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W V+ L G+R+V+ + IL++ E+ A+ N P + KLT+D
Sbjct: 2 SWTKVLTADELSSGDRKVVKVGDQKILIINSNGELHAVNNACPHLKLPLK---KGKLTED 58
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALST---LYIFPVKTDEKNIYIRM 204
G IVCP S FDL TG V +W P PV+ + +S+ L IF + ++ +I++ +
Sbjct: 59 GAIVCPFHRSAFDLCTGEVTNWTPWPPVVGNVLGKISSEQKLSIFATRVEDGSIWVDV 116
>gi|421483169|ref|ZP_15930746.1| 2-hydroxybenzoate 5-hydroxylase ferredoxin [Achromobacter
piechaudii HLE]
gi|400198413|gb|EJO31372.1| 2-hydroxybenzoate 5-hydroxylase ferredoxin [Achromobacter
piechaudii HLE]
Length = 104
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 16/118 (13%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKD-EVFAIENRSPAEGAYSEGLINAKLTQ 148
NW+ + L + + ++ GE L L+ + E FA +N ++ L++ +
Sbjct: 2 NWIRIASTDQLTDDDEVIPVEAGEKQLALYRSEGEFFASDNVC----THAYALLSDGFLE 57
Query: 149 DGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEG 206
DGCI CP ++ FD+RTG PA S + ++PVK + ++IY ++G
Sbjct: 58 DGCIECPLHQARFDIRTGQA-----------MCAPATSGIRVYPVKVEGQDIYADVQG 104
>gi|32401294|gb|AAP80819.1| ferredoxin component [Griffithsia japonica]
Length = 180
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 67/128 (52%), Gaps = 10/128 (7%)
Query: 89 ENWVPVVPLSALPKGERRVIIQDGETILLLW-YKDEVFAIENRSPAEGA-YSEGLINAKL 146
E WVP++ + + GE + ++ + +L+ Y +V+A N P G ++G +
Sbjct: 44 EAWVPLIETNDITPGELKGVVAAQQQVLVACDYDGQVYASANVCPHLGTPLTDGEV---- 99
Query: 147 TQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALST---LYIFPVKTDEKNIYIR 203
DG +VC +S+FDL TGAV++W P++ L ALST L ++ V+ + I
Sbjct: 100 -ADGVLVCTQHKSSFDLTTGAVKEWCTFPPLIGPLLGALSTPCDLPVYAVRDNAGTIEAL 158
Query: 204 MEGGASSD 211
++ A SD
Sbjct: 159 LDVEARSD 166
>gi|428298338|ref|YP_007136644.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Calothrix
sp. PCC 6303]
gi|428234882|gb|AFZ00672.1| Rieske (2Fe-2S) iron-sulfur domain protein [Calothrix sp. PCC 6303]
Length = 116
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 61/118 (51%), Gaps = 6/118 (5%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W V+ LP R+V+ + ILLL +K++++A++N P + K+T +
Sbjct: 2 SWTKVLSQDELPLDARKVVKVEQRAILLLNHKNKIYAVDNICP---HLKLPMNKGKVTDN 58
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALS---TLYIFPVKTDEKNIYIRM 204
I+CP S F L TG V +W P P + + +S L +FP + +E +I++ +
Sbjct: 59 EEIICPFHRSCFKLDTGNVVEWTPFPPGVGKVLGMISKEKQLPVFPTRIEEGSIWVEV 116
>gi|414077664|ref|YP_006996982.1| Rieske (2Fe-2S) domain-containing protein [Anabaena sp. 90]
gi|413971080|gb|AFW95169.1| Rieske (2Fe-2S) domain-containing protein [Anabaena sp. 90]
Length = 115
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 62/116 (53%), Gaps = 9/116 (7%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPA-EGAYSEGLINAKLTQD 149
W V+ +AL G R V+ ILLL ++++++A+++ P + + +G I +D
Sbjct: 3 WTQVLAANALAAGAREVVKVGDRKILLLNHENQLYAVDDTCPHLKMSLKKGKI-----ED 57
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALS---TLYIFPVKTDEKNIYI 202
G IVCP S FDL G V+ W P PV+ L +S TL +P+K + NI I
Sbjct: 58 GAIVCPFHRSAFDLGNGEVKTWCPFPPVVGKLLSMVSSEKTLPTYPLKVEAGNILI 113
>gi|384440331|ref|YP_005655055.1| Initial dioxygenase ferredoxin subunit [Thermus sp. CCB_US3_UF1]
gi|359291464|gb|AEV16981.1| Initial dioxygenase ferredoxin subunit [Thermus sp. CCB_US3_UF1]
Length = 100
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 21/117 (17%)
Query: 91 WVPVVPLSALPKGERRVIIQDGET---ILLLWYKDEVFAIENRSPAEGAYSEGLINAKLT 147
W PV L+ L G R++++ E ILLL+ +EVFA+E+ P + +G ++
Sbjct: 2 WTPVAKLNELQGG--RLVVRRPEHRRPILLLYTGEEVFALEDLCP----HDDGPLHEGEL 55
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
++G +VCP + FDLRTG R PA + +FP K + IY+ +
Sbjct: 56 EEGQMVCPRHGARFDLRTG------------RQTLPAPRPVRVFPAKLEGDTIYLDL 100
>gi|412988763|emb|CCO15354.1| predicted protein [Bathycoccus prasinos]
Length = 398
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 72/141 (51%), Gaps = 20/141 (14%)
Query: 77 EESSASGGGGGGENWVPV-VPLSALPKG--ERRVIIQDGETILLLWYKDEVFAIENRSPA 133
E ++ S G + + P V +S L + +RRV+ +G+ +LL ++ DE++ + N+ P
Sbjct: 248 ETTTKSTEKGNEKEYYPTGVTVSELKQSDKQRRVVEVNGKKVLLQYFMDELYCVSNKCPH 307
Query: 134 EGAYSEG---LINAKL-------TQDGCIVCPTTESTFDLRTGAVR-DWYPN-----NPV 177
G +G L++A L ++ CIVCP ++ FD+ +G V +W P P+
Sbjct: 308 LGISMQGKTALLSAGLEAPKREGSKAPCIVCPAHQTAFDMESGEVEGEWCPKLIGKGVPI 367
Query: 178 L-RALTPALSTLYIFPVKTDE 197
L +AL + +F + +E
Sbjct: 368 LGKALEKERKPIEVFKTRVEE 388
>gi|311105654|ref|YP_003978507.1| 2-hydroxybenzoate 5-hydroxylase ferredoxin [Achromobacter
xylosoxidans A8]
gi|310760343|gb|ADP15792.1| 2-hydroxybenzoate 5-hydroxylase ferredoxin 2 [Achromobacter
xylosoxidans A8]
Length = 104
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 16/118 (13%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKD-EVFAIENRSPAEGAYSEGLINAKLTQ 148
NW+ + L + + + GE L L+ + E +A +N ++ L++ +
Sbjct: 2 NWIRIASTDQLTDDDEVIPVAAGEKQLALYRSEGEFYASDNVC----THAYALLSDGYLE 57
Query: 149 DGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEG 206
DGCI CP ++ FD+RTG PA S + ++PVK + ++IY ++G
Sbjct: 58 DGCIECPLHQARFDIRTGQA-----------MCAPATSGIRVYPVKVEGQDIYANLQG 104
>gi|410696125|gb|AFV75193.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Thermus oshimai JL-2]
Length = 100
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 21/117 (17%)
Query: 91 WVPVVPLSALPKGERRVIIQDGET---ILLLWYKDEVFAIENRSPAEGAYSEGLINAKLT 147
W PV LS +G R++++ E ILLL +EVFA+E+ + +G ++
Sbjct: 2 WTPVARLSEFREG--RLVVRRPEHKRPILLLHTGEEVFALEDLC----THDDGPLHEGEV 55
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
++G IVCP + FDLRTG R PA + +FPV+ + + +Y+ +
Sbjct: 56 EEGAIVCPRHGARFDLRTG------------RGTLPAPRPVKVFPVRVEGEVVYLDL 100
>gi|320449479|ref|YP_004201575.1| ferredoxin subunit of phenylpropionate dioxygenase [Thermus
scotoductus SA-01]
gi|320149648|gb|ADW21026.1| ferredoxin subunit of phenylpropionate dioxygenase [Thermus
scotoductus SA-01]
Length = 100
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 21/117 (17%)
Query: 91 WVPVVPLSALPKGERRVIIQDGET---ILLLWYKDEVFAIENRSPAEGAYSEGLINAKLT 147
W PV LS L G R++++ E ILLL+ +EVFA+E+ + +G ++
Sbjct: 2 WTPVAKLSELENG--RLVVKRPEHRKPILLLYTGEEVFALEDIC----THDDGPLHEGDV 55
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
+DG IVCP + FDL+TG R PA + +FP K + I + +
Sbjct: 56 EDGQIVCPRHGARFDLKTG------------RQTLPAPRPVKVFPAKLEGDTILLDL 100
>gi|238061065|ref|ZP_04605774.1| nitrite reductase (NAD(P)H), small subunit [Micromonospora sp. ATCC
39149]
gi|237882876|gb|EEP71704.1| nitrite reductase (NAD(P)H), small subunit [Micromonospora sp. ATCC
39149]
Length = 125
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAY--SEGLINAKLT 147
+WVPV PL L + DG + L DE+FA++N P GAY S G++ ++
Sbjct: 18 DWVPVCPLDRLEPERGVAALVDGAQVALFRTGDELFALDNLDPVGGAYVLSRGIVGSR-G 76
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLR 179
+ P + +DLRTGA D P VLR
Sbjct: 77 GTPTVASPLHKQVYDLRTGACLD-LPGVAVLR 107
>gi|282898814|ref|ZP_06306801.1| Rieske (2Fe-2S) region protein [Cylindrospermopsis raciborskii
CS-505]
gi|281196341|gb|EFA71251.1| Rieske (2Fe-2S) region protein [Cylindrospermopsis raciborskii
CS-505]
Length = 117
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 7/115 (6%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDG 150
W ++ S L G R V+ IL+L + ++ +A+EN P + + + + ++G
Sbjct: 3 WQKILATSDLLPGGREVLRVGKRNILVLNHDNQYYAVENSCP----HLKVPMKSAKIENG 58
Query: 151 CIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALS---TLYIFPVKTDEKNIYI 202
IVC S FDL TG V+ W P P + L +S L +FP++ + ++ I
Sbjct: 59 TIVCSFHRSAFDLATGEVKTWCPWPPAVGKLMGMVSQQKNLPVFPLRVENDHVLI 113
>gi|289208753|ref|YP_003460819.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Thioalkalivibrio sp. K90mix]
gi|288944384|gb|ADC72083.1| Rieske (2Fe-2S) iron-sulphur domain protein [Thioalkalivibrio sp.
K90mix]
Length = 107
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
W+ V P+ ++ GE R++ G + + E FA+EN + E I D
Sbjct: 3 EWIDVAPVDSIADGEHRLVDTAGTEVAIFNLDGEFFAVENLC----THEEVPIADGELDD 58
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLR 179
CI CP E+ F LRTG V + +P+ R
Sbjct: 59 DCITCPLHEAQFCLRTGEVMEPPAEDPLTR 88
>gi|293604836|ref|ZP_06687233.1| naphthalene 1,2-dioxygenase system ferredoxin subunit
[Achromobacter piechaudii ATCC 43553]
gi|292816664|gb|EFF75748.1| naphthalene 1,2-dioxygenase system ferredoxin subunit
[Achromobacter piechaudii ATCC 43553]
Length = 104
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 16/118 (13%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKD-EVFAIENRSPAEGAYSEGLINAKLTQ 148
NW+ + L + + + GE L L+ + E FA +N ++ L++ +
Sbjct: 2 NWIRIASTDQLTDDDEVIPVAAGEKQLALYRSEGEFFASDNVC----THAYALLSDGYLE 57
Query: 149 DGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEG 206
DGCI CP ++ FD+RTG PA + + ++PVK + ++IY ++
Sbjct: 58 DGCIECPLHQARFDIRTGQA-----------MCAPATTGIRVYPVKVEGQDIYADVQA 104
>gi|218294671|ref|ZP_03495525.1| Rieske (2Fe-2S) domain protein [Thermus aquaticus Y51MC23]
gi|218244579|gb|EED11103.1| Rieske (2Fe-2S) domain protein [Thermus aquaticus Y51MC23]
Length = 100
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 21/117 (17%)
Query: 91 WVPVVPLSALPKGERRVIIQDGET---ILLLWYKDEVFAIENRSPAEGAYSEGLINAKLT 147
W PV L G R++I+ E ILLL+ +EVFA+E+ +G G ++
Sbjct: 2 WTPVANLEEFKDG--RLVIRRPEHRRPILLLYTGEEVFALEDLCTHDG----GPLHEGEV 55
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
++G IVCP + FDLRTG R PA L +FP + + + + + +
Sbjct: 56 EEGAIVCPRHGARFDLRTG------------RQTLPAPRPLKVFPARLEGETVLLDL 100
>gi|91778987|ref|YP_554195.1| anthranilate dioxygenase ferredoxin reductase AndAb [Burkholderia
xenovorans LB400]
gi|91691647|gb|ABE34845.1| Anthranilate dioxygenase ferredoxin reductase(AndAb) [Burkholderia
xenovorans LB400]
Length = 107
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 17/118 (14%)
Query: 89 ENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLT 147
+NW P+ L +GE II I + DEVFA+ + S S+G +
Sbjct: 6 DNWQPIGTLDDFAEGEPAAIIAGDRKIAVFRLGDEVFALNDLCSHGHARLSDGYV----- 60
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
+DGC+ CP + D+RTGA R P + FP++ + + I ++
Sbjct: 61 EDGCVECPLHQGLIDIRTGAPR-----------CAPVTEPVRAFPIRIVDSRVEIHVD 107
>gi|46199792|ref|YP_005459.1| initial dioxygenase ferredoxin subunit [Thermus thermophilus HB27]
gi|55981810|ref|YP_145107.1| dioxygenase ferredoxin subunit [Thermus thermophilus HB8]
gi|384432019|ref|YP_005641379.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Thermus
thermophilus SG0.5JP17-16]
gi|386361341|ref|YP_006059586.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Thermus thermophilus JL-18]
gi|46197419|gb|AAS81832.1| initial dioxygenase ferredoxin subunit [Thermus thermophilus HB27]
gi|55773223|dbj|BAD71664.1| putative dioxygenase ferredoxin subunit [Thermus thermophilus HB8]
gi|333967487|gb|AEG34252.1| Rieske (2Fe-2S) iron-sulfur domain protein [Thermus thermophilus
SG0.5JP17-16]
gi|383510368|gb|AFH39800.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Thermus thermophilus JL-18]
Length = 100
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 21/117 (17%)
Query: 91 WVPVVPLSALPKGERRVIIQDGET---ILLLWYKDEVFAIENRSPAEGAYSEGLINAKLT 147
W PV L G R++++ E ILLL+ +EVFA+E+ + +G ++
Sbjct: 2 WTPVAKLGEFQNG--RLVVKRPEHRKPILLLYTGEEVFALEDVC----THDDGPLHEGEV 55
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
+DG IVCP + FDLRTG R PA + +FP + + + + +
Sbjct: 56 EDGAIVCPRHGARFDLRTG------------RQTLPAPRPVKVFPARLEGDTVLLDL 100
>gi|443477716|ref|ZP_21067541.1| Chlorophyll A-B binding protein [Pseudanabaena biceps PCC 7429]
gi|443017110|gb|ELS31629.1| Chlorophyll A-B binding protein [Pseudanabaena biceps PCC 7429]
Length = 76
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 235 EVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
E +M VD+ + FG +ELING+ A +GF+ L+ EL+TGKGLL+ GF
Sbjct: 26 EPKMYVDQGDDRFGLTEYAELINGRLAMVGFVGLVVIELVTGKGLLQIIGF 76
>gi|282896927|ref|ZP_06304933.1| Rieske (2Fe-2S) region protein [Raphidiopsis brookii D9]
gi|281198336|gb|EFA73226.1| Rieske (2Fe-2S) region protein [Raphidiopsis brookii D9]
Length = 117
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 7/115 (6%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDG 150
W ++ S L G R V+ IL+L + ++ +A+EN P + + + + ++
Sbjct: 3 WQKILATSDLLPGGREVVKVGKRNILVLNHDNQYYAVENSCP----HLKVPMKSAKIENS 58
Query: 151 CIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALS---TLYIFPVKTDEKNIYI 202
IVC S FDL TG V+ W P P + L +S L +FP++ + ++ I
Sbjct: 59 TIVCSFHRSAFDLATGEVKTWCPWPPAVGKLMGMVSQQKNLPVFPLRVENDHVLI 113
>gi|291612631|ref|YP_003522788.1| nitrite reductase (NAD(P)H), small subunit [Sideroxydans
lithotrophicus ES-1]
gi|291582743|gb|ADE10401.1| nitrite reductase (NAD(P)H), small subunit [Sideroxydans
lithotrophicus ES-1]
Length = 108
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 19/121 (15%)
Query: 90 NWVPVVPLSALPKGERRVI-IQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
NW+ V L +P+ RVI GE L D+VFA+ NR P +G ++G+++ K
Sbjct: 2 NWIQVGTLEDIPRQGSRVINTAHGEIALFRSKDDQVFALNNRCPHKGGPLAQGIVHGKR- 60
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEGG 207
+ CP DL +G+ A+ P + + V+ + +++ +E G
Sbjct: 61 ----VTCPLHNWVIDLESGS------------AIAPDVGCAHRHEVRVAHEVLFLALEAG 104
Query: 208 A 208
A
Sbjct: 105 A 105
>gi|448726388|ref|ZP_21708793.1| ferredoxin domain-containing protein [Halococcus morrhuae DSM 1307]
gi|445795042|gb|EMA45578.1| ferredoxin domain-containing protein [Halococcus morrhuae DSM 1307]
Length = 581
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 69/160 (43%), Gaps = 21/160 (13%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLTQD 149
+V V LS L R+V+ DG I L ++ EV+A++NR P G + G + +D
Sbjct: 8 YVQVASLSELEDEGRQVVSSDGRPIALFHHEGEVYAVDNRCPHMGFPLTRGTV-----ED 62
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEGGAS 209
G + C + F+L G D + ++ + FP D+ +Y+ +
Sbjct: 63 GILTCHWHHARFELEEGDTFDLFADD------------VQTFPTAIDDGEVYLDPDPEPD 110
Query: 210 SDASAEIVFSGKAQPGVTATDVNIEEVRMVVDEDLEGFGF 249
+ F + G+ D+++ + V+ D EG GF
Sbjct: 111 VPPATR--FRNRLADGLE-EDISLVMAKSVIGLDEEGKGF 147
>gi|451981785|ref|ZP_21930130.1| putative Rieske-type ferredoxin [Nitrospina gracilis 3/211]
gi|451760995|emb|CCQ91395.1| putative Rieske-type ferredoxin [Nitrospina gracilis 3/211]
Length = 138
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 18/116 (15%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLTQD 149
++ V+ LP G+ ++ + I L YK + FA+ N+ P +GA EG I ++
Sbjct: 4 YIKVMKDGDLPPGKSAIVTVRDQEIALFNYKGKYFAVSNKCPHKGAPLGEGRI-----EE 58
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
G I+CP E F L TG P NP L+ +FPV+ + + I ++
Sbjct: 59 GVIICPNHEWRFSLETGGC----PQNPELKTT--------VFPVRVHKGVVRIGID 102
>gi|425746987|ref|ZP_18865007.1| putative nitrite reductase [NAD(P)H], small subunit [Acinetobacter
baumannii WC-323]
gi|425484414|gb|EKU50818.1| putative nitrite reductase [NAD(P)H], small subunit [Acinetobacter
baumannii WC-323]
Length = 101
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 15/115 (13%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W+ V + + E + I DG+ I + + D FAIEN P ++ L+ +D
Sbjct: 2 SWISVCQQDDITEDEPKAIEVDGKKIGVFFIDDNYFAIENVCP----HAYALLTEGFIED 57
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
+ CP E+ FD++TG ++ P L +PV+ + +++ I++
Sbjct: 58 QTVECPLHEAIFDIQTGELKS-----------GPGCRDLCTYPVRVEGQDVQIQL 101
>gi|408373252|ref|ZP_11170950.1| dioxygenase ferredoxin reductase component [Alcanivorax
hongdengensis A-11-3]
gi|407767090|gb|EKF75529.1| dioxygenase ferredoxin reductase component [Alcanivorax
hongdengensis A-11-3]
Length = 114
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
Query: 98 SALPKGERRVIIQDGETILLLWY-KDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPT 156
S +P+G+ + I Q G+T L++++ D +A + R A L K+ +D C+ CP
Sbjct: 9 SDIPQGKSKAI-QAGDTKLVVYHLSDGFYATQARCTHMFA---SLGKGKIIEDKCVQCPL 64
Query: 157 TESTFDLRTGAVRDW--YPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
+ FD+RTG V +W +P L + L +PV ++ +++ +
Sbjct: 65 HRARFDIRTGEVSEWANFPPGVQLLNVVRGEKALQTWPVSEEDGRLFVEL 114
>gi|339629574|ref|YP_004721217.1| Rieske (2Fe-2S) domain-containing protein [Sulfobacillus
acidophilus TPY]
gi|379007307|ref|YP_005256758.1| rieske (2Fe-2S) iron-sulfur domain-containing protein
[Sulfobacillus acidophilus DSM 10332]
gi|339287363|gb|AEJ41474.1| Rieske (2Fe-2S) iron-sulfur domain protein [Sulfobacillus
acidophilus TPY]
gi|361053569|gb|AEW05086.1| Rieske (2Fe-2S) iron-sulfur domain protein [Sulfobacillus
acidophilus DSM 10332]
Length = 102
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 19/117 (16%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLTQD 149
W PV + +G+ +++ + I L +DE+FA E+ S AE + SEG Q
Sbjct: 3 WQPVAQADEIREGQPVLVVVGEDDIALYRVQDEIFATEDLCSHAEASLSEG------DQH 56
Query: 150 GCIV-CPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
G I+ CP FD+RTG + + PA+S + +PVK + ++I ++
Sbjct: 57 GYIIECPRHGGRFDIRTGKAKHF-----------PAVSPIRTYPVKIENGTVFIAVD 102
>gi|374311829|ref|YP_005058259.1| ferredoxin--NAD(+) reductase [Granulicella mallensis MP5ACTX8]
gi|358753839|gb|AEU37229.1| Ferredoxin--NAD(+) reductase [Granulicella mallensis MP5ACTX8]
Length = 495
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 77/151 (50%), Gaps = 35/151 (23%)
Query: 92 VPVVPLSALPKGERRVIIQDGET-ILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLTQD 149
+ V+ S LP G ++ + + GET ILL+ Y++ + A++++ P GA EG I +
Sbjct: 4 IRVMNTSELPCGHKKTV-KLGETEILLIHYEEGLVAVQSQCPHAGAPLKEGAIC-----N 57
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEGGAS 209
G +VCP TF+L TGA+ + P + +L ++PV R+EGG
Sbjct: 58 GRLVCPWHMGTFELSTGALVE-----------PPPMESLKMYPV---------RVEGG-- 95
Query: 210 SDASAEIVFSGKAQPGVTATDVNIEEVRMVV 240
EI+ + + P T+T V EE+ ++V
Sbjct: 96 -----EILVNPEPLPTATSTPVQKEELVLLV 121
>gi|255600927|ref|XP_002537567.1| Naphthalene 1,2-dioxygenase system ferredoxin subunit, putative
[Ricinus communis]
gi|223515898|gb|EEF24816.1| Naphthalene 1,2-dioxygenase system ferredoxin subunit, putative
[Ricinus communis]
Length = 105
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 15/112 (13%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDG 150
W+ V L E + + G+ + L +DE FA + ++ L++ +DG
Sbjct: 3 WIKVASAQELSNDEAKTVNVAGQGVALFRIEDEFFATDGMC----THATALLSEGYVEDG 58
Query: 151 CIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
C+ CP + FD+RTG P L PVK + +IY+
Sbjct: 59 CVECPLHQGRFDIRTGKA-----------MCAPVTVDLRTHPVKREGDDIYV 99
>gi|357405363|ref|YP_004917287.1| Biphenyl dioxygenase system ferredoxin subunit [Methylomicrobium
alcaliphilum 20Z]
gi|351718028|emb|CCE23693.1| Biphenyl dioxygenase system ferredoxin subunit [Methylomicrobium
alcaliphilum 20Z]
Length = 106
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 15/114 (13%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W+ VV AL GE VI DG + + E FAIE+ +GA + + +L D
Sbjct: 3 DWIDVVDQDALADGEHVVIDVDGADVAIFKIDGEFFAIEDVCTHDGAE---IASGELDGD 59
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIR 203
I+CP + F ++TGAV+ +P PA + FP++ + I +R
Sbjct: 60 E-IICPRHGARFCVKTGAVK-----SP------PAYEDIPCFPLRIENHRIQVR 101
>gi|37651312|dbj|BAC98958.1| ferredoxin [Xanthobacter polyaromaticivorans]
Length = 110
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 17/116 (14%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAE-GAYSEGLINAKLTQD 149
W V+PL+ LP+G+ +V E IL+ +V+A+++ + + +G ++ + +
Sbjct: 3 WNYVLPLADLPEGDMKVFNGGAEPILICNVDGQVYAVQDTCTHDTWSLCDGYLDGHIVE- 61
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
C + FD+RTG V +AL PA L IFP+K + IY+ E
Sbjct: 62 ----CSLHMAKFDVRTGEV----------KAL-PACKALKIFPIKIENGEIYVDPE 102
>gi|331697985|ref|YP_004334224.1| Rieske (2Fe-2S) domain-containing protein [Pseudonocardia
dioxanivorans CB1190]
gi|326952674|gb|AEA26371.1| Rieske (2Fe-2S) iron-sulfur domain protein [Pseudonocardia
dioxanivorans CB1190]
Length = 118
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLL-WYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
W V L L +G+ V+ GE I ++ Y+DE A+ N + + L L +D
Sbjct: 3 WEAVADLDQLEEGDMMVVEMKGEPICVVRLYEDEAVAVHNTCTHQ---QQPLNEGYLQED 59
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
++CP S FDLRTG R PA+S + ++ K ++ I++ E
Sbjct: 60 DTLICPAHNSCFDLRTGEPRG-----------VPAVSPIPVYACKIEDDAIWVDPE 104
>gi|448734795|ref|ZP_21717015.1| ferredoxin domain-containing protein [Halococcus salifodinae DSM
8989]
gi|445799425|gb|EMA49804.1| ferredoxin domain-containing protein [Halococcus salifodinae DSM
8989]
Length = 581
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 18/113 (15%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLTQD 149
+V V LS L R+V+ DG I L ++ EV+A++NR P G + G + +D
Sbjct: 8 YVQVASLSDLEDEGRQVVSSDGRPIALFHHEGEVYAVDNRCPHMGFPLTRGTV-----ED 62
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
G + C + F+L G D + ++ + FP + D+ +Y+
Sbjct: 63 GILTCHWHHARFELEEGDTFDLFADD------------VQTFPTEIDDGEVYL 103
>gi|399576979|ref|ZP_10770734.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Halogranum salarium B-1]
gi|399238423|gb|EJN59352.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Halogranum salarium B-1]
Length = 582
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 20/118 (16%)
Query: 88 GENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEG-AYSEGLINAKL 146
+ +V VPLS L R+++ DG + L +++ EV A++NR P G +EG ++
Sbjct: 5 ADGYVEAVPLSDLRAEGRKLVTLDGAHVALFYHEGEVRAVDNRCPHMGFPLTEGSVD--- 61
Query: 147 TQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKN--IYI 202
DG + C + F+L G D P + +PV+ D++N +Y+
Sbjct: 62 --DGILTCHWHHARFELSCGDTFD------------PWADDVQAYPVEVDDENDTVYV 105
>gi|219124082|ref|XP_002182341.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406302|gb|EEC46242.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 479
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 8/106 (7%)
Query: 106 RVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGC---IVCPTTESTFD 162
R+ +++ T + Y E ++ P G ++E +++ L +DGC IVCP ++ F
Sbjct: 361 RLPVEESTTSFIESY-SETDVSNSKGPDSGFFTELEVSSILQKDGCEDCIVCPLHKTAFA 419
Query: 163 LRTGAVR-DWYPNNPVLRALTPAL---STLYIFPVKTDEKNIYIRM 204
L +G VR +W P P+L + A+ + +F V+T KN+ +R+
Sbjct: 420 LGSGQVRGEWCPYPPILGKIVGAVKPPTAAAVFDVRTRGKNVQVRL 465
>gi|359462970|ref|ZP_09251533.1| ferredoxin subunits of nitrite reductase and ring-hydroxylating
[Acaryochloris sp. CCMEE 5410]
Length = 572
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
Query: 94 VVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIV 153
V L+ L + V+ DG+ I L K+++FAI+NR P G ++ QDG ++
Sbjct: 11 VADLADLSESGCHVVYVDGKAIALFRQKEQIFAIDNRCPHMGF----PLHKGTAQDGILI 66
Query: 154 CPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
C + FDL +G D + ++ + FPV+ E I++ +
Sbjct: 67 CHWHHARFDLASGGTFDLWADD------------VQAFPVEIREGQIWVDL 105
>gi|344200197|ref|YP_004784523.1| nitrite reductase (NAD(P)H) small subunit [Acidithiobacillus
ferrivorans SS3]
gi|343775641|gb|AEM48197.1| nitrite reductase (NAD(P)H), small subunit [Acidithiobacillus
ferrivorans SS3]
Length = 106
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 19/118 (16%)
Query: 91 WVPVVPLSALPK-GERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLTQ 148
W+ + + +P G R V G+ +L DE+FA+ N P G SEG ++ K+
Sbjct: 3 WLALGSIEEIPALGGRYVDTPQGQVAILRNENDEIFAVSNHCPHRGGPLSEGFVSGKI-- 60
Query: 149 DGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEG 206
+ CP DL G A+ P + FPVK +++ +++ +EG
Sbjct: 61 ---VFCPLHNWQIDLEKG------------EAMAPDHGCVKTFPVKIEDQQVWLGLEG 103
>gi|385204312|ref|ZP_10031182.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Burkholderia sp. Ch1-1]
gi|385184203|gb|EIF33477.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Burkholderia sp. Ch1-1]
Length = 120
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 18/127 (14%)
Query: 89 ENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQ 148
+ +PV + L G+R++ G ++L + AI++ P +GA + N L
Sbjct: 4 SDQIPVGAVGELVPGQRKLAFISGRGVVLFNIDGTIHAIDDSCPHQGAS---VANGHL-- 58
Query: 149 DGCIV-CPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEGG 207
DGC++ CP FDLRTG + P +L FPV+ + +++ +E
Sbjct: 59 DGCVLSCPAHGLRFDLRTGCMP------------GPGGLSLATFPVRAIDGKLFVSLEDP 106
Query: 208 ASSDASA 214
A+ A A
Sbjct: 107 AAVPAQA 113
>gi|434395111|ref|YP_007130058.1| CAB/ELIP/HLIP-like protein [Gloeocapsa sp. PCC 7428]
gi|428266952|gb|AFZ32898.1| CAB/ELIP/HLIP-like protein [Gloeocapsa sp. PCC 7428]
Length = 57
Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 28/39 (71%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN +E +NG+AA IGFLLL+ E LTGKG+L G
Sbjct: 18 FGFNEYAERLNGRAAMIGFLLLIVIEYLTGKGVLAWLGL 56
>gi|315426859|dbj|BAJ48480.1| ferredoxin [Candidatus Caldiarchaeum subterraneum]
gi|343485577|dbj|BAJ51231.1| ferredoxin [Candidatus Caldiarchaeum subterraneum]
Length = 120
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 53/112 (47%), Gaps = 15/112 (13%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDG 150
V V L +G+ RV+ GE +L+L +K ++FA+ N E Y+E L+N L DG
Sbjct: 22 LVKVCREDELGEGDMRVVEAGGEQVLVLRHKGKLFAVSNICTHE--YAE-LVNG-LVVDG 77
Query: 151 CIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
I CP S F L TG V NP PA L + + E I++
Sbjct: 78 TITCPVHLSRFRLETGEVL-----NP------PATKNLKTYKIHVLEGEIFV 118
>gi|224823954|ref|ZP_03697062.1| Rieske (2Fe-2S) domain protein [Pseudogulbenkiania ferrooxidans
2002]
gi|224603373|gb|EEG09548.1| Rieske (2Fe-2S) domain protein [Pseudogulbenkiania ferrooxidans
2002]
Length = 106
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 15/114 (13%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W+ V P P G R + DG I + + +AIE+ E +E L ++ D
Sbjct: 3 DWLDVAPADGFPPGTFRTVDADGVPIAVFNVEGRYYAIEDLCSHE---AETLSGGEVLGD 59
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIR 203
CIVCP + F LRTGA PA + FPV+ ++ + +R
Sbjct: 60 -CIVCPRHGAPFSLRTGAALG-----------PPAYEPVATFPVRVEQGMVQVR 101
>gi|403051990|ref|ZP_10906474.1| putative ferredoxin [Acinetobacter bereziniae LMG 1003]
gi|445427129|ref|ZP_21437788.1| putative biphenyl dioxygenase ferredoxin subunit [Acinetobacter sp.
WC-743]
gi|444751974|gb|ELW76668.1| putative biphenyl dioxygenase ferredoxin subunit [Acinetobacter sp.
WC-743]
Length = 101
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 15/115 (13%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W+ V + + E + I DG+ I + + D+ FAIEN P ++ L+ +D
Sbjct: 2 SWISVCQQDDITEDEPKAIDVDGKKIGVFFIDDQYFAIENVCP----HAFALLTEGFIED 57
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
+ CP E+ FD+ TG ++ P L +PV+ + +++ I++
Sbjct: 58 QTVECPLHEAIFDIPTGELKS-----------GPGCRDLCTYPVRIEGQDVQIQL 101
>gi|347539979|ref|YP_004847404.1| Rieske (2Fe-2S) domain containing protein [Pseudogulbenkiania sp.
NH8B]
gi|345643157|dbj|BAK76990.1| Rieske (2Fe-2S) domain protein [Pseudogulbenkiania sp. NH8B]
Length = 106
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 15/114 (13%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W+ V P P G R + DG I + + +AIE+ E +E L ++ D
Sbjct: 3 DWLDVAPADGFPPGTFRTVDADGVPIAVFNVEGRYYAIEDLCSHE---AETLSGGEVLGD 59
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIR 203
CIVCP + F LRTGA PA + FPV+ ++ + +R
Sbjct: 60 -CIVCPRHGAPFSLRTGAALG-----------PPAYEPVTTFPVRVEQGMVQVR 101
>gi|118591226|ref|ZP_01548625.1| nitrite reductase [NAD(P)H], small subunit protein [Stappia
aggregata IAM 12614]
gi|118436302|gb|EAV42944.1| nitrite reductase [NAD(P)H], small subunit protein [Stappia
aggregata IAM 12614]
Length = 113
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 9/83 (10%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWY--KDEVFAIENRSPAE-GAYSEGLINAKL 146
NWV + L +P+ R + ++GE + ++ KD+VFA+E++ P + G S+G+++
Sbjct: 7 NWVHIGTLEDIPREGARCV-KNGEMTIAVFRTAKDDVFALEDKCPHKNGPLSQGIVH--- 62
Query: 147 TQDGCIVCPTTESTFDLRTGAVR 169
DGC+ CP L TGA +
Sbjct: 63 --DGCVTCPLHNWVISLETGAAQ 83
>gi|119945234|ref|YP_942914.1| Rieske (2Fe-2S) domain-containing protein [Psychromonas ingrahamii
37]
gi|119863838|gb|ABM03315.1| Rieske (2Fe-2S) domain protein [Psychromonas ingrahamii 37]
Length = 105
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 15/115 (13%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDG 150
W+ V+P L G +V+ D +LL+ E FAIENR +G G +N
Sbjct: 4 WISVLPADELSAGMTKVLALDQIELLLINIAGEFFAIENRCSHDG----GELNGGEICAA 59
Query: 151 CIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
I CP + F+++TGAV PA + +PV+ + + + +
Sbjct: 60 EITCPRHGARFNIKTGAVLS-----------APAFENIATYPVRIIDNEVQVFLH 103
>gi|428773198|ref|YP_007164986.1| CAB/ELIP/HLIP family protein [Cyanobacterium stanieri PCC 7202]
gi|428687477|gb|AFZ47337.1| CAB/ELIP/HLIP family protein [Cyanobacterium stanieri PCC 7202]
Length = 72
Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 235 EVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 280
E +M VD + FGFN +E +NG+ A IGF+ L+ FE+LTG+GL+
Sbjct: 22 EPKMYVDSS-QQFGFNKYAEKLNGRLAMIGFISLIGFEVLTGQGLI 66
>gi|254429487|ref|ZP_05043194.1| hypothetical protein ADG881_2717 [Alcanivorax sp. DG881]
gi|196195656|gb|EDX90615.1| hypothetical protein ADG881_2717 [Alcanivorax sp. DG881]
Length = 114
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 7/108 (6%)
Query: 100 LPKGERRVIIQDGETILLLWY-KDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTE 158
LP+G+ R + + G+T L++++ D +A + R A L K+ +D C+ CP
Sbjct: 11 LPEGQSRAM-KAGDTKLVVYHLSDGFYATQARCTHMFA---SLGKGKILKDQCVQCPLHR 66
Query: 159 STFDLRTGAVRDW--YPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
+ FD+RTG V +W +P + + L +PV ++ +Y+ +
Sbjct: 67 AKFDIRTGEVSEWANFPPGVQMLNVVRGEKALETWPVTEEDGQLYVEI 114
>gi|399041073|ref|ZP_10736260.1| NAD(P)H-nitrite reductase [Rhizobium sp. CF122]
gi|398060695|gb|EJL52512.1| NAD(P)H-nitrite reductase [Rhizobium sp. CF122]
Length = 510
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 15/108 (13%)
Query: 95 VPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVC 154
+ L+ LP G + V +DGE +LL+ E+FA+ + A Y L++ L D + C
Sbjct: 17 IALADLPDGGKLVGHRDGEAVLLVRRGAEIFAV---AAACSHYGGPLVDG-LVADNSVRC 72
Query: 155 PTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
P + FDLRTG LRA PALS L + V+ + I++
Sbjct: 73 PWHHACFDLRTG---------EALRA--PALSPLACWSVEKRGERIFV 109
>gi|390567192|ref|ZP_10247540.1| anthranilate dioxygenase ferredoxin reductase AndAb [Burkholderia
terrae BS001]
gi|420251844|ref|ZP_14755002.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Burkholderia sp. BT03]
gi|389940892|gb|EIN02673.1| anthranilate dioxygenase ferredoxin reductase AndAb [Burkholderia
terrae BS001]
gi|398056851|gb|EJL48832.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Burkholderia sp. BT03]
Length = 107
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 17/118 (14%)
Query: 89 ENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLT 147
+NW + L +GE + I + DEVFA+ + + SEG +
Sbjct: 6 DNWQTIGTLDDFAEGEPAAVFAGDRQIAVFRIGDEVFALNDLCTHGHARLSEGYV----- 60
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
+DGC+ CP + D+RTGA R P + FP++ E + + +E
Sbjct: 61 EDGCVECPLHQGLIDIRTGAAR-----------CAPITEAVRAFPIRIVEARVEVNVE 107
>gi|126640995|ref|YP_001083979.1| ferredoxin [Acinetobacter baumannii ATCC 17978]
gi|332854489|ref|ZP_08435396.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6013150]
gi|332870925|ref|ZP_08439557.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6013113]
gi|332872917|ref|ZP_08440881.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6014059]
gi|332727977|gb|EGJ59370.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6013150]
gi|332731888|gb|EGJ63167.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6013113]
gi|332738928|gb|EGJ69791.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6014059]
Length = 106
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 55/117 (47%), Gaps = 15/117 (12%)
Query: 88 GENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLT 147
G +W+ V + + E + + +G+ I + + + FAIEN P ++ L+
Sbjct: 5 GMSWISVCQQGDVSEDEPKAVEVEGKKIGVFFVDENYFAIENVCP----HAYALLTEGFI 60
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
+D + CP E+ FD++TG ++ P L +PV+ + ++I I++
Sbjct: 61 EDQTVECPLHEAIFDIQTGELKS-----------GPGCRNLCTYPVRVEGQDIQIQL 106
>gi|315428041|dbj|BAJ49629.1| ferredoxin [Candidatus Caldiarchaeum subterraneum]
Length = 102
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 53/112 (47%), Gaps = 15/112 (13%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDG 150
V V L +G+ RV+ GE +L+L +K ++FA+ N E Y+E L+N + DG
Sbjct: 4 LVKVCREEELGEGDMRVVEAGGEQVLVLRHKGKLFAVSNICTHE--YAE-LVNG-IVVDG 59
Query: 151 CIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
I CP S F L TG V NP PA L + V E I++
Sbjct: 60 TITCPVHLSRFRLETGEVL-----NP------PATKNLKTYKVHVLEGEIFV 100
>gi|119716366|ref|YP_923331.1| Rieske (2Fe-2S) domain-containing protein [Nocardioides sp. JS614]
gi|119537027|gb|ABL81644.1| Rieske (2Fe-2S) domain protein [Nocardioides sp. JS614]
Length = 116
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 17/111 (15%)
Query: 94 VVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLTQDGC- 151
V +S L G+ V+ DGE +LL+ KD+V+AI N S AEG G +L + C
Sbjct: 6 VAHISDLTPGQTTVVDLDGEEVLLVRIKDKVYAINNLCSHAEGWLDMG----QLFESSCE 61
Query: 152 IVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
I CP + FDLRTG PA + ++ V+ ++ +I++
Sbjct: 62 IGCPLHDGRFDLRTGQATH-----------EPATEPVPVYRVEVEDGDIFL 101
>gi|158338420|ref|YP_001519597.1| nitrite reductase ferredoxin subunit [Acaryochloris marina
MBIC11017]
gi|158308661|gb|ABW30278.1| Ferredoxin subunits of nitrite reductase and ring-hydroxylating
[Acaryochloris marina MBIC11017]
Length = 572
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 16/111 (14%)
Query: 94 VVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIV 153
V L+ L + V+ DG+ I L D++FAI+NR P G ++ QDG ++
Sbjct: 11 VADLADLSESGCHVVYVDGKAIALFRQTDQIFAIDNRCPHMGF----PLHKGTAQDGILI 66
Query: 154 CPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
C + FDL +G D + ++ + FPV+ E I++ +
Sbjct: 67 CHWHHARFDLASGGTFDLWADD------------VQSFPVEIREGQIWVDL 105
>gi|390575634|ref|ZP_10255721.1| ferredoxin [Burkholderia terrae BS001]
gi|389932433|gb|EIM94474.1| ferredoxin [Burkholderia terrae BS001]
Length = 106
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 15/116 (12%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+WV VV + P G R + DG + + +AIEN P +G G++ +
Sbjct: 3 DWVDVVAIEDFPAGAVRSVEVDGAQVAVFNVDGTCYAIENICPHDG----GILTGGTMEG 58
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
++CP + F +RTG V PA + +FPV+ + +R E
Sbjct: 59 DVVICPRHGARFCIRTGKV-----------LAPPAYEDVVVFPVRIQAGVVQVRDE 103
>gi|421484818|ref|ZP_15932384.1| 2-hydroxybenzoate 5-hydroxylase ferredoxin [Achromobacter
piechaudii HLE]
gi|400196851|gb|EJO29821.1| 2-hydroxybenzoate 5-hydroxylase ferredoxin [Achromobacter
piechaudii HLE]
Length = 106
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 18/119 (15%)
Query: 89 ENWVPVVPLSAL-PKGERRVIIQDGETILLLWYKDEVFAIENRSP-AEGAYSEGLINAKL 146
E W PV + + P ++ DGE + L + E+ A ++R P + ++G +
Sbjct: 2 ETWKPVAQVGDISPDTGTLRVVHDGEGVCLYDLQGEICATQDRCPHGNASLADGYV---- 57
Query: 147 TQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
+DG I CP + FD+RTG P P P + L + V+ + IY++ E
Sbjct: 58 -EDGTIECPLHQGVFDIRTGK-----PQCP------PVTTDLRRYEVRVEANTIYLKAE 104
>gi|359430656|ref|ZP_09221653.1| putative dioxygenase [Acinetobacter sp. NBRC 100985]
gi|358233940|dbj|GAB03192.1| putative dioxygenase [Acinetobacter sp. NBRC 100985]
Length = 101
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 15/115 (13%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W+ V + + E + I DG+ I + + ++ FAIEN P ++ L+ +D
Sbjct: 2 SWISVCQQDEVTEDEPKAIEVDGKKIGVFFIEENYFAIENVCP----HAFALLTEGFIED 57
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
+ CP E+ FD++TG ++ P L +PV+ + +I I++
Sbjct: 58 QTVECPLHEAIFDIQTGELKS-----------GPGCRDLCTYPVRVEGTDIQIQL 101
>gi|172035518|ref|YP_001802019.1| CAB/ELIP/HLIP family protein [Cyanothece sp. ATCC 51142]
gi|171696972|gb|ACB49953.1| probable CAB/ELIP/HLIP family protein [Cyanothece sp. ATCC 51142]
Length = 91
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 24/46 (52%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 235 EVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 280
E +M VD+ + FGFN +E +NG+ A IGF+ LL FE LTG+GL+
Sbjct: 41 EPKMYVDQKKQ-FGFNKYAEKLNGRLAMIGFISLLAFESLTGQGLV 85
>gi|172054913|ref|YP_001806240.1| CAB/ELIP/HLIP family protein [Cyanothece sp. ATCC 51142]
gi|354555338|ref|ZP_08974640.1| Chlorophyll A-B binding protein [Cyanothece sp. ATCC 51472]
gi|354555606|ref|ZP_08974907.1| Chlorophyll A-B binding protein [Cyanothece sp. ATCC 51472]
gi|57864856|gb|AAW57031.1| putative high-light inducible protein [Cyanothece sp. ATCC 51142]
gi|171701194|gb|ACB54174.1| CAB/ELIP/HLIP family protein [Cyanothece sp. ATCC 51142]
gi|353552665|gb|EHC22060.1| Chlorophyll A-B binding protein [Cyanothece sp. ATCC 51472]
gi|353552929|gb|EHC22323.1| Chlorophyll A-B binding protein [Cyanothece sp. ATCC 51472]
Length = 70
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 24/46 (52%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 235 EVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 280
E +M VD+ + FGFN +E +NG+ A IGF+ LL FE LTG+GL+
Sbjct: 20 EPKMYVDQKKQ-FGFNKYAEKLNGRLAMIGFISLLAFESLTGQGLV 64
>gi|209549054|ref|YP_002280971.1| nitrite reductase (NAD(P)H) small subunit [Rhizobium leguminosarum
bv. trifolii WSM2304]
gi|424914355|ref|ZP_18337719.1| NAD(P)H-dependent nitrite reductase, small subunit [Rhizobium
leguminosarum bv. trifolii WSM597]
gi|209534810|gb|ACI54745.1| nitrite reductase (NAD(P)H), small subunit [Rhizobium leguminosarum
bv. trifolii WSM2304]
gi|392850531|gb|EJB03052.1| NAD(P)H-dependent nitrite reductase, small subunit [Rhizobium
leguminosarum bv. trifolii WSM597]
Length = 114
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 19/119 (15%)
Query: 89 ENWVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKL 146
ENW P+ +S +P +G R V G+ + ++EVFAIE+ P +G S+G+++AK
Sbjct: 6 ENWHPIGDISDIPLRGARCVKTPQGKIAVFRTAENEVFAIEDHCPHKGGPLSQGIVHAK- 64
Query: 147 TQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
+ CP L TG +AL + PV+ ++ ++I +E
Sbjct: 65 ----AVTCPLHNWVISLETG------------KALGADQGEVRTIPVRNEDGALFIALE 107
>gi|33591788|ref|NP_879432.1| ferredoxin [Bordetella pertussis Tohama I]
gi|33594991|ref|NP_882634.1| ferredoxin [Bordetella parapertussis 12822]
gi|33599268|ref|NP_886828.1| ferredoxin [Bordetella bronchiseptica RB50]
gi|384203091|ref|YP_005588830.1| ferredoxin [Bordetella pertussis CS]
gi|408417215|ref|YP_006627922.1| ferredoxin [Bordetella pertussis 18323]
gi|410418076|ref|YP_006898525.1| ferredoxin [Bordetella bronchiseptica MO149]
gi|410471071|ref|YP_006894352.1| ferredoxin [Bordetella parapertussis Bpp5]
gi|412340430|ref|YP_006969185.1| ferredoxin [Bordetella bronchiseptica 253]
gi|427812529|ref|ZP_18979593.1| ferredoxin [Bordetella bronchiseptica 1289]
gi|427817558|ref|ZP_18984621.1| ferredoxin [Bordetella bronchiseptica D445]
gi|427821513|ref|ZP_18988575.1| ferredoxin [Bordetella bronchiseptica Bbr77]
gi|33565067|emb|CAE40017.1| ferredoxin [Bordetella parapertussis]
gi|33571431|emb|CAE44914.1| ferredoxin [Bordetella pertussis Tohama I]
gi|33575314|emb|CAE30777.1| ferredoxin [Bordetella bronchiseptica RB50]
gi|332381205|gb|AEE66052.1| ferredoxin [Bordetella pertussis CS]
gi|401779385|emb|CCJ64906.1| ferredoxin [Bordetella pertussis 18323]
gi|408441181|emb|CCJ47607.1| ferredoxin [Bordetella parapertussis Bpp5]
gi|408445371|emb|CCJ57020.1| ferredoxin [Bordetella bronchiseptica MO149]
gi|408770264|emb|CCJ55055.1| ferredoxin [Bordetella bronchiseptica 253]
gi|410563529|emb|CCN21063.1| ferredoxin [Bordetella bronchiseptica 1289]
gi|410568558|emb|CCN16603.1| ferredoxin [Bordetella bronchiseptica D445]
gi|410586778|emb|CCN01802.1| ferredoxin [Bordetella bronchiseptica Bbr77]
Length = 103
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 17/118 (14%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKD-EVFAIENRSPAEGAYSEGLINAKLTQ 148
NW+ + L E + GE L L+ + E FA +N ++ L++ +
Sbjct: 2 NWIKIATTDQLEDDEVMPVTA-GEAKLALYRSEGEYFASDNVC----THAYALLSDGYLE 56
Query: 149 DGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEG 206
DGCI CP ++ FD++TG PA + + I+P+K + +IY+ ++
Sbjct: 57 DGCIECPLHQARFDIKTGKAM-----------CAPATADIRIYPLKIENDDIYVDLQA 103
>gi|407787433|ref|ZP_11134574.1| nitrite reductase (NAD(P)H) small subunit [Celeribacter
baekdonensis B30]
gi|407199711|gb|EKE69726.1| nitrite reductase (NAD(P)H) small subunit [Celeribacter
baekdonensis B30]
Length = 106
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 89 ENWVPVVPLSALPK-GERRVIIQDGETILLLWYKDEVFAIENRSPAE-GAYSEGLINAKL 146
+ WV + PL+ +P+ G R V D + D++FA+E++ P + G S+G+++
Sbjct: 6 KTWVSIGPLTEIPRQGARCVKNGDMSIAVFRTSHDQIFALEDKCPHKNGPLSQGIVH--- 62
Query: 147 TQDGCIVCPTTESTFDLRTGAVR 169
DGC+ CP L TGA +
Sbjct: 63 --DGCVTCPLHNWVISLETGAAQ 83
>gi|435850531|ref|YP_007312117.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Methanomethylovorans hollandica DSM 15978]
gi|433661161|gb|AGB48587.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Methanomethylovorans hollandica DSM 15978]
Length = 107
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 58/118 (49%), Gaps = 18/118 (15%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRS-PAEGAYSEGLINAKLTQ 148
NWV V+ + L GE++ ++ DG+ I L+ +E+FAI N+ E S+G + +
Sbjct: 5 NWVYVLETAELVDGEKKALVVDGQRIALIKKGNELFAISNKCVHMECPLSKGELEGYI-- 62
Query: 149 DGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEG 206
I CP + FD+R+G D R L ++ ++ + IY++++G
Sbjct: 63 ---IKCPCHDWRFDIRSGEFLD-------ARELKVD-----VYELQVSDGKIYLKIKG 105
>gi|406719414|dbj|BAM45016.1| putative ferredoxin [Acinetobacter haemolyticus]
Length = 101
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 54/115 (46%), Gaps = 15/115 (13%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W+ V + + E + I DG+ I + + ++ FAIEN P ++ L+ +D
Sbjct: 2 SWISVCQQDDVTEDEPKAIEVDGKKIGVFFIDEKYFAIENVCP----HAYALLTEGFIED 57
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
+ CP E+ FD++TG ++ P L +PV+ + + + I++
Sbjct: 58 QTVECPLHEAIFDIQTGELKS-----------GPGCRDLCTYPVRVEGQEVQIQL 101
>gi|154245028|ref|YP_001415986.1| nitrite reductase (NAD(P)H) small subunit [Xanthobacter
autotrophicus Py2]
gi|154159113|gb|ABS66329.1| nitrite reductase (NAD(P)H), small subunit [Xanthobacter
autotrophicus Py2]
Length = 110
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 19/118 (16%)
Query: 90 NWVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
NW+ + +S +P +G R V +G + D++FAIE+R P +G S+G+++
Sbjct: 3 NWIAIGSISDIPSRGARCVTTPNGRIGVFRTVDDQIFAIEDRCPHKGGPLSQGIVHG--- 59
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
+ CP T L +G +A ++ FPVK + I+I +E
Sbjct: 60 --AAVTCPMHNWTIALESG------------QATGADEGSVKTFPVKVEHDQIFIGLE 103
>gi|421465006|ref|ZP_15913694.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter radioresistens WC-A-157]
gi|400204268|gb|EJO35252.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter radioresistens WC-A-157]
Length = 101
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 54/115 (46%), Gaps = 15/115 (13%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W+ V + + E + I +G+ I + + + FAIEN P ++ L+ +D
Sbjct: 2 SWISVCQQGDVSEDEPKAIEVEGKKIGIFFVDENYFAIENVCP----HAYALLTEGFIED 57
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
+ CP E+ FD++TG ++ P L +PV+ + ++I I++
Sbjct: 58 QTVECPLHEAIFDIQTGELKS-----------GPGCRNLCTYPVRVEGQDIQIQL 101
>gi|448731076|ref|ZP_21713379.1| ferredoxin domain-containing protein [Halococcus saccharolyticus
DSM 5350]
gi|445792670|gb|EMA43271.1| ferredoxin domain-containing protein [Halococcus saccharolyticus
DSM 5350]
Length = 581
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 18/113 (15%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLTQD 149
+V V LS L R+V+ DG I L ++ EV+A++NR P G + G + +D
Sbjct: 8 YVQVASLSDLEDEGRQVVSSDGRPIALFHHEGEVYAVDNRCPHMGFPLTRGTV-----ED 62
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
G + C + F+L G D + ++ + FP + E +Y+
Sbjct: 63 GILTCHWHHARFELEEGDTFDLFADD------------VQTFPTEIKEGEVYL 103
>gi|159487965|ref|XP_001701993.1| rieske ferredoxin [Chlamydomonas reinhardtii]
gi|158281212|gb|EDP06968.1| rieske ferredoxin [Chlamydomonas reinhardtii]
Length = 145
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 58/109 (53%), Gaps = 8/109 (7%)
Query: 103 GERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEG---LINAKLTQDGCIVCPTTES 159
G ++V+ G+ +LLL ++ A+ N+ G +G L A++ +D C++CP +
Sbjct: 38 GGKQVVEVGGQKVLLLDVNGDISAVSNKCSHLGLPIQGKTALFTAEV-KDKCVICPAHGT 96
Query: 160 TFDLRTGAVR-DWYPNNPVLRAL--TPALSTLYIFPVK-TDEKNIYIRM 204
FD++TG V+ +W P P L + P L +F V+ +D +I + +
Sbjct: 97 AFDVKTGEVKGEWCPKLPNLPLVGKGPGKKPLPVFQVRISDNGDIEVNV 145
>gi|20150034|gb|AAM12936.1| MupT [Pseudomonas fluorescens]
Length = 116
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 23/117 (19%)
Query: 98 SALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTT 157
AL +G + +G+ ILL + V+A+ENR P +G +G L + G ++CP
Sbjct: 15 DALEEGGTLAVQVEGQAILLCQARQAVYAVENRCPHQGKTMDG----ALIRRGQLICPHH 70
Query: 158 ESTFDLRTGAVRDWYPNNPVLRALTP----ALSTLYIFPVKTD---EKNIYIRMEGG 207
+ FDL TG AL P AL+T + + +D E+ R+E G
Sbjct: 71 GARFDLETG------------EALGPHTRCALTTYKVHLIDSDVMIEQRAQARLECG 115
>gi|357018461|ref|ZP_09080735.1| anthranilate dioxygenase ferredoxin [Mycobacterium
thermoresistibile ATCC 19527]
gi|356481751|gb|EHI14845.1| anthranilate dioxygenase ferredoxin [Mycobacterium
thermoresistibile ATCC 19527]
Length = 109
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 17/114 (14%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLTQ 148
WV L +P E ++ DG I L +FA+ +R + + S+G I +
Sbjct: 10 RWVRAACLDDVPGDEPLGLVVDGIEIALFNDDGRIFALADRCTHGDARLSDGYI-----E 64
Query: 149 DGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
DGCI CP ++ FDL TG VR PA + F ++ D +I +
Sbjct: 65 DGCIECPLHQALFDLATGEVR-----------RGPAFEPVRSFEIRIDGDDIIV 107
>gi|145352305|ref|XP_001420491.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580725|gb|ABO98784.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 150
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 116 LLLWYKDEVFAIENRSPAEGAYSEG---LINAKLTQDGCIVCPTTESTFDLRTGAVR-DW 171
LL + ++V+A+ N+ P G +G L++A ++ DG I CP S FDL+TG R +W
Sbjct: 54 LLQEFANDVYAVSNKCPHLGLSLQGKTPLLSATVS-DGAIACPAHGSAFDLKTGEARGEW 112
Query: 172 YPNNPVL 178
P P L
Sbjct: 113 CPKLPAL 119
>gi|417554269|ref|ZP_12205338.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii Naval-81]
gi|417560424|ref|ZP_12211303.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii OIFC137]
gi|421201522|ref|ZP_15658681.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii OIFC109]
gi|421456382|ref|ZP_15905724.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii IS-123]
gi|421635384|ref|ZP_16075986.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii Naval-13]
gi|421661476|ref|ZP_16101652.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii OIFC110]
gi|421694910|ref|ZP_16134527.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii WC-692]
gi|421805034|ref|ZP_16240928.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii WC-A-694]
gi|395523006|gb|EJG11095.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii OIFC137]
gi|395563554|gb|EJG25207.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii OIFC109]
gi|400210810|gb|EJO41774.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii IS-123]
gi|400390686|gb|EJP57733.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii Naval-81]
gi|404567145|gb|EKA72273.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii WC-692]
gi|408702203|gb|EKL47616.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii Naval-13]
gi|408715888|gb|EKL61010.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii OIFC110]
gi|410410084|gb|EKP62004.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii WC-A-694]
Length = 101
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 54/115 (46%), Gaps = 15/115 (13%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W+ V + + E + I +G+ I + + + FAIEN P ++ L+ +D
Sbjct: 2 SWISVCQQGDVSEDEPKAIEVEGKKIGVFFVDENYFAIENVCP----HAYALLTEGFIED 57
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
+ CP E+ FD++TG ++ P L +PV+ + ++I I++
Sbjct: 58 QTVECPLHEAIFDIQTGELKS-----------GPGCRNLCTYPVRVEGQDIQIQL 101
>gi|226951381|ref|ZP_03821845.1| ferredoxin [Acinetobacter sp. ATCC 27244]
gi|294650899|ref|ZP_06728245.1| nitrite reductase (NAD(P)H) small subunit [Acinetobacter
haemolyticus ATCC 19194]
gi|226837903|gb|EEH70286.1| ferredoxin [Acinetobacter sp. ATCC 27244]
gi|292823209|gb|EFF82066.1| nitrite reductase (NAD(P)H) small subunit [Acinetobacter
haemolyticus ATCC 19194]
Length = 101
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 54/115 (46%), Gaps = 15/115 (13%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W+ V + + E + I DG+ I + + ++ FAIEN P ++ L+ +D
Sbjct: 2 SWISVCQQDDVTEDEPKAIEVDGKKIGVFFIDEKYFAIENVCP----HAYALLTEGFIED 57
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
+ CP E+ FD++TG ++ P L +PV+ + + + I++
Sbjct: 58 QTVECPLHEAIFDIQTGELKS-----------GPGCRDLCTYPVRVEGEEVQIQL 101
>gi|269929134|ref|YP_003321455.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Sphaerobacter thermophilus DSM 20745]
gi|269788491|gb|ACZ40633.1| Rieske (2Fe-2S) iron-sulphur domain protein [Sphaerobacter
thermophilus DSM 20745]
Length = 114
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 17/115 (14%)
Query: 89 ENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
+++V V+P + + + E DGE +L DE+FA + E A SEG I
Sbjct: 6 DDYVRVMPAAEVAEEEIYEFEVDGELRILTRVGDEIFACDGICTHEYAEMSEGEI----- 60
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
+D I CP S FDLRTGAV PA++ L ++ VK + +Y+
Sbjct: 61 EDHVIYCPLHGSGFDLRTGAVTSL-----------PAVTPLPVYDVKIVDGEVYV 104
>gi|430005135|emb|CCF20936.1| Assimilatory nitrite reductase [NAD(P)H] small subunit [Rhizobium
sp.]
