Query 022396
Match_columns 298
No_of_seqs 38 out of 40
Neff 2.8
Searched_HMMs 13730
Date Mon Mar 25 04:47:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022396.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/022396hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1s0pa_ a.192.1.1 (A:) N-termi 63.4 2.6 0.00019 34.6 3.6 56 155-215 41-96 (176)
2 d1hcia4 a.7.1.1 (A:633-746) al 51.7 20 0.0014 25.0 6.3 90 133-239 5-103 (114)
3 d1af7a1 a.58.1.1 (A:11-91) Che 48.6 6.5 0.00048 26.9 3.1 62 128-194 14-77 (81)
4 d1mmsa1 a.4.7.1 (A:71-140) Rib 33.6 17 0.0013 25.5 3.4 28 247-275 35-62 (70)
5 d1hc8a_ a.4.7.1 (A:) Ribosomal 30.5 26 0.0019 24.9 3.9 29 247-276 39-67 (74)
6 d1nzea_ a.24.18.1 (A:) Oxygen- 28.4 57 0.0042 24.0 5.9 52 207-260 51-102 (112)
7 d1ku9a_ a.4.5.36 (A:) DNA-bind 26.8 32 0.0023 24.6 4.0 84 97-180 55-148 (151)
8 d2bdua1 c.108.1.21 (A:7-297) C 26.6 41 0.003 28.3 5.3 88 104-209 58-148 (291)
9 d1cqxa1 a.1.1.2 (A:1-150) Flav 25.0 41 0.003 24.7 4.4 50 191-240 15-70 (150)
10 d1wy6a1 a.118.20.1 (A:7-167) H 23.8 20 0.0014 29.2 2.5 111 168-293 14-131 (161)
11 d1x9ba_ a.10.2.1 (A:) Hypothet 23.7 26 0.0019 23.8 2.7 24 252-275 6-29 (53)
12 d1i4da_ a.238.1.2 (A:) Arfapti 23.0 1.3E+02 0.0091 21.6 7.9 16 263-278 116-131 (200)
13 d1urva_ a.1.1.2 (A:) Cytoglobi 22.3 1.1E+02 0.0081 22.2 6.5 70 132-212 37-114 (154)
14 d2fmpa1 a.60.6.1 (A:10-91) DNA 21.7 14 0.001 25.9 1.0 17 265-281 58-74 (82)
15 d1zpya1 a.25.1.5 (A:4-94) Hypo 21.7 60 0.0044 23.9 4.7 44 143-192 35-78 (91)
16 d2dn3b1 a.1.1.2 (B:2-146) Hemo 21.5 71 0.0052 23.3 5.2 73 130-210 33-107 (145)
17 d2efka1 a.238.1.4 (A:10-288) C 20.8 48 0.0035 25.3 4.2 72 131-203 196-270 (279)
18 d1xbpg1 a.4.7.1 (G:72-143) Rib 20.7 39 0.0028 23.5 3.3 29 246-275 32-60 (72)
No 1
>d1s0pa_ a.192.1.1 (A:) N-terminal domain of adenylylcyclase associated protein, CAP {Dictyostelium discoideum [TaxId: 44689]}
Probab=63.37 E-value=2.6 Score=34.57 Aligned_cols=56 Identities=29% Similarity=0.466 Sum_probs=39.3
Q ss_pred HHHHHHHHHHhhhhcHHHHHHHHHHHHHhcCCcchhHHHhhhccCCchhhHHHHHHHhhhc
Q 022396 155 KEKLISLARKVKKIDDEMESHYELLKEIQDSPTDINAVVARRRKDFTGEFFRYLSLVSETH 215 (298)
Q Consensus 155 K~kL~kL~RKLK~IDeevq~HneLL~ei~e~p~di~aIVArRRkDFT~EFF~hL~~l~ea~ 215 (298)
...++.++-+-|+=|+ +...+||+-+.+.=.+|++|=.++| +.+||.||..++|+.
