Query 022400
Match_columns 298
No_of_seqs 150 out of 369
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 04:52:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022400.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022400hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xfi_A Unknown protein; struct 100.0 2.8E-58 9.5E-63 442.8 26.9 269 2-270 2-270 (367)
2 2g8l_A 287AA long hypothetical 100.0 1.7E-42 5.8E-47 325.1 13.2 213 44-282 11-227 (299)
3 2ffj_A Conserved hypothetical 100.0 1.9E-41 6.4E-46 318.1 15.4 211 44-273 11-224 (300)
4 3pt1_A UPF0364 protein YMR027W 99.8 8.2E-20 2.8E-24 179.9 13.8 167 102-271 110-308 (471)
5 3sho_A Transcriptional regulat 68.9 36 0.0012 27.6 9.8 95 150-250 27-123 (187)
6 3tsa_A SPNG, NDP-rhamnosyltran 67.0 4.4 0.00015 36.8 4.0 35 214-249 3-37 (391)
7 3oti_A CALG3; calicheamicin, T 66.3 5.2 0.00018 36.6 4.3 36 213-249 21-56 (398)
8 4fzr_A SSFS6; structural genom 62.2 6.9 0.00024 35.7 4.3 37 213-250 16-52 (398)
9 2gq0_A Chaperone protein HTPG; 59.5 25 0.00087 32.4 7.6 47 199-248 187-233 (303)
10 3etn_A Putative phosphosugar i 58.3 26 0.00089 29.9 7.2 95 150-250 42-144 (220)
11 3h4t_A Glycosyltransferase GTF 58.2 5.9 0.0002 36.7 3.1 36 214-250 2-37 (404)
12 4amg_A Snogd; transferase, pol 55.4 11 0.00036 34.1 4.3 36 213-249 23-58 (400)
13 3pry_A Heat shock protein HSP 55.1 91 0.0031 28.1 10.4 47 199-248 186-232 (268)
14 3ia7_A CALG4; glycosysltransfe 54.9 9.3 0.00032 34.4 3.8 36 213-249 5-40 (402)
15 3fxa_A SIS domain protein; str 53.8 45 0.0015 27.5 7.7 95 150-250 32-128 (201)
16 1hk7_A Heat shock protein HSP8 53.6 64 0.0022 29.5 9.2 47 199-248 184-230 (288)
17 2g1u_A Hypothetical protein TM 52.7 18 0.00062 28.6 4.9 34 212-251 19-52 (155)
18 3gpi_A NAD-dependent epimerase 52.5 11 0.00037 32.8 3.7 34 213-252 4-37 (286)
19 2p6p_A Glycosyl transferase; X 49.1 13 0.00044 33.6 3.8 36 214-250 2-37 (384)
20 3hjc_A Heat shock protein 83-1 48.5 88 0.003 30.3 9.7 47 199-248 202-248 (444)
21 1usu_A Heat shock protein HSP8 46.6 65 0.0022 29.0 7.9 47 199-248 186-232 (260)
22 3otg_A CALG1; calicheamicin, T 46.5 18 0.00062 32.7 4.4 38 212-250 20-57 (412)
23 3ius_A Uncharacterized conserv 46.4 15 0.0005 31.7 3.6 34 213-252 6-39 (286)
24 2xhz_A KDSD, YRBH, arabinose 5 46.0 75 0.0026 25.5 7.8 94 151-250 37-132 (183)
25 3rsc_A CALG2; TDP, enediyne, s 46.0 19 0.00064 32.8 4.4 37 213-250 21-57 (415)
26 2fcj_A Small toprim domain pro 44.1 41 0.0014 26.7 5.5 53 212-269 50-104 (119)
27 2nm0_A Probable 3-oxacyl-(acyl 43.7 54 0.0018 28.2 6.9 53 213-270 22-82 (253)
28 1id1_A Putative potassium chan 42.2 22 0.00074 28.0 3.7 33 212-250 3-35 (153)
29 2yjn_A ERYCIII, glycosyltransf 41.7 22 0.00074 33.0 4.2 39 212-251 20-58 (441)
30 1y6z_A Heat shock protein, put 39.3 56 0.0019 29.4 6.3 47 199-248 189-235 (263)
31 1rrv_A Glycosyltransferase GTF 38.1 24 0.00081 32.4 3.8 36 214-250 2-37 (416)
32 1dhr_A Dihydropteridine reduct 37.9 66 0.0023 27.0 6.4 53 212-269 7-68 (241)
33 1iir_A Glycosyltransferase GTF 34.6 28 0.00097 31.9 3.7 37 214-251 2-38 (415)
34 1f0k_A MURG, UDP-N-acetylgluco 34.3 35 0.0012 30.1 4.2 39 213-252 7-45 (364)
35 2iyf_A OLED, oleandomycin glyc 33.1 38 0.0013 30.9 4.3 38 213-251 8-45 (430)
36 3phh_A Shikimate dehydrogenase 32.8 47 0.0016 29.8 4.7 46 200-251 106-151 (269)
37 2iya_A OLEI, oleandomycin glyc 31.9 35 0.0012 31.2 3.8 37 213-250 13-49 (424)
38 2hmt_A YUAA protein; RCK, KTN, 31.6 29 0.00099 26.2 2.8 32 213-250 7-38 (144)
39 1q1r_A Putidaredoxin reductase 31.6 65 0.0022 30.0 5.7 58 198-263 137-194 (431)
40 5nul_A Flavodoxin; electron tr 31.5 1.7E+02 0.0057 22.1 8.2 66 200-271 66-137 (138)
41 2cge_A ATP-dependent molecular 31.0 1.4E+02 0.0047 28.4 7.9 44 200-246 185-228 (405)
42 1hdo_A Biliverdin IX beta redu 30.8 44 0.0015 26.7 3.9 35 213-252 4-38 (206)
43 1xm5_A Hypothetical UPF0054 pr 30.5 77 0.0026 26.1 5.3 67 51-124 88-154 (155)
44 1ooe_A Dihydropteridine reduct 29.2 1.3E+02 0.0046 24.9 6.9 52 213-269 4-64 (236)
45 3klj_A NAD(FAD)-dependent dehy 29.1 54 0.0018 30.2 4.6 58 197-262 133-190 (385)
46 3q6m_A Heat shock protein HSP 29.0 2.1E+02 0.0073 27.6 8.9 47 199-248 186-232 (448)
47 1jil_A Tyrrs, tyrosyl-tRNA syn 28.8 2.1E+02 0.0071 27.2 8.8 71 197-269 18-103 (420)
48 1lss_A TRK system potassium up 28.7 61 0.0021 24.2 4.2 32 213-250 5-36 (140)
49 2o23_A HADH2 protein; HSD17B10 28.6 1.1E+02 0.0038 25.7 6.3 35 213-252 13-47 (265)
50 1psw_A ADP-heptose LPS heptosy 28.2 38 0.0013 30.0 3.3 35 214-250 2-39 (348)
51 3h7a_A Short chain dehydrogena 28.0 1.2E+02 0.0041 25.8 6.4 35 213-252 8-42 (252)
52 3uce_A Dehydrogenase; rossmann 27.7 57 0.0019 27.1 4.2 50 214-269 7-57 (223)
53 1edz_A 5,10-methylenetetrahydr 27.7 61 0.0021 29.9 4.7 34 212-250 177-210 (320)
54 3fwz_A Inner membrane protein 27.4 49 0.0017 25.6 3.5 32 213-250 8-39 (140)
55 2gt1_A Lipopolysaccharide hept 27.3 30 0.001 30.6 2.5 36 214-251 2-40 (326)
56 1uzm_A 3-oxoacyl-[acyl-carrier 27.3 1.1E+02 0.0039 25.7 6.2 52 213-269 16-75 (247)
57 3s2u_A UDP-N-acetylglucosamine 26.9 58 0.002 29.6 4.4 37 213-250 3-39 (365)
58 3llv_A Exopolyphosphatase-rela 26.8 49 0.0017 25.3 3.3 32 213-250 7-38 (141)
59 1uls_A Putative 3-oxoacyl-acyl 26.2 74 0.0025 26.9 4.7 52 213-269 6-71 (245)
60 2dkn_A 3-alpha-hydroxysteroid 25.9 61 0.0021 26.9 4.0 35 214-253 3-37 (255)
61 4b4o_A Epimerase family protei 25.9 67 0.0023 27.7 4.5 40 218-262 5-44 (298)
62 1ydm_A Hypothetical protein YQ 25.7 60 0.002 27.1 3.9 33 212-247 41-73 (187)
63 2ts1_A Tyrosyl-tRNA synthetase 25.6 2.5E+02 0.0085 26.7 8.7 69 197-267 16-99 (419)
64 2fwm_X 2,3-dihydro-2,3-dihydro 25.5 1.3E+02 0.0046 25.3 6.3 52 213-269 8-68 (250)
65 3un1_A Probable oxidoreductase 25.1 1.6E+02 0.0055 25.1 6.8 53 213-270 29-91 (260)
66 3hy3_A 5-formyltetrahydrofolat 25.0 59 0.002 27.5 3.8 33 212-247 49-81 (203)
67 2ioq_A Chaperone protein HTPG; 24.9 1.6E+02 0.0055 29.7 7.5 46 199-247 415-460 (624)
68 2dtx_A Glucose 1-dehydrogenase 24.9 1.3E+02 0.0044 25.7 6.1 52 213-269 9-68 (264)
69 1xax_A Hypothetical UPF0054 pr 24.5 86 0.0029 25.8 4.6 67 51-124 88-154 (154)
70 3o26_A Salutaridine reductase; 24.5 52 0.0018 28.4 3.4 34 213-251 13-46 (311)
71 3tpc_A Short chain alcohol deh 24.5 1.6E+02 0.0054 24.8 6.6 35 213-252 8-42 (257)
72 1m3s_A Hypothetical protein YC 24.4 2.7E+02 0.0091 22.1 8.8 90 150-250 25-115 (186)
73 1qsg_A Enoyl-[acyl-carrier-pro 24.3 1.4E+02 0.005 25.2 6.3 35 213-251 10-45 (265)
74 3h11_A CAsp8 and FADD-like apo 24.2 94 0.0032 27.8 5.1 68 212-290 42-119 (272)
75 3ic5_A Putative saccharopine d 24.0 62 0.0021 23.3 3.3 34 212-251 5-39 (118)
76 3l6e_A Oxidoreductase, short-c 23.9 88 0.003 26.3 4.7 34 213-251 4-37 (235)
77 1vim_A Hypothetical protein AF 23.9 3E+02 0.01 22.5 8.5 37 212-250 89-125 (200)
78 3kd9_A Coenzyme A disulfide re 23.5 2E+02 0.007 26.5 7.6 61 198-264 134-194 (449)
79 3e03_A Short chain dehydrogena 23.2 1.3E+02 0.0044 25.9 5.8 35 213-252 7-41 (274)
80 1hdc_A 3-alpha, 20 beta-hydrox 22.9 88 0.003 26.6 4.6 34 213-251 6-39 (254)
81 3fro_A GLGA glycogen synthase; 22.9 95 0.0033 27.7 5.0 39 213-252 3-46 (439)
82 1fjh_A 3alpha-hydroxysteroid d 22.9 74 0.0025 26.7 4.0 37 213-254 2-38 (257)
83 3flh_A Uncharacterized protein 22.8 1.3E+02 0.0045 22.7 5.2 49 200-251 58-106 (124)
84 1uay_A Type II 3-hydroxyacyl-C 22.5 1.4E+02 0.0049 24.4 5.7 52 213-269 3-61 (242)
85 2jsx_A Protein NAPD; TAT, proo 22.2 1E+02 0.0035 23.2 4.2 63 233-295 22-89 (95)
86 1sbq_A H91_ORF164, 5,10-methen 22.0 80 0.0027 26.6 4.0 33 212-247 68-101 (189)
87 2jcb_A 5-formyltetrahydrofolat 21.9 74 0.0025 27.0 3.8 33 212-247 52-84 (200)
88 3afn_B Carbonyl reductase; alp 21.8 1.6E+02 0.0054 24.4 5.9 33 213-250 8-40 (258)
89 3nrc_A Enoyl-[acyl-carrier-pro 21.8 1.6E+02 0.0053 25.4 6.0 35 212-251 26-62 (280)
90 3ce9_A Glycerol dehydrogenase; 21.7 1.3E+02 0.0045 27.3 5.7 58 201-265 23-81 (354)
91 3r1i_A Short-chain type dehydr 21.6 1.8E+02 0.006 25.2 6.4 35 213-252 33-67 (276)
92 3c48_A Predicted glycosyltrans 21.5 90 0.0031 28.2 4.5 38 212-251 20-69 (438)
93 3c85_A Putative glutathione-re 21.4 59 0.002 26.1 3.0 33 212-250 39-72 (183)
94 2gqw_A Ferredoxin reductase; f 21.4 1.3E+02 0.0046 27.5 5.8 50 199-256 134-183 (408)
95 1pyo_A Caspase-2; apoptosis, c 21.3 78 0.0027 26.2 3.7 76 212-294 32-127 (167)
96 2yxn_A Tyrosyl-tRNA synthetase 20.8 3.5E+02 0.012 24.5 8.4 75 197-272 19-111 (322)
97 3zv4_A CIS-2,3-dihydrobiphenyl 20.8 1E+02 0.0034 26.8 4.6 53 213-270 6-74 (281)
98 3vtz_A Glucose 1-dehydrogenase 20.7 1.9E+02 0.0064 24.8 6.3 54 212-270 14-76 (269)
99 2wsb_A Galactitol dehydrogenas 20.7 1.7E+02 0.006 24.2 6.0 34 213-251 12-45 (254)
100 3ef6_A Toluene 1,2-dioxygenase 20.6 1E+02 0.0035 28.3 4.8 51 197-255 130-180 (410)
101 3sju_A Keto reductase; short-c 20.5 1.2E+02 0.0039 26.3 4.9 35 212-251 24-58 (279)
102 3p19_A BFPVVD8, putative blue 20.4 1.1E+02 0.0036 26.4 4.6 53 213-270 17-82 (266)
103 2v3a_A Rubredoxin reductase; a 20.4 2.9E+02 0.0099 24.7 7.8 56 201-264 136-191 (384)
104 1o5i_A 3-oxoacyl-(acyl carrier 20.3 92 0.0031 26.4 4.1 35 212-251 19-53 (249)
105 2d1y_A Hypothetical protein TT 20.1 1.8E+02 0.0062 24.5 6.0 34 213-251 7-40 (256)
106 3ntd_A FAD-dependent pyridine 20.1 2.3E+02 0.0079 26.9 7.4 50 200-255 139-188 (565)
No 1
>1xfi_A Unknown protein; structural genomics, protein structure initiative, CESG, AT2G17340, center for eukaryotic structural genomics; 1.70A {Arabidopsis thaliana} SCOP: e.50.1.1 PDB: 2q40_A
Probab=100.00 E-value=2.8e-58 Score=442.83 Aligned_cols=269 Identities=81% Similarity=1.307 Sum_probs=233.7
Q ss_pred CCCCCCcCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCcchhhHHHhhhccHHHHHHHhhcCCCCCCHHHHHHHHHHHHH
Q 022400 2 ESESELVPFPLLPTPIETNYRACTIPYRFPTDNPKKPTRTEIAWLDLFLNSIPSFKKRAESDPTVPDAHVRAEKFAQRYS 81 (298)
Q Consensus 2 ~~~~~~~~~pll~~~~~~~y~p~t~d~~~~~~~~~~~~~~~~~w~~~~~~Ci~C~~~qa~~~~~~~~~~~~~~~~~~~~~ 81 (298)
+|++++++||||.||.+.+|.|||+||.+++++.++.++++.||++||.++++.|.++|......+++.+|+++|.++|.