Length = 117
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 23/118 (19%)
Query: 91 WVPVVPLSALPK-GERRVIIQDGETILLLWY--KDEVFAIENRSPAE-GAYSEGLINAKL 146
WV + + +P+ G RR IQDG + ++ D VFA+E++ P + G SEG++
Sbjct: 12 WVLIGTIDDIPRQGSRR--IQDGARRIAVFRTADDRVFALEDKCPHKNGPLSEGIV---- 65
Query: 147 TQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
DGC+ CP L TG + A ST FPV+ + +N+Y+ +
Sbjct: 66 -HDGCVTCPLHNWVISLETGEAQG---------ADDGRTST---FPVRIEGRNVYLNL 110
>gi|345878125|ref|ZP_08829851.1| glutamate synthase [NADPH] large chain [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344224867|gb|EGV51244.1| glutamate synthase [NADPH] large chain [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 533
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 16/109 (14%)
Query: 94 VVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIV 153
V L L +GE ++ +G + L + V+A+++R P + EG ++ Q+G +
Sbjct: 12 VCDLQQLCEGEGHRVVVNGRPLALFLDQGRVYALDDRCP----HREGQMSRGRVQNGEAI 67
Query: 154 CPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
CP + FDL TG P NP R T FP + + +Y+
Sbjct: 68 CPLHQWNFDLETGV----SPYNPHDRIAT--------FPAELRDDGVYV 104
>gi|376262545|ref|YP_005149265.1| BNR/Asp-box repeat-containing protein [Clostridium sp. BNL1100]
gi|373946539|gb|AEY67460.1| BNR/Asp-box repeat protein [Clostridium sp. BNL1100]
Length = 600
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 50/122 (40%), Gaps = 8/122 (6%)
Query: 88 GENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLT 147
GE+W PV S L + I G TI Y VFA N + A + GL N +
Sbjct: 195 GESWSPVN--SGLTTKQINSITVSGTTIFAGTYGGGVFASTNNGTSWNAVNSGLTNNHIY 252
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPV-LRALTPALSTLYIFPVKTDEKNIYIRMEG 206
+VC T G NN + A+T L+ Y+F + D+KNI+ G
Sbjct: 253 S---LVCSGTNIFAGTDEGIFLS--NNNGISWNAVTSGLTNKYVFSLAADDKNIFAGTNG 307
Query: 207 GA 208
G
Sbjct: 308 GG 309
>gi|262379677|ref|ZP_06072833.1| nitrite reductase [NAD(P)H], small subunit [Acinetobacter
radioresistens SH164]
gi|293608941|ref|ZP_06691244.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|299771157|ref|YP_003733183.1| putative ferredoxin [Acinetobacter oleivorans DR1]
gi|375133841|ref|YP_004994491.1| putative ferredoxin [Acinetobacter calcoaceticus PHEA-2]
gi|421856376|ref|ZP_16288743.1| putative Rieske iron-sulfur protein [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
gi|427424418|ref|ZP_18914541.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii WC-136]
gi|262299134|gb|EEY87047.1| nitrite reductase [NAD(P)H], small subunit [Acinetobacter
radioresistens SH164]
gi|292829514|gb|EFF87876.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|298701245|gb|ADI91810.1| putative ferredoxin [Acinetobacter oleivorans DR1]
gi|325121286|gb|ADY80809.1| putative ferredoxin [Acinetobacter calcoaceticus PHEA-2]
gi|403188315|dbj|GAB74944.1| putative Rieske iron-sulfur protein [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
gi|425698718|gb|EKU68351.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii WC-136]
Length = 101
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 54/115 (46%), Gaps = 15/115 (13%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W+ V + + E + I +G+ I + + + FAIEN P ++ L+ +D
Sbjct: 2 SWISVCQQGDVSEDEPKAIEIEGKKIGVFFVDENYFAIENVCP----HAYALLTEGFIED 57
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
+ CP E+ FD++TG ++ P L +PV+ + ++I I++
Sbjct: 58 QTVECPLHEAIFDIQTGELKS-----------GPGCRNLCTYPVRVEGQDIQIQL 101
>gi|126659669|ref|ZP_01730798.1| hypothetical protein CY0110_29084 [Cyanothece sp. CCY0110]
gi|126619014|gb|EAZ89754.1| hypothetical protein CY0110_29084 [Cyanothece sp. CCY0110]
Length = 70
Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 24/46 (52%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 235 EVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 280
E +M VD+ + FGFN +E +NG+ A IGF+ LL FE LTG+GL+
Sbjct: 20 EPKMYVDQKKQ-FGFNKYAEKLNGRFAMIGFISLLAFEGLTGQGLV 64
>gi|398825049|ref|ZP_10583358.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Bradyrhizobium sp. YR681]
gi|398224294|gb|EJN10607.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Bradyrhizobium sp. YR681]
Length = 120
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 19/119 (15%)
Query: 85 GGGGENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLIN 143
G W+PV L+ L K E V + G +L++W V A + P E A G +
Sbjct: 11 GASETGWIPVCDLARL-KAETIVRVA-GRDMLVIWNDGNVVACDRACPHEQADLGRGQVT 68
Query: 144 AKLTQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
A G ++CP ++FDLR GA+ +P+ P L ++PV+ + I+I
Sbjct: 69 A-----GRLLCPRHAASFDLRDGAITAGWPSPP-----------LRLYPVRITGEKIWI 111
>gi|27378469|ref|NP_769998.1| ferredoxin [Bradyrhizobium japonicum USDA 110]
gi|27351617|dbj|BAC48623.1| blr3358 [Bradyrhizobium japonicum USDA 110]
Length = 123
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 19/113 (16%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLTQD 149
W+PV LS L K E V + G +L++W + +V A + P E A G + A Q
Sbjct: 20 WIPVCDLSRL-KAETIVRVA-GRDMLVIWNEGDVVACDRACPHEQADLGLGQVTAGRLQ- 76
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
CP ++FDLR GA+ +P+ P L ++PVK + I++
Sbjct: 77 ----CPRHAASFDLRDGAITAGWPSPP-----------LRLYPVKVTGEQIWV 114
>gi|126659595|ref|ZP_01730726.1| CAB/ELIP/HLIP-related protein [Cyanothece sp. CCY0110]
gi|126619138|gb|EAZ89876.1| CAB/ELIP/HLIP-related protein [Cyanothece sp. CCY0110]
Length = 58
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query: 243 DLE--GFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
DLE FGFN +E +NG+AA +GFLL+L E LTG+GLL G
Sbjct: 13 DLEEPKFGFNDYAERLNGRAAMVGFLLILVIEYLTGQGLLSWLGL 57
>gi|110835258|ref|YP_694117.1| dioxygenase ferredoxin reductase component [Alcanivorax borkumensis
SK2]
gi|110648369|emb|CAL17845.1| dioxygenase ferredoxin reductase component [Alcanivorax borkumensis
SK2]
Length = 114
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 100 LPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTES 159
LP+G+ R + + G+T L++++ + F + S G K+ +D C+ CP +
Sbjct: 11 LPEGQSRAM-KAGDTKLVVYHLSDGFYATQARCSHMFVSLG--KGKILKDQCVQCPLHRA 67
Query: 160 TFDLRTGAVRDW--YPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
FD+RTGAV +W +P + + L +PV + +Y+ +
Sbjct: 68 KFDIRTGAVTEWANFPPGVQILNVVRGEKALETWPVTEEGGQLYVEI 114
>gi|323139249|ref|ZP_08074303.1| nitrite reductase (NAD(P)H), small subunit [Methylocystis sp. ATCC
49242]
gi|322395470|gb|EFX98017.1| nitrite reductase (NAD(P)H), small subunit [Methylocystis sp. ATCC
49242]
Length = 112
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 49/117 (41%), Gaps = 19/117 (16%)
Query: 90 NWVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
NW + PL +P +G R V + DEVFA+ENR P +G SEG+++ +
Sbjct: 7 NWFDIGPLDQIPQRGARLVKTPRRNIAVFRTAGDEVFALENRCPHKGGPLSEGIVHGRK- 65
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
+ CP DL +G A FPVK ++ IY+ M
Sbjct: 66 ----VACPLHNWVIDLESGT------------ATGADHGCARSFPVKIEKGRIYLEM 106
>gi|407974169|ref|ZP_11155079.1| nitrite reductase (NAD(P)H) small subunit [Nitratireductor indicus
C115]
gi|407430530|gb|EKF43204.1| nitrite reductase (NAD(P)H) small subunit [Nitratireductor indicus
C115]
Length = 122
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 88 GENWVPVVPLSALPKGERRVIIQDGETILLLWYKDE-VFAIENRSPAE-GAYSEGLINAK 145
G+ WVP+ L +P+ R + TI + D+ VFA+E++ P G S+G+++
Sbjct: 6 GQEWVPIGTLHDIPQRGARCVRNGDMTIAVFRTTDDRVFALEDKCPHRAGPLSQGIVH-- 63
Query: 146 LTQDGCIVCPTTESTFDLRTG 166
DGC+ CP L TG
Sbjct: 64 ---DGCVTCPLHNWVISLETG 81
>gi|424740731|ref|ZP_18169110.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii WC-141]
gi|422945522|gb|EKU40474.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii WC-141]
Length = 101
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 54/115 (46%), Gaps = 15/115 (13%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W+ + + + E + I +G+ I + + + FAIEN P ++ L+ +D
Sbjct: 2 SWISICQQGDVSEDEPKAIEIEGKKIGVFFVDENYFAIENVCP----HAYALLTEGFIED 57
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
+ CP E+ FD++TG ++ P L +PV+ + ++I I++
Sbjct: 58 HTVECPLHEAIFDIQTGELKS-----------GPGCRNLCTYPVRVEGQDIQIQL 101
>gi|169796858|ref|YP_001714651.1| ferredoxin [Acinetobacter baumannii AYE]
gi|213156751|ref|YP_002318412.1| rieske (2Fe-2S) protein [Acinetobacter baumannii AB0057]
gi|239503025|ref|ZP_04662335.1| putative ferredoxin [Acinetobacter baumannii AB900]
gi|260551173|ref|ZP_05825376.1| Rieske protein [Acinetobacter sp. RUH2624]
gi|260555877|ref|ZP_05828097.1| nitrite reductase [NAD(P)H], small subunit [Acinetobacter baumannii
ATCC 19606 = CIP 70.34]
gi|301345241|ref|ZP_07225982.1| putative ferredoxin [Acinetobacter baumannii AB056]
gi|301513554|ref|ZP_07238791.1| putative ferredoxin [Acinetobacter baumannii AB058]
gi|301594446|ref|ZP_07239454.1| putative ferredoxin [Acinetobacter baumannii AB059]
gi|385236593|ref|YP_005797932.1| putative ferredoxin [Acinetobacter baumannii TCDC-AB0715]
gi|387124869|ref|YP_006290751.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Acinetobacter baumannii MDR-TJ]
gi|403677086|ref|ZP_10938910.1| putative ferredoxin [Acinetobacter sp. NCTC 10304]
gi|407931924|ref|YP_006847567.1| ferredoxin [Acinetobacter baumannii TYTH-1]
gi|417563882|ref|ZP_12214756.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii OIFC143]
gi|417571215|ref|ZP_12222072.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii OIFC189]
gi|417576208|ref|ZP_12227053.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-17]
gi|417872621|ref|ZP_12517517.1| putative ferredoxin [Acinetobacter baumannii ABNIH2]
gi|417877042|ref|ZP_12521778.1| putative ferredoxin [Acinetobacter baumannii ABNIH3]
gi|417880684|ref|ZP_12525153.1| putative ferredoxin [Acinetobacter baumannii ABNIH4]
gi|421202345|ref|ZP_15659496.1| putative ferredoxin [Acinetobacter baumannii AC12]
gi|421535549|ref|ZP_15981808.1| putative ferredoxin [Acinetobacter baumannii AC30]
gi|421625353|ref|ZP_16066206.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii OIFC098]
gi|421631063|ref|ZP_16071752.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii OIFC180]
gi|421643469|ref|ZP_16083963.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii IS-235]
gi|421646147|ref|ZP_16086599.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii IS-251]
gi|421651330|ref|ZP_16091699.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii OIFC0162]
gi|421656530|ref|ZP_16096835.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii Naval-72]
gi|421658803|ref|ZP_16099034.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii Naval-83]
gi|421679736|ref|ZP_16119604.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii OIFC111]
gi|421689299|ref|ZP_16128983.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii IS-143]
gi|421700239|ref|ZP_16139756.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii IS-58]
gi|421702747|ref|ZP_16142223.1| putative ferredoxin [Acinetobacter baumannii ZWS1122]
gi|421706497|ref|ZP_16145910.1| putative ferredoxin [Acinetobacter baumannii ZWS1219]
gi|421786411|ref|ZP_16222814.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii Naval-82]
gi|421801744|ref|ZP_16237701.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii Canada BC1]
gi|424053331|ref|ZP_17790863.1| hypothetical protein W9G_02020 [Acinetobacter baumannii Ab11111]
gi|424056452|ref|ZP_17793973.1| hypothetical protein W9I_02822 [Acinetobacter nosocomialis Ab22222]
gi|424060798|ref|ZP_17798289.1| hypothetical protein W9K_01912 [Acinetobacter baumannii Ab33333]
gi|424063006|ref|ZP_17800491.1| hypothetical protein W9M_00289 [Acinetobacter baumannii Ab44444]
gi|425741045|ref|ZP_18859204.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii WC-487]
gi|425747839|ref|ZP_18865837.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii WC-348]
gi|425752561|ref|ZP_18870468.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii Naval-113]
gi|445400905|ref|ZP_21430206.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii Naval-57]
gi|445454526|ref|ZP_21445448.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii WC-A-92]
gi|445456324|ref|ZP_21445770.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii OIFC047]
gi|445466257|ref|ZP_21450236.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii OIFC338]
gi|445475369|ref|ZP_21453371.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii Naval-78]
gi|445491477|ref|ZP_21459792.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii AA-014]
gi|169149785|emb|CAM87676.1| putative ferredoxin [Acinetobacter baumannii AYE]
gi|193076679|gb|ABO11377.2| putative ferredoxin [Acinetobacter baumannii ATCC 17978]
gi|213055911|gb|ACJ40813.1| rieske (2Fe-2S) protein [Acinetobacter baumannii AB0057]
gi|260405778|gb|EEW99267.1| Rieske protein [Acinetobacter sp. RUH2624]
gi|260410788|gb|EEX04086.1| nitrite reductase [NAD(P)H], small subunit [Acinetobacter baumannii
ATCC 19606 = CIP 70.34]
gi|323517091|gb|ADX91472.1| putative ferredoxin [Acinetobacter baumannii TCDC-AB0715]
gi|342233398|gb|EGT98133.1| putative ferredoxin [Acinetobacter baumannii ABNIH2]
gi|342236481|gb|EGU01001.1| putative ferredoxin [Acinetobacter baumannii ABNIH3]
gi|342239520|gb|EGU03919.1| putative ferredoxin [Acinetobacter baumannii ABNIH4]
gi|385879361|gb|AFI96456.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Acinetobacter baumannii MDR-TJ]
gi|395551663|gb|EJG17672.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii OIFC189]
gi|395555638|gb|EJG21639.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii OIFC143]
gi|395569429|gb|EJG30091.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-17]
gi|398328300|gb|EJN44427.1| putative ferredoxin [Acinetobacter baumannii AC12]
gi|404558679|gb|EKA63960.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii IS-143]
gi|404570621|gb|EKA75694.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii IS-58]
gi|404668750|gb|EKB36659.1| hypothetical protein W9K_01912 [Acinetobacter baumannii Ab33333]
gi|404669119|gb|EKB37026.1| hypothetical protein W9G_02020 [Acinetobacter baumannii Ab11111]
gi|404675008|gb|EKB42733.1| hypothetical protein W9M_00289 [Acinetobacter baumannii Ab44444]
gi|407193562|gb|EKE64718.1| putative ferredoxin [Acinetobacter baumannii ZWS1122]
gi|407193846|gb|EKE64995.1| putative ferredoxin [Acinetobacter baumannii ZWS1219]
gi|407441492|gb|EKF47998.1| hypothetical protein W9I_02822 [Acinetobacter nosocomialis Ab22222]
gi|407900505|gb|AFU37336.1| ferredoxin [Acinetobacter baumannii TYTH-1]
gi|408504857|gb|EKK06587.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii Naval-72]
gi|408507940|gb|EKK09627.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii OIFC0162]
gi|408508152|gb|EKK09838.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii IS-235]
gi|408517534|gb|EKK19072.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii IS-251]
gi|408695229|gb|EKL40785.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii OIFC180]
gi|408699022|gb|EKL44507.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii OIFC098]
gi|408709499|gb|EKL54745.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii Naval-83]
gi|409986391|gb|EKO42585.1| putative ferredoxin [Acinetobacter baumannii AC30]
gi|410390555|gb|EKP42938.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii OIFC111]
gi|410405001|gb|EKP57054.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii Canada BC1]
gi|410412889|gb|EKP64737.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii Naval-82]
gi|425492878|gb|EKU59130.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii WC-348]
gi|425493892|gb|EKU60116.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii WC-487]
gi|425498792|gb|EKU64858.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii Naval-113]
gi|444752524|gb|ELW77208.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii WC-A-92]
gi|444764611|gb|ELW88924.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii AA-014]
gi|444778068|gb|ELX02087.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii OIFC338]
gi|444778270|gb|ELX02288.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii OIFC047]
gi|444779033|gb|ELX03028.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii Naval-78]
gi|444783032|gb|ELX06894.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii Naval-57]
gi|452954290|gb|EME59694.1| ferredoxin [Acinetobacter baumannii MSP4-16]
Length = 101
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 54/115 (46%), Gaps = 15/115 (13%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W+ V + + E + + +G+ I + + + FAIEN P ++ L+ +D
Sbjct: 2 SWISVCQQGDVSEDEPKAVEVEGKKIGVFFVDENYFAIENVCP----HAYALLTEGFIED 57
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
+ CP E+ FD++TG ++ P L +PV+ + ++I I++
Sbjct: 58 QTVECPLHEAIFDIQTGELKS-----------GPGCRNLCTYPVRVEGQDIQIQL 101
>gi|172038496|ref|YP_001804997.1| putative CAB/ELIP/HLIP family protein [Cyanothece sp. ATCC 51142]
gi|354554159|ref|ZP_08973464.1| Chlorophyll A-B binding protein [Cyanothece sp. ATCC 51472]
gi|171699950|gb|ACB52931.1| putative CAB/ELIP/HLIP family protein [Cyanothece sp. ATCC 51142]
gi|353553838|gb|EHC23229.1| Chlorophyll A-B binding protein [Cyanothece sp. ATCC 51472]
Length = 58
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 28/39 (71%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN +E +NG+AA +GFLL+L E LTG+GLL G
Sbjct: 19 FGFNDYAERLNGRAAMVGFLLILVIEYLTGQGLLSWLGL 57
>gi|262279951|ref|ZP_06057736.1| Rieske protein [Acinetobacter calcoaceticus RUH2202]
gi|262260302|gb|EEY79035.1| Rieske protein [Acinetobacter calcoaceticus RUH2202]
Length = 101
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 54/115 (46%), Gaps = 15/115 (13%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W+ + + + E + I +G+ I + + + FAIEN P ++ L+ +D
Sbjct: 2 SWISICQQGDVSEDEPKAIEIEGKKIGVFFVDENYFAIENVCP----HAYALLTEGFIED 57
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
+ CP E+ FD++TG ++ P L +PV+ + ++I I++
Sbjct: 58 QTVECPLHEAIFDIQTGELKS-----------GPGCRNLCTYPVRVEGQDIQIQL 101
>gi|331697984|ref|YP_004334223.1| Rieske (2Fe-2S) domain-containing protein [Pseudonocardia
dioxanivorans CB1190]
gi|326952673|gb|AEA26370.1| Rieske (2Fe-2S) iron-sulfur domain protein [Pseudonocardia
dioxanivorans CB1190]
Length = 340
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 87 GGENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKL 146
G WV V + LP G ++ +G ++L DEV+A+++ +++ GL++
Sbjct: 207 GPNRWVKAVEEADLPDGATTGVVVEGRQVVLHRAGDEVYALDDLC----SHAGGLLSRGE 262
Query: 147 TQDGCIVCPTTESTFDLRTGAV 168
D I CP ES FDLR G +
Sbjct: 263 VVDCVISCPLHESLFDLRDGHI 284
>gi|443476766|ref|ZP_21066655.1| CAB/ELIP/HLIP-related protein [Pseudanabaena biceps PCC 7429]
gi|443018232|gb|ELS32520.1| CAB/ELIP/HLIP-related protein [Pseudanabaena biceps PCC 7429]
Length = 57
Score = 46.2 bits (108), Expect = 0.019, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 248 GFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFLD 287
GFN +E +NG+AA IGF++ + EL+TGKGLL G +D
Sbjct: 16 GFNTYAERLNGRAAMIGFIIAVAIELVTGKGLLAWLGLID 55
>gi|335999374|gb|AEH76924.1| Rieske 2Fe-2S family protein [Bradyrhizobium sp. JS329]
Length = 111
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 15/116 (12%)
Query: 88 GENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLT 147
G +WV V L+ +PKGE R ++ DG I + + FA +N G L L
Sbjct: 3 GSDWVAVAGLADVPKGEIREVLFDGGVIAIAHTESGFFAFDNNCAHMGV---SLAQGALC 59
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIR 203
D ++CP + ++DL+T + YP A +FP+K + +R
Sbjct: 60 GD-VVICPLHKWSYDLKTAVMT--YPQ---------AGRPFSVFPLKIVNDQLLVR 103
>gi|358637793|dbj|BAL25090.1| ferredoxin protein [Azoarcus sp. KH32C]
Length = 110
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 22/118 (18%)
Query: 89 ENWVPVVPL-SALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKL 146
E WV V P+ LP G R V ++DG ++ + +E A+E+R E S GL++
Sbjct: 2 ETWVDVCPVGEILPGGVRVVELEDGRSVAVFRVGNEYHAVEDRCSHEDENLSWGLVH--- 58
Query: 147 TQDGC-IVCPTTESTFDLRTGAVRDWYPNNPVLRALT-PALSTLYIFPVKTDEKNIYI 202
GC + CP + F L TG AL+ PA + +FPV+ E + +
Sbjct: 59 ---GCEVTCPRHGARFSLLTG------------EALSPPAYEPVAVFPVRVQEGKVQV 101
>gi|85704278|ref|ZP_01035381.1| hypothetical protein ROS217_14806 [Roseovarius sp. 217]
gi|85671598|gb|EAQ26456.1| hypothetical protein ROS217_14806 [Roseovarius sp. 217]
Length = 109
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 20/115 (17%)
Query: 90 NWVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
+W+ + P+S +P +G R++ G + DEVFA + P +G SEG+++ +
Sbjct: 2 SWIDIGPVSDIPLRGARKIKTAQGCVAVFRTGPDEVFAATDSCPHKGGPLSEGIVHGQ-- 59
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
+ CP FDL TG + W + +++ IFPV+ E ++I
Sbjct: 60 ---SVTCPLHNWVFDLNTG--QAWGED-----------ASITIFPVQVREGRVWI 98
>gi|83309631|ref|YP_419895.1| ferredoxin subunits of nitrite reductase and ring-hydroxylating
dioxygenase [Magnetospirillum magneticum AMB-1]
gi|82944472|dbj|BAE49336.1| Ferredoxin subunits of nitrite reductase and ring-hydroxylating
dioxygenase [Magnetospirillum magneticum AMB-1]
Length = 111
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 89 ENWVPVVPLSALPK-GERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKL 146
++W+ + + +P+ G R V G+ + DE+FA+ NR P +G SEG++ K+
Sbjct: 2 QDWIKIGRVEDIPRLGARTVQTDKGDIAVFRTRDDEIFALFNRCPHKGGPLSEGIVTGKV 61
Query: 147 TQDGCIVCPTTESTFDLRTG 166
+VCP T DL TG
Sbjct: 62 -----VVCPLHSWTIDLETG 76
>gi|325109892|ref|YP_004270960.1| hypothetical protein Plabr_3341 [Planctomyces brasiliensis DSM
5305]
gi|324970160|gb|ADY60938.1| protein of unknown function DUF59 [Planctomyces brasiliensis DSM
5305]
Length = 250
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 15/113 (13%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDG 150
W + +S L +R +I D LL+ KD ++ +E+ +G + L + ++ DG
Sbjct: 9 WERIASISELEGTDRVSVIVDDTPALLIQDKDSLYVVEDVCTHDG---QPLTDGEIV-DG 64
Query: 151 CIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIR 203
I CP + FD+ TGAVR PA + +F V+ + IY R
Sbjct: 65 SIECPRHGAQFDIATGAVR-----------CMPATEPIRVFDVENRDGEIYAR 106
>gi|159472721|ref|XP_001694493.1| predicted protein [Chlamydomonas reinhardtii]
gi|158276717|gb|EDP02488.1| predicted protein [Chlamydomonas reinhardtii]
Length = 214
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 90 NWVPVVPLSALPKGERRVIIQ---DGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKL 146
NW P+ LS ++R I + + + ++L Y+D ++A S A Y LI+AK+
Sbjct: 88 NWFPLAKLSDFAGEKKRKICELKGNKQVVVLHQYQDTIYATNAYSTA---YQYPLIDAKI 144
Query: 147 TQDG----CIVCPTTESTFDLRTGAVRDWYPNN 175
+DG I P + +DL+TG V W P++
Sbjct: 145 -EDGPEGPTITTPLDGTIYDLKTGKVIKWVPSD 176
>gi|423207586|ref|ZP_17194142.1| hypothetical protein HMPREF1168_03777 [Aeromonas veronii AMC34]
gi|404620653|gb|EKB17550.1| hypothetical protein HMPREF1168_03777 [Aeromonas veronii AMC34]
Length = 102
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 53/116 (45%), Gaps = 17/116 (14%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSP-AEGAYSEGLINAKLTQ 148
+W+PV LSA+ GE + +G+ + + + ++ AIE+ P A SEG + + +
Sbjct: 2 SWMPVCKLSAISDGEHLALNVEGKAVGIFMIEGQLHAIEDICPHAYALLSEGFVEGRTVE 61
Query: 149 DGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
CP E+ FD+ TG ++ P L + V+ + ++ + M
Sbjct: 62 -----CPLHEAIFDIPTGKLQS-----------GPGCRDLNTYEVRVEGDDVLLHM 101
>gi|145594741|ref|YP_001159038.1| Rieske (2Fe-2S) domain-containing protein [Salinispora tropica
CNB-440]
gi|145304078|gb|ABP54660.1| Rieske (2Fe-2S) domain protein [Salinispora tropica CNB-440]
Length = 106
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 62/115 (53%), Gaps = 19/115 (16%)
Query: 90 NWVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLT 147
++V V P++ALP +G +V ++ G + ++ + +V+A+++R S AE + SEG +
Sbjct: 2 DFVKVCPVTALPAEGAFKVRVE-GRAVAVVRSRGQVYALDDRCSHAEVSLSEGEV----- 55
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
DG I C S FDLR G P NP PA + + V+ ++ ++YI
Sbjct: 56 YDGTIECWLHGSCFDLRNGE-----PTNP------PATRPIDTYRVRVEDGDVYI 99
>gi|386847610|ref|YP_006265623.1| Cytochrome b-c1 complex subunit Rieske [Actinoplanes sp. SE50/110]
gi|359835114|gb|AEV83555.1| Cytochrome b-c1 complex subunit Rieske [Actinoplanes sp. SE50/110]
Length = 290
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 17/118 (14%)
Query: 89 ENWVPVVPLSALPKGERRVIIQDGETILLLWYK--DEVFAIENRSPAE-GAYSEGLINAK 145
E W V L+++P ERR +++ + +L Y+ D V A+ R E G EG +
Sbjct: 185 EEWTEVCSLASVP--ERRTVVRLAGDVPVLLYRIGDRVSALVERCGHETGPLGEGDVTGA 242
Query: 146 LTQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIR 203
D C+VCP STF L GAV PA + + PV+ + + IR
Sbjct: 243 -GWDACVVCPWHGSTFRLADGAV-----------VHGPAANNQPVIPVRVQDGRVEIR 288
>gi|445439247|ref|ZP_21441584.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii OIFC021]
gi|444752201|gb|ELW76890.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii OIFC021]
Length = 101
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 54/115 (46%), Gaps = 15/115 (13%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W+ V + + E + + +G+ I + + + FAIEN P ++ L+ +D
Sbjct: 2 SWISVCQQGDVSEDEPKAVEVEGKKIGVFFVDENYFAIENVCP----HAYALLTEGFIED 57
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
+ CP E+ FD++TG ++ P L +PV+ + ++I I++
Sbjct: 58 QTVECPLHEAIFDIQTGELKS-----------GPGCRNLCRYPVRVEGQDIQIQL 101
>gi|114320854|ref|YP_742537.1| assimilatory nitrite reductase (NAD(P)H) small subunit
[Alkalilimnicola ehrlichii MLHE-1]
gi|114227248|gb|ABI57047.1| assimilatory nitrite reductase (NAD(P)H) small subunit
[Alkalilimnicola ehrlichii MLHE-1]
Length = 132
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 19/119 (15%)
Query: 89 ENWVPVVPLSALPKGERRVIIQ-DGETILLLWYKDE-VFAIENRSPAEGAYSEGLINAKL 146
E+W+P+ L +P+ RV+ + +G+ I + D+ +FAI NR P +G G ++ L
Sbjct: 18 EDWLPIGHLDDIPRQGARVVARPEGDDIAIFRTADDALFAIGNRCPHQG----GPLDQGL 73
Query: 147 TQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEK-NIYIRM 204
+ CP L G A+ P + FP++ D++ N+Y+R+
Sbjct: 74 VHGHRVTCPLHGWRIQLEQG------------EAVAPDQGCVPRFPIRRDDRGNLYVRL 120
>gi|420251177|ref|ZP_14754364.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Burkholderia sp. BT03]
gi|398058526|gb|EJL50419.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Burkholderia sp. BT03]
Length = 106
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 15/116 (12%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+WV V + P G R + DG + +AIEN P +G G++ +
Sbjct: 3 DWVDVAAIEDFPAGAVRSVEVDGAQFAVFNVDGTCYAIENICPHDG----GILTGGTVEG 58
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
++CP + F +RTG V PA + +FPV+ + +R E
Sbjct: 59 DVVICPRHGARFCIRTGKV-----------LAPPAYEDVVVFPVRIQAGVVQVRDE 103
>gi|152965295|ref|YP_001361079.1| Rieske (2Fe-2S) domain-containing protein [Kineococcus
radiotolerans SRS30216]
gi|151359812|gb|ABS02815.1| Rieske (2Fe-2S) domain protein [Kineococcus radiotolerans SRS30216]
Length = 106
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 94 VVPLSALPKGERRVIIQDGETILLLWYKD-EVFAIENRSP-AEGAYSEGLINAKLTQDGC 151
V P S LP GE R + DG+ + L ++ V A++ P A G ++G ++ +G
Sbjct: 11 VCPASELPFGEGRTYVVDGQQVALFRHRSGRVSAVQAACPHAGGPLADGQVD-----EGV 65
Query: 152 IVCPTTESTFDLRTG 166
+VCP + FDLRTG
Sbjct: 66 VVCPLHLNAFDLRTG 80
>gi|335425085|ref|ZP_08554076.1| Rieske (2Fe-2S) domain-containing protein [Salinisphaera
shabanensis E1L3A]
gi|334886761|gb|EGM25108.1| Rieske (2Fe-2S) domain-containing protein [Salinisphaera
shabanensis E1L3A]
Length = 107
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 15/106 (14%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W V + +P + D E I + + E FAIE+R ++ +G + ++
Sbjct: 5 DWTAVARVGEIPDQQCLRCDIDDEPIAVYNLRGEYFAIEDRC----SHDDGELADGWVEN 60
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKT 195
GC VCP + FD+RTG V PA ++ FP++
Sbjct: 61 GCAVCPRHGARFDIRTGRV-----------TAPPAYEDIHSFPLRV 95
>gi|218659974|ref|ZP_03515904.1| putative 2Fe-2S Rieske nitrite reductase small subunit [Rhizobium
etli IE4771]
Length = 111
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 19/118 (16%)
Query: 90 NWVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
NWV + +S +P +G R V G+ + ++EVFAIE+ P +G S+G+++AK
Sbjct: 4 NWVAIGDISDIPLRGARCVKTPQGKIAVFRTAENEVFAIEDHCPHKGGPLSQGIVHAK-- 61
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
+ CP L TG +AL + PV+ ++ ++I +E
Sbjct: 62 ---AVTCPLHNWVISLETG------------KALGADDGAVRTIPVRNEDGALFIALE 104
>gi|448738737|ref|ZP_21720758.1| ferredoxin domain-containing protein [Halococcus thailandensis JCM
13552]
gi|445801123|gb|EMA51467.1| ferredoxin domain-containing protein [Halococcus thailandensis JCM
13552]
Length = 581
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 68/160 (42%), Gaps = 21/160 (13%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLTQD 149
+V V LS L R+V+ G I L ++ EV+A++NR P G + G + +D
Sbjct: 8 YVQVASLSELEDEGRQVVSSGGRPIALFHHEGEVYAVDNRCPHMGFPLTRGTV-----ED 62
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEGGAS 209
G + C + F+L G D + ++ + FP + D +Y+ +
Sbjct: 63 GILTCHWHHARFELAEGDTFDLFADD------------VQTFPTEIDNGEVYLDPDPEPD 110
Query: 210 SDASAEIVFSGKAQPGVTATDVNIEEVRMVVDEDLEGFGF 249
+ F + G+ D+++ + ++ D EG GF
Sbjct: 111 VPPATR--FRNRLADGLE-EDISLVMAKSIIGLDEEGEGF 147
>gi|254295127|ref|YP_003061150.1| nitrite reductase (NAD(P)H) small subunit [Hirschia baltica ATCC
49814]
gi|254043658|gb|ACT60453.1| nitrite reductase (NAD(P)H), small subunit [Hirschia baltica ATCC
49814]
Length = 110
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 19/119 (15%)
Query: 90 NWVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENRSP-AEGAYSEGLINAKLT 147
+W+ + + +P +G RR II+ E L EV+AI+N P +G +EG+++
Sbjct: 9 DWIDLCAIEDIPLQGSRRAIIRGREIGLFRTMASEVYAIDNACPHKKGPLTEGIVH---- 64
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEG 206
D + CP FDL++G A P + V+ + ++I++EG
Sbjct: 65 -DCSVTCPLHNWVFDLKSG------------EATGPDEGRVQTHAVEIRDGRVFIQIEG 110
>gi|417551180|ref|ZP_12202258.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii Naval-18]
gi|400385635|gb|EJP48710.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii Naval-18]
Length = 101
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 54/115 (46%), Gaps = 15/115 (13%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W+ V + + E + + +G+ I + + + FAIEN P ++ L+ +D
Sbjct: 2 SWISVCQQGDVSEDEPKAVEVEGKKIGVFFVDENYFAIENVCP----HAYALLTEGFIED 57
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
+ CP E+ +D++TG ++ P L +PV+ + ++I I++
Sbjct: 58 QTVECPLHEAIYDIQTGELKS-----------GPGCRNLCTYPVRVEGQDIQIQL 101
>gi|354611847|ref|ZP_09029803.1| Rieske (2Fe-2S) iron-sulfur domain protein [Halobacterium sp. DL1]
gi|353196667|gb|EHB62169.1| Rieske (2Fe-2S) iron-sulfur domain protein [Halobacterium sp. DL1]
Length = 586
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 18/111 (16%)
Query: 93 PVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEG-AYSEGLINAKLTQDGC 151
PV + L + R V+ +DG+ I L ++ EV+A++NR P G + G ++ DG
Sbjct: 10 PVASRAELDEEGRMVVTEDGQAIALFSHEGEVYAVDNRCPHMGFPLTRGTLD-----DGV 64
Query: 152 IVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
+ C + F+L G D P + FPV+ + +Y+
Sbjct: 65 LTCHWHHARFELEEGDTFD------------PWADDVQTFPVEIRDGEVYL 103
>gi|46200801|ref|ZP_00207850.1| COG2146: Ferredoxin subunits of nitrite reductase and
ring-hydroxylating dioxygenases [Magnetospirillum
magnetotacticum MS-1]
Length = 111
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 89 ENWVPVVPLSALPK-GERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKL 146
++W+ + ++ +P+ G R V G+ + D++FA+ NR P +G SEG+++ +
Sbjct: 2 QDWIKIGHMNDIPRLGARTVQTAKGDVAVFRTSDDDIFALFNRCPHKGGPLSEGIVSGHV 61
Query: 147 TQDGCIVCPTTESTFDLRTG 166
+VCP T DL TG
Sbjct: 62 -----VVCPLHSWTIDLETG 76
>gi|67922854|ref|ZP_00516352.1| CAB/ELIP/HLIP-related protein [Crocosphaera watsonii WH 8501]
gi|67855278|gb|EAM50539.1| CAB/ELIP/HLIP-related protein [Crocosphaera watsonii WH 8501]
Length = 58
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 27/39 (69%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN +E +NG+AA +GFLL+L E TG+GLL G
Sbjct: 19 FGFNDYAERLNGRAAMVGFLLVLAIEYFTGQGLLSWLGL 57
>gi|443315620|ref|ZP_21045101.1| Chlorophyll A-B binding protein [Leptolyngbya sp. PCC 6406]
gi|442784768|gb|ELR94627.1| Chlorophyll A-B binding protein [Leptolyngbya sp. PCC 6406]
Length = 70
Score = 45.1 bits (105), Expect = 0.044, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 235 EVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 280
E ++ VD D + FGFNV +E +NG+ A +GF+ + FE+LTG G++
Sbjct: 20 EPKVYVD-DSQQFGFNVYAERMNGRLAMVGFISAIAFEVLTGHGVI 64
>gi|424894755|ref|ZP_18318329.1| NAD(P)H-dependent nitrite reductase, small subunit [Rhizobium
leguminosarum bv. trifolii WSM2297]
gi|393178982|gb|EJC79021.1| NAD(P)H-dependent nitrite reductase, small subunit [Rhizobium
leguminosarum bv. trifolii WSM2297]
Length = 109
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 19/118 (16%)
Query: 90 NWVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
NW+ + +S +P +G R V G+ + ++EVFAIE+ P +G S+G+++AK
Sbjct: 2 NWISIGDISEIPLRGARCVKTPQGKIAVFRTAENEVFAIEDHCPHKGGPLSQGIVHAK-- 59
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
+ CP L TG +AL + PV+ ++ ++I +E
Sbjct: 60 ---AVTCPLHNWVISLETG------------KALGADQGEVRTIPVRNEDGALFIALE 102
>gi|357029263|ref|ZP_09091266.1| nitrite reductase (NAD(P)H), small subunit [Mesorhizobium amorphae
CCNWGS0123]
gi|355535878|gb|EHH05160.1| nitrite reductase (NAD(P)H), small subunit [Mesorhizobium amorphae
CCNWGS0123]
Length = 109
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 19/125 (15%)
Query: 90 NWVPVVPLSALPK-GERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
NW+ + LS +P+ G R V +G+ + D+V+AI++ P +G S+G+++
Sbjct: 2 NWIAIGTLSDIPRRGARCVATPEGKIAVFRTVDDQVYAIDDHCPHKGGPLSQGIVHG--- 58
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEGG 207
+ CP L TG +AL + PV+ D + ++I +E
Sbjct: 59 --AAVTCPLHNWVISLETG------------KALGADEGVVRTIPVRIDGERLFIALEAL 104
Query: 208 ASSDA 212
AS A
Sbjct: 105 ASRAA 109
>gi|416386758|ref|ZP_11684969.1| CAB/ELIP/HLIP-related protein [Crocosphaera watsonii WH 0003]
gi|357264653|gb|EHJ13512.1| CAB/ELIP/HLIP-related protein [Crocosphaera watsonii WH 0003]
Length = 58
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 27/39 (69%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN +E +NG+AA +GFLL+L E TG+GLL G
Sbjct: 19 FGFNDYAERLNGRAAMVGFLLVLAIEYFTGQGLLSWLGL 57
>gi|239817256|ref|YP_002946166.1| Rieske (2Fe-2S) domain-containing protein [Variovorax paradoxus
S110]
gi|239803833|gb|ACS20900.1| Rieske (2Fe-2S) domain protein [Variovorax paradoxus S110]
Length = 105
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 45/113 (39%), Gaps = 15/113 (13%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W+ V L E + + G + L DE FA ++ ++ L++ +D
Sbjct: 2 DWIKVASAQELSNDEAKTVDVAGYGVALYRIDDEFFATDSMCT----HATALLSEGYVED 57
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
GC+ CP + FD+RTG P L VK + +IY+
Sbjct: 58 GCVECPLHQGRFDIRTGKA-----------MCAPVTVDLRTHAVKREGDHIYV 99
>gi|297561903|ref|YP_003680877.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Nocardiopsis
dassonvillei subsp. dassonvillei DSM 43111]
gi|296846351|gb|ADH68371.1| Rieske (2Fe-2S) iron-sulfur domain protein [Nocardiopsis
dassonvillei subsp. dassonvillei DSM 43111]
Length = 111
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 18/117 (15%)
Query: 91 WVPVVPLSALPKGERRVIIQDGET-ILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLTQ 148
WV V LS +P+ + D ET I L+ + EV+A+ + S AE SEG + +
Sbjct: 7 WVKVAELSEIPEEGALGVETDDETPIALVRSEGEVYAVRDVCSHAEVRLSEGEV-----E 61
Query: 149 DGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
DG I C S FDLR+GA P NP PA + + VK D +++ + ++
Sbjct: 62 DGTIECWLHGSCFDLRSGA-----PINP------PATQAVPTYDVKIDGEDVLVSLD 107
>gi|337266569|ref|YP_004610624.1| nitrite reductase (NAD(P)H), small subunit [Mesorhizobium
opportunistum WSM2075]
gi|336026879|gb|AEH86530.1| nitrite reductase (NAD(P)H), small subunit [Mesorhizobium
opportunistum WSM2075]
Length = 109
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 19/125 (15%)
Query: 90 NWVPVVPLSALPK-GERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
NW+ + LS +P+ G R V +G+ + D+V+AI++ P +G S+G+++
Sbjct: 2 NWIAIGTLSDIPRRGARCVATPEGKVAVFRTADDQVYAIDDHCPHKGGPLSQGIVHG--- 58
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEGG 207
+ CP L TG +AL + PVK + ++++I +E
Sbjct: 59 --AAVTCPLHNWVISLETG------------KALGADEGAVRTIPVKREGEHLFIALEAL 104
Query: 208 ASSDA 212
AS A
Sbjct: 105 ASRAA 109
>gi|449016262|dbj|BAM79664.1| Rieske iron-sulfur cluster containing protein [Cyanidioschyzon
merolae strain 10D]
Length = 181
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 16/127 (12%)
Query: 89 ENWVPVVPLSALPKGERRVIIQDGETILLLWYKD-EVFAIENRSPAEGAYSEGL---INA 144
E WV +VP S L GE R + + +L+ +D VFA + Y L ++
Sbjct: 38 EAWVRLVPTSDLQPGELRTVTVASQLVLVAVDQDGSVFATQG-------YCSHLAVPLDT 90
Query: 145 KLTQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPAL---STLYIFPVKTDEKNI- 200
DG + C S+FDL+TG V W P+L L L + + ++PV+ + I
Sbjct: 91 GSIGDGVLTCSQHRSSFDLKTGEVISWCTFPPILGPLLGKLQPPTPISVYPVRENAGYIE 150
Query: 201 -YIRMEG 206
Y++++
Sbjct: 151 AYLQVDA 157
>gi|1245155|gb|AAC44529.1| biphenyl dioxygenase ferredoxin [Pandoraea pnomenusa]
Length = 109
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 26/120 (21%)
Query: 94 VVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR------SPAEGAYSEGLINAKLT 147
V LS +P+GE R + + + + + ++FA ++R S EG Y +G I
Sbjct: 6 VCSLSEVPRGEARRVESGDKAVAIFNVEGDLFATQDRCTHGDWSLGEGGYLDGDI----- 60
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEGG 207
I C F +RTG V+ P P L IFP++ + ++Y+ EGG
Sbjct: 61 ----IECSLHMGKFCVRTGKVKSPPPCQP-----------LEIFPIRFEGDDVYVDFEGG 105
>gi|337268860|ref|YP_004612915.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Mesorhizobium opportunistum WSM2075]
gi|336029170|gb|AEH88821.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Mesorhizobium opportunistum WSM2075]
Length = 514
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 15/109 (13%)
Query: 95 VPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVC 154
+ LS LP G V DGE +LL+ EVFA+ A+ + G + L + + C
Sbjct: 17 IALSDLPDGGNLVGHSDGERVLLVRRGTEVFAV----GAKCTHYGGPLVDGLVVENTVRC 72
Query: 155 PTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIR 203
P + FDLRTG LRA PA + L + V+ + I++R
Sbjct: 73 PWHHACFDLRTG---------EALRA--PAFNPLTCWSVELRDDRIFVR 110
>gi|159044217|ref|YP_001533011.1| assimilatory nitrite reductase [NAD(P)H] small subunit
[Dinoroseobacter shibae DFL 12]
gi|157911977|gb|ABV93410.1| assimilatory nitrite reductase [NAD(P)H], small subunit
[Dinoroseobacter shibae DFL 12]
Length = 113
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 89 ENWVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKL 146
++W+ + LS +P +G R V G + DEVFA++NR P +G SEG+++ K
Sbjct: 3 QDWIDIGELSDIPARGARVVRTAVGCVAVFRTGSDEVFALQNRCPHKGGPLSEGIVHGK- 61
Query: 147 TQDGCIVCPTTESTFDLRTG 166
+ CP F L TG
Sbjct: 62 ----SVTCPLHNWVFSLETG 77
>gi|428781289|ref|YP_007173075.1| Chlorophyll A-B binding protein [Dactylococcopsis salina PCC 8305]
gi|428695568|gb|AFZ51718.1| Chlorophyll A-B binding protein [Dactylococcopsis salina PCC 8305]
Length = 56
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 27/40 (67%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
FGFN +E +NG+AA IGF+ LL E TGKG+L G L
Sbjct: 17 FGFNKYAERLNGRAAMIGFVSLLLVEFFTGKGMLSWLGLL 56
>gi|421589285|ref|ZP_16034451.1| nitrite reductase (NAD(P)H) protein, small subunit [Rhizobium sp.
Pop5]
gi|403705808|gb|EJZ21283.1| nitrite reductase (NAD(P)H) protein, small subunit [Rhizobium sp.