T Consensus 41 qr~~L~~a~~~kKP~~--~~~~~ll~pl~~~i~~i~~~re~nR---~s~~fNHLsavsEgi 96 (176)
T d1s0pa_ 41 EKALINTASQSKKPSQ--ETLLELIKPLNNFAAEVGKIRDSNR---SSKFFNNLSAISESI 96 (176)
T ss_dssp HHHHHHHHHHEECCCH--HHHHHHTHHHHHHHHHHHHHHHTCT---TCTTHHHHHHHHTSG
T ss_pred HHHHHHHHHhcCCCCc--HHHHHHHHHHHHHHHHHHHHHHhcC---CCchhHHHHHHHHhc
Confidence 3467777777777764 4456666666655555555555555 558999999999998
No 2
>d1hcia4 a.7.1.1 (A:633-746) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}
Probab=51.68 E-value=20 Score=25.03 Aligned_cols=90 Identities=9% Similarity=0.056 Sum_probs=54.0
Q ss_pred hhhHhHHHHHHhhh---------hhccChHHHHHHHHHHHHhhhhcHHHHHHHHHHHHHhcCCcchhHHHhhhccCCchh
Q 022396 133 KYRESFYNRCRTRA---------DEESEPTMKEKLISLARKVKKIDDEMESHYELLKEIQDSPTDINAVVARRRKDFTGE 203 (298)
Q Consensus 133 ~iRp~Ff~RCq~RA---------d~E~DP~~K~kL~kL~RKLK~IDeevq~HneLL~ei~e~p~di~aIVArRRkDFT~E 203 (298)
.+|..|+..|.+-- -+..++..-..+-.+.++.+.+..+|..|..-++.|.+...++-. +.-|..+
T Consensus 5 ~L~~~F~~~a~~~~~Wi~e~~~~l~~~~~~~~~~ve~~l~~h~~~e~el~~~~~~i~~l~~~g~~L~~-----~~~~~~~ 79 (114)
T d1hcia4 5 RLRRQFAAQANAIGPWIQNKMEEIARSSIQITGALEDQMNQLKQYEHNIINYKNNIDKLEGDHQLIQE-----ALVFDNK 79 (114)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCSCTTTTSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----TTCCCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCchHH
Confidence 46667777665531 122333333456678889999999999999988888776655532 2223333
Q ss_pred hHHHHHHHhhhcCChhhhHHHHHHHHHHHHHHHhhh
Q 022396 204 FFRYLSLVSETHDSLEDCDAVARLATRCLSAVSAYD 239 (298)
Q Consensus 204 FF~hL~~l~ea~d~~~~rd~LArL~a~cLaaV~AYD 239 (298)
.. ..+.++|...+..+...+..=-
T Consensus 80 ~i------------~~~~~~L~~~W~~L~~~~~~R~ 103 (114)
T d1hcia4 80 HT------------NYTMEHIRVGWELLLTTIARTI 103 (114)
T ss_dssp TC------------SCHHHHHHHHHHHHHHHHHHHH
T ss_pred HH------------HHHHHHHHHHHHHHHHHHHHHH
Confidence 22 2445666666666666555433
No 3
>d1af7a1 a.58.1.1 (A:11-91) Chemotaxis receptor methyltransferase CheR, N-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=48.58 E-value=6.5 Score=26.92 Aligned_cols=62 Identities=11% Similarity=0.282 Sum_probs=42.1
Q ss_pred hhhhhhhhHhHHHHHHhhhhhccChHHHHHHHHHHHHhhhhcHHHHHHHHHHHHHhcCC--cchhHHHh
Q 022396 128 REDWNKYRESFYNRCRTRADEESEPTMKEKLISLARKVKKIDDEMESHYELLKEIQDSP--TDINAVVA 194 (298)
Q Consensus 128 S~EW~~iRp~Ff~RCq~RAd~E~DP~~K~kL~kL~RKLK~IDeevq~HneLL~ei~e~p--~di~aIVA 194 (298)
.+++..++.-++++|--.-+..-..-.+.+|.+..+++. + +.++.|.++| +.+| .+|+.+|.