T Consensus 2 ~~~~~~~~~pll~~~~~~~y~p~t~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~a~~~~~~~~a~~ra~~f~~~~~ 81 (367)
T 1xfi_A 2 ESDSEMVPFPQLPMPIENNYRACTIPYRFPSDDPKKATPNEISWINVFANSIPSFKKRAESDITVPDAPARAEKFAERYA 81 (367)
T ss_dssp ----CCBCCTTSCSCCTTTCCSBCSCCCCTTSCTTSCCHHHHHHHHHHHTTHHHHHHHHHTCTTSTTHHHHHHHHHHHHH
T ss_pred CCccccccCcccCCccccCCCCCccCCCCCcccccccHHHHHHHHHHHHHhhHHHHHHhccCCCCccHHHHHHHHHHHHH
Confidence 57889999999999944499999999999988888878999999999999999999999977877899999999999999
Q ss_pred HHHHhccCCCCCCCCChhHhHHHHHHHHHHHHcCCccchHHHHHHHHHHHHHHHHHHHHHhhhhhhchHHHHHHHHHHHH
Q 022400 82 EILEDMKKDPETHGGPPDCILLCRLREQVLRELGFRDIFKKVKDEENAKAISLFGDVVRLNDVIEDEGKRVESLIRGIFA 161 (298)
Q Consensus 82 ~~L~~l~~~p~~~~~~~~~r~~~~~~~~~~~~~g~~DPY~~~K~~~N~~Al~~~~~l~~~ld~~~~~~d~l~~a~r~ala 161 (298)
++|..+.++|.+||.|+.+|+++++++++++++|+.|||+++|+++|+.|+++++.+.+.+++++.+.++|.+++|+++|
T Consensus 82 ~~l~~l~~~p~~~g~~~~~r~~~~~~~~il~~~g~~DPf~~~K~~~n~~al~~l~~l~~~l~~~~~~~~~l~~llr~al~ 161 (367)
T 1xfi_A 82 GILEDLKKDPESHGGPPDGILLCRLREQVLRELGFRDIFKKVKDEENAKAISLFPQVVSLSDAIEDDGKRLENLVRGIFA 161 (367)
T ss_dssp HHHHHHHHCTTGGGCSCCHHHHHHHHHHHHHHTTCSCTTHHHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHhhCccccCCcchHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHH
Confidence 99999999999999965569999999999999999999999999999999999999999998766567899999999999
Q ss_pred hhhhhhchhhhhhhhccCcccHHHHHhhhcCCCCCCCCHHHHHHHhcccCCCeEEEEecCCCcchhcchHHHHHHHHhCC
Q 022400 162 GNIFDLGSAQLAEVFSKDGMSFLASCQNLVPRPWVIDDLETFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLRRG 241 (298)
Q Consensus 162 GN~iD~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~~~~~~~L~~~~~k~ilyl~DNaGEdiVfD~lpli~~L~~~g 241 (298)
||++|||+....+.+++++++++++++++.+++|.+||+++|.++|.+.++++|+||+||||+|+|||+||||++|+++|
T Consensus 162 GN~~Dlg~~~~~~~~~~~~~~~~~~~~~~~~~~~lvdd~~~l~~~L~~~~~k~Vl~v~DNAG~Eiv~D~L~La~~Ll~~g 241 (367)
T 1xfi_A 162 GNIFDLGSAQLAEVFSRDGMSFLASCQNLVPRPWVIDDLENFQAKWINKSWKKAVIFVDNSGADIILGILPFARELLRRG 241 (367)
T ss_dssp HHHC---------------CCHHHHTTCSCCSSCSEECHHHHHHHHTTTCCCEEEEECCBTTHHHHHTHHHHHHHHHHTT
T ss_pred HhccccccccccccccccCCCHHHHHHHhhccCCCcCCHHHHHHHhcccCCCEEEEEecCCCchhhccHHHHHHHHHHcC
Confidence 99999998664333333357889999998899999999999999998755799999999999669999767999999999
Q ss_pred CEEEEEecCCCccccCCHHHHHHHHHHHh
Q 022400 242 TQVILAANDLPSINDVTYPELIEIMSKVT 270 (298)
Q Consensus 242 ~~V~lavk~~PilNDaT~~Da~~~l~~~a 270 (298)
++|+++||++|++||||++|+...|++++
T Consensus 242 ~kVvl~vK~~P~vnDvT~~D~~~~L~~l~ 270 (367)
T 1xfi_A 242 AQVVLAANELPSINDITCTELTEILSQLK 270 (367)
T ss_dssp CEEEEEEBSSCCTTBCBHHHHHHHHHHHC
T ss_pred CEEEEEECCcCceeeCCHHHHHHHHHHHH
Confidence 99999999999999999999999888874
No 2
>2g8l_A 287AA long hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.04A {Pyrococcus horikoshii} SCOP: e.50.1.1
Probab=100.00 E-value=1.7e-42 Score=325.06 Aligned_cols=213 Identities=15% Similarity=0.156 Sum_probs=182.5
Q ss_pred hHHHhhhccHHHHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHh-ccCCCCCCCCChhHhHHHHHHHHHHHHcCCccchH
Q 022400 44 AWLDLFLNSIPSFKKRAESDP-TVPDAHVRAEKFAQRYSEILED-MKKDPETHGGPPDCILLCRLREQVLRELGFRDIFK 121 (298)
Q Consensus 44 ~w~~~~~~Ci~C~~~qa~~~~-~~~~~~~~~~~~~~~~~~~L~~-l~~~p~~~~~~~~~r~~~~~~~~~~~~~g~~DPY~ 121 (298)
--|++..+|++|+++|+.+.. ..+.+++.+.++++.+...+.+ ++ ...+|| ++++++++++++.+|+.|||+
T Consensus 11 ~~mk~~~~C~~C~~~q~~~~~~~~~~d~~~~~~i~~~~~~~l~~~~~----~~~~p~--~~~~~l~r~i~~~~g~~DPy~ 84 (299)
T 2g8l_A 11 HHMKVQYECLTCMANQCQRIVEMATQDMDIRRRAMILAAKLLAKEYN----ENAIPA--IAGSLIFLELYKFLGNDDPFI 84 (299)
T ss_dssp --CCCCTTHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHSS----TTCCHH--HHHHHHHHHHHHHHTCSCTTH
T ss_pred hccCCChhhHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhcC----CCCCcH--HHHHHHHHHHHHHcCCCCChH
Confidence 478999999999999998766 4455677788888888888876 54 234555 599999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhchHHHHHHHHHHHHhhhhhhchhhhhhhhccCcccHHHHHhhhcCCCCCCCCHH
Q 022400 122 KVKDEENAKAISLFGDVVRLNDVIEDEGKRVESLIRGIFAGNIFDLGSAQLAEVFSKDGMSFLASCQNLVPRPWVIDDLE 201 (298)
Q Consensus 122 ~~K~~~N~~Al~~~~~l~~~ld~~~~~~d~l~~a~r~alaGN~iD~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~~ 201 (298)
++|+++|+.|+++++.+++.+ .++|.+++++++|||++|||+... ++++++.+++.++++|.+||++
T Consensus 85 ~~K~~~n~~al~~~~~~~~~l------~d~l~~~l~~sl~GN~~D~g~~~~-------~~d~~~~~~~~~~~~~~~dd~~ 151 (299)
T 2g8l_A 85 EYKLKSEEMARKVADIIKRKL------KLDFELAVKLAIIGNVIDFSVGFS-------PEDLEEEVEKMLKDKLYIDDSK 151 (299)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC------CCCHHHHHHHHHHHHHCCTTSCSC-------HHHHHHHHHHHHTSCCSEECHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHhhccccC-------CCCHHHHHHHHhhcCCCcccHH
Confidence 999999999999999988776 357999999999999999997431 3567788888889999999999
Q ss_pred HHHHHhcccCCCeEEEEecCCCcchhcchHHHHHHHHh-CCCEEEEEecCCCccccCCHHHHHH-HHHHHhhhhhhhhhc
Q 022400 202 TFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLR-RGTQVILAANDLPSINDVTYPELIE-IMSKVTENMKIKSKS 279 (298)
Q Consensus 202 ~~~~~L~~~~~k~ilyl~DNaGEdiVfD~lpli~~L~~-~g~~V~lavk~~PilNDaT~~Da~~-~l~~~a~v~~il~~~ 279 (298)
+|.+.|.+ +++|+||+||||| +|||++ |+++|++ +|++|+++||++|++||||++|+.. ++++++ .+++++
T Consensus 152 ~l~~~l~~--~~~v~~v~DNaGE-iv~Dl~-l~~~Ll~~~g~~V~~~vK~~P~vnDvT~~D~~~~~~~~~~---~vi~~G 224 (299)
T 2g8l_A 152 ELFEEVKR--AENILYITDNVGE-HYFDAI-LIEKIREISNAEVYIAGKEGPIINDATVEDLKRAGLEKLG---KVISTG 224 (299)
T ss_dssp HHHHHHHH--CSEEEEECCBTTH-HHHHHH-HHHHHHHHCCCEEEEEEBSSCCTTBCBHHHHHHTTGGGTS---EEEECS
T ss_pred HHHHHhcc--CCEEEEEecCCcc-HHHhHH-HHHHHHHhcCCeEEEEECCcCceeeCCHHHHHHcCcchhh---hhhcCC
Confidence 99999987 8999999999997 999996 9999999 9999999999999999999999999 877654 444445
Q ss_pred ccc
Q 022400 280 YNY 282 (298)
Q Consensus 280 ~~~ 282 (298)
-..
T Consensus 225 ~~~ 227 (299)
T 2g8l_A 225 TRI 227 (299)
T ss_dssp SSS
T ss_pred CCC
Confidence 443
No 3
>2ffj_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.45A {Archaeoglobus fulgidus} SCOP: e.50.1.1
Probab=100.00 E-value=1.9e-41 Score=318.15 Aligned_cols=211 Identities=20% Similarity=0.229 Sum_probs=169.3
Q ss_pred hHHHhhhccHHHHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHh-ccCCCCCCCCChhHhHHHHHHHHHHHHcCCccchH
Q 022400 44 AWLDLFLNSIPSFKKRAESDP-TVPDAHVRAEKFAQRYSEILED-MKKDPETHGGPPDCILLCRLREQVLRELGFRDIFK 121 (298)
Q Consensus 44 ~w~~~~~~Ci~C~~~qa~~~~-~~~~~~~~~~~~~~~~~~~L~~-l~~~p~~~~~~~~~r~~~~~~~~~~~~~g~~DPY~ 121 (298)
--|++..+|++|+++|+.+.. ..+.+++.+.++++.+...+.+ ++ ...+|| ++++.+|+++++.+|+.|||+
T Consensus 11 ~~m~~~~~C~~C~~~q~~~~~~~~~~d~~~~~~i~~~~~~~l~~~~~----~~~~p~--~~~~~lyr~i~~~~g~~Dpf~ 84 (300)
T 2ffj_A 11 HHMKISPLCPSCLLGRVYYEAKLVTDDEDLISQCVDESLKILAENYS----SRPINA--HLATRIHRRVYEILGVEDPYA 84 (300)
T ss_dssp ---------CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC---------CCH--HHHHHHHHHHHHHHTCSCTTH
T ss_pred hcCCCCcchHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhcC----CCCCcH--HHHHHHHHHHHHHcCCCCchH
Confidence 479999999999999998766 4456677788888888888876 43 244555 499999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhchHHHHHHHHHHHHhhhhhhchhhhhhhhccCcccHHHHHhhhcCCCCCCCCHH
Q 022400 122 KVKDEENAKAISLFGDVVRLNDVIEDEGKRVESLIRGIFAGNIFDLGSAQLAEVFSKDGMSFLASCQNLVPRPWVIDDLE 201 (298)
Q Consensus 122 ~~K~~~N~~Al~~~~~l~~~ld~~~~~~d~l~~a~r~alaGN~iD~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~~ 201 (298)
++|+++|+.|+++++.+++.+++ ++++|.+++++++|||++|||+.... . +++++++.+++.++++|.+||++
T Consensus 85 ~~K~~~n~~a~~~l~~~~~~l~~---~~~~l~~~l~~sl~GN~~D~g~~~~~-~---~~~d~~~~~~~~~~~~~~~dd~~ 157 (300)
T 2ffj_A 85 EVKARANEVARQVLPLAKEIVEG---SDDPFKTAVIVSIVGNNFDYGVQGHK-V---VEEEFRDFLKRKVQEGLKINDTE 157 (300)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH---SSSHHHHHHHHHHHGGGCCC-------C---HHHHHHHHHHHHHHHCCSEECHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc---ChHHHHHHHHHHHhhHhhhccccccc-c---cCCCHHHHHHHhhccCcCcCCHH
Confidence 99999999999999998888854 46799999999999999999974310 0 02457777878888999999999
Q ss_pred HHHHHhcccCCCeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCCCccccCCHHHHHH-HHHHHhhhh
Q 022400 202 TFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPSINDVTYPELIE-IMSKVTENM 273 (298)
Q Consensus 202 ~~~~~L~~~~~k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~PilNDaT~~Da~~-~l~~~a~v~ 273 (298)
+|.+.|. ++|+||+||||| +|||++ |+++|+++|++|+++||++|++||||++|+.. ++++++.++
T Consensus 158 ~~~~~l~----~~v~~v~DNaGE-iv~Dll-l~~~Ll~~g~~V~~~vK~~P~vnDvT~~D~~~~~l~~~~~vi 224 (300)
T 2ffj_A 158 RIKELSS----GKVVYLTDNAGE-IFFDTL-LMKEIKRRCEKLTAVVRGRPIISDATIEDARLARVDKIADEL 224 (300)
T ss_dssp HHHHHTT----SEEEEECCBTTH-HHHHHH-HHHHHHTTCSEEEEEEBSSCCTTBCBHHHHHHTTHHHHSSEE
T ss_pred HHHHHhc----CCEEEEecCCcc-HHHHHH-HHHHHHHcCCeEEEEECCcCceecCCHHHHHHhhhhHHHhhh
Confidence 9999995 799999999996 999998 99999999999999999999999999999999 888765443
No 4
>3pt1_A UPF0364 protein YMR027W; alpha/beta fold, carbohydrate phosphatase, F6P binding, HYDR; HET: F6P; 1.77A {Saccharomyces cerevisiae}
Probab=99.81 E-value=8.2e-20 Score=179.87 Aligned_cols=167 Identities=20% Similarity=0.196 Sum_probs=117.6
Q ss_pred HHHHHHHHHHHH------cCCccchHHHHHHHHHHHHHHHHHHHHH----hhhh---hh---------chHHHHHHHHHH
Q 022400 102 LLCRLREQVLRE------LGFRDIFKKVKDEENAKAISLFGDVVRL----NDVI---ED---------EGKRVESLIRGI 159 (298)
Q Consensus 102 ~~~~~~~~~~~~------~g~~DPY~~~K~~~N~~Al~~~~~l~~~----ld~~---~~---------~~d~l~~a~r~a 159 (298)
.-+-+||.+... ...-|||..+|+..-..+...+-.+... +..+ .. ..+.|..+++++
T Consensus 110 aEcYlYRri~~~f~~s~~~~~~D~F~~qK~~~f~~s~~av~~La~~~~~l~~~~~~~~~~~~~~~~~~~~~~f~~~l~is 189 (471)
T 3pt1_A 110 SEVYLYRRVNVLFQRQCEWAKFDIFNRLKQSTFESSFYGVVELALRYENLLPQLREMKQNPGNEIDDILKVLFKEFIEIS 189 (471)
T ss_dssp HHHHHHHHHHHHHHHSTTTTTCCTTHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCCCCcCCCCchHHHHHHHHhhHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHHHH
Confidence 334455555543 3556999999999887554433333322 2111 11 135688999999
Q ss_pred HHhhhhhhchhhhhhhhccCcccHH-HHHhhhcCCCCCCCCHHHHHHHhcc------cCCCeEEEEecCCCcchhcchHH
Q 022400 160 FAGNIFDLGSAQLAEVFSKDGMSFL-ASCQNLVPRPWVIDDLETFKVKWSK------KAWKKAVIFVDNSGADIILGILP 232 (298)
Q Consensus 160 laGN~iD~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dd~~~~~~~L~~------~~~k~ilyl~DNaGEdiVfD~lp 232 (298)
++||.+|+|....... + +-..++ ....+.++..+.+||++++.+.|.+ .+.++|.|++||||.|+|+|++
T Consensus 190 LWGN~~DLsl~~~~~~-~-~~~~~~~~~~~~~~~~~ilvdD~~~l~~~L~~~k~~~~~~~~rVdiVlDNaGfEl~~Dl~- 266 (471)
T 3pt1_A 190 LWGNATDLSLLTNATL-E-DIKSIQGAKARAASESKIVVNDTEKAWEVLTKARADANSREIRVDFVLDNSGFELYADLM- 266 (471)
T ss_dssp HHGGGCCHHHHTCCSH-H-HHHSHHHHHHHHHHHTTEEEECHHHHHHHHHHHHHCSSCCCCEEEEECCBSTHHHHHHHH-
T ss_pred HHhhhhcccccCCcch-H-hhhhhhhHHHHHHhhcCccccCHHHHHHHHHHhhccccCCCceEEEEEeCCcchhhHHHH-
Confidence 9999999998542100 0 000121 1233345678999999999999973 1235899999999933999998
Q ss_pred HHHHHHhCC--CEEEEEecCCCc-cccCCHHHHHHHHHHHhh
Q 022400 233 FARELLRRG--TQVILAANDLPS-INDVTYPELIEIMSKVTE 271 (298)
Q Consensus 233 li~~L~~~g--~~V~lavk~~Pi-lNDaT~~Da~~~l~~~a~ 271 (298)
|++.|++.| .+|+++||+.|+ +||||.+|+...|+.++.
T Consensus 267 Lae~Ll~~gla~~V~~hvK~~PwfVSDvT~~D~~~~l~~L~~ 308 (471)
T 3pt1_A 267 LAAFLLQSGLATKCIFHAKDIPYMVSDVMLKDFDILVHDLRD 308 (471)
T ss_dssp HHHHHHHHTSCSEEEEEEBSSCCTTTBCBHHHHHHHHHHHHC
T ss_pred HHHHHHHcCCCcEEEEEecCCCceeecCcHHHHHHHHHHHhc
Confidence 999999876 599999999997 999999999988887764
No 5
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=68.91 E-value=36 Score=27.58 Aligned_cols=95 Identities=15% Similarity=0.114 Sum_probs=56.7
Q ss_pred HHHHHHHHHHH-HhhhhhhchhhhhhhhccCcccHHHHHhhhcCCCCCCC-CHHHHHHHhcccCCCeEEEEecCCCcchh
Q 022400 150 KRVESLIRGIF-AGNIFDLGSAQLAEVFSKDGMSFLASCQNLVPRPWVID-DLETFKVKWSKKAWKKAVIFVDNSGADII 227 (298)
Q Consensus 150 d~l~~a~r~al-aGN~iD~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-d~~~~~~~L~~~~~k~ilyl~DNaGEdiV 227 (298)
+.+..+++... +.+++=+|.....-+ -..+...+.++-..-..+. +...+...+.....+.++++...+|+ --
T Consensus 27 ~~l~~~~~~i~~a~~I~i~G~G~S~~~----a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~d~~i~iS~sG~-t~ 101 (187)
T 3sho_A 27 EAIEAAVEAICRADHVIVVGMGFSAAV----AVFLGHGLNSLGIRTTVLTEGGSTLTITLANLRPTDLMIGVSVWRY-LR 101 (187)
T ss_dssp HHHHHHHHHHHHCSEEEEECCGGGHHH----HHHHHHHHHHTTCCEEEECCCTHHHHHHHHTCCTTEEEEEECCSSC-CH
T ss_pred HHHHHHHHHHHhCCEEEEEecCchHHH----HHHHHHHHHhcCCCEEEecCCchhHHHHHhcCCCCCEEEEEeCCCC-CH
Confidence 45666666555 455656776442211 1234444444322222333 45556555544346789999999998 43
Q ss_pred cchHHHHHHHHhCCCEEEEEecC
Q 022400 228 LGILPFARELLRRGTQVILAAND 250 (298)
Q Consensus 228 fD~lpli~~L~~~g~~V~lavk~ 250 (298)
+.+-.++..+++|.+|+.....