Pop5]
Length = 109
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 19/118 (16%)
Query: 90 NWVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
NW+ + +S +P +G R V G+ + ++EVFAIE+ P +G S+G+++AK
Sbjct: 2 NWIAIGDISDIPLRGARCVKTPQGKIAVFRTAENEVFAIEDHCPHKGGPLSQGIVHAK-- 59
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
+ CP L TG +AL + PV+ ++ ++I +E
Sbjct: 60 ---AVTCPLHNWVISLETG------------KALGADEGEVRTIPVRNEDGALFIALE 102
>gi|91781128|ref|YP_556335.1| anthranilate dioxygenase ferredoxin subunit(AndAb) [Burkholderia
xenovorans LB400]
gi|91693788|gb|ABE36985.1| Anthranilate dioxygenase ferredoxin subunit(AndAb) [Burkholderia
xenovorans LB400]
Length = 107
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 48/117 (41%), Gaps = 17/117 (14%)
Query: 89 ENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLT 147
+NW + L +GE II + + EVFA+ + S SEG +
Sbjct: 6 DNWQTIGTLDDFTEGEPAAIIAGDRQVAVFRLGGEVFALNDLCSHGHARLSEGYV----- 60
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
+DGC+ CP + D+RTGA R P + FPV+ + + I +
Sbjct: 61 EDGCVECPLHQGLIDIRTGAPR-----------CAPITEPVRTFPVRIVDSRVEIHV 106
>gi|365092825|ref|ZP_09329906.1| dioxygenase ferredoxin reductase component [Acidovorax sp. NO-1]
gi|363415061|gb|EHL22195.1| dioxygenase ferredoxin reductase component [Acidovorax sp. NO-1]
Length = 118
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
W + LP GE + I D I+L D FA + A L K +D
Sbjct: 2 TWHTLCGSDELPVGEMKSFIVDKHKIVLYHLSDGFFATQASCTHTFA---PLARGKQLED 58
Query: 150 GCIVCPTTESTFDLRTGAVRDW 171
+ CP + FD+RTGAV DW
Sbjct: 59 CKVQCPLHRARFDIRTGAVLDW 80
>gi|443322329|ref|ZP_21051354.1| Chlorophyll A-B binding protein [Gloeocapsa sp. PCC 73106]
gi|442787934|gb|ELR97642.1| Chlorophyll A-B binding protein [Gloeocapsa sp. PCC 73106]
Length = 70
Score = 44.3 bits (103), Expect = 0.067, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 235 EVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
E +M VD + FGFN +E ING+ A IGF+ L+ FEL+ +GL+ G L
Sbjct: 20 EPKMYVDST-QQFGFNQYAEKINGRFAMIGFVSLIGFELIAHQGLMTWLGNL 70
>gi|296446956|ref|ZP_06888891.1| nitrite reductase (NAD(P)H), small subunit [Methylosinus
trichosporium OB3b]
gi|296255523|gb|EFH02615.1| nitrite reductase (NAD(P)H), small subunit [Methylosinus
trichosporium OB3b]
Length = 110
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 49/118 (41%), Gaps = 19/118 (16%)
Query: 89 ENWVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKL 146
+W + PL +P +G R V + + DEVFA+ENR P G SEG+++ +
Sbjct: 4 RDWFDIGPLEQIPQRGARIVRTPRRDIAVFRTAGDEVFALENRCPHRGGPLSEGIVHGRK 63
Query: 147 TQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
+ CP DL +G AL FPVK + +YI M
Sbjct: 64 -----VACPLHNWVIDLDSGE------------ALGADHGCARRFPVKLLKGRVYIEM 104
>gi|452965569|gb|EME70590.1| ferredoxin subunits of nitrite reductase and ring-hydroxylating
dioxygenase [Magnetospirillum sp. SO-1]
Length = 111
Score = 44.3 bits (103), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 89 ENWVPVVPLSALPK-GERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKL 146
++W+ + + +P+ G R V G+ + D++FA+ NR P +G SEG++ K+
Sbjct: 2 QDWIKIGRVEDIPRLGARTVHTTKGDIAVFRTSGDDIFALFNRCPHKGGPLSEGIVTGKV 61
Query: 147 TQDGCIVCPTTESTFDLRTG 166
+VCP T DL TG
Sbjct: 62 -----VVCPLHSWTIDLETG 76
>gi|393778374|ref|ZP_10366648.1| 2-hydroxybenzoate 5-hydroxylase ferredoxin [Ralstonia sp. PBA]
gi|392714645|gb|EIZ02245.1| 2-hydroxybenzoate 5-hydroxylase ferredoxin [Ralstonia sp. PBA]
Length = 112
Score = 44.3 bits (103), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 19/119 (15%)
Query: 88 GENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAY-SEGLINAKL 146
G W L +P+GE + G+ + L + E++A + E A+ SEG +
Sbjct: 7 GPGWERAAALDDVPEGEVAGVQVGGQPVALYKVEGELYATHDICSHEHAHLSEGYL---- 62
Query: 147 TQDGC-IVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
DGC I CP ++ FD+RTG PA + ++PV+ ++I+I +
Sbjct: 63 --DGCEIECPLHQARFDIRTGQAM-----------CKPATGPVAVYPVRIVGQDIFINL 108
>gi|392373931|ref|YP_003205764.1| nirD (nasD) assimilatory nitrite reductase, small subunit (Rieske
(2Fe-2S) domain) protein [Candidatus Methylomirabilis
oxyfera]
gi|258591624|emb|CBE67925.1| Putative nirD (nasD) assimilatory nitrite reductase, small subunit
(Rieske (2Fe-2S) domain) protein [Candidatus
Methylomirabilis oxyfera]
Length = 107
Score = 44.3 bits (103), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 89 ENWVPVVPLSALPKGERRVIIQDGETILLLWYKD-EVFAIENRSPAEG-AYSEGLINAKL 146
E VP+ P+ A+P G+ + D I + ++ ++FA +N P G + ++G+I
Sbjct: 9 EIVVPLGPIDAIPLGQGCTYVIDDCAIAVFRQRNGDLFATQNACPHRGGSLADGIIG--- 65
Query: 147 TQDGCIVCPTTESTFDLRTGAVRDW 171
DG ++CP FDL+TGA D
Sbjct: 66 --DGKVICPLHARQFDLKTGASADC 88
>gi|443328437|ref|ZP_21057034.1| Chlorophyll A-B binding protein [Xenococcus sp. PCC 7305]
gi|442791891|gb|ELS01381.1| Chlorophyll A-B binding protein [Xenococcus sp. PCC 7305]
Length = 56
Score = 44.3 bits (103), Expect = 0.072, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 26/39 (66%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN +E +NG+AA IGF L + E LTGKGLL G
Sbjct: 17 FGFNKYAERLNGRAAMIGFTLAIVIEYLTGKGLLAWLGL 55
>gi|424890658|ref|ZP_18314257.1| NAD(P)H-dependent nitrite reductase, small subunit [Rhizobium
leguminosarum bv. trifolii WSM2012]
gi|393172876|gb|EJC72921.1| NAD(P)H-dependent nitrite reductase, small subunit [Rhizobium
leguminosarum bv. trifolii WSM2012]
Length = 109
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 19/118 (16%)
Query: 90 NWVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
NW+ + +S +P +G R V G+ + ++EVFAIE+ P +G S+G+++AK
Sbjct: 2 NWISIGDISEIPLRGARCVKTPQGKIAVFRTAENEVFAIEDHCPHKGGPLSQGIVHAK-- 59
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
+ CP L TG +AL + PV+ + ++I +E
Sbjct: 60 ---AVTCPLHNWVISLETG------------KALGADQGEVRTIPVRNENGALFIALE 102
>gi|315425093|dbj|BAJ46765.1| ferredoxin [Candidatus Caldiarchaeum subterraneum]
gi|374854914|dbj|BAL57784.1| ferredoxin [uncultured crenarchaeote]
Length = 85
Score = 44.3 bits (103), Expect = 0.073, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 15/97 (15%)
Query: 106 RVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRT 165
RV+ GE +L+L +K ++FA+ N E Y+E L+N L DG I CP S F L T
Sbjct: 2 RVVEAGGEQVLVLRHKGKLFAVSNICTHE--YAE-LVNG-LVVDGTITCPVHLSRFRLET 57
Query: 166 GAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
G V NP PA L + + E I++
Sbjct: 58 GEVL-----NP------PATKNLKTYKIHVLEGEIFV 83
>gi|190891478|ref|YP_001978020.1| nitrite reductase (NAD(P)H) protein, small subunit [Rhizobium etli
CIAT 652]
gi|190696757|gb|ACE90842.1| nitrite reductase (NAD(P)H) protein, small subunit [Rhizobium etli
CIAT 652]
Length = 109
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 19/118 (16%)
Query: 90 NWVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
NW+ + +S +P +G R V G+ + ++EVFAIE+ P +G S+G+++AK
Sbjct: 2 NWIAIGDISDIPLRGARCVKTPQGKIAVFRTAENEVFAIEDHCPHKGGPLSQGIVHAK-- 59
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
+ CP L TG +AL + PV+ ++ ++I +E
Sbjct: 60 ---AVTCPLHNWVISLETG------------KALGADEGEVRTIPVRNEDGALFIALE 102
>gi|326795659|ref|YP_004313479.1| Rieske (2Fe-2S) iron-sulfur domain [Marinomonas mediterranea MMB-1]
gi|326546423|gb|ADZ91643.1| Rieske (2Fe-2S) iron-sulfur domain [Marinomonas mediterranea MMB-1]
Length = 104
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 55/117 (47%), Gaps = 17/117 (14%)
Query: 89 ENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQ 148
ENW+ + L +P+ + I +G I L +D VFA +N ++ L++ +
Sbjct: 3 ENWIKTIQLDDIPEDDVIGINVEGHPIALYKVEDGVFATDNVC----SHGRALLSDGFLE 58
Query: 149 DGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALT-PALSTLYIFPVKTDEKNIYIRM 204
DG I CP + F +++G +A++ P + +P KT+ ++I++
Sbjct: 59 DGEIECPLHQGRFCIKSG------------KAMSEPLTHDITAYPTKTEGDQVFIKL 103
>gi|22299459|ref|NP_682706.1| CAB/ELIP/HLIP superfamily protein [Thermosynechococcus elongatus
BP-1]
gi|22295642|dbj|BAC09468.1| CAB/ELIP/HLIP superfamily protein [Thermosynechococcus elongatus
BP-1]
Length = 57
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
+GFN +E ING+AA +G + LL +E TG+GLL G+L
Sbjct: 18 YGFNTFAERINGRAAMVGLVALLLWEYWTGEGLLHWLGWL 57
>gi|308809409|ref|XP_003082014.1| ferredoxin component (ISS) [Ostreococcus tauri]
gi|116060481|emb|CAL55817.1| ferredoxin component (ISS) [Ostreococcus tauri]
Length = 127
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 104 ERRVIIQ-DGETILLLW-YKDEVFAIENRSPAEGAYSEG---LINAKLTQDGCIVCPTTE 158
+RR +++ DG LL+ + +VFA+ N+ P G +G L++A + +DG + C
Sbjct: 16 KRRAVVEIDGVGPLLIQEFAGDVFAMSNKCPHLGLSMQGKTALLSATV-EDGKVTCNAHG 74
Query: 159 STFDLRTGA-VRDWYPNNPVL 178
S FD++TGA V +W P P L
Sbjct: 75 SAFDMKTGAPVGEWCPKLPSL 95
>gi|110598045|ref|ZP_01386324.1| Rieske (2Fe-2S) region [Chlorobium ferrooxidans DSM 13031]
gi|110340304|gb|EAT58798.1| Rieske (2Fe-2S) region [Chlorobium ferrooxidans DSM 13031]
Length = 370
Score = 43.9 bits (102), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLTQ 148
+++P++PLS LP+ + + D TI+L Y+ V A+ N EG S+G I
Sbjct: 2 HYIPLIPLSELPENTHKSVRSDKHTIVLFHYEGTVTALGNSCIHEGGDLSQGSIQRLEDG 61
Query: 149 DGCIVCPTTESTFDLRTGAVRDWYPNNPVL 178
+ IVCP + L++G Y + L
Sbjct: 62 ELYIVCPWHGWQYSLKSGKAPQGYRDRQAL 91
>gi|428201033|ref|YP_007079622.1| Chlorophyll A-B binding protein [Pleurocapsa sp. PCC 7327]
gi|427978465|gb|AFY76065.1| Chlorophyll A-B binding protein [Pleurocapsa sp. PCC 7327]
Length = 60
Score = 43.9 bits (102), Expect = 0.086, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 27/39 (69%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN +E +NG+AA IGF+L L E +TGKGLL G
Sbjct: 21 FGFNDYAERLNGRAAMIGFVLTLLIEYITGKGLLAWLGL 59
>gi|189220473|ref|YP_001941113.1| Ferredoxin [Methylacidiphilum infernorum V4]
gi|189187331|gb|ACD84516.1| Ferredoxin [Methylacidiphilum infernorum V4]
Length = 103
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 98 SALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLTQDGCIVCPT 156
S +P+G + +G+ I + YK E FA+++ P EG SEG I ++G + CP
Sbjct: 11 SEIPEGAGKCFDAEGKKIAVFCYKGEYFALDDTCPHEGGPLSEGFI-----ENGEVECPW 65
Query: 157 TESTFDLRTGAV 168
+ F L+TG V
Sbjct: 66 HGARFSLKTGEV 77
>gi|86357411|ref|YP_469303.1| nitrite reductase [NAD(P)H], small subunit protein [Rhizobium etli
CFN 42]
gi|86281513|gb|ABC90576.1| nitrite reductase [NAD(P)H], small subunit protein [Rhizobium etli
CFN 42]
Length = 109
Score = 43.9 bits (102), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 19/118 (16%)
Query: 90 NWVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
NW+ + +S +P +G R V G+ + ++EVFAIE+ P +G S+G+++AK
Sbjct: 2 NWIAIGNISDIPLRGARCVKTPQGKIAVFRTAENEVFAIEDHCPHKGGPLSQGIVHAK-- 59
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
+ CP L TG +AL + PV+ ++ ++I +E
Sbjct: 60 ---AVTCPLHNWVISLETG------------KALGADEGEVRTIPVRNEDGALFIALE 102
>gi|307152335|ref|YP_003887719.1| HLIP; single helix LHC light protein [Cyanothece sp. PCC 7822]
gi|306982563|gb|ADN14444.1| HLIP; single helix LHC light protein [Cyanothece sp. PCC 7822]
Length = 59
Score = 43.9 bits (102), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 27/39 (69%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN +E +NG+AA IGF+L L E +TG+GLL G
Sbjct: 20 FGFNEYAERLNGRAAMIGFVLTLVIEYVTGQGLLSWLGL 58
>gi|218245542|ref|YP_002370913.1| CAB/ELIP/HLIP-like protein [Cyanothece sp. PCC 8801]
gi|257058579|ref|YP_003136467.1| HLIP; single helix LHC light protein [Cyanothece sp. PCC 8802]
gi|218166020|gb|ACK64757.1| CAB/ELIP/HLIP-related protein [Cyanothece sp. PCC 8801]
gi|256588745|gb|ACU99631.1| HLIP; single helix LHC light protein [Cyanothece sp. PCC 8802]
Length = 58
Score = 43.9 bits (102), Expect = 0.090, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 27/39 (69%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN +E +NG+AA +GF+L L E LTG+GLL G
Sbjct: 19 FGFNDYAERLNGRAAMVGFVLTLVIEYLTGQGLLSWLGL 57
>gi|409438122|ref|ZP_11265216.1| Nitrite reductase (NAD(P)H) protein, small subunit [Rhizobium
mesoamericanum STM3625]
gi|408750310|emb|CCM76380.1| Nitrite reductase (NAD(P)H) protein, small subunit [Rhizobium
mesoamericanum STM3625]
Length = 111
Score = 43.9 bits (102), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 19/118 (16%)
Query: 90 NWVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
NW+ + +S +P +G R V G+ + ++EVFAIE+ P +G S+G+++AK
Sbjct: 4 NWISIGDISEIPLRGARCVKTPQGKIAVFRTAENEVFAIEDHCPHKGGPLSQGIVHAK-- 61
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
+ CP L TG +AL + V+ D+ +YI +E
Sbjct: 62 ---AVTCPLHNWVISLETG------------KALGADEGEVPTIAVRNDDGALYIALE 104
>gi|298493069|ref|YP_003723246.1| high light inducible protein ['Nostoc azollae' 0708]
gi|298234987|gb|ADI66123.1| high light inducible protein ['Nostoc azollae' 0708]
Length = 71
Score = 43.9 bits (102), Expect = 0.092, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 235 EVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 280
E ++ VDE + GF +EL+NG+ A IGF+ L+ E+LTG G L
Sbjct: 20 EPKIYVDEQGDHTGFTTYAELLNGRLAMIGFVSLIGLEVLTGHGAL 65
>gi|433648427|ref|YP_007293429.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Mycobacterium smegmatis JS623]
gi|433298204|gb|AGB24024.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Mycobacterium smegmatis JS623]
Length = 120
Score = 43.9 bits (102), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 94 VVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLTQDGC- 151
+ PL+ALP+GE R + D + EVFAI++ + A ++G + +GC
Sbjct: 4 ICPLAALPRGEARRVEADPPIAVFHTDDGEVFAIDDTCTHQDASLADGWL------EGCD 57
Query: 152 IVCPTTESTFDLRTGAV 168
I CP S F+LRTGAV
Sbjct: 58 IECPLHASRFNLRTGAV 74
>gi|428223346|ref|YP_007107516.1| Chlorophyll A-B binding protein [Synechococcus sp. PCC 7502]
gi|427996686|gb|AFY75381.1| Chlorophyll A-B binding protein [Synechococcus sp. PCC 7502]
Length = 54
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 27/40 (67%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
FGFN +E +NG+AA IGFL +L E TGKG+L G L
Sbjct: 15 FGFNSYAERLNGRAAMIGFLTVLVIEFATGKGVLAWLGLL 54
>gi|75909126|ref|YP_323422.1| high light inducible protein [Anabaena variabilis ATCC 29413]
gi|75702851|gb|ABA22527.1| CAB/ELIP/HLIP superfamily [Anabaena variabilis ATCC 29413]
Length = 72
Score = 43.9 bits (102), Expect = 0.099, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 235 EVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 280
E ++ VDE + GF +E++NG+ A IGF+ L+ E+ TGKG+L
Sbjct: 20 EPKVYVDEQGDRTGFTPYAEILNGRLAMIGFISLIALEVFTGKGIL 65
>gi|428774599|ref|YP_007166387.1| CAB/ELIP/HLIP family protein [Cyanobacterium stanieri PCC 7202]
gi|428688878|gb|AFZ48738.1| CAB/ELIP/HLIP-related protein [Cyanobacterium stanieri PCC 7202]
Length = 56
Score = 43.5 bits (101), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 27/40 (67%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
FGFN +E +NG+AA IGFL+ L E TG+GLL G +
Sbjct: 17 FGFNTYAEKLNGRAAMIGFLITLGIEYATGQGLLSWLGLV 56
>gi|428217569|ref|YP_007102034.1| putative CAB/ELIP/HLIP family protein [Pseudanabaena sp. PCC 7367]
gi|427989351|gb|AFY69606.1| putative CAB/ELIP/HLIP family protein [Pseudanabaena sp. PCC 7367]
Length = 57
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFLD 287
FGFN +E +NG+AA IGFL+ + E +TG+GLL G ++
Sbjct: 15 FGFNSYAERLNGRAAMIGFLIAVVIEFVTGQGLLDWLGIIN 55
>gi|417097733|ref|ZP_11959374.1| putative 2Fe-2S Rieske nitrite reductase small subunit [Rhizobium
etli CNPAF512]
gi|327193160|gb|EGE60070.1| putative 2Fe-2S Rieske nitrite reductase small subunit [Rhizobium
etli CNPAF512]
Length = 162
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 19/118 (16%)
Query: 90 NWVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
NW+ + +S +P +G R V G+ + ++EVFAIE+ P +G S+G+++AK
Sbjct: 55 NWIAIGDISDIPLRGARCVKTPQGKIAVFRTAENEVFAIEDHCPHKGGPLSQGIVHAK-- 112
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
+ CP L TG +AL + PV+ ++ ++I +E
Sbjct: 113 ---AVTCPLHNWVISLETG------------KALGADEGEVRTIPVRNEDGALFIALE 155
>gi|254413153|ref|ZP_05026925.1| hypothetical protein MC7420_2313 [Coleofasciculus chthonoplastes
PCC 7420]
gi|196180317|gb|EDX75309.1| hypothetical protein MC7420_2313 [Coleofasciculus chthonoplastes
PCC 7420]
Length = 56
Score = 43.5 bits (101), Expect = 0.10, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 26/39 (66%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN +E +NG+AA IGF+L L E TG+GLL G
Sbjct: 17 FGFNEYAERLNGRAAMIGFVLTLAIEYATGQGLLTWLGL 55
>gi|238025336|ref|YP_002909568.1| putative ferredoxin [Burkholderia glumae BGR1]
gi|237880001|gb|ACR32333.1| putative ferredoxin [Burkholderia glumae BGR1]
Length = 120
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 49/121 (40%), Gaps = 15/121 (12%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDG 150
W +A+ + +I G I L DE+FA +N+ + E ++ D
Sbjct: 5 WTYAAETAAVREQGLTGVIVGGRDIALFAIDDEIFATDNQCT----HGEARLSDGFLLDD 60
Query: 151 CIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEGGASS 210
+ CP + F +RTGA P + + FPV+ + +++R + G +
Sbjct: 61 EVECPLHQGRFSVRTGAA-----------LCAPVTACVKTFPVRIESGRVFVRFDAGLDN 109
Query: 211 D 211
D
Sbjct: 110 D 110
>gi|293605471|ref|ZP_06687853.1| 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit
[Achromobacter piechaudii ATCC 43553]
gi|292816199|gb|EFF75298.1| 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit
[Achromobacter piechaudii ATCC 43553]
Length = 106
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 16/118 (13%)
Query: 89 ENWVPVVPLSAL-PKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLT 147
+ W PV + + P ++ +GE + L DE+ A ++R P A L + L
Sbjct: 2 DTWKPVAQVGDISPDTGTLRVVYEGEAVCLYKLPDEICATQDRCPHGNA---SLADGYL- 57
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
+DG I CP + FD+RTG P P P + L + V+ + +Y++ +
Sbjct: 58 EDGTIECPLHQGVFDIRTGK-----PQCP------PVTTDLRRYEVRVEADTVYLKAQ 104
>gi|428300771|ref|YP_007139077.1| CAB/ELIP/HLIP family protein [Calothrix sp. PCC 6303]
gi|428237315|gb|AFZ03105.1| CAB/ELIP/HLIP-related protein [Calothrix sp. PCC 6303]
Length = 56
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN +E +NG+AA IGFLL++ E +T KG+L G
Sbjct: 17 FGFNYYAERLNGRAAMIGFLLMVVIEYVTDKGVLSWLGL 55
>gi|288917285|ref|ZP_06411653.1| Rieske (2Fe-2S) domain protein [Frankia sp. EUN1f]
gi|288351307|gb|EFC85516.1| Rieske (2Fe-2S) domain protein [Frankia sp. EUN1f]
Length = 107
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 22/116 (18%)
Query: 95 VPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGC-IV 153
VP+ + GE +I DG + + E FA +N P +G+ ++ + GC I+
Sbjct: 8 VPVDWIGPGETATVIVDGFPVAVANVDGEYFAFQNLCPHQGS----VLGGRPLDQGCFII 63
Query: 154 CPTTESTFDLRTGAVRDWYPNNPVLRALTPALS-----TLYIFPVKTDEKNIYIRM 204
CP S +D+RTGA + P+ S L +FP + +++ + I++
Sbjct: 64 CPQHASRYDVRTGA------------CVRPSSSDGFNQDLMVFPTRVEDEVVQIQI 107
>gi|312199085|ref|YP_004019146.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Frankia sp.
EuI1c]
gi|311230421|gb|ADP83276.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia sp. EuI1c]
Length = 107
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 12/111 (10%)
Query: 95 VPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVC 154
+P+ + GE ++ DG + + E FA +N P +G+ G L Q IVC
Sbjct: 8 LPIDFIEPGETTTVMVDGFPVAVANVDGEYFAFQNLCPHQGSKLGG---RSLDQGCFIVC 64
Query: 155 PTTESTFDLRTGA-VRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
PT S +D+R+GA VR P+N L +FPV+ + + I++
Sbjct: 65 PTHASRYDVRSGACVR---PSNS-----DGFNQDLMVFPVRIQDDVVQIQI 107
>gi|186681851|ref|YP_001865047.1| Rieske (2Fe-2S) domain-containing protein [Nostoc punctiforme PCC
73102]
gi|186464303|gb|ACC80104.1| Rieske (2Fe-2S) domain protein [Nostoc punctiforme PCC 73102]
Length = 587
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 53/122 (43%), Gaps = 18/122 (14%)
Query: 84 GGGGGENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLIN 143
G ++++ V L+ + ++ + TI L + + V+AI+NR P G +G
Sbjct: 7 GATKTDDYIRVAQLAEVQAAGSLLVHKQKHTIALFYSNNTVYAIDNRCPHMGFPLQG--- 63
Query: 144 AKLTQDGCIVCPTTESTFDLRTGAVRD-WYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
+DG + CP + FDL +G D W + P FPV+ + +++
Sbjct: 64 -STCKDGIVTCPWHYARFDLASGGTFDSWADDVPC-------------FPVEIRDGEVWV 109
Query: 203 RM 204
+
Sbjct: 110 NL 111
>gi|428207888|ref|YP_007092241.1| ferrochelatase [Chroococcidiopsis thermalis PCC 7203]
gi|428009809|gb|AFY88372.1| ferrochelatase [Chroococcidiopsis thermalis PCC 7203]
Length = 387
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 211 DASAEIVFSGKAQPGVTATDVNI--EEVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLL 268
D A++ P V + V+ + V+M E + +G ++E+ NG+ A +GF+ L
Sbjct: 312 DGMADLTIEALNSPSVKLSQVSQMKKRVKMYPQERWQ-WGMTTSAEIWNGRIAMLGFIAL 370
Query: 269 LDFELLTGKGLLKGTGFL 286
+ EL+TGKGLL G L
Sbjct: 371 I-IELITGKGLLHAVGIL 387
>gi|282896067|ref|ZP_06304093.1| Ferrochelatase [Raphidiopsis brookii D9]
gi|281198985|gb|EFA73860.1| Ferrochelatase [Raphidiopsis brookii D9]
Length = 387
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 211 DASAEIVFSGKAQPGVTATDVNI--EEVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLL 268
+A A++V +P + + V ++V+M E E +G ++E+ NG+ A +GF+ L
Sbjct: 312 EALAQLVVDALEKPSLKLSQVTQMRKKVKMYPQERWE-WGLTTSAEVWNGRIAMLGFIAL 370
Query: 269 LDFELLTGKGLLKGTGFL 286
+ E++TG+GLL G L
Sbjct: 371 I-IEIITGRGLLHAIGLL 387
>gi|424881262|ref|ZP_18304894.1| NAD(P)H-dependent nitrite reductase, small subunit [Rhizobium
leguminosarum bv. trifolii WU95]
gi|392517625|gb|EIW42357.1| NAD(P)H-dependent nitrite reductase, small subunit [Rhizobium
leguminosarum bv. trifolii WU95]
Length = 109
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 19/118 (16%)
Query: 90 NWVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
NW+ + LS +P +G R V G+ + ++EVFAIE+ P +G S+G+++AK
Sbjct: 2 NWIAIGDLSDIPLRGARCVKTPQGKIAVFRTAENEVFAIEDHCPHKGGPLSQGIVHAK-- 59
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
+ CP L TG +AL + PV ++ ++I +E
Sbjct: 60 ---SVTCPLHNWVISLETG------------KALGADEGEVRTIPVLNEDGRLFIALE 102
>gi|330470115|ref|YP_004407858.1| nitrite reductase (nad(p)h), small subunit [Verrucosispora maris
AB-18-032]
gi|328813086|gb|AEB47258.1| nitrite reductase (nad(p)h), small subunit [Verrucosispora maris
AB-18-032]
Length = 115
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAY--SEGLINAKLT 147
W V PLS L + DG + L D ++AIENR P GAY S G++ ++
Sbjct: 8 RWHTVCPLSRLDLDRGVAALIDGVQVALFRTADGLYAIENRDPVTGAYVLSRGIVGSRRG 67
Query: 148 QDGCIVCPTTESTFDLRTGAVRD 170
+ P + +DLRTG D
Sbjct: 68 VPT-VASPLHKQVYDLRTGDCLD 89
>gi|359687562|ref|ZP_09257563.1| nitrite reductase small subunit [Leptospira licerasiae serovar
Varillal str. MMD0835]
gi|418750439|ref|ZP_13306725.1| nitrite reductase [NAD(P)H], small subunit [Leptospira licerasiae
str. MMD4847]
gi|418755970|ref|ZP_13312158.1| nitrite reductase [NAD(P)H], small subunit [Leptospira licerasiae
serovar Varillal str. VAR 010]
gi|384115641|gb|EIE01898.1| nitrite reductase [NAD(P)H], small subunit [Leptospira licerasiae
serovar Varillal str. VAR 010]
gi|404273042|gb|EJZ40362.1| nitrite reductase [NAD(P)H], small subunit [Leptospira licerasiae
str. MMD4847]
Length = 121
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 17/119 (14%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWY--KDEVFAIENRSPAEG--AYSEGLINAKL 146
W+PV +S P GE I + + ++E FA EN+ P G S G+I
Sbjct: 10 WIPVSTVSEFPDDGGVCAKVYGEQIAIFHFSSRNEWFACENKCPHTGDMVLSRGMIGDSQ 69
Query: 147 TQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
+ + CP + +F LRTGA ++ ++ +PV ++ +YI +E
Sbjct: 70 GEPK-VACPMHKKSFSLRTGA------------CISGEEYSVKTYPVHIEDGTVYIGIE 115
>gi|115385318|ref|XP_001209206.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114196898|gb|EAU38598.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 547
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 23/131 (17%)
Query: 109 IQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTGAV 168
+QDG+ +LL+ Y+ +V A+ SP Y L N + DG I CP + F++ TG V
Sbjct: 29 VQDGK-VLLVKYEGQVHAL---SPRCTHYGAPLKNGVVAPDGRITCPWHGACFNIHTGDV 84
Query: 169 RDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEGGASSDASAEIVFSGKAQPGVTA 228
D PA + L F V +YI+ E A + SG+ P +
Sbjct: 85 ED-----------APAPNALSTFDVVEKNGAVYIKGEESA--------IKSGQRDPAIKC 125
Query: 229 TDVNIEEVRMV 239
+ + E+V ++
Sbjct: 126 SATSPEKVVVI 136
>gi|399041212|ref|ZP_10736361.1| NAD(P)H-dependent nitrite reductase, small subunit [Rhizobium sp.
CF122]
gi|398060627|gb|EJL52447.1| NAD(P)H-dependent nitrite reductase, small subunit [Rhizobium sp.
CF122]
Length = 109
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 19/118 (16%)
Query: 90 NWVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
NW+ + +S +P +G R V G+ + ++E+FAIE+ P +G S+G+++AK
Sbjct: 2 NWIAIGDISEIPLRGARCVKTPQGKIAVFRTAENEIFAIEDHCPHKGGPLSQGIVHAK-- 59
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
+ CP L TG +AL + PV+ + ++I +E
Sbjct: 60 ---AVTCPLHNWVISLETG------------KALGADEGEVRTIPVRNENGALFIALE 102
>gi|411119186|ref|ZP_11391566.1| Chlorophyll A-B binding protein [Oscillatoriales cyanobacterium
JSC-12]
gi|410711049|gb|EKQ68556.1| Chlorophyll A-B binding protein [Oscillatoriales cyanobacterium
JSC-12]
Length = 69
Score = 43.1 bits (100), Expect = 0.14, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 28/40 (70%), Gaps = 3/40 (7%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
FGFN SEL+NG+ A +GF+ LL E+ TG G++ GFL
Sbjct: 30 FGFNKQSELLNGRLAMLGFVALLLLEVFTGHGVI---GFL 66
>gi|425450765|ref|ZP_18830588.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
7941]
gi|389768260|emb|CCI06586.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
7941]
Length = 56
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 27/39 (69%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN +E +NG+AA IGF++ L E LTG+GLL G
Sbjct: 17 FGFNDYAERLNGRAAMIGFVITLLIEYLTGQGLLSWLGL 55
>gi|282900883|ref|ZP_06308819.1| Ferrochelatase [Cylindrospermopsis raciborskii CS-505]
gi|281194221|gb|EFA69182.1| Ferrochelatase [Cylindrospermopsis raciborskii CS-505]
Length = 387
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 211 DASAEIVFSGKAQPGVTATDVNI--EEVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLL 268
+A A++V +P + + V ++V+M E E +G ++E+ NG+ A +GF+ L
Sbjct: 312 EALAQLVVDALEKPSLKLSQVTQMRKKVKMYPQERWE-WGLTTSAEVWNGRIAMLGFIAL 370
Query: 269 LDFELLTGKGLLKGTGFL 286
+ E++TG+GLL G L
Sbjct: 371 I-IEIITGRGLLHAIGLL 387
>gi|311107098|ref|YP_003979951.1| 2-hydroxybenzoate 5-hydroxylase ferredoxin [Achromobacter
xylosoxidans A8]
gi|310761787|gb|ADP17236.1| 2-hydroxybenzoate 5-hydroxylase ferredoxin 3 [Achromobacter
xylosoxidans A8]
Length = 106
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 16/118 (13%)
Query: 89 ENWVPVVPLSAL-PKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLT 147
+ W PV +S + P ++ +GE + L + ++ A ++R P A L + L
Sbjct: 2 DTWKPVAMVSDISPDTGTLRVVHEGEGVCLYDLQGDICATQDRCPHGNA---SLADGYL- 57
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
+DG I CP + FD+RTG P P P + L + V+ + +Y++ E
Sbjct: 58 EDGTIECPLHQGVFDIRTGK-----PQCP------PVTTDLRRYEVRVEAGTVYLKAE 104
>gi|334116564|ref|ZP_08490656.1| Ferrochelatase [Microcoleus vaginatus FGP-2]
gi|333461384|gb|EGK89989.1| Ferrochelatase [Microcoleus vaginatus FGP-2]
Length = 387
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 211 DASAEIVFSGKAQPGVTATDV--NIEEVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLL 268
+A A++V P V +DV ++V+M E E +G +E+ NG+ A IGF+ L
Sbjct: 312 EALADLVIESIESPNVKFSDVIRPSKKVKMYPQEQWE-WGLTTGAEVWNGRVAMIGFVAL 370
Query: 269 LDFELLTGKGLLKGTGFL 286
L EL+TG+G L G L
Sbjct: 371 L-LELITGQGPLHSIGLL 387
>gi|428207710|ref|YP_007092063.1| CAB/ELIP/HLIP-like protein [Chroococcidiopsis thermalis PCC 7203]
gi|428009631|gb|AFY88194.1| CAB/ELIP/HLIP-like protein [Chroococcidiopsis thermalis PCC 7203]
Length = 57
Score = 43.1 bits (100), Expect = 0.15, Method: Composition-based stats.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN +E +NG+AA IGFLL++ E++TG G+L G
Sbjct: 18 FGFNEYAERLNGRAAMIGFLLMVAIEVVTGHGVLAWLGL 56
>gi|411120765|ref|ZP_11393137.1| Chlorophyll A-B binding protein [Oscillatoriales cyanobacterium
JSC-12]
gi|410709434|gb|EKQ66949.1| Chlorophyll A-B binding protein [Oscillatoriales cyanobacterium
JSC-12]
Length = 69
Score = 43.1 bits (100), Expect = 0.15, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 235 EVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 280
E +M VD D + FGFN +E +NG+ A IGF+ L E++TG G++
Sbjct: 19 EPKMYVD-DTQKFGFNEYAEKLNGRLAMIGFVATLALEVVTGHGVI 63
>gi|398385183|ref|ZP_10543208.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Sphingobium sp. AP49]
gi|397721115|gb|EJK81665.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Sphingobium sp. AP49]
Length = 104
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLTQD 149
+ PV + +P G +V+ DG+++L+ +FAI NR S A+ + G I A
Sbjct: 6 FTPVAHVDDVPPGTSKVVDLDGQSVLICHSNGRLFAIANRCSHADEPLACGRIRA----- 60
Query: 150 GCIVCPTTESTFDLRTG 166
G I CP + FDL TG
Sbjct: 61 GWIACPVHGARFDLETG 77
>gi|434398540|ref|YP_007132544.1| HLIP, single helix LHC light protein [Stanieria cyanosphaera PCC
7437]
gi|428269637|gb|AFZ35578.1| HLIP, single helix LHC light protein [Stanieria cyanosphaera PCC
7437]
Length = 56
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 26/39 (66%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN +E +NG+AA IGF L L E LTG+GLL G
Sbjct: 17 FGFNDYAERLNGRAAMIGFALTLVIEYLTGQGLLSWLGL 55
>gi|374368951|ref|ZP_09626992.1| Rieske (2Fe-2S) domain-containing protein [Cupriavidus basilensis
OR16]
gi|373099539|gb|EHP40619.1| Rieske (2Fe-2S) domain-containing protein [Cupriavidus basilensis
OR16]
Length = 116
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDG 150
V V P LP G+R+++ DG +I+L + AI+N P GA L N +L +G
Sbjct: 13 QVQVAPAGELPPGQRKLVFVDGRSIVLFNIDGALHAIDNSCPHNGA---SLANGRL--EG 67
Query: 151 CIV-CPTTESTFDL 163
I+ CP FDL
Sbjct: 68 SILQCPAHGLRFDL 81
>gi|289207854|ref|YP_003459920.1| nitrite reductase (NAD(P)H), small subunit [Thioalkalivibrio sp.
K90mix]
gi|288943485|gb|ADC71184.1| nitrite reductase (NAD(P)H), small subunit [Thioalkalivibrio sp.
K90mix]
Length = 123
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 59/131 (45%), Gaps = 21/131 (16%)
Query: 90 NWVPVVPLSALPK-GERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
+W+ + PL +P G R V +G+ + D VFA+ ++ P +G S+G+++ +
Sbjct: 2 SWLAICPLEDIPPLGARVVASPNGDIAVFRAADDRVFALRDQCPHKGGPLSQGIVHGER- 60
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEG- 206
+ CP DL++G A + FP++ + +++ G
Sbjct: 61 ----VTCPLHNWVIDLQSG------------EATGADSGCTHAFPIRVTDGQVWLDFSGA 104
Query: 207 -GASSDASAEI 216
G ++D +AE+
Sbjct: 105 TGDAADDTAEV 115
>gi|209516305|ref|ZP_03265162.1| Rieske (2Fe-2S) domain protein [Burkholderia sp. H160]
gi|209503241|gb|EEA03240.1| Rieske (2Fe-2S) domain protein [Burkholderia sp. H160]
Length = 110
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 15/114 (13%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+WV V ++ P G R + DG + + +AIE+ P +G G++ +
Sbjct: 3 DWVDVEAMTHFPPGSVRSVDVDGTQVAVFNLDGVCYAIEDTCPHDG----GILTGGAVEG 58
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIR 203
+VCP + F +RTG V PA + +FPV+ + + +R
Sbjct: 59 DEVVCPRHGARFCIRTGKV-----------LAPPAYEDVAVFPVRIEGGVLQVR 101
>gi|166364945|ref|YP_001657218.1| CAB/ELIP/HLIP-related protein [Microcystis aeruginosa NIES-843]
gi|390437845|ref|ZP_10226362.1| Genome sequencing data, contig C311 [Microcystis sp. T1-4]
gi|422302656|ref|ZP_16390017.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9806]
gi|425437893|ref|ZP_18818305.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9432]
gi|425442899|ref|ZP_18823133.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9717]
gi|425444998|ref|ZP_18825038.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9443]
gi|425456882|ref|ZP_18836588.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9807]
gi|425465516|ref|ZP_18844825.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9809]
gi|425471758|ref|ZP_18850609.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9701]
gi|443651819|ref|ZP_21130752.1| high light inducible protein [Microcystis aeruginosa DIANCHI905]
gi|159028525|emb|CAO87331.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|166087318|dbj|BAG02026.1| CAB/ELIP/HLIP-related protein [Microcystis aeruginosa NIES-843]
gi|389677026|emb|CCH94000.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9432]
gi|389715932|emb|CCH99766.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9717]
gi|389735113|emb|CCI01333.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9443]
gi|389788064|emb|CCI16572.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9806]
gi|389801919|emb|CCI18976.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9807]
gi|389832226|emb|CCI24334.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9809]
gi|389838780|emb|CCI30486.1| Genome sequencing data, contig C311 [Microcystis sp. T1-4]
gi|389882262|emb|CCI37227.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9701]
gi|443334460|gb|ELS48972.1| high light inducible protein [Microcystis aeruginosa DIANCHI905]
Length = 56
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 27/39 (69%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN +E +NG+AA IGF++ L E LTG+GLL G
Sbjct: 17 FGFNDYAERLNGRAAMIGFVITLLIEYLTGQGLLSWLGL 55
>gi|113475577|ref|YP_721638.1| CAB/ELIP/HLIP-like protein [Trichodesmium erythraeum IMS101]
gi|110166625|gb|ABG51165.1| CAB/ELIP/HLIP-related protein [Trichodesmium erythraeum IMS101]
Length = 56
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 26/39 (66%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN +E +NG+AA IGF+L L E TG+GLL G
Sbjct: 17 FGFNQYAERLNGRAAMIGFVLTLAIEYFTGEGLLSWLGL 55
>gi|428212095|ref|YP_007085239.1| Chlorophyll A-B binding protein [Oscillatoria acuminata PCC 6304]
gi|428000476|gb|AFY81319.1| Chlorophyll A-B binding protein [Oscillatoria acuminata PCC 6304]
Length = 59
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 26/39 (66%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN +E +NG+AA IGF L L E LTG+GLL G
Sbjct: 20 FGFNKYAERLNGRAAMIGFALTLLIEYLTGQGLLSWLGL 58
>gi|405378412|ref|ZP_11032334.1| NAD(P)H-dependent nitrite reductase, small subunit [Rhizobium sp.
CF142]
gi|397325084|gb|EJJ29427.1| NAD(P)H-dependent nitrite reductase, small subunit [Rhizobium sp.
CF142]
Length = 109
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 19/118 (16%)
Query: 90 NWVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
NW P+ +S +P +G R V + +DEV+AIENR P +G SEG+++
Sbjct: 2 NWHPIGEISDIPLRGSRCVKTPHMNIAVFRTGEDEVYAIENRCPHKGGPLSEGIVHGN-- 59
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
+ CP L TG +AL + P++ + +YI +E
Sbjct: 60 ---AVTCPLHNWVISLETG------------KALGADDGAVRTIPLRNEGGRLYIALE 102
>gi|428307577|ref|YP_007144402.1| CAB/ELIP/HLIP family protein [Crinalium epipsammum PCC 9333]
gi|428249112|gb|AFZ14892.1| CAB/ELIP/HLIP-related protein [Crinalium epipsammum PCC 9333]
Length = 56
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN +E +NG+AA IGF ++L E +TGKG+L G
Sbjct: 17 FGFNDYAERLNGRAAMIGFTIMLVIEYITGKGVLSWLGL 55
>gi|428776933|ref|YP_007168720.1| CAB/ELIP/HLIP family protein [Halothece sp. PCC 7418]
gi|428691212|gb|AFZ44506.1| putative CAB/ELIP/HLIP family protein [Halothece sp. PCC 7418]
Length = 54
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 27/40 (67%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
FGFN +E +NG+AA IGF+ LL E +GKGLL G +
Sbjct: 15 FGFNKYAERLNGRAAMIGFIALLLIEFFSGKGLLAWLGLV 54
>gi|425459449|ref|ZP_18838935.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9808]
gi|389822803|emb|CCI29452.1| Genome sequencing data, contig C311 [Microcystis aeruginosa PCC
9808]
Length = 56
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 27/39 (69%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN +E +NG+AA IGF++ L E LTG+GLL G
Sbjct: 17 FGFNDYAERLNGRAAMIGFVITLLIEYLTGQGLLSWLGL 55
>gi|291566124|dbj|BAI88396.1| high light inducible protein [Arthrospira platensis NIES-39]
Length = 64
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTG 284
FGFN SE +NG+AA IGF++ L E TG+GLL G
Sbjct: 25 FGFNSYSERLNGRAAMIGFVITLAIEYFTGQGLLAWLG 62
>gi|448361318|ref|ZP_21549939.1| Rieske (2Fe-2S) domain-containing protein [Natrialba asiatica DSM
12278]
gi|445651128|gb|ELZ04038.1| Rieske (2Fe-2S) domain-containing protein [Natrialba asiatica DSM
12278]
Length = 622
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 6/115 (5%)
Query: 84 GGGGGENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEG-AYSEGLI 142
G G E + PVV L L + R + DG + + ++ E+ A+ NR P G EG +
Sbjct: 8 GDGADEAFSPVVALDELEEAGRELASIDGTPLAIFHHEGEIRAVNNRCPHMGFPLVEGTV 67
Query: 143 NAKLTQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDE 197
+ DG + C + F+L G D + ++ + T+Y+ P T E
Sbjct: 68 D-----DGILTCHWHHARFELSCGDTFDPWADDVQTYPVEIRDGTVYVNPKPTHE 117
>gi|411120541|ref|ZP_11392913.1| Chlorophyll A-B binding protein [Oscillatoriales cyanobacterium
JSC-12]
gi|410709210|gb|EKQ66725.1| Chlorophyll A-B binding protein [Oscillatoriales cyanobacterium
JSC-12]
Length = 56
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 26/39 (66%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN +E +NG+AA IGF L L E +TG+GLL G
Sbjct: 17 FGFNEYAERLNGRAAMIGFALALAIEYVTGQGLLSWLGL 55
>gi|443323302|ref|ZP_21052310.1| Chlorophyll A-B binding protein [Gloeocapsa sp. PCC 73106]
gi|442787040|gb|ELR96765.1| Chlorophyll A-B binding protein [Gloeocapsa sp. PCC 73106]
Length = 56
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN +E +NG+AA IGF+L++ E L+G+GLL G
Sbjct: 17 FGFNEYAERLNGRAAMIGFVLVILIEYLSGQGLLTWLGL 55
>gi|374854349|dbj|BAL57233.1| ferredoxin subunit of phenylpropionate dioxygenase [uncultured
Chloroflexi bacterium]
gi|374855188|dbj|BAL58051.1| ferredoxin subunit of phenylpropionate dioxygenase [uncultured
Chloroflexi bacterium]
Length = 121
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 18/111 (16%)
Query: 94 VVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLTQDGCI 152
+ P+ LP GER + + E +++ ++FAI +R S +G EG +L + I
Sbjct: 17 IAPIEELPSGERLFVQIEDEPVVIFNVAGQLFAIADRCSHDDGPLGEG----ELEEGYRI 72
Query: 153 VCPTTESTFDLRTGAVRDWYPNNPVLRAL-TPALSTLYIFPVKTDEKNIYI 202
VCP + FD+RTG +AL PA+ + +PV+ I++
Sbjct: 73 VCPRHGAEFDIRTG------------KALQMPAVVDISAYPVQVINGMIWV 111
>gi|425455756|ref|ZP_18835467.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
gi|389803285|emb|CCI17763.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
Length = 70
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 235 EVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 280
E +M VD G GF +E +NG+ A IGF+ LL ELLTGKG++
Sbjct: 20 EPKMYVDSS-SGLGFTKKAEKLNGRLAMIGFVSLLAIELLTGKGII 64
>gi|427723056|ref|YP_007070333.1| high light inducible protein [Leptolyngbya sp. PCC 7376]
gi|427354776|gb|AFY37499.1| high light inducible protein [Leptolyngbya sp. PCC 7376]
Length = 45
Score = 42.7 bits (99), Expect = 0.19, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
FGF +++E +NG+ A IGF+ L EL TG+G+L G L
Sbjct: 6 FGFTISAESLNGRMAMIGFVAALALELTTGQGVLHFFGLL 45
>gi|254500291|ref|ZP_05112442.1| nitrite reductase (NAD(P)H), small subunit [Labrenzia alexandrii
DFL-11]
gi|222436362|gb|EEE43041.1| nitrite reductase (NAD(P)H), small subunit [Labrenzia alexandrii
DFL-11]
Length = 115
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 89 ENWVPVVPLSALPKGERRVIIQDGETILLLWYKDE-VFAIENRSPAEGA-YSEGLINAKL 146
NWV + L+ +P+ RV+ D I + D+ V+A+++R P +G S+G+++
Sbjct: 6 RNWVAIGDLTDIPREGARVVKTDAGCIAVFRTADDKVYALDDRCPHKGGPLSQGIVHGT- 64
Query: 147 TQDGCIVCPTTESTFDLRTG 166
+ CP FDL TG
Sbjct: 65 ----SVTCPLHNWVFDLATG 80
>gi|119489597|ref|ZP_01622357.1| CAB/ELIP/HLIP-related protein [Lyngbya sp. PCC 8106]
gi|119454509|gb|EAW35657.1| CAB/ELIP/HLIP-related protein [Lyngbya sp. PCC 8106]
Length = 56
Score = 42.7 bits (99), Expect = 0.19, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN +E +NG+AA +GF++ L E TG+GLL G
Sbjct: 17 FGFNHYAERLNGRAAMMGFVITLAIEYFTGQGLLSWLGL 55
>gi|399057247|ref|ZP_10743874.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Novosphingobium sp. AP12]
gi|398042281|gb|EJL35315.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Novosphingobium sp. AP12]
Length = 104
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 15/112 (13%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDG 150
+V V L +P G ++V+ +G +++L+ KD +FA+ N +++ + + G
Sbjct: 6 FVAVAKLEEIPAGGKKVVEVNGVSVILVNAKDRIFAVRNLC----SHAYETLECGRVRAG 61
Query: 151 CIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
I CP + FDL TG P NP PA + + V+ D I I
Sbjct: 62 WISCPVHGARFDLETGK-----PLNP------PASMPIDTYEVRMDGDTIEI 102
>gi|334117894|ref|ZP_08491985.1| CAB/ELIP/HLIP-related protein [Microcoleus vaginatus FGP-2]
gi|333461003|gb|EGK89611.1| CAB/ELIP/HLIP-related protein [Microcoleus vaginatus FGP-2]
Length = 67
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 26/39 (66%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN +E +NG+AA IGF L L E +TG+GLL G
Sbjct: 28 FGFNSYAERLNGRAAMIGFSLTLIIEYVTGQGLLSWLGL 66
>gi|428315366|ref|YP_007113248.1| CAB/ELIP/HLIP-related protein [Oscillatoria nigro-viridis PCC 7112]
gi|428239046|gb|AFZ04832.1| CAB/ELIP/HLIP-related protein [Oscillatoria nigro-viridis PCC 7112]
Length = 67
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 26/39 (66%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN +E +NG+AA IGF L L E +TG+GLL G
Sbjct: 28 FGFNSYAERLNGRAAMIGFSLTLIIEYVTGQGLLSWLGL 66
>gi|440684161|ref|YP_007158956.1| ferrochelatase [Anabaena cylindrica PCC 7122]
gi|428681280|gb|AFZ60046.1| ferrochelatase [Anabaena cylindrica PCC 7122]
Length = 387
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 212 ASAEIVFSGKAQPGVTATDVNI--EEVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLL 269
A A++V +P + + V + V+M E E +G ++E+ NG+ A +GF+ L+
Sbjct: 313 ALADLVIESLEKPSLKLSQVTQMKKRVKMYPQERWE-WGLTTSAEVWNGRIAMLGFIALI 371
Query: 270 DFELLTGKGLLKGTGFL 286
EL+TG+GLL G L
Sbjct: 372 -IELITGQGLLHAIGLL 387
>gi|50084190|ref|YP_045700.1| ferredoxin [Acinetobacter sp. ADP1]
gi|2271505|gb|AAC27112.1| unknown [Acinetobacter sp. ADP1]
gi|49530166|emb|CAG67878.1| putative ferredoxin [Acinetobacter sp. ADP1]
Length = 101
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W+ V + + + E + + + + I + + FAIEN P ++ L+ +D
Sbjct: 2 SWISVCGIDDVSEDEPKAVEINDKKIGVFVIDENYFAIENVCP----HAFALLTEGFIED 57
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
+ CP E+ FD++TG ++ P L +PV+ +++ I I++
Sbjct: 58 QTVECPLHEAIFDIQTGQLKS-----------GPGCRDLCTYPVRVEDQQIQIQL 101
>gi|376006830|ref|ZP_09784045.1| putative CAB/ELIP/HLIP-related protein (Chlorophyll a-b binding /
Early Light Inducible Protein / High Light Inducible
Protein) [Arthrospira sp. PCC 8005]
gi|375324894|emb|CCE19798.1| putative CAB/ELIP/HLIP-related protein (Chlorophyll a-b binding /
Early Light Inducible Protein / High Light Inducible
Protein) [Arthrospira sp. PCC 8005]
Length = 68
Score = 42.7 bits (99), Expect = 0.22, Method: Composition-based stats.
Identities = 20/39 (51%), Positives = 25/39 (64%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN SE +NG+AA IGF++ L E T +GLL G
Sbjct: 29 FGFNSYSERLNGRAAMIGFVITLAIEYFTKQGLLAWLGL 67
>gi|121595400|ref|YP_987296.1| Rieske (2Fe-2S) domain-containing protein [Acidovorax sp. JS42]
gi|1773276|gb|AAB40382.1| ferredoxin 2NT [Pseudomonas sp.]
gi|120607480|gb|ABM43220.1| Rieske (2Fe-2S) domain protein [Acidovorax sp. JS42]
Length = 104
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 19/119 (15%)
Query: 89 ENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
ENW+ + A+P+G+ +I G+ I + EVFA +N A S+G + +
Sbjct: 3 ENWIDAIARDAVPEGDVVGVIVAGKDIAFYEVEGEVFATDNLCTHGAARLSDGFLEGREI 62
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRAL-TPALSTLYIFPVKTDEKNIYIRME 205
+ CP + FD+ TG +AL TP + +PVK + + ++++
Sbjct: 63 E-----CPLHQGRFDVCTG------------KALCTPLTQDIKTYPVKIENMRVMLKLD 104
>gi|291241481|ref|XP_002740651.1| PREDICTED: conserved hypothetical protein-like isoform 1
[Saccoglossus kowalevskii]
Length = 155
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 14/115 (12%)
Query: 98 SALPKGERRVIIQDGETILLLWYKDEVFAIENRSP-AEGAYSEGLINAKLTQDGCIVCPT 156
S+ P G ++ +G+ I L Y V+AI + P A G G I C+ CP
Sbjct: 46 SSTPAGN--LVHMNGQKIALFRYSHRVYAINEQCPHAGGPLHIGDIEELPGNSLCLRCPW 103
Query: 157 TESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEK-NIYIRMEGGASS 210
FDL TG V+ +PN ++ + ++P K D+ NIYI + +S
Sbjct: 104 HSWKFDLETGKVK--HPNGRDIKTV--------VYPTKIDDDGNIYIGFDQFSSH 148
>gi|213404930|ref|XP_002173237.1| apoptosis-inducing factor 3 [Schizosaccharomyces japonicus yFS275]
gi|212001284|gb|EEB06944.1| apoptosis-inducing factor 3 [Schizosaccharomyces japonicus yFS275]
Length = 567
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 14/80 (17%)
Query: 114 TILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTGAVRDWYP 173
++LLL +KD+ +A ++ GA L N L +G IVCP + +++ TG + D
Sbjct: 30 SVLLLRHKDQFYATSSKCSHYGA---PLANGCLNGNGSIVCPWHGAAYNIETGDIED--- 83
Query: 174 NNPVLRALTPALSTLYIFPV 193
+PAL+ L FPV
Sbjct: 84 --------SPALNALRRFPV 95
>gi|344199700|ref|YP_004784026.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Acidithiobacillus ferrivorans SS3]
gi|343775144|gb|AEM47700.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Acidithiobacillus ferrivorans SS3]
Length = 116
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 7/108 (6%)
Query: 100 LPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTES 159
P+G+ G + + D +A + R A L + K+ D I C +
Sbjct: 12 FPRGQATACQVAGMDLAVYALNDGYYATQARCTHLKA---SLTDGKIIDDQLIQCHRHHA 68
Query: 160 TFDLRTGAVRDWY---PNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
FD+RTGAV DW P +L + P L FPV ++ +Y+ +
Sbjct: 69 RFDIRTGAVVDWASFPPGIQLLNFICPR-KALKTFPVSVEDGALYVEI 115
>gi|167840550|ref|ZP_02467234.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia thailandensis MSMB43]
gi|424905700|ref|ZP_18329203.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia thailandensis MSMB43]
gi|390928593|gb|EIP85997.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia thailandensis MSMB43]
Length = 109
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 48/115 (41%), Gaps = 15/115 (13%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDG 150
W P+ L +GE + I + D+VFA+ + + ++ ++G
Sbjct: 9 WHPLGALDEFSEGEPAARVVGSRPIAVFRLGDDVFALHDLC----THGHARLSEGFAENG 64
Query: 151 CIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
C+ CP + FD+RTGA + P + ++PV+ + + I ++
Sbjct: 65 CVECPLHQGLFDIRTGAPK-----------CAPVTEPVRVYPVRIVDGRVEIHVD 108
>gi|344943940|ref|ZP_08783226.1| Rieske (2Fe-2S) iron-sulfur domain protein [Methylobacter
tundripaludum SV96]
gi|344259598|gb|EGW19871.1| Rieske (2Fe-2S) iron-sulfur domain protein [Methylobacter
tundripaludum SV96]
Length = 106
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W+ V +AL GE V+ DG + + + +AIE+ +GA + + +L D
Sbjct: 3 DWIDAVDENALANGENIVMDVDGTDVAIFKIDGQFYAIEDVCTHDGAE---IASGRLEGD 59
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIR 203
I+CP + F ++TG V+ +P PA + FPV+ + + +R
Sbjct: 60 E-IICPRHGARFCVKTGEVK-----SP------PAYENIDCFPVRIENGKVQVR 101
>gi|238062106|ref|ZP_04606815.1| 2Fe-2S domain-containing protein [Micromonospora sp. ATCC 39149]
gi|237883917|gb|EEP72745.1| 2Fe-2S domain-containing protein [Micromonospora sp. ATCC 39149]
Length = 283
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 88 GENWVPVVPLSALPKGERRVIIQDGETILLLWYK--DEVFAIENRSPAE-GAYSEGLINA 144
GE W + L+ALP +R+++ ++ + + ++ Y+ DEV + R P + G EG +
Sbjct: 177 GEGWHALADLAALP--QRKLVTREMDDVSVILYRHGDEVTVMLERCPHQSGPLGEGEVT- 233
Query: 145 KLTQDGCIVCPTTESTFDLRTGAV 168
++ C+VCP S F L G V
Sbjct: 234 EIDGHACVVCPWHGSAFRLNGGEV 257
>gi|434391330|ref|YP_007126277.1| ferrochelatase [Gloeocapsa sp. PCC 7428]
gi|428263171|gb|AFZ29117.1| ferrochelatase [Gloeocapsa sp. PCC 7428]
Length = 387
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 211 DASAEIVFSGKAQPGVTATDVNI--EEVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLL 268
A ++V P + + V ++VRM E E +G T+E+ NG+ A +GFL L
Sbjct: 312 QAMVDLVEEAVRNPSLKLSQVTQMKKKVRMYPQERWE-WGMTTTAEVWNGRLAMLGFLAL 370
Query: 269 LDFELLTGKGLLKGTGFL 286
+ EL+TG+GLL G L
Sbjct: 371 V-IELITGRGLLHFVGIL 387
>gi|209527620|ref|ZP_03276120.1| CAB/ELIP/HLIP-related protein [Arthrospira maxima CS-328]
gi|423064468|ref|ZP_17053258.1| CAB/ELIP/HLIP-related protein [Arthrospira platensis C1]
gi|209491969|gb|EDZ92324.1| CAB/ELIP/HLIP-related protein [Arthrospira maxima CS-328]
gi|406713711|gb|EKD08879.1| CAB/ELIP/HLIP-related protein [Arthrospira platensis C1]
Length = 57
Score = 42.4 bits (98), Expect = 0.25, Method: Composition-based stats.