T Consensus 14 d~~f~~~~~~i~~~~Gi~l~~~K~~~l~~RL~~rm~~~g-~-~s~~~Y~~~L---~~~~~~~e~~~li~ 77 (81)
T d1af7a1 14 DAHFRRICQLIYQRAGIVLADHKRDMVYNRLVRRLRALG-L-DDFGRYLSML---EANQNSAEWQAFIN 77 (81)
T ss_dssp HHHHHHHHHHHHHHHCCCCCGGGHHHHHHHHHHHHHHHT-C-CCHHHHHHHH---HHCTTCTHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHhC-C-CCHHHHHHHH---HhCCCHHHHHHHHH
Confidence 467889999999998888777777777777666666664 1 2344555555 4454 36777764
No 4
>d1mmsa1 a.4.7.1 (A:71-140) Ribosomal protein L11, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=33.57 E-value=17 Score=25.51 Aligned_cols=28 Identities=32% Similarity=0.393 Sum_probs=22.4
Q ss_pred hHHHHHHhhhhhhCCccHHHHHHHHHHHH
Q 022396 247 TLDSAQAKFDDILNSPSVDVACEKIKSLA 275 (298)
Q Consensus 247 ~LdaA~~kf~DILnSpSLDaAc~KId~LA 275 (298)
..+-|+.|.+| ||.-++++||+-|-.=|
T Consensus 35 v~eIAk~K~~d-l~~~~l~~a~k~v~GtA 62 (70)
T d1mmsa1 35 IEEIAKTKMPD-LNANSLEAAMKIIEGTA 62 (70)
T ss_dssp HHHHHHHHGGG-CCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHhcc-cCCCCHHHHHHHHHHhH
Confidence 45679999999 77778999999876544
No 5
>d1hc8a_ a.4.7.1 (A:) Ribosomal protein L11, C-terminal domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=30.52 E-value=26 Score=24.88 Aligned_cols=29 Identities=31% Similarity=0.433 Sum_probs=23.3
Q ss_pred hHHHHHHhhhhhhCCccHHHHHHHHHHHHH
Q 022396 247 TLDSAQAKFDDILNSPSVDVACEKIKSLAK 276 (298)
Q Consensus 247 ~LdaA~~kf~DILnSpSLDaAc~KId~LAk 276 (298)
..+-|+.|.+| ||..++++||+-|-.=|.
T Consensus 39 i~eIAk~K~~D-l~~~~l~~a~k~v~GtAr 67 (74)
T d1hc8a_ 39 VREIAELKMPD-LNAASIEAAMRMIEGTAR 67 (74)
T ss_dssp HHHHHHHSGGG-CCCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhh-cCCCCHHHHHHHHHhhHh
Confidence 45679999999 788889999998865443
No 6
>d1nzea_ a.24.18.1 (A:) Oxygen-evolving enhancer protein 3, {Spinach (Spinacia oleracea) [TaxId: 3562]}
Probab=28.42 E-value=57 Score=24.00 Aligned_cols=52 Identities=12% Similarity=0.215 Sum_probs=39.1
Q ss_pred HHHHHhhhcCChhhhHHHHHHHHHHHHHHHhhhhhhhhHHhHHHHHHhhhhhhC
Q 022396 207 YLSLVSETHDSLEDCDAVARLATRCLSAVSAYDKTLEHVETLDSAQAKFDDILN 260 (298)
Q Consensus 207 hL~~l~ea~d~~~~rd~LArL~a~cLaaV~AYD~ate~~e~LdaA~~kf~DILn 260 (298)
-|+.++.+ -.+++|.++.+|++.....++.-|.+....+ ...|+..|.+.+.