T Consensus 102 -~~~~~~~~ak~~g~~vi~IT~~ 123 (187)
T 3sho_A 102 -DTVAALAGAAERGVPTMALTDS 123 (187)
T ss_dssp -HHHHHHHHHHHTTCCEEEEESC
T ss_pred -HHHHHHHHHHHCCCCEEEEeCC
Confidence 4445778888999999888763
No 6
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=66.99 E-value=4.4 Score=36.79 Aligned_cols=35 Identities=17% Similarity=0.357 Sum_probs=31.2
Q ss_pred eEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEec
Q 022400 214 KAVIFVDNSGADIILGILPFARELLRRGTQVILAAN 249 (298)
Q Consensus 214 ~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk 249 (298)
+|++++...+. .+.-++++++.|.++|++|+++.-
T Consensus 3 rIl~~~~~~~g-h~~~~~~la~~L~~~GheV~v~~~ 37 (391)
T 3tsa_A 3 RVLVVPLPYPT-HLMAMVPLCWALQASGHEVLIAAP 37 (391)
T ss_dssp EEEEECCSCHH-HHHTTHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEEcCCCcc-hhhhHHHHHHHHHHCCCEEEEecC
Confidence 78999988887 788888999999999999999874
No 7
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=66.34 E-value=5.2 Score=36.61 Aligned_cols=36 Identities=11% Similarity=0.234 Sum_probs=32.3
Q ss_pred CeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEec
Q 022400 213 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAAN 249 (298)
Q Consensus 213 k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk 249 (298)
-||++++...+. .+.-+++|++.|.++|++|+++.-
T Consensus 21 MrIl~~~~~~~G-hv~~~~~La~~L~~~GheV~v~~~ 56 (398)
T 3oti_A 21 MRVLFVSSPGIG-HLFPLIQLAWGFRTAGHDVLIAVA 56 (398)
T ss_dssp CEEEEECCSSHH-HHGGGHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEcCCCcc-hHhHHHHHHHHHHHCCCEEEEecc
Confidence 379999988887 888899999999999999999875
No 8
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=62.18 E-value=6.9 Score=35.68 Aligned_cols=37 Identities=19% Similarity=0.458 Sum_probs=32.2
Q ss_pred CeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecC
Q 022400 213 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAAND 250 (298)
Q Consensus 213 k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~ 250 (298)
-+|++++...+. .+.-++++++.|.++|++|++++.+
T Consensus 16 MrIl~~~~~~~g-h~~~~~~La~~L~~~GheV~v~~~~ 52 (398)
T 4fzr_A 16 MRILVIAGCSEG-FVMPLVPLSWALRAAGHEVLVAASE 52 (398)
T ss_dssp CEEEEECCSSHH-HHGGGHHHHHHHHHTTCEEEEEEEG
T ss_pred eEEEEEcCCCcc-hHHHHHHHHHHHHHCCCEEEEEcCH
Confidence 479999988877 7788889999999999999998753
No 9
>2gq0_A Chaperone protein HTPG; molecular chaperone, HSP90, E. coli, hydrolase; 1.90A {Escherichia coli}
Probab=59.51 E-value=25 Score=32.38 Aligned_cols=47 Identities=21% Similarity=0.288 Sum_probs=35.4
Q ss_pred CHHHHHHHhcccCCCeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEe
Q 022400 199 DLETFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLRRGTQVILAA 248 (298)
Q Consensus 199 d~~~~~~~L~~~~~k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lav 248 (298)
.+++..++++. +.+.|.|+++.+-+ .+--- |+++.++++|.+|+++.
T Consensus 187 SL~eYv~rmke-~Qk~IYYitg~s~~-~~~~s-p~lE~~k~kG~EVL~l~ 233 (303)
T 2gq0_A 187 SLEDYVSRMKE-GQEKIYYITADSYA-AAKSS-PHLELLRKKGIEVLLLS 233 (303)
T ss_dssp CHHHHHHTCCT-TCCSEEEEECSSHH-HHHTC-GGGHHHHHHTCCEEEEC
T ss_pred eHHHHHHhccc-CCceEEEEeCCCHH-HHhcC-hHHHHHHHCCCeEEEeC
Confidence 45666666654 35789999987776 66666 89999999999998873
No 10
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=58.32 E-value=26 Score=29.85 Aligned_cols=95 Identities=13% Similarity=0.166 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHH------hhhhhhchhhhhhhhccCcccHHHHHhhhcCCCCCCCCHHHHHHHhcccCCCeEEEEecCCC
Q 022400 150 KRVESLIRGIFA------GNIFDLGSAQLAEVFSKDGMSFLASCQNLVPRPWVIDDLETFKVKWSKKAWKKAVIFVDNSG 223 (298)
Q Consensus 150 d~l~~a~r~ala------GN~iD~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~~~~~~~L~~~~~k~ilyl~DNaG 223 (298)
+.+..+++...- ++++=+|.....-+ -..+...+.++-..-..+.+.+.+...+.....+.++++..++|
T Consensus 42 ~~i~~~~~~i~~~a~~~a~~I~i~G~G~S~~~----A~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~DlvI~iS~SG 117 (220)
T 3etn_A 42 DAYEKAVELIVEQIHRKKGKLVTSGMGKAGQI----AMNIATTFCSTGIPSVFLHPSEAQHGDLGILQENDLLLLISNSG 117 (220)
T ss_dssp THHHHHHHHHHHHTTTTCCCEEEECSHHHHHH----HHHHHHHHHHTTCCEEECCTTGGGBTGGGGCCTTCEEEEECSSS
T ss_pred HHHHHHHHHHHhHhhccCCEEEEEEecHHHHH----HHHHHHHHHhcCCcEEEeCCHHHHHhhhccCCCCCEEEEEcCCC
Confidence 456666666554 66667776442111 12334444443222233344433322222223567999999999
Q ss_pred cchhcchHHHHHHHHh--CCCEEEEEecC
Q 022400 224 ADIILGILPFARELLR--RGTQVILAAND 250 (298)
Q Consensus 224 EdiVfD~lpli~~L~~--~g~~V~lavk~ 250 (298)
+ - -+.+-.++.+++ +|.+|+.....
T Consensus 118 ~-t-~~~i~~~~~ak~~~~Ga~vI~IT~~ 144 (220)
T 3etn_A 118 K-T-REIVELTQLAHNLNPGLKFIVITGN 144 (220)
T ss_dssp C-C-HHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred C-C-HHHHHHHHHHHhcCCCCeEEEEECC
Confidence 8 4 355557888899 99999988753
No 11
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=58.23 E-value=5.9 Score=36.71 Aligned_cols=36 Identities=14% Similarity=0.047 Sum_probs=31.5
Q ss_pred eEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecC
Q 022400 214 KAVIFVDNSGADIILGILPFARELLRRGTQVILAAND 250 (298)
Q Consensus 214 ~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~ 250 (298)
+|+++++-+.. .|.-++++++.|.++|++|++++.+
T Consensus 2 rIli~~~gt~G-hv~p~~~La~~L~~~Gh~V~v~~~~ 37 (404)
T 3h4t_A 2 GVLITGCGSRG-DTEPLVALAARLRELGADARMCLPP 37 (404)
T ss_dssp CEEEEEESSHH-HHHHHHHHHHHHHHTTCCEEEEECG
T ss_pred eEEEEeCCCCc-cHHHHHHHHHHHHHCCCeEEEEeCH
Confidence 58888888888 7788889999999999999999854
No 12
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=55.39 E-value=11 Score=34.13 Aligned_cols=36 Identities=25% Similarity=0.321 Sum_probs=31.2
Q ss_pred CeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEec
Q 022400 213 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAAN 249 (298)
Q Consensus 213 k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk 249 (298)
=|||+++=-+.. .++=+++|++.|.++|++|+++.-
T Consensus 23 MRIL~~~~p~~G-Hv~P~l~LA~~L~~rGh~Vt~~t~ 58 (400)
T 4amg_A 23 MRALFITSPGLS-HILPTVPLAQALRALGHEVRYATG 58 (400)
T ss_dssp CEEEEECCSSHH-HHGGGHHHHHHHHHTTCEEEEEEC
T ss_pred CeEEEECCCchh-HHHHHHHHHHHHHHCCCEEEEEeC
Confidence 379988877777 888888999999999999999874
No 13
>3pry_A Heat shock protein HSP 90-beta; structural genomics, structural genomics consortium, SGC, HE protein, chaperone; 2.28A {Homo sapiens} SCOP: d.14.1.8
Probab=55.11 E-value=91 Score=28.12 Aligned_cols=47 Identities=15% Similarity=0.271 Sum_probs=35.8
Q ss_pred CHHHHHHHhcccCCCeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEe
Q 022400 199 DLETFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLRRGTQVILAA 248 (298)
Q Consensus 199 d~~~~~~~L~~~~~k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lav 248 (298)
.+++..++++. +.+.|.|++..+=+ .+--. |+++.++++|.+|+++.
T Consensus 186 SL~eYv~rmke-~Q~~IyYitg~s~~-~~~~s-p~~E~~k~kg~EVL~l~ 232 (268)
T 3pry_A 186 SLSEYVSRMKE-TQKSIYYITGESKE-QVANS-AFVERVRKRGFEVVYMT 232 (268)
T ss_dssp EHHHHHHTSCT-TCCEEEEECSCCHH-HHHTC-HHHHHHHTTTCCEEECC
T ss_pred eHHHHHHhccc-CCceEEEEeCCCHH-HHHhC-hHHHHHHHcCceEEEeC
Confidence 35555666543 36789999977776 66666 89999999999999874
No 14
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=54.91 E-value=9.3 Score=34.40 Aligned_cols=36 Identities=17% Similarity=0.253 Sum_probs=30.0
Q ss_pred CeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEec
Q 022400 213 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAAN 249 (298)
Q Consensus 213 k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk 249 (298)
.+|++++--+.. .+.=+++|++.|.++|++|++++-
T Consensus 5 ~~il~~~~~~~G-hv~~~~~La~~L~~~GheV~v~~~ 40 (402)
T 3ia7_A 5 RHILFANVQGHG-HVYPSLGLVSELARRGHRITYVTT 40 (402)
T ss_dssp CEEEEECCSSHH-HHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEEeCCCCc-ccccHHHHHHHHHhCCCEEEEEcC
Confidence 478888877666 666777899999999999999874
No 15
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=53.75 E-value=45 Score=27.51 Aligned_cols=95 Identities=11% Similarity=0.140 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHH--hhhhhhchhhhhhhhccCcccHHHHHhhhcCCCCCCCCHHHHHHHhcccCCCeEEEEecCCCcchh
Q 022400 150 KRVESLIRGIFA--GNIFDLGSAQLAEVFSKDGMSFLASCQNLVPRPWVIDDLETFKVKWSKKAWKKAVIFVDNSGADII 227 (298)
Q Consensus 150 d~l~~a~r~ala--GN~iD~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~~~~~~~L~~~~~k~ilyl~DNaGEdiV 227 (298)
+.+..+++...- ++++=+|.....-+ -..+...+.++-..-..+.+.+.+...+.....+.++++...+|+ --
T Consensus 32 ~~i~~~~~~i~~a~~~I~i~G~G~S~~~----A~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dvvI~iS~sG~-t~ 106 (201)
T 3fxa_A 32 EALVKTVEKIAECTGKIVVAGCGTSGVA----AKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGN-TG 106 (201)
T ss_dssp HHHHHHHHHHHHCSSCEEEECCTHHHHH----HHHHHHHHHHTTCCEEECCHHHHTTTGGGGCCTTCEEEEECSSSC-CH
T ss_pred HHHHHHHHHHHhcCCcEEEEEecHHHHH----HHHHHHHHHhcCCcEEEeCchHHHhhhhhcCCCCCEEEEEeCCCC-CH
Confidence 567777776664 36777776443111 123444445432222334444433332222235679999999998 42
Q ss_pred cchHHHHHHHHhCCCEEEEEecC
Q 022400 228 LGILPFARELLRRGTQVILAAND 250 (298)
Q Consensus 228 fD~lpli~~L~~~g~~V~lavk~ 250 (298)
+.+-.++.++++|.+|+.....
T Consensus 107 -~~~~~~~~ak~~g~~vi~IT~~ 128 (201)
T 3fxa_A 107 -ELLNLIPACKTKGSTLIGVTEN 128 (201)
T ss_dssp -HHHTTHHHHHHHTCEEEEEESC
T ss_pred -HHHHHHHHHHHcCCeEEEEECC
Confidence 3444678888889999888753
No 16
>1hk7_A Heat shock protein HSP82; ATPase, chaperone; 2.5A {Saccharomyces cerevisiae} SCOP: d.14.1.8
Probab=53.64 E-value=64 Score=29.46 Aligned_cols=47 Identities=15% Similarity=0.212 Sum_probs=33.7
Q ss_pred CHHHHHHHhcccCCCeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEe
Q 022400 199 DLETFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLRRGTQVILAA 248 (298)
Q Consensus 199 d~~~~~~~L~~~~~k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lav 248 (298)
.+++..++++. +.+.|.|+++.+=+ .+--. |+++.++++|.+|+++.
T Consensus 184 SL~eYv~rmke-~Qk~IYYitg~s~~-~~~~s-p~lE~~k~kg~EVL~l~ 230 (288)
T 1hk7_A 184 SLTDYVTRMPE-HQKNIYYITGESLK-AVEKS-PFLDALKAKNFEVLFLT 230 (288)
T ss_dssp CHHHHHHHSCT-TCCEEEEEECSSHH-HHHTC-GGGHHHHTTTCCCEEEC
T ss_pred cHHHHHhhCcC-CCceEEEEeCCCHH-HHhcC-HHHHHHHHCCCEEEEec
Confidence 46666677654 36789999988665 65555 77777777777777763
No 17
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=52.74 E-value=18 Score=28.64 Aligned_cols=34 Identities=32% Similarity=0.384 Sum_probs=29.1
Q ss_pred CCeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCC
Q 022400 212 WKKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDL 251 (298)
Q Consensus 212 ~k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~ 251 (298)
.+++++++ +|. ++.. +++.|.+.|.+|+++.+..
T Consensus 19 ~~~v~IiG--~G~---iG~~-la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFG--CGR---LGSL-IANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEEC--CSH---HHHH-HHHHHHHTTCEEEEEESCG
T ss_pred CCcEEEEC--CCH---HHHH-HHHHHHhCCCeEEEEECCH
Confidence 57899998 787 7997 9999999999999987753
No 18
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=52.48 E-value=11 Score=32.77 Aligned_cols=34 Identities=29% Similarity=0.362 Sum_probs=29.7
Q ss_pred CeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCCC
Q 022400 213 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLP 252 (298)
Q Consensus 213 k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~P 252 (298)
++||+.+ ||. ++.- +++.|++.|++|+...|..+
T Consensus 4 ~~ilVtG--aG~---iG~~-l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 4 SKILIAG--CGD---LGLE-LARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCEEEEC--CSH---HHHH-HHHHHHHTTCCEEEEECTTS
T ss_pred CcEEEEC--CCH---HHHH-HHHHHHHCCCEEEEEeCCcc
Confidence 5788887 587 7997 99999999999999999855
No 19
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=49.10 E-value=13 Score=33.59 Aligned_cols=36 Identities=28% Similarity=0.469 Sum_probs=30.0
Q ss_pred eEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecC
Q 022400 214 KAVIFVDNSGADIILGILPFARELLRRGTQVILAAND 250 (298)
Q Consensus 214 ~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~ 250 (298)
+|++++...|. .+.=.+++++.|.++|++|+++..+
T Consensus 2 rIl~~~~~~~G-h~~p~~~la~~L~~~Gh~V~~~~~~ 37 (384)
T 2p6p_A 2 RILFVAAGSPA-TVFALAPLATAARNAGHQVVMAANQ 37 (384)
T ss_dssp EEEEECCSSHH-HHHHHHHHHHHHHHTTCEEEEEECG
T ss_pred EEEEEeCCccc-hHhHHHHHHHHHHHCCCEEEEEeCH
Confidence 68888888887 6666778999999999999998644
No 20
>3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major}
Probab=48.47 E-value=88 Score=30.28 Aligned_cols=47 Identities=19% Similarity=0.317 Sum_probs=32.8
Q ss_pred CHHHHHHHhcccCCCeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEe
Q 022400 199 DLETFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLRRGTQVILAA 248 (298)
Q Consensus 199 d~~~~~~~L~~~~~k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lav 248 (298)
.+++..++++. +.+.|.|+++.+=+ .+--. |+++.++++|.+|+++.
T Consensus 202 SL~eYv~rmke-~Qk~IYYitg~s~~-~~~~s-p~lE~~k~kG~EVL~l~ 248 (444)
T 3hjc_A 202 TLKDYVTRMKA-GQKSIYYITGDSKK-KLETS-PFIEQARRRGLEVLFMT 248 (444)
T ss_dssp CHHHHHHTCCT-TCCEEEEEECSCHH-HHHTC-GGGHHHHHHTCCEEEEC
T ss_pred cHHHHHHhccc-cCceEEEEeCCCHH-HHHhC-hHHHHHHhCCcEEEEeC
Confidence 45555555543 36789999987655 55455 78888888888888764
No 21
>1usu_A Heat shock protein HSP82; chaperone/complex, chaperone, activator, HSP90; 2.15A {Saccharomyces cerevisiae} SCOP: d.14.1.8 PDB: 1usv_A
Probab=46.58 E-value=65 Score=28.96 Aligned_cols=47 Identities=15% Similarity=0.205 Sum_probs=36.2
Q ss_pred CHHHHHHHhcccCCCeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEe
Q 022400 199 DLETFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLRRGTQVILAA 248 (298)
Q Consensus 199 d~~~~~~~L~~~~~k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lav 248 (298)
.+++..++++. +.+.|.|++..+=+ .+--. |+++.++++|.+|.++.
T Consensus 186 sL~eYv~rmke-~Q~~IyY~t~~s~~-~~~~s-p~lE~~k~kg~EVL~l~ 232 (260)
T 1usu_A 186 SLTDYVTRMPE-HQKNIYYITGESLK-SVEKS-PFLDALKAKNFEVLFLT 232 (260)
T ss_dssp EHHHHHHTSCT-TCCEEEEEECSSHH-HHHTC-TTHHHHHHTTCCEEEEC
T ss_pred eHHHHHHhccC-CCceEEEEeCCCHH-HHhcC-hHHHHHHhCCCeEEEeC
Confidence 35555566554 36789999988776 66666 89999999999999974
No 22
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=46.45 E-value=18 Score=32.70 Aligned_cols=38 Identities=16% Similarity=0.226 Sum_probs=32.0
Q ss_pred CCeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecC
Q 022400 212 WKKAVIFVDNSGADIILGILPFARELLRRGTQVILAAND 250 (298)
Q Consensus 212 ~k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~ 250 (298)
.-+|++++-..|. .+.-.+++++.|.++|++|+++..+
T Consensus 20 ~MrIl~~~~~~~G-h~~~~~~la~~L~~~GheV~v~~~~ 57 (412)
T 3otg_A 20 HMRVLFASLGTHG-HTYPLLPLATAARAAGHEVTFATGE 57 (412)
T ss_dssp SCEEEEECCSSHH-HHGGGHHHHHHHHHTTCEEEEEECG
T ss_pred eeEEEEEcCCCcc-cHHHHHHHHHHHHHCCCEEEEEccH
Confidence 3479999988877 6667778999999999999999864
No 23
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=46.43 E-value=15 Score=31.71 Aligned_cols=34 Identities=18% Similarity=0.237 Sum_probs=29.5
Q ss_pred CeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCCC
Q 022400 213 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLP 252 (298)
Q Consensus 213 k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~P 252 (298)
++|++.+ ||. ++.- +++.|++.|++|+..+|...