Identities = 20/39 (51%), Positives = 25/39 (64%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN SE +NG+AA IGF++ L E T +GLL G
Sbjct: 18 FGFNSYSERLNGRAAMIGFVITLAIEYFTKQGLLAWLGL 56
>gi|194477331|ref|YP_002049510.1| ferrochelatase [Paulinella chromatophora]
gi|171192338|gb|ACB43300.1| ferrochelatase [Paulinella chromatophora]
Length = 391
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 242 EDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
+D +G+N TSE+ NG+ A +GFL L EL+ G+G L G G L
Sbjct: 348 QDKWAWGWNNTSEIWNGRLAMVGFLAFL-LELMLGRGPLHGLGLL 391
>gi|383775321|ref|YP_005459887.1| hypothetical protein AMIS_1510 [Actinoplanes missouriensis 431]
gi|381368553|dbj|BAL85371.1| hypothetical protein AMIS_1510 [Actinoplanes missouriensis 431]
Length = 284
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 19/119 (15%)
Query: 89 ENWVPVVPLSALPKGERRVIIQDGETILLLWYK--DEVFAIENRSPAE-GAYSEGLINAK 145
E W V LS+LP +R+V ++ + +L Y+ D+V A+ R E G EG +
Sbjct: 179 EEWTAVSSLSSLP--DRKVTVRKAGDVPVLLYRRGDQVSALIERCSHEAGPLGEGEVIGS 236
Query: 146 LTQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALT-PALSTLYIFPVKTDEKNIYIR 203
+ C+VCP STF L G RA+ PA + + PV+ E + +R
Sbjct: 237 -GANACVVCPWHGSTFQLSDG------------RAVHGPAGNDQPVLPVRVREGMVEVR 282
>gi|381191359|ref|ZP_09898869.1| dioxygenase ferredoxin subunit [Thermus sp. RL]
gi|380450719|gb|EIA38333.1| dioxygenase ferredoxin subunit [Thermus sp. RL]
Length = 84
Score = 42.4 bits (98), Expect = 0.25, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 16/90 (17%)
Query: 115 ILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTGAVRDWYPN 174
ILLL+ +EVFA+E+ + +G ++ +DG IVCP + FDLRTG
Sbjct: 11 ILLLYTGEEVFALEDVC----THDDGPLHEGEVEDGAIVCPRHGARFDLRTG-------- 58
Query: 175 NPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
R PA + +FP + + + + +
Sbjct: 59 ----RQTLPAPRPVKVFPARLEGDTVLLDL 84
>gi|291241483|ref|XP_002740652.1| PREDICTED: conserved hypothetical protein-like isoform 2
[Saccoglossus kowalevskii]
Length = 161
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 14/115 (12%)
Query: 98 SALPKGERRVIIQDGETILLLWYKDEVFAIENRSP-AEGAYSEGLINAKLTQDGCIVCPT 156
S+ P G ++ +G+ I L Y V+AI + P A G G I C+ CP
Sbjct: 52 SSTPAGN--LVHMNGQKIALFRYSHRVYAINEQCPHAGGPLHIGDIEELPGNSLCLRCPW 109
Query: 157 TESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEK-NIYIRMEGGASS 210
FDL TG V+ +PN ++ + ++P K D+ NIYI + +S
Sbjct: 110 HSWKFDLETGKVK--HPNGRDIKTV--------VYPTKIDDDGNIYIGFDQFSSH 154
>gi|383316804|ref|YP_005377646.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Frateuria aurantia DSM 6220]
gi|379043908|gb|AFC85964.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Frateuria aurantia DSM 6220]
Length = 106
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 17/115 (14%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W+ V L GE RV+ I + + E++AIE++ + L A D
Sbjct: 3 DWIMVGTRGELLPGEHRVVWDGDTAIAVFNIEGELYAIEDQCT-----HDSLEMASGELD 57
Query: 150 GC-IVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIR 203
G +VCP + FDLRTGA PA + FPVK + I+ R
Sbjct: 58 GHELVCPWHGARFDLRTGAA-----------LCAPAYEPVATFPVKEEHGAIWTR 101
>gi|17228010|ref|NP_484558.1| high light inducible protein [Nostoc sp. PCC 7120]
gi|17129859|dbj|BAB72472.1| CAB/ELIP/HLIP superfamily [Nostoc sp. PCC 7120]
Length = 72
Score = 42.4 bits (98), Expect = 0.27, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 235 EVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 280
E ++ VDE + GF +E++NG+ A IGF+ L+ E+ TGKG+
Sbjct: 20 EPKVYVDEQGDRTGFTPYAEILNGRLAMIGFISLIALEVFTGKGIF 65
>gi|440684521|ref|YP_007159316.1| CAB/ELIP/HLIP-related protein [Anabaena cylindrica PCC 7122]
gi|428681640|gb|AFZ60406.1| CAB/ELIP/HLIP-related protein [Anabaena cylindrica PCC 7122]
Length = 56
Score = 42.4 bits (98), Expect = 0.27, Method: Composition-based stats.
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN SE +NG+AA IGF+L++ E LT +G+L G
Sbjct: 17 FGFNEYSERLNGRAAMIGFILMVLIEYLTNQGVLSWLGL 55
>gi|284046835|ref|YP_003397175.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Conexibacter
woesei DSM 14684]
gi|283951056|gb|ADB53800.1| Rieske (2Fe-2S) iron-sulphur domain protein [Conexibacter woesei
DSM 14684]
Length = 105
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 92 VPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLTQDG 150
+ V PL LP G R++ D I + ++AIE+R S +G EGL++++
Sbjct: 5 ITVCPLEELPPGAMRLVETDDLEIGVFNCAGTIYAIEDRCSHDDGPLVEGLLDSEKCT-- 62
Query: 151 CIVCPTTESTFDLRTGA 167
I CP S FDL+TGA
Sbjct: 63 -IECPRHGSLFDLKTGA 78
>gi|53804906|ref|YP_113465.1| Rieske 2Fe-2S family protein [Methylococcus capsulatus str. Bath]
gi|53758667|gb|AAU92958.1| Rieske 2Fe-2S family protein [Methylococcus capsulatus str. Bath]
Length = 106
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 49/114 (42%), Gaps = 15/114 (13%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W+ V P LP+G V DG + + E +AIE+ +GA + + +L D
Sbjct: 3 DWIDVAPADCLPEGGHVVTNLDGIPVAIFKLGGEFYAIEDACTHDGAE---IASGRLDGD 59
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIR 203
IVCP + F L+TG V PA L F V+ + + IR
Sbjct: 60 E-IVCPRHGARFCLKTGKVLS-----------PPAYEDLTCFAVRVADGMVQIR 101
>gi|254422734|ref|ZP_05036452.1| hypothetical protein S7335_2886 [Synechococcus sp. PCC 7335]
gi|196190223|gb|EDX85187.1| hypothetical protein S7335_2886 [Synechococcus sp. PCC 7335]
Length = 56
Score = 42.4 bits (98), Expect = 0.29, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 27/38 (71%)
Query: 248 GFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
GFN +E +NG+AA +GF+ L+ EL+TGKGLL G
Sbjct: 18 GFNEYAEQLNGRAAMVGFVALVLIELITGKGLLTLIGL 55
>gi|409991185|ref|ZP_11274470.1| CAB/ELIP/HLIP-like protein [Arthrospira platensis str. Paraca]
gi|409937962|gb|EKN79341.1| CAB/ELIP/HLIP-like protein [Arthrospira platensis str. Paraca]
Length = 64
Score = 42.0 bits (97), Expect = 0.29, Method: Composition-based stats.
Identities = 20/39 (51%), Positives = 25/39 (64%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN SE +NG+AA IGF++ L E T +GLL G
Sbjct: 25 FGFNSYSERLNGRAAMIGFVITLAIEYFTKQGLLAWLGL 63
>gi|407783213|ref|ZP_11130417.1| ring hydroxylating alpha subunit [Oceanibaculum indicum P24]
gi|407202963|gb|EKE72952.1| ring hydroxylating alpha subunit [Oceanibaculum indicum P24]
Length = 948
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 81/209 (38%), Gaps = 39/209 (18%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAY-SEGLINAKLTQD 149
W+ L +G + G + L V+A N + A+ SEG + +D
Sbjct: 3 WLRAASFDDLKEGGVIGVDVAGTAVALYLLDGVVYATHNICTHQFAFLSEGYV-----ED 57
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME---- 205
GCI CP + FD+RTG + P L + VK + +I++ +E
Sbjct: 58 GCIECPLHQGQFDIRTGKAQ-----------CAPVTGRLATYQVKREGDDIFVDLEAPAV 106
Query: 206 ------GGASSDASAEIVFSGKAQPGVTATDVNIE----EVRMVVDEDLEGFGF-NVTSE 254
G S D + ++ G TA + E + M+ +E + ++ E
Sbjct: 107 EVEAPKAGLSQDHRSFVIIGGGQAGCRTAQHLRGEGFTGRIVMIAEEGHRPYERPPLSKE 166
Query: 255 LINGKAAAIGFLLL-------LDFELLTG 276
++ GKA A +L LD +L TG
Sbjct: 167 VLLGKAGAADCAVLKPAEFDVLDVDLRTG 195
>gi|409991837|ref|ZP_11275065.1| CAB/ELIP/HLIP family protein [Arthrospira platensis str. Paraca]
gi|291569075|dbj|BAI91347.1| high light inducible protein [Arthrospira platensis NIES-39]
gi|409937302|gb|EKN78738.1| CAB/ELIP/HLIP family protein [Arthrospira platensis str. Paraca]
Length = 69
Score = 42.0 bits (97), Expect = 0.31, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 242 EDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 280
E+ + FGFN +E +NG+ A IGF+ L E+LTG GL+
Sbjct: 25 EEAQQFGFNKHAEKLNGRLAMIGFVSALALEVLTGHGLI 63
>gi|33861873|ref|NP_893434.1| high light inducible protein [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|33640241|emb|CAE19776.1| possible high light inducible protein [Prochlorococcus marinus
subsp. pastoris str. CCMP1986]
Length = 88
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 241 DEDLEGFGFNVTSELINGKAAAIGFLLLLDFELL 274
DE + FGFN ++EL+NG+AA IGFL+LL EL+
Sbjct: 41 DEVKDVFGFNSSAELVNGRAAMIGFLMLLLTELV 74
>gi|186471909|ref|YP_001863227.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia phymatum
STM815]
gi|184198218|gb|ACC76181.1| Rieske (2Fe-2S) domain protein [Burkholderia phymatum STM815]
Length = 114
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 16/114 (14%)
Query: 100 LPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTES 159
L G+R+++ DG +I L E+ AI++ P GA L+ +L + + CP
Sbjct: 15 LAPGQRKIVFVDGRSIALFNLGGELRAIDDACPHNGA---SLLTGRL-EGSVLRCPAHGL 70
Query: 160 TFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEGGASSDAS 213
FDL TG +P RAL L FP++ E I I ++ S S
Sbjct: 71 PFDLLTGC-------SPAGRAL-----CLTTFPLRQVEDGIVITLQSSDSPTCS 112
>gi|312598748|gb|ADQ90216.1| ferredoxin [Pseudomonas stutzeri]
Length = 112
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLTQ 148
+W+ + P+ + +GE + DG + + + FA+ + + + SEG + +
Sbjct: 6 SWIDIGPIGVVDEGEVAGVNADGTPLAIFCKEGRFFALHDLCTHGQARLSEGFV-----E 60
Query: 149 DGCIVCPTTESTFDLRTG 166
DGCI CP + FD+ TG
Sbjct: 61 DGCIECPLHQGLFDIETG 78
>gi|434404158|ref|YP_007147043.1| ferrochelatase [Cylindrospermum stagnale PCC 7417]
gi|428258413|gb|AFZ24363.1| ferrochelatase [Cylindrospermum stagnale PCC 7417]
Length = 388
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 212 ASAEIVFSGKAQPGVTATDVNI--EEVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLL 269
A A++V +P + + V + V+M E E +G ++E+ NG+ A +GF+ L+
Sbjct: 313 ALADLVIDSLERPSLKLSQVTQMKKRVKMYPQEQWE-WGLTTSAEVWNGRIAMLGFIALI 371
Query: 270 DFELLTGKGLLKGTGFLD 287
EL+TG+GLL G L
Sbjct: 372 -IELVTGQGLLHMIGLLQ 388
>gi|433773410|ref|YP_007303877.1| NAD(P)H-dependent nitrite reductase, small subunit [Mesorhizobium
australicum WSM2073]
gi|433665425|gb|AGB44501.1| NAD(P)H-dependent nitrite reductase, small subunit [Mesorhizobium
australicum WSM2073]
Length = 109
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 19/125 (15%)
Query: 90 NWVPVVPLSALPK-GERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
W + LS +P+ G R V G+ + D+VFAIE+ P G S+G+++
Sbjct: 2 TWTSIGTLSDIPRRGARCVATPQGKIAVFRTADDQVFAIEDHCPHRGGPLSQGIVHG--- 58
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEGG 207
+ CP L TG +AL + PVK + +++++ +E
Sbjct: 59 --AAVTCPLHNWVISLETG------------KALGADEGAVRTIPVKREGEHLFVALEAL 104
Query: 208 ASSDA 212
AS A
Sbjct: 105 ASRAA 109
>gi|427727749|ref|YP_007073986.1| Chlorophyll A-B binding protein [Nostoc sp. PCC 7524]
gi|427363668|gb|AFY46389.1| Chlorophyll A-B binding protein [Nostoc sp. PCC 7524]
Length = 71
Score = 42.0 bits (97), Expect = 0.34, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 235 EVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 280
E ++ VDE + GF +ELING+ A IGF+ L+ E+ TG G+
Sbjct: 20 EPKVYVDEQGDRTGFTPYAELINGRLAMIGFISLIALEVFTGHGIF 65
>gi|186470954|ref|YP_001862272.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia phymatum
STM815]
gi|184197263|gb|ACC75226.1| Rieske (2Fe-2S) domain protein [Burkholderia phymatum STM815]
Length = 593
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 73/167 (43%), Gaps = 19/167 (11%)
Query: 102 KGERRVIIQDGET-ILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLTQDGCIVCPTTES 159
K + R+++Q G IL+++ + VFA++NR P G G ++ DG + C +
Sbjct: 18 KAKGRLVVQGGHRPILVIYDRGRVFALDNRCPHMGFPLERGTVD-----DGILTCHWHHA 72
Query: 160 TFDLRTGAVRDWYPNNPVLRALTPALSTLYI---FPVKTDEKNIYIRMEGGASSDASAEI 216
FDL +G D + ++ A+ +++ F + + R+ G + D I
Sbjct: 73 RFDLESGCTFDLWADDVPGCAVEVRNGDVWVTATFGHADAAAHWHRRLADGLAHDLGLVI 132
Query: 217 VFSGKAQPGVTATDVNIEE-VRMVV-----DEDLEGFGFNVTSELIN 257
KA G A DV + + VR + + D G G + + L N
Sbjct: 133 ---AKAVHGQLAADVPVADIVRQIALFGAQNRDGWGVGLTILTALAN 176
>gi|300869584|ref|ZP_07114165.1| CAB/ELIP/HLIP superfamily protein [Oscillatoria sp. PCC 6506]
gi|300332452|emb|CBN59365.1| CAB/ELIP/HLIP superfamily protein [Oscillatoria sp. PCC 6506]
Length = 71
Score = 42.0 bits (97), Expect = 0.36, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Query: 235 EVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
E +M VDE + GF +E +NG+ A IGF+ LL E+LTG G L GFL
Sbjct: 19 EPKMYVDESVST-GFTPYAEKMNGRFAMIGFVSLLAIEVLTGHGFL---GFL 66
>gi|354566350|ref|ZP_08985522.1| high light inducible protein [Fischerella sp. JSC-11]
gi|353545366|gb|EHC14817.1| high light inducible protein [Fischerella sp. JSC-11]
Length = 71
Score = 42.0 bits (97), Expect = 0.36, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 235 EVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 280
E R+ VDE + GF +EL+NG+ A IGF+ L+ E+ TG G+
Sbjct: 20 EPRVYVDEQGDRTGFTPYAELLNGRLAMIGFVSLIALEVFTGHGVF 65
>gi|148654877|ref|YP_001275082.1| Rieske (2Fe-2S) domain-containing protein [Roseiflexus sp. RS-1]
gi|148566987|gb|ABQ89132.1| Rieske (2Fe-2S) domain protein [Roseiflexus sp. RS-1]
Length = 105
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 17/117 (14%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLTQ 148
+V + + LP G R + +G I L + ++A ++ S A S+G +
Sbjct: 3 EFVKLATIHDLPDGGMRAVEYNGRRIALFRAGETIYATDDICSHAYAELSDGFFDP---D 59
Query: 149 DGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALT-PALSTLYIFPVKTDEKNIYIRM 204
DG + CP S FD+RTG R LT PA + + +F V+ ++ +R+
Sbjct: 60 DGTVECPLHGSRFDVRTG------------RPLTLPAFAPIEVFEVQVQGDDVLVRV 104
>gi|326203692|ref|ZP_08193555.1| two component regulator propeller domain-containing protein
[Clostridium papyrosolvens DSM 2782]
gi|325986132|gb|EGD46965.1| two component regulator propeller domain-containing protein
[Clostridium papyrosolvens DSM 2782]
Length = 600
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 49/125 (39%), Gaps = 14/125 (11%)
Query: 88 GENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLT 147
GE+W PV S L + + G TI Y +FA EN + A + GL N +
Sbjct: 195 GESWSPVN--SGLTTKQINSVAVSGTTIFAGTYGGGIFASENNGKSWTAVNSGLTNNHVY 252
Query: 148 QDGC----IVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIR 203
C I T E F G + W A+ L+ Y+F + ++K I+
Sbjct: 253 FIACSSRSIFAGTDEGIFISSNGG-KTW-------SAVNSGLTNKYVFSLAVEDKKIFAG 304
Query: 204 MEGGA 208
GG
Sbjct: 305 TNGGG 309
>gi|16329541|ref|NP_440269.1| high light inducible protein [Synechocystis sp. PCC 6803]
gi|383321282|ref|YP_005382135.1| high light inducible protein [Synechocystis sp. PCC 6803 substr.
GT-I]
gi|383324452|ref|YP_005385305.1| high light inducible protein [Synechocystis sp. PCC 6803 substr.
PCC-P]
gi|383490336|ref|YP_005408012.1| high light inducible protein [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|384435602|ref|YP_005650326.1| high light inducible protein [Synechocystis sp. PCC 6803]
gi|451813700|ref|YP_007450152.1| high light inducible protein [Synechocystis sp. PCC 6803]
gi|1652023|dbj|BAA16949.1| high light inducible protein [Synechocystis sp. PCC 6803]
gi|339272634|dbj|BAK49121.1| high light inducible protein [Synechocystis sp. PCC 6803]
gi|359270601|dbj|BAL28120.1| high light inducible protein [Synechocystis sp. PCC 6803 substr.
GT-I]
gi|359273772|dbj|BAL31290.1| high light inducible protein [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|359276942|dbj|BAL34459.1| high light inducible protein [Synechocystis sp. PCC 6803 substr.
PCC-P]
gi|407957421|dbj|BAM50661.1| high light inducible protein [Synechocystis sp. PCC 6803]
gi|451779669|gb|AGF50638.1| high light inducible protein [Synechocystis sp. PCC 6803]
Length = 57
Score = 42.0 bits (97), Expect = 0.38, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 240 VDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
V ED + FGFN +E +NG+AA +GFLL+L E T +G+L G
Sbjct: 12 VQEDPK-FGFNNYAEKLNGRAAMVGFLLILVIEYFTNQGVLAWLGL 56
>gi|226356655|ref|YP_002786395.1| benzene 1,2-dioxygenase system ferredoxin subunit [Deinococcus
deserti VCD115]
gi|226318645|gb|ACO46641.1| putative benzene 1,2-dioxygenase system ferredoxin subunit
[Deinococcus deserti VCD115]
Length = 111
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 55/113 (48%), Gaps = 15/113 (13%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+WV V P + LP+G + + G ++L++ Y+ + +A+ N + L+ +++Q
Sbjct: 11 DWVAVGPEAELPEGHQCAVNVQGVSVLVVRYEGQFYALRNNCTHK---DYPLLGGEVSQ- 66
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
G I C + F+L TG R PA+ + ++ +TD+ +Y+
Sbjct: 67 GRITCEKHGAKFELSTGKPRT-----------LPAVKPVRLYQTRTDQGIVYV 108
>gi|116251753|ref|YP_767591.1| 2Fe-2S Rieske nitrite reductase small subunit [Rhizobium
leguminosarum bv. viciae 3841]
gi|115256401|emb|CAK07483.1| putative 2Fe-2S rieske nitrite reductase small subunit [Rhizobium
leguminosarum bv. viciae 3841]
Length = 111
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 19/118 (16%)
Query: 90 NWVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
NW+ + +S +P +G R V G+ + ++EVFAIE+ P +G S+G+++AK
Sbjct: 4 NWIAIGDISDIPLRGARCVKTPQGKIAVFRTAENEVFAIEDHCPHKGGPLSQGIVHAK-- 61
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
+ CP L TG +AL + PV ++ +++ +E
Sbjct: 62 ---SVTCPLHNWVISLETG------------KALGADDGEVRTIPVLNEDGRLFVALE 104
>gi|338729768|ref|YP_004661151.1| tmlT [Pseudoalteromonas sp. SANK 73390]
gi|336087539|emb|CBK62710.1| tmlT [Pseudoalteromonas sp. SANK 73390]
Length = 115
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 50/115 (43%), Gaps = 15/115 (13%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
N+ + L G+ + +G ILL + D+ +A +N P + S + NAK+ +
Sbjct: 7 NYHIAISAEQLTDGQSMALKINGYNILLCKFDDQYYAFKNSCPHQ---SRPMTNAKV-KA 62
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
G ++CP + F L GA N P+ R + + D ++I++
Sbjct: 63 GKLICPMHGAQFSLSDGASMGSLTNRPLTR-----------YEILVDNNAVHIKL 106
>gi|18643024|gb|AAL76201.1|AF379638_4 ferredoxin NBDF [Comamonas sp. JS765]
Length = 132
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 19/119 (15%)
Query: 89 ENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
ENW+ + A+P+G+ +I G+ I + EVFA +N A S+G + +
Sbjct: 31 ENWIDAIARDAVPEGDVVGVIVAGKDIAFYEVEGEVFATDNLCTHGAARLSDGFLEGRE- 89
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRAL-TPALSTLYIFPVKTDEKNIYIRME 205
I CP + FD+ TG +AL TP + +PVK + + ++++
Sbjct: 90 ----IECPLHQGRFDVCTG------------KALCTPLTQDIKTYPVKIENMRVMLKLD 132
>gi|453088122|gb|EMF16163.1| Pyr_redox_2-domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 556
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 14/90 (15%)
Query: 114 TILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTGAVRDWYP 173
T+LL KDEV A+ SP Y L LT DG + CP + F+++TG + D
Sbjct: 37 TVLLAKVKDEVHAL---SPKCTHYGAPLAKGVLTADGRLTCPWHGACFNVKTGDIED--- 90
Query: 174 NNPVLRALTPALSTLYIFPVKTDEKNIYIR 203
PA L+ F + + +YI+
Sbjct: 91 --------APAPDPLHKFEIVQQDGAVYIK 112
>gi|152996684|ref|YP_001341519.1| Rieske (2Fe-2S) domain-containing protein [Marinomonas sp. MWYL1]
gi|150837608|gb|ABR71584.1| Rieske (2Fe-2S) domain protein [Marinomonas sp. MWYL1]
Length = 104
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 54/117 (46%), Gaps = 17/117 (14%)
Query: 89 ENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQ 148
ENW+ + ++ +P+ + + +G I L +DE+FA +N + L++ +
Sbjct: 3 ENWINTISINDIPEDDVIGVTVNGHQIALYKVEDEIFATDNIC----THGHALLSDGFLE 58
Query: 149 DGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALT-PALSTLYIFPVKTDEKNIYIRM 204
DG I CP + F +++G +A++ P + + +T+ I++R
Sbjct: 59 DGEIECPLHQGRFCIKSG------------KAMSEPLTEDIKTYVTRTENGQIFLRF 103
>gi|357024964|ref|ZP_09087100.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Mesorhizobium amorphae CCNWGS0123]
gi|355543182|gb|EHH12322.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Mesorhizobium amorphae CCNWGS0123]
Length = 543
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 51/115 (44%), Gaps = 15/115 (13%)
Query: 88 GENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLT 147
G + V +P S LP G + + E +LL+ EVFAI A + G + L
Sbjct: 43 GPDLVQGIPFSDLPDGGKLLGHCGDEQVLLVRRGTEVFAI----AATCTHYGGPLVDGLV 98
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
D + CP + FDLRTG LRA PA + L + V+ + I+I
Sbjct: 99 VDDTVRCPWHHACFDLRTG---------EALRA--PAFNQLACWSVELRDNRIFI 142
>gi|22204177|emb|CAC86888.1| membrane-bound NiFe hydrogenase [Acidianus ambivalens]
Length = 113
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 40/87 (45%), Gaps = 12/87 (13%)
Query: 115 ILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTGAVRDWYPN 174
+L++ YK FAIE G L + LT DG +VCP S FD++TG V D
Sbjct: 38 VLVINYKGSFFAIEAFCSHAGL---SLEDGFLTDDGKVVCPWHGSVFDIKTGKVVD---- 90
Query: 175 NPVLRALTPALSTLYIFPVKTDEKNIY 201
P R L Y VK DE IY
Sbjct: 91 GPAKRDL-----KTYHVEVKGDEVIIY 112
>gi|427707492|ref|YP_007049869.1| high light inducible protein [Nostoc sp. PCC 7107]
gi|427359997|gb|AFY42719.1| high light inducible protein [Nostoc sp. PCC 7107]
Length = 71
Score = 41.6 bits (96), Expect = 0.41, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 235 EVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 280
E ++ VDE + GF SEL+NG+ A IGF+ L+ E+ TG G+
Sbjct: 20 EPKIYVDEQGDRTGFTPYSELLNGRLAMIGFISLIALEVFTGHGVF 65
>gi|404498043|ref|YP_006722149.1| ferredoxin, Rieske superfamily [Geobacter metallireducens GS-15]
gi|418065987|ref|ZP_12703355.1| Rieske (2Fe-2S) iron-sulfur domain protein [Geobacter
metallireducens RCH3]
gi|78195640|gb|ABB33407.1| ferredoxin, Rieske superfamily [Geobacter metallireducens GS-15]
gi|373561220|gb|EHP87459.1| Rieske (2Fe-2S) iron-sulfur domain protein [Geobacter
metallireducens RCH3]
Length = 100
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 15/109 (13%)
Query: 97 LSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPT 156
+S +P ++++ G+ ILL+ K ++A E P +GA L A + ++G I C
Sbjct: 7 VSDVPDWGKKIVTVKGQEILLVKTKGNIYACETECPHQGA---PLSGALVKEEGHISCQR 63
Query: 157 TESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
F L+TGA ++ +P TL ++PV+ ++ + +E
Sbjct: 64 HGYRFSLKTGACKE-FPE-----------YTLKVYPVEVAGDDVLVGLE 100
>gi|425470171|ref|ZP_18849041.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
gi|389884283|emb|CCI35406.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
Length = 70
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 235 EVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 280
E +M VD G GF +E +NG+ A IGF+ LL E+LTGKG++
Sbjct: 20 EPKMYVDSS-SGLGFTKKAEKLNGRLAMIGFVSLLAIEVLTGKGII 64
>gi|149201147|ref|ZP_01878122.1| hypothetical protein RTM1035_16017 [Roseovarius sp. TM1035]
gi|149145480|gb|EDM33506.1| hypothetical protein RTM1035_16017 [Roseovarius sp. TM1035]
Length = 115
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 89 ENWVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKL 146
+NW+ + L +P +G R V G + D+VFA+ +R P +G SEG+++
Sbjct: 6 QNWLDIGALEDIPQRGARVVKTAQGCVAVFRTADDQVFALSDRCPHKGGPLSEGIVHGH- 64
Query: 147 TQDGCIVCPTTESTFDLRTG 166
+ CP F+L TG
Sbjct: 65 ----AVTCPLHNWVFNLETG 80
>gi|170743760|ref|YP_001772415.1| Rieske (2Fe-2S) domain-containing protein [Methylobacterium sp.
4-46]
gi|168198034|gb|ACA19981.1| Rieske (2Fe-2S) domain protein [Methylobacterium sp. 4-46]
Length = 104
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 26/110 (23%)
Query: 93 PVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCI 152
P+VP+ L G V+++DG TI+ A E P EGA L + +G +
Sbjct: 13 PIVPV--LVGGRHLVLVRDGATIV---------AAERACPHEGA---DLARGRCA-NGRL 57
Query: 153 VCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
+CP ++FDLR G V +P P L ++PV+ +++
Sbjct: 58 LCPHHRASFDLRDGQVSAGWPTRP-----------LRLYPVEIRNAEVFV 96
>gi|393759083|ref|ZP_10347901.1| ferredoxin [Alcaligenes faecalis subsp. faecalis NCIB 8687]
gi|393162702|gb|EJC62758.1| ferredoxin [Alcaligenes faecalis subsp. faecalis NCIB 8687]
Length = 104
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 15/111 (13%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
NW+ + A+ E I G+ + L DE + +N + A L++ +D
Sbjct: 2 NWIKISETDAIDNEESLAIDWQGKKLALHKLDDEFYLTDNVCTHQYA----LLSDGYLED 57
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNI 200
GC+ CP ++ F LRTG + PA + ++P++ + +I
Sbjct: 58 GCVECPLHQAKFCLRTGKAMN-----------APATVDIKVYPLRIEGNDI 97
>gi|443294117|ref|ZP_21033211.1| Nitrite reductase (NAD(P)H) small subunit [Micromonospora lupini
str. Lupac 08]
gi|385882902|emb|CCH21362.1| Nitrite reductase (NAD(P)H) small subunit [Micromonospora lupini
str. Lupac 08]
Length = 115
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAY--SEGLINAKLT 147
+W V L L + DG + L D +FAI+NR P GAY S G++ ++
Sbjct: 8 DWTAVCTLDRLEPNRGVAALVDGVQVALFHTVDGLFAIDNRDPVSGAYVLSRGIVGSR-- 65
Query: 148 QDGC--IVCPTTESTFDLRTGAVRD 170
G + P + +DLRTG D
Sbjct: 66 -GGVPTVASPLHKQVYDLRTGDCLD 89
>gi|381151149|ref|ZP_09863018.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Methylomicrobium album BG8]
gi|380883121|gb|EIC28998.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Methylomicrobium album BG8]
Length = 106
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 15/113 (13%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDG 150
WV V +AL GE V+ DG + + + +AIE+ +GA + + +L D
Sbjct: 4 WVDVCGQNALADGENVVVEVDGTDVAVFRIEGCYYAIEDACTHDGAE---IASGELDGDQ 60
Query: 151 CIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIR 203
I+CP + F ++TGAV +P PA ++ FP++ + + +R
Sbjct: 61 -IICPRHGARFCVKTGAVL-----SP------PAYEDIHAFPLRIENGKVQVR 101
>gi|319782352|ref|YP_004141828.1| nitrite reductase (NAD(P)H) small subunit [Mesorhizobium ciceri
biovar biserrulae WSM1271]
gi|317168240|gb|ADV11778.1| nitrite reductase (NAD(P)H), small subunit [Mesorhizobium ciceri
biovar biserrulae WSM1271]
Length = 109
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 19/125 (15%)
Query: 90 NWVPVVPLSALPK-GERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
NW+ + +S +P+ G R V +G+ + D+V+AI++ P G S+G+++
Sbjct: 2 NWIAIGSISDIPRRGARCVATPEGKIAVFRTADDQVYAIDDHCPHRGGPLSQGIVHGT-- 59
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEGG 207
+ CP L TG +AL + PV+ + + ++I +E
Sbjct: 60 ---AVTCPLHNWVISLETG------------KALGADEGAVRTIPVRVEGERLFIALEAL 104
Query: 208 ASSDA 212
AS A
Sbjct: 105 ASRAA 109
>gi|217979872|ref|YP_002364019.1| Rieske (2Fe-2S) domain-containing protein [Methylocella silvestris
BL2]
gi|217505248|gb|ACK52657.1| Rieske (2Fe-2S) domain protein [Methylocella silvestris BL2]
Length = 107
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 20/112 (17%)
Query: 97 LSALPKGE-RRVIIQDGETILLLWYKDEVFAIENRSPA-EGAYSEGLINAKLTQDGCIVC 154
L +PKGE R I++D E + + EV+A + P +G ++GLI I+C
Sbjct: 10 LDQIPKGEARNFIVRDREIAVYHTHAGEVYATQPGCPHKQGPLADGLIGG-----ATILC 64
Query: 155 PTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVK-TDEKNIYIRME 205
P + FDLRTG + L+ + + I+PV T++ I + +E
Sbjct: 65 PLHDRLFDLRTG------------QNLSGDCTDIQIYPVSLTEDGRIAMEVE 104
>gi|333908727|ref|YP_004482313.1| Rieske (2Fe-2S) domain-containing protein [Marinomonas posidonica
IVIA-Po-181]
gi|333478733|gb|AEF55394.1| Rieske (2Fe-2S) iron-sulfur domain protein [Marinomonas posidonica
IVIA-Po-181]
Length = 104
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 89 ENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQ 148
+NW+ + + +P+ + + +G I L +DE+FA +N + L++ +
Sbjct: 3 DNWIETISIDDVPEDDVIGVTVNGHQIALYKVEDEIFATDNVC----THGHALLSDGFLE 58
Query: 149 DGCIVCPTTESTFDLRTG 166
DG I CP + F ++TG
Sbjct: 59 DGEIECPLHQGRFCIKTG 76
>gi|296128262|ref|YP_003635512.1| Rieske (2Fe-2S) domain-containing protein [Cellulomonas flavigena
DSM 20109]
gi|296020077|gb|ADG73313.1| Rieske (2Fe-2S) iron-sulfur domain protein [Cellulomonas flavigena
DSM 20109]
Length = 125
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 96 PLSALPKGERRVIIQDGETILLLWYKDEVF-AIENRSPAEGA-YSEGLINAKLTQDGCIV 153
PLS +P GE R DG + + + A++ P G ++G I+A++ +V
Sbjct: 16 PLSEIPLGEGRAYAVDGRQVAVFRLRSGALRALDAVCPHRGGPLADGQIDAEV-----VV 70
Query: 154 CPTTESTFDLRTGAVR 169
CP FDLR+GA R
Sbjct: 71 CPLHAHVFDLRSGACR 86
>gi|385810843|ref|YP_005847239.1| Ferredoxin subunit [Ignavibacterium album JCM 16511]
gi|383802891|gb|AFH49971.1| Ferredoxin subunit [Ignavibacterium album JCM 16511]
Length = 117
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 23/116 (19%)
Query: 94 VVPLSALPKGE-RRVII------QDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKL 146
V ++ L + E RR I+ D I L + E++A+ N P + LI
Sbjct: 9 VCRINELRENEGRRFIVPASDGSDDEVEIALFKAEGEIYALSNICPHQHT---ALIYDGF 65
Query: 147 TQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
+DGC+VCP FDL+TG N P R L ++P+K ++ I +
Sbjct: 66 IEDGCVVCPAHGWKFDLKTG-------NQPTGR------KGLDVYPIKIEKDEIMV 108
>gi|325915352|ref|ZP_08177669.1| assimilatory nitrite reductase (NAD(P)H) small subunit [Xanthomonas
vesicatoria ATCC 35937]
gi|325538399|gb|EGD10078.1| assimilatory nitrite reductase (NAD(P)H) small subunit [Xanthomonas
vesicatoria ATCC 35937]
Length = 121
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 20/130 (15%)
Query: 89 ENWVPVVPLSALPKGERRVIIQDGETILLLWY--KDEVFAIENRSPAEGA-YSEGLINAK 145
+ WV V L LP RV+ DG + ++ D+VFA+++R P +G S+G++
Sbjct: 6 DAWVHVCALQELPMLGARVLEVDGLPAIAVFRTASDQVFALQDRCPHKGGPLSQGIVAGD 65
Query: 146 LTQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
+ CP L++G +A P + +P+K + ++I ++
Sbjct: 66 T-----VTCPLHGWAIGLQSG------------QACAPDVGCAPRYPIKVEAGAVWIVLQ 108
Query: 206 GGASSDASAE 215
A DA E
Sbjct: 109 PVAQPDAVTE 118
>gi|427737845|ref|YP_007057389.1| ferrochelatase [Rivularia sp. PCC 7116]
gi|427372886|gb|AFY56842.1| ferrochelatase [Rivularia sp. PCC 7116]
Length = 387
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 211 DASAEIVFSGKAQPGVTATDVNI--EEVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLL 268
A A + P ++ VN ++V++ E E +G ++E+ NG+ A +GFL L
Sbjct: 312 QALANLTIDALKSPSISLAQVNQMKKKVKIYPPERWE-WGITTSAEIWNGRIAMLGFLAL 370
Query: 269 LDFELLTGKGLLKGTGFL 286
+ E+LTG GLL G L
Sbjct: 371 M-IEILTGHGLLHAVGLL 387
>gi|167565586|ref|ZP_02358502.1| naphthalene 1,2-dioxygenase system ferredoxin component
[Burkholderia oklahomensis EO147]
gi|167572691|ref|ZP_02365565.1| naphthalene 1,2-dioxygenase system ferredoxin component
[Burkholderia oklahomensis C6786]
Length = 105
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 15/95 (15%)
Query: 111 DGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTGAVRD 170
DG I + DEV+A+EN P ++ L+ DG + CP E+ FD++TG
Sbjct: 26 DGVEIGIYQVGDEVYALENVCP----HAYALLTQGFVDDGTVECPLHEAVFDIKTGQCL- 80
Query: 171 WYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
P RAL ++ V+ + I I++E
Sbjct: 81 ---KGPGGRALK-------MYAVRLAGEEIQIKVE 105
>gi|226934608|gb|ACO92379.1| salicylate 5-hydroxylase ferredoxin component [Pseudomonas putida]
Length = 105
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 17/118 (14%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLTQ 148
+W+ + +P+ + + +G L + EVFA +N S +G + +
Sbjct: 4 DWIRAAHIEDVPEDDVIGVNLNGHEYALYKVEGEVFATDNICSHGHARLCDGFL-----E 58
Query: 149 DGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEG 206
DG I CP + FD+R G P + +PV+ ++ N+++R+ G
Sbjct: 59 DGQIECPLHQGRFDIRNGKA-----------MCEPLTEDIRAYPVRVEDDNVFLRVAG 105
>gi|163798275|ref|ZP_02192205.1| ferredoxin domain protein [alpha proteobacterium BAL199]
gi|159176438|gb|EDP61023.1| ferredoxin domain protein [alpha proteobacterium BAL199]
Length = 552
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLI---NAK 145
WV +PL+ L R V+ + G+ + L + V AI NR P EG SEG + +
Sbjct: 25 EWVGALPLAELEAKGRAVVKRAGKQVALFVTRAGVRAIANRCPHEGYPLSEGTLAEPSGA 84
Query: 146 LTQDGC-IVCPTTESTFDLRTGAV 168
T D C + C FDL TG+V
Sbjct: 85 GTGDACTLTCNWHNWKFDLETGSV 108
>gi|226944426|ref|YP_002799499.1| assimilatory nitrite reductase, small subunit [Azotobacter
vinelandii DJ]
gi|226719353|gb|ACO78524.1| assimilatory nitrite reductase, small subunit [Azotobacter
vinelandii DJ]
Length = 108
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 19/118 (16%)
Query: 90 NWVPVVPLSALPK-GERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
NW+ + L + G R V G+ + +DEVFA+++R P +G S+GLI K
Sbjct: 2 NWLDICALDEINVLGARIVAGPRGDIAIFRTARDEVFALDDRCPHKGGPLSQGLIYGKR- 60
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
+ CP DL +G AL P + + +PVK + + + ++
Sbjct: 61 ----VACPLHNWQIDLESG------------EALEPDVGCSHKYPVKIEGGRVLLALK 102
>gi|326386786|ref|ZP_08208406.1| 3-phenylpropionate dioxygenase ferredoxin subunit [Novosphingobium
nitrogenifigens DSM 19370]
gi|326208705|gb|EGD59502.1| 3-phenylpropionate dioxygenase ferredoxin subunit [Novosphingobium
nitrogenifigens DSM 19370]
Length = 105
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 21/118 (17%)
Query: 94 VVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLTQDGCI 152
V LS LP GE + + D + + + E+FA+ ++ + + + ++G + +D C
Sbjct: 6 VCSLSELPSGEAKRVESD-PAVAVFNVEGEIFALADQCTHGDASMADGYV-----EDDCT 59
Query: 153 V-CPTTESTFDLRTGAVRDWYPNNPVLRALT-PALSTLYIFPVKTDEKNIYIRMEGGA 208
V CP + F LRTG +AL+ PA L FPV ++ IY+ +E A
Sbjct: 60 VECPLHAARFCLRTG------------KALSQPAYIDLATFPVAVEDGEIYVTVETAA 105
>gi|220914165|ref|YP_002489474.1| Rieske (2Fe-2S) domain-containing protein [Arthrobacter
chlorophenolicus A6]
gi|219861043|gb|ACL41385.1| Rieske (2Fe-2S) domain protein [Arthrobacter chlorophenolicus A6]
Length = 296
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEG-LINAKLTQ 148
W + PL+ LP G+ + G +L+ V + + S G EG L N+ L
Sbjct: 185 WHELAPLAELPDGKLDKRVVAGLNLLVFREGGSVSVLSDVCSHLSGPLHEGKLKNSNLAD 244
Query: 149 DG--CIVCPTTESTFDLRTGAV 168
DG C+VCP STF L TG V
Sbjct: 245 DGGPCVVCPWHRSTFSLHTGEV 266
>gi|187477167|ref|YP_785191.1| ferredoxin [Bordetella avium 197N]
gi|115421753|emb|CAJ48264.1| ferredoxin [Bordetella avium 197N]
Length = 109
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 18/121 (14%)
Query: 89 ENWVPVVPLSAL-PKGERRVIIQDGETILLLWYKDEVFAIENRSP-AEGAYSEGLINAKL 146
E W PV + + P ++ DGE + L ++ V A +++ P + +EG +
Sbjct: 5 EVWKPVALVKDISPDTHTLRVMLDGEAVCLYKLEERVCATQDKCPHGNASLAEGWV---- 60
Query: 147 TQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEG 206
+DG + CP + FD+ +G P P P + L + V+ ++ +++R E
Sbjct: 61 -EDGTVECPLHQGVFDIASGK-----PQCP------PVTTDLRCYDVRVEDGTVFLRAES 108
Query: 207 G 207
Sbjct: 109 A 109
>gi|428310206|ref|YP_007121183.1| Chlorophyll A-B binding protein [Microcoleus sp. PCC 7113]
gi|428251818|gb|AFZ17777.1| Chlorophyll A-B binding protein [Microcoleus sp. PCC 7113]
Length = 63
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 27/41 (65%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFLD 287
FG+ +E ING+ A IGF+ LL ELLT +GLL G LD
Sbjct: 23 FGWTPYAEQINGRFAMIGFVGLLILELLTRQGLLTWLGLLD 63
>gi|73537613|ref|YP_297980.1| Rieske (2Fe-2S) domain-containing protein [Ralstonia eutropha
JMP134]
gi|72120950|gb|AAZ63136.1| Rieske (2Fe-2S) region [Ralstonia eutropha JMP134]
Length = 101
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 26/111 (23%)
Query: 94 VVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIV 153
V+PL+ GER++ + + DE F +N + A L++ +DGCI
Sbjct: 17 VMPLNL---GERQLAVYRSD--------DEYFVTDNVCTHQYA----LLSDGYLEDGCIE 61
Query: 154 CPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
CP + FD+RTG PA + + +PVK +++ +++ +
Sbjct: 62 CPLHQGRFDIRTGKA-----------MCAPASTDIRTYPVKFEDRRVWVEL 101
>gi|406039911|ref|ZP_11047266.1| ferredoxin [Acinetobacter ursingii DSM 16037 = CIP 107286]
Length = 101
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W+ V + + + E + + + + I + + FAIEN P ++ L+ +D
Sbjct: 2 SWISVCGIDDVSEDEPKAVEVNDKKIGVFVIDENYFAIENVCP----HAFALLTEGFIED 57
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
+ CP E+ FD++TG++ P L +PV+ + ++I I++
Sbjct: 58 QTVECPLHEAIFDIQTGSLMS-----------GPGCRDLCTYPVRVEGQDIQIQL 101
>gi|114705674|ref|ZP_01438577.1| hypothetical protein FP2506_14449 [Fulvimarina pelagi HTCC2506]
gi|114538520|gb|EAU41641.1| hypothetical protein FP2506_14449 [Fulvimarina pelagi HTCC2506]
Length = 119
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 11/83 (13%)
Query: 91 WVPVVPLSALPK-GERRVIIQDGETILLLWYK--DEVFAIENRSPAEGA-YSEGLINAKL 146
W+ + + +P+ G RR I+ G + L+ DEVFAIE++ P +G S+G+++
Sbjct: 8 WIGIGRIEDIPQLGARR--IEAGYMTIGLFRTAGDEVFAIEDKCPHKGGPLSQGIVH--- 62
Query: 147 TQDGCIVCPTTESTFDLRTGAVR 169
DGC+ CP L TG +
Sbjct: 63 --DGCVTCPLHNMVISLTTGETQ 83
>gi|427730820|ref|YP_007077057.1| Chlorophyll A-B binding protein [Nostoc sp. PCC 7524]
gi|427366739|gb|AFY49460.1| Chlorophyll A-B binding protein [Nostoc sp. PCC 7524]
Length = 56
Score = 41.2 bits (95), Expect = 0.56, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN +E +NG+AA IGFLL++ E +T +G+L G
Sbjct: 17 FGFNEYAERLNGRAAMIGFLLMVVIEYVTNQGVLSWLGL 55
>gi|189423544|ref|YP_001950721.1| Rieske (2Fe-2S) domain-containing protein [Geobacter lovleyi SZ]
gi|189419803|gb|ACD94201.1| Rieske (2Fe-2S) domain protein [Geobacter lovleyi SZ]
Length = 99
Score = 41.2 bits (95), Expect = 0.57, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 17/114 (14%)
Query: 92 VPVVP-LSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDG 150
+PVV L +P +++I G+ ILL+ K ++A+EN P +GA G L +D
Sbjct: 1 MPVVARLDEVPAMGKKLIQIAGQEILLVNLKGTIYAVENECPHQGAPMSG----ALLKDT 56
Query: 151 CIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
+ CP F+L+ G+ ++ +P R L +PV+ ++ I + +
Sbjct: 57 YLSCPRHGYRFELKDGSCKE----HPECR--------LKTWPVRVEDNEIIVDL 98
>gi|254480256|ref|ZP_05093504.1| putative rieske (2Fe-2S) domain protein [marine gamma
proteobacterium HTCC2148]
gi|214039818|gb|EEB80477.1| putative rieske (2Fe-2S) domain protein [marine gamma
proteobacterium HTCC2148]
Length = 104
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLTQD 149
++ V LS LP+G+ + DG +LL + V+A++N S A+ +G + +
Sbjct: 4 FLQVASLSDLPQGQTLCVEIDGREVLLCHTAEGVYAVDNLCSHADARLCDGKLKGQK--- 60
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALT-PALSTLYIFPVKTDEKNIYIRM 204
I+CP + FD+R G+ ALT PA++ + V D+ I + +
Sbjct: 61 --ILCPLHGAAFDVRDGS------------ALTRPAITPIASHSVTVDDDAILVAL 102
>gi|402824123|ref|ZP_10873507.1| dioxygenase [Sphingomonas sp. LH128]
gi|402262344|gb|EJU12323.1| dioxygenase [Sphingomonas sp. LH128]
Length = 104
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDG 150
+V V L +P+G ++V+ G ++LL+ +D+V+A+ N +++ + + G
Sbjct: 6 FVAVAKLDEVPQGGKKVVEVGGISVLLVGARDQVYAVRNLC----SHAYETLECGRVRAG 61
Query: 151 CIVCPTTESTFDLRTGAVRDWYPNNP 176
I CP + FDL TG P NP
Sbjct: 62 WISCPVHGARFDLETGK-----PINP 82
>gi|424870234|ref|ZP_18293896.1| NAD(P)H-dependent nitrite reductase, small subunit [Rhizobium
leguminosarum bv. viciae WSM1455]
gi|393165935|gb|EJC65982.1| NAD(P)H-dependent nitrite reductase, small subunit [Rhizobium
leguminosarum bv. viciae WSM1455]
Length = 109
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 90 NWVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
NW+ + +S +P +G R V G+ + ++EVFAIE+ P +G S+G+++AK
Sbjct: 2 NWIAIGDISDIPLRGARCVKTPQGKIAVFRTAENEVFAIEDHCPHKGGPLSQGIVHAK-- 59
Query: 148 QDGCIVCPTTESTFDLRTG 166
+ CP L TG
Sbjct: 60 ---SVTCPLHNWVISLETG 75
>gi|398830282|ref|ZP_10588476.1| NAD(P)H-dependent nitrite reductase, small subunit [Phyllobacterium
sp. YR531]
gi|398215991|gb|EJN02552.1| NAD(P)H-dependent nitrite reductase, small subunit [Phyllobacterium
sp. YR531]
Length = 110
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 19/118 (16%)
Query: 90 NWVPVVPLSALPK-GERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
NW+ + ++ +P+ G R V+ G+ + +D+VFAI++ P +G S+G+++
Sbjct: 3 NWITIGSINDIPRRGARCVMTPQGKIAVFRTMEDQVFAIDDHCPHKGGPLSQGIVHG--- 59
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
+ CP L TG +AL ++ P+K D +I +E
Sbjct: 60 --ASVTCPLHNWVISLETG------------KALGADEGSVRTIPLKLDGTSILAHLE 103
>gi|91070394|gb|ABE11308.1| putative high light inducible protein [uncultured Prochlorococcus
marinus clone HF10-88H9]
Length = 81
Score = 41.2 bits (95), Expect = 0.59, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 241 DEDLEGFGFNVTSELINGKAAAIGFLLLLDFELL 274
DE FGFN ++EL+NG+AA IGFL+L+ EL+
Sbjct: 34 DEVKNVFGFNSSAELVNGRAAMIGFLMLILTELI 67
>gi|56751279|ref|YP_171980.1| high light inducible polypeptide HliC [Synechococcus elongatus PCC
6301]
gi|81299054|ref|YP_399262.1| high light inducible polypeptide HliC [Synechococcus elongatus PCC
7942]
gi|56686238|dbj|BAD79460.1| possible high light inducible polypeptide HliC [Synechococcus
elongatus PCC 6301]
gi|81167935|gb|ABB56275.1| possible high light inducible polypeptide HliC [Synechococcus
elongatus PCC 7942]
Length = 47
Score = 41.2 bits (95), Expect = 0.60, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
FGF +E NG+ A IGF++ L ELLTG+G+L G L
Sbjct: 8 FGFTAFAETWNGRLAMIGFVVGLATELLTGQGILSQIGLL 47
>gi|354564843|ref|ZP_08984019.1| CAB/ELIP/HLIP-related protein [Fischerella sp. JSC-11]
gi|353549969|gb|EHC19408.1| CAB/ELIP/HLIP-related protein [Fischerella sp. JSC-11]
Length = 57
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN +E +NG+AA IGF+L++ E T KG+L G
Sbjct: 18 FGFNEYAERLNGRAAMIGFILMVLIEYFTDKGVLSWLGL 56
>gi|218439024|ref|YP_002377353.1| CAB/ELIP/HLIP-like protein [Cyanothece sp. PCC 7424]
gi|218171752|gb|ACK70485.1| CAB/ELIP/HLIP-related protein [Cyanothece sp. PCC 7424]
Length = 59
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN +E +NG+AA IGF++ L E +TG+ LL G
Sbjct: 20 FGFNEYAERLNGRAAMIGFVITLVIEYVTGQSLLSWLGL 58
>gi|374366108|ref|ZP_09624192.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Cupriavidus
basilensis OR16]
gi|373102399|gb|EHP43436.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Cupriavidus
basilensis OR16]
Length = 103
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 25/121 (20%)
Query: 89 ENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQ 148
+ W V+PL+A+P + + G+ I L E++A +N A S G NA+L
Sbjct: 3 KQWTQVIPLAAIPADDVVAVSALGKEIALYSVGGEIYATDN------ACSHG--NARLCD 54
Query: 149 ---DGC-IVCPTTESTFDLRTGAVRDWYPNNPVLRALT-PALSTLYIFPVKTDEKNIYIR 203
DG I CP + FD+RTG RA+ P S + + VK + +++
Sbjct: 55 GFLDGHEIECPLHQGKFDVRTG------------RAMCEPLTSDIQAYSVKVENGAVFVE 102
Query: 204 M 204
+
Sbjct: 103 L 103
>gi|383790888|ref|YP_005475462.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Spirochaeta africana DSM 8902]
gi|383107422|gb|AFG37755.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Spirochaeta africana DSM 8902]
Length = 100
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 15/90 (16%)
Query: 115 ILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTGAVRDWYPN 174
I L +D V+A++N E YSE ++ + DG + CP S F++RTG V D
Sbjct: 26 IALFKLEDGVYALDNVCSHE--YSE--LSEGMVLDGSVYCPKHGSRFEVRTGKVLD---- 77
Query: 175 NPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
PA S + +PV+ ++ I++++
Sbjct: 78 -------LPATSNVKSYPVRIEDGEIFVQV 100
>gi|428769816|ref|YP_007161606.1| CAB/ELIP/HLIP family protein [Cyanobacterium aponinum PCC 10605]
gi|428684095|gb|AFZ53562.1| CAB/ELIP/HLIP-related protein [Cyanobacterium aponinum PCC 10605]
Length = 56
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN +E +NG+AA IGF++ L E +G+GLL G
Sbjct: 17 FGFNDYAEKLNGRAAMIGFIITLAIEYFSGQGLLSWLGL 55
>gi|387128450|ref|YP_006297055.1| nitrite reductase (NAD(P)H) small subunit [Methylophaga sp. JAM1]
gi|386275512|gb|AFI85410.1| Nitrite reductase (NAD(P)H) small subunit [Methylophaga sp. JAM1]
Length = 102
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 89 ENWVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLT 147
+NW V P+ ++P KG R + DG+ + +EVFA+ ++ P + +G ++ +
Sbjct: 2 QNWTEVGPVESVPQKGSRVMTTPDGDVAIFRTSSNEVFALFDQCP----HKKGPLSQGIV 57
Query: 148 QDGCIVCPTTESTFDLRTG 166
D + CP DL++G
Sbjct: 58 YDKRVACPLHNWVIDLKSG 76
>gi|429213467|ref|ZP_19204632.1| assimilatory nitrite reductase small subunit [Pseudomonas sp. M1]
gi|428157949|gb|EKX04497.1| assimilatory nitrite reductase small subunit [Pseudomonas sp. M1]
Length = 108
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 19/123 (15%)
Query: 90 NWVPVVPLSAL-PKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
NW + L + P G R + G+ L DEVFA+++R P +G S+GLI K
Sbjct: 2 NWQDICALEDIQPLGSRVIAAPRGDIALFRTADDEVFALDDRCPHKGGPLSQGLIFGKR- 60
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEGG 207
+ CP +L +G A+ P + + PVK + + + ++
Sbjct: 61 ----VACPLHNWQIELDSG------------NAVAPDVGCAHRHPVKVENGRVLLALKDL 104
Query: 208 ASS 210
A+
Sbjct: 105 AAC 107
>gi|448415213|ref|ZP_21578013.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Halosarcina pallida JCM 14848]
gi|445680871|gb|ELZ33312.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Halosarcina pallida JCM 14848]
Length = 584
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 18/110 (16%)
Query: 94 VVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEG-AYSEGLINAKLTQDGCI 152
VVP+ L + R DG ++ L ++ EV ++NR P G S+G + +DG +
Sbjct: 10 VVPVDELERAGRVQTTVDGRSLALFHHEGEVRVVDNRCPHMGFPLSQGSV-----EDGVL 64
Query: 153 VCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
C + F+L G D P + FPV+ + ++Y+
Sbjct: 65 TCHWHHARFELSCGDTFD------------PWADDVRTFPVEVRDGSVYV 102
>gi|8118284|gb|AAF72975.1|AF252550_2 ferredoxin [Comamonas testosteroni]
gi|2828017|gb|AAD12609.1| ferredoxin [Ralstonia sp. U2]
gi|360040794|gb|AEV91669.1| ferredoxin [Comamonas sp. MQ]
Length = 104
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 19/119 (15%)
Query: 89 ENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
+NW+ L +P+G+ + +G+ I L + E++A +N A S+G + +
Sbjct: 3 QNWIDAACLDDIPEGDVVGVKVNGKEIALYEVEGEIYATDNLCTHGAARMSDGFLEGRE- 61
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRAL-TPALSTLYIFPVKTDEKNIYIRME 205
I CP + FD+ TG +AL TP + +PVK + + ++ME
Sbjct: 62 ----IECPLHQGRFDVCTG------------KALCTPLTKDIKTYPVKIENMRVMLKME 104
>gi|242117799|dbj|BAH80173.1| ferredoxin component of biphenyl dioxygenase [Lysobacter sp. OC7]
Length = 108
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 17/119 (14%)
Query: 94 VVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLTQDGCI 152
V L +P+GE + E I L E+ A ++R + + + ++G + ++G I
Sbjct: 6 VCSLGEVPEGEALRVELFDEPIALFNLDGEILATQDRCTHGDWSLADGFL-----ENGVI 60
Query: 153 VCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEGGASSD 211
C F +RTG V+ PA + L ++PVK + ++Y+ E G +D
Sbjct: 61 ECTLHWGKFCVRTGKVK-----------APPACAALTVYPVKVEGNDVYVDFESGKVND 108
>gi|89055535|ref|YP_510986.1| nitrite reductase (NAD(P)H) large subunit, NirD [Jannaschia sp.