T Consensus 51 dl~~li~~-~~~~~k~~~~~la~~lf~~le~LD~Aar~kd-~~~a~~~Y~~t~~ 102 (112)
T d1nzea_ 51 DLKTVISA-KPKDEKKSLQELTSKLFSSIDNLDHAAKIKS-PTEAEKYYGQTVS 102 (112)
T ss_dssp HHHHHHHT-SCHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-HHHHHHHHHHHHH
T ss_pred HHHHHHHh-CCHhhhHHHHHHHHHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHH
Confidence 34445444 4677888899999999999999999988876 5667777766553
No 7
>d1ku9a_ a.4.5.36 (A:) DNA-binding protein Mj223 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=26.83 E-value=32 Score=24.60 Aligned_cols=84 Identities=10% Similarity=0.056 Sum_probs=48.1
Q ss_pred CchHHHHHHHHHHHHhhc-CCCccchhhhhcc-h--hhhhhhhHhH---HHHHH---hhhhhccChHHHHHHHHHHHHhh
Q 022396 97 GYTLTQFCDKIIDVFLNE-KPRVKQWRKYLVF-R--EDWNKYRESF---YNRCR---TRADEESEPTMKEKLISLARKVK 166 (298)
Q Consensus 97 g~tm~qvCDKLIdVFl~~-Kp~pkDWRkLLaF-S--~EW~~iRp~F---f~RCq---~RAd~E~DP~~K~kL~kL~RKLK 166 (298)
--++..++++|.+.=++. .+.|.|=|.+... . ++|..+...+ +++.. .......++..+..+....+++.
T Consensus 55 k~~vs~~l~~L~~~GlV~r~~~~~drr~~~~~~t~~g~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~l~~~~ 134 (151)
T d1ku9a_ 55 KGNVSMSLKKLEELGFVRKVWIKGERKNYYEAVDGFSSIKDIAKRKHDLIAKTYEDLKKLEEKCNEEEKEFIKQKIKGIE 134 (151)
T ss_dssp HHHHHHHHHHHHHTTSEEEECCTTCSSCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHCCCEEEEEcCCCCceeEEeCCHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 357888999999987775 3456666544332 2 3343333222 22222 22223334445677777777777
Q ss_pred hhcHHHHHHHHHHH
Q 022396 167 KIDDEMESHYELLK 180 (298)
Q Consensus 167 ~IDeevq~HneLL~ 180 (298)
++.+.+++..+.|.
T Consensus 135 ~~~~~~e~~~~~l~ 148 (151)
T d1ku9a_ 135 RMKKISEKILEALN 148 (151)
T ss_dssp HHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHH
Confidence 77777777666554
No 8
>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}
Probab=26.58 E-value=41 Score=28.25 Aligned_cols=88 Identities=19% Similarity=0.221 Sum_probs=54.9
Q ss_pred HHHHHHHHhhcCCCccchhhhhcchhhhhhhhHhHHHHHHhhhhhccChHHHHHHHHHHHHhhhhcHHHHHHHHHHHHHh
Q 022396 104 CDKIIDVFLNEKPRVKQWRKYLVFREDWNKYRESFYNRCRTRADEESEPTMKEKLISLARKVKKIDDEMESHYELLKEIQ 183 (298)
Q Consensus 104 CDKLIdVFl~~Kp~pkDWRkLLaFS~EW~~iRp~Ff~RCq~RAd~E~DP~~K~kL~kL~RKLK~IDeevq~HneLL~ei~ 183 (298)
|+..-++|-.-+.-|++|++.+ ..=|.+|+|. |-||.+ .+.+|++-+.|-..+-.+||-+..