T Consensus 6 ~~ilVtG--aG~---iG~~-l~~~L~~~g~~V~~~~r~~~ 39 (286)
T 3ius_A 6 GTLLSFG--HGY---TARV-LSRALAPQGWRIIGTSRNPD 39 (286)
T ss_dssp CEEEEET--CCH---HHHH-HHHHHGGGTCEEEEEESCGG
T ss_pred CcEEEEC--CcH---HHHH-HHHHHHHCCCEEEEEEcChh
Confidence 5788888 587 7996 99999999999999999764
No 24
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=46.00 E-value=75 Score=25.48 Aligned_cols=94 Identities=15% Similarity=0.133 Sum_probs=54.9
Q ss_pred HHHHHHHHHHH-h-hhhhhchhhhhhhhccCcccHHHHHhhhcCCCCCCCCHHHHHHHhcccCCCeEEEEecCCCcchhc
Q 022400 151 RVESLIRGIFA-G-NIFDLGSAQLAEVFSKDGMSFLASCQNLVPRPWVIDDLETFKVKWSKKAWKKAVIFVDNSGADIIL 228 (298)
Q Consensus 151 ~l~~a~r~ala-G-N~iD~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~~~~~~~L~~~~~k~ilyl~DNaGEdiVf 228 (298)
.+..+++...- + +++=+|......+ -..+...+.++-.....+++.+.+...+.....+.++++...+|+ --
T Consensus 37 ~i~~~~~~i~~a~~~I~i~G~G~S~~~----a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~d~vI~iS~sG~-t~- 110 (183)
T 2xhz_A 37 NFTLACEKMFWCKGKVVVMGMGASGHI----GRKMAATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGE-SS- 110 (183)
T ss_dssp HHHHHHHHHHTCSSCEEEEECHHHHHH----HHHHHHHHHTTTCCEEECCTTHHHHHTSTTCCTTCEEEEECSSSC-CH-
T ss_pred HHHHHHHHHHhCCCeEEEEeecHHHHH----HHHHHHHHHhcCceEEEeCchHHhhhhhccCCCCCEEEEEeCCCC-CH-
Confidence 56666666553 3 7777776543211 123444444432222344555554443332235789999999998 43
Q ss_pred chHHHHHHHHhCCCEEEEEecC
Q 022400 229 GILPFARELLRRGTQVILAAND 250 (298)
Q Consensus 229 D~lpli~~L~~~g~~V~lavk~ 250 (298)
+.+-.++.++++|.+|+.....
T Consensus 111 ~~~~~~~~ak~~g~~vi~IT~~ 132 (183)
T 2xhz_A 111 EITALIPVLKRLHVPLICITGR 132 (183)
T ss_dssp HHHHHHHHHHTTTCCEEEEESC
T ss_pred HHHHHHHHHHHCCCCEEEEECC
Confidence 3444678888889998887764
No 25
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=45.99 E-value=19 Score=32.77 Aligned_cols=37 Identities=30% Similarity=0.381 Sum_probs=31.3
Q ss_pred CeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecC
Q 022400 213 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAAND 250 (298)
Q Consensus 213 k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~ 250 (298)
.+|++++--++. .+.=+++|++.|.++|++|+++.-+
T Consensus 21 ~rIl~~~~~~~G-Hv~p~l~La~~L~~~Gh~V~v~~~~ 57 (415)
T 3rsc_A 21 AHLLIVNVASHG-LILPTLTVVTELVRRGHRVSYVTAG 57 (415)
T ss_dssp CEEEEECCSCHH-HHGGGHHHHHHHHHTTCEEEEEECG
T ss_pred CEEEEEeCCCcc-ccccHHHHHHHHHHCCCEEEEEeCH
Confidence 479998877666 7778889999999999999999843
No 26
>2fcj_A Small toprim domain protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: MES; 1.30A {Geobacillus stearothermophilus} SCOP: c.136.1.1 PDB: 2i5r_A*
Probab=44.10 E-value=41 Score=26.69 Aligned_cols=53 Identities=11% Similarity=0.169 Sum_probs=40.0
Q ss_pred CCeEEEEecCCCcchhcchHHHHHHHHhC--CCEEEEEecCCCccccCCHHHHHHHHHHH
Q 022400 212 WKKAVIFVDNSGADIILGILPFARELLRR--GTQVILAANDLPSINDVTYPELIEIMSKV 269 (298)
Q Consensus 212 ~k~ilyl~DNaGEdiVfD~lpli~~L~~~--g~~V~lavk~~PilNDaT~~Da~~~l~~~ 269 (298)
.+.|++|+|+-.. +.. +-+.|.+. |.+..|..|...=+++++.+++...|.++
T Consensus 50 ~r~VIi~TD~D~~----Gek-IRk~i~~~lp~~~hafi~r~~~gVE~a~~~~I~~aL~~~ 104 (119)
T 2fcj_A 50 GYDVYLLADADEA----GEK-LRRQFRRMFPEAEHLYIDRAYREVAAAPIWHLAQVLLRA 104 (119)
T ss_dssp TSEEEEECCSSHH----HHH-HHHHHHHHCTTSEEECCCTTTCSTTTSCHHHHHHHHHHT
T ss_pred CCCEEEEECCCcc----HHH-HHHHHHHHCCCCcEEeccCCccCcccCCHHHHHHHHHhc
Confidence 4789999977544 333 55555554 78999999998889999999998766554
No 27
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=43.71 E-value=54 Score=28.19 Aligned_cols=53 Identities=21% Similarity=0.347 Sum_probs=38.1
Q ss_pred CeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCCCcc-------ccCCHHHHHH-HHHHHh
Q 022400 213 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPSI-------NDVTYPELIE-IMSKVT 270 (298)
Q Consensus 213 k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~Pil-------NDaT~~Da~~-~l~~~a 270 (298)
|++++.+-+.| ++.- +++.|.+.|.+|+++.|...-+ =|+|-.+... .++++.
T Consensus 22 k~vlVTGas~g----IG~a-ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~ 82 (253)
T 2nm0_A 22 RSVLVTGGNRG----IGLA-IARAFADAGDKVAITYRSGEPPEGFLAVKCDITDTEQVEQAYKEIE 82 (253)
T ss_dssp CEEEEETTTSH----HHHH-HHHHHHHTTCEEEEEESSSCCCTTSEEEECCTTSHHHHHHHHHHHH
T ss_pred CEEEEeCCCCH----HHHH-HHHHHHHCCCEEEEEeCChHhhccceEEEecCCCHHHHHHHHHHHH
Confidence 56666665444 5997 9999999999999999876543 3787666554 555543
No 28
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=42.17 E-value=22 Score=28.05 Aligned_cols=33 Identities=21% Similarity=0.184 Sum_probs=28.2
Q ss_pred CCeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecC
Q 022400 212 WKKAVIFVDNSGADIILGILPFARELLRRGTQVILAAND 250 (298)
Q Consensus 212 ~k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~ 250 (298)
.+++++++ +|. ++.- +++.|.+.|++|+++.+.
T Consensus 3 ~~~vlI~G--~G~---vG~~-la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCG--HSI---LAIN-TILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEEC--CSH---HHHH-HHHHHHHTTCCEEEEECC
T ss_pred CCcEEEEC--CCH---HHHH-HHHHHHHCCCCEEEEECC
Confidence 36788887 687 6886 999999999999999885
No 29
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=41.68 E-value=22 Score=33.02 Aligned_cols=39 Identities=21% Similarity=0.302 Sum_probs=32.1
Q ss_pred CCeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCC
Q 022400 212 WKKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDL 251 (298)
Q Consensus 212 ~k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~ 251 (298)
.-+|++++--++. .++=.+++++.|.++|++|+++.-+.
T Consensus 20 ~mrIl~~~~~~~G-Hv~p~l~la~~L~~~GheV~~~~~~~ 58 (441)
T 2yjn_A 20 HMRVVFSSMASKS-HLFGLVPLAWAFRAAGHEVRVVASPA 58 (441)
T ss_dssp CCEEEEECCSCHH-HHTTTHHHHHHHHHTTCEEEEEECGG
T ss_pred ccEEEEEcCCCcc-hHhHHHHHHHHHHHCCCeEEEEeCch
Confidence 3579988877777 67777899999999999999987543
No 30
>1y6z_A Heat shock protein, putative; chaperone, structural genomics, structural genom consortium, SGC, unknown function; 1.88A {Plasmodium falciparum}
Probab=39.31 E-value=56 Score=29.36 Aligned_cols=47 Identities=13% Similarity=0.128 Sum_probs=35.3
Q ss_pred CHHHHHHHhcccCCCeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEe
Q 022400 199 DLETFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLRRGTQVILAA 248 (298)
Q Consensus 199 d~~~~~~~L~~~~~k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lav 248 (298)
.+++..++++. +.+.|.|++..+-+ .+--. |+++.++++|.+|+++.
T Consensus 189 sL~eYv~rmke-~Q~~IyY~t~~~~~-~~~~s-p~~E~~~~kg~EVL~l~ 235 (263)
T 1y6z_A 189 DLDSYIENMKE-DQKCIYYISGENKK-TAQNS-PSLEKLKALNYDVLFSL 235 (263)
T ss_dssp EHHHHHHTCCT-TCCSEEEEECSSHH-HHHTC-GGGHHHHHHTCCCEEEC
T ss_pred eHHHHHHhccC-CCceEEEEeCCCHH-HHhcC-cHHHHHHhCCCeEEEeC
Confidence 45555555543 36789999988765 55556 89999999999999874
No 31
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=38.10 E-value=24 Score=32.41 Aligned_cols=36 Identities=17% Similarity=0.098 Sum_probs=29.7
Q ss_pred eEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecC
Q 022400 214 KAVIFVDNSGADIILGILPFARELLRRGTQVILAAND 250 (298)
Q Consensus 214 ~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~ 250 (298)
+|++++=-++. .++=.+++++.|.++|++|+++.-.
T Consensus 2 rIl~~~~~~~G-H~~p~l~la~~L~~~Gh~V~~~~~~ 37 (416)
T 1rrv_A 2 RVLLSVCGTRG-DVEIGVALADRLKALGVQTRMCAPP 37 (416)
T ss_dssp EEEEEEESCHH-HHHHHHHHHHHHHHTTCEEEEEECG
T ss_pred eEEEEecCCCc-cHHHHHHHHHHHHHCCCeEEEEeCH
Confidence 57777777777 6677778999999999999998754
No 32
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=37.93 E-value=66 Score=27.03 Aligned_cols=53 Identities=15% Similarity=0.157 Sum_probs=37.5
Q ss_pred CCeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCCC--------ccccCCHHHHHH-HHHHH
Q 022400 212 WKKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLP--------SINDVTYPELIE-IMSKV 269 (298)
Q Consensus 212 ~k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~P--------ilNDaT~~Da~~-~l~~~ 269 (298)
.|++|+.+-+ |. ++.- +++.|.+.|.+|+++.|... +.-|+|-.+... .++++
T Consensus 7 ~k~vlVTGas-~g---IG~~-ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 68 (241)
T 1dhr_A 7 ARRVLVYGGR-GA---LGSR-CVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAEV 68 (241)
T ss_dssp CCEEEEETTT-SH---HHHH-HHHHHHTTTCEEEEEESSCCTTSSEEEECCCCSCHHHHHHHHHHHH
T ss_pred CCEEEEECCC-cH---HHHH-HHHHHHhCCCEEEEEeCChhhccCCcEEEEcCCCCHHHHHHHHHHH
Confidence 3556655544 44 5997 99999999999999998753 235888766554 55554
No 33
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=34.63 E-value=28 Score=31.93 Aligned_cols=37 Identities=14% Similarity=0.085 Sum_probs=29.9
Q ss_pred eEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCC
Q 022400 214 KAVIFVDNSGADIILGILPFARELLRRGTQVILAANDL 251 (298)
Q Consensus 214 ~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~ 251 (298)
+|++++=-++. .++=++++++.|.++|++|+++.-..
T Consensus 2 ~Il~~~~~~~G-Hv~P~l~la~~L~~~Gh~V~~~~~~~ 38 (415)
T 1iir_A 2 RVLLATCGSRG-DTEPLVALAVRVRDLGADVRMCAPPD 38 (415)
T ss_dssp EEEEECCSCHH-HHHHHHHHHHHHHHTTCEEEEEECGG
T ss_pred eEEEEcCCCch-hHHHHHHHHHHHHHCCCeEEEEcCHH
Confidence 57777777777 67777789999999999999987553
No 34
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=34.27 E-value=35 Score=30.05 Aligned_cols=39 Identities=21% Similarity=0.285 Sum_probs=29.1
Q ss_pred CeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCCC
Q 022400 213 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLP 252 (298)
Q Consensus 213 k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~P 252 (298)
.+|++++...|. .+.=.+.+++.|.+.|++|++++.+.+
T Consensus 7 mkIl~~~~~~gG-~~~~~~~la~~L~~~G~~V~v~~~~~~ 45 (364)
T 1f0k_A 7 KRLMVMAGGTGG-HVFPGLAVAHHLMAQGWQVRWLGTADR 45 (364)
T ss_dssp CEEEEECCSSHH-HHHHHHHHHHHHHTTTCEEEEEECTTS
T ss_pred cEEEEEeCCCcc-chhHHHHHHHHHHHcCCEEEEEecCCc
Confidence 579999877765 333233589999999999999986553
No 35
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=33.07 E-value=38 Score=30.90 Aligned_cols=38 Identities=24% Similarity=0.282 Sum_probs=29.2
Q ss_pred CeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCC
Q 022400 213 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDL 251 (298)
Q Consensus 213 k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~ 251 (298)
.+|++++--++. .+.=.+++++.|.++|++|+++.-+.
T Consensus 8 ~kIl~~~~~~~G-h~~p~~~la~~L~~~G~~V~~~~~~~ 45 (430)
T 2iyf_A 8 AHIAMFSIAAHG-HVNPSLEVIRELVARGHRVTYAIPPV 45 (430)
T ss_dssp CEEEEECCSCHH-HHGGGHHHHHHHHHTTCEEEEEECGG
T ss_pred ceEEEEeCCCCc-cccchHHHHHHHHHCCCeEEEEeCHH
Confidence 478888766655 44555579999999999999987543
No 36
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=32.77 E-value=47 Score=29.76 Aligned_cols=46 Identities=24% Similarity=0.310 Sum_probs=33.0
Q ss_pred HHHHHHHhcccCCCeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCC
Q 022400 200 LETFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDL 251 (298)
Q Consensus 200 ~~~~~~~L~~~~~k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~ 251 (298)
..-|...|...+.+++++++ +|. ..+. .+..|.+.|.+|+++-|+.
T Consensus 106 ~~Gf~~~L~~~~~k~vlvlG--aGG---aara-ia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 106 ALGFYLSLKQKNYQNALILG--AGG---SAKA-LACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp HHHHHHHCC---CCEEEEEC--CSH---HHHH-HHHHHHHTTCEEEEECSSC
T ss_pred HHHHHHHHHHcCCCEEEEEC--CCH---HHHH-HHHHHHHCCCEEEEEeCCH
Confidence 33444444322258999998 688 5885 9999999999999988874
No 37
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=31.86 E-value=35 Score=31.23 Aligned_cols=37 Identities=24% Similarity=0.284 Sum_probs=29.7
Q ss_pred CeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecC
Q 022400 213 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAAND 250 (298)
Q Consensus 213 k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~ 250 (298)
.+|++++=-+.. .+.=+++|++.|.++|++|+++.-+
T Consensus 13 ~~Il~~~~~~~G-Hv~p~l~la~~L~~~Gh~V~~~~~~ 49 (424)
T 2iya_A 13 RHISFFNIPGHG-HVNPSLGIVQELVARGHRVSYAITD 49 (424)
T ss_dssp CEEEEECCSCHH-HHHHHHHHHHHHHHTTCEEEEEECG
T ss_pred ceEEEEeCCCCc-ccchHHHHHHHHHHCCCeEEEEeCH
Confidence 578888766656 6666678999999999999999754
No 38
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=31.64 E-value=29 Score=26.20 Aligned_cols=32 Identities=25% Similarity=0.354 Sum_probs=26.9
Q ss_pred CeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecC
Q 022400 213 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAAND 250 (298)
Q Consensus 213 k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~ 250 (298)
+++++++ +|. ++.. +++.|.+.|.+|+++-+.
T Consensus 7 ~~v~I~G--~G~---iG~~-~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIG--LGR---FGGS-IVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CSEEEEC--CSH---HHHH-HHHHHHHTTCCCEEEESC
T ss_pred CcEEEEC--CCH---HHHH-HHHHHHHCCCEEEEEeCC
Confidence 5789888 587 6896 999999999999888664
No 39
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=31.58 E-value=65 Score=30.00 Aligned_cols=58 Identities=19% Similarity=0.279 Sum_probs=38.9
Q ss_pred CCHHHHHHHhcccCCCeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCCCccccCCHHHHH
Q 022400 198 DDLETFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPSINDVTYPELI 263 (298)
Q Consensus 198 dd~~~~~~~L~~~~~k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~PilNDaT~~Da~ 263 (298)
+++..+.+.+.. .+++++++ +|. .+.= ++..|.+.|.+|+++-++..++....-.++.