CCS1]
gi|88865084|gb|ABD55961.1| assimilatory nitrite reductase (NAD(P)H) small subunit [Jannaschia
sp. CCS1]
Length = 109
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 13/92 (14%)
Query: 90 NWVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
+WV + L A+P +G R V Q G + +EVFA N P +G +EG+++ +
Sbjct: 2 SWVDIGALDAVPERGARLVKTQMGCVAVFRTGHEEVFAASNTCPHKGGPLAEGIVHGQ-- 59
Query: 148 QDGCIVCPTTESTFDLRTGAVR------DWYP 173
+ CP FDL TG + D YP
Sbjct: 60 ---SVTCPLHNWVFDLNTGEAKGEDGRIDTYP 88
>gi|126696841|ref|YP_001091727.1| high light inducible protein [Prochlorococcus marinus str. MIT
9301]
gi|126543884|gb|ABO18126.1| possible high light inducible protein [Prochlorococcus marinus str.
MIT 9301]
Length = 81
Score = 41.2 bits (95), Expect = 0.64, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 241 DEDLEGFGFNVTSELINGKAAAIGFLLLLDFELL 274
DE FGFN ++EL+NG+AA IGFL+L+ EL+
Sbjct: 34 DEVKNVFGFNSSAELVNGRAAMIGFLMLILTELV 67
>gi|423017750|ref|ZP_17008471.1| 2-hydroxybenzoate 5-hydroxylase ferredoxin 3 [Achromobacter
xylosoxidans AXX-A]
gi|338779118|gb|EGP43571.1| 2-hydroxybenzoate 5-hydroxylase ferredoxin 3 [Achromobacter
xylosoxidans AXX-A]
Length = 108
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 27/121 (22%)
Query: 89 ENWVPVVPLSALP--KGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKL 146
+ W+PV + + G RV ++ GE + L + E+ A ++R P + +
Sbjct: 4 DTWIPVAQVGDISPDTGTLRVALE-GEAVCLYDLQGEICATQDRCP----HGNASLADGY 58
Query: 147 TQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEG 206
+DG I CP + FD+R+G P P PV TD + +R+E
Sbjct: 59 MEDGTIECPLHQGVFDIRSGK-----PQCP---------------PVTTDLRRYAVRVEA 98
Query: 207 G 207
G
Sbjct: 99 G 99
>gi|261855797|ref|YP_003263080.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Halothiobacillus neapolitanus c2]
gi|261836266|gb|ACX96033.1| Rieske (2Fe-2S) iron-sulphur domain protein [Halothiobacillus
neapolitanus c2]
Length = 112
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 19/118 (16%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLTQ 148
W+ V L +GERRV+ E IL++ + A+ N+ + EG ++ L
Sbjct: 8 QWLFVAETRDLAEGERRVVAGPDEDILVVHTDGIILAVGNQCSHQALPLDEGALDGDL-- 65
Query: 149 DGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALT-PALSTLYIFPVKTDEKNIYIRME 205
I CP + F LRTG AL+ PA + + +K ++ IY+ E
Sbjct: 66 ---ITCPYHNAQFCLRTG------------EALSAPAYEPISCYDIKVEDGRIYVAQE 108
>gi|145596381|ref|YP_001160678.1| nitrite reductase (NAD(P)H) small subunit [Salinispora tropica
CNB-440]
gi|145305718|gb|ABP56300.1| assimilatory nitrite reductase (NAD(P)H) small subunit [Salinispora
tropica CNB-440]
Length = 114
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 89 ENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAY--SEGLINAKL 146
W V PL+ L G + DG + L ++FAI+NR P AY S G++ ++
Sbjct: 6 RGWTVVCPLTRLDLGRGVAALVDGVQVALFRTAADLFAIDNRDPVTDAYVLSRGIVGSR- 64
Query: 147 TQDGC--IVCPTTESTFDLRTGAVRD 170
G + P + +DLRTG D
Sbjct: 65 --GGVPTVASPLHKQVYDLRTGDCLD 88
>gi|78779798|ref|YP_397910.1| high light inducible protein-like [Prochlorococcus marinus str. MIT
9312]
gi|78713297|gb|ABB50474.1| high light inducible protein-like protein [Prochlorococcus marinus
str. MIT 9312]
Length = 81
Score = 40.8 bits (94), Expect = 0.67, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 241 DEDLEGFGFNVTSELINGKAAAIGFLLLLDFELL 274
DE FGFN ++EL+NG+AA IGFL+L+ EL+
Sbjct: 34 DEVKNVFGFNSSAELVNGRAAMIGFLMLILTELV 67
>gi|428316696|ref|YP_007114578.1| ferrochelatase [Oscillatoria nigro-viridis PCC 7112]
gi|428240376|gb|AFZ06162.1| ferrochelatase [Oscillatoria nigro-viridis PCC 7112]
Length = 387
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 211 DASAEIVFSGKAQPGVTATDVN--IEEVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLL 268
+A A++V P V +DV + V+M E E +G +E+ NG+ A IGF+ L
Sbjct: 312 EALADLVIESIESPSVKFSDVIRPSKIVKMYPQEQWE-WGLTTGAEVWNGRLAMIGFIAL 370
Query: 269 LDFELLTGKGLLKGTGFL 286
L EL+TG+G L G L
Sbjct: 371 L-MELITGQGPLHSIGLL 387
>gi|384920721|ref|ZP_10020725.1| phenylpropionate dioxygenase ferredoxin subunit [Citreicella sp.
357]
gi|384465414|gb|EIE49955.1| phenylpropionate dioxygenase ferredoxin subunit [Citreicella sp.
357]
Length = 110
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 17/116 (14%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDG 150
W PL+ +P+GE E IL+ V+A+++ + + L + L DG
Sbjct: 3 WHKTFPLAEVPEGEMVQYTGCSEPILVCQVSGTVYAVQDTCTHD---TWSLCDGYL--DG 57
Query: 151 CIV-CPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
IV C + FD+R G V PA L +FPVK ++ ++Y+ +
Sbjct: 58 HIVECSLHMAKFDVRNGEV-----------TALPACEALKVFPVKVEDGHVYVEYQ 102
>gi|417642880|ref|ZP_12292961.1| nitrite reductase [NAD(P)H], small subunit [Staphylococcus warneri
VCU121]
gi|445058855|ref|YP_007384259.1| assimilatory nitrite reductase [Staphylococcus warneri SG1]
gi|330686376|gb|EGG97978.1| nitrite reductase [NAD(P)H], small subunit [Staphylococcus
epidermidis VCU121]
gi|443424912|gb|AGC89815.1| assimilatory nitrite reductase [Staphylococcus warneri SG1]
Length = 104
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 18/99 (18%)
Query: 105 RRVIIQDGETILLLWYKDEVFAIENRSP-AEGAYSEGLINAKLTQDGCIVCPTTESTFDL 163
++V + D E L L + E+FA+ N P EG SEG ++ + CP + DL
Sbjct: 21 KKVFVNDKEIGLFLTNEGEIFAVNNICPHKEGPLSEGTVSGNY-----VYCPLHDQKIDL 75
Query: 164 RTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
+TG V++ P + +PV+ + +I+I
Sbjct: 76 KTGDVQE------------PDTGCVETYPVEVVDGDIFI 102
>gi|427715542|ref|YP_007063536.1| high light inducible protein [Calothrix sp. PCC 7507]
gi|427347978|gb|AFY30702.1| high light inducible protein [Calothrix sp. PCC 7507]
Length = 71
Score = 40.8 bits (94), Expect = 0.70, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 235 EVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 280
E ++ VDE + GF +EL+NG+ A IGF+ L+ E++TG G++
Sbjct: 20 EPKVYVDEQGDRTGFTPYAELLNGRLAMIGFVSLIALEVVTGHGVI 65
>gi|254448998|ref|ZP_05062452.1| dioxygenase ferredoxin reductase component [gamma proteobacterium
HTCC5015]
gi|198261392|gb|EDY85683.1| dioxygenase ferredoxin reductase component [gamma proteobacterium
HTCC5015]
Length = 115
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Query: 100 LPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTES 159
LP GE + + +G I + KD ++A ++ A L K+ D + CP +
Sbjct: 12 LPVGEMKKVNVEGRKIAIYHLKDGIYATQSSCTHVMA---NLTKGKIVDDCKVQCPLHRA 68
Query: 160 TFDLRTGAVRDWYPNNPVLRALT--PALSTLYIFPVKTDEKNIYI 202
FD++TG V W P ++AL +L +PV +++ I +
Sbjct: 69 QFDIKTGEVVTWANFPPGIQALNFIRGEKSLKTYPVIVEDELIKV 113
>gi|424778415|ref|ZP_18205365.1| ferredoxin [Alcaligenes sp. HPC1271]
gi|422886954|gb|EKU29366.1| ferredoxin [Alcaligenes sp. HPC1271]
Length = 104
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 15/111 (13%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
NW+ + A+ E I +G+ + L DE +N + A L++ +D
Sbjct: 2 NWIKISETDAIDNEESLAIEWEGKKLALHKLDDEFHLTDNVCTHQYA----LLSDGYLED 57
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNI 200
GC+ CP ++ F LRTG + PA + ++P++ + +I
Sbjct: 58 GCVECPLHQAKFCLRTGKAMN-----------APATVDIKVYPLRIEGNDI 97
>gi|440685040|ref|YP_007159835.1| high light inducible protein [Anabaena cylindrica PCC 7122]
gi|428682159|gb|AFZ60925.1| high light inducible protein [Anabaena cylindrica PCC 7122]
Length = 71
Score = 40.8 bits (94), Expect = 0.72, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 235 EVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 280
E ++ +DE GF SEL+NG+ A IGF+ L+ E+ TG G+
Sbjct: 20 EPKVYIDEQGNRTGFTKYSELLNGRLAMIGFISLIALEVFTGHGVF 65
>gi|345862697|ref|ZP_08814911.1| nitrite reductase (NAD(P)H) small subunit [endosymbiont of Tevnia
jerichonana (vent Tica)]
gi|345126039|gb|EGW55905.1| nitrite reductase (NAD(P)H) small subunit [endosymbiont of Tevnia
jerichonana (vent Tica)]
Length = 109
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 19/118 (16%)
Query: 90 NWVPVVPLSALPK-GERRVIIQDGETILLLWYKDEVFAIENRSPAE-GAYSEGLINAKLT 147
W VV L+ +P G R + +D + + D+V+AI + P + G S+G+++
Sbjct: 3 KWTEVVALAQIPVLGSRMIKTRDMDIAVFRGSDDQVYAIRDACPHKSGPLSQGIMHGT-- 60
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
+ CP DL +G AL P +FPV+ ++ +Y++++
Sbjct: 61 ---SVTCPLHNWRIDLTSG------------EALGPDEGCANVFPVRVEDGLVYLQLQ 103
>gi|30468136|ref|NP_849023.1| ELIP-like protein [Cyanidioschyzon merolae strain 10D]
gi|30409236|dbj|BAC76185.1| ELIP-like protein (chloroplast) [Cyanidioschyzon merolae strain
10D]
Length = 43
Score = 40.8 bits (94), Expect = 0.74, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 244 LEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
++ GFN +E++NG+ A +GF+ L E LTGKG+L G L
Sbjct: 1 MQKLGFNNNAEMLNGRLAMLGFVAALLTEALTGKGVLHFLGVL 43
>gi|339325770|ref|YP_004685463.1| naphthalene 1,2-dioxygenase system ferredoxin subunit [Cupriavidus
necator N-1]
gi|338165927|gb|AEI76982.1| naphthalene 1,2-dioxygenase system ferredoxin subunit [Cupriavidus
necator N-1]
Length = 104
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 48/117 (41%), Gaps = 17/117 (14%)
Query: 89 ENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLT 147
E+W+ LS +P+ + + G+ I L +V+A +N + EG +
Sbjct: 3 ESWIEAALLSDVPQDDVIAVAVQGQEIALYGVDGDVYATDNICTHGHARLCEGFLEGHE- 61
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
I CP + FD+R+GA + P + +PV+ D +Y+ +
Sbjct: 62 ----IECPLHQGRFDIRSGAAK-----------CAPLTENIRTYPVRIDGDKVYLDL 103
>gi|359777463|ref|ZP_09280744.1| putative iron-sulfur protein [Arthrobacter globiformis NBRC 12137]
gi|359305241|dbj|GAB14573.1| putative iron-sulfur protein [Arthrobacter globiformis NBRC 12137]
Length = 286
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 87 GGENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAK 145
G + W PV+ S L GE R + ++LL V A+++ S G EG I
Sbjct: 179 GPKEWTPVMAESELADGEHRKVDAGKVSVLLYRSGSGVLALDSVCSHMGGPLEEGTI--- 235
Query: 146 LTQDGCIVCPTTESTFDLRTGAV 168
DGC+ CP STF L G +
Sbjct: 236 --ADGCVTCPWHGSTFRLGDGHI 256
>gi|300868809|ref|ZP_07113416.1| CAB/ELIP/HLIP-related protein [Oscillatoria sp. PCC 6506]
gi|300333160|emb|CBN58608.1| CAB/ELIP/HLIP-related protein [Oscillatoria sp. PCC 6506]
Length = 56
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 25/39 (64%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN +E +NG+AA +GF L L E TG+GLL G
Sbjct: 17 FGFNDYAERLNGRAAMVGFTLTLIIEYFTGQGLLSWLGL 55
>gi|254526465|ref|ZP_05138517.1| putative high light inducible protein [Prochlorococcus marinus str.
MIT 9202]
gi|221537889|gb|EEE40342.1| putative high light inducible protein [Prochlorococcus marinus str.
MIT 9202]
Length = 81
Score = 40.8 bits (94), Expect = 0.77, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 241 DEDLEGFGFNVTSELINGKAAAIGFLLLLDFELL 274
DE FGFN ++EL+NG+AA IGFL+L+ EL+
Sbjct: 34 DEVKNVFGFNSSAELVNGRAAMIGFLMLILTELV 67
>gi|239636029|ref|ZP_04677043.1| nitrite reductase [NAD(P)H], small subunit [Staphylococcus warneri
L37603]
gi|239598300|gb|EEQ80783.1| nitrite reductase [NAD(P)H], small subunit [Staphylococcus warneri
L37603]
Length = 104
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 18/99 (18%)
Query: 105 RRVIIQDGETILLLWYKDEVFAIENRSP-AEGAYSEGLINAKLTQDGCIVCPTTESTFDL 163
++V + D E L L + E+FA+ N P EG SEG ++ + CP + DL
Sbjct: 21 KKVFVNDKEIGLFLTNEGEIFAVNNICPHKEGPLSEGTVSGSY-----VYCPLHDQKIDL 75
Query: 164 RTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
+TG V++ P + +PV+ + +I+I
Sbjct: 76 KTGNVQE------------PDTGCVKTYPVEIIDGDIFI 102
>gi|166368684|ref|YP_001660957.1| CAB/ELIP/HLIP superfamily protein [Microcystis aeruginosa NIES-843]
gi|390440949|ref|ZP_10229138.1| CAB/ELIP/HLIP superfamily protein [Microcystis sp. T1-4]
gi|425438595|ref|ZP_18818939.1| CAB/ELIP/HLIP superfamily protein [Microcystis aeruginosa PCC 9717]
gi|425465240|ref|ZP_18844550.1| CAB/ELIP/HLIP superfamily protein [Microcystis aeruginosa PCC 9809]
gi|166091057|dbj|BAG05765.1| CAB/ELIP/HLIP superfamily protein [Microcystis aeruginosa NIES-843]
gi|389720503|emb|CCH95815.1| CAB/ELIP/HLIP superfamily protein [Microcystis aeruginosa PCC 9717]
gi|389832549|emb|CCI23725.1| CAB/ELIP/HLIP superfamily protein [Microcystis aeruginosa PCC 9809]
gi|389835719|emb|CCI33264.1| CAB/ELIP/HLIP superfamily protein [Microcystis sp. T1-4]
Length = 70
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 235 EVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 280
E +M VD GF +E +NG+ A IGF+ LL ELLTGKG++
Sbjct: 20 EPKMYVDSS-SSLGFTKNAEKLNGRLAMIGFVSLLAIELLTGKGII 64
>gi|119509183|ref|ZP_01628333.1| CAB/ELIP/HLIP superfamily protein [Nodularia spumigena CCY9414]
gi|119466025|gb|EAW46912.1| CAB/ELIP/HLIP superfamily protein [Nodularia spumigena CCY9414]
Length = 71
Score = 40.8 bits (94), Expect = 0.80, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 235 EVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 280
E ++ +DE + GF +EL+NG+ A IGF+ L+ E+ TG G++
Sbjct: 20 EPKVYIDEQGDRTGFTPYAELLNGRLAMIGFVSLIALEVFTGHGII 65
>gi|227819373|ref|YP_002823344.1| nitrite reductase small subunit [Sinorhizobium fredii NGR234]
gi|227338372|gb|ACP22591.1| nitrite reductase small subunit [Sinorhizobium fredii NGR234]
Length = 110
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 19/118 (16%)
Query: 90 NWVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
NW+ + +S +P +G R V G+ + ++EVFAIE+ P +G S+G+++
Sbjct: 2 NWIAIGEISDIPLRGARCVKTPIGKIAVFRTAENEVFAIEDHCPHKGGPLSQGIVHGN-- 59
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
+ CP L TG +AL + PVK D + I +E
Sbjct: 60 ---AVTCPLHNWVISLETG------------KALGADEGAVRTIPVKNDNGALSIALE 102
>gi|157413879|ref|YP_001484745.1| high light inducible protein [Prochlorococcus marinus str. MIT
9215]
gi|157388454|gb|ABV51159.1| possible high light inducible protein [Prochlorococcus marinus str.
MIT 9215]
Length = 81
Score = 40.8 bits (94), Expect = 0.81, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 241 DEDLEGFGFNVTSELINGKAAAIGFLLLLDFELL 274
DE FGFN ++EL+NG+AA IGFL+L+ EL+
Sbjct: 34 DEVKNVFGFNSSAELVNGRAAMIGFLMLILTELV 67
>gi|397613823|gb|EJK62446.1| hypothetical protein THAOC_16945 [Thalassiosira oceanica]
Length = 387
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 147 TQDGC---IVCPTTESTFDLRTGAVR-DWYPNNPVLRALTPAL---STLYIFPVKTDEKN 199
T DGC IVCP ++ F++++G V+ +W P+ P+L ++ + +L F V+ KN
Sbjct: 221 TGDGCVDCIVCPVHQTAFEIQSGQVQGEWCPHPPILGSIMGYVKPKQSLVKFAVRLRGKN 280
Query: 200 IYIRM 204
+ +R+
Sbjct: 281 VEVRV 285
>gi|56751377|ref|YP_172078.1| ferrochelatase [Synechococcus elongatus PCC 6301]
gi|81298948|ref|YP_399156.1| ferrochelatase [Synechococcus elongatus PCC 7942]
gi|61213232|sp|Q5N2B2.1|HEMH_SYNP6 RecName: Full=Ferrochelatase; AltName: Full=Heme synthase; AltName:
Full=Protoheme ferro-lyase
gi|123557611|sp|Q31S00.1|HEMH_SYNE7 RecName: Full=Ferrochelatase; AltName: Full=Heme synthase; AltName:
Full=Protoheme ferro-lyase
gi|56686336|dbj|BAD79558.1| ferrochelatase [Synechococcus elongatus PCC 6301]
gi|81167829|gb|ABB56169.1| ferrochelatase [Synechococcus elongatus PCC 7942]
Length = 387
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 214 AEIVFSGKAQPGVTATDVNI--EEVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDF 271
+++V QP DV + ++V++ E E +G + +E+ NG+ A +GFL LL
Sbjct: 315 SDLVEQTLEQPRFRLEDVTLLPKKVKLYPQERWE-WGITLNAEVWNGRIAMLGFLALL-V 372
Query: 272 ELLTGKGLLKGTGFL 286
ELLTG+G L G L
Sbjct: 373 ELLTGRGPLHALGLL 387
>gi|119509144|ref|ZP_01628295.1| CAB/ELIP/HLIP-related protein [Nodularia spumigena CCY9414]
gi|119466310|gb|EAW47196.1| CAB/ELIP/HLIP-related protein [Nodularia spumigena CCY9414]
Length = 96
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 26/38 (68%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTG 284
FGFN +E +NG+AA IGFLL++ E T +G+L G
Sbjct: 57 FGFNEYAERLNGRAAMIGFLLMVVIEYSTNQGVLSWLG 94
>gi|338973528|ref|ZP_08628891.1| hypothetical protein CSIRO_1976 [Bradyrhizobiaceae bacterium SG-6C]
gi|414170783|ref|ZP_11426312.1| hypothetical protein HMPREF9696_04167 [Afipia clevelandensis ATCC
49720]
gi|338233123|gb|EGP08250.1| hypothetical protein CSIRO_1976 [Bradyrhizobiaceae bacterium SG-6C]
gi|410884115|gb|EKS31946.1| hypothetical protein HMPREF9696_04167 [Afipia clevelandensis ATCC
49720]
Length = 137
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 12/79 (15%)
Query: 100 LPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINA----------KLTQ 148
+P G R+V+ G I++ K + +A+ NR P EGA S G+I KL++
Sbjct: 12 IPPGHRKVVTVRGREIVVFNVKGDFYALLNRCPHEGANLSRGIITGLPESSAPGCYKLSR 71
Query: 149 DGCIV-CPTTESTFDLRTG 166
G I+ CP FD++TG
Sbjct: 72 PGEILRCPWHGWEFDIKTG 90
>gi|428201693|ref|YP_007080282.1| Chlorophyll A-B binding protein [Pleurocapsa sp. PCC 7327]
gi|427979125|gb|AFY76725.1| Chlorophyll A-B binding protein [Pleurocapsa sp. PCC 7327]
Length = 70
Score = 40.4 bits (93), Expect = 0.85, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 235 EVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 280
E +M VDE ++ GF +E +NG+ A IGF+ LL E++TG G++
Sbjct: 20 EPKMYVDETVQA-GFTEYAEKLNGRLAMIGFVSLLVLEIITGHGIV 64
>gi|422302775|ref|ZP_16390134.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
gi|440752193|ref|ZP_20931396.1| CAB/ELIP/HLIP family protein [Microcystis aeruginosa TAIHU98]
gi|389787931|emb|CCI16778.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
gi|440176686|gb|ELP55959.1| CAB/ELIP/HLIP family protein [Microcystis aeruginosa TAIHU98]
Length = 70
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 235 EVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 280
E +M VD GF +E +NG+ A IGF+ LL ELLTGKG++
Sbjct: 20 EPKMYVDSS-SSLGFTKKAEKLNGRLAMIGFVSLLAIELLTGKGII 64
>gi|343480619|dbj|BAK61715.1| putative ferredoxin [Rhizobium sp. TSY03b]
Length = 101
Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 17/113 (15%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAE-GAYSEGLINAKLTQD 149
W P + LP+GE + E IL+ +V A+++ + + ++G + +D
Sbjct: 3 WTKAFPSADLPEGEMKQFAGAAEPILICKLGGKVHAVQDTCTHDTWSLADGFL-----ED 57
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
G + C + F +RTG V+ PA L +FP K + IYI
Sbjct: 58 GIVECSLHFAKFCVRTGQVK-----------ALPACDALKVFPAKIENDFIYI 99
>gi|17229846|ref|NP_486394.1| CAB/ELIP/HLIP family protein [Nostoc sp. PCC 7120]
gi|75906400|ref|YP_320696.1| CAB/ELIP/HLIP-like protein [Anabaena variabilis ATCC 29413]
gi|17131446|dbj|BAB74053.1| CAB/ELIP/HLIP-related protein [Nostoc sp. PCC 7120]
gi|75700125|gb|ABA19801.1| CAB/ELIP/HLIP-related protein [Anabaena variabilis ATCC 29413]
Length = 56
Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN +E +NG+AA IGFLL++ E T +G+L G
Sbjct: 17 FGFNEYAERLNGRAAMIGFLLMVVIEYATNQGVLSWLGL 55
>gi|81300568|ref|YP_400776.1| CAB/ELIP/HLIP-like protein [Synechococcus elongatus PCC 7942]
gi|81169449|gb|ABB57789.1| CAB/ELIP/HLIP-related protein [Synechococcus elongatus PCC 7942]
Length = 67
Score = 40.4 bits (93), Expect = 0.88, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 243 DLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
D FGFN T+E +NG+ A + F+ L+ FEL T +G L G +
Sbjct: 24 DRPRFGFNETAEKLNGRLAMLAFVTLIAFELTTHEGFLHWLGLV 67
>gi|260429311|ref|ZP_05783288.1| nitrite reductase [Citreicella sp. SE45]
gi|260419934|gb|EEX13187.1| nitrite reductase [Citreicella sp. SE45]
Length = 238
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 21/122 (17%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWY--KDEVFAIENRSPAE-GAYSEGLINAKL 146
+W + + +P+ R + ++ ET + ++ D +FA+E++ P + G S+G+++
Sbjct: 135 DWRFIGTIDDIPRQGARCV-ENNETKIAVFRTADDRIFALEDKCPHKNGPLSQGIVHG-- 191
Query: 147 TQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEG 206
GC+ CP L TG A FPV+ D ++IY+++
Sbjct: 192 ---GCVTCPLHNWVISLETGT------------AQGADEGRTAAFPVRLDGRDIYLQLHP 236
Query: 207 GA 208
GA
Sbjct: 237 GA 238
>gi|220908116|ref|YP_002483427.1| CAB/ELIP/HLIP-like protein [Cyanothece sp. PCC 7425]
gi|219864727|gb|ACL45066.1| CAB/ELIP/HLIP-related protein [Cyanothece sp. PCC 7425]
Length = 54
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN +E +NG+AA IGF L L E +TG+G+L G
Sbjct: 15 FGFNSFAERLNGRAAMIGFTLALLIEYVTGQGILSWLGL 53
>gi|428309315|ref|YP_007120292.1| hypothetical protein Mic7113_0991 [Microcoleus sp. PCC 7113]
gi|428250927|gb|AFZ16886.1| hypothetical protein Mic7113_0991 [Microcoleus sp. PCC 7113]
Length = 56
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN +E +NG+AA IGF+L + E TG+GLL G
Sbjct: 17 FGFNDYAERLNGRAAMIGFILTVIIEYSTGQGLLTWLGL 55
>gi|428208530|ref|YP_007092883.1| hypothetical protein Chro_3559 [Chroococcidiopsis thermalis PCC
7203]
gi|428010451|gb|AFY89014.1| hypothetical protein Chro_3559 [Chroococcidiopsis thermalis PCC
7203]
Length = 74
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 235 EVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 280
E +M VDE GF +EL+NG+ AAIGF+ L+ E+LTG G+
Sbjct: 22 EPKMYVDETPR-IGFTEYAELLNGRLAAIGFVALIAMEVLTGHGIF 66
>gi|403355065|gb|EJY77100.1| Pyridine nucleotide-disulfide oxidoreductase family protein
[Oxytricha trifallax]
Length = 567
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 100 LPKGERRVI-IQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTE 158
+ GE R I + + IL+ Y+++++A+ N P +GA +N + + +VCP
Sbjct: 24 IKDGEMRTISVHGNQKILIAKYQNKLYAVGNTCPHQGA----ALNTGMLINDKVVCPWHG 79
Query: 159 STFDLRTGAVRDW 171
+ FD+++GA+ +
Sbjct: 80 AQFDIKSGALEQF 92
>gi|427410217|ref|ZP_18900419.1| hypothetical protein HMPREF9718_02893 [Sphingobium yanoikuyae ATCC
51230]
gi|425712350|gb|EKU75365.1| hypothetical protein HMPREF9718_02893 [Sphingobium yanoikuyae ATCC
51230]
Length = 109
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 94 VVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLTQDGCI 152
V + +P G + + DGE+ILL +FA+ NR S A+ + G + A G I
Sbjct: 14 VAHVDDVPPGTAKAVDVDGESILLCHSNSRLFAVANRCSHADEPLACGRVRA-----GWI 68
Query: 153 VCPTTESTFDLRTG 166
CP + FDL TG
Sbjct: 69 ACPVHGARFDLETG 82
>gi|325922237|ref|ZP_08184022.1| assimilatory nitrite reductase (NAD(P)H) small subunit [Xanthomonas
gardneri ATCC 19865]
gi|325547271|gb|EGD18340.1| assimilatory nitrite reductase (NAD(P)H) small subunit [Xanthomonas
gardneri ATCC 19865]
Length = 121
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 20/128 (15%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWY--KDEVFAIENRSPAEGA-YSEGLINAKLT 147
W+ V L LP RV+ DG + L+ D+VFA+ +R P +G S+G++ +
Sbjct: 8 WIRVCALQELPALGARVLDIDGIPPIALFRTASDQVFALRDRCPHKGGPLSQGIVAGET- 66
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEGG 207
+ CP L++G +A P + +PVK + ++I ++
Sbjct: 67 ----VTCPLHGWAIALQSG------------QACAPDVGCAPRYPVKVEADAVWIVLQPV 110
Query: 208 ASSDASAE 215
+ DA AE
Sbjct: 111 SQPDAIAE 118
>gi|448319469|ref|ZP_21508965.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Natronococcus amylolyticus DSM 10524]
gi|445607462|gb|ELY61342.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Natronococcus amylolyticus DSM 10524]
Length = 600
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 18/109 (16%)
Query: 95 VPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEG-AYSEGLINAKLTQDGCIV 153
+PL L + R + DG + L ++ EV A++NR P G SEG ++ DG +
Sbjct: 11 IPLEELREQGRAQVSVDGTPLALFHHESEVRAVDNRCPHMGFPLSEGTVD-----DGVLT 65
Query: 154 CPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
C + F+L G D P + +PV+ + ++Y+
Sbjct: 66 CHWHHARFELACGDTFD------------PWADDVQTYPVEIRDGDVYV 102
>gi|209520488|ref|ZP_03269247.1| Rieske (2Fe-2S) domain protein [Burkholderia sp. H160]
gi|209499082|gb|EDZ99178.1| Rieske (2Fe-2S) domain protein [Burkholderia sp. H160]
Length = 120
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 18/117 (15%)
Query: 100 LPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIV-CPTTE 158
L G+R++ DG +I+L + AI+N P GA L + +L +GC++ CP
Sbjct: 13 LSPGQRKLAFIDGRSIVLFNIDGTLHAIDNACPHNGAS---LASGQL--EGCMLRCPAHG 67
Query: 159 STFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEGGASSDASAE 215
FD+RTG + P L T FPV + + + ++ + DA+
Sbjct: 68 LRFDVRTGCM----PGTGGLNVTT--------FPVGIVDSKVVVSLDAPNARDATTH 112
>gi|167577020|ref|ZP_02369894.1| iron-sulfur cluster-binding protein, rieske family [Burkholderia
thailandensis TXDOH]
Length = 109
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 49/116 (42%), Gaps = 17/116 (14%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLTQD 149
W P+ L + E I + + + D+VFA+ + + SEG + +D
Sbjct: 9 WHPLGALDEFTEDEPAARIVGNKPVAVFRVGDDVFALHDLCTHGHARLSEGFV-----ED 63
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
GC+ CP + FD+RTGA + P + +P++ + + I ++
Sbjct: 64 GCVECPLHQGLFDIRTGAPK-----------CAPVTQPVRAYPIRIVDGQVEIHVD 108
>gi|113953147|ref|YP_732027.1| high light inducible protein [Synechococcus sp. CC9311]
gi|113880498|gb|ABI45456.1| possible high light inducible protein [Synechococcus sp. CC9311]
Length = 100
Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%)
Query: 230 DVNIEEVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
++ +E RM G+GF+ +E +NG+ A +GF+ + E++TG+GLL+ G
Sbjct: 45 NIYAKEPRMEYATADAGWGFHSRAEKLNGRLAMLGFVAAIATEMITGEGLLRTIGL 100
>gi|390575775|ref|ZP_10255857.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
terrae BS001]
gi|420255878|ref|ZP_14758749.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Burkholderia sp. BT03]
gi|389932228|gb|EIM94274.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
terrae BS001]
gi|398044196|gb|EJL37033.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Burkholderia sp. BT03]
Length = 136
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 103 GERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIV-CPTTESTF 161
G+R+ + DG I++ ++AI++ P GA L N +L +GC++ CP F
Sbjct: 16 GQRKRVFVDGRCIVVFNVDGAIYAIDDSCPHNGAS---LGNGQL--EGCVLRCPAHGLRF 70
Query: 162 DLRTGA 167
DLRTG
Sbjct: 71 DLRTGC 76
>gi|332706316|ref|ZP_08426379.1| hypothetical protein LYNGBM3L_18120 [Moorea producens 3L]
gi|332354865|gb|EGJ34342.1| hypothetical protein LYNGBM3L_18120 [Moorea producens 3L]
Length = 56
Score = 40.4 bits (93), Expect = 0.99, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 24/34 (70%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 280
FGFN +E +NG+AA IGF+L L E TG+ LL
Sbjct: 17 FGFNDYAERLNGRAAMIGFILTLAIEYFTGQDLL 50
>gi|224825061|ref|ZP_03698167.1| nitrite reductase (NAD(P)H), small subunit [Pseudogulbenkiania
ferrooxidans 2002]
gi|347539285|ref|YP_004846710.1| assimilatory nitrite reductase (NAD(P)H), small subunit
[Pseudogulbenkiania sp. NH8B]
gi|224602732|gb|EEG08909.1| nitrite reductase (NAD(P)H), small subunit [Pseudogulbenkiania
ferrooxidans 2002]
gi|345642463|dbj|BAK76296.1| assimilatory nitrite reductase (NAD(P)H), small subunit
[Pseudogulbenkiania sp. NH8B]
Length = 103
Score = 40.4 bits (93), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 54/119 (45%), Gaps = 20/119 (16%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWY--KDEVFAIENRSPAEGA-YSEGLINAKL 146
NW V ++ +PK RV+ ++G+ + ++ D VFA+ +R P +G S+G+I+
Sbjct: 2 NWKTVCTINDIPKQGARVLKREGQDDIAIFRAEDDYVFALVDRCPHKGGPLSQGIISGHT 61
Query: 147 TQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
+ CP DL+TG A P + PV+ ++ + + ++
Sbjct: 62 -----VACPLHNWVVDLKTG------------EACAPDVGCTGHIPVRVEDGQVSLDLK 103
>gi|402820178|ref|ZP_10869745.1| rieske (2Fe-2S) domain protein [alpha proteobacterium IMCC14465]
gi|402510921|gb|EJW21183.1| rieske (2Fe-2S) domain protein [alpha proteobacterium IMCC14465]
Length = 105
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 25/121 (20%)
Query: 89 ENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-----SPAEGAYSEGLIN 143
+N+V + L E R +G ++L+ D ++A+EN P EG G
Sbjct: 3 DNFVLATGVDTLADNENRAFDLNGVSVLICKTVDGIYAVENMCTHQLQPLEGGRIRGCF- 61
Query: 144 AKLTQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIR 203
+ CP FDL+ G+ P+ ALT + +FPVK + +IY+
Sbjct: 62 --------VFCPLHGQRFDLKDGS--------PI-GALTK--KPIRVFPVKIENDDIYVD 102
Query: 204 M 204
M
Sbjct: 103 M 103
>gi|421599534|ref|ZP_16042728.1| hypothetical protein BCCGELA001_17501, partial [Bradyrhizobium sp.
CCGE-LA001]
gi|404268353|gb|EJZ32839.1| hypothetical protein BCCGELA001_17501, partial [Bradyrhizobium sp.
CCGE-LA001]
Length = 119
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 47/104 (45%), Gaps = 19/104 (18%)
Query: 113 ETILLLWYKDEVFAIE-NRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTG-AVRD 170
E +LL+ DE+FAIE + S G +EGL+ I CP + F LRTG A R
Sbjct: 33 ENVLLVQVGDEIFAIEPSCSHYHGPLAEGLVVGD-----TIRCPWHHACFSLRTGEATR- 86
Query: 171 WYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEGGASSDASA 214
PAL+ L ++ V D I ++ + A SA
Sbjct: 87 -----------PPALNALAVWDVSRDRDKIVVQRKREAPKPTSA 119
>gi|333918679|ref|YP_004492260.1| putative ferredoxin [Amycolicicoccus subflavus DQS3-9A1]
gi|333480900|gb|AEF39460.1| Possible ferredoxin [Amycolicicoccus subflavus DQS3-9A1]
Length = 125
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 88 GENWVPVVPLSALPKGERRVIIQDGETILLLWYKDE-VFAIENRSPAEGA-YSEGLINAK 145
G +PV LS+LP+GE I G + + +++ E +FAI++ + A ++G +
Sbjct: 18 GSAAIPVCALSSLPEGEVATITPPGMSPVSIFHTAEGLFAIDDTCTHQDASLADGWV--- 74
Query: 146 LTQDGCIV-CPTTESTFDLRTG 166
+ C V CP E+ FDLRTG
Sbjct: 75 ---ENCTVECPLHEACFDLRTG 93
>gi|311745361|ref|ZP_07719146.1| nitrite reductase [NAD(P)H], small subunit [Algoriphagus sp. PR1]
gi|126577903|gb|EAZ82123.1| nitrite reductase [NAD(P)H], small subunit [Algoriphagus sp. PR1]
Length = 107
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Query: 97 LSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPT 156
L+ +PK + ++ I LL +D A + P GA L+ Q G I+CP
Sbjct: 14 LNMIPKQSIKKVLVGEHKIALLRIEDNFHAFQASCPHRGA---SLLEGTFNQRGEIICPL 70
Query: 157 TESTFDLRTGAVR 169
FDL TG V+
Sbjct: 71 HHYRFDLNTGDVK 83
>gi|297538037|ref|YP_003673806.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Methylotenera versatilis 301]
gi|297257384|gb|ADI29229.1| Rieske (2Fe-2S) iron-sulfur domain protein [Methylotenera
versatilis 301]
Length = 109
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 17/121 (14%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDG 150
W+ V ++ G R + D +IL+ +A+ENR E A L++ L D
Sbjct: 4 WIDVAAVADFLPGTCRKVSTDESSILVFNLDGRYYAVENRCTHEDA---ELLDGVLEGDE 60
Query: 151 CIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEGGASS 210
I+CP + F + TGAV D PA L FPV+ N ++ ++ A
Sbjct: 61 -IICPLHGARFSVVTGAVLD-----------PPAYENLCTFPVRV--TNGWVEVDAEAEW 106
Query: 211 D 211
D
Sbjct: 107 D 107
>gi|425437939|ref|ZP_18818351.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
gi|425451888|ref|ZP_18831707.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
gi|443661750|ref|ZP_21132778.1| CAB/ELIP/HLIP superfamily protein [Microcystis aeruginosa
DIANCHI905]
gi|159029709|emb|CAO87787.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|389676939|emb|CCH94070.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
gi|389766584|emb|CCI07833.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
gi|443332236|gb|ELS46855.1| CAB/ELIP/HLIP superfamily protein [Microcystis aeruginosa
DIANCHI905]
Length = 70
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 235 EVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 280
E +M VD GF +E +NG+ A IGF+ LL ELLTGKG++
Sbjct: 20 EPKMYVDSS-SSLGFTKKAEKLNGRLAMIGFVSLLAIELLTGKGIV 64
>gi|298491082|ref|YP_003721259.1| ferrochelatase ['Nostoc azollae' 0708]
gi|298233000|gb|ADI64136.1| ferrochelatase ['Nostoc azollae' 0708]
Length = 387
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 212 ASAEIVFSGKAQPGVTATDVNI--EEVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLL 269
A A++V +P + + V + V+M E E +G ++E+ NG+ A +GF+ L+
Sbjct: 313 ALADLVIESLGKPSLKLSQVTQMKKRVKMYPQERWE-WGLTTSAEVWNGRIAMLGFIALI 371
Query: 270 DFELLTGKGLLKGTGFL 286
E++TG+GLL G L
Sbjct: 372 -IEIVTGRGLLHVIGIL 387
>gi|167615195|ref|ZP_02383830.1| iron-sulfur cluster-binding protein, rieske family [Burkholderia
thailandensis Bt4]
Length = 109
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLTQD 149
W P+ L + E I + + + D+VFA+ + + SEG + +D
Sbjct: 9 WHPLGTLDEFTEDEPAARIVGNKPVAVFRVGDDVFALHDLCTHGHARLSEGFV-----ED 63
Query: 150 GCIVCPTTESTFDLRTGA 167
GC+ CP + FD+RTGA
Sbjct: 64 GCVECPLHQGLFDIRTGA 81
>gi|443478182|ref|ZP_21067965.1| ferrochelatase [Pseudanabaena biceps PCC 7429]
gi|443016571|gb|ELS31205.1| ferrochelatase [Pseudanabaena biceps PCC 7429]
Length = 49
Score = 40.0 bits (92), Expect = 1.1, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
FGFN +E NG+ A +GF++ L ELLTG+G+L G +
Sbjct: 10 FGFNNFAETWNGRLAMLGFVIGLATELLTGQGILSQIGLM 49
>gi|408381509|ref|ZP_11179058.1| Rieske (2Fe-2S) domain-containing protein [Methanobacterium
formicicum DSM 3637]
gi|407815976|gb|EKF86539.1| Rieske (2Fe-2S) domain-containing protein [Methanobacterium
formicicum DSM 3637]
Length = 117
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 9/118 (7%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLTQD 149
+ V + L GE + ++ +G IL+ D+ F +N+ P G S+G + +
Sbjct: 3 FTEVCKTNDLDDGEMKKLVLEGFDILIARSGDDFFVADNKCPHMGGNLSQGTLEGTI--- 59
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALST---LYIFPVKTDEKNIYIRM 204
I CP S F+L+ G V W + + L I+ +K ++ ++ +
Sbjct: 60 --ITCPVHHSKFNLKNGEVIRWTDFTGFKLTIAKLFKSPKPLKIYEIKVEDDKVFAEL 115
>gi|56752342|ref|YP_173043.1| CAB/ELIP/HLIP-like protein [Synechococcus elongatus PCC 6301]
gi|56687301|dbj|BAD80523.1| CAB/ELIP/HLIP-related protein [Synechococcus elongatus PCC 6301]
Length = 56
Score = 40.0 bits (92), Expect = 1.1, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 243 DLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
D FGFN T+E +NG+ A + F+ L+ FEL T +G L G +
Sbjct: 13 DRPRFGFNETAEKLNGRLAMLAFVTLIAFELTTHEGFLHWLGLV 56
>gi|378764002|ref|YP_005192618.1| Putatuve nitrite reductase small subunit [Sinorhizobium fredii
HH103]
gi|365183630|emb|CCF00479.1| Putatuve nitrite reductase small subunit [Sinorhizobium fredii
HH103]
Length = 110
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 19/118 (16%)
Query: 90 NWVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
NW+ + +S +P +G R V G+ + ++EVFAIE+ P +G S+G+++
Sbjct: 2 NWIAIGDISDIPLRGARCVKTPIGKIAVFRTAENEVFAIEDHCPHKGGPLSQGIVHGT-- 59
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
+ CP L TG +AL + PVK D + I +E
Sbjct: 60 ---AVTCPLHNWVISLETG------------KALGADDGAVRTIPVKNDNGALSIALE 102
>gi|380300790|ref|ZP_09850483.1| ferredoxin subunits of nitrite reductase and ring-hydroxylating
dioxygenase [Brachybacterium squillarum M-6-3]
Length = 149
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 13/119 (10%)
Query: 90 NWVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA--YSEGLINAKL 146
W+ V L L + R ++ D + L L V A+ N P GA S G++ ++
Sbjct: 40 RWLRVCELGDLEVERGRAALLDDAQVALFLLVDGTVRAVANLDPFSGAQVISRGIVGSRG 99
Query: 147 TQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
I P + FDLRTG D +PV L ++PV+ + +++ + +E
Sbjct: 100 AAT-TIASPMYKQIFDLRTGHCLDAQGKDPV---------HLRVWPVRIEGEDVMLGLE 148
>gi|162451762|ref|YP_001614129.1| nitrite reductase small subunit [Sorangium cellulosum So ce56]
gi|161162344|emb|CAN93649.1| Nitrite reductase small subunit, probable [Sorangium cellulosum So
ce56]
Length = 105
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 51/118 (43%), Gaps = 23/118 (19%)
Query: 96 PLSALPKGERRVIIQDGETILLLWYKD-EVFAIENRSPAEGA-YSEGLINAKLTQDGC-I 152
PLSA+P GE R E I + +D VFA + P G +GL+ GC +
Sbjct: 7 PLSAIPPGEGRAFEVGSERIAVFVARDGRVFATQASCPHRGGPLVDGLLG------GCTL 60
Query: 153 VCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKN-IYIRMEGGAS 209
+CP F+L TG AL+ L +PV+ N I +R+EGG
Sbjct: 61 ICPLHARKFNLETG------------EALSGG-EGLKTYPVRLSATNQILVRVEGGGG 105
>gi|186684118|ref|YP_001867314.1| CAB/ELIP/HLIP family protein [Nostoc punctiforme PCC 73102]
gi|186466570|gb|ACC82371.1| CAB/ELIP/HLIP-related protein [Nostoc punctiforme PCC 73102]
Length = 56
Score = 40.0 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN +E +NG+AA IGF L+L E +T +G+L G
Sbjct: 17 FGFNEYAERLNGRAAMIGFALMLVIEYVTNQGVLSWLGL 55
>gi|398889005|ref|ZP_10642965.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Pseudomonas sp. GM55]
gi|398189896|gb|EJM77151.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Pseudomonas sp. GM55]
Length = 85
Score = 40.0 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 15/82 (18%)
Query: 123 EVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALT 182
E FA +N + L++ +DGCI CP ++TFD+RTGA +
Sbjct: 18 EFFATDNIC----THQHALLSEGYLEDGCIECPLHQATFDVRTGAAQ-----------CA 62
Query: 183 PALSTLYIFPVKTDEKNIYIRM 204
PA + L + VK + + + +
Sbjct: 63 PATAPLKTYAVKVEGNAVLVNL 84
>gi|253698798|ref|YP_003019987.1| Rieske (2Fe-2S) domain-containing protein [Geobacter sp. M21]
gi|251773648|gb|ACT16229.1| Rieske (2Fe-2S) domain protein [Geobacter sp. M21]
Length = 100
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 15/106 (14%)
Query: 97 LSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPT 156
+S +P+ ++++ G +LL+ K V+A E P +GA +G A + + G + CP
Sbjct: 7 VSEVPEFGKKLVEAGGVQVLLVKTKGTVYACEAECPHQGAPLQG---AFIKEAGRLSCPR 63
Query: 157 TESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
FDL TGA D TL ++PV+ ++++
Sbjct: 64 HGYRFDLATGACADHQEY------------TLKVYPVEIRGDDVFV 97
>gi|161520530|ref|YP_001583957.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia multivorans
ATCC 17616]
gi|189353280|ref|YP_001948907.1| ferredoxin subunit of phenylpropionate dioxygenase [Burkholderia
multivorans ATCC 17616]
gi|221196077|ref|ZP_03569124.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
multivorans CGD2M]
gi|221202750|ref|ZP_03575769.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
multivorans CGD2]
gi|221209770|ref|ZP_03582751.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
multivorans CGD1]
gi|416956290|ref|ZP_11935876.1| ferredoxin subunit of phenylpropionate dioxygenase [Burkholderia
sp. TJI49]
gi|421469060|ref|ZP_15917550.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans ATCC
BAA-247]
gi|421475946|ref|ZP_15923876.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans CF2]
gi|160344580|gb|ABX17665.1| Rieske (2Fe-2S) domain protein [Burkholderia multivorans ATCC
17616]
gi|189337302|dbj|BAG46371.1| ferredoxin subunit of phenylpropionate dioxygenase [Burkholderia
multivorans ATCC 17616]
gi|221170458|gb|EEE02924.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
multivorans CGD1]
gi|221176684|gb|EEE09112.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
multivorans CGD2]
gi|221182631|gb|EEE15031.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
multivorans CGD2M]
gi|325522612|gb|EGD01143.1| ferredoxin subunit of phenylpropionate dioxygenase [Burkholderia
sp. TJI49]
gi|400229401|gb|EJO59252.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans CF2]
gi|400230627|gb|EJO60390.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans ATCC
BAA-247]
Length = 105
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 111 DGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTG 166
DG I + DEV+A+EN P ++ L+ +G + CP E+ FD+RTG
Sbjct: 26 DGVEIGIYRVGDEVYALENVCP----HAYALLTQGFVDEGTVECPLHEAVFDIRTG 77
>gi|187478078|ref|YP_786102.1| dioxygenase system, ferredoxin component [Bordetella avium 197N]
gi|115422664|emb|CAJ49191.1| putative dioxygenase system, ferredoxin component [Bordetella avium
197N]
Length = 102
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 17/106 (16%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAY-SEGLINAKLTQD 149
W + ++ + + E DG + L D +N + A SEG I +D
Sbjct: 3 WKTIANINDIGEDEALAFEHDGAKLALFKSADAFHVTDNICTHQYALLSEGYI-----ED 57
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKT 195
GC+ CP + TFDL +G + PA + ++PV+T
Sbjct: 58 GCVECPLHQGTFDLVSGEAK-----------CAPATQPIRVYPVRT 92
>gi|433678236|ref|ZP_20510118.1| nitrite reductase (NAD(P)H) small subunit [Xanthomonas translucens
pv. translucens DSM 18974]
gi|430816633|emb|CCP40585.1| nitrite reductase (NAD(P)H) small subunit [Xanthomonas translucens
pv. translucens DSM 18974]
Length = 121
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 52/123 (42%), Gaps = 20/123 (16%)
Query: 89 ENWVPVVPLSALPKGERRVIIQDGETILLLWYK--DEVFAIENRSPAEGA-YSEGLINAK 145
W+ + + +P RV+ DG + L+ D VFA+ +R P +G S+G++
Sbjct: 16 RRWIRICRIDEIPSLGARVLQIDGTDPIALFRTAGDRVFALVDRCPHKGGPLSQGIVAGD 75
Query: 146 LTQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
+ CP L +G +A P + +PV+ DE +++ ++
Sbjct: 76 -----SVTCPLHNWNIALDSG------------QACAPDVGCARRYPVRVDEGEVWLSLQ 118
Query: 206 GGA 208
G A
Sbjct: 119 GAA 121
>gi|434400875|ref|YP_007134879.1| hypothetical protein Sta7437_4445 [Stanieria cyanosphaera PCC 7437]
gi|428271972|gb|AFZ37913.1| hypothetical protein Sta7437_4445 [Stanieria cyanosphaera PCC 7437]
Length = 66
Score = 40.0 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
FG N ++E+ NG+ A IGFLL L EL TG+ + GF+
Sbjct: 27 FGSNPSAEIWNGRLAMIGFLLALIIELSTGQSFIHWLGFM 66
>gi|407773445|ref|ZP_11120746.1| Nitrite reductase (NAD(P)H) small subunit [Thalassospira
profundimaris WP0211]
gi|407283909|gb|EKF09437.1| Nitrite reductase (NAD(P)H) small subunit [Thalassospira
profundimaris WP0211]
Length = 116
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 91 WVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENRSP-AEGAYSEGLINAKLTQ 148
WV V P SA+P +G R + + + D+VFA+ +R P +G ++G+++
Sbjct: 7 WVEVGPASAIPQQGARTLQTETDRIAIFRTLDDQVFALLDRCPHKQGPLAQGIVHGHF-- 64
Query: 149 DGCIVCPTTESTFDLRTG 166
+ CP F L TG
Sbjct: 65 ---VTCPLHNMVFSLETG 79
>gi|209527668|ref|ZP_03276166.1| conserved hypothetical protein [Arthrospira maxima CS-328]
gi|376002338|ref|ZP_09780174.1| high light-inducible protein (HLIP), CAB/ELIP/HLIP superfamily
[Arthrospira sp. PCC 8005]
gi|209491896|gb|EDZ92253.1| conserved hypothetical protein [Arthrospira maxima CS-328]
gi|375329332|emb|CCE15927.1| high light-inducible protein (HLIP), CAB/ELIP/HLIP superfamily
[Arthrospira sp. PCC 8005]
Length = 69
Score = 40.0 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 242 EDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 280
E+ + FGFN +E +NG+ A IGF+ L E LTG G++
Sbjct: 25 EEAQQFGFNKYAEKLNGRLAMIGFISALALEALTGHGVI 63
>gi|394988144|ref|ZP_10380982.1| hypothetical protein SCD_00546 [Sulfuricella denitrificans skB26]
gi|393792602|dbj|GAB70621.1| hypothetical protein SCD_00546 [Sulfuricella denitrificans skB26]
Length = 114
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 19/119 (15%)
Query: 89 ENWVPVVPLSALPK-GERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKL 146
+NWV V + +P G R V G+ + DE+FA+ ++ P +G S+G+++ K
Sbjct: 8 QNWVEVGRIEDIPLLGARLVKSPKGDIAVFRTQGDEIFALRDKCPHKGGPLSQGIVHGKK 67
Query: 147 TQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
+ CP + L TG A+ P FPV+ + IY+ +E
Sbjct: 68 -----VACPLHDWKIHLDTGL------------AVAPDEGCAARFPVEVRDGLIYLSLE 109
>gi|167946706|ref|ZP_02533780.1| nitrite reductase (NAD(P)H) small subunit [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 133
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 19/118 (16%)
Query: 90 NWVPVVPLSALPK-GERRVIIQDGETILLLWYKDEVFAIENRSPAE-GAYSEGLINAKLT 147
W VV L+ +P G R + +D + + D+V+AI + P + G S+G+++
Sbjct: 3 KWTEVVALAQIPVLGSRMIKTRDMDIAVFRGSDDQVYAIRDACPHKSGPLSQGIMHGT-- 60
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
+ CP DL +G AL P +FPV+ ++ +Y++++
Sbjct: 61 ---SVTCPLHNWRIDLTSG------------EALGPDEGCANVFPVRVEDGLVYLQLQ 103
>gi|11465821|ref|NP_053965.1| ORF17 [Porphyra purpurea]
gi|1723321|sp|P51355.1|YCF17_PORPU RecName: Full=Uncharacterized protein ycf17; AltName: Full=ORF48
gi|1276821|gb|AAC08241.1| hypothetical chloroplast ORF 17 (chloroplast) [Porphyra purpurea]
Length = 48
Score = 40.0 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 29/41 (70%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFLD 287
+GF ++E NG+ A IGF+ ++ EL+TGKGLL +G ++
Sbjct: 8 WGFTDSAETWNGRFAMIGFMAVIFIELVTGKGLLYLSGLMN 48
>gi|386858270|ref|YP_006271452.1| Nitrite reductase [Deinococcus gobiensis I-0]
gi|380001728|gb|AFD26917.1| Nitrite reductase [Deinococcus gobiensis I-0]
Length = 128
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA--YSEGLINAKL- 146
W V LS + G + G + + EVFA+ NR P GA S GL + L
Sbjct: 19 TWTRVCALSDILPGTGVCALVGGRQVAVFSVAGEVFALGNRDPFTGANVMSRGLTGSYLR 78
Query: 147 --TQDGCIVCPTTESTFDLRTGAVRD 170
TQ+ + P ++ FDLRTG D
Sbjct: 79 GDTQELKVASPLLKNAFDLRTGRSLD 104
>gi|402487395|ref|ZP_10834215.1| 2Fe-2S Rieske nitrite reductase small subunit [Rhizobium sp. CCGE
510]
gi|401813721|gb|EJT06063.1| 2Fe-2S Rieske nitrite reductase small subunit [Rhizobium sp. CCGE
510]
Length = 109
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 90 NWVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
NW+ + +S +P +G R V G+ + ++EVFAIE+ P +G S+G+++ K
Sbjct: 2 NWIAIGDISDIPLRGARCVKTPQGKIAVFRTAENEVFAIEDHCPHKGGPLSQGIVHGK-- 59
Query: 148 QDGCIVCPTTESTFDLRTG 166
+ CP L TG
Sbjct: 60 ---AVTCPLHNWVISLETG 75
>gi|425462260|ref|ZP_18841734.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
gi|389824670|emb|CCI26149.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
Length = 70
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 235 EVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 280
E +M VD GF +E +NG+ A IGF+ LL ELLTGKG++
Sbjct: 20 EPKMYVDSS-SSLGFTKKAEKLNGRLAMIGFVSLLVIELLTGKGII 64
>gi|197116561|ref|YP_002136988.1| Rieske [2Fe-2S] domain-containing protein [Geobacter bemidjiensis
Bem]
gi|197085921|gb|ACH37192.1| ferredoxin, Rieske superfamily [Geobacter bemidjiensis Bem]
Length = 100
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 15/108 (13%)
Query: 97 LSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPT 156
+S +P+ ++++ G +LL+ K V+A E P +GA +G A + + G + CP
Sbjct: 7 VSEVPEFGKKLVEAGGVQVLLVKTKGTVYACEAECPHQGAPLQG---AFIKEAGRLSCPR 63
Query: 157 TESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
FDL TGA D TL ++PV+ +++ +
Sbjct: 64 HGYRFDLATGACADHQEY------------TLKVYPVEIRGDEVFVEV 99
>gi|448353749|ref|ZP_21542522.1| Rieske (2Fe-2S) domain-containing protein [Natrialba hulunbeirensis
JCM 10989]
gi|445639600|gb|ELY92703.1| Rieske (2Fe-2S) domain-containing protein [Natrialba hulunbeirensis
JCM 10989]
Length = 614
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 18/111 (16%)
Query: 93 PVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEG-AYSEGLINAKLTQDGC 151
P V L AL K R ++ DG + + + EV A+ NR P G EG ++ DG
Sbjct: 15 PAVSLEALEKAGRELMSIDGTPLAIFAHDGEVRAVNNRCPHMGFPLVEGTVD-----DGI 69
Query: 152 IVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
+ C + F+L G D P + +PV+ + +Y+
Sbjct: 70 LTCHWHHARFELSCGDTFD------------PWADDVQTYPVEIRDGTVYV 108
>gi|434387735|ref|YP_007098346.1| Chlorophyll A-B binding protein [Chamaesiphon minutus PCC 6605]
gi|428018725|gb|AFY94819.1| Chlorophyll A-B binding protein [Chamaesiphon minutus PCC 6605]
Length = 52
Score = 40.0 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
FGF ++EL+NG+ A IGF+ L EL+TG+G L G +
Sbjct: 13 FGFTPSAELLNGRLAMIGFVAALITELVTGQGTLHFLGLM 52
>gi|123966711|ref|YP_001011792.1| high light inducible protein [Prochlorococcus marinus str. MIT
9515]
gi|123201077|gb|ABM72685.1| possible high light inducible protein [Prochlorococcus marinus str.