T Consensus 58 ~~s~~~i~~~~~~~~e~~~~~~--~~l~~~y~p~-----------E~d~~~-----s~~ek~~~m~ew~~~~~~ll~~~~ 119 (291)
T d2bdua1 58 CPTCHNIIDNCKLVTDECRRKL--LQLKEQYYAI-----------EVDPVL-----TVEEKFPYMVEWYTKSHGLLIEQG 119 (291)
T ss_dssp CCCHHHHHHTSTTSCHHHHHHH--HHHHHHHHHH-----------HTCSSS-----CHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cchhHHHHhhCCCCCHHHHHHH--HHHHhhhccc-----------ccCCCC-----CHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3344456655556667776652 2444444443 444442 244666666677778888888777
Q ss_pred cCCcchhHHHhhhcc---CCchhhHHHHH
Q 022396 184 DSPTDINAVVARRRK---DFTGEFFRYLS 209 (298)
Q Consensus 184 e~p~di~aIVArRRk---DFT~EFF~hL~ 209 (298)
=.-.++..+|...+- +=..|||++|+
T Consensus 120 l~~~~i~~~v~~~~i~Lr~G~~e~~~~l~ 148 (291)
T d2bdua1 120 IPKAKLKEIVADSDVMLKEGYENFFGKLQ 148 (291)
T ss_dssp CBGGGHHHHHHHSCCCBCBTHHHHHHHHH
T ss_pred CCHHHHHHHHHhcCCCcccCHHHHHHHHH
Confidence 677799999988664 44467777765
No 9
>d1cqxa1 a.1.1.2 (A:1-150) Flavohemoglobin, N-terminal domain {Alcaligenes eutrophus [TaxId: 106590]}
Probab=24.99 E-value=41 Score=24.69 Aligned_cols=50 Identities=14% Similarity=0.129 Sum_probs=30.3
Q ss_pred HHHhhhccCCchhhHHHHHHHhhhc------CChhhhHHHHHHHHHHHHHHHhhhh
Q 022396 191 AVVARRRKDFTGEFFRYLSLVSETH------DSLEDCDAVARLATRCLSAVSAYDK 240 (298)
Q Consensus 191 aIVArRRkDFT~EFF~hL~~l~ea~------d~~~~rd~LArL~a~cLaaV~AYD~ 240 (298)
++|+.+..+|...||.+|--.--.+ ++++.+....++......+|+..|.
T Consensus 15 ~~~~~~~~~~~~~ff~rlF~~~P~~~~~F~~~~~~~~~h~~~~~~~l~~~V~~Ld~ 70 (150)
T d1cqxa1 15 PVLAEHGYDIIKCFYQRMFEAHPELKNVFNMAHQEQGQQQQALARAVYAYAENIED 70 (150)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHCGGGGGTSCCSCCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHhHHHHHHHHHHHHHHHCHhHHHHhhhhhhhhHHHHHHHHHHHHHHHHhccC
Confidence 4555566667777777765554444 4555556666666666666665554
No 10
>d1wy6a1 a.118.20.1 (A:7-167) Hypothetical protein ST1625 {Archaeon Sulfolobus tokodaii [TaxId: 111955]}
Probab=23.78 E-value=20 Score=29.16 Aligned_cols=111 Identities=20% Similarity=0.243 Sum_probs=56.7
Q ss_pred hcHHHHHHHHHHHHHhcCCc----ch--hHHHhhhccCCchhhHHHHHHHhhhcCChhhhHHHHHHHHHHHHHHHhhhhh
Q 022396 168 IDDEMESHYELLKEIQDSPT----DI--NAVVARRRKDFTGEFFRYLSLVSETHDSLEDCDAVARLATRCLSAVSAYDKT 241 (298)
Q Consensus 168 IDeevq~HneLL~ei~e~p~----di--~aIVArRRkDFT~EFF~hL~~l~ea~d~~~~rd~LArL~a~cLaaV~AYD~a 241 (298)
+|-.|++--+++.++-.+.. -| +.++..-.=| . -|+-|.-+-.- =|.+...-| =..|.-|=.+
T Consensus 14 ldG~ve~Gveii~k~~~ss~~~E~NW~ICNiidt~dC~--~-v~~~Ld~IG~~-FDls~C~Nl-------k~vv~C~~~~ 82 (161)
T d1wy6a1 14 LDGYIDEGVKIVLEITKSSTKSEYNWFICNLLESIDCR--Y-MFQVLDKIGSY-FDLDKCQNL-------KSVVECGVIN 82 (161)
T ss_dssp HTTCHHHHHHHHHHHHHHSCHHHHTHHHHHHHHHCCHH--H-HHHHHHHHGGG-SCGGGCSCT-------HHHHHHHHHT
T ss_pred HhhhHHhHHHHHHHHcccCCccccceeeeecccccchH--H-HHHHHHHHhhh-cCchhhhcH-------HHHHHHHHHh
Confidence 56778888888887765532 33 6666543211 1 12222111111 111111111 1134444444
Q ss_pred hhhHHhHHHHHHhhhhhhCCccHHHHHHHH-HHHHHhCCCChHHHHHHHHhhh
Q 022396 242 LEHVETLDSAQAKFDDILNSPSVDVACEKI-KSLAKAKELDSSLILLINGQRH 293 (298)
Q Consensus 242 te~~e~LdaA~~kf~DILnSpSLDaAc~KI-d~LAk~keLDsaLvLlisKAwa 293 (298)
-.+.+..|-|- |+|--.--.+.-+|| .+|+|++|+.|.++|-|+-||.