T Consensus 137 ~d~~~l~~~l~~--~~~vvViG--gG~---~g~E-~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~ 194 (431)
T 1q1r_A 137 EDAECIRRQLIA--DNRLVVIG--GGY---IGLE-VAATAIKANMHVTLLDTAARVLERVTAPPVS 194 (431)
T ss_dssp HHHHHHHHTCCT--TCEEEEEC--CSH---HHHH-HHHHHHHTTCEEEEECSSSSTTTTTSCHHHH
T ss_pred HHHHHHHHHhhc--CCeEEEEC--CCH---HHHH-HHHHHHhCCCEEEEEEeCCccccchhhHHHH
Confidence 344455555544 68999986 443 3554 7889999999999999887666544434443
No 40
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=31.51 E-value=1.7e+02 Score=22.11 Aligned_cols=66 Identities=21% Similarity=0.260 Sum_probs=37.3
Q ss_pred HHHHHHHhcc-cCCCeEEEEe--cCCCcchhcchHHHHHHHHhCCCEEE---EEecCCCccccCCHHHHHHHHHHHhh
Q 022400 200 LETFKVKWSK-KAWKKAVIFV--DNSGADIILGILPFARELLRRGTQVI---LAANDLPSINDVTYPELIEIMSKVTE 271 (298)
Q Consensus 200 ~~~~~~~L~~-~~~k~ilyl~--DNaGEdiVfD~lpli~~L~~~g~~V~---lavk~~PilNDaT~~Da~~~l~~~a~ 271 (298)
...|.+.+.. -..+++.+|+ ++.+. -.+.. +-+.|.+.|.+++ +.+++.|--.| +.+.+.-.++++
T Consensus 66 ~~~fl~~l~~~l~~k~~~~f~t~g~~~~-~a~~~--l~~~l~~~G~~~v~~~~~~~~~p~~~d---~~~~~~~~~l~~ 137 (138)
T 5nul_A 66 FEPFIEEISTKISGKKVALFGSYGWGDG-KWMRD--FEERMNGYGCVVVETPLIVQNEPDEAE---QDCIEFGKKIAN 137 (138)
T ss_dssp HHHHHHHHGGGCTTCEEEEEEEESSSCS-HHHHH--HHHHHHHTTCEECSCCEEEESSCGGGH---HHHHHHHHHHHT
T ss_pred HHHHHHHHHhhcCCCEEEEEEecCCCCC-hHHHH--HHHHHHHCCCEEECCceEEecCCCHHH---HHHHHHHHHHhc
Confidence 4555555542 1246776665 44422 22233 5677778898876 78889885433 555554444443
No 41
>2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae}
Probab=31.02 E-value=1.4e+02 Score=28.41 Aligned_cols=44 Identities=16% Similarity=0.227 Sum_probs=21.2
Q ss_pred HHHHHHHhcccCCCeEEEEecCCCcchhcchHHHHHHHHhCCCEEEE
Q 022400 200 LETFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLRRGTQVIL 246 (298)
Q Consensus 200 ~~~~~~~L~~~~~k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~l 246 (298)
+++..++++. +.+.|.|+++.+=+ .+--- |+++.++++|.+|++
T Consensus 185 L~eYv~rmke-~Q~~IyY~t~~s~~-~~~~s-p~~E~~k~kG~EVL~ 228 (405)
T 2cge_A 185 LTDYVTRMPE-HQKNIYYITGESLK-AVEKS-PFLDALKAKNFEVLF 228 (405)
T ss_dssp HHHHHHTCCT-TCCSEEEEECSCHH-HHHTC-TTHHHHHHHTCCEEE
T ss_pred HHHHHHhccC-CCceEEEEeCCCHH-HHhcC-hHHHHHHhCCCEEEE
Confidence 4444555443 35678888776432 22222 344444444444443
No 42
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=30.80 E-value=44 Score=26.75 Aligned_cols=35 Identities=26% Similarity=0.384 Sum_probs=27.5
Q ss_pred CeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCCC
Q 022400 213 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLP 252 (298)
Q Consensus 213 k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~P 252 (298)
++|++++- +|. ++.- +++.|++.|++|+...|...
T Consensus 4 ~~ilVtGa-tG~---iG~~-l~~~l~~~g~~V~~~~r~~~ 38 (206)
T 1hdo_A 4 KKIAIFGA-TGQ---TGLT-TLAQAVQAGYEVTVLVRDSS 38 (206)
T ss_dssp CEEEEEST-TSH---HHHH-HHHHHHHTTCEEEEEESCGG
T ss_pred CEEEEEcC-CcH---HHHH-HHHHHHHCCCeEEEEEeChh
Confidence 46666554 455 5996 99999999999999998754
No 43
>1xm5_A Hypothetical UPF0054 protein YBEY; structural genomics, protein structure initiative, nysgxrc target T842, PFAM family UPF0054, PSI; 2.70A {Escherichia coli} SCOP: d.92.1.15
Probab=30.49 E-value=77 Score=26.12 Aligned_cols=67 Identities=15% Similarity=0.123 Sum_probs=39.7
Q ss_pred ccHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhccCCCCCCCCChhHhHHHHHHHHHHHHcCCccchHHHH
Q 022400 51 NSIPSFKKRAESDPTVPDAHVRAEKFAQRYSEILEDMKKDPETHGGPPDCILLCRLREQVLRELGFRDIFKKVK 124 (298)
Q Consensus 51 ~Ci~C~~~qa~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~p~~~~~~~~~r~~~~~~~~~~~~~g~~DPY~~~K 124 (298)
=|++-..+||........ .+.+.-+...++. |.-++ ..++.....+...-+.+++.+|+.+||...|
T Consensus 88 Is~~~v~~qA~e~g~s~~-~el~~L~vHG~LH-LlGyD-----H~~~~e~~~M~~~E~~iL~~lg~~~py~~~~ 154 (155)
T 1xm5_A 88 ICRQVVEKEAQEQGKPLE-AHWAHMVVHGSLH-LLGYD-----HIEDDEAEEMEALETEIMLALGYEDPYIAEK 154 (155)
T ss_dssp EEHHHHHHHHHHTTCCHH-HHHHHHHHHHHHH-HTTCC-----CSSHHHHHHHHHHHHHHHHHTTCCCSCCC--
T ss_pred EcHHHHHHHHHHcCCCHH-HHHHHHHHHHHHH-hcCCC-----CCChhHHHHHHHHHHHHHHHcCCCCCccccc
Confidence 388888899876654422 3333334433333 33334 2333334466667778999999999997654
No 44
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=29.23 E-value=1.3e+02 Score=24.89 Aligned_cols=52 Identities=17% Similarity=0.250 Sum_probs=36.6
Q ss_pred CeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCCC--------ccccCCHHHHHH-HHHHH
Q 022400 213 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLP--------SINDVTYPELIE-IMSKV 269 (298)
Q Consensus 213 k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~P--------ilNDaT~~Da~~-~l~~~ 269 (298)
|++|+.+- +|. ++.- +++.|.+.|.+|+++.|... +.-|+|-.+... .++++
T Consensus 4 k~vlITGa-s~g---IG~~-~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 64 (236)
T 1ooe_A 4 GKVIVYGG-KGA---LGSA-ILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQT 64 (236)
T ss_dssp EEEEEETT-TSH---HHHH-HHHHHHHTTEEEEEEESSCCTTSSEEEECCTTSCHHHHHHHHHHHH
T ss_pred CEEEEECC-CcH---HHHH-HHHHHHHCCCEEEEEecCccccccccEEEeCCCCCHHHHHHHHHHH
Confidence 45555554 444 5997 99999999999999998754 235888766554 55544
No 45
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=29.09 E-value=54 Score=30.25 Aligned_cols=58 Identities=22% Similarity=0.184 Sum_probs=40.6
Q ss_pred CCCHHHHHHHhcccCCCeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCCCccccCCHHHH
Q 022400 197 IDDLETFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPSINDVTYPEL 262 (298)
Q Consensus 197 ~dd~~~~~~~L~~~~~k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~PilNDaT~~Da 262 (298)
.+|...+.+.+.. .+++++++ +|- .+.= ++..|.+.|.+|+++-++..++....-.++
T Consensus 133 ~~d~~~l~~~l~~--~~~vvVIG--gG~---~g~E-~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~ 190 (385)
T 3klj_A 133 YDDALKIKDECKN--KGKAFIIG--GGI---LGIE-LAQAIIDSGTPASIGIILEYPLERQLDRDG 190 (385)
T ss_dssp HHHHHHHHHHHHH--HSCEEEEC--CSH---HHHH-HHHHHHHHTCCEEEECSSSSSCTTTSCHHH
T ss_pred HHHHHHHHHHhhc--CCeEEEEC--CCH---HHHH-HHHHHHhCCCeEEEEEcCCccchhhcCHHH
Confidence 4456666666655 58899987 454 3554 778899999999999888777664333343
No 46
>3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A
Probab=29.04 E-value=2.1e+02 Score=27.61 Aligned_cols=47 Identities=15% Similarity=0.258 Sum_probs=34.8
Q ss_pred CHHHHHHHhcccCCCeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEe
Q 022400 199 DLETFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLRRGTQVILAA 248 (298)
Q Consensus 199 d~~~~~~~L~~~~~k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lav 248 (298)
.+++..++++. +.+.|.|++..+=+ .+--. |+++.++++|.+|+++.
T Consensus 186 SL~eYv~rmke-~Qk~IYYitg~s~~-~~~~s-p~lE~~k~kG~EVL~l~ 232 (448)
T 3q6m_A 186 SLKDYCTRMKE-NQKHIYYITGETKD-QVANS-AFVERLRKHGLEVIYMI 232 (448)
T ss_dssp EHHHHHHTCCS-SCCEEEEEECSCHH-HHHTS-GGGHHHHHHTCCEEEEC
T ss_pred eHHHHHHhccc-cCceEEEEecCCHH-HHHhC-hHHHHHHHCCCEEEEec
Confidence 34555555543 36789999977766 66566 89999999999999875
No 47
>1jil_A Tyrrs, tyrosyl-tRNA synthetase; truncation, based inhibitor design, ligase; HET: 485; 2.20A {Staphylococcus aureus} SCOP: c.26.1.1 PDB: 1jij_A* 1jii_A* 1jik_A*
Probab=28.82 E-value=2.1e+02 Score=27.20 Aligned_cols=71 Identities=15% Similarity=0.137 Sum_probs=46.0
Q ss_pred CCCHHHHHHHhcccCCCeEEEEe-cCCCcchhcchHH---HHHHHHhCCCEEEEEecCCCc-cccC----------CHHH
Q 022400 197 IDDLETFKVKWSKKAWKKAVIFV-DNSGADIILGILP---FARELLRRGTQVILAANDLPS-INDV----------TYPE 261 (298)
Q Consensus 197 ~dd~~~~~~~L~~~~~k~ilyl~-DNaGEdiVfD~lp---li~~L~~~g~~V~lavk~~Pi-lNDa----------T~~D 261 (298)
+.+-+++.+.|.+ .+..+|.+ |-+|.++-++=+. ..+.|++.|+++++.+=+.-. ++|. |.++
T Consensus 18 ~~~~~~L~~~L~~--~~~~iy~G~dPTg~sLHlGh~v~l~~~~~lQ~~G~~~~~lIgd~ta~igdp~gk~~~R~~l~~e~ 95 (420)
T 1jil_A 18 QTDEQGIEDLLNK--EQVTLYCGADPTADSLHIGHLLPFLTLRRFQEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEEQ 95 (420)
T ss_dssp BSCHHHHHHHHHH--SCCEEEEEECCSSSSCBHHHHHHHHHHHHHHHTTCEEEEEECTTGGGTCCCTTCSSCCCCCCHHH
T ss_pred cCCHHHHHHHHcC--CCCEEEEeeCCCCCCccHHHHHHHHHHHHHHHCCCcEEEEEcCceeEecCCCccccccccCCHHH
Confidence 3456778888865 23455555 9999657666432 234556669998877766654 7887 7777
Q ss_pred HHHHHHHH
Q 022400 262 LIEIMSKV 269 (298)
Q Consensus 262 a~~~l~~~ 269 (298)
+......+
T Consensus 96 i~~n~~~~ 103 (420)
T 1jil_A 96 VDKNIEGI 103 (420)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77644433
No 48
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=28.68 E-value=61 Score=24.22 Aligned_cols=32 Identities=25% Similarity=0.400 Sum_probs=26.3
Q ss_pred CeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecC
Q 022400 213 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAAND 250 (298)
Q Consensus 213 k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~ 250 (298)
.++++++ +|. ++.. +++.|.+.|++|+++.+.
T Consensus 5 m~i~IiG--~G~---iG~~-~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 5 MYIIIAG--IGR---VGYT-LAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp CEEEEEC--CSH---HHHH-HHHHHHHTTCEEEEEESC
T ss_pred CEEEEEC--CCH---HHHH-HHHHHHhCCCeEEEEECC
Confidence 4688886 687 6886 999999999999988764
No 49
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=28.63 E-value=1.1e+02 Score=25.66 Aligned_cols=35 Identities=26% Similarity=0.277 Sum_probs=27.3
Q ss_pred CeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCCC
Q 022400 213 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLP 252 (298)
Q Consensus 213 k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~P 252 (298)
|++++.+- +|. ++.- +++.|.+.|.+|+++.|..+
T Consensus 13 k~vlVTGa-sgg---iG~~-~a~~l~~~G~~V~~~~r~~~ 47 (265)
T 2o23_A 13 LVAVITGG-ASG---LGLA-TAERLVGQGASAVLLDLPNS 47 (265)
T ss_dssp CEEEEETT-TSH---HHHH-HHHHHHHTTCEEEEEECTTS
T ss_pred CEEEEECC-CCh---HHHH-HHHHHHHCCCEEEEEeCCcH
Confidence 55665554 455 5997 99999999999999998754
No 50
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=28.19 E-value=38 Score=30.05 Aligned_cols=35 Identities=20% Similarity=0.288 Sum_probs=28.5
Q ss_pred eEEEEecCC-CcchhcchHHHHHHHHhC--CCEEEEEecC
Q 022400 214 KAVIFVDNS-GADIILGILPFARELLRR--GTQVILAAND 250 (298)
Q Consensus 214 ~ilyl~DNa-GEdiVfD~lpli~~L~~~--g~~V~lavk~ 250 (298)
+||++.=++ | |+++-. |+++.|++. |.+|++++..
T Consensus 2 kILii~~~~~G-D~i~~~-p~l~~Lk~~~P~~~i~~l~~~ 39 (348)
T 1psw_A 2 KILVIGPSWVG-DMMMSQ-SLYRTLQARYPQAIIDVMAPA 39 (348)
T ss_dssp EEEEECCSSHH-HHHHHH-HHHHHHHHHSTTCEEEEEECG
T ss_pred eEEEEeccccC-HHHHHH-HHHHHHHHHCCCCEEEEEECc
Confidence 577777554 8 599888 899999986 8999999964
No 51
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=27.96 E-value=1.2e+02 Score=25.78 Aligned_cols=35 Identities=11% Similarity=0.169 Sum_probs=26.9
Q ss_pred CeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCCC
Q 022400 213 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLP 252 (298)
Q Consensus 213 k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~P 252 (298)
|++|+.+=+ |. ++.- +++.|.+.|.+|+++.|...
T Consensus 8 k~vlVTGas-~G---IG~a-ia~~l~~~G~~V~~~~r~~~ 42 (252)
T 3h7a_A 8 ATVAVIGAG-DY---IGAE-IAKKFAAEGFTVFAGRRNGE 42 (252)
T ss_dssp CEEEEECCS-SH---HHHH-HHHHHHHTTCEEEEEESSGG
T ss_pred CEEEEECCC-ch---HHHH-HHHHHHHCCCEEEEEeCCHH
Confidence 555555554 44 5997 99999999999999998754
No 52
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=27.74 E-value=57 Score=27.10 Aligned_cols=50 Identities=14% Similarity=0.227 Sum_probs=36.8
Q ss_pred eEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCCCccccCCHHHHHH-HHHHH
Q 022400 214 KAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPSINDVTYPELIE-IMSKV 269 (298)
Q Consensus 214 ~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~PilNDaT~~Da~~-~l~~~ 269 (298)
++++++--+|. ++.- +++.|.+.|.+|+++.|... =|+|-.+... .++++
T Consensus 7 k~vlVTGas~g---IG~~-~a~~l~~~G~~V~~~~r~~~--~D~~~~~~v~~~~~~~ 57 (223)
T 3uce_A 7 TVYVVLGGTSG---IGAE-LAKQLESEHTIVHVASRQTG--LDISDEKSVYHYFETI 57 (223)
T ss_dssp EEEEEETTTSH---HHHH-HHHHHCSTTEEEEEESGGGT--CCTTCHHHHHHHHHHH
T ss_pred CEEEEECCCCH---HHHH-HHHHHHHCCCEEEEecCCcc--cCCCCHHHHHHHHHHh
Confidence 44555555555 5997 99999999999999998866 5777777655 55554
No 53
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=27.73 E-value=61 Score=29.89 Aligned_cols=34 Identities=26% Similarity=0.378 Sum_probs=28.7
Q ss_pred CCeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecC
Q 022400 212 WKKAVIFVDNSGADIILGILPFARELLRRGTQVILAAND 250 (298)
Q Consensus 212 ~k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~ 250 (298)
++++++++ +|+ +| ++ |+++.|+..|.+|+++-|+
T Consensus 177 gk~vvVIG--~G~-iV-G~-~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 177 GKKCIVIN--RSE-IV-GR-PLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TCEEEEEC--CCT-TT-HH-HHHHHHHTTSCEEEEECSS
T ss_pred CCEEEEEC--CCc-ch-HH-HHHHHHHHCCCEEEEEeCc
Confidence 68999997 787 43 88 5999999999999999665
No 54
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=27.35 E-value=49 Score=25.61 Aligned_cols=32 Identities=19% Similarity=0.391 Sum_probs=27.3
Q ss_pred CeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecC
Q 022400 213 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAAND 250 (298)
Q Consensus 213 k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~ 250 (298)
+++++++ +|. ++.. +++.|.+.|++|+++-+.
T Consensus 8 ~~viIiG--~G~---~G~~-la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 8 NHALLVG--YGR---VGSL-LGEKLLASDIPLVVIETS 39 (140)
T ss_dssp SCEEEEC--CSH---HHHH-HHHHHHHTTCCEEEEESC
T ss_pred CCEEEEC--cCH---HHHH-HHHHHHHCCCCEEEEECC
Confidence 5788888 687 7996 999999999999998765
No 55
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=27.35 E-value=30 Score=30.59 Aligned_cols=36 Identities=14% Similarity=0.291 Sum_probs=28.8
Q ss_pred eEEEEe-cCCCcchhcchHHHHHHHHhC--CCEEEEEecCC
Q 022400 214 KAVIFV-DNSGADIILGILPFARELLRR--GTQVILAANDL 251 (298)
Q Consensus 214 ~ilyl~-DNaGEdiVfD~lpli~~L~~~--g~~V~lavk~~ 251 (298)
+||++. ++.| |+|+-. |+++.|++. +.+|+++++..