MIT 9515]
Length = 92
Score = 40.0 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 241 DEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFLDFIYSV 292
DE FGFN ++EL+NG+AA +GF +LL EL +LKG I+ +
Sbjct: 45 DEVKNVFGFNSSAELVNGRAAMVGFFMLLLTEL-----VLKGRPVTSSIFGI 91
>gi|428223317|ref|YP_007107487.1| Chlorophyll A-B binding protein [Synechococcus sp. PCC 7502]
gi|427996657|gb|AFY75352.1| Chlorophyll A-B binding protein [Synechococcus sp. PCC 7502]
Length = 55
Score = 40.0 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
FGFN +E NG+ A IGFL L E +TG G+L G L
Sbjct: 16 FGFNAFAETWNGRLAMIGFLTALINEYVTGHGILSQLGLL 55
>gi|398819929|ref|ZP_10578472.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Bradyrhizobium sp. YR681]
gi|398229394|gb|EJN15473.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Bradyrhizobium sp. YR681]
Length = 137
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 38/85 (44%), Gaps = 12/85 (14%)
Query: 94 VVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEG-AYSEG-LINAKLTQD-- 149
+ P+ LP G R+ + DG I + K E F + NR P +G A EG LI + D
Sbjct: 6 IAPVDELPPGTRKFLEIDGRPIAIFNIKGEYFGLMNRCPHQGAALCEGPLIGLAQSSDPG 65
Query: 150 --------GCIVCPTTESTFDLRTG 166
I CP FD+RTG
Sbjct: 66 EIEYTKLGEIIRCPWHGWEFDIRTG 90
>gi|414078527|ref|YP_006997845.1| ferrochelatase [Anabaena sp. 90]
gi|413971943|gb|AFW96032.1| ferrochelatase [Anabaena sp. 90]
Length = 388
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 212 ASAEIVFSGKAQPGVTATDVNIEEVRM-VVDEDLEGFGFNVTSELINGKAAAIGFLLLLD 270
A ++++ QP + + V + R+ + ++ +G ++E+ NG+ A +GF+ L+
Sbjct: 313 ALSDLIIDALKQPDLKLSQVTQMKKRVKMYPQERWAWGITTSAEVWNGRIAMLGFIGLI- 371
Query: 271 FELLTGKGLLKGTGFLD 287
EL+TGKGLL G L
Sbjct: 372 IELVTGKGLLHVVGLLH 388
>gi|186682831|ref|YP_001866027.1| high light inducible protein [Nostoc punctiforme PCC 73102]
gi|186465283|gb|ACC81084.1| CAB/ELIP/HLIP superfamily [Nostoc punctiforme PCC 73102]
Length = 71
Score = 40.0 bits (92), Expect = 1.4, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 235 EVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 280
E ++ +DE + GF +E++NG+ A IGF+ L+ E+ TG G++
Sbjct: 20 EPKVYIDEQGDRTGFTPYAEMLNGRLAMIGFISLIALEVFTGHGIV 65
>gi|301604208|ref|XP_002931767.1| PREDICTED: apoptosis-inducing factor 3-like [Xenopus (Silurana)
tropicalis]
Length = 535
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Query: 94 VVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIV 153
V + L G+ R + LL+ E +A+ ++ P GA L+ L++ G +
Sbjct: 72 VCHVKDLENGQMREVDLGCGKALLVKQNGEYYAMGHKCPHYGA---PLVKGVLSK-GRVR 127
Query: 154 CPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEGGASSDAS 213
CP + F++ TG + D+ P L L F VK +++ +YIR S D+
Sbjct: 128 CPWHGACFNIATGDIEDF-----------PGLDALPKFQVKIEKERVYIR-ASKQSMDSQ 175
Query: 214 AEIVF 218
AE +F
Sbjct: 176 AEQIF 180
>gi|167566659|ref|ZP_02359575.1| iron-sulfur cluster-binding protein, rieske family [Burkholderia
oklahomensis EO147]
gi|167573734|ref|ZP_02366608.1| iron-sulfur cluster-binding protein, rieske family [Burkholderia
oklahomensis C6786]
Length = 109
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLTQD 149
W P+ L + E + + + D+VFA+ + + SEG I +D
Sbjct: 9 WHPLGALDEFTEDEPAARVVGNRPVAVFRIGDDVFALHDLCTHGHARLSEGFI-----ED 63
Query: 150 GCIVCPTTESTFDLRTGA 167
GC+ CP + FD+RTGA
Sbjct: 64 GCVECPLHQGLFDIRTGA 81
>gi|322796113|gb|EFZ18689.1| hypothetical protein SINV_02158 [Solenopsis invicta]
Length = 554
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 26/109 (23%)
Query: 89 ENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQ 148
EN + V+PL DG+ ILL+ K E+ AI + GA L++
Sbjct: 19 ENEMKVLPLG-----------DDGKKILLVKQKGELHAIGTKCTHYGA----LLHTGALT 63
Query: 149 DGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDE 197
+G + CP + F+++TG + D+ P L +L + V+ DE
Sbjct: 64 EGRVRCPWHGACFNIKTGDIEDY-----------PGLDSLPCYKVRVDE 101
>gi|448322663|ref|ZP_21512133.1| pyrrolo-quinoline quinone beta-propeller repeat protein
[Natronococcus amylolyticus DSM 10524]
gi|445601421|gb|ELY55410.1| pyrrolo-quinoline quinone beta-propeller repeat protein
[Natronococcus amylolyticus DSM 10524]
Length = 528
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 15/117 (12%)
Query: 102 KGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTEST- 160
+G V + DGE Y +V + + EG EG + A +T+D PT ++
Sbjct: 245 QGYVAVAMDDGEGP----YPSDVVLYDTETGEEGERYEGNVPATITEDRVYTNPTYDAAG 300
Query: 161 FDLRTGAVRDWYPNNPVLRALTPALSTLYIF---------PVKTDEKNIYIRMEGGA 208
FD TG + W P+ PV +A P + I+ P + DE +++ E GA
Sbjct: 301 FDRETGG-QVWEPDQPVKQAQQPVVGEDGIYVGIDGTQEDPDEEDEHGLFVFDEDGA 356
>gi|123969048|ref|YP_001009906.1| high light inducible protein [Prochlorococcus marinus str. AS9601]
gi|123199158|gb|ABM70799.1| possible high light inducible protein [Prochlorococcus marinus str.
AS9601]
Length = 81
Score = 39.7 bits (91), Expect = 1.5, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 26/34 (76%)
Query: 241 DEDLEGFGFNVTSELINGKAAAIGFLLLLDFELL 274
DE FGFN ++EL+NG+AA +GFL+L+ EL+
Sbjct: 34 DEVKNVFGFNSSAELVNGRAAMVGFLMLILTELV 67
>gi|443477051|ref|ZP_21066924.1| hypothetical protein Pse7429DRAFT_2805 [Pseudanabaena biceps PCC
7429]
gi|443017890|gb|ELS32240.1| hypothetical protein Pse7429DRAFT_2805 [Pseudanabaena biceps PCC
7429]
Length = 68
Score = 39.7 bits (91), Expect = 1.5, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 235 EVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 280
E +M V+E + GF +EL+NG+ A IGF+ LL E+ TG GL+
Sbjct: 18 EPKMYVEES-DRAGFTPYAELLNGRLAMIGFVSLLILEVFTGHGLI 62
>gi|339322061|ref|YP_004680955.1| ferredoxin [Cupriavidus necator N-1]
gi|338168669|gb|AEI79723.1| ferredoxin of a ring-hydroxylating dioxygenase [Cupriavidus necator
N-1]
Length = 101
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 15/83 (18%)
Query: 122 DEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRAL 181
D+ F +N + A L++ +DGCI CP ++ FD+R+G
Sbjct: 34 DQYFVTDNVCTHQYA----LLSDGYLEDGCIECPLHQARFDIRSGKA-----------MC 78
Query: 182 TPALSTLYIFPVKTDEKNIYIRM 204
PA S + +PVK ++ +++ +
Sbjct: 79 APATSDIRTYPVKFEDSRVWVEL 101
>gi|449136023|ref|ZP_21771446.1| protein containing Rieske [2Fe-2S] iron-sulfur domain protein
[Rhodopirellula europaea 6C]
gi|448885314|gb|EMB15762.1| protein containing Rieske [2Fe-2S] iron-sulfur domain protein
[Rhodopirellula europaea 6C]
Length = 102
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLTQD 149
W V ++ +P G +++I D E I L +AI++ P +GA SEGL+
Sbjct: 3 WFKVACVADVPPGTGQMVIADDELIALFNIDGTFYAIDDACPHQGAPLSEGLVK------ 56
Query: 150 GCI-VCPTTESTFDL 163
GC+ VCP + FD+
Sbjct: 57 GCVTVCPWHGAEFDV 71
>gi|443313415|ref|ZP_21043026.1| Chlorophyll A-B binding protein [Synechocystis sp. PCC 7509]
gi|442776358|gb|ELR86640.1| Chlorophyll A-B binding protein [Synechocystis sp. PCC 7509]
Length = 68
Score = 39.7 bits (91), Expect = 1.5, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 216 IVFSGKAQPGVTATDVNIEEVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLT 275
I FS AQP +++ + FGFN +E +NG+AA IGF +++ E +T
Sbjct: 7 ISFSMNAQPQQPTITPKLQQPK---------FGFNEYAERLNGRAAMIGFSIMVIIEYVT 57
Query: 276 GKGLLKGTGF 285
+G+L G
Sbjct: 58 NQGMLAWLGL 67
>gi|418323105|ref|ZP_12934397.1| nitrite reductase [NAD(P)H], small subunit [Staphylococcus
pettenkoferi VCU012]
gi|365230334|gb|EHM71437.1| nitrite reductase [NAD(P)H], small subunit [Staphylococcus
pettenkoferi VCU012]
Length = 104
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 19/115 (16%)
Query: 92 VPVVPLSAL-PKGERRVIIQDGETILLLWYKDEVFAIENRSPA-EGAYSEGLINAKLTQD 149
+ V LS L P ++VI+ D E L L E+ AI N P +G SEG ++ +
Sbjct: 7 IKVAELSELTPLIGKKVIVGDLEIGLFLTESGEIHAINNICPHKQGPLSEGTVSGEY--- 63
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
+ CP + DL TG V++ P + ++ V D ++YI +
Sbjct: 64 --VYCPLHDQKIDLNTGEVQE------------PDTGCVSVYEVTVDNGDVYICL 104
>gi|116694749|ref|YP_728960.1| ferredoxin of a ring-hydroxylating dioxygenase [Ralstonia eutropha
H16]
gi|113529248|emb|CAJ95595.1| ferredoxin of a ring-hydroxylating dioxygenase [Ralstonia eutropha
H16]
Length = 101
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 15/83 (18%)
Query: 122 DEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRAL 181
D+ F +N + A L++ +DGCI CP ++ FD+R+G
Sbjct: 34 DQYFVTDNVCTHQYA----LLSDGYLEDGCIECPLHQARFDIRSGKA-----------MC 78
Query: 182 TPALSTLYIFPVKTDEKNIYIRM 204
PA S + +PVK ++ +++ +
Sbjct: 79 APATSDIRTYPVKFEDSRVWVEL 101
>gi|110681285|ref|YP_684292.1| assimilatory nitrite reductase, small subunit [Roseobacter
denitrificans OCh 114]
gi|109457401|gb|ABG33606.1| assimilatory nitrite reductase, small subunit [Roseobacter
denitrificans OCh 114]
Length = 111
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 90 NWVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENRSPAE-GAYSEGLINAKLT 147
+W+ + PL +P +G R V G + +DEVFA++N P + G +EG+++ K
Sbjct: 3 DWIDIAPLENVPMRGARMVKTAFGCVAVFRTAEDEVFALDNACPHKAGPLAEGIVHGK-- 60
Query: 148 QDGCIVCPTTESTFDLRTG 166
+ CP L TG
Sbjct: 61 ---SVTCPLHNWVISLETG 76
>gi|427717467|ref|YP_007065461.1| hypothetical protein Cal7507_2188 [Calothrix sp. PCC 7507]
gi|427349903|gb|AFY32627.1| hypothetical protein Cal7507_2188 [Calothrix sp. PCC 7507]
Length = 109
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN +E +NG+AA IGF+L++ E +T +G++ G
Sbjct: 70 FGFNEYAERLNGRAAMIGFILMVLIEYVTNQGVISWLGL 108
>gi|37526120|ref|NP_929464.1| 3-phenylpropionate dioxygenase ferredoxin subunit [Photorhabdus
luminescens subsp. laumondii TTO1]
gi|81419459|sp|Q7N4V8.1|HCAC_PHOLL RecName: Full=3-phenylpropionate/cinnamic acid dioxygenase
ferredoxin subunit; AltName: Full=Digoxigenin ferredoxin
subunit
gi|36785550|emb|CAE14499.1| 3-phenylpropionate dioxygenase ferredoxin subunit (digoxigenin
ferredoxin subunit) [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 105
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 19/113 (16%)
Query: 94 VVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLTQDGCI 152
V + LP G R + + I L Y E FA+++R S + SEG + T +
Sbjct: 6 VCTVEELPDGGARKV-EYTPDIALFHYDGEFFAVDDRCSHGNASISEGYLEDNAT----V 60
Query: 153 VCPTTESTFDLRTGAVRDWYPNNPVLRALT-PALSTLYIFPVKTDEKNIYIRM 204
CP ++F LRTG +AL PA L +PV + NIYI +
Sbjct: 61 ECPLHTASFCLRTG------------KALCLPATDPLKTYPVVVKDGNIYITV 101
>gi|298676072|ref|YP_003727822.1| rieske (2Fe-2S) iron-sulfur domain-containing protein
[Methanohalobium evestigatum Z-7303]
gi|298289060|gb|ADI75026.1| Rieske (2Fe-2S) iron-sulfur domain protein [Methanohalobium
evestigatum Z-7303]
Length = 106
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 16/119 (13%)
Query: 89 ENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQ 148
E+WV + S+L + I +G ILL+ E++A+ N+ A+ E L++ +
Sbjct: 3 ESWVFAIDESSLQDNSLKGIKLEGNLILLVKIDREIYALSNKC----AHMECLLSKGSLE 58
Query: 149 DGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEGG 207
+ CP + FD+RTG +T + + K E +IY+ +E G
Sbjct: 59 GYTVKCPCHDWKFDVRTGEF------------VTANEIKIPTYQTKISEGSIYVNLEEG 105
>gi|254490788|ref|ZP_05103971.1| nitrite reductase (NAD(P)H), small subunit [Methylophaga
thiooxidans DMS010]
gi|224463960|gb|EEF80226.1| nitrite reductase (NAD(P)H), small subunit [Methylophaga
thiooxydans DMS010]
Length = 101
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 90 NWVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQ 148
+W V PL+ +P KG R + DG+ + DEVFA+ +R P + G ++ +
Sbjct: 2 SWTEVGPLADIPNKGSRVLETPDGDVAVFRTAGDEVFALFDRCP----HKHGPLSQGIVY 57
Query: 149 DGCIVCPTTESTFDLRTG 166
D + CP D+ +G
Sbjct: 58 DKRVACPLHNWVIDMESG 75
>gi|186474196|ref|YP_001861538.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia phymatum
STM815]
gi|184196528|gb|ACC74492.1| Rieske (2Fe-2S) domain protein [Burkholderia phymatum STM815]
Length = 521
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 48/109 (44%), Gaps = 19/109 (17%)
Query: 96 PLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSE--GLINAKLTQDGCIV 153
PLS L + I +G ILL+ D V A P GA E L N +L V
Sbjct: 11 PLSELADNGMKRIEANGTPILLIRRGDTVHAYSADCPHAGAPLEQGALCNGRL------V 64
Query: 154 CPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
CP + TFD+ TGA+ + P P+ R +PV+ + ++ +
Sbjct: 65 CPWHKGTFDIATGALVEPPPLRPLTR-----------YPVRIEHGDVLV 102
>gi|167839495|ref|ZP_02466179.1| naphthalene 1,2-dioxygenase system ferredoxin component
[Burkholderia thailandensis MSMB43]
Length = 105
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 111 DGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTG 166
DG I + DE+ A+EN P ++ L+ DG + CP E+ FD+RTG
Sbjct: 26 DGVEIGIYRVGDELHALENVCP----HAYALLTQGFVDDGTVECPLHEAVFDIRTG 77
>gi|386816713|ref|ZP_10103931.1| assimilatory nitrite reductase (NAD(P)H) small subunit [Thiothrix
nivea DSM 5205]
gi|386421289|gb|EIJ35124.1| assimilatory nitrite reductase (NAD(P)H) small subunit [Thiothrix
nivea DSM 5205]
Length = 108
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 19/123 (15%)
Query: 90 NWVPVVPLSALPK-GERRVIIQDGETILLLWYKDEVFAIENRSPAE-GAYSEGLINAKLT 147
NW+ +V L ++P G R V D + D+V+AI + P + G S+G+++
Sbjct: 3 NWIEIVELESIPVLGSRVVKTPDMNIAVFRGRDDQVYAIRDACPHKNGPLSQGIMHGST- 61
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEGG 207
+ CP DL +G +A+ P +F K + +++++ G
Sbjct: 62 ----VTCPLHNWKIDLTSG------------QAMGPDEGCTNVFATKVENGKVFLQLAVG 105
Query: 208 ASS 210
A++
Sbjct: 106 AAA 108
>gi|428778229|ref|YP_007170016.1| CAB/ELIP/HLIP superfamily protein [Halothece sp. PCC 7418]
gi|428692508|gb|AFZ45802.1| putative CAB/ELIP/HLIP superfamily protein [Halothece sp. PCC 7418]
Length = 49
Score = 39.7 bits (91), Expect = 1.7, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
FGFN ++E NG+ A IGF+ L E+L+G+G+L G L
Sbjct: 10 FGFNTSAENWNGRLAMIGFVAALLTEILSGQGVLHFWGLL 49
>gi|448376920|ref|ZP_21559920.1| Rieske (2Fe-2S) domain-containing protein [Halovivax asiaticus JCM
14624]
gi|445656656|gb|ELZ09490.1| Rieske (2Fe-2S) domain-containing protein [Halovivax asiaticus JCM
14624]
Length = 623
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 52/115 (45%), Gaps = 18/115 (15%)
Query: 89 ENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEG-AYSEGLINAKLT 147
+ +VPVV +AL R+++ +G I L ++ V A++NR P G S+G +
Sbjct: 11 DGFVPVVDAAALESEGRKLVTPEGTAIALFHHEGAVRAVDNRCPHMGFPLSDGTV----- 65
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
++G + C + F+L G D P + +PV+ + +++
Sbjct: 66 EEGILTCHWHHARFELSCGDTFD------------PWADDVQTYPVEIRDGTVHV 108
>gi|406835978|ref|ZP_11095572.1| hypothetical protein SpalD1_30184 [Schlesneria paludicola DSM
18645]
Length = 104
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 15/110 (13%)
Query: 94 VVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIV 153
V +S + G R I+ D LL+ DE FAIE+ +G + L N + ++ I
Sbjct: 7 VAAVSEIQPGGRLSILVDDIPSLLVRIGDEFFAIEDVCSHDG---QPLTNGPV-ENCAIT 62
Query: 154 CPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIR 203
CP + FDLRTG P+ PA+ + +F V+ I++R
Sbjct: 63 CPRHGARFDLRTG--------RPL---CMPAIEPITVFEVQVRGDEIFVR 101
>gi|423066287|ref|ZP_17055077.1| hypothetical protein SPLC1_S411850 [Arthrospira platensis C1]
gi|406712329|gb|EKD07518.1| hypothetical protein SPLC1_S411850 [Arthrospira platensis C1]
Length = 69
Score = 39.7 bits (91), Expect = 1.7, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 242 EDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 280
E+ + FGFN +E +NG+ A IGF+ L E LTG G++
Sbjct: 25 EESQQFGFNKYAEKLNGRLAMIGFISALALEALTGHGVI 63
>gi|452844227|gb|EME46161.1| hypothetical protein DOTSEDRAFT_125938 [Dothistroma septosporum
NZE10]
Length = 554
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 14/88 (15%)
Query: 116 LLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTGAVRDWYPNN 175
LL +KDEV A+ SP Y L LT DG + CP + F+++TG + D
Sbjct: 35 LLAKFKDEVHAL---SPKCTHYGAPLSKGVLTPDGRLTCPWHGACFNVKTGDIED----- 86
Query: 176 PVLRALTPALSTLYIFPVKTDEKNIYIR 203
PA L F + E +YI+
Sbjct: 87 ------APAPDPLQKFEIVQKEGEVYIK 108
>gi|148239267|ref|YP_001224654.1| high light inducible protein [Synechococcus sp. WH 7803]
gi|147847806|emb|CAK23357.1| High light inducible protein [Synechococcus sp. WH 7803]
Length = 77
Score = 39.7 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 230 DVNIEEVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
+V +E M + G+GF+ +E +NG+ A +GF+ + ELLTG+GLL+ G
Sbjct: 22 NVYAKEPPMQLTSPEAGWGFHERAERLNGRLAMLGFVAAIATELLTGEGLLQAIGL 77
>gi|453053705|gb|EMF01166.1| nitrite reductase (NAD(P)H), small subunit [Streptomyces
mobaraensis NBRC 13819 = DSM 40847]
Length = 146
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 18/114 (15%)
Query: 88 GENWVPVVPLSALPKGERRVIIQDGETILLLWYKDE---VFAIENRSPAEGAY--SEGLI 142
G W PV L G + G + + ++D ++A+ NR P GAY S GL+
Sbjct: 12 GGGWTPVCAYDDLIPGRGVAALVGGHQVAV--FRDRAGRLYAVGNRDPFSGAYVVSRGLL 69
Query: 143 NAKLTQDG--CIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVK 194
++ DG +V P FDLR+GA D P PA TL ++PV+
Sbjct: 70 GSR---DGVPVVVEPMYHRAFDLRSGACAD----EPETPGGGPA--TLPVWPVR 114
>gi|331700031|ref|YP_004336270.1| Rieske (2Fe-2S) domain-containing protein [Pseudonocardia
dioxanivorans CB1190]
gi|326954720|gb|AEA28417.1| Rieske (2Fe-2S) iron-sulfur domain protein [Pseudonocardia
dioxanivorans CB1190]
Length = 145
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 57/138 (41%), Gaps = 27/138 (19%)
Query: 94 VVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAE-GAYSEGLINAKLT----- 147
V + +P G R ++ DG I + E FA+ NR P + G EG++ ++
Sbjct: 6 VARVGDVPPGSRVLVTLDGREIGVFNVDGEFFAVRNRCPHQAGPLCEGILTRPVSSTRPG 65
Query: 148 ------QDGCIVCPTTESTFDLRTGAVRDWY-PNNPVLRAL------------TPALSTL 188
+ G + CP + FDL TG R W P+ +R+ P T
Sbjct: 66 EYAFTEEGGILRCPWHQWEFDLATG--RSWCDPDRVRVRSYPVVVERGGADVRVPGPYTA 123
Query: 189 YIFPVKTDEKNIYIRMEG 206
FPV +++ + + + G
Sbjct: 124 ETFPVAVEDEYVVVDLGG 141
>gi|282895586|ref|ZP_06303720.1| CAB/ELIP/HLIP-related protein [Raphidiopsis brookii D9]
gi|282899363|ref|ZP_06307331.1| CAB/ELIP/HLIP-related protein [Cylindrospermopsis raciborskii
CS-505]
gi|281195730|gb|EFA70659.1| CAB/ELIP/HLIP-related protein [Cylindrospermopsis raciborskii
CS-505]
gi|281199426|gb|EFA74290.1| CAB/ELIP/HLIP-related protein [Raphidiopsis brookii D9]
Length = 56
Score = 39.7 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN +E +NG+AA IGF+L++ E +T +G+L G
Sbjct: 17 FGFNEYAERLNGRAAMIGFILMVVIEYVTNQGVLAWLGL 55
>gi|104782186|ref|YP_608684.1| ferredoxin reductase component [Pseudomonas entomophila L48]
gi|95111173|emb|CAK15893.1| putative ferredoxin reductase component [Pseudomonas entomophila
L48]
Length = 513
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 24/123 (19%)
Query: 104 ERRVIIQDG-ETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLTQDGCIVCPTTESTF 161
+R + +Q G E ++L+ + D+V A + P GA EG+I A G +VCP ++ F
Sbjct: 15 QRPLRVQAGTEEVILVRHGDQVRAYQGNCPHAGAPLDEGVICA-----GLLVCPWHKAAF 69
Query: 162 DLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI------RMEGGASSDASAE 215
+ GAV + PAL L +PV+ + +++ R E SDA
Sbjct: 70 AMDEGAVCE-----------PPALVDLRRYPVQVKDGQVWVDDQPLPRAEPPLHSDARTF 118
Query: 216 IVF 218
+V
Sbjct: 119 VVI 121
>gi|91790113|ref|YP_551065.1| Rieske (2Fe-2S) domain-containing protein [Polaromonas sp. JS666]
gi|91699338|gb|ABE46167.1| Rieske (2Fe-2S) region [Polaromonas sp. JS666]
Length = 106
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 49/115 (42%), Gaps = 17/115 (14%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W V P P G R + DG I + K +AIE+ E +E L + ++ D
Sbjct: 3 DWTDVAPADGFPPGSCRTVDVDGVPIAVFNVKGRYYAIEDLCTHE---AETLSDGEVLDD 59
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALT-PALSTLYIFPVKTDEKNIYIR 203
IVCP + F L TG AL+ PA + FPV+ + + ++
Sbjct: 60 -IIVCPRHGAQFSLVTG------------EALSPPAYEAVPTFPVRVENGMVQVK 101
>gi|251772007|gb|EES52579.1| putative rieske iron-sulfur family protein [Leptospirillum
ferrodiazotrophum]
Length = 100
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 104 ERRVIIQDGETILLLWYKDEVFAIENRSPAEGAY-SEGLINAKLTQDGCIVCPTTESTFD 162
E ++++ DG+ I L AIENR P G Y ++G++ + ++CP FD
Sbjct: 14 EGQLVLADGQEIALFRVNGHYRAIENRCPHRGGYLADGIVRGEQ-----VLCPLHGWGFD 68
Query: 163 LRTGA 167
L TGA
Sbjct: 69 LATGA 73
>gi|168058670|ref|XP_001781330.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667223|gb|EDQ53858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 283
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 18/130 (13%)
Query: 59 PTCGRKLTCKAAEVS-----VTEEESSASGGGGGGENWVPVVPLSALPKGERRVIIQDGE 113
P GR K A + E ES +S G WV V+ + LP G+ + II +
Sbjct: 115 PKQGRGYNSKKAAAEGIKKIMRERESDSSSDG-----WVQVLTEAELPDGKNKAIIYNNA 169
Query: 114 TILLLWYKDEVFAIE-NRSPAEGAYSEGLIN-AKLTQDG------CIVCPTTESTFDLRT 165
+L+ +E++AI+ N + + EG ++ A+ DG I CP + F L
Sbjct: 170 GYVLVKRDNELYAIQANCTSCKFPVIEGTVSVAEAASDGPSQGETQIECPLCHTKFSLED 229
Query: 166 GAVRDWYPNN 175
G V ++ P +
Sbjct: 230 GRVVEYCPKD 239
>gi|433639510|ref|YP_007285270.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Halovivax ruber XH-70]
gi|433291314|gb|AGB17137.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Halovivax ruber XH-70]
Length = 623
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 52/115 (45%), Gaps = 18/115 (15%)
Query: 89 ENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEG-AYSEGLINAKLT 147
+ +VPVV +AL R+++ +G I L ++ V A++NR P G S+G +
Sbjct: 11 DGFVPVVDAAALESEGRKLVTPEGTAIALFHHEGAVRAVDNRCPHMGFPLSDGTV----- 65
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
++G + C + F+L G D P + +PV+ + +++
Sbjct: 66 EEGILTCHWHHARFELSCGDTFD------------PWADDVQTYPVEIRDGTVHV 108
>gi|417548930|ref|ZP_12200010.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii Naval-18]
gi|417567178|ref|ZP_12218050.1| 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit
[Acinetobacter baumannii OIFC143]
gi|395552850|gb|EJG18858.1| 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit
[Acinetobacter baumannii OIFC143]
gi|400386898|gb|EJP49971.1| putative biphenyl dioxygenase system ferredoxin component
[Acinetobacter baumannii Naval-18]
Length = 108
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 19/121 (15%)
Query: 90 NWVPVVPLSALPKGERRVI---IQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAK 145
N + V + L +GE + + D + + + E FA+ ++ S + SEG
Sbjct: 2 NKIFVCQIDELDEGEALKVDCNVGDIAALAVFNFNGEFFAMNDKCSHGNASMSEGY---- 57
Query: 146 LTQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
L DG + CP S F L+TG + PA ++ FPV ++ +Y+ M
Sbjct: 58 LEDDGTVECPLHASRFCLKTGVPQ-----------CVPATDSIQTFPVVIEDGALYVEMV 106
Query: 206 G 206
G
Sbjct: 107 G 107
>gi|37521012|ref|NP_924389.1| CAB/ELIP/HLIP-related protein [Gloeobacter violaceus PCC 7421]
gi|35212008|dbj|BAC89384.1| CAB/ELIP/HLIP-related protein [Gloeobacter violaceus PCC 7421]
Length = 52
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 26/40 (65%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
FGFN +EL+NG+ A IGF L EL TGKG+L G +
Sbjct: 13 FGFNPYAELLNGRLAMIGFAAALVVELATGKGVLSFLGLI 52
>gi|425443924|ref|ZP_18823987.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
gi|389733007|emb|CCI03161.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
Length = 70
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 235 EVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 280
E +M VD GF +E +NG+ A IGF+ LL E+LTGKG++
Sbjct: 20 EPKMYVDSS-SSLGFTKKAEKLNGRLAMIGFVSLLAIEVLTGKGII 64
>gi|383818883|ref|ZP_09974162.1| Rieske (2Fe-2S) protein [Mycobacterium phlei RIVM601174]
gi|383337679|gb|EID16054.1| Rieske (2Fe-2S) protein [Mycobacterium phlei RIVM601174]
Length = 111
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 53/123 (43%), Gaps = 17/123 (13%)
Query: 89 ENWVPVVPLSALPKGER-RVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLT 147
+ W+PV L L +GE V ++D +L E+ A + P G L++ ++T
Sbjct: 5 DTWIPVATLDDLWEGEVIEVAVEDRPILLAHLPGGEIRAYDGLCPHAGFP---LVDGEVT 61
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEGG 207
DG + CP FDL +GA + P+ TL V+ D I I + G
Sbjct: 62 -DGVLTCPAHSWEFDLESGA------------GVNPSTCTLNRHQVRLDGDRIAISLSQG 108
Query: 208 ASS 210
S+
Sbjct: 109 ESA 111
>gi|113954232|ref|YP_731278.1| Lhc-like protein Lhl4 [Synechococcus sp. CC9311]
gi|113881583|gb|ABI46541.1| Lhc-like protein Lhl4 [Synechococcus sp. CC9311]
Length = 48
Score = 39.3 bits (90), Expect = 1.9, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGF +E NG+ A +GF++ L ELLTG+G+L GF
Sbjct: 10 FGFVNFAETWNGRLAMLGFVIGLGTELLTGQGILNQIGF 48
>gi|355571817|ref|ZP_09043045.1| Rieske (2Fe-2S) iron-sulfur domain protein [Methanolinea tarda
NOBI-1]
gi|354825450|gb|EHF09680.1| Rieske (2Fe-2S) iron-sulfur domain protein [Methanolinea tarda
NOBI-1]
Length = 119
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 13/112 (11%)
Query: 97 LSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLTQDGCIVCP 155
LS + GE R + G+ ILL D V+A + P A SEG + + + CP
Sbjct: 10 LSGIRDGELRKVTVRGKEILLARRGDRVYATDVLCPHLRADLSEGTLEGHI-----LTCP 64
Query: 156 TTESTFDLRTGAVRDWYPNNPVL-----RALTPALSTLYIFPVKTDEKNIYI 202
S FD+R G V W + ++ RA+ P T Y PV+ + + +
Sbjct: 65 MHGSQFDIRDGHVVRWTNLSGIILKFATRAIPPRPLTCY--PVRIEGDRVLV 114
>gi|428224647|ref|YP_007108744.1| CAB/ELIP/HLIP family protein [Geitlerinema sp. PCC 7407]
gi|427984548|gb|AFY65692.1| CAB/ELIP/HLIP-related protein [Geitlerinema sp. PCC 7407]
Length = 56
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGF+ +E +NG+AA IGF+L L E ++G+GLL G
Sbjct: 17 FGFSEYAERLNGRAAMIGFVLTLIIEYVSGQGLLSWLGL 55
>gi|83718023|ref|YP_439699.1| naphthalene 1,2-dioxygenase [Burkholderia thailandensis E264]
gi|167578137|ref|ZP_02371011.1| naphthalene 1,2-dioxygenase system ferredoxin component
[Burkholderia thailandensis TXDOH]
gi|167616268|ref|ZP_02384903.1| naphthalene 1,2-dioxygenase system ferredoxin component
[Burkholderia thailandensis Bt4]
gi|257142838|ref|ZP_05591100.1| naphthalene 1,2-dioxygenase system ferredoxin component
[Burkholderia thailandensis E264]
gi|83651848|gb|ABC35912.1| naphthalene 1,2-dioxygenase system ferredoxin component
[Burkholderia thailandensis E264]
Length = 105
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 111 DGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTG 166
DG I + D+V+A+EN P ++ L+ DG + CP E+ FD++TG
Sbjct: 26 DGVEIGIYRVGDDVYALENVCP----HAYALLTQGFVDDGTVECPLHEAVFDIKTG 77
>gi|384917282|ref|ZP_10017410.1| Ferredoxin [Methylacidiphilum fumariolicum SolV]
gi|384525315|emb|CCG93283.1| Ferredoxin [Methylacidiphilum fumariolicum SolV]
Length = 102
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 98 SALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLTQDGCIVCPT 156
S +P+G + + +G+ I + YK +A+++ P EG SEG + ++G + CP
Sbjct: 11 SEIPEGGAKCVELEGKKIAIFCYKGAYYALDDTCPHEGGPLSEGFL-----EEGEVECPW 65
Query: 157 TESTFDLRTGAV 168
+ F L+TG V
Sbjct: 66 HGARFSLKTGEV 77
>gi|313125441|ref|YP_004035705.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Halogeometricum borinquense DSM 11551]
gi|312291806|gb|ADQ66266.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Halogeometricum borinquense DSM 11551]
Length = 587
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 18/118 (15%)
Query: 86 GGGENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINA 144
G + + VPL+ L + R DG + L ++ E+ ++NR P G SEG +
Sbjct: 7 GSIDRFRETVPLAELEREGRVQTSVDGRALALFHHEGEIRVVDNRCPHMGFPLSEGSV-- 64
Query: 145 KLTQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
+DG + C + F+L G D P + FPV+ + ++Y+
Sbjct: 65 ---EDGVLTCHWHHARFELSCGDTFD------------PWADDVQTFPVEIRDGSVYV 107
>gi|196233848|ref|ZP_03132686.1| Rieske (2Fe-2S) domain protein [Chthoniobacter flavus Ellin428]
gi|196222042|gb|EDY16574.1| Rieske (2Fe-2S) domain protein [Chthoniobacter flavus Ellin428]
Length = 102
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 99 ALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAE-GAYSEGLINAKLTQDGCIVCPTT 157
AL G R ++ D E + +FAI+NR P G SEG+I A G ++CP
Sbjct: 15 ALGHG-RCYLVGDEEIAVFRQRSGHLFAIQNRCPHRNGTLSEGVIGA-----GKVICPLH 68
Query: 158 ESTFDLRTGA 167
FDL +GA
Sbjct: 69 SHKFDLASGA 78
>gi|171057483|ref|YP_001789832.1| Rieske (2Fe-2S) domain-containing protein [Leptothrix cholodnii
SP-6]
gi|170774928|gb|ACB33067.1| Rieske (2Fe-2S) domain protein [Leptothrix cholodnii SP-6]
Length = 105
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 51/117 (43%), Gaps = 17/117 (14%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLTQ 148
NWV + LP + ++ G I + DEV+A +N + + +G +
Sbjct: 5 NWVDALSADDLPADDVIGVVVAGRDIAVYTVGDEVYATDNICTHGQARLCDGFLEGHE-- 62
Query: 149 DGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
I CP + FD+R G P +T AL + +PVK + + +Y++++
Sbjct: 63 ---IECPLHQGKFDVRDG--------KPTCAPVTDALRS---YPVKIEGQRVYLQLD 105
>gi|22299751|ref|NP_682998.1| CAB/ELIP/HLIP superfamily protein [Thermosynechococcus elongatus
BP-1]
gi|22295935|dbj|BAC09760.1| CAB/ELIP/HLIP superfamily protein [Thermosynechococcus elongatus
BP-1]
Length = 69
Score = 39.3 bits (90), Expect = 2.1, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 248 GFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFLD 287
GF +EL NG+ A IGF+ LL E++TG GL+ GFL+
Sbjct: 31 GFTPYAELFNGRLAMIGFISLLALEVITGHGLI---GFLN 67
>gi|403523802|ref|YP_006659371.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia pseudomallei BPC006]
gi|403078869|gb|AFR20448.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia pseudomallei BPC006]
Length = 115
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 49/117 (41%), Gaps = 17/117 (14%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLTQD 149
W + L + E + + I + D+VFA+ + + SEG + ++
Sbjct: 15 WHTLGALDEFSEDEPAARVVGNKPIAVFRVGDDVFALHDLCTHGHARLSEGFV-----EN 69
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEG 206
GC+ CP + FDLRTGA + P + +P++ + + I ++G
Sbjct: 70 GCVECPLHQGLFDLRTGAPK-----------CAPVTQPVRAYPIRIVDGQVEIHVDG 115
>gi|1256706|dbj|BAA07077.1| ferredoxin component of cumene dioxygenase [Pseudomonas
fluorescens]
gi|4105712|gb|AAD12766.1| ferredoxin [Pseudomonas fluorescens]
Length = 109
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 26/120 (21%)
Query: 94 VVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR------SPAEGAYSEGLINAKLT 147
V +S +P G+ + GE + + E+FA ++R S +EG Y EG I
Sbjct: 6 VCEVSDVPVGDALQVESKGEAVAIFNVDGELFATQDRCTHGDWSLSEGGYLEGDI----- 60
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEGG 207
+ C F +RTG V+ P P L I+P++ D ++++ + G
Sbjct: 61 ----VECSLHMGRFCVRTGKVKAAPPCEP-----------LKIYPIRIDGSDVFVDFDAG 105
>gi|354566757|ref|ZP_08985928.1| Ferrochelatase [Fischerella sp. JSC-11]
gi|353544416|gb|EHC13870.1| Ferrochelatase [Fischerella sp. JSC-11]
Length = 387
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 212 ASAEIVFSGKAQPGVTATDVNI--EEVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLL 269
A A++V P V + V ++V++ E E +G ++E+ NG+ A +GF+ L+
Sbjct: 313 ALADLVIDALKTPSVKLSQVYQMKKKVKIYPPEAWE-WGITTSAEVWNGRIAMLGFIALM 371
Query: 270 DFELLTGKGLLKGTGFL 286
EL+TG+GLL G L
Sbjct: 372 -IELITGRGLLHMIGIL 387
>gi|254438525|ref|ZP_05052019.1| nitrite reductase (NAD(P)H), small subunit [Octadecabacter
antarcticus 307]
gi|198253971|gb|EDY78285.1| nitrite reductase (NAD(P)H), small subunit [Octadecabacter
antarcticus 307]
Length = 111
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 90 NWVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENRSPAE-GAYSEGLINAKLT 147
+W+ + PL +P +G R + G + +DEVFA++N P + G +EG+++ K
Sbjct: 3 DWIDIAPLENVPQRGARMIKTAFGCVAVFRTAEDEVFALDNACPHKAGPLAEGIVHGK-- 60
Query: 148 QDGCIVCPTTESTFDLRTG 166
+ CP L TG
Sbjct: 61 ---SVTCPLHNWVISLETG 76
>gi|295697085|ref|YP_003590323.1| nitrogen-fixing NifU domain-containing protein [Kyrpidia tusciae
DSM 2912]
gi|295412687|gb|ADG07179.1| nitrogen-fixing NifU domain protein [Kyrpidia tusciae DSM 2912]
Length = 277
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 24/139 (17%)
Query: 72 VSVTEEESSA------SGGGGGGENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVF 125
V V E+E+ A G G W+ P+ L G Q G +LL+ ++
Sbjct: 154 VEVAEDETVAGFIPLDDVDGLGNSGWLEGPPVELLADGRPFRFEQGGHNVLLIRVGPKIM 213
Query: 126 AIENRSPAEGA-YSEGLINAKLTQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPA 184
A N+ P G +GL+ ++ + CP +DL TG LT
Sbjct: 214 AYRNQCPHMGMPLDKGLVEGEV-----LTCPWHGFRYDLSTG------------ECLTAP 256
Query: 185 LSTLYIFPVKTDEKNIYIR 203
L FPV+ +E+ +++R
Sbjct: 257 HVQLEPFPVRVEEQRVWVR 275
>gi|350561303|ref|ZP_08930142.1| Rieske (2Fe-2S) iron-sulfur domain protein [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349781410|gb|EGZ35718.1| Rieske (2Fe-2S) iron-sulfur domain protein [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 106
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 17/115 (14%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+WV V P + G+ +++ D I + +AIE+ ++ E I +D
Sbjct: 3 DWVDVAPAGEIEPGKHKLVNVDDVPIAVFNIDGRYYAIEDLC----SHEEYPIAEGEVKD 58
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALT-PALSTLYIFPVKTDEKNIYIR 203
I CP + F LRTGA ALT PA L FPV+ E + +R
Sbjct: 59 DRITCPQHGAEFCLRTGA------------ALTAPAYEPLTTFPVRIHEGVVQVR 101
>gi|434389510|ref|YP_007100121.1| NAD(FAD)-dependent dehydrogenase [Chamaesiphon minutus PCC 6605]
gi|428020500|gb|AFY96594.1| NAD(FAD)-dependent dehydrogenase [Chamaesiphon minutus PCC 6605]
Length = 529
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 25/121 (20%)
Query: 94 VVPLSALPKGERRVIIQDGETILLLWYKDEVFAI-----ENRSPAEGAYSEGLINAKLTQ 148
V + L G++ + ILL+ D ++AI N++P E G
Sbjct: 8 VAQFNELQDGQKLQVTVGDTDILLIRRADRIYAIGAYCTHNKAPLEQGVLHG-------- 59
Query: 149 DGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEGGA 208
CIVCP + FD+ TG + + P P L +L +PV+ D +I + + +
Sbjct: 60 -DCIVCPWHNAYFDITTGDL-----HQP------PGLDSLQRYPVRIDGDSIIVTVPDSS 107
Query: 209 S 209
S
Sbjct: 108 S 108
>gi|116072420|ref|ZP_01469687.1| possible high light inducible protein [Synechococcus sp. BL107]
gi|116064942|gb|EAU70701.1| possible high light inducible protein [Synechococcus sp. BL107]
Length = 47
Score = 39.3 bits (90), Expect = 2.2, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGF+ +E NG+ A +GF++ L ELLTG+G++ GF
Sbjct: 9 FGFSNFAETWNGRLAMLGFVIGLGTELLTGQGIISQIGF 47
>gi|170076817|ref|YP_001733455.1| high light inducible protein [Synechococcus sp. PCC 7002]
gi|169884486|gb|ACA98199.1| CAB/ELIP/HLIP superfamily [Synechococcus sp. PCC 7002]
Length = 45
Score = 39.3 bits (90), Expect = 2.2, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 243 DLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
D + FGF ++E +NG+ A IGF+ + E+ TG+G+L G L
Sbjct: 2 DDKKFGFTASAENLNGRMAMIGFIAAIILEVATGQGVLHFFGLL 45
>gi|434391586|ref|YP_007126533.1| high light inducible protein [Gloeocapsa sp. PCC 7428]
gi|428263427|gb|AFZ29373.1| high light inducible protein [Gloeocapsa sp. PCC 7428]
Length = 70
Score = 39.3 bits (90), Expect = 2.2, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 235 EVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 280
E +M V E GF +EL+NG+ A IGF+ LL E++TG+GL+
Sbjct: 20 EPKMYVQESQTGF--TPHAELLNGRLAMIGFVSLLVLEVVTGQGLI 63
>gi|403168104|ref|XP_003327800.2| hypothetical protein PGTG_08567 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167351|gb|EFP83381.2| hypothetical protein PGTG_08567 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 613
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 83/205 (40%), Gaps = 48/205 (23%)
Query: 8 FPQN------YTFARPQAGSISRRKPPPTRQPLPSSPSSRCCGHALSLNYPFSPREIPTC 61
+P+N Y F RP + +PPPTRQ L S + + + PFS IPT
Sbjct: 2 YPKNWKNIASYHF-RPPTVRLKVVQPPPTRQVLLKS-----TFYLKTSSSPFS-TAIPTL 54
Query: 62 GRKLTCKAAEVSVTEEESSASGGGGGGENWVPVVPLSALPKGERRVIIQDGETILLLWYK 121
+ +A VS ++ + +PL PK ++ IL+
Sbjct: 55 APNMRLEAGNVSEWQD------------GMMKEIPLD--PKADK------SPKILVTKVM 94
Query: 122 DEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFDL-RTGAVRDWYPNNPVLRA 180
++ A ++ GA LIN L DGC+ CP + F + + G + D
Sbjct: 95 GKIHATSSQCTHYGA---SLINGVLASDGCLTCPWHGAKFSVNKDGDIED---------- 141
Query: 181 LTPALSTLYIFPVKTDEKNIYIRME 205
P L+ L F V +++ +++ ++
Sbjct: 142 -APGLNALQSFTVLIEDERVFVEVD 165
>gi|298492119|ref|YP_003722296.1| CAB/ELIP/HLIP-like protein ['Nostoc azollae' 0708]
gi|298234037|gb|ADI65173.1| CAB/ELIP/HLIP-related protein ['Nostoc azollae' 0708]
Length = 56
Score = 39.3 bits (90), Expect = 2.3, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN +E +NG+AA IGF+L++ E T +G+L G
Sbjct: 17 FGFNEYAERLNGRAAMIGFILMVVIEYATNQGVLAWLGL 55
>gi|339505428|ref|YP_004692848.1| assimilatory nitrite reductase (NAD(P)H), small subunit NasE
[Roseobacter litoralis Och 149]
gi|338759421|gb|AEI95885.1| assimilatory nitrite reductase (NAD(P)H), small subunit NasE
[Roseobacter litoralis Och 149]
Length = 111
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 90 NWVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENRSPAE-GAYSEGLINAKLT 147
+W+ + PL +P +G R V G + +DE+FA++N P + G +EG+++ K
Sbjct: 3 DWIDIAPLENVPMRGARMVKTAFGCVAVFRTAEDEIFALDNACPHKAGPLAEGIVHGK-- 60
Query: 148 QDGCIVCPTTESTFDLRTG 166
+ CP L TG
Sbjct: 61 ---SVTCPLHNWVISLETG 76
>gi|448286962|ref|ZP_21478178.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Halogeometricum borinquense DSM 11551]
gi|445572708|gb|ELY27238.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Halogeometricum borinquense DSM 11551]
Length = 582
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 18/118 (15%)
Query: 86 GGGENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINA 144
G + + VPL+ L + R DG + L ++ E+ ++NR P G SEG +
Sbjct: 2 GSIDRFRETVPLAELEREGRVQTSVDGRALALFHHEGEIRVVDNRCPHMGFPLSEGSV-- 59
Query: 145 KLTQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
+DG + C + F+L G D P + FPV+ + ++Y+
Sbjct: 60 ---EDGVLTCHWHHARFELSCGDTFD------------PWADDVQTFPVEIRDGSVYV 102
>gi|443310140|ref|ZP_21039804.1| ferrochelatase [Synechocystis sp. PCC 7509]
gi|442779818|gb|ELR90047.1| ferrochelatase [Synechocystis sp. PCC 7509]
Length = 388
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFLD 287
+G T+E+ NG+ A +GF+ L+ EL+TG+GLL G L+
Sbjct: 349 WGMTTTAEVWNGRIAMLGFIALV-LELITGRGLLHFVGILN 388
>gi|390567101|ref|ZP_10247450.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia terrae
BS001]
gi|389940949|gb|EIN02729.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia terrae
BS001]
Length = 552
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 24/141 (17%)
Query: 64 KLTCKAAEVSVTEEESSASGGGGGGENWVPVVPLSALPKGERRVIIQDGETILLLWYKDE 123
++ C A VS + ++ + + V LS L + + +G ILL+ + D
Sbjct: 15 RIACAARPVSTRKTMATNTNA-----DMQKVALLSDLADNGMKRVEVNGTPILLIRHGDA 69
Query: 124 VFAIENRSPAEGAYSE--GLINAKLTQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRAL 181
V A P GA E L N +L +CP + TFD+ TGA+ +
Sbjct: 70 VHAYSADCPHAGAPLEQGALCNGRL------ICPWHKGTFDIATGALVE----------- 112
Query: 182 TPALSTLYIFPVKTDEKNIYI 202
PAL L +PV+ ++ ++ +
Sbjct: 113 PPALLPLTRYPVRIEQDDVLV 133
>gi|53716510|ref|YP_105032.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
mallei ATCC 23344]
gi|53722907|ref|YP_111892.1| aromatic hydrocarbons catabolism-related dioxygenase [Burkholderia
pseudomallei K96243]
gi|67641755|ref|ZP_00440523.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia mallei GB8 horse 4]
gi|76818962|ref|YP_336139.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 1710b]
gi|121597450|ref|YP_990976.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia mallei SAVP1]
gi|124382542|ref|YP_001025377.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia mallei NCTC 10229]
gi|126444701|ref|YP_001063697.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia pseudomallei 668]
gi|126446002|ref|YP_001077441.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia mallei NCTC 10247]
gi|126456584|ref|YP_001076591.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia pseudomallei 1106a]
gi|134278409|ref|ZP_01765123.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia pseudomallei 305]
gi|167000696|ref|ZP_02266505.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia mallei PRL-20]
gi|167743737|ref|ZP_02416511.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia pseudomallei 14]
gi|167820928|ref|ZP_02452608.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia pseudomallei 91]
gi|167829283|ref|ZP_02460754.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia pseudomallei 9]
gi|167850756|ref|ZP_02476264.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia pseudomallei B7210]
gi|167907691|ref|ZP_02494896.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia pseudomallei NCTC 13177]
gi|167916033|ref|ZP_02503124.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia pseudomallei 112]
gi|217422314|ref|ZP_03453817.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia pseudomallei 576]
gi|226195584|ref|ZP_03791171.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia pseudomallei Pakistan 9]
gi|237507689|ref|ZP_04520404.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia pseudomallei MSHR346]
gi|242311336|ref|ZP_04810353.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia pseudomallei 1106b]
gi|254177199|ref|ZP_04883855.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia mallei ATCC 10399]
gi|254184776|ref|ZP_04891365.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia pseudomallei 1655]
gi|254185995|ref|ZP_04892513.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia pseudomallei Pasteur 52237]
gi|254194110|ref|ZP_04900542.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia pseudomallei S13]
gi|254202964|ref|ZP_04909326.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia mallei FMH]
gi|254208298|ref|ZP_04914647.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia mallei JHU]
gi|254264627|ref|ZP_04955492.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia pseudomallei 1710a]
gi|254301051|ref|ZP_04968495.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia pseudomallei 406e]
gi|386865702|ref|YP_006278650.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 1026b]
gi|418397167|ref|ZP_12970903.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 354a]
gi|418536928|ref|ZP_13102594.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 1026a]
gi|418556748|ref|ZP_13121369.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 354e]
gi|52213321|emb|CAH39364.1| putative aromatic hydrocarbons catabolism-related dioxygenase
[Burkholderia pseudomallei K96243]
gi|52422480|gb|AAU46050.1| iron-sulfur cluster-binding protein, rieske family [Burkholderia
mallei ATCC 23344]
gi|76583435|gb|ABA52909.1| iron-sulfur cluster-binding protein, rieske family [Burkholderia
pseudomallei 1710b]
gi|121225248|gb|ABM48779.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia mallei SAVP1]
gi|126224192|gb|ABN87697.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia pseudomallei 668]
gi|126230352|gb|ABN93765.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia pseudomallei 1106a]
gi|126238856|gb|ABO01968.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia mallei NCTC 10247]
gi|134250193|gb|EBA50273.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia pseudomallei 305]
gi|147746009|gb|EDK53087.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia mallei FMH]
gi|147750985|gb|EDK58053.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia mallei JHU]
gi|157811074|gb|EDO88244.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia pseudomallei 406e]
gi|157933681|gb|EDO89351.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia pseudomallei Pasteur 52237]
gi|160698239|gb|EDP88209.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia mallei ATCC 10399]
gi|169650861|gb|EDS83554.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia pseudomallei S13]
gi|184215368|gb|EDU12349.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia pseudomallei 1655]
gi|217394545|gb|EEC34564.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia pseudomallei 576]
gi|225932069|gb|EEH28069.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia pseudomallei Pakistan 9]
gi|234999894|gb|EEP49318.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia pseudomallei MSHR346]
gi|238522730|gb|EEP86173.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia mallei GB8 horse 4]
gi|242134575|gb|EES20978.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia pseudomallei 1106b]
gi|243063380|gb|EES45566.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia mallei PRL-20]
gi|254215629|gb|EET05014.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia pseudomallei 1710a]
gi|261826856|gb|ABM99562.2| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia mallei NCTC 10229]
gi|385351300|gb|EIF57779.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 1026a]
gi|385366576|gb|EIF72187.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 354e]
gi|385369291|gb|EIF74633.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 354a]
gi|385662830|gb|AFI70252.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 1026b]
Length = 109
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 49/117 (41%), Gaps = 17/117 (14%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLTQD 149
W + L + E + + I + D+VFA+ + + SEG + ++
Sbjct: 9 WHTLGALDEFSEDEPAARVVGNKPIAVFRVGDDVFALHDLCTHGHARLSEGFV-----EN 63
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEG 206
GC+ CP + FDLRTGA + P + +P++ + + I ++G
Sbjct: 64 GCVECPLHQGLFDLRTGAPK-----------CAPVTQPVRAYPIRIVDGQVEIHVDG 109
>gi|428202893|ref|YP_007081482.1| Chlorophyll A-B binding protein [Pleurocapsa sp. PCC 7327]
gi|427980325|gb|AFY77925.1| Chlorophyll A-B binding protein [Pleurocapsa sp. PCC 7327]
Length = 70
Score = 39.3 bits (90), Expect = 2.4, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 235 EVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 280
E M VDE + GF +E +NG+ A IGF+ LL E+LTG+GL+
Sbjct: 20 EPTMYVDETPKT-GFTQHAEQLNGRLAMIGFISLLALEVLTGQGLI 64
>gi|83716182|ref|YP_438690.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
thailandensis E264]
gi|257141760|ref|ZP_05590022.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
thailandensis E264]
gi|83650007|gb|ABC34071.1| iron-sulfur cluster-binding protein, rieske family [Burkholderia
thailandensis E264]
Length = 109
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLTQD 149
W P+ L + + I + + + D+VFA+ + + SEG + +D
Sbjct: 9 WHPLGTLDEFTEDDPAARIVGNKPVAVFRVGDDVFALHDLCTHGHARLSEGFV-----ED 63
Query: 150 GCIVCPTTESTFDLRTGA 167
GC+ CP + FD+RTGA
Sbjct: 64 GCVECPLHQGLFDIRTGA 81
>gi|307104165|gb|EFN52420.1| hypothetical protein CHLNCDRAFT_138918 [Chlorella variabilis]
Length = 148
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 105 RRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEG---LINAKLTQDGCIVCPTTESTF 161
++V+ G+ ILL +E+ A+ N+ G G + A++ +GC+ CP + F
Sbjct: 42 KKVVEIGGQRILLAAVGEEIKAVSNKCSHLGLPLVGKTPVFQAEVA-NGCVTCPAHGTKF 100
Query: 162 DLRTGA-VRDWYPNNPVL 178
DL TG V +W P P L
Sbjct: 101 DLTTGQPVGEWCPKMPNL 118
>gi|148241619|ref|YP_001226776.1| high light inducible protein [Synechococcus sp. RCC307]
gi|147849929|emb|CAK27423.1| High light inducible protein [Synechococcus sp. RCC307]
Length = 77
Score = 39.3 bits (90), Expect = 2.4, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 246 GFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
G+GF+ +E +NG+ A +GF+ L ELLTG+GLL G
Sbjct: 38 GWGFHERAEKLNGRLAMVGFVAALATELLTGEGLLHTIGL 77
>gi|51243154|gb|AAT99369.1| putative ferredoxin [Sphingomonas sp. tfd44]
Length = 108
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLTQ 148
+W+ + P+ + +GE + +G + + + FA+ + + + SEG + +
Sbjct: 2 SWIDIGPVGIVDEGEVAGVNANGTPLAIFCKEGRFFALHDLCTHGQARLSEGFV-----E 56
Query: 149 DGCIVCPTTESTFDLRTG 166
DGCI CP + FD+ TG
Sbjct: 57 DGCIECPLHQGLFDIETG 74
>gi|380022979|ref|XP_003695310.1| PREDICTED: apoptosis-inducing factor 3-like [Apis florea]
Length = 586
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 17/121 (14%)
Query: 110 QDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTGAVR 169
Q+G ILL+ K ++ AI + GA L++ DG I CP + F+++TG +
Sbjct: 63 QNGGKILLIKQKGQIHAIGTKCTHYGA----LLHTGALGDGRIRCPWHGACFNIKTGDIE 118
Query: 170 DWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEGGASS-DASAEIVFSGKAQPGVTA 228
D+ P L +L F V D Y+R++ + S I + + P T
Sbjct: 119 DY-----------PGLDSLPCFQVNVDTSG-YVRVKANRKDLEFSRRIKYMCERDPNNTN 166
Query: 229 T 229
T
Sbjct: 167 T 167
>gi|167724794|ref|ZP_02408030.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia pseudomallei DM98]
Length = 109
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 49/117 (41%), Gaps = 17/117 (14%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLTQD 149
W + L + E + + I + D+VFA+ + + SEG + ++
Sbjct: 9 WHTLGALDEFSEDEPAARVVGNKPIAVFRVGDDVFALHDLCTHGHARLSEGFV-----EN 63
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEG 206
GC+ CP + FDLRTGA + P + +P++ + + I ++G
Sbjct: 64 GCVECPLHQGLFDLRTGAPK-----------CAPVTQPVRAYPIRIVDGQVEIHVDG 109
>gi|113954543|ref|YP_731552.1| high light inducible protein [Synechococcus sp. CC9311]
gi|352095935|ref|ZP_08956882.1| Chlorophyll A-B binding protein [Synechococcus sp. WH 8016]
gi|113881894|gb|ABI46852.1| possible high light inducible protein [Synechococcus sp. CC9311]
gi|351677291|gb|EHA60440.1| Chlorophyll A-B binding protein [Synechococcus sp. WH 8016]
Length = 50
Score = 38.9 bits (89), Expect = 2.5, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 235 EVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 280
E ++ L FGF+ +E +NG+AA +GF+ LL E G GLL
Sbjct: 3 EPSLIPKRKLPRFGFHTHTEKLNGRAAMLGFIALLVVEFKIGHGLL 48
>gi|456358315|dbj|BAM92760.1| conserved hypothetical protein [Agromonas oligotrophica S58]
Length = 506
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 17/94 (18%)
Query: 111 DGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTGAVR 169
D E +LL+ ++FAI+ S G ++GL+ + CP + FDLRTG R
Sbjct: 32 DKEAVLLVHTGSDIFAIDAFCSHYHGPLADGLVVGD-----SVRCPWHHACFDLRTGEAR 86
Query: 170 DWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIR 203
RA PALS L ++ V+ + I +R
Sbjct: 87 ---------RA--PALSPLSVWQVEQEAGRIMVR 109
>gi|167899358|ref|ZP_02486759.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia pseudomallei 7894]
gi|167923874|ref|ZP_02510965.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia pseudomallei BCC215]
gi|418544237|ref|ZP_13109546.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 1258a]
gi|418551078|ref|ZP_13116022.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 1258b]
gi|385349874|gb|EIF56432.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 1258b]
gi|385350426|gb|EIF56964.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 1258a]
Length = 109
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 49/117 (41%), Gaps = 17/117 (14%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLTQD 149
W + L + E + + I + D+VFA+ + + SEG + ++
Sbjct: 9 WHTLGALDEFSEDEPAARVVGNKPIAVFRVGDDVFALHDLCTHGHARLSEGFV-----EN 63
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEG 206
GC+ CP + FDLRTGA + P + +P++ + + I ++G
Sbjct: 64 GCVECPLHQGLFDLRTGAPK-----------CAPVTQPVRAYPIRILDGQVEIHVDG 109
>gi|107026010|ref|YP_623521.1| Rieske (2Fe-2S) protein [Burkholderia cenocepacia AU 1054]
gi|116692805|ref|YP_838338.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia cenocepacia
HI2424]
gi|170737944|ref|YP_001779204.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia cenocepacia
MC0-3]
gi|254248106|ref|ZP_04941426.1| Rieske [Burkholderia cenocepacia PC184]
gi|105895384|gb|ABF78548.1| Rieske (2Fe-2S) region [Burkholderia cenocepacia AU 1054]
gi|116650805|gb|ABK11445.1| Rieske (2Fe-2S) domain protein [Burkholderia cenocepacia HI2424]
gi|124874607|gb|EAY64597.1| Rieske [Burkholderia cenocepacia PC184]
gi|169820132|gb|ACA94714.1| Rieske (2Fe-2S) domain protein [Burkholderia cenocepacia MC0-3]
Length = 105
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 111 DGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTGA 167
DG I + D+V+A+EN P ++ L+ +G + CP E+ FD++TGA
Sbjct: 26 DGVEIGIYRVGDDVYALENVCP----HAYALLTQGFVDEGTVECPLHEAVFDIKTGA 78
>gi|427419231|ref|ZP_18909414.1| thiamine pyrophosphate-dependent enzyme, putative carboligase or
decarboxylase [Leptolyngbya sp. PCC 7375]
gi|425761944|gb|EKV02797.1| thiamine pyrophosphate-dependent enzyme, putative carboligase or
decarboxylase [Leptolyngbya sp. PCC 7375]
Length = 650
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLTQ 148
W V+ L LP+G + ++ +++ L Y+ + A++NR P +G EG I +
Sbjct: 7 QWYRVLDLDELPEGRVKTVVAGHKSLALTHYQGQYGALDNRCPHQGGPLGEGSI-----E 61
Query: 149 DGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
+G + CP + TGA P + AL T FPV +Y+ +E
Sbjct: 62 NGLLRCPWHGWDYCPLTGA-------PPGALEVDDALDT---FPVDVRSDGVYVGLE 108
>gi|335043919|ref|ZP_08536944.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Methylophaga aminisulfidivorans MP]
gi|333787165|gb|EGL53049.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Methylophaga aminisulfidivorans MP]
Length = 101
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 48/116 (41%), Gaps = 17/116 (14%)
Query: 90 NWVPVVPLSALPK-GERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQ 148
+W V PL +PK G R ++ +G+ + D+VFA+ ++ P + +G ++ L
Sbjct: 2 SWTEVGPLVDIPKKGSRVLVTAEGDVAVFRTSSDQVFALFDQCP----HKKGPLSQGLVY 57
Query: 149 DGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
D + CP D+ +G A P F K D ++I +
Sbjct: 58 DNRVACPLHNWVIDMNSG------------EATGPDEGCTRTFETKIDNGTVFISL 101
>gi|434396857|ref|YP_007130861.1| CAB/ELIP/HLIP superfamily protein [Stanieria cyanosphaera PCC 7437]
gi|428267954|gb|AFZ33895.1| CAB/ELIP/HLIP superfamily protein [Stanieria cyanosphaera PCC 7437]
Length = 47
Score = 38.9 bits (89), Expect = 2.6, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
FGF +E NG+ A +GF++ + EL+TGKG+L G +
Sbjct: 8 FGFTSFAENWNGRLAMLGFIITIATELMTGKGILAQLGLM 47
>gi|300312956|ref|YP_003777048.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
[Herbaspirillum seropedicae SmR1]
gi|300075741|gb|ADJ65140.1| CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase
protein [Herbaspirillum seropedicae SmR1]
Length = 360
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 12/84 (14%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLT-- 147
W V +GE G+ + + +E+FA+++ + G NAKL+
Sbjct: 3 EWFDVGHADDFAEGEVAAARAGGQAVAVFRLGEEIFALKDLC------THG--NAKLSDG 54
Query: 148 --QDGCIVCPTTESTFDLRTGAVR 169
+DGC+ CP + FD+R+GA R
Sbjct: 55 YVEDGCVECPLHQGLFDIRSGAPR 78
>gi|288919921|ref|ZP_06414243.1| Rieske (2Fe-2S) domain protein [Frankia sp. EUN1f]
gi|288348665|gb|EFC82920.1| Rieske (2Fe-2S) domain protein [Frankia sp. EUN1f]
Length = 456
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 86 GGGENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINA 144
G E W P ALP+G + GE ILL+ +++A+E+R G +SE +
Sbjct: 67 GLREYWYPAALSDALPEGGTHAVKMLGEEILLVRKNGKLYAVEDRCAHRGTRFSERPL-- 124
Query: 145 KLTQDGCIVCPTTESTFDLRTGAVR 169
L++D I C TFD+ G +R
Sbjct: 125 VLSED-TITCWYHTWTFDMENGDLR 148
>gi|254254242|ref|ZP_04947559.1| Rieske (2Fe-2S) protein [Burkholderia dolosa AUO158]
gi|124898887|gb|EAY70730.1| Rieske (2Fe-2S) protein [Burkholderia dolosa AUO158]
Length = 105
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 111 DGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTG 166
DG I + D+V+A+EN P ++ L+ +G + CP E+ FD+RTG
Sbjct: 26 DGVEIGIYRVGDDVYALENVCP----HAYALLTQGFVDEGTVECPLHEAVFDIRTG 77
>gi|110633805|ref|YP_674013.1| nitrite reductase (NAD(P)H) small subunit [Chelativorans sp. BNC1]
gi|110284789|gb|ABG62848.1| assimilatory nitrite reductase (NAD(P)H) small subunit
[Chelativorans sp. BNC1]
Length = 112
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Query: 90 NWVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQ 148
NW + L +P +G R V + + + + +FA+E++ P G G ++ +
Sbjct: 5 NWFAIGKLEDIPLRGARCVETGNTKIAVFRTADNRIFALEDKCPHRG----GPLSQGIVH 60
Query: 149 DGCIVCPTTESTFDLRTG 166
DGC+ CP L TG
Sbjct: 61 DGCVTCPLHNWVISLETG 78
>gi|269126460|ref|YP_003299830.1| Rieske (2Fe-2S) domain-containing protein [Thermomonospora curvata
DSM 43183]
gi|268311418|gb|ACY97792.1| Rieske (2Fe-2S) domain protein [Thermomonospora curvata DSM 43183]
Length = 114
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 17/120 (14%)
Query: 86 GGGENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINA 144
G + +V V L +P+ + D + L+ EVFA+ + S AE A SEG +
Sbjct: 3 GEQDGFVKVCALEDIPEDGALAVEIDDTPVALVRTGGEVFALHDVCSHAEVALSEGEV-- 60
Query: 145 KLTQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
DG I C S FDLRTG P NP PA + + + V+ + +++ +
Sbjct: 61 ---YDGAIECWLHGSCFDLRTGK-----PTNP------PASAPVPTYRVRVSDGQVHVSL 106
>gi|428298688|ref|YP_007136994.1| high light inducible protein [Calothrix sp. PCC 6303]
gi|428235232|gb|AFZ01022.1| high light inducible protein [Calothrix sp. PCC 6303]
Length = 72
Score = 38.9 bits (89), Expect = 2.7, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 235 EVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 280
E ++ VD + GF +E++NG+ A IGF+ L+ E+ TG G+
Sbjct: 21 EPKVYVDAQGDRTGFTTYAEMLNGRLAMIGFISLIALEVFTGHGIF 66
>gi|115358854|ref|YP_775992.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia ambifaria
AMMD]
gi|170698966|ref|ZP_02890025.1| Rieske (2Fe-2S) domain protein [Burkholderia ambifaria IOP40-10]
gi|172063591|ref|YP_001811242.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia ambifaria
MC40-6]
gi|115284142|gb|ABI89658.1| Rieske (2Fe-2S) domain protein [Burkholderia ambifaria AMMD]
gi|170136146|gb|EDT04415.1| Rieske (2Fe-2S) domain protein [Burkholderia ambifaria IOP40-10]
gi|171996108|gb|ACB67026.1| Rieske (2Fe-2S) domain protein [Burkholderia ambifaria MC40-6]
Length = 105
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 111 DGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTG 166
DG I + DEV+A+EN P ++ L+ +G + CP E+ FD++TG
Sbjct: 26 DGVEIGIYRVGDEVYALENVCP----HAYALLTQGFVDEGTVECPLHEAVFDIKTG 77
>gi|357385363|ref|YP_004900087.1| nitrite reductase (NAD(P)H) small subunit [Pelagibacterium
halotolerans B2]
gi|351594000|gb|AEQ52337.1| nitrite reductase (NAD(P)H) small subunit [Pelagibacterium
halotolerans B2]
Length = 111
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 90 NWVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
+W+ + LS +P +G R + G+ + DEV+AIE+R P +G S+G+++
Sbjct: 3 DWIKIGQLSDIPQRGARCLNTPIGKIAVFRTATDEVYAIEDRCPHKGGPLSQGIVHGAQ- 61
Query: 148 QDGCIVCPTTESTFDLRTG 166
+ CP F L TG
Sbjct: 62 ----VTCPLHNWVFSLETG 76
>gi|344341763|ref|ZP_08772679.1| nitrite reductase (NAD(P)H), small subunit [Thiocapsa marina 5811]
gi|343798366|gb|EGV16324.1| nitrite reductase (NAD(P)H), small subunit [Thiocapsa marina 5811]
Length = 111
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 91 WVPVVPLSALPKGERRVIIQD-GETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLTQ 148
W+ V L +P+ RV+ ++ G+ + DEVFA+ NR P G SEG++ +
Sbjct: 10 WLEVGTLDEIPRQGARVLKREQGDIAVFRTAADEVFALLNRCPHRGGPLSEGILYGRN-- 67
Query: 149 DGCIVCPTTESTFDLRTGAVR 169
IVCP DL +G +
Sbjct: 68 ---IVCPLHNWCLDLASGEAK 85
>gi|158340908|ref|YP_001522076.1| CAB/ELIP/HLIP superfamily protein, putative [Acaryochloris marina
MBIC11017]
gi|158311149|gb|ABW32762.1| CAB/ELIP/HLIP superfamily protein, putative [Acaryochloris marina
MBIC11017]
Length = 47
Score = 38.9 bits (89), Expect = 2.8, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
FGFN +E +G+ A +GF L + EL+TGKG+L G +
Sbjct: 8 FGFNPFAEAWSGRLAMVGFYLAIAIELVTGKGVLHFWGLM 47
>gi|113954925|ref|YP_731425.1| Lhc-like protein Lhl4 [Synechococcus sp. CC9311]
gi|113882276|gb|ABI47234.1| Lhc-like protein Lhl4 [Synechococcus sp. CC9311]
Length = 47
Score = 38.9 bits (89), Expect = 2.8, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 241 DEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
D+ FGF +E NG+ A IGF++ L ELLTG+G+L G
Sbjct: 3 DQTASRFGFVEFAETWNGRLAMIGFVIGLGTELLTGQGILSQIGL 47
>gi|430761123|ref|YP_007216980.1| 3-phenylpropionate dioxygenase ferredoxin subunit [Thioalkalivibrio
nitratireducens DSM 14787]
gi|430010747|gb|AGA33499.1| 3-phenylpropionate dioxygenase ferredoxin subunit [Thioalkalivibrio
nitratireducens DSM 14787]
Length = 106
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 17/115 (14%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+WV V P + G+ +++ D I + +AIE+ ++ E I +D
Sbjct: 3 DWVNVAPAGEIEPGKHQLVDVDDVPIAVFNIDGSYYAIEDLC----SHEEYPIAEGEVKD 58
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALT-PALSTLYIFPVKTDEKNIYIR 203
I CP + F LRTGA ALT PA L FPV+ E + +R
Sbjct: 59 NRITCPQHGAEFCLRTGA------------ALTAPAYEPLTTFPVRIHEGVVQVR 101
>gi|254412995|ref|ZP_05026767.1| hypothetical protein MC7420_2155 [Coleofasciculus chthonoplastes
PCC 7420]
gi|254413010|ref|ZP_05026782.1| hypothetical protein MC7420_2170 [Coleofasciculus chthonoplastes
PCC 7420]
gi|196180159|gb|EDX75151.1| hypothetical protein MC7420_2155 [Coleofasciculus chthonoplastes
PCC 7420]
gi|196180174|gb|EDX75166.1| hypothetical protein MC7420_2170 [Coleofasciculus chthonoplastes
PCC 7420]
Length = 47
Score = 38.9 bits (89), Expect = 2.9, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
FGF +E NG+ A +GF++ + ELLTG+G+L+ G +
Sbjct: 8 FGFTSFAETWNGRLAMLGFVIGIATELLTGQGILQQLGLM 47
>gi|171317563|ref|ZP_02906751.1| Rieske (2Fe-2S) domain protein [Burkholderia ambifaria MEX-5]
gi|171097257|gb|EDT42104.1| Rieske (2Fe-2S) domain protein [Burkholderia ambifaria MEX-5]
Length = 105
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 111 DGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTG 166
DG I + DEV+A+EN P ++ L+ +G + CP E+ FD++TG
Sbjct: 26 DGVEIGIYRVGDEVYALENVCP----HAYALLTQGFVDEGTVECPLHEAVFDIKTG 77
>gi|241204359|ref|YP_002975455.1| nitrite reductase (NAD(P)H) small subunit [Rhizobium leguminosarum
bv. trifolii WSM1325]
gi|240858249|gb|ACS55916.1| nitrite reductase (NAD(P)H), small subunit [Rhizobium leguminosarum
bv. trifolii WSM1325]
Length = 109
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 90 NWVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
W+ + +S +P +G R V G+ + ++EVFAIE+ P +G S+G+++AK
Sbjct: 2 KWIAIGDISDIPLRGARCVKTPQGKIAVFRTAENEVFAIEDHCPHKGGPLSQGIVHAK-- 59
Query: 148 QDGCIVCPTTESTFDLRTG 166
+ CP L TG
Sbjct: 60 ---SVTCPLHNWVISLETG 75
>gi|206562669|ref|YP_002233432.1| putative aromatic hydrocarbons catabolism dioxygenase [Burkholderia
cenocepacia J2315]
gi|444364899|ref|ZP_21165149.1| Rieske [2Fe-2S] domain protein [Burkholderia cenocepacia BC7]
gi|444368925|ref|ZP_21168711.1| Rieske [2Fe-2S] domain protein [Burkholderia cenocepacia
K56-2Valvano]
gi|198038709|emb|CAR54670.1| putative aromatic hydrocarbons catabolism-related dioxygenase
[Burkholderia cenocepacia J2315]
gi|443591968|gb|ELT60814.1| Rieske [2Fe-2S] domain protein [Burkholderia cenocepacia BC7]
gi|443599993|gb|ELT68229.1| Rieske [2Fe-2S] domain protein [Burkholderia cenocepacia
K56-2Valvano]
Length = 108
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLTQ 148
W P+ +GE + + I + DE+FA+ + + SEG + +
Sbjct: 8 QWHPLGAFDEFSEGEPAARVAGQKPIAVFRIGDELFAMHDLCTHGHARLSEGYV-----E 62
Query: 149 DGCIVCPTTESTFDLRTGA 167
DGC+ CP + D+RTGA
Sbjct: 63 DGCVECPLHQGLIDIRTGA 81
>gi|291300212|ref|YP_003511490.1| nitrite reductase (NAD(P)H) small subunit [Stackebrandtia
nassauensis DSM 44728]
gi|290569432|gb|ADD42397.1| nitrite reductase (NAD(P)H), small subunit [Stackebrandtia
nassauensis DSM 44728]
Length = 113
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 90 NWVPVVPLSAL-PKGERRVIIQDGETILLLWYKDE-VFAIENRSPAEGAY--SEGLINAK 145
+W P+ L L P+ R ++ DG + L +D+ +FA+EN P AY S G++ +
Sbjct: 2 SWEPICALEQLTPERGRAALLPDGTQVALFRTRDDDLFAVENLDPFSNAYVMSRGILGDR 61
Query: 146 LTQDGCIVCPTTESTFDLRTGAVRD 170
+ P + FDL TG +D
Sbjct: 62 -AGTPTVASPMYKQVFDLATGECKD 85
>gi|83942162|ref|ZP_00954624.1| hypothetical protein EE36_07998 [Sulfitobacter sp. EE-36]
gi|83847982|gb|EAP85857.1| hypothetical protein EE36_07998 [Sulfitobacter sp. EE-36]
Length = 111
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 90 NWVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENRSPAE-GAYSEGLINAKLT 147
+W+ + L +P +G R + G + +DEVFA++N P + G +EG+++ K
Sbjct: 3 SWIDIAALDDVPQRGARMIKTTLGCVAVFRTAEDEVFALDNACPHKAGPLAEGIVHGK-- 60
Query: 148 QDGCIVCPTTESTFDLRTG 166
+ CP F L TG
Sbjct: 61 ---SVTCPLHNWVFSLETG 76
>gi|378787392|gb|AFC40023.1| Ycf17 [Porphyra umbilicalis]
Length = 48
Score = 38.9 bits (89), Expect = 3.0, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFLD 287
+GF ++E NG+ A IGF+ ++ EL+T KGLL G +D
Sbjct: 8 WGFTDSAETWNGRLAMIGFITVVFIELVTSKGLLYLAGLMD 48
>gi|420246879|ref|ZP_14750306.1| NAD(P)H-nitrite reductase [Burkholderia sp. BT03]
gi|398073028|gb|EJL64214.1| NAD(P)H-nitrite reductase [Burkholderia sp. BT03]
Length = 524
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 20/102 (19%)
Query: 103 GERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSE--GLINAKLTQDGCIVCPTTEST 160
G +RV + +G ILL+ + D V A P GA E L N +L +CP + T
Sbjct: 22 GMKRVEV-NGTPILLIRHGDAVHAYSADCPHAGAPLEQGALCNGRL------ICPWHKGT 74
Query: 161 FDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
FD+ TGA+ + PAL L +PV+ ++ ++ +
Sbjct: 75 FDIATGALVE-----------PPALLPLTRYPVRIEQDDVLV 105
>gi|402568503|ref|YP_006617847.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia cepacia
GG4]
gi|402249700|gb|AFQ50153.1| Rieske (2Fe-2S) domain protein [Burkholderia cepacia GG4]
Length = 105
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 111 DGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTG 166
DG I + DEV+A+EN P ++ L+ +G + CP E+ FD++TG
Sbjct: 26 DGVEIGIYRVGDEVYALENVCP----HAYALLTQGFVDEGTVECPLHEAVFDIKTG 77
>gi|434407834|ref|YP_007150719.1| Chlorophyll A-B binding protein [Cylindrospermum stagnale PCC 7417]
gi|428262089|gb|AFZ28039.1| Chlorophyll A-B binding protein [Cylindrospermum stagnale PCC 7417]
Length = 56
Score = 38.9 bits (89), Expect = 3.1, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN +E +NG+AA IGF+L++ E T +G+L G
Sbjct: 17 FGFNEYAERLNGRAAMIGFILMVVIEYATNQGVLTWLGL 55
>gi|218439498|ref|YP_002377827.1| hypothetical protein PCC7424_2542 [Cyanothece sp. PCC 7424]
gi|218172226|gb|ACK70959.1| conserved hypothetical protein [Cyanothece sp. PCC 7424]
Length = 70
Score = 38.9 bits (89), Expect = 3.1, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 235 EVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLK 281
E ++ VD+ + GF +E +NG+ A IGF+ L+ FE+LTG GL++
Sbjct: 20 EPKVYVDQT-QRTGFTEYAEKLNGRLAMIGFVSLVAFEVLTGHGLVE 65
>gi|385204984|ref|ZP_10031854.1| NAD(P)H-nitrite reductase [Burkholderia sp. Ch1-1]
gi|385184875|gb|EIF34149.1| NAD(P)H-nitrite reductase [Burkholderia sp. Ch1-1]
Length = 521
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 45/110 (40%), Gaps = 17/110 (15%)
Query: 94 VVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLTQDGCI 152
V LS L ++ DGE ILL+ D V A P GA EG + G I
Sbjct: 8 VAQLSQLRSDRAERVVVDGEPILLVRDGDTVHAYSADCPHAGAPLEEGALC-----HGRI 62
Query: 153 VCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
+CP + TFD+ TG V + PAL L +P N+ +
Sbjct: 63 ICPWHKGTFDVSTGNVLE-----------PPALVALDRYPAVVAGDNVMV 101
>gi|83953217|ref|ZP_00961939.1| nitrite reductase small subunit [Sulfitobacter sp. NAS-14.1]
gi|83842185|gb|EAP81353.1| nitrite reductase small subunit [Sulfitobacter sp. NAS-14.1]
Length = 111
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 90 NWVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENRSPAE-GAYSEGLINAKLT 147
+W+ + L +P +G R + G + +DEVFA++N P + G +EG+++ K
Sbjct: 3 SWIDIAALDDVPQRGARMIKTTLGCVAVFRTAEDEVFALDNACPHKAGPLAEGIVHGK-- 60
Query: 148 QDGCIVCPTTESTFDLRTG 166
+ CP F L TG
Sbjct: 61 ---SVTCPLHNWVFSLETG 76
>gi|390569942|ref|ZP_10250215.1| naphthalene 1,2-dioxygenase system ferredoxin subunit [Burkholderia
terrae BS001]
gi|389938081|gb|EIM99936.1| naphthalene 1,2-dioxygenase system ferredoxin subunit [Burkholderia
terrae BS001]
Length = 113
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Query: 82 SGGGGGGENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGL 141
SG W P+ P + G+ + ++ G+ +L +W DE+ + + + G S L
Sbjct: 3 SGVSTDASGWTPLCPFDDVTDGDG-LQVKIGDRMLAVWRVDELAFVTDDTCTHGDAS--L 59
Query: 142 INAKLTQDGCIVCPTTESTFDLRTGAVR 169
+ + IVC + FD+RTG VR
Sbjct: 60 VLTGMLDGFSIVCGLHQGEFDIRTGEVR 87
>gi|86604929|ref|YP_473692.1| CAB/ELIP/HLIP family protein [Synechococcus sp. JA-3-3Ab]
gi|86608723|ref|YP_477485.1| CAB/ELIP/HLIP family protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86553471|gb|ABC98429.1| CAB/ELIP/HLIP family protein [Synechococcus sp. JA-3-3Ab]
gi|86557265|gb|ABD02222.1| CAB/ELIP/HLIP family protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 50
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
FGFN +E +NG+AA IGF+L + E +TG+G+ G +
Sbjct: 11 FGFNEYAERLNGRAAMIGFVLAIVIEAVTGQGVASWLGLI 50
>gi|358456862|ref|ZP_09167083.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia sp. CN3]
gi|357079771|gb|EHI89209.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia sp. CN3]
Length = 107
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 95 VPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGC-IV 153
+P+ + GE + DG + + E +A +N P +G+ + + +GC I+
Sbjct: 8 LPVDFIEPGETTTVDVDGFPVAVANVDGEFYAFQNLCPHQGSK----LGGRALDEGCFII 63
Query: 154 CPTTESTFDLRTGA 167
CPT S +D+R+GA
Sbjct: 64 CPTHASRYDVRSGA 77
>gi|220906710|ref|YP_002482021.1| hypothetical protein Cyan7425_1282 [Cyanothece sp. PCC 7425]
gi|219863321|gb|ACL43660.1| hypothetical protein Cyan7425_1282 [Cyanothece sp. PCC 7425]
Length = 66
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FG+ +ELING+ A IGF+ LL EL+TG+ G
Sbjct: 27 FGWTAYAELINGRFAMIGFIALLLLELITGQDFFTWIGL 65
>gi|403729735|ref|ZP_10948649.1| putative 2Fe-2S ferredoxin [Gordonia rhizosphera NBRC 16068]
gi|403202866|dbj|GAB92980.1| putative 2Fe-2S ferredoxin [Gordonia rhizosphera NBRC 16068]
Length = 120
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 92 VPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLTQDG 150
+ V PLS LP GE + D + E++AI++ S + + ++G + +G
Sbjct: 2 IEVCPLSDLPPGEAIRVEADPAIAVFHTEDGEIYAIDDTCSHQDASLADGWL------EG 55
Query: 151 CIV-CPTTESTFDLRTGAV 168
C V CP S FDLRTGAV
Sbjct: 56 CEVECPLHASKFDLRTGAV 74
>gi|238497636|ref|XP_002380053.1| monooxygenase, putative [Aspergillus flavus NRRL3357]
gi|220693327|gb|EED49672.1| monooxygenase, putative [Aspergillus flavus NRRL3357]
Length = 611
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 61/162 (37%), Gaps = 17/162 (10%)
Query: 64 KLTCKAAEVSVTEEESSASGGGGGGENWVPVVPLSALPKGERRVIIQDGETILLLWYKDE 123
KL CK V E G GGG+ WV + P E+ I+ + IL
Sbjct: 108 KLNCKVDSVEYCER------GDGGGKEWVIKCTTTTEPGHEKSNTIRTRKLILA-----T 156
Query: 124 VFAIENRSP---AEGAYSEGLINAK---LTQDGCIVCPTTESTFDLRTGAVRDWYPNNPV 177
+ R P + ++ L +AK QD P+ ++T D GA RD + V
Sbjct: 157 GLTSQPRIPTFSGQQSFGAPLFHAKDFVRYQDTLFAKPSYDNTGDQHEGAARDDHTPVTV 216
Query: 178 LRALTPALSTLYIFPVKTDEKNIYIRMEGGASSDASAEIVFS 219
L A T+Y K N IR G + S VFS
Sbjct: 217 LGGSKSAWDTVYACASKGHRVNWVIRPSGTGPAWVSPAAVFS 258
>gi|255954973|ref|XP_002568239.1| Pc21g12080 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589950|emb|CAP96105.1| Pc21g12080 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 551
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 59/132 (44%), Gaps = 23/132 (17%)
Query: 109 IQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTGAV 168
I++G+ +LL+ D+V A+ R GA L N +T+DG + CP + +++ TG V
Sbjct: 29 IEEGK-VLLVKLDDKVHALNTRCTHYGA---PLKNGVVTEDGRLTCPWHGACYNVPTGDV 84
Query: 169 RDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEGGASSDASAEIVFSGKAQPGVTA 228
D PA + L F V E +YI A E V +G+ P V
Sbjct: 85 ED-----------APAPNALNKFAVFEKEDGVYIL--------AKEEDVKAGQRNPVVKC 125
Query: 229 TDVNIEEVRMVV 240
+ EE +VV
Sbjct: 126 SVSQPEEKLVVV 137
>gi|254430608|ref|ZP_05044311.1| conserved hypothetical protein [Cyanobium sp. PCC 7001]
gi|197625061|gb|EDY37620.1| conserved hypothetical protein [Cyanobium sp. PCC 7001]
Length = 47
Score = 38.5 bits (88), Expect = 3.2, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGF+ +E NG+ A +GF++ L ELLTG+G+L G
Sbjct: 8 FGFSAFAETWNGRLAMLGFVIGLATELLTGQGILSQVGL 46
>gi|188533857|ref|YP_001907654.1| Nitrite reductase [NAD(P)H] large subunit [Erwinia tasmaniensis
Et1/99]
gi|188028899|emb|CAO96765.1| Nitrite reductase [NAD(P)H] large subunit [Erwinia tasmaniensis
Et1/99]
Length = 1400
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 55/135 (40%), Gaps = 18/135 (13%)
Query: 88 GENWVPVVPLSALPKGERRVIIQDGETILLLWYKDE---VFAIENRSPAEGA--YSEGLI 142
GE WV V LS +P G+ I L D VFA+ N P A + GL+
Sbjct: 1274 GEGWVDVCELSRIPANAGVAARLAGQQIALFHLPDHPQRVFALSNHEPGSDANVLARGLV 1333
Query: 143 NAKLTQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
+ + ++ P + F L G ++ A + L ++PVK D +++
Sbjct: 1334 -GDVKGEPVVISPLYKRRFRLEDGC------------SIDDADTALRVWPVKIDNGRVWV 1380
Query: 203 RMEGGASSDASAEIV 217
A +D +A I+
Sbjct: 1381 GKGPVAKADNTATII 1395
>gi|21284050|ref|NP_647138.1| assimilatory nitrite reductase [Staphylococcus aureus subsp. aureus
MW2]
gi|49487181|ref|YP_044402.1| assimilatory nitrite reductase small subunit [Staphylococcus aureus
subsp. aureus MSSA476]
gi|253730072|ref|ZP_04864237.1| assimilatory nitrite reductase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|297209781|ref|ZP_06926177.1| nitrate reductase electron transfer subunit, small subunit
[Staphylococcus aureus subsp. aureus ATCC 51811]
gi|300910793|ref|ZP_07128243.1| nitrate reductase electron transfer subunit, small subunit
[Staphylococcus aureus subsp. aureus TCH70]
gi|385782629|ref|YP_005758800.1| nitrite reductase [NAD(P)H], small subunit [Staphylococcus aureus
subsp. aureus 11819-97]
gi|418573230|ref|ZP_13137430.1| nitrite reductase [NAD(P)H], small subunit [Staphylococcus aureus
subsp. aureus 21333]
gi|418932705|ref|ZP_13486531.1| nitrite reductase [NAD(P)H], small subunit [Staphylococcus aureus
subsp. aureus CIGC128]
gi|418988335|ref|ZP_13536008.1| nitrite reductase [NAD(P)H], small subunit [Staphylococcus aureus
subsp. aureus CIG1835]
gi|448742096|ref|ZP_21724049.1| assimilatory nitrite reductase [Staphylococcus aureus KT/314250]
gi|21205493|dbj|BAB96186.1| assimilatory nitrite reductase [Staphylococcus aureus subsp. aureus
MW2]
gi|49245624|emb|CAG44103.1| assimilatory nitrite reductase small subunit [Staphylococcus aureus
subsp. aureus MSSA476]
gi|253726159|gb|EES94888.1| assimilatory nitrite reductase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|296885454|gb|EFH24391.1| nitrate reductase electron transfer subunit, small subunit
[Staphylococcus aureus subsp. aureus ATCC 51811]
gi|300887773|gb|EFK82968.1| nitrate reductase electron transfer subunit, small subunit
[Staphylococcus aureus subsp. aureus TCH70]
gi|364523618|gb|AEW66368.1| nitrite reductase [NAD(P)H], small subunit [Staphylococcus aureus
subsp. aureus 11819-97]
gi|371983317|gb|EHP00464.1| nitrite reductase [NAD(P)H], small subunit [Staphylococcus aureus
subsp. aureus 21333]
gi|377720123|gb|EHT44293.1| nitrite reductase [NAD(P)H], small subunit [Staphylococcus aureus
subsp. aureus CIG1835]
gi|377772879|gb|EHT96625.1| nitrite reductase [NAD(P)H], small subunit [Staphylococcus aureus
subsp. aureus CIGC128]
gi|445547117|gb|ELY15390.1| assimilatory nitrite reductase [Staphylococcus aureus KT/314250]
Length = 104
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 18/101 (17%)
Query: 105 RRVIIQDGETILLLWYKDEVFAIENRSP-AEGAYSEGLINAKLTQDGCIVCPTTESTFDL 163
++VI++D E L L ++ AI N P +G SEG ++ + + CP + DL
Sbjct: 21 KKVIVKDKEVGLFLTESGKIHAIHNICPHKQGPLSEGTVSGEY-----VFCPLHDQKIDL 75
Query: 164 RTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRM 204
TG V++ P + ++ V+ + N+YI +
Sbjct: 76 NTGIVQE------------PDEGCVDVYEVEVTDGNVYICL 104
>gi|428778912|ref|YP_007170698.1| Chlorophyll A-B binding protein [Dactylococcopsis salina PCC 8305]
gi|428693191|gb|AFZ49341.1| Chlorophyll A-B binding protein [Dactylococcopsis salina PCC 8305]
Length = 49
Score = 38.5 bits (88), Expect = 3.3, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
FGFN ++E NG+ A IGF+ L E+L+G+G+L G L
Sbjct: 10 FGFNPSAENWNGRLAMIGFVAALLTEILSGQGVLHFWGLL 49
>gi|359463200|ref|ZP_09251763.1| high light inducible protein [Acaryochloris sp. CCMEE 5410]
Length = 86
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLK 281
FGFN +E +G+ A IGF LL+ ELLTG+G++
Sbjct: 49 FGFNTFAETFSGRVAMIGFDLLVLTELLTGRGIIH 83
>gi|440700503|ref|ZP_20882749.1| biphenyl dioxygenase system ferredoxin component family protein
[Streptomyces turgidiscabies Car8]
gi|440276896|gb|ELP65099.1| biphenyl dioxygenase system ferredoxin component family protein
[Streptomyces turgidiscabies Car8]
Length = 119
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 52/122 (42%), Gaps = 12/122 (9%)
Query: 92 VPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLTQDG 150
+P L+ LP+GE + D + EVFAI++ + A ++G + +G
Sbjct: 2 IPACRLADLPRGEALRLDIDPPVSVFHTDDGEVFAIDDTCTHQDASLADGWL------EG 55
Query: 151 CIV-CPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKN----IYIRME 205
C V CP S FDLRTGAV PV + V TD N I R+
Sbjct: 56 CEVECPLHASKFDLRTGAVDSPPAKLPVRTHEVVVEDGMIYVQVSTDAPNLPPCIAARLA 115
Query: 206 GG 207
GG
Sbjct: 116 GG 117
>gi|391871809|gb|EIT80965.1| monooxygenase, putative [Aspergillus oryzae 3.042]
Length = 611
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 61/162 (37%), Gaps = 17/162 (10%)
Query: 64 KLTCKAAEVSVTEEESSASGGGGGGENWVPVVPLSALPKGERRVIIQDGETILLLWYKDE 123
KL CK V E G GGG+ WV + P E+ I+ + IL
Sbjct: 108 KLNCKVDSVEYCER------GDGGGKEWVIKCTTTTEPGHEKSNTIRTRKLILA-----T 156
Query: 124 VFAIENRSP---AEGAYSEGLINAK---LTQDGCIVCPTTESTFDLRTGAVRDWYPNNPV 177
+ R P + ++ L +AK QD P+ ++T D GA RD + V
Sbjct: 157 GLTSQPRIPTFSGQQSFGAPLFHAKDFARYQDTLFAKPSYDNTGDQHEGAARDDHTPITV 216
Query: 178 LRALTPALSTLYIFPVKTDEKNIYIRMEGGASSDASAEIVFS 219
L A T+Y K N IR G + S VFS
Sbjct: 217 LGGSKSAWDTVYACASKGHRVNWVIRPSGTGPAWVSPAAVFS 258
>gi|348585305|ref|XP_003478412.1| PREDICTED: apoptosis-inducing factor 3-like isoform 3 [Cavia
porcellus]
Length = 607
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 15/110 (13%)
Query: 94 VVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIV 153
V + L G+ R + +LL+ E A+ ++ P GA L+ L++ G +
Sbjct: 81 VCHVKDLENGQMREVELGWGKVLLVKDNGEFHALGHKCPHYGA---PLVKGVLSR-GRVR 136
Query: 154 CPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIR 203
CP + F++ TG + D+ P L +L+ F VK +++ +Y+R
Sbjct: 137 CPWHGACFNISTGDLEDF-----------PGLDSLHKFQVKIEKEKVYVR 175
>gi|27378094|ref|NP_769623.1| oxidodeductase [Bradyrhizobium japonicum USDA 110]
gi|27351240|dbj|BAC48248.1| hypothetical oxidodeductase [Bradyrhizobium japonicum USDA 110]
Length = 507
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 15/91 (16%)
Query: 113 ETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTGAVRDWY 172
E +LL+ EVFAIE PA Y G + L D I CP + F LR+G
Sbjct: 35 EDVLLVQAGGEVFAIE---PACSHY-HGPLAEGLVVDDTIRCPWHHACFSLRSGEA---- 86
Query: 173 PNNPVLRALTPALSTLYIFPVKTDEKNIYIR 203
P PALS L ++ V D+ I ++
Sbjct: 87 -TRP------PALSALAVWEVTRDQDRIIVQ 110
>gi|359793494|ref|ZP_09296242.1| nitrite reductase (NAD(P)H), small subunit [Mesorhizobium alhagi
CCNWXJ12-2]
gi|359250316|gb|EHK53832.1| nitrite reductase (NAD(P)H), small subunit [Mesorhizobium alhagi
CCNWXJ12-2]
Length = 108
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 90 NWVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
NW+ + ++ +P +G R V G+ + +D+VFAIE+ P +G S+G+++
Sbjct: 2 NWIAIGSITDIPQRGARCVATPQGKIAVFRTAEDQVFAIEDHCPHKGGPLSQGIVHG--- 58
Query: 148 QDGCIVCPTTESTFDLRTG 166
+ CP L TG
Sbjct: 59 --AAVTCPLHNWVISLETG 75
>gi|428769274|ref|YP_007161064.1| CAB/ELIP/HLIP superfamily protein [Cyanobacterium aponinum PCC
10605]
gi|428683553|gb|AFZ53020.1| CAB/ELIP/HLIP superfamily protein [Cyanobacterium aponinum PCC
10605]
Length = 47
Score = 38.5 bits (88), Expect = 3.6, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 242 EDLEG-FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
E+ EG GF +E NG+ A +GFL+ + EL+TGKG+L G +
Sbjct: 2 ENKEGKLGFTAFAENWNGRLAMLGFLIGIATELMTGKGILAQLGLM 47
>gi|113955265|ref|YP_730447.1| ferrochelatase [Synechococcus sp. CC9311]
gi|113882616|gb|ABI47574.1| Ferrochelatase [Synechococcus sp. CC9311]
Length = 56
Score = 38.5 bits (88), Expect = 3.6, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGF+ +E NG+ A +GF++ L ELLTG+G+L G
Sbjct: 18 FGFSNFAETWNGRLAMLGFVIGLGTELLTGQGILSQIGL 56
>gi|157412415|ref|YP_001483281.1| high light inducible protein [Prochlorococcus marinus str. MIT
9215]
gi|157386990|gb|ABV49695.1| possible high light inducible protein [Prochlorococcus marinus str.
MIT 9215]
Length = 91
Score = 38.5 bits (88), Expect = 3.7, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 242 EDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
ED FG++ SE+ NG+ A IGFL ++ EL + + LK G L
Sbjct: 47 EDKYKFGWSSYSEITNGRFAMIGFLAIILIELFSQQSFLKWAGIL 91
>gi|148239385|ref|YP_001224772.1| Rieske domain-containing protein [Synechococcus sp. WH 7803]
gi|147847924|emb|CAK23475.1| Predicted membrane protein fused with a rieske [2Fe-2S] domain
[Synechococcus sp. WH 7803]
Length = 369
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 18/120 (15%)
Query: 87 GGENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAE-GAYSEGLINAK 145
GE +V V+ L+ L +G ++ GE + L D V+A+ N + G ++G +N
Sbjct: 260 AGEGFVDVMALADLEEGCGIPVVIRGERVALFRQGDAVYALSNVCAHQNGPLADGRLN-- 317
Query: 146 LTQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
GC+VCP + TG + P P +FPV+ E +Y+ ++
Sbjct: 318 ---HGCVVCPWHGWEYRADTGV------SPPPFEERVP------VFPVRIQEGRVYVALQ 362
>gi|427713154|ref|YP_007061778.1| Chlorophyll A-B binding protein [Synechococcus sp. PCC 6312]
gi|427377283|gb|AFY61235.1| Chlorophyll A-B binding protein [Synechococcus sp. PCC 6312]
Length = 69
Score = 38.5 bits (88), Expect = 3.7, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
Query: 248 GFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
GF +EL NG+ A +GF+ LL E+ TG+GL+ GFL
Sbjct: 31 GFTPYAELFNGRLAMVGFISLLALEVFTGQGLI---GFL 66
>gi|322370416|ref|ZP_08044975.1| assimilatory nitrite reductase subunit [Haladaptatus
paucihalophilus DX253]
gi|320550124|gb|EFW91779.1| assimilatory nitrite reductase subunit [Haladaptatus
paucihalophilus DX253]
Length = 96
Score = 38.5 bits (88), Expect = 3.8, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 98 SALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTT 157
+ P+GE ++ DG I + DE +A+EN+ P +G G ++ ++ + CP
Sbjct: 5 AEFPEGEGTMVEFDGREIAVFRSGDEFYAVENKCPHQG----GPLSDGKVEETSVFCPWH 60
Query: 158 ESTFDLRTG 166
FDL TG
Sbjct: 61 GFEFDLTTG 69
>gi|218440956|ref|YP_002379285.1| CAB/ELIP/HLIP superfamily protein [Cyanothece sp. PCC 7424]
gi|218173684|gb|ACK72417.1| CAB/ELIP/HLIP superfamily protein [Cyanothece sp. PCC 7424]
Length = 47
Score = 38.5 bits (88), Expect = 3.8, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
FGF +E NG+ A +GF++ + ELLTGKG+L G +
Sbjct: 8 FGFTSFAENWNGRLAMLGFVIGIATELLTGKGILAQLGLM 47
>gi|448368648|ref|ZP_21555415.1| Rieske (2Fe-2S) domain-containing protein [Natrialba aegyptia DSM
13077]
gi|445651191|gb|ELZ04099.1| Rieske (2Fe-2S) domain-containing protein [Natrialba aegyptia DSM
13077]
Length = 625
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
Query: 93 PVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEG-AYSEGLINAKLTQDGC 151
PVV L L + R + DG + + ++ E+ A+ NR P G EG ++ DG
Sbjct: 17 PVVALDELEEAGRELASIDGTPLAIFHHEGEIRAVNNRCPHMGFPLVEGTVD-----DGI 71
Query: 152 IVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDE 197
+ C + F+L G D + ++ + T+Y+ P T E
Sbjct: 72 LTCHWHHARFELSCGDTFDPWADDVQTYPVAVRDGTVYVNPKPTRE 117
>gi|414164235|ref|ZP_11420482.1| hypothetical protein HMPREF9697_02383 [Afipia felis ATCC 53690]
gi|410882015|gb|EKS29855.1| hypothetical protein HMPREF9697_02383 [Afipia felis ATCC 53690]
Length = 106
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 88 GENWVPVVPLSALPKGERR-VIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAK 145
E W+P+ PL + +GERR V + G+ ILL+ ++++ A+ P + +EG +
Sbjct: 5 AETWLPLGPLEDMEEGERREVTLPTGKIILLIRAEEKIHAVCADCPHQDTPLAEGSVEGT 64
Query: 146 LTQDGCIVCPTTESTFDLRTG 166
+ + CP +D+RTG
Sbjct: 65 I-----LTCPLHFWQWDIRTG 80
>gi|16264858|ref|NP_437650.1| nitrite reductase [NAD(P)H], small subunit protein [Sinorhizobium
meliloti 1021]
gi|384533032|ref|YP_005715696.1| nitrite reductase (NAD(P)H) small subunit [Sinorhizobium meliloti
BL225C]
gi|418400768|ref|ZP_12974305.1| nitrite reductase [NAD(P)H], small subunit protein [Sinorhizobium
meliloti CCNWSX0020]
gi|433610735|ref|YP_007194196.1| nitrite reductase [NAD(P)H], small subunit [Sinorhizobium meliloti
GR4]
gi|15140997|emb|CAC49510.1| nitrite reductase [NAD(P)H] [Sinorhizobium meliloti 1021]
gi|333815208|gb|AEG07875.1| nitrite reductase (NAD(P)H), small subunit [Sinorhizobium meliloti
BL225C]
gi|359505255|gb|EHK77780.1| nitrite reductase [NAD(P)H], small subunit protein [Sinorhizobium
meliloti CCNWSX0020]
gi|429555677|gb|AGA10597.1| nitrite reductase [NAD(P)H], small subunit [Sinorhizobium meliloti
GR4]
Length = 112
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 90 NWVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
NW+ + ++ +P +G R V G+ + DEVFAIE+ P +G S+G+++
Sbjct: 4 NWIAIGDINDIPLRGARCVRTPTGKIAVFRTAHDEVFAIEDHCPHKGGPLSQGIVHGT-- 61
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
+ CP L TG +AL + P++ D +++
Sbjct: 62 ---AVTCPLHNWVISLETG------------KALGADEGEVRTIPIRNDNGALFV 101
>gi|424905103|ref|ZP_18328610.1| naphthalene 1,2-dioxygenase system ferredoxin component
[Burkholderia thailandensis MSMB43]
gi|390929497|gb|EIP86900.1| naphthalene 1,2-dioxygenase system ferredoxin component
[Burkholderia thailandensis MSMB43]
Length = 92
Score = 38.5 bits (88), Expect = 3.9, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 111 DGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTG 166
DG I + DE+ A+EN P ++ L+ DG + CP E+ FD+RTG
Sbjct: 13 DGVEIGIYRVGDELHALENVCP----HAYALLTQGFVDDGTVECPLHEAVFDIRTG 64
>gi|271961894|ref|YP_003336090.1| hypothetical protein [Streptosporangium roseum DSM 43021]
gi|270505069|gb|ACZ83347.1| WD40 repeat-domain-containing protein-like protein
[Streptosporangium roseum DSM 43021]
Length = 924
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 56/129 (43%), Gaps = 15/129 (11%)
Query: 43 CGHALSLNYPFSPREIPTCGRKLTCKAAEVSVTEEESSASGGGGGGENWVPVVPLSALPK 102
G+ SL + RE+ T R T + +VSV + +A GG G PV +S P
Sbjct: 559 TGYVTSLAFSPDGRELVTASRDDTARLWDVSVHRQLGAALTGGSG-----PVGSVSFSPD 613
Query: 103 GERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVCPTTESTFD 162
G RR+ + + +W EV A RS A ++ ++ A+ + DG + E
Sbjct: 614 G-RRLATAHADGVARVW---EVAATPPRSVALTGHTGAVMVARFSPDGRTLATAGED--- 666
Query: 163 LRTGAVRDW 171
G VR W
Sbjct: 667 ---GTVRLW 672
>gi|359463666|ref|ZP_09252229.1| CAB/ELIP/HLIP superfamily protein [Acaryochloris sp. CCMEE 5410]
Length = 55
Score = 38.5 bits (88), Expect = 4.1, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
FGFN +E +G+ A +GF L + EL+TGKG+L G +
Sbjct: 16 FGFNPFAEAWSGRLAMVGFYLAIVIELVTGKGVLHFWGLM 55
>gi|428218023|ref|YP_007102488.1| hypothetical protein Pse7367_1782 [Pseudanabaena sp. PCC 7367]
gi|427989805|gb|AFY70060.1| hypothetical protein Pse7367_1782 [Pseudanabaena sp. PCC 7367]
Length = 126
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 280
FGF +E NG+ A IGF+ LL E++TG+GL+
Sbjct: 87 FGFTKFAETFNGRLAMIGFVSLLITEMITGQGLI 120
>gi|284991348|ref|YP_003409902.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Geodermatophilus obscurus DSM 43160]
gi|284064593|gb|ADB75531.1| Rieske (2Fe-2S) iron-sulphur domain protein [Geodermatophilus
obscurus DSM 43160]
Length = 163
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
Query: 92 VPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLTQDG 150
+PV P +ALP GE + D E I + V+ I++ + A ++G + DG
Sbjct: 2 LPVCPTTALPPGEATRVEAD-EPIAVFNVDVAVYTIDDTCTHQDASLADGWL------DG 54
Query: 151 CIV-CPTTESTFDLRTGAV 168
C V CP S FDLRTG V
Sbjct: 55 CAVECPLHASCFDLRTGKV 73
>gi|448409578|ref|ZP_21574792.1| ferredoxin domain-containing protein [Halosimplex carlsbadense
2-9-1]
gi|445672924|gb|ELZ25493.1| ferredoxin domain-containing protein [Halosimplex carlsbadense
2-9-1]
Length = 587
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 71/164 (43%), Gaps = 21/164 (12%)
Query: 87 GGENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEG-AYSEGLINAK 145
G + + L+ L + R V G ++ L ++ EV+ ++NR P G ++G +
Sbjct: 8 GPDGYEEAADLATLQEDGRAVATVGGHSVALFHHEGEVYGVDNRCPHMGFPLAKGSV--- 64
Query: 146 LTQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
+DG + C + F+L G D + ++ + FP D+ +Y+ +
Sbjct: 65 --EDGLLTCHWHHARFELSCGDTFDIWADD------------VQTFPTAVDDGAVYV--D 108
Query: 206 GGASSDASAEIVFSGKAQPGVTATDVNIEEVRMVVDEDLEGFGF 249
+D + E+ + + G+ A ++++ + + D G GF
Sbjct: 109 PDPETDVAPEVHWRNRLVDGM-AENLSLVLAKSAIHLDHHGEGF 151
>gi|254412690|ref|ZP_05026463.1| hypothetical protein MC7420_1334 [Coleofasciculus chthonoplastes
PCC 7420]
gi|196180425|gb|EDX75416.1| hypothetical protein MC7420_1334 [Coleofasciculus chthonoplastes
PCC 7420]
Length = 62
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
FG+ +E ING+ A I F+ LL EL+TGKGL G +
Sbjct: 23 FGWTPYAEQINGRFAMIAFVALLLIELITGKGLFGWLGLI 62
>gi|299471410|emb|CBN79363.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 194
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 18/155 (11%)
Query: 75 TEEESSASGG---GGGGENWVPVVPLSALPK--GERRVIIQDGETILLLWYKDEVFAIEN 129
T + AS G GE WVP++P+ P + V + D + + + ++ + N
Sbjct: 31 TRTRAQASQGLSMAASGEQWVPILPIDEAPTPGTAKSVYVADLDLCVAADERGLLYVLGN 90
Query: 130 RS-PAEGAYSEGLINAKLTQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTL 188
+ PA S L++ + +D P + D+ TG V +W P N + + L+P L
Sbjct: 91 KCPPANQPLSFSLVSNNIIKD-----PVLGTKIDIETGDVIEWCP-NLLGKLLSPILGAQ 144
Query: 189 YIFPVKTDEKNIYIRMEGGASSDASAEIVFSGKAQ 223
P + +R +GG + A++ + KA+
Sbjct: 145 ---PENAGVQTFVVRQKGG---NLEAKVNVNAKAE 173
>gi|392420411|ref|YP_006457015.1| ferredoxin component NahAb of naphthalene dioxygenase [Pseudomonas
stutzeri CCUG 29243]
gi|429333014|ref|ZP_19213722.1| ferredoxin component NahAb of naphthalene dioxygenase [Pseudomonas
putida CSV86]
gi|3914128|sp|Q51493.3|NDOA_PSEAE RecName: Full=Naphthalene 1,2-dioxygenase system ferredoxin subunit
gi|1255668|dbj|BAA12239.1| ferredoxin [Pseudomonas aeruginosa]
gi|300676628|gb|ADK26578.1| ferrodoxin [Pseudomonas sp. N1(2010)]
gi|390982599|gb|AFM32592.1| ferredoxin component NahAb of naphthalene dioxygenase [Pseudomonas
stutzeri CCUG 29243]
gi|428762360|gb|EKX84566.1| ferredoxin component NahAb of naphthalene dioxygenase [Pseudomonas
putida CSV86]
Length = 104
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 19/118 (16%)
Query: 89 ENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
E W+ V L +P+G+ + +G+ + L + E++A +N A S+G + +
Sbjct: 3 EKWIDAVALYEIPEGDVLGVTVEGKELALYEVEGEIYATDNLCTHGAARMSDGFLEGRE- 61
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRAL-TPALSTLYIFPVKTDEKNIYIRM 204
I CP + FD+ TG RAL P + +PVK + + + I +
Sbjct: 62 ----IECPLHQGRFDVCTG------------RALCAPVTQNIKTYPVKIEGQRVMIDL 103
>gi|414079566|ref|YP_007000990.1| CAB/ELIP/HLIP family protein [Anabaena sp. 90]
gi|413972845|gb|AFW96933.1| CAB/ELIP/HLIP-related protein [Anabaena sp. 90]
Length = 56
Score = 38.1 bits (87), Expect = 4.4, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN +E +NG+AA IGF+L++ E T +G++ G
Sbjct: 17 FGFNEYAERLNGRAAMIGFVLMVIIEYATNQGVIAWLGL 55
>gi|116072747|ref|ZP_01470013.1| possible high light inducible protein [Synechococcus sp. BL107]
gi|116064634|gb|EAU70394.1| possible high light inducible protein [Synechococcus sp. BL107]
Length = 47
Score = 38.1 bits (87), Expect = 4.4, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGF+ +E NG+ A +GF++ L ELLTG+G+L G
Sbjct: 9 FGFSNFAETWNGRLAMLGFVIGLGTELLTGQGILSQIGL 47
>gi|330821315|ref|YP_004350177.1| Iron-sulfur cluster-binding protein, rieske family protein
[Burkholderia gladioli BSR3]
gi|327373310|gb|AEA64665.1| Iron-sulfur cluster-binding protein, rieske family protein
[Burkholderia gladioli BSR3]
Length = 108
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Query: 89 ENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLT 147
+ W + L + E + G+ I + DE+FA+ + + SEG +
Sbjct: 7 DTWHALGALDEFSEDEPAARVVGGKPIAIFRLGDELFALHDLCTHGHARLSEGFV----- 61
Query: 148 QDGCIVCPTTESTFDLRTGAVR 169
+DGC+ CP + D+R+GA R
Sbjct: 62 EDGCVECPLHQGLIDIRSGAPR 83
>gi|159039780|ref|YP_001539033.1| nitrite reductase (NAD(P)H) small subunit [Salinispora arenicola
CNS-205]
gi|157918615|gb|ABW00043.1| nitrite reductase (NAD(P)H), small subunit [Salinispora arenicola
CNS-205]
Length = 111
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAY--SEGLINAKLT 147
W V PLS L G + D + + D++FAI+N P AY S G++ ++
Sbjct: 7 TWTVVCPLSRLDPGRGVAALIDDVQVAVFRTADDLFAIDNWDPVAHAYVLSRGIVGSR-- 64
Query: 148 QDGC--IVCPTTESTFDLRTGAVRDWYPNNPVLR 179
G + P + +DLRTG D P V R
Sbjct: 65 -GGVPTVASPLHKQVYDLRTGDCLD-LPGTAVRR 96
>gi|78778451|ref|YP_396563.1| high light inducible protein-like [Prochlorococcus marinus str. MIT
9312]
gi|78711950|gb|ABB49127.1| high light inducible protein-like protein [Prochlorococcus marinus
str. MIT 9312]
Length = 91
Score = 38.1 bits (87), Expect = 4.6, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 230 DVNIEEVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
D+ +E + + ED FG++ SE+ NG+ A IGFL ++ EL + + LK G L
Sbjct: 36 DIKFDEKSIDI-EDEYKFGWSNYSEITNGRFAMIGFLAIILIELFSQQSFLKWAGIL 91
>gi|72162384|ref|YP_290041.1| dioxygenase [Thermobifida fusca YX]
gi|71916116|gb|AAZ56018.1| putative dioxygenase [Thermobifida fusca YX]
Length = 110
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 17/118 (14%)
Query: 89 ENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLT 147
E + V LS LP+ + +G + ++ + E++AI + S AE SEG +
Sbjct: 5 ETYTRVCALSDLPEEGALGVEVNGTPVAVVRSEGEIYAISDLCSHAEVNLSEGEV----- 59
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
+DG I C S FDLRTG P NP PA + + VK D ++ + ++
Sbjct: 60 EDGTIECWLHGSCFDLRTGK-----PLNP------PATQAVPTYRVKIDGDDVLVSLD 106
>gi|428220853|ref|YP_007105023.1| Chlorophyll A-B binding protein [Synechococcus sp. PCC 7502]
gi|427994193|gb|AFY72888.1| Chlorophyll A-B binding protein [Synechococcus sp. PCC 7502]
Length = 72
Score = 38.1 bits (87), Expect = 4.6, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 222 AQPGVTATDVN-IEEVRMVVDEDLEG--FGFNVTSELINGKAAAIGFLLLLDFELLTGKG 278
AQ VT VN + E++ + D++ FGF +E NG+ A IGF+ + EL+TG+G
Sbjct: 5 AQHYVTFLSVNKLTELKNMSDDNRNAWTFGFTNGAENWNGRLAMIGFVAAIAVELITGQG 64
Query: 279 LLKGTGFL 286
+L G +
Sbjct: 65 VLHFWGII 72
>gi|410670557|ref|YP_006922928.1| rieske (2Fe-2S) iron-sulfur domain-containing protein [Methanolobus
psychrophilus R15]
gi|409169685|gb|AFV23560.1| rieske (2Fe-2S) iron-sulfur domain-containing protein [Methanolobus
psychrophilus R15]
Length = 103
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 18/116 (15%)
Query: 91 WVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLTQD 149
W + S L +G ++ ++ +G ILLL + +AI N+ + E S+G + +
Sbjct: 4 WFFAINESELDEGNKKPLLMEGNKILLLRQEGGFYAISNKCTHMECPLSKGDLEGYV--- 60
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
I CP + FD+R+G D PA T K D+ +Y+ +E
Sbjct: 61 --IKCPCHDWRFDIRSGEFLD------AKEITVPAYET------KVDDGKVYVNLE 102
>gi|221210965|ref|ZP_03583945.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia multivorans CGD1]
gi|221169921|gb|EEE02388.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia multivorans CGD1]
Length = 108
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLTQ 148
W P+ L + E + + I + DE+FA+ + S SEG + +
Sbjct: 8 EWHPLGTLDEFSEDEPAARVAGQKPIAVFRIGDELFAMHDLCSHGHARLSEGYV-----E 62
Query: 149 DGCIVCPTTESTFDLRTGA 167
DGC+ CP + D+RTGA
Sbjct: 63 DGCVECPLHQGLIDIRTGA 81
>gi|113954724|ref|YP_731501.1| CAB/ELIP/HLIP family protein [Synechococcus sp. CC9311]
gi|113882075|gb|ABI47033.1| CAB/ELIP/HLIP family protein [Synechococcus sp. CC9311]
Length = 45
Score = 38.1 bits (87), Expect = 4.7, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGF+ +E NG+ A +GF++ L ELLTG+G+L G
Sbjct: 6 FGFSSFAEQWNGRLAMLGFVIGLGTELLTGQGILSQVGL 44
>gi|334320525|ref|YP_004557154.1| nitrite reductase (NAD(P)H) small subunit [Sinorhizobium meliloti
AK83]
gi|384538738|ref|YP_005722822.1| nitrite reductase [Sinorhizobium meliloti SM11]
gi|407723183|ref|YP_006842844.1| nitrite reductase (NAD(P)H) small subunit [Sinorhizobium meliloti
Rm41]
gi|334098264|gb|AEG56274.1| nitrite reductase (NAD(P)H), small subunit [Sinorhizobium meliloti
AK83]
gi|336037391|gb|AEH83321.1| nitrite reductase [NAD(P)H] [Sinorhizobium meliloti SM11]
gi|407323243|emb|CCM71844.1| nitrite reductase (NAD(P)H) small subunit [Sinorhizobium meliloti
Rm41]
Length = 112
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 90 NWVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
NW+ + ++ +P +G R V G+ + DEVFAIE+ P +G S+G+++
Sbjct: 4 NWIAIGDINDIPLRGARCVRTPTGKIAVFRTADDEVFAIEDHCPHKGGPLSQGIVHGT-- 61
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
+ CP L TG +AL + P++ D +++
Sbjct: 62 ---AVTCPLHNWVISLETG------------KALGADEGEVRTIPIRNDNGALFV 101
>gi|161521491|ref|YP_001584918.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia multivorans
ATCC 17616]
gi|189352340|ref|YP_001947967.1| ferredoxin subunit of anthranilate dioxygenase [Burkholderia
multivorans ATCC 17616]
gi|221197169|ref|ZP_03570216.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia multivorans CGD2M]
gi|221203841|ref|ZP_03576859.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia multivorans CGD2]
gi|421471975|ref|ZP_15920211.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans ATCC
BAA-247]
gi|421474337|ref|ZP_15922382.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans CF2]
gi|160345541|gb|ABX18626.1| Rieske (2Fe-2S) domain protein [Burkholderia multivorans ATCC
17616]
gi|189336362|dbj|BAG45431.1| ferredoxin subunit of anthranilate dioxygenase [Burkholderia
multivorans ATCC 17616]
gi|221176007|gb|EEE08436.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia multivorans CGD2]
gi|221183723|gb|EEE16123.1| aromatic-ring-hydroxylating dioxygenase, ferredoxin subunit
[Burkholderia multivorans CGD2M]
gi|400224182|gb|EJO54437.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans ATCC
BAA-247]
gi|400232372|gb|EJO61995.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans CF2]
Length = 108
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLTQ 148
W P+ L + E + + I + DE+FA+ + S SEG + +
Sbjct: 8 EWHPLGTLDEFSEDEPAARVAGQKPIAVFRIGDELFAMHDLCSHGHARLSEGYV-----E 62
Query: 149 DGCIVCPTTESTFDLRTGA 167
DGC+ CP + D+RTGA
Sbjct: 63 DGCVECPLHQGLIDIRTGA 81
>gi|411119084|ref|ZP_11391464.1| Chlorophyll A-B binding protein [Oscillatoriales cyanobacterium
JSC-12]
gi|410710947|gb|EKQ68454.1| Chlorophyll A-B binding protein [Oscillatoriales cyanobacterium
JSC-12]
Length = 58
Score = 38.1 bits (87), Expect = 4.8, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 241 DEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
D + FGF +EL NG+ A IGF+ L EL+T +G+L G L
Sbjct: 13 DRNAWKFGFTPQAELWNGRFAMIGFVAALITELITNQGVLHFLGLL 58
>gi|352095887|ref|ZP_08956834.1| CAB/ELIP/HLIP family protein [Synechococcus sp. WH 8016]
gi|351677243|gb|EHA60392.1| CAB/ELIP/HLIP family protein [Synechococcus sp. WH 8016]
Length = 45
Score = 38.1 bits (87), Expect = 4.9, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGF+ +E NG+ A +GF++ L ELLTG+G+L G
Sbjct: 6 FGFSSFAEQWNGRLAMMGFVIGLGTELLTGQGILSQIGL 44
>gi|448349152|ref|ZP_21537996.1| Rieske (2Fe-2S) domain-containing protein [Natrialba taiwanensis
DSM 12281]
gi|445641492|gb|ELY94571.1| Rieske (2Fe-2S) domain-containing protein [Natrialba taiwanensis
DSM 12281]
Length = 631
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
Query: 93 PVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEG-AYSEGLINAKLTQDGC 151
PVV L L + R + DG + + ++ E+ A+ NR P G EG ++ DG
Sbjct: 17 PVVALDELEEAGRELASIDGTPLAIFHHEGEIRAVNNRCPHMGFPLVEGTVD-----DGI 71
Query: 152 IVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDE 197
+ C + F+L G D + ++ + T+Y+ P T E
Sbjct: 72 LTCHWHHARFELSCGDTFDPWADDVQTYPVAVRDGTVYVNPKPTRE 117
>gi|427710430|ref|YP_007052807.1| CAB/ELIP/HLIP family protein [Nostoc sp. PCC 7107]
gi|427362935|gb|AFY45657.1| CAB/ELIP/HLIP-related protein [Nostoc sp. PCC 7107]
Length = 56
Score = 38.1 bits (87), Expect = 4.9, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN +E +NG+AA IGF L++ E +T +G+L G
Sbjct: 17 FGFNEYAERLNGRAAMIGFGLMVVIEYVTNQGVLSWLGL 55
>gi|443321633|ref|ZP_21050679.1| Chlorophyll A-B binding protein [Gloeocapsa sp. PCC 73106]
gi|442788678|gb|ELR98365.1| Chlorophyll A-B binding protein [Gloeocapsa sp. PCC 73106]
Length = 48
Score = 38.1 bits (87), Expect = 5.0, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 241 DEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
+E+ FGF ++E +NG+ A IGF+ + EL++G+G+L G +
Sbjct: 3 NENKNKFGFTPSAENLNGRLAMIGFISAVIVELVSGQGVLHFLGLM 48
>gi|325964892|ref|YP_004242798.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Arthrobacter phenanthrenivorans Sphe3]
gi|323470979|gb|ADX74664.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Arthrobacter phenanthrenivorans Sphe3]
Length = 304
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 15/94 (15%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR--SPAEGAYSEG-LINAKL 146
W + PL+ LP+G+ I+ E LL++ + E + + S G EG L KL
Sbjct: 184 GWQSLAPLAELPEGKLHKIVVS-EIPLLVYREAEDIRVLSDVCSHLSGPLHEGKLKGGKL 242
Query: 147 TQ-----------DGCIVCPTTESTFDLRTGAVR 169
+ D C+VCP STF LRTG V+
Sbjct: 243 QESASADGGSRGGDPCVVCPWHGSTFSLRTGEVQ 276
>gi|379058784|ref|ZP_09849310.1| Rieske (2Fe-2S) domain-containing protein [Serinicoccus profundi
MCCC 1A05965]
Length = 159
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 10/89 (11%)
Query: 95 VPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGCIVC 154
VPLS +P G R +QD E I++ + EV A + P G + ++ DG +VC
Sbjct: 66 VPLSDVPVGGSR-YLQDAEVIVVQPTEGEVVAYDATCP-----HSGCMVSETGDDGTLVC 119
Query: 155 PTTESTFDLRTGAVRDWYPNNPVLRALTP 183
P S F GA+ + P L+P
Sbjct: 120 PCHGSAFAAADGALV----SGPATEGLSP 144
>gi|78214080|ref|YP_382859.1| hypothetical protein Syncc9605_2576 [Synechococcus sp. CC9605]
gi|78198539|gb|ABB36304.1| hypothetical protein Syncc9605_2576 [Synechococcus sp. CC9605]
Length = 66
Score = 38.1 bits (87), Expect = 5.1, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTG 284
FGF+ +E NG+ A +GF++ L E+LTG+G+L G
Sbjct: 27 FGFSSFAETWNGRLAMMGFIIGLGTEILTGQGILSQIG 64
>gi|119489260|ref|ZP_01622067.1| CAB/ELIP/HLIP superfamily protein [Lyngbya sp. PCC 8106]
gi|119454734|gb|EAW35879.1| CAB/ELIP/HLIP superfamily protein [Lyngbya sp. PCC 8106]
Length = 63
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 246 GFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTG 284
GFG+ +E ING+ A +GF+LLL E TG+ L G
Sbjct: 23 GFGWTRYAEKINGRFAMVGFILLLGLEFFTGQDLFTWLG 61
>gi|428772124|ref|YP_007163912.1| high intensity light-inducible lhc-like protein [Cyanobacterium
stanieri PCC 7202]
gi|428686403|gb|AFZ46263.1| high intensity light-inducible lhc-like protein [Cyanobacterium
stanieri PCC 7202]
Length = 46
Score = 38.1 bits (87), Expect = 5.3, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 242 EDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
ED GF +E NG+ A +GFL+ + ELLTG+G+L G +
Sbjct: 2 EDKGKLGFTAFAENWNGRLAMLGFLIGILTELLTGQGILSQLGLM 46
>gi|85680306|gb|ABC72336.1| sugar ABC transporter permease protein [uncultured haloarchaeon]
Length = 585
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 18/115 (15%)
Query: 89 ENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEG-AYSEGLINAKLT 147
+ + V + L R V + +G + L ++ EV+A++NR P G S+G +
Sbjct: 8 QEFTEVANIDVLRDNGRTVAMVEGRPVALFHHEGEVYALDNRCPHMGFPLSKGSL----- 62
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
+DG + C + F+L G D + ++ + FP + + +Y+
Sbjct: 63 KDGLLTCDWHHARFELAQGDTLDIWADD------------VQTFPTRVQDGTVYV 105
>gi|110668206|ref|YP_658017.1| ferredoxin domain-containing protein [Haloquadratum walsbyi DSM
16790]
gi|109625953|emb|CAJ52395.1| iron-sulfur (2Fe-2S) domain protein [Haloquadratum walsbyi DSM
16790]
Length = 585
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 18/115 (15%)
Query: 89 ENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEG-AYSEGLINAKLT 147
+ + V + L R V + +G + L ++ EV+A++NR P G S+G +
Sbjct: 8 QEFTEVANIDVLRDNGRTVAMVEGRPVALFHHEGEVYALDNRCPHMGFPLSKGSL----- 62
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
+DG + C + F+L G D + ++ + FP + + +Y+
Sbjct: 63 KDGLLTCDWHHARFELAQGDTLDIWADD------------VQTFPTRVQDGTVYV 105
>gi|91778775|ref|YP_553983.1| putative dioxygenase, ferredoxin reductase component [Burkholderia
xenovorans LB400]
gi|91691435|gb|ABE34633.1| Putative dioxygenase, ferredoxin reductase component [Burkholderia
xenovorans LB400]
Length = 521
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 43/101 (42%), Gaps = 17/101 (16%)
Query: 94 VVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLTQDGCI 152
V LS L ++ DGE ILL+ D V A P GA EG + G I
Sbjct: 8 VAQLSQLRSDRAERVMVDGEPILLIRDGDTVHAYSADCPHAGAPLEEGALC-----HGRI 62
Query: 153 VCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPV 193
+CP + TFD+ TG V + PAL L +PV
Sbjct: 63 ICPWHKGTFDVATGDVLE-----------PPALVALDRYPV 92
>gi|4104752|gb|AAD02135.1| naphthalene dioxygenase ferredoxin [Pseudomonas stutzeri]
gi|300391844|gb|ADK11286.1| naphthalene dioxygenase ferredoxin [Pseudomonas stutzeri]
Length = 118
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 19/118 (16%)
Query: 89 ENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
E W+ V L +P+G+ + +G+ + L + E++A +N A S+G + +
Sbjct: 17 EKWIDAVALYEIPEGDVLGVTVEGKELALYEVEGEIYATDNLCTHGAARMSDGFLEGREI 76
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRAL-TPALSTLYIFPVKTDEKNIYIRM 204
+ CP + FD+ TG RAL P + +PVK + + + I +
Sbjct: 77 E-----CPLHQGRFDVCTG------------RALCAPVTQNIKTYPVKIEGQRVMIDL 117
>gi|163849015|ref|YP_001637059.1| Rieske (2Fe-2S) domain-containing protein [Chloroflexus aurantiacus
J-10-fl]
gi|222526977|ref|YP_002571448.1| Rieske (2Fe-2S) domain-containing protein [Chloroflexus sp.
Y-400-fl]
gi|163670304|gb|ABY36670.1| Rieske (2Fe-2S) domain protein [Chloroflexus aurantiacus J-10-fl]
gi|222450856|gb|ACM55122.1| Rieske (2Fe-2S) domain protein [Chloroflexus sp. Y-400-fl]
Length = 106
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWY-KDEVFAIENR-SPAEGAYSEGLINAKLT 147
V V L +P G R G I + + +V+A+++ S E + SEG ++ T
Sbjct: 2 QLVEVCTLDDVPVGSGRAFTVGGRRIAIFRVAEHDVYALDDLCSHDEASLSEGDLD---T 58
Query: 148 QDGCIVCPTTESTFDLRTGAVR 169
++ C+ CP S FDLRTG R
Sbjct: 59 EELCVECPMHGSLFDLRTGKPR 80
>gi|429243678|ref|XP_001713117.2| flavoprotein [Schizosaccharomyces pombe 972h-]
gi|387912904|sp|Q10499.3|AIF1_SCHPO RecName: Full=Apoptosis-inducing factor 1
gi|347834220|emb|CAB55362.4| apoptosis-inducing factor homolog Aif1 (predicted)
[Schizosaccharomyces pombe]
Length = 611
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 17/101 (16%)
Query: 115 ILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLTQDGCIVCPTTESTFDLRTGAVRDWYP 173
+LL+ ++ FA + GA ++G++ T DG IVCP + F+ TG V D
Sbjct: 81 VLLVRARNTYFATAGKCSHYGAPLAKGVV----TSDGHIVCPWHGACFNAATGDVED--- 133
Query: 174 NNPVLRALTPALSTLYIFPVKTD-EKNIYIRMEGGASSDAS 213
TPA++ L FPV + + +++I +E + AS
Sbjct: 134 --------TPAIAALRTFPVTEEGDGSLWIEVEDKNDNGAS 166
>gi|427417736|ref|ZP_18907919.1| Chlorophyll A-B binding protein [Leptolyngbya sp. PCC 7375]
gi|425760449|gb|EKV01302.1| Chlorophyll A-B binding protein [Leptolyngbya sp. PCC 7375]
Length = 47
Score = 37.7 bits (86), Expect = 5.5, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 242 EDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
E+ FGF +E NG+ A +GF++ L EL+TG+G+L G +
Sbjct: 3 EENAKFGFTQLAENWNGRLAMLGFVIGLATELMTGQGILSQLGLM 47
>gi|307151098|ref|YP_003886482.1| high intensity light-inducible lhc-like protein [Cyanothece sp. PCC
7822]
gi|306981326|gb|ADN13207.1| high intensity light-inducible lhc-like protein [Cyanothece sp. PCC
7822]
Length = 47
Score = 37.7 bits (86), Expect = 5.6, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
FGF +E NG+ A +GF++ + ELLTGKG+L G +
Sbjct: 8 FGFTSFAENWNGRLAMLGFVIGILTELLTGKGILSQLGLM 47
>gi|150376661|ref|YP_001313257.1| nitrite reductase (NAD(P)H) small subunit [Sinorhizobium medicae
WSM419]
gi|150031208|gb|ABR63324.1| nitrite reductase (NAD(P)H), small subunit [Sinorhizobium medicae
WSM419]
Length = 112
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 90 NWVPVVPLSALP-KGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
NW + ++ +P +G R + G+ + ++EVFAIE+ P +G S+G+++
Sbjct: 4 NWTAIGDINDIPLRGARCIRTPTGKIAVFRTAENEVFAIEDHCPHKGGPLSQGIVHGT-- 61
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
+ CP L TG +AL + PVK D +Y+
Sbjct: 62 ---AVTCPLHNWVISLETG------------KALGADEGEVRTIPVKNDNGALYV 101
>gi|428211488|ref|YP_007084632.1| Chlorophyll A-B binding protein [Oscillatoria acuminata PCC 6304]
gi|427999869|gb|AFY80712.1| Chlorophyll A-B binding protein [Oscillatoria acuminata PCC 6304]
Length = 47
Score = 37.7 bits (86), Expect = 5.7, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 240 VDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
+D+ FGF +E NG+ A +GF++ + ELLTG G+L G +
Sbjct: 1 MDDTKAKFGFTEFAETWNGRLAMLGFVIGVATELLTGHGILSQIGLM 47
>gi|428218333|ref|YP_007102798.1| putative CAB/ELIP/HLIP family protein [Pseudanabaena sp. PCC 7367]
gi|427990115|gb|AFY70370.1| putative CAB/ELIP/HLIP family protein [Pseudanabaena sp. PCC 7367]
Length = 49
Score = 37.7 bits (86), Expect = 5.9, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGFN +E+ NG+ A +GF++ L E +TG G+L G
Sbjct: 10 FGFNEFAEVWNGRLAMLGFVIGLATEYITGSGILSQIGL 48
>gi|389871235|ref|YP_006378654.1| nitrite reductase (NAD(P)H) small subunit [Advenella kashmirensis
WT001]
gi|388536484|gb|AFK61672.1| nitrite reductase (NAD(P)H) small subunit [Advenella kashmirensis
WT001]
Length = 115
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 89 ENWVPVVPLSALPKGERRVIIQDGETILLLWYKDE--VFAIENRSPAEGAYSEGLINAKL 146
E W PV + +P RVI + G + ++ E V+AI ++ P +G G ++A L
Sbjct: 10 EKWTPVCATNEIPARGARVIRRHGLDDIAVFRSGEGAVYAIVDKCPHKG----GPLSAGL 65
Query: 147 TQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRAL 181
+ CP DL TG V+ P+ +R +
Sbjct: 66 VHGASVTCPLHGMVIDLPTGQVQ--APDEGCVRTI 98
>gi|443314761|ref|ZP_21044295.1| Chlorophyll A-B binding protein [Leptolyngbya sp. PCC 6406]
gi|442785638|gb|ELR95444.1| Chlorophyll A-B binding protein [Leptolyngbya sp. PCC 6406]
Length = 47
Score = 37.7 bits (86), Expect = 5.9, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 242 EDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
E+ FGF +E NG+ A +GF + L ELLTG+G+L G +
Sbjct: 3 EEQAKFGFTQFAENWNGRLAMLGFTIGLATELLTGQGILSQLGLM 47
>gi|33860624|ref|NP_892185.1| high light inducible protein [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|33633566|emb|CAE18523.1| possible high light inducible protein [Prochlorococcus marinus
subsp. pastoris str. CCMP1986]
Length = 77
Score = 37.7 bits (86), Expect = 6.0, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 228 ATDVNIEEVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
+ ++ IEE + +++ E FG++ SE+ NG+ A +GFL ++ EL++ K L G
Sbjct: 20 SEEIKIEEQSIEIEDRYE-FGWSNYSEITNGRFAMLGFLAIILIELISQKSFLNWAGIF 77
>gi|221636244|ref|YP_002524120.1| rieske [Thermomicrobium roseum DSM 5159]
gi|221157991|gb|ACM07109.1| rieske [Thermomicrobium roseum DSM 5159]
Length = 200
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 23/141 (16%)
Query: 68 KAAEVSVTEEESSASGGGGGGE-----NWVPVVPLSALPKGERRVIIQDGETILLLWYKD 122
+AA+V+ E E +A G E ++VPV PL+ +P+ DG LL+ + +
Sbjct: 70 RAADVA-EEREPAAPGAAPVQEQASESDFVPVKPLAEVPEATIVRFEVDGAPRLLVRFGE 128
Query: 123 EVFAIENRSPAEGA-YSEGLINAKLTQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRAL 181
++A++ E A +EG + +DG I CP S F+L TG V
Sbjct: 129 RLYAVDGICTHEEAELAEGDL-----EDGVIYCPLHGSGFELATGRVTSL---------- 173
Query: 182 TPALSTLYIFPVKTDEKNIYI 202
PA L ++ V + +Y+
Sbjct: 174 -PATKPLPVYEVVVRDGMVYV 193
>gi|345013154|ref|YP_004815508.1| Rieske (2Fe-2S) domain-containing protein [Streptomyces
violaceusniger Tu 4113]
gi|344039503|gb|AEM85228.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Streptomyces
violaceusniger Tu 4113]
Length = 120
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 11/106 (10%)
Query: 92 VPVVPLSALPKGER-RVIIQDGETILLLWYKDEVF-AIENR-SPAEGAYSEGLINAKLTQ 148
+PV + LP+GE RV D + +++ D F AI++ S + + SEG +
Sbjct: 2 IPVCRIEDLPEGESLRVEAGDATATIAVFHTDGAFYAIDDTCSHQDASLSEGWL------ 55
Query: 149 DGCIV-CPTTESTFDLRTGAVRDWYPNNPV-LRALTPALSTLYIFP 192
+GC V CP + FDLR+G PV A+T LY+ P
Sbjct: 56 EGCYVECPLHAALFDLRSGEPTCLPARKPVRTHAVTVVDGMLYVHP 101
>gi|159902645|ref|YP_001549989.1| high light inducible protein [Prochlorococcus marinus str. MIT
9211]
gi|159887821|gb|ABX08035.1| possible high light inducible protein [Prochlorococcus marinus str.
MIT 9211]
Length = 48
Score = 37.7 bits (86), Expect = 6.3, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
+GF +E+ NG+ A IG L+ L ELLTG+G+L GF
Sbjct: 9 YGFVNYAEIWNGRLAMIGILVGLSTELLTGQGILGQIGF 47
>gi|427724661|ref|YP_007071938.1| high intensity light-inducible lhc-like protein [Leptolyngbya sp.
PCC 7376]
gi|427356381|gb|AFY39104.1| high intensity light-inducible lhc-like protein [Leptolyngbya sp.
PCC 7376]
Length = 47
Score = 37.7 bits (86), Expect = 6.4, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
FGF++ +E NG+ A +GF++ + E+LTGKG+L G +
Sbjct: 8 FGFSLFAENWNGRLAMLGFVIGILTEVLTGKGILAQLGLM 47
>gi|332709854|ref|ZP_08429810.1| hypothetical protein LYNGBM3L_46230 [Moorea producens 3L]
gi|332351225|gb|EGJ30809.1| hypothetical protein LYNGBM3L_46230 [Moorea producens 3L]
Length = 48
Score = 37.7 bits (86), Expect = 6.5, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 239 VVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
+ E FGF SE NG+ A +GF + L EL+TG G+L+ G +
Sbjct: 1 MTQEQESKFGFTNFSETWNGRLAMLGFAIGLATELITGHGILEQLGLM 48
>gi|428311235|ref|YP_007122212.1| Chlorophyll A-B binding protein [Microcoleus sp. PCC 7113]
gi|428252847|gb|AFZ18806.1| Chlorophyll A-B binding protein [Microcoleus sp. PCC 7113]
Length = 72
Score = 37.7 bits (86), Expect = 6.6, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 235 EVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 280
E ++ VDE + GF +E +NG+ A IGF+ LL E LTG GL+
Sbjct: 22 EPKVYVDET-QRTGFTDYAEKLNGRLAMIGFVSLLALEALTGHGLI 66
>gi|428213152|ref|YP_007086296.1| Chlorophyll A-B binding protein [Oscillatoria acuminata PCC 6304]
gi|428001533|gb|AFY82376.1| Chlorophyll A-B binding protein [Oscillatoria acuminata PCC 6304]
Length = 72
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
+GF ++E+ NG+ A IGFL E+ TG+G L+ GFL
Sbjct: 26 WGFTPSAEIWNGRLAMIGFLAATLIEIATGQGYLRFLGFL 65
>gi|383776798|ref|YP_005461364.1| hypothetical protein AMIS_16280 [Actinoplanes missouriensis 431]
gi|381370030|dbj|BAL86848.1| hypothetical protein AMIS_16280 [Actinoplanes missouriensis 431]
Length = 110
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 20/112 (17%)
Query: 94 VVPLSALPKGERRVIIQDGETILLLWYKDEVF-AIENR-SPAEGAYSEGLINAKLTQDGC 151
V P S + KG + DG + ++ D+ F A+ + S A A SEG + DGC
Sbjct: 6 VGPASDVAKGTALQVEVDGVEVAIVHADDDNFYAVRDECSHASVALSEGEV------DGC 59
Query: 152 IV-CPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYI 202
+ C S FDLRTG P+ P PA+ + ++PV+ + +IY+
Sbjct: 60 TLECWLHGSRFDLRTGE-----PSGP------PAIDPVAVYPVEIRDGDIYV 100
>gi|333982952|ref|YP_004512162.1| Rieske (2Fe-2S) domain-containing protein [Methylomonas methanica
MC09]
gi|333806993|gb|AEF99662.1| Rieske (2Fe-2S) iron-sulfur domain protein [Methylomonas methanica
MC09]
Length = 108
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 15/106 (14%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQD 149
+W+ VV SAL +GE V+ DG + + E +AIE+ +GA + + +L D
Sbjct: 7 DWIDVVAESALAEGEHVVVDVDGYDVAIFKLDGEFYAIEDVCTHDGAE---IASGELEGD 63
Query: 150 GCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKT 195
IVCP + F ++TG V+ PA + FPV+
Sbjct: 64 E-IVCPRHGARFCVKTGQVK-----------CAPAYEDVATFPVRV 97
>gi|302540704|ref|ZP_07293046.1| 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit
[Streptomyces hygroscopicus ATCC 53653]
gi|302458322|gb|EFL21415.1| 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit
[Streptomyces himastatinicus ATCC 53653]
Length = 112
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 11/107 (10%)
Query: 92 VPVVPLSALPKGER-RVIIQDGETILLLWYKDEVF-AIENR-SPAEGAYSEGLINAKLTQ 148
+PV + LP+GE R+ DG + +++ + F AI++ S + + SEG +
Sbjct: 2 IPVGRIEDLPEGESLRIEAGDGHAAIAVFHSEGAFYAIDDTCSHQDASLSEGWL------ 55
Query: 149 DGCIV-CPTTESTFDLRTGAVRDWYPNNPV-LRALTPALSTLYIFPV 193
+GC V CP + FDLR+G PV A+T LY+ P+
Sbjct: 56 EGCYVECPLHAALFDLRSGMPTCLPARKPVRTHAVTVVDGMLYVHPL 102
>gi|33865150|ref|NP_896709.1| high light inducible protein [Synechococcus sp. WH 8102]
gi|33638834|emb|CAE07131.1| putative high light inducible protein [Synechococcus sp. WH 8102]
Length = 50
Score = 37.7 bits (86), Expect = 6.9, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 244 LEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 280
L FGF+ +E +NG+AA +GF+ LL E+ G GLL
Sbjct: 12 LPRFGFHGHTEKLNGRAAMLGFIALLAVEIKLGHGLL 48
>gi|159903909|ref|YP_001551253.1| high light inducible protein [Prochlorococcus marinus str. MIT
9211]
gi|159889085|gb|ABX09299.1| possible high light inducible protein [Prochlorococcus marinus str.
MIT 9211]
Length = 86
Score = 37.7 bits (86), Expect = 6.9, Method: Composition-based stats.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTG 276
FGFN +EL+NG+AA GFL+L+ E++ G
Sbjct: 45 FGFNQNAELVNGRAAMFGFLMLVITEIVFG 74
>gi|148240395|ref|YP_001225782.1| high light inducible protein [Synechococcus sp. WH 7803]
gi|147848934|emb|CAK24485.1| High light inducible protein [Synechococcus sp. WH 7803]
Length = 50
Score = 37.7 bits (86), Expect = 7.0, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 244 LEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 280
L +GF+ +E +NG+AA +GF+ LL E+ G GLL
Sbjct: 12 LPRYGFHTHTERLNGRAAMLGFIALLAVEIKLGHGLL 48
>gi|90576579|ref|YP_534821.1| ferredoxin component NahAb of naphthalene dioxygenase [Pseudomonas
putida]
gi|374325475|ref|YP_005083673.1| ferredoxin component NahAb of naphthalene dioxygenase [Pseudomonas
sp. MC1]
gi|151386|gb|AAA25901.1| ferredoxin [Pseudomonas putida]
gi|90567932|dbj|BAE92155.1| ferredoxin component NahAb of naphthalene dioxygenase [Pseudomonas
putida]
gi|359392999|gb|AEV45875.1| ferredoxin component NahAb of naphthalene dioxygenase [Pseudomonas
sp. MC1]
Length = 107
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 19/120 (15%)
Query: 89 ENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLT 147
E W+ V LS +P+G+ + +G+ + L + E++A +N A S+G + +
Sbjct: 3 EKWIEAVALSDIPEGDVLGVTVEGKELALYEVEGEIYATDNLCTHGAARMSDGYLEGREI 62
Query: 148 QDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRAL-TPALSTLYIFPVKTDEKNIYIRMEG 206
+ CP + FD+ TG RAL P + + VK + + I + G
Sbjct: 63 E-----CPLHQGRFDVCTG------------RALCAPVTENIKTYAVKIENLRVMIDLSG 105
>gi|377808706|ref|YP_004979898.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia sp. YI23]
gi|357939903|gb|AET93460.1| Rieske (2Fe-2S) domain protein [Burkholderia sp. YI23]
Length = 92
Score = 37.7 bits (86), Expect = 7.0, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 92 VPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQDGC 151
+ + P A G RR++ +G +++L + AI+N P GA L N +L DG
Sbjct: 5 IRIAPADAPEAGARRIMFVEGRSVVLFNIDGVIHAIDNSCPHNGA---SLANGRL--DGH 59
Query: 152 IV-CPTTESTFDLRTGAV 168
I+ CP FDL +G +
Sbjct: 60 ILQCPAHGLRFDLASGCM 77
>gi|170697894|ref|ZP_02888978.1| Rieske (2Fe-2S) domain protein [Burkholderia ambifaria IOP40-10]
gi|170137169|gb|EDT05413.1| Rieske (2Fe-2S) domain protein [Burkholderia ambifaria IOP40-10]
Length = 108
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLTQ 148
W P+ + + E + + I + DE+FA+ + S SEG + +
Sbjct: 8 QWHPLGAIDEFSEDEPAARVAGQKPIAVFRIGDELFAMHDLCSHGHARLSEGYV-----E 62
Query: 149 DGCIVCPTTESTFDLRTGA 167
DGC+ CP + D+RTGA
Sbjct: 63 DGCVECPLHQGLIDIRTGA 81
>gi|75907633|ref|YP_321929.1| high light inducible protein [Anabaena variabilis ATCC 29413]
gi|75701358|gb|ABA21034.1| CAB/ELIP/HLIP superfamily of protein [Anabaena variabilis ATCC
29413]
Length = 59
Score = 37.4 bits (85), Expect = 7.5, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 229 TDVNIEEVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
TD +V D + +GF +E+ NG+ A IGFL + EL +G+G L G L
Sbjct: 2 TDTTKISASVVEDRNSWRWGFTPQAEIWNGRLAMIGFLAAILIELFSGQGFLHFWGIL 59
>gi|145590417|ref|YP_001152419.1| molybdenum cofactor synthesis domain-containing protein
[Pyrobaculum arsenaticum DSM 13514]
gi|145282185|gb|ABP49767.1| molybdenum cofactor synthesis domain protein [Pyrobaculum
arsenaticum DSM 13514]
Length = 171
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 23/78 (29%)
Query: 208 ASSDASAEIVFSGKAQPGVTATDVNIEEVRMVVDEDLEGFG-----------------FN 250
AS D +VF+G G+T TDV IE VR + D+++EGFG
Sbjct: 74 ASRDDVDVVVFTGGT--GITKTDVTIEAVRPLFDKEIEGFGDVFRHYSIQEVGTAAFLTR 131
Query: 251 VTSELINGKAAAIGFLLL 268
T+ +INGKA F LL
Sbjct: 132 ATAGVINGKA----FFLL 145
>gi|86608000|ref|YP_476762.1| CAB/ELIP/HLIP family protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86556542|gb|ABD01499.1| CAB/ELIP/HLIP family protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 56
Score = 37.4 bits (85), Expect = 7.5, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
FGF +E NG+ A +GF++ + ELLTG+G+L G +
Sbjct: 17 FGFTTFAEKWNGRLAMLGFVIGVATELLTGQGILSQIGLM 56
>gi|384252202|gb|EIE25678.1| hypothetical protein COCSUDRAFT_52537 [Coccomyxa subellipsoidea
C-169]
Length = 140
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 13/107 (12%)
Query: 108 IIQDGETILLLWYKDEVFAIENRSPAEGAYSEGLINAKLTQ--DG-CIVCPTTESTFDLR 164
I++D I+L EV+ + S A+ LI+A + + DG + P + +DL
Sbjct: 34 ILRDNSAIVLYQVGSEVYCSDANS---TAFKFPLIDANIIEREDGPAVEVPLDGTVYDLE 90
Query: 165 TGAVRDWYPNNPVLRALTPALS------TLYIFPVKTD-EKNIYIRM 204
TG V +W P N +R L AL L ++P + + E I+++
Sbjct: 91 TGKVLEWCPKNNPVRFLLGALKEKSEPVNLRVYPARVNSEGKIFVKF 137
>gi|427714686|ref|YP_007063310.1| Chlorophyll A-B binding protein [Synechococcus sp. PCC 6312]
gi|427378815|gb|AFY62767.1| Chlorophyll A-B binding protein [Synechococcus sp. PCC 6312]
Length = 54
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
FGFN +E +NG+AA +G + +L E TG+GLL G
Sbjct: 15 FGFNSFAERLNGRAAMVGVVAVLLVEYFTGQGLLSWLGLF 54
>gi|403512917|ref|YP_006644555.1| rieske domain protein [Nocardiopsis alba ATCC BAA-2165]
gi|402802057|gb|AFR09467.1| rieske domain protein [Nocardiopsis alba ATCC BAA-2165]
Length = 111
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 18/119 (15%)
Query: 89 ENWVPVVPLSALPKGERRVIIQDGET-ILLLWYKDEVFAIENR-SPAEGAYSEGLINAKL 146
+ W V L +P+ I D ET I L+ + E++A+ + S AE SEG +
Sbjct: 5 DGWTKVAELDEIPEEGVLGIETDDETPIALVRTEGEIYALRDVCSHAEVRLSEGEV---- 60
Query: 147 TQDGCIVCPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRME 205
+DG I C S FDL++GA P NP PA + + VK D ++ + ++
Sbjct: 61 -EDGTIECWLHGSCFDLKSGA-----PINP------PATRPVPTYDVKIDGDDVLVSLD 107
>gi|148553892|ref|YP_001261474.1| Rieske (2Fe-2S) domain-containing protein [Sphingomonas wittichii
RW1]
gi|148499082|gb|ABQ67336.1| Rieske (2Fe-2S) domain protein [Sphingomonas wittichii RW1]
Length = 101
Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Query: 100 LPKGE-RRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLTQDGCIVCPTT 157
+P+GE R+ + DG T+ + + FA ++ + + + SEG I +DG I+CP
Sbjct: 11 IPEGEVRQFAVDDGRTLAVYRVDGDYFATDDLCTHGDASLSEGEI-----EDGKILCPYH 65
Query: 158 ESTFDLRTG 166
+FD+RTG
Sbjct: 66 MGSFDIRTG 74
>gi|87302468|ref|ZP_01085285.1| possible high light inducible protein [Synechococcus sp. WH 5701]
gi|87282812|gb|EAQ74769.1| possible high light inducible protein [Synechococcus sp. WH 5701]
Length = 47
Score = 37.4 bits (85), Expect = 8.0, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGF +E NG+ A +GF++ L ELLTG+G+L G
Sbjct: 8 FGFVAFAETWNGRLAMLGFVIGLGTELLTGQGILSQIGL 46
>gi|392867427|gb|EAS29347.2| hypothetical protein CIMG_07771 [Coccidioides immitis RS]
Length = 637
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 17/115 (14%)
Query: 97 LSALPKGERR-VIIQDGETILLLWYK--DEVFAIENRSPAEGAYSEGLINAKLTQDGCIV 153
L+ L GE+R V I+ E LL+ K +V A+ R GA L+ LT DG I
Sbjct: 94 LADLKDGEKREVSIEGLEEAKLLFVKLDGQVHALTARCTHYGA---PLVKGVLTPDGRIT 150
Query: 154 CPTTESTFDLRTGAVRDWYPNNPVLRALTPALSTLYIFPVKTDEKNIYIRMEGGA 208
CP + F++ TG + D PA + L F V + +Y++ + A
Sbjct: 151 CPWHGACFNVTTGDIED-----------APAPNALEKFDVFEKDSAVYVKADAEA 194
>gi|385210422|ref|ZP_10037290.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Burkholderia sp. Ch1-1]
gi|385182760|gb|EIF32036.1| ferredoxin subunit of nitrite reductase and ring-hydroxylating
dioxygenase [Burkholderia sp. Ch1-1]
Length = 104
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 89 ENWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLT 147
E W V L +P+GE + + L + VFA ++ + + + ++GLI
Sbjct: 3 EQWKQVATLDEIPEGETLRVEIGASALCLYRIESGVFATDDLCTHGQASLADGLIV---- 58
Query: 148 QDGCIV-CPTTESTFDLRTGA 167
DG ++ CP E FD+RTGA
Sbjct: 59 -DGSLIECPLHEGAFDIRTGA 78
>gi|427701516|ref|YP_007044738.1| Chlorophyll A-B binding protein [Cyanobium gracile PCC 6307]
gi|427344684|gb|AFY27397.1| Chlorophyll A-B binding protein [Cyanobium gracile PCC 6307]
Length = 47
Score = 37.4 bits (85), Expect = 8.2, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGF +E NG+ A +GF++ L ELLTG+G+L G
Sbjct: 8 FGFVAFAETWNGRLAMLGFVIGLGTELLTGQGILSQIGL 46
>gi|209524718|ref|ZP_03273265.1| CAB/ELIP/HLIP family protein [Arthrospira maxima CS-328]
gi|376004245|ref|ZP_09781986.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
gi|409993395|ref|ZP_11276537.1| CAB/ELIP/HLIP family protein [Arthrospira platensis str. Paraca]
gi|209494862|gb|EDZ95170.1| CAB/ELIP/HLIP family protein [Arthrospira maxima CS-328]
gi|291568626|dbj|BAI90898.1| high light inducible protein [Arthrospira platensis NIES-39]
gi|375327376|emb|CCE17739.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
gi|409935721|gb|EKN77243.1| CAB/ELIP/HLIP family protein [Arthrospira platensis str. Paraca]
Length = 47
Score = 37.4 bits (85), Expect = 8.4, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGFL 286
FGF +E NG+ A +GF++ + ELLTG+G+L G +
Sbjct: 8 FGFTEFAETWNGRLAMLGFVIGVGTELLTGQGILSQLGLM 47
>gi|427739337|ref|YP_007058881.1| Chlorophyll A-B binding protein [Rivularia sp. PCC 7116]
gi|427374378|gb|AFY58334.1| Chlorophyll A-B binding protein [Rivularia sp. PCC 7116]
Length = 58
Score = 37.4 bits (85), Expect = 8.6, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 12/65 (18%)
Query: 221 KAQPGVTATDVNIEEVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGLL 280
+ QP VT N+EE ++ GFN +E +NG+AA IGF +++ E +T +G+L
Sbjct: 5 QPQPTVTP---NLEEPKL---------GFNEYAERLNGRAAMIGFAIIVAIECITNQGVL 52
Query: 281 KGTGF 285
G
Sbjct: 53 AWLGL 57
>gi|254430464|ref|ZP_05044167.1| putative high light inducible protein [Cyanobium sp. PCC 7001]
gi|197624917|gb|EDY37476.1| putative high light inducible protein [Cyanobium sp. PCC 7001]
Length = 57
Score = 37.4 bits (85), Expect = 8.7, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 27/38 (71%)
Query: 242 EDLEGFGFNVTSELINGKAAAIGFLLLLDFELLTGKGL 279
E G+GF+ +EL+NG+ A +GF++ L E L+G+G+
Sbjct: 7 ESESGWGFHRRAELLNGRMAMLGFVIGLMVEALSGQGI 44
>gi|87302882|ref|ZP_01085686.1| possible high light inducible protein [Synechococcus sp. WH 5701]
gi|87282378|gb|EAQ74337.1| possible high light inducible protein [Synechococcus sp. WH 5701]
Length = 47
Score = 37.4 bits (85), Expect = 8.7, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTGF 285
FGF +E NG+ A +GF++ L ELLTG+G+L+ G
Sbjct: 8 FGFVAFAETWNGRLAMLGFVIGLATELLTGQGILQQIGL 46
>gi|355704609|gb|EHH30534.1| hypothetical protein EGK_20262, partial [Macaca mulatta]
Length = 1098
Score = 37.4 bits (85), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 1 MASTPSPFPQNYTFARPQAGSISRRKPPPTRQPLPSSPSSRCCG--HALSLNYPF 53
+ P P P ++T P A S S PPP P S+ SSR C H LN PF
Sbjct: 468 LCCLPVPHPPSHTLTHPCAHSSSHASPPPCPVPGASTQSSRHCSGYHKNVLNIPF 522
>gi|428221961|ref|YP_007106131.1| Chlorophyll A-B binding protein [Synechococcus sp. PCC 7502]
gi|427995301|gb|AFY73996.1| Chlorophyll A-B binding protein [Synechococcus sp. PCC 7502]
Length = 99
Score = 37.0 bits (84), Expect = 9.4, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 25/38 (65%)
Query: 247 FGFNVTSELINGKAAAIGFLLLLDFELLTGKGLLKGTG 284
FGF+ +EL NG+ A IGF+ L E+ TGKG+L G
Sbjct: 21 FGFSNFAELWNGRMAMIGFVAALAGEVTTGKGILGQIG 58
>gi|134292873|ref|YP_001116609.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
vietnamiensis G4]
gi|387904614|ref|YP_006334952.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia sp. KJ006]
gi|75392200|sp|Q84BZ1.1|ANDAB_BURCE RecName: Full=Anthranilate 1,2-dioxygenase ferredoxin subunit
gi|29568952|gb|AAO83641.1| anthranilate dioxygenase ferredoxin [Burkholderia cepacia]
gi|134136030|gb|ABO57144.1| Rieske (2Fe-2S) domain protein [Burkholderia vietnamiensis G4]
gi|387579506|gb|AFJ88221.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia sp. KJ006]
Length = 108
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENR-SPAEGAYSEGLINAKLTQ 148
W P+ + + E + + I + DE+FA+ + S SEG + +
Sbjct: 8 EWHPLGAIDEFTEDEPAARVAGQKPIAVFRIGDELFAMHDLCSHGHARLSEGYV-----E 62
Query: 149 DGCIVCPTTESTFDLRTGA 167
DGC+ CP + D+RTGA
Sbjct: 63 DGCVECPLHQGLIDIRTGA 81
>gi|159902613|ref|YP_001549957.1| high light inducible protein [Prochlorococcus marinus str. MIT
9211]
gi|159887789|gb|ABX08003.1| possible high light inducible protein [Prochlorococcus marinus str.
MIT 9211]
Length = 82
Score = 37.0 bits (84), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 211 DASAEIVFSGKAQPGVTATDVNIEEVRMVVDEDLEGFGFNVTSELINGKAAAIGFLLLLD 270
D+S E S K P T + +R D+ FG++ +E NG+ A +GFL +L
Sbjct: 12 DSSLENTESPKDSPNET------QPLRSASSTDVPSFGWSEYAERANGRFAMVGFLAILL 65
Query: 271 FELLTGKGLLKGTGFL 286
E+++ L+ GF+
Sbjct: 66 IEIISRTNFLQWAGFV 81
>gi|397167090|ref|ZP_10490533.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Enterobacter radicincitans DSM 16656]
gi|396091236|gb|EJI88803.1| pyridine nucleotide-disulfide oxidoreductase family protein
[Enterobacter radicincitans DSM 16656]
Length = 507
Score = 37.0 bits (84), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 21/115 (18%)
Query: 90 NWVPVVPLSALPKGERRVIIQDGETILLLWYKDEVFAIENRSPAEGA-YSEGLINAKLTQ 148
N+ V L++LP+ + + G +++L+ +V A +++ P GA +G +
Sbjct: 2 NYQYVTDLNSLPENQPVKVDVAGTSMILIRTLAQVRAFQSKCPHAGAPLEQGAVC----- 56
Query: 149 DGCIVCPTTESTFDLRTGAVRD--------WYP----NNPVL---RALTPALSTL 188
DG +VCP ++ FD+ G R+ YP N VL RAL+PA TL
Sbjct: 57 DGKLVCPWHKANFDITNGEWREPLALKSLKQYPVTLEGNRVLVSPRALSPASHTL 111
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.135 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,113,000,425
Number of Sequences: 23463169
Number of extensions: 233504806
Number of successful extensions: 823298
Number of sequences better than 100.0: 718
Number of HSP's better than 100.0 without gapping: 248
Number of HSP's successfully gapped in prelim test: 470
Number of HSP's that attempted gapping in prelim test: 822755
Number of HSP's gapped (non-prelim): 737
length of query: 298
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 157
effective length of database: 9,050,888,538
effective search space: 1420989500466
effective search space used: 1420989500466
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 76 (33.9 bits)