T Consensus 83 n~~se~vdlAL----d~lv~~~kkd~Ld~i~~~l~kn~~i~~~~llkia~A~k 131 (161)
T d1wy6a1 83 NTLNEHVNKAL----DILVIQGKRDKLEEIGREILKNNEVSASILVAIANALR 131 (161)
T ss_dssp TCCCHHHHHHH----HHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHH
T ss_pred cchHHHHHHHH----HHHHHhccHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 44555555442 233222244555566 6789999999999999999985
No 11
>d1x9ba_ a.10.2.1 (A:) Hypothetical membrane protein Ta0354, soluble domain {Thermoplasma acidophilum [TaxId: 2303]}
Probab=23.66 E-value=26 Score=23.84 Aligned_cols=24 Identities=38% Similarity=0.657 Sum_probs=19.9
Q ss_pred HHhhhhhhCCccHHHHHHHHHHHH
Q 022396 252 QAKFDDILNSPSVDVACEKIKSLA 275 (298)
Q Consensus 252 ~~kf~DILnSpSLDaAc~KId~LA 275 (298)
.++|...+||||--+..+-+++|-
T Consensus 6 r~kFEs~INS~SK~~FV~NL~ELE 29 (53)
T d1x9ba_ 6 RAKFESMINSPSKSVFVRNLNELE 29 (53)
T ss_dssp HHHHHHHHHSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCchHHHHHHhHHHHH
Confidence 579999999999888877777664
No 12
>d1i4da_ a.238.1.2 (A:) Arfaptin, Rac-binding fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.99 E-value=1.3e+02 Score=21.63 Aligned_cols=16 Identities=13% Similarity=0.148 Sum_probs=7.8
Q ss_pred cHHHHHHHHHHHHHhC
Q 022396 263 SVDVACEKIKSLAKAK 278 (298)
Q Consensus 263 SLDaAc~KId~LAk~k 278 (298)
.+|.+..|+..+.+++
T Consensus 116 dyd~~~~k~~~~~~~~ 131 (200)
T d1i4da_ 116 EYDAYRTDLEELSLGP 131 (200)
T ss_dssp HHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHhhcc
Confidence 3666666666654443
No 13
>d1urva_ a.1.1.2 (A:) Cytoglobin {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.26 E-value=1.1e+02 Score=22.22 Aligned_cols=70 Identities=14% Similarity=0.266 Sum_probs=36.1
Q ss_pred hhhhHhH--HHHHHhhhhhccChHHHHHHHHHHHHhhhh----cHHHHHHHHHHHHHhcCCcchhHHHhhh--ccCCchh
Q 022396 132 NKYRESF--YNRCRTRADEESEPTMKEKLISLARKVKKI----DDEMESHYELLKEIQDSPTDINAVVARR--RKDFTGE 203 (298)
Q Consensus 132 ~~iRp~F--f~RCq~RAd~E~DP~~K~kL~kL~RKLK~I----Deevq~HneLL~ei~e~p~di~aIVArR--RkDFT~E 203 (298)
|.+|+.| |+-.....+...+|..+.--.++...|..+ |+ .+....+| ..+..++ |-..+.+
T Consensus 37 P~~~~~F~~f~~~~~~~~l~~s~~~~~H~~~v~~~l~~~v~~ldd-~~~l~~~l----------~~lg~~H~~~~gv~~~ 105 (154)
T d1urva_ 37 PSAKQYFSQFKHMEDPLEMERSPQLRKHASRVMGALNTVVENLHD-PDKVSSVL----------ALVGKAHALKHKVEPV 105 (154)
T ss_dssp GGGGGGCTTTTTCCCHHHHHHCHHHHHHHHHHHHHHHHHHHTTTS-HHHHHHHH----------HHHHHHHHHTSCCCTH
T ss_pred hHHHHHHHHhcCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHccCC-HHHHHHHH----------HHHHhhCcccCCCCHH
Confidence 4455555 333334445556666655544444444322 21 22233333 3345555 4599999
Q ss_pred hHHHHHHHh
Q 022396 204 FFRYLSLVS 212 (298)
Q Consensus 204 FF~hL~~l~ 212 (298)
.|..+.-.+
T Consensus 106 ~f~~~~~~l 114 (154)
T d1urva_ 106 YFKILSGVI 114 (154)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 998776543
No 14
>d2fmpa1 a.60.6.1 (A:10-91) DNA polymerase beta, N-terminal (8 kD)-domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.67 E-value=14 Score=25.86 Aligned_cols=17 Identities=24% Similarity=0.282 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHhCCCC
Q 022396 265 DVACEKIKSLAKAKELD 281 (298)
Q Consensus 265 DaAc~KId~LAk~keLD 281 (298)
+....||+++.+.|++.
T Consensus 58 k~ia~kI~E~~~TG~~~ 74 (82)
T d2fmpa1 58 TKIAEKIDEFLATGKLR 74 (82)
T ss_dssp HHHHHHHHHHHHHSSCH
T ss_pred HHHHHHHHHHHHhCChH
Confidence 67889999999999874
No 15
>d1zpya1 a.25.1.5 (A:4-94) Hypothetical protein NE0167 {Nitrosomonas europaea [TaxId: 915]}
Probab=21.67 E-value=60 Score=23.92 Aligned_cols=44 Identities=20% Similarity=0.213 Sum_probs=35.3
Q ss_pred HhhhhhccChHHHHHHHHHHHHhhhhcHHHHHHHHHHHHHhcCCcchhHH
Q 022396 143 RTRADEESEPTMKEKLISLARKVKKIDDEMESHYELLKEIQDSPTDINAV 192 (298)
Q Consensus 143 q~RAd~E~DP~~K~kL~kL~RKLK~IDeevq~HneLL~ei~e~p~di~aI 192 (298)
+.+|+..+||..|.=|.-.+ |||.+...++|+-++..+.+++.-
T Consensus 35 ~q~a~~t~d~~~k~Vl~hia------~EEkeH~g~~LelLrr~Dp~~~~~ 78 (91)
T d1zpya1 35 NQRVNACKDKELKAILAHNR------DEEKEHAAMLLEWIRRCDPAFDKE 78 (91)
T ss_dssp HHHHHHCCCHHHHHHHHHHH------HHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHH------HHHHHHHHHHHHHHHHHCHHHHHH
Confidence 57899999999887765544 789999999999999887666543
No 16
>d2dn3b1 a.1.1.2 (B:2-146) Hemoglobin, beta-chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.54 E-value=71 Score=23.34 Aligned_cols=73 Identities=11% Similarity=0.068 Sum_probs=40.2
Q ss_pred hhhhhhHhHHH--HHHhhhhhccChHHHHHHHHHHHHhhhhcHHHHHHHHHHHHHhcCCcchhHHHhhhccCCchhhHHH
Q 022396 130 DWNKYRESFYN--RCRTRADEESEPTMKEKLISLARKVKKIDDEMESHYELLKEIQDSPTDINAVVARRRKDFTGEFFRY 207 (298)
Q Consensus 130 EW~~iRp~Ff~--RCq~RAd~E~DP~~K~kL~kL~RKLK~IDeevq~HneLL~ei~e~p~di~aIVArRRkDFT~EFF~h 207 (298)
.=|.+|+.|.. ........+.+|..+.--.++...+-.+=+.+....+++..+.. +-.++| -=+.+.|+.
T Consensus 33 ~~P~~~~~F~~f~~~~~~~~~~~~~~~~~H~~~v~~al~~~V~~Ldd~~~l~~~L~~-------l~~~h~-gv~~~~f~~ 104 (145)
T d2dn3b1 33 VYPWTQRFFESFGDLSTPDAVMGNPKVKAHGKKVLGAFSDGLAHLDNLKGTFATLSE-------LHCDKL-HVDPENFRL 104 (145)
T ss_dssp HSGGGGGGCGGGCCCSSHHHHHTCHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHH-------HHHTTT-CCCTHHHHH
T ss_pred hCccHHHHhccccCCCcHHHhccCHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHH-------hccccc-CCChhHHHH
Confidence 34566666642 22233445678888877666666655444444444455554433 223334 367888877
Q ss_pred HHH
Q 022396 208 LSL 210 (298)
Q Consensus 208 L~~ 210 (298)
+.-
T Consensus 105 ~~~ 107 (145)
T d2dn3b1 105 LGN 107 (145)
T ss_dssp HHH
T ss_pred HHH
Confidence 763
No 17
>d2efka1 a.238.1.4 (A:10-288) CDC42-interacting protein 4, CIP4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.84 E-value=48 Score=25.29 Aligned_cols=72 Identities=8% Similarity=0.133 Sum_probs=51.0
Q ss_pred hhhhhHhHHHHHHhhhhhccChHHHHHHHHHHHHhhhhcHHHHHH-HHHHHHHhcC-C-cchhHHHhhhccCCchh
Q 022396 131 WNKYRESFYNRCRTRADEESEPTMKEKLISLARKVKKIDDEMESH-YELLKEIQDS-P-TDINAVVARRRKDFTGE 203 (298)
Q Consensus 131 W~~iRp~Ff~RCq~RAd~E~DP~~K~kL~kL~RKLK~IDeevq~H-neLL~ei~e~-p-~di~aIVArRRkDFT~E 203 (298)
|.+--|.+++++++. +.+-...++.-|.+.+.-...+...++.+ ..+-..+..- | .|+..+|.+.+..|+.+
T Consensus 196 ~~~~~p~~l~~lq~~-e~~r~~~lk~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~id~~~D~~~f~~~~~t~~~~p 270 (279)
T d2efka1 196 YFSQMPQIFDKLQDM-DERRATRLGAGYGLLSEAELEVVPIIAKCLEGMKVAANAVDPKNDSHVLIELHKSGFARP 270 (279)
T ss_dssp HHTHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHTGGGCCCC
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHCChHHHHHHHHHHcCCCCCCC
Confidence 556668888888654 55556667777888888777777777664 4555555544 3 49999999988877654
No 18
>d1xbpg1 a.4.7.1 (G:72-143) Ribosomal protein L11, C-terminal domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=20.69 E-value=39 Score=23.54 Aligned_cols=29 Identities=34% Similarity=0.503 Sum_probs=22.9
Q ss_pred HhHHHHHHhhhhhhCCccHHHHHHHHHHHH
Q 022396 246 ETLDSAQAKFDDILNSPSVDVACEKIKSLA 275 (298)
Q Consensus 246 e~LdaA~~kf~DILnSpSLDaAc~KId~LA 275 (298)
+..+-|+.|-.| ||..+++++|+-|-.=|
T Consensus 32 ~i~eIAk~K~~d-l~~~~l~~~~k~V~GTa 60 (72)
T d1xbpg1 32 QVLEIAKTKMPD-LNAGSVEAAANTVAGTA 60 (72)
T ss_pred HHHHHHHHHHHh-cCCCCHHHHHHHHHhhh
Confidence 446789999999 77778999999875433
Done!