T Consensus 2 ~ILii~~~~iG-D~i~~~-p~l~~Lk~~~P~a~I~~l~~~~ 40 (326)
T 2gt1_A 2 RVLIVKTSSMG-DVLHTL-PALTDAQQAIPGIKFDWVVEEG 40 (326)
T ss_dssp EEEEECCCCHH-HHHHHH-HHHHHHHHHSTTCEEEEEEEGG
T ss_pred eEEEEeccccc-hHHhHH-HHHHHHHHhCCCCEEEEEEehh
Confidence 566665 7778 698877 899999886 89999998754
No 56
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=27.29 E-value=1.1e+02 Score=25.71 Aligned_cols=52 Identities=17% Similarity=0.303 Sum_probs=36.4
Q ss_pred CeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCCCc-------cccCCHHHHHH-HHHHH
Q 022400 213 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPS-------INDVTYPELIE-IMSKV 269 (298)
Q Consensus 213 k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~Pi-------lNDaT~~Da~~-~l~~~ 269 (298)
|++|+.+ =+|. ++.- +++.|.+.|.+|+++.|...- .=|+|-.+... .++++
T Consensus 16 k~vlVTG-as~g---IG~~-ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 75 (247)
T 1uzm_A 16 RSVLVTG-GNRG---IGLA-IAQRLAADGHKVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFTAV 75 (247)
T ss_dssp CEEEETT-TTSH---HHHH-HHHHHHHTTCEEEEEESSSCCCTTSEEEECCTTCHHHHHHHHHHH
T ss_pred CEEEEeC-CCCH---HHHH-HHHHHHHCCCEEEEEeCChHHHHHhcCeeccCCCHHHHHHHHHHH
Confidence 5555544 4454 5997 999999999999999987653 34777665544 55544
No 57
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=26.93 E-value=58 Score=29.58 Aligned_cols=37 Identities=24% Similarity=0.359 Sum_probs=29.5
Q ss_pred CeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecC
Q 022400 213 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAAND 250 (298)
Q Consensus 213 k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~ 250 (298)
++|++-+==+|. .|+=.+.++++|+++|++|+++...
T Consensus 3 ~~i~i~~GGTgG-Hi~palala~~L~~~g~~V~~vg~~ 39 (365)
T 3s2u_A 3 GNVLIMAGGTGG-HVFPALACAREFQARGYAVHWLGTP 39 (365)
T ss_dssp CEEEEECCSSHH-HHHHHHHHHHHHHHTTCEEEEEECS
T ss_pred CcEEEEcCCCHH-HHHHHHHHHHHHHhCCCEEEEEECC
Confidence 578887766777 7776667999999999999987643
No 58
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=26.84 E-value=49 Score=25.33 Aligned_cols=32 Identities=25% Similarity=0.365 Sum_probs=27.0
Q ss_pred CeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecC
Q 022400 213 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAAND 250 (298)
Q Consensus 213 k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~ 250 (298)
+++++++ +|. ++.. +++.|.+.|++|+++-+.
T Consensus 7 ~~v~I~G--~G~---iG~~-la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 7 YEYIVIG--SEA---AGVG-LVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CSEEEEC--CSH---HHHH-HHHHHHHTTCCEEEEESC
T ss_pred CEEEEEC--CCH---HHHH-HHHHHHHCCCeEEEEECC
Confidence 5788888 587 6896 999999999999998764
No 59
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=26.19 E-value=74 Score=26.91 Aligned_cols=52 Identities=17% Similarity=0.249 Sum_probs=35.8
Q ss_pred CeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCCC-------------ccccCCHHHHHH-HHHHH
Q 022400 213 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLP-------------SINDVTYPELIE-IMSKV 269 (298)
Q Consensus 213 k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~P-------------ilNDaT~~Da~~-~l~~~ 269 (298)
|++++.+=+.| ++.- +++.|.+.|.+|+++.|... +.=|+|-.+... .++++
T Consensus 6 k~vlVTGas~g----iG~~-ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 71 (245)
T 1uls_A 6 KAVLITGAAHG----IGRA-TLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEA 71 (245)
T ss_dssp CEEEEESTTSH----HHHH-HHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHH
T ss_pred CEEEEECCCCH----HHHH-HHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHH
Confidence 56666555444 5997 99999999999999988642 224777665544 55544
No 60
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=25.88 E-value=61 Score=26.93 Aligned_cols=35 Identities=20% Similarity=0.191 Sum_probs=26.3
Q ss_pred eEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCCCc
Q 022400 214 KAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPS 253 (298)
Q Consensus 214 ~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~Pi 253 (298)
++|+.+- +|. ++.- +++.|++.|++|+++.|...-
T Consensus 3 ~vlVtGa-sg~---iG~~-l~~~L~~~g~~V~~~~r~~~~ 37 (255)
T 2dkn_A 3 VIAITGS-ASG---IGAA-LKELLARAGHTVIGIDRGQAD 37 (255)
T ss_dssp EEEEETT-TSH---HHHH-HHHHHHHTTCEEEEEESSSSS
T ss_pred EEEEeCC-CcH---HHHH-HHHHHHhCCCEEEEEeCChhH
Confidence 4555544 454 5897 999999999999999987653
No 61
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=25.86 E-value=67 Score=27.74 Aligned_cols=40 Identities=28% Similarity=0.468 Sum_probs=27.8
Q ss_pred EecCCCcchhcchHHHHHHHHhCCCEEEEEecCCCccccCCHHHH
Q 022400 218 FVDNSGADIILGILPFARELLRRGTQVILAANDLPSINDVTYPEL 262 (298)
Q Consensus 218 l~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~PilNDaT~~Da 262 (298)
++==+|. ++.- |++.|++.|++|+..+|. |--.+++..++
T Consensus 5 VTGatGf---IG~~-L~~~L~~~G~~V~~l~R~-~~~~~~~~~~~ 44 (298)
T 4b4o_A 5 VGGGTGF---IGTA-LTQLLNARGHEVTLVSRK-PGPGRITWDEL 44 (298)
T ss_dssp EETTTSH---HHHH-HHHHHHHTTCEEEEEESS-CCTTEEEHHHH
T ss_pred EECCCCH---HHHH-HHHHHHHCCCEEEEEECC-CCcCeeecchh
Confidence 3344565 6886 999999999999998884 44445554444
No 62
>1ydm_A Hypothetical protein YQGN; northeast structural genomics, SR44, X-RAY, PSI, protein structure initiative; 2.50A {Bacillus subtilis}
Probab=25.69 E-value=60 Score=27.10 Aligned_cols=33 Identities=12% Similarity=0.170 Sum_probs=29.5
Q ss_pred CCeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEE
Q 022400 212 WKKAVIFVDNSGADIILGILPFARELLRRGTQVILA 247 (298)
Q Consensus 212 ~k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~la 247 (298)
+++|......-|| .|..|+++.+++.|.+|++=
T Consensus 41 a~~I~~y~~~~~E---vdt~~li~~~~~~gk~v~lP 73 (187)
T 1ydm_A 41 AGTIAVTISRGLE---IPTRPVIEQAWEEGKQVCIP 73 (187)
T ss_dssp CSEEECCCCCTTS---CCCHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEECCCCCC---CCHHHHHHHHHHCCCEEEEe
Confidence 7899988888999 68889999999999999874
No 63
>2ts1_A Tyrosyl-tRNA synthetase; ligase (synthetase); 2.30A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 3ts1_A* 1tyd_E* 1tya_E* 1tyc_A 1tyb_E* 4ts1_A* 1jh3_A
Probab=25.65 E-value=2.5e+02 Score=26.69 Aligned_cols=69 Identities=13% Similarity=0.151 Sum_probs=45.6
Q ss_pred CCCHHHHHHHhcccCCCeEEEEe-cCCCcchhcchHH---HHHHHHhCCCEEEEEecCCCc-cccC----------CHHH
Q 022400 197 IDDLETFKVKWSKKAWKKAVIFV-DNSGADIILGILP---FARELLRRGTQVILAANDLPS-INDV----------TYPE 261 (298)
Q Consensus 197 ~dd~~~~~~~L~~~~~k~ilyl~-DNaGEdiVfD~lp---li~~L~~~g~~V~lavk~~Pi-lNDa----------T~~D 261 (298)
+.+.+++.+.|.+ .+..+|.+ |-+|.++-++=+. ..+.|++.|+++++.+=+.-. ++|. |.++
T Consensus 16 ~~~~~~L~~~L~~--~~~~iy~G~dPTg~sLHlGh~v~l~~l~~lQ~~G~~~i~lIgd~ta~igdpsgk~~~R~~l~~e~ 93 (419)
T 2ts1_A 16 TTDEDGLRKLLNE--ERVTLYCGFDPTADSLHIGHLATILTMRRFQQAGHRPIALVGGATGLIGDPSGKKSERTLNAKET 93 (419)
T ss_dssp ESCHHHHHHHHHH--SCCEEEEEECCSSSSCBGGGHHHHHHHHHHHHTTCEEEEEECTTGGGTCCCTTCSSCCCCCCHHH
T ss_pred cCCHHHHHHHHcC--CCCEEEEeeCCCCCCccHHHHHHHHHHHHHHHCCCcEEEEEcCceeEecCCCCccccccCCCHHH
Confidence 3567788888865 23455555 9999667777442 234456669998877766654 7887 7777
Q ss_pred HHHHHH
Q 022400 262 LIEIMS 267 (298)
Q Consensus 262 a~~~l~ 267 (298)
+.....
T Consensus 94 i~~n~~ 99 (419)
T 2ts1_A 94 VEAWSA 99 (419)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776443
No 64
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=25.49 E-value=1.3e+02 Score=25.26 Aligned_cols=52 Identities=13% Similarity=0.197 Sum_probs=36.3
Q ss_pred CeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCCC--------ccccCCHHHHHH-HHHHH
Q 022400 213 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLP--------SINDVTYPELIE-IMSKV 269 (298)
Q Consensus 213 k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~P--------ilNDaT~~Da~~-~l~~~ 269 (298)
|++++.+=+ |. ++.- +++.|.+.|.+|+++.|... +.=|+|-.+... .++++
T Consensus 8 k~vlVTGas-~g---iG~~-ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~d~~~~~~~~~~~ 68 (250)
T 2fwm_X 8 KNVWVTGAG-KG---IGYA-TALAFVEAGAKVTGFDQAFTQEQYPFATEVMDVADAAQVAQVCQRL 68 (250)
T ss_dssp CEEEEESTT-SH---HHHH-HHHHHHHTTCEEEEEESCCCSSCCSSEEEECCTTCHHHHHHHHHHH
T ss_pred CEEEEeCCC-cH---HHHH-HHHHHHHCCCEEEEEeCchhhhcCCceEEEcCCCCHHHHHHHHHHH
Confidence 566665554 44 5997 99999999999999988643 234777666544 55544
No 65
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=25.13 E-value=1.6e+02 Score=25.11 Aligned_cols=53 Identities=21% Similarity=0.331 Sum_probs=37.3
Q ss_pred CeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCCCc---------cccCCHHHHHH-HHHHHh
Q 022400 213 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPS---------INDVTYPELIE-IMSKVT 270 (298)
Q Consensus 213 k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~Pi---------lNDaT~~Da~~-~l~~~a 270 (298)
|++| ++-=+|. ++.- +++.|.+.|.+|+++.|...- .=|+|-.+... .++++.
T Consensus 29 k~vl-VTGas~g---IG~a-ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 91 (260)
T 3un1_A 29 KVVV-ITGASQG---IGAG-LVRAYRDRNYRVVATSRSIKPSADPDIHTVAGDISKPETADRIVREGI 91 (260)
T ss_dssp CEEE-ESSCSSH---HHHH-HHHHHHHTTCEEEEEESSCCCCSSTTEEEEESCTTSHHHHHHHHHHHH
T ss_pred CEEE-EeCCCCH---HHHH-HHHHHHHCCCEEEEEeCChhhcccCceEEEEccCCCHHHHHHHHHHHH
Confidence 4555 4444555 5997 999999999999999987543 34888776655 555443
No 66
>3hy3_A 5-formyltetrahydrofolate cyclo-ligase; antifolate, cancer, ATP-binding, binding, magnesium, nucleotide-binding; HET: 10F; 1.80A {Homo sapiens} PDB: 3hxt_A* 3hy4_A* 3hy6_A
Probab=24.99 E-value=59 Score=27.51 Aligned_cols=33 Identities=15% Similarity=0.363 Sum_probs=29.2
Q ss_pred CCeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEE
Q 022400 212 WKKAVIFVDNSGADIILGILPFARELLRRGTQVILA 247 (298)
Q Consensus 212 ~k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~la 247 (298)
+++|......-|| .|..|+|+.+.+.|.+|++=
T Consensus 49 a~~I~~Y~~~~~E---vdt~~li~~~~~~gk~v~lP 81 (203)
T 3hy3_A 49 SKRISIFLSMQDE---IETEEIIKDIFQRGKICFIP 81 (203)
T ss_dssp CSEEECCCCCTTS---CCCHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEEcCCCCC---cCHHHHHHHHHHCCCEEEEE
Confidence 6899999999999 69889999999999998763
No 67
>2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A
Probab=24.94 E-value=1.6e+02 Score=29.65 Aligned_cols=46 Identities=22% Similarity=0.286 Sum_probs=30.1
Q ss_pred CHHHHHHHhcccCCCeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEE
Q 022400 199 DLETFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLRRGTQVILA 247 (298)
Q Consensus 199 d~~~~~~~L~~~~~k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~la 247 (298)
.+++..++++. +.+.|.|++..+=+ .+--. |+++.++++|.+|+++
T Consensus 415 sL~eY~~rmke-~q~~IyY~t~~~~~-~~~~s-p~~e~~~~kg~eVl~~ 460 (624)
T 2ioq_A 415 SLEDYVSRMKE-GQEKIYYITADSYA-AAKSS-PHLELLRKKGIEVLLL 460 (624)
T ss_dssp CHHHHHTTCCT-TCCSEEEEECSSHH-HHHHC-HHHHHHHHHTCCCEEE
T ss_pred eHHHHHHhccc-cCceEEEEeCCCHH-HHhhC-hHHHHHHhCCceEEEe
Confidence 34555555543 36789999876654 54444 7888888778777765
No 68
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=24.87 E-value=1.3e+02 Score=25.74 Aligned_cols=52 Identities=21% Similarity=0.314 Sum_probs=36.5
Q ss_pred CeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCCC-------ccccCCHHHHHH-HHHHH
Q 022400 213 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLP-------SINDVTYPELIE-IMSKV 269 (298)
Q Consensus 213 k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~P-------ilNDaT~~Da~~-~l~~~ 269 (298)
|++|+.+-+ |. ++.- +++.|.+.|.+|+++.|... +.=|+|-.+... .++++
T Consensus 9 k~vlVTGas-~g---IG~~-ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 68 (264)
T 2dtx_A 9 KVVIVTGAS-MG---IGRA-IAERFVDEGSKVIDLSIHDPGEAKYDHIECDVTNPDQVKASIDHI 68 (264)
T ss_dssp CEEEEESCS-SH---HHHH-HHHHHHHTTCEEEEEESSCCCSCSSEEEECCTTCHHHHHHHHHHH
T ss_pred CEEEEeCCC-CH---HHHH-HHHHHHHCCCEEEEEecCcccCCceEEEEecCCCHHHHHHHHHHH
Confidence 566665554 44 5997 99999999999999988642 335887666544 55544
No 69
>1xax_A Hypothetical UPF0054 protein HI0004; structural genomics, MMP, hydrolase, protein structure initiative, S2F, structure 2 function project; NMR {Haemophilus influenzae}
Probab=24.53 E-value=86 Score=25.81 Aligned_cols=67 Identities=16% Similarity=0.105 Sum_probs=31.8
Q ss_pred ccHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhccCCCCCCCCChhHhHHHHHHHHHHHHcCCccchHHHH
Q 022400 51 NSIPSFKKRAESDPTVPDAHVRAEKFAQRYSEILEDMKKDPETHGGPPDCILLCRLREQVLRELGFRDIFKKVK 124 (298)
Q Consensus 51 ~Ci~C~~~qa~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~p~~~~~~~~~r~~~~~~~~~~~~~g~~DPY~~~K 124 (298)
=|++-..+||........ .+.+.-+...++ +|.-++ ..++.....+...-+.++..+|..+||...|
T Consensus 88 Is~~~~~~qA~e~g~s~~-~el~~L~vHG~L-HLlGyD-----H~~~~e~~~M~~~E~~iL~~lg~~~py~~~~ 154 (154)
T 1xax_A 88 ICRQVVEREASEQEKPLM-AHWAHMVVHGSL-HLLGYD-----HIEDDEAEEMESLETQIMQGLGFDDPYLAEK 154 (154)
T ss_dssp ECHHHHHHHHHHHTSCHH-HHHHHHHHHHHH-TTTCCC-----CCTTTHHHHHHHHHHHHHTTTTC--------
T ss_pred EcHHHHHHHHHHcCCCHH-HHHHHHHHHHHH-HhcCCC-----CCCchHHHHHHHHHHHHHHHcCCCCCCccCC
Confidence 388888888865443321 222222232222 222233 2233333466777778999999999998654
No 70
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=24.52 E-value=52 Score=28.38 Aligned_cols=34 Identities=29% Similarity=0.518 Sum_probs=27.0
Q ss_pred CeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCC
Q 022400 213 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDL 251 (298)
Q Consensus 213 k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~ 251 (298)
|++|+.+=+.| ++.- +++.|.+.|.+|+++.|..
T Consensus 13 k~vlITGas~G----IG~~-~a~~L~~~G~~V~~~~r~~ 46 (311)
T 3o26_A 13 RCAVVTGGNKG----IGFE-ICKQLSSNGIMVVLTCRDV 46 (311)
T ss_dssp CEEEESSCSSH----HHHH-HHHHHHHTTCEEEEEESCH
T ss_pred cEEEEecCCch----HHHH-HHHHHHHCCCEEEEEeCCH
Confidence 56666655544 5997 9999999999999999864
No 71
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=24.47 E-value=1.6e+02 Score=24.83 Aligned_cols=35 Identities=23% Similarity=0.304 Sum_probs=26.7
Q ss_pred CeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCCC
Q 022400 213 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLP 252 (298)
Q Consensus 213 k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~P 252 (298)
|++| ++--+|. ++.- +++.|.+.|.+|+++.|...
T Consensus 8 k~~l-VTGas~g---IG~a-ia~~l~~~G~~V~~~~r~~~ 42 (257)
T 3tpc_A 8 RVFI-VTGASSG---LGAA-VTRMLAQEGATVLGLDLKPP 42 (257)
T ss_dssp CEEE-EESTTSH---HHHH-HHHHHHHTTCEEEEEESSCC
T ss_pred CEEE-EeCCCCH---HHHH-HHHHHHHCCCEEEEEeCChH
Confidence 4455 4444555 5997 99999999999999988754
No 72
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=24.39 E-value=2.7e+02 Score=22.13 Aligned_cols=90 Identities=16% Similarity=0.139 Sum_probs=50.2
Q ss_pred HHHHHHHHHHH-HhhhhhhchhhhhhhhccCcccHHHHHhhhcCCCCCCCCHHHHHHHhcccCCCeEEEEecCCCcchhc
Q 022400 150 KRVESLIRGIF-AGNIFDLGSAQLAEVFSKDGMSFLASCQNLVPRPWVIDDLETFKVKWSKKAWKKAVIFVDNSGADIIL 228 (298)
Q Consensus 150 d~l~~a~r~al-aGN~iD~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~~~~~~~L~~~~~k~ilyl~DNaGEdiVf 228 (298)
+.+..+++... +.+++=+|.....-+ -..+...+.++-..-....+.. ......+.++++..++|+ - -
T Consensus 25 ~~i~~~~~~i~~a~~I~i~G~G~S~~~----A~~~~~~l~~~g~~~~~~~~~~-----~~~~~~~d~vI~iS~sG~-t-~ 93 (186)
T 1m3s_A 25 EEADQLADHILSSHQIFTAGAGRSGLM----AKSFAMRLMHMGFNAHIVGEIL-----TPPLAEGDLVIIGSGSGE-T-K 93 (186)
T ss_dssp HHHHHHHHHHHHCSCEEEECSHHHHHH----HHHHHHHHHHTTCCEEETTSTT-----CCCCCTTCEEEEECSSSC-C-H
T ss_pred HHHHHHHHHHHcCCeEEEEecCHHHHH----HHHHHHHHHhcCCeEEEeCccc-----ccCCCCCCEEEEEcCCCC-c-H
Confidence 45666666554 455556676432111 1233333333211112222321 122225689999999998 4 3
Q ss_pred chHHHHHHHHhCCCEEEEEecC
Q 022400 229 GILPFARELLRRGTQVILAAND 250 (298)
Q Consensus 229 D~lpli~~L~~~g~~V~lavk~ 250 (298)
+.+-.++.++++|.+|+.....
T Consensus 94 ~~~~~~~~ak~~g~~vi~IT~~ 115 (186)
T 1m3s_A 94 SLIHTAAKAKSLHGIVAALTIN 115 (186)
T ss_dssp HHHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHHCCCEEEEEECC
Confidence 4445788889999999888764
No 73
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=24.28 E-value=1.4e+02 Score=25.23 Aligned_cols=35 Identities=14% Similarity=0.178 Sum_probs=27.7
Q ss_pred CeEEEEecCC-CcchhcchHHHHHHHHhCCCEEEEEecCC
Q 022400 213 KKAVIFVDNS-GADIILGILPFARELLRRGTQVILAANDL 251 (298)
Q Consensus 213 k~ilyl~DNa-GEdiVfD~lpli~~L~~~g~~V~lavk~~ 251 (298)
|++|+.+-.+ |. ++.- +++.|.+.|.+|+++.|..
T Consensus 10 k~vlVTGas~~~g---IG~~-ia~~l~~~G~~V~~~~r~~ 45 (265)
T 1qsg_A 10 KRILVTGVASKLS---IAYG-IAQAMHREGAELAFTYQND 45 (265)
T ss_dssp CEEEECCCCSTTS---HHHH-HHHHHHHTTCEEEEEESST
T ss_pred CEEEEECCCCCCC---HHHH-HHHHHHHCCCEEEEEcCcH
Confidence 6676666552 55 5997 9999999999999998864
No 74
>3h11_A CAsp8 and FADD-like apoptosis regulator; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} PDB: 3h13_A
Probab=24.21 E-value=94 Score=27.81 Aligned_cols=68 Identities=10% Similarity=0.059 Sum_probs=48.7
Q ss_pred CCeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCCCccccCCHHHHHHHHHHHhhh----------hhhhhhccc
Q 022400 212 WKKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPSINDVTYPELIEIMSKVTEN----------MKIKSKSYN 281 (298)
Q Consensus 212 ~k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~PilNDaT~~Da~~~l~~~a~v----------~~il~~~~~ 281 (298)
.+.+.+|..|.|.| .--|.+.|.+.|.+|++ .+|.|.+|+...|.+++.. +=+++++.+
T Consensus 42 ~rG~~LIinn~~~D----~~~L~~~f~~LgF~V~~-------~~dlt~~em~~~l~~~~~~~dh~~~d~~v~~ilSHG~~ 110 (272)
T 3h11_A 42 PLGICLIIDCIGNE----TELLRDTFTSLGYEVQK-------FLHLSMHGISQILGQFACMPEHRDYDSFVCVLVSRGGS 110 (272)
T ss_dssp SSEEEEEEESSCCC----CSHHHHHHHHHTEEEEE-------EESCBHHHHHHHHHHHHTCGGGGGCSEEEEEEEEEEET
T ss_pred cceEEEEECCchHH----HHHHHHHHHHCCCEEEE-------eeCCCHHHHHHHHHHHHhccccCCCCEEEEEEEcCCCC
Confidence 45677888899864 43367778888999875 4899999999999998863 235666666
Q ss_pred ccccccCCC
Q 022400 282 YFFFLDDYN 290 (298)
Q Consensus 282 ~~~~~~~~~ 290 (298)
+..+=.|..
T Consensus 111 g~i~g~D~~ 119 (272)
T 3h11_A 111 QSVYGVDQT 119 (272)
T ss_dssp TEECBTSCC
T ss_pred CeEEEEcCC
Confidence 555545543
No 75
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=23.96 E-value=62 Score=23.34 Aligned_cols=34 Identities=24% Similarity=0.274 Sum_probs=27.8
Q ss_pred CCeEEEEecCCCcchhcchHHHHHHHHhCC-CEEEEEecCC
Q 022400 212 WKKAVIFVDNSGADIILGILPFARELLRRG-TQVILAANDL 251 (298)
Q Consensus 212 ~k~ilyl~DNaGEdiVfD~lpli~~L~~~g-~~V~lavk~~ 251 (298)
.+++++++= |. ++.. +++.|.+.| ++|+++.|..
T Consensus 5 ~~~v~I~G~--G~---iG~~-~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGA--GK---IGQM-IAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECC--SH---HHHH-HHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECC--CH---HHHH-HHHHHHhCCCceEEEEeCCH
Confidence 367888874 76 6896 999999999 8999988863
No 76
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=23.88 E-value=88 Score=26.34 Aligned_cols=34 Identities=26% Similarity=0.382 Sum_probs=26.9
Q ss_pred CeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCC
Q 022400 213 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDL 251 (298)
Q Consensus 213 k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~ 251 (298)
|++|+.+=+.| ++.- +++.|.+.|.+|+++.|..
T Consensus 4 k~vlVTGas~G----IG~a-~a~~l~~~G~~V~~~~r~~ 37 (235)
T 3l6e_A 4 GHIIVTGAGSG----LGRA-LTIGLVERGHQVSMMGRRY 37 (235)
T ss_dssp CEEEEESTTSH----HHHH-HHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCCH----HHHH-HHHHHHHCCCEEEEEECCH
Confidence 55666655544 5997 9999999999999999874
No 77
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=23.88 E-value=3e+02 Score=22.47 Aligned_cols=37 Identities=8% Similarity=0.250 Sum_probs=28.8
Q ss_pred CCeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecC
Q 022400 212 WKKAVIFVDNSGADIILGILPFARELLRRGTQVILAAND 250 (298)
Q Consensus 212 ~k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~ 250 (298)
.+.++++..++|+ -- +.+-+++.++++|.+|+.....
T Consensus 89 ~~DvvI~iS~SG~-t~-~~i~~~~~ak~~g~~vI~IT~~ 125 (200)
T 1vim_A 89 DQDVLVGISGSGE-TT-SVVNISKKAKDIGSKLVAVTGK 125 (200)
T ss_dssp TTCEEEEECSSSC-CH-HHHHHHHHHHHHTCEEEEEESC
T ss_pred CCCEEEEEeCCCC-cH-HHHHHHHHHHHCCCeEEEEECC
Confidence 4679999999998 43 3444778888889999888764
No 78
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=23.52 E-value=2e+02 Score=26.49 Aligned_cols=61 Identities=18% Similarity=0.210 Sum_probs=40.2
Q ss_pred CCHHHHHHHhcccCCCeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCCCccccCCHHHHHH
Q 022400 198 DDLETFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPSINDVTYPELIE 264 (298)
Q Consensus 198 dd~~~~~~~L~~~~~k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~PilNDaT~~Da~~ 264 (298)
++...+.+.+.....+++++++ +|. .+.- ++..|.+.|.+|+++.++..++...--.++..
T Consensus 134 ~~~~~~~~~~~~~~~~~vvViG--gG~---~g~E-~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~ 194 (449)
T 3kd9_A 134 PDALAIREYMEKYKVENVVIIG--GGY---IGIE-MAEAFAAQGKNVTMIVRGERVLRRSFDKEVTD 194 (449)
T ss_dssp HHHHHHHHHHSSSCCCEEEEEC--CSH---HHHH-HHHHHHHTTCEEEEEESSSSTTTTTSCHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEC--CCH---HHHH-HHHHHHhCCCeEEEEEcCCccchhhcCHHHHH
Confidence 3444555555422367999986 444 3554 78899999999999999887775533344443
No 79
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=23.24 E-value=1.3e+02 Score=25.87 Aligned_cols=35 Identities=29% Similarity=0.370 Sum_probs=27.5
Q ss_pred CeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCCC
Q 022400 213 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLP 252 (298)
Q Consensus 213 k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~P 252 (298)
|++|+.+=+.| ++.- +++.|.+.|.+|+++.|...
T Consensus 7 k~~lVTGas~G----IG~a-ia~~la~~G~~V~~~~r~~~ 41 (274)
T 3e03_A 7 KTLFITGASRG----IGLA-IALRAARDGANVAIAAKSAV 41 (274)
T ss_dssp CEEEEETTTSH----HHHH-HHHHHHHTTCEEEEEESCCS
T ss_pred cEEEEECCCCh----HHHH-HHHHHHHCCCEEEEEeccch
Confidence 56666555544 5997 99999999999999998754
No 80
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=22.91 E-value=88 Score=26.58 Aligned_cols=34 Identities=29% Similarity=0.279 Sum_probs=26.4
Q ss_pred CeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCC
Q 022400 213 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDL 251 (298)
Q Consensus 213 k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~ 251 (298)
|++|+.+=+ |. ++.- +++.|.+.|.+|+++.|..
T Consensus 6 k~vlVTGas-~g---IG~~-ia~~l~~~G~~V~~~~r~~ 39 (254)
T 1hdc_A 6 KTVIITGGA-RG---LGAE-AARQAVAAGARVVLADVLD 39 (254)
T ss_dssp SEEEEETTT-SH---HHHH-HHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCC-cH---HHHH-HHHHHHHCCCEEEEEeCCH
Confidence 556655544 44 5997 9999999999999998864
No 81
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=22.86 E-value=95 Score=27.67 Aligned_cols=39 Identities=13% Similarity=0.067 Sum_probs=26.2
Q ss_pred CeEEEEecC-----CCcchhcchHHHHHHHHhCCCEEEEEecCCC
Q 022400 213 KKAVIFVDN-----SGADIILGILPFARELLRRGTQVILAANDLP 252 (298)
Q Consensus 213 k~ilyl~DN-----aGEdiVfD~lpli~~L~~~g~~V~lavk~~P 252 (298)
=+|++++.. .|.--..=. -+++.|.++|++|++++-..+
T Consensus 3 MkIl~v~~~~~p~~~gG~~~~~~-~la~~L~~~G~~V~v~~~~~~ 46 (439)
T 3fro_A 3 MKVLLLGFEFLPVKVGGLAEALT-AISEALASLGHEVLVFTPSHG 46 (439)
T ss_dssp CEEEEECSCCTTSCSSSHHHHHH-HHHHHHHHTTCEEEEEEECTT
T ss_pred eEEEEEecccCCcccCCHHHHHH-HHHHHHHHCCCeEEEEecCCC
Confidence 378998854 333122223 278999999999999985443
No 82
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=22.85 E-value=74 Score=26.72 Aligned_cols=37 Identities=16% Similarity=0.069 Sum_probs=27.5
Q ss_pred CeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCCCcc
Q 022400 213 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPSI 254 (298)
Q Consensus 213 k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~Pil 254 (298)
|++|+.+= +|. ++.- +++.|.+.|.+|+++.|...-+
T Consensus 2 k~vlVTGa-s~g---IG~~-~a~~l~~~G~~V~~~~r~~~~~ 38 (257)
T 1fjh_A 2 SIIVISGC-ATG---IGAA-TRKVLEAAGHQIVGIDIRDAEV 38 (257)
T ss_dssp CEEEEETT-TSH---HHHH-HHHHHHHTTCEEEEEESSSSSE
T ss_pred CEEEEeCC-CCH---HHHH-HHHHHHHCCCEEEEEeCCchhh
Confidence 34555444 444 5897 9999999999999999876543
No 83
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=22.84 E-value=1.3e+02 Score=22.71 Aligned_cols=49 Identities=16% Similarity=0.132 Sum_probs=28.4
Q ss_pred HHHHHHHhcccCCCeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCC
Q 022400 200 LETFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDL 251 (298)
Q Consensus 200 ~~~~~~~L~~~~~k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~ 251 (298)
++.|.+.+...+..+-+++..++|. --.-.. .+..|.+.|.+ ++.++|+
T Consensus 58 ~~~l~~~~~~l~~~~~ivvyC~~g~-r~~s~~-a~~~L~~~G~~-v~~l~GG 106 (124)
T 3flh_A 58 AKDLATRIGELDPAKTYVVYDWTGG-TTLGKT-ALLVLLSAGFE-AYELAGA 106 (124)
T ss_dssp HHHHHHHGGGSCTTSEEEEECSSSS-CSHHHH-HHHHHHHHTCE-EEEETTH
T ss_pred HHHHHHHHhcCCCCCeEEEEeCCCC-chHHHH-HHHHHHHcCCe-EEEeCCc
Confidence 3445555543223344555566775 211244 78888889999 6667765
No 84
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=22.47 E-value=1.4e+02 Score=24.43 Aligned_cols=52 Identities=23% Similarity=0.241 Sum_probs=36.6
Q ss_pred CeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCCC------ccccCCHHHHHH-HHHHH
Q 022400 213 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLP------SINDVTYPELIE-IMSKV 269 (298)
Q Consensus 213 k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~P------ilNDaT~~Da~~-~l~~~ 269 (298)
|++|+.+- +|. ++.- +++.|.+.|.+|+++.|... +.=|+|-.+... .++++
T Consensus 3 k~vlVtGa-sgg---iG~~-la~~l~~~G~~V~~~~r~~~~~~~~~~~~D~~~~~~~~~~~~~~ 61 (242)
T 1uay_A 3 RSALVTGG-ASG---LGRA-AALALKARGYRVVVLDLRREGEDLIYVEGDVTREEDVRRAVARA 61 (242)
T ss_dssp CEEEEETT-TSH---HHHH-HHHHHHHHTCEEEEEESSCCSSSSEEEECCTTCHHHHHHHHHHH
T ss_pred CEEEEeCC-CCh---HHHH-HHHHHHHCCCEEEEEccCccccceEEEeCCCCCHHHHHHHHHHH
Confidence 55665554 454 5997 99999999999999998864 334777665544 55544
No 85
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=22.21 E-value=1e+02 Score=23.18 Aligned_cols=63 Identities=16% Similarity=0.139 Sum_probs=49.2
Q ss_pred HHHHHHhC-CCEEEEE--ecCCCc--cccCCHHHHHHHHHHHhhhhhhhhhcccccccccCCCccccc
Q 022400 233 FARELLRR-GTQVILA--ANDLPS--INDVTYPELIEIMSKVTENMKIKSKSYNYFFFLDDYNVVPIS 295 (298)
Q Consensus 233 li~~L~~~-g~~V~la--vk~~Pi--lNDaT~~Da~~~l~~~a~v~~il~~~~~~~~~~~~~~~~~~~ 295 (298)
+.+.|+.. |.+|..+ ..|+-+ +..-+.+++.+.+.++-.+.-|++.++-|.++=.+....|-|
T Consensus 22 V~~~L~~ipgvEi~~~~~~~GkiVV~iEa~~~~~l~~~i~~I~~i~GVlst~lvy~~~e~~~~~~~~~ 89 (95)
T 2jsx_A 22 ISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIESVRNVEGVLAVSLVYHQQEEQGEETPRS 89 (95)
T ss_dssp HHHHHTTSTTEEEEEEETTTTEEEEEEEESSHHHHHHHHHHHTTSTTEEEEEESSCCCCCCCCSSCCC
T ss_pred HHHHHHCCCCeEEEEecCCCCCEEEEEEeCCHHHHHHHHHHHhcCCCccEEeEEEEEecccccccccc
Confidence 45666666 7877554 355555 788899999998899999999999999999987777766654
No 86
>1sbq_A H91_ORF164, 5,10-methenyltetrahydrofolate synthetase homolog; MTHFS, 5- formyltetrahydrofolate cyclo-ligase, structural genomics; 2.20A {Mycoplasma pneumoniae} SCOP: c.124.1.6 PDB: 1u3f_A* 1u3g_A*
Probab=22.02 E-value=80 Score=26.64 Aligned_cols=33 Identities=12% Similarity=0.238 Sum_probs=28.8
Q ss_pred CCeEEEEecCCCcchhcchHHHHHHHHhCCC-EEEEE
Q 022400 212 WKKAVIFVDNSGADIILGILPFARELLRRGT-QVILA 247 (298)
Q Consensus 212 ~k~ilyl~DNaGEdiVfD~lpli~~L~~~g~-~V~la 247 (298)
+++|......-|| .|..|+++.+++.|. +|++=
T Consensus 68 a~~I~~Y~~~~~E---vdt~~li~~~~~~gk~~v~lP 101 (189)
T 1sbq_A 68 IKTIALYEPIKNE---VTFVDFFFEFLKINQIRAVYP 101 (189)
T ss_dssp CCEEECCCCCTTS---CCCCHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEECCCCCC---CCHHHHHHHHHHcCCCeEEEe
Confidence 7899999999999 677789999999999 98873
No 87
>2jcb_A 5-formyltetrahydrofolate cyclo-ligase family PROT; folate metabolism; HET: ADP; 1.6A {Bacillus anthracis}
Probab=21.93 E-value=74 Score=27.01 Aligned_cols=33 Identities=15% Similarity=0.275 Sum_probs=29.3
Q ss_pred CCeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEE
Q 022400 212 WKKAVIFVDNSGADIILGILPFARELLRRGTQVILA 247 (298)
Q Consensus 212 ~k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~la 247 (298)
+++|......-|| .|..|+++.+++.|.+|++=
T Consensus 52 a~~I~~Y~~~~~E---vdt~~li~~~~~~gk~v~lP 84 (200)
T 2jcb_A 52 AKTIGITLSMENE---VNTYPIIEKAWKEGKRVVVP 84 (200)
T ss_dssp CSEEECCCCCTTS---CCCHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEECCCCCC---CCHHHHHHHHHHCCCEEEEe
Confidence 6889888888999 68889999999999998874
No 88
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=21.80 E-value=1.6e+02 Score=24.45 Aligned_cols=33 Identities=30% Similarity=0.452 Sum_probs=26.0
Q ss_pred CeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecC
Q 022400 213 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAAND 250 (298)
Q Consensus 213 k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~ 250 (298)
+++++ +-=+|. ++.- +++.|.+.|.+|+++.|.
T Consensus 8 k~vlV-TGasgg---iG~~-~a~~l~~~G~~V~~~~r~ 40 (258)
T 3afn_B 8 KRVLI-TGSSQG---IGLA-TARLFARAGAKVGLHGRK 40 (258)
T ss_dssp CEEEE-TTCSSH---HHHH-HHHHHHHTTCEEEEEESS
T ss_pred CEEEE-eCCCCh---HHHH-HHHHHHHCCCEEEEECCC
Confidence 55554 444555 5997 999999999999999987
No 89
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=21.75 E-value=1.6e+02 Score=25.37 Aligned_cols=35 Identities=17% Similarity=0.119 Sum_probs=27.4
Q ss_pred CCeEEEEecC--CCcchhcchHHHHHHHHhCCCEEEEEecCC
Q 022400 212 WKKAVIFVDN--SGADIILGILPFARELLRRGTQVILAANDL 251 (298)
Q Consensus 212 ~k~ilyl~DN--aGEdiVfD~lpli~~L~~~g~~V~lavk~~ 251 (298)
.|++|+.+=. .| ++.- +++.|.+.|.+|+++.|..
T Consensus 26 ~k~vlVTGasg~~G----IG~~-ia~~l~~~G~~V~~~~r~~ 62 (280)
T 3nrc_A 26 GKKILITGLLSNKS----IAYG-IAKAMHREGAELAFTYVGQ 62 (280)
T ss_dssp TCEEEECCCCSTTC----HHHH-HHHHHHHTTCEEEEEECTT
T ss_pred CCEEEEECCCCCCC----HHHH-HHHHHHHcCCEEEEeeCch
Confidence 3667766633 44 4886 9999999999999998875
No 90
>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate syntha structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824}
Probab=21.73 E-value=1.3e+02 Score=27.30 Aligned_cols=58 Identities=5% Similarity=0.044 Sum_probs=35.5
Q ss_pred HHHHHHhcccCCCeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEe-cCCCccccCCHHHHHHH
Q 022400 201 ETFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLRRGTQVILAA-NDLPSINDVTYPELIEI 265 (298)
Q Consensus 201 ~~~~~~L~~~~~k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lav-k~~PilNDaT~~Da~~~ 265 (298)
+.+.+.+.+.+.+++++++|..-.+...+. +.+.|.+.|.++.+.. .+.| |.+.+.++
T Consensus 23 ~~l~~~l~~~g~~~~livtd~~~~~~~~~~--v~~~L~~~g~~~~~~~~~~~~-----~~~~v~~~ 81 (354)
T 3ce9_A 23 YNIGQIIKKGNFKRVSLYFGEGIYELFGET--IEKSIKSSNIEIEAVETVKNI-----DFDEIGTN 81 (354)
T ss_dssp GGHHHHHGGGTCSEEEEEEETTHHHHHHHH--HHHHHHTTTCEEEEEEEECCC-----BHHHHHHH
T ss_pred HHHHHHHHhcCCCeEEEEECccHHHHHHHH--HHHHHHHcCCeEEEEecCCCC-----CHHHHHHH
Confidence 334444443234799999986543344444 5667777788887665 4444 77776554
No 91
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=21.64 E-value=1.8e+02 Score=25.16 Aligned_cols=35 Identities=29% Similarity=0.284 Sum_probs=26.9
Q ss_pred CeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCCC
Q 022400 213 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLP 252 (298)
Q Consensus 213 k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~P 252 (298)
|++|+.+=+ |. ++.- +++.|.+.|.+|+++.|...
T Consensus 33 k~~lVTGas-~G---IG~a-ia~~la~~G~~V~~~~r~~~ 67 (276)
T 3r1i_A 33 KRALITGAS-TG---IGKK-VALAYAEAGAQVAVAARHSD 67 (276)
T ss_dssp CEEEEESTT-SH---HHHH-HHHHHHHTTCEEEEEESSGG
T ss_pred CEEEEeCCC-CH---HHHH-HHHHHHHCCCEEEEEeCCHH
Confidence 555555544 44 5997 99999999999999998653
No 92
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=21.50 E-value=90 Score=28.15 Aligned_cols=38 Identities=16% Similarity=0.217 Sum_probs=26.5
Q ss_pred CCeEEEEecC------------CCcchhcchHHHHHHHHhCCCEEEEEecCC
Q 022400 212 WKKAVIFVDN------------SGADIILGILPFARELLRRGTQVILAANDL 251 (298)
Q Consensus 212 ~k~ilyl~DN------------aGEdiVfD~lpli~~L~~~g~~V~lavk~~ 251 (298)
..+|++++.+ .|. -..=. -+++.|.++|++|++++...
T Consensus 20 mmkIl~i~~~~~p~~~~~~~~~GG~-~~~~~-~la~~L~~~G~~V~v~~~~~ 69 (438)
T 3c48_A 20 HMRVAMISMHTSPLQQPGTGDSGGM-NVYIL-STATELAKQGIEVDIYTRAT 69 (438)
T ss_dssp CCEEEEECTTSCTTCC-------CH-HHHHH-HHHHHHHHTTCEEEEEEECC
T ss_pred hheeeeEEeeccccccCCCCCCCCH-HHHHH-HHHHHHHhcCCEEEEEecCC
Confidence 4689999973 343 22223 37899999999999887543
No 93
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=21.41 E-value=59 Score=26.12 Aligned_cols=33 Identities=21% Similarity=0.173 Sum_probs=27.6
Q ss_pred CCeEEEEecCCCcchhcchHHHHHHHHhC-CCEEEEEecC
Q 022400 212 WKKAVIFVDNSGADIILGILPFARELLRR-GTQVILAAND 250 (298)
Q Consensus 212 ~k~ilyl~DNaGEdiVfD~lpli~~L~~~-g~~V~lavk~ 250 (298)
.+++++++ +|. ++.. +++.|.+. |++|+++-+.
T Consensus 39 ~~~v~IiG--~G~---~G~~-~a~~L~~~~g~~V~vid~~ 72 (183)
T 3c85_A 39 HAQVLILG--MGR---IGTG-AYDELRARYGKISLGIEIR 72 (183)
T ss_dssp TCSEEEEC--CSH---HHHH-HHHHHHHHHCSCEEEEESC
T ss_pred CCcEEEEC--CCH---HHHH-HHHHHHhccCCeEEEEECC
Confidence 35788887 787 7996 99999999 9999988764
No 94
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=21.36 E-value=1.3e+02 Score=27.53 Aligned_cols=50 Identities=16% Similarity=0.228 Sum_probs=34.7
Q ss_pred CHHHHHHHhcccCCCeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCCCcccc
Q 022400 199 DLETFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPSIND 256 (298)
Q Consensus 199 d~~~~~~~L~~~~~k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~PilND 256 (298)
|...+.+.+.. .+++++++ +|. .+.= ++..|.+.|.+|+++-++..++..
T Consensus 134 ~~~~l~~~~~~--~~~vvViG--gG~---~g~E-~A~~l~~~g~~Vtlv~~~~~~l~~ 183 (408)
T 2gqw_A 134 DARRIQAGLRP--QSRLLIVG--GGV---IGLE-LAATARTAGVHVSLVETQPRLMSR 183 (408)
T ss_dssp HHHHHHTTCCT--TCEEEEEC--CSH---HHHH-HHHHHHHTTCEEEEEESSSSSSTT
T ss_pred HHHHHHHHhhc--CCeEEEEC--CCH---HHHH-HHHHHHhCCCEEEEEEeCCccccc
Confidence 33344444433 68999986 343 3553 788999999999999998777654
No 95
>1pyo_A Caspase-2; apoptosis, caspase, alpha-beta, thiol protease, hydrolase-HY inhibitor complex; 1.65A {Homo sapiens} SCOP: c.17.1.1 PDB: 3rjm_A* 2p2c_A 3r5j_A 3r6g_A 3r6l_A 3r7b_A 3r7n_A 3r7s_A
Probab=21.29 E-value=78 Score=26.23 Aligned_cols=76 Identities=12% Similarity=0.060 Sum_probs=47.5
Q ss_pred CCeEEEEecCCCcc----------hhcchHHHHHHHHhCCCEEEEEecCCCccccCCHHHHHHHHHHHhh-h--------
Q 022400 212 WKKAVIFVDNSGAD----------IILGILPFARELLRRGTQVILAANDLPSINDVTYPELIEIMSKVTE-N-------- 272 (298)
Q Consensus 212 ~k~ilyl~DNaGEd----------iVfD~lpli~~L~~~g~~V~lavk~~PilNDaT~~Da~~~l~~~a~-v-------- 272 (298)
.+.+.+|..|...+ .-.|.--|.+.+.++|.+|.+ .+|.|.+|+...|.+++. .
T Consensus 32 ~rG~aLIinn~~F~~~~~l~~R~Gt~~D~~~L~~~f~~LgF~V~~-------~~dlt~~em~~~l~~~~~~~dh~~~dc~ 104 (167)
T 1pyo_A 32 PRGLALVLSNVHFTGEKELEFRSGGDVDHSTLVTLFKLLGYDVHV-------LCDQTAQEMQEKLQNFAQLPAHRVTDSC 104 (167)
T ss_dssp SSEEEEEEECCCCCSSSCSCCCTTHHHHHHHHHHHHHHTTEEEEE-------EESCCHHHHHHHHHHHHTCGGGGTSSEE
T ss_pred CceEEEEEeCcccCCCCCCccCCCcHHHHHHHHHHHHHCCCEEEE-------eeCCCHHHHHHHHHHhhhhhhccCCCEE
Confidence 35566666665321 122655467777788999875 589999999999998887 2
Q ss_pred -hhhhhhcccccccccCCCcccc
Q 022400 273 -MKIKSKSYNYFFFLDDYNVVPI 294 (298)
Q Consensus 273 -~~il~~~~~~~~~~~~~~~~~~ 294 (298)
+=+++++.++..+=.|...|+|
T Consensus 105 vv~ilSHG~~g~i~g~D~~~v~l 127 (167)
T 1pyo_A 105 IVALLSHGVEGAIYGVDGKLLQL 127 (167)
T ss_dssp EEEEESCEETTEEECTTSCEEEH
T ss_pred EEEeCCCCCCCeEEEeCCCEEcH
Confidence 2245555554444444433443
No 96
>2yxn_A Tyrosyl-tRNA synthetase; tRNA synthetases class I, structural genomics, NPPSFA, natio project on protein structural and functional analyses; HET: AZY; 1.80A {Escherichia coli str} PDB: 1wq3_A* 1wq4_A* 1x8x_A* 1vbn_A* 1vbm_A*
Probab=20.85 E-value=3.5e+02 Score=24.48 Aligned_cols=75 Identities=17% Similarity=0.182 Sum_probs=47.2
Q ss_pred CCCHHHHHHHhcccCCCeEEEEecCCCcchhcchHH---HHHHHHhCCCEEEEEecCCCc-cccC----------CHHHH
Q 022400 197 IDDLETFKVKWSKKAWKKAVIFVDNSGADIILGILP---FARELLRRGTQVILAANDLPS-INDV----------TYPEL 262 (298)
Q Consensus 197 ~dd~~~~~~~L~~~~~k~ilyl~DNaGEdiVfD~lp---li~~L~~~g~~V~lavk~~Pi-lNDa----------T~~Da 262 (298)
+.|.+++.+.|.+. ..+++.=.|-+|.++-++-+. ....|++.|+++++.+=+.-+ ++|. +.+++
T Consensus 19 ~~~~~~l~~~l~~~-~~~vy~G~~PTg~slHlGh~l~l~~~~~lQ~~g~~~~~~i~D~~a~~~dp~g~~~~R~~l~~e~i 97 (322)
T 2yxn_A 19 VTDEEALAERLAQG-PIALVCGFDPTADSLHLGHLVPLLCLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETV 97 (322)
T ss_dssp ESSHHHHHHHHHHS-CCEEEEEECCSSSSCBHHHHHHHHHHHHHHHTTCEEEEEECTTGGGTCCCTTCSSCCCCCCHHHH
T ss_pred eCCHHHHHHHHcCC-CCEEEEeecCCCCcccHHHHHHHHHHHHHHHcCCcEEEEEccceeeecCCCCcccccccCCHHHH
Confidence 45678888888642 234444449999656666431 344566679987777666555 7887 67888
Q ss_pred HH-H---HHHHhhh
Q 022400 263 IE-I---MSKVTEN 272 (298)
Q Consensus 263 ~~-~---l~~~a~v 272 (298)
+. . .+.++.+
T Consensus 98 ~~n~~~~~~~~~~~ 111 (322)
T 2yxn_A 98 QEWVDKIRKQVAPF 111 (322)
T ss_dssp HHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHH
Confidence 77 4 4444443
No 97
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=20.81 E-value=1e+02 Score=26.75 Aligned_cols=53 Identities=19% Similarity=0.246 Sum_probs=36.4
Q ss_pred CeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCCCc---------------cccCCHHHHHH-HHHHHh
Q 022400 213 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPS---------------INDVTYPELIE-IMSKVT 270 (298)
Q Consensus 213 k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~Pi---------------lNDaT~~Da~~-~l~~~a 270 (298)
|++|+.+=+.| ++.- +++.|.+.|.+|+++.|...- .=|+|-.+... .++++.
T Consensus 6 k~~lVTGas~G----IG~a-ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 74 (281)
T 3zv4_A 6 EVALITGGASG----LGRA-LVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCL 74 (281)
T ss_dssp CEEEEETCSSH----HHHH-HHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEECCCcH----HHHH-HHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 55665555544 5997 999999999999999886432 23777655544 555543
No 98
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=20.70 E-value=1.9e+02 Score=24.79 Aligned_cols=54 Identities=28% Similarity=0.318 Sum_probs=36.7
Q ss_pred CCeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCCCc--------cccCCHHHHHH-HHHHHh
Q 022400 212 WKKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPS--------INDVTYPELIE-IMSKVT 270 (298)
Q Consensus 212 ~k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~Pi--------lNDaT~~Da~~-~l~~~a 270 (298)
.|++|+-+=+ |. ++.- +++.|.+.|.+|+++.|.... -=|+|-.+... .++++.
T Consensus 14 ~k~vlVTGas-~G---IG~a-ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 76 (269)
T 3vtz_A 14 DKVAIVTGGS-SG---IGLA-VVDALVRYGAKVVSVSLDEKSDVNVSDHFKIDVTNEEEVKEAVEKTT 76 (269)
T ss_dssp TCEEEESSTT-SH---HHHH-HHHHHHHTTCEEEEEESCC--CTTSSEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEeCCC-CH---HHHH-HHHHHHHCCCEEEEEeCCchhccCceeEEEecCCCHHHHHHHHHHHH
Confidence 3556655544 44 5997 999999999999999886543 24777766555 555543
No 99
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=20.69 E-value=1.7e+02 Score=24.18 Aligned_cols=34 Identities=18% Similarity=0.322 Sum_probs=26.7
Q ss_pred CeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCC
Q 022400 213 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDL 251 (298)
Q Consensus 213 k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~ 251 (298)
|++++.+-+ |. ++.- +++.|.+.|.+|+++.|..
T Consensus 12 k~vlITGas-gg---iG~~-la~~l~~~G~~V~~~~r~~ 45 (254)
T 2wsb_A 12 ACAAVTGAG-SG---IGLE-ICRAFAASGARLILIDREA 45 (254)
T ss_dssp CEEEEETTT-SH---HHHH-HHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCC-cH---HHHH-HHHHHHHCCCEEEEEeCCH
Confidence 566665544 44 5997 9999999999999999863
No 100
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=20.59 E-value=1e+02 Score=28.30 Aligned_cols=51 Identities=16% Similarity=0.264 Sum_probs=36.5
Q ss_pred CCCHHHHHHHhcccCCCeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCCCccc
Q 022400 197 IDDLETFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPSIN 255 (298)
Q Consensus 197 ~dd~~~~~~~L~~~~~k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~PilN 255 (298)
.+|...+.+.+.. .+++++++ +|- .+.= ++..|.+.|.+|+++.++..++.
T Consensus 130 ~~d~~~l~~~~~~--~~~vvViG--gG~---~g~E-~A~~l~~~g~~Vtvv~~~~~~l~ 180 (410)
T 3ef6_A 130 YGDVQVLRDSWTS--ATRLLIVG--GGL---IGCE-VATTARKLGLSVTILEAGDELLV 180 (410)
T ss_dssp HHHHHