BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>022396
MLLCLLPIRSRTMSNLLSFELAISTPKSALEKSSLTSVKTPLISISSTKQLKITEASHSF
KTNTLSSSHRTSRQVCGVVTANAEMEEDQSEKEVAEGYTLTQFCDKIIDVFLNEKPRVKQ
WRKYLVFREDWNKYRESFYNRCRTRADEESEPTMKEKLISLARKVKKIDDEMESHYELLK
EIQDSPTDINAVVARRRKDFTGEFFRYLSLVSETHDSLEDCDAVARLATRCLSAVSAYDK
TLEHVETLDSAQAKFDDILNSPSVDVACEKIKSLAKAKELDSSLILLINGQRHNVLSI

High Scoring Gene Products

Symbol, full name Information P value
AT4G37920 protein from Arabidopsis thaliana 1.0e-82
AT1G36320 protein from Arabidopsis thaliana 2.3e-46

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  022396
        (298 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2121036 - symbol:AT4G37920 "AT4G37920" species...   829  1.0e-82   1
TAIR|locus:2035957 - symbol:AT1G36320 "AT1G36320" species...   486  2.3e-46   1


>TAIR|locus:2121036 [details] [associations]
            symbol:AT4G37920 "AT4G37920" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM;IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
            [GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
            EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161592 GO:GO:0009941
            EMBL:AL035538 GO:GO:0009535 PIR:T05619 EMBL:BT002988
            IPI:IPI00538492 RefSeq:NP_195505.2 UniGene:At.43573 PaxDb:Q84WN0
            PRIDE:Q84WN0 EnsemblPlants:AT4G37920.1 GeneID:829948
            KEGG:ath:AT4G37920 TAIR:At4g37920 eggNOG:NOG298618
            HOGENOM:HOG000237806 OMA:TIEDEYL PhylomeDB:Q84WN0
            ProtClustDB:CLSN2918855 Genevestigator:Q84WN0 Uniprot:Q84WN0
        Length = 427

 Score = 829 (296.9 bits), Expect = 1.0e-82, P = 1.0e-82
 Identities = 175/281 (62%), Positives = 214/281 (76%)

Query:    13 MSNLLSFELAISTPKSALE---KSSLTSVKTPLISISSTKQLKITEASH-SFKTNTLSSS 68
             M+NLL   +  S+    L    K+S T    P  +  +  + KI ++S  +F T+T++ +
Sbjct:     1 MANLLETSIFFSSADKLLSFPPKNSQTH-HLPFSAFINGGR-KIRKSSTITFATDTVTYN 58

Query:    69 HRTSRQVCGVVTANAEMEEDQSEKEVAEGYTLTQFCDKIIDVFLNEKPRVKQWRKYLVFR 128
               TS +V   V       ED  E EVAEGYT+ QFCDKIID+FLNEKP+VKQW+ YLV R
Sbjct:    59 GTTSAEVKSSV-------EDPMEVEVAEGYTMAQFCDKIIDLFLNEKPKVKQWKTYLVLR 111

Query:   129 EDWNKYRESFYNRCRTRADEESEPTMKEKLISLARKVKKIDDEMESHYELLKEIQDSPTD 188
             ++WNKY  +FY RCR RAD E++P +K+KL+SL  KVKKID EME H +LLKEIQ++PTD
Sbjct:   112 DEWNKYSVNFYKRCRIRADTETDPILKQKLVSLESKVKKIDKEMEKHNDLLKEIQENPTD 171

Query:   189 INAVVARRRKDFTGEFFRYLSLVSETHDSLEDCDAVARLATRCLSAVSAYDKTLEHVETL 248
             INA+ A+RR+DFTGEFFRY++L+SET D LED DAVARLATRCLSAVSAYD TLE VETL
Sbjct:   172 INAIAAKRRRDFTGEFFRYVTLLSETLDGLEDRDAVARLATRCLSAVSAYDNTLESVETL 231

Query:   249 DSAQAKFDDILNSPSVDVACEKIKSLAKAKELDSSLILLIN 289
             D+AQAKF+DILNSPSVD ACEKI+SLAKAKELDSSLILLIN
Sbjct:   232 DTAQAKFEDILNSPSVDSACEKIRSLAKAKELDSSLILLIN 272


>TAIR|locus:2035957 [details] [associations]
            symbol:AT1G36320 "AT1G36320" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0009073 "aromatic amino acid family biosynthetic
            process" evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
            evidence=RCA] EMBL:CP002684 EMBL:AC021199 HOGENOM:HOG000237806
            EMBL:AY057493 EMBL:AY085614 EMBL:AY103296 IPI:IPI00539746
            PIR:D86484 RefSeq:NP_564471.1 UniGene:At.18045 PRIDE:Q9C8X8
            EnsemblPlants:AT1G36320.1 GeneID:840539 KEGG:ath:AT1G36320
            TAIR:At1g36320 InParanoid:Q9C8X8 OMA:EVRILKY PhylomeDB:Q9C8X8
            ProtClustDB:CLSN2688352 Genevestigator:Q9C8X8 Uniprot:Q9C8X8
        Length = 414

 Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
 Identities = 92/207 (44%), Positives = 143/207 (69%)

Query:    84 EMEEDQSEKEVAEGYTLTQFCDKIIDVFLNEKPRVKQWRKYLVFREDWNKYRESFYNRCR 143
             E ++D SE+ V +   + + CDK+I+VF+ +KP    WR+ L F ++W+  R  FY RC+
Sbjct:    77 EEKKDGSEEVVVDNQRMIKVCDKLIEVFMVDKPTPSDWRRLLAFSKEWDSIRPHFYKRCQ 136

Query:   144 TRADEESEPTMKEKLISLARKVKKIDDEMESHYELLKEIQDSP-TDINAVVARRRKDFTG 202
              RAD E  P MK K+  LARK+K++D++++ H ELL  I+ +P  +I  +VARRRKDFT 
Sbjct:   137 ERADSEDNPEMKHKVHRLARKLKEVDEDIQRHNELLNVIKRTPPAEIGELVARRRKDFTN 196

Query:   203 EFFRYLSLVSETH-DSLEDCDAVARLATRCLSAVSAYDKTLEHVETLDSAQAKFDDILNS 261
             EFF +L  V+E++ D+ ++ +A+A L    ++AV AYD + E ++ L++A+ K  DI+NS
Sbjct:   197 EFFEHLHTVAESYYDNPDEQNALASLGKLSIAAVQAYDTSTESIDALNAAEMKLQDIINS 256

Query:   262 PSVDVACEKIKSLAKAKELDSSLILLI 288
             PS+D AC KI SLA+  +LDS+L+L+I
Sbjct:   257 PSLDAACRKIDSLAEKNQLDSALVLMI 283


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.128   0.351    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      298       298   0.00094  115 3  11 22  0.41    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  607 (65 KB)
  Total size of DFA:  204 KB (2115 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  31.12u 0.17s 31.29t   Elapsed:  00:00:02
  Total cpu time:  31.12u 0.17s 31.29t   Elapsed:  00:00:02
  Start:  Thu May  9 20:19:40 2013   End:  Thu May  9 20:19:42 2013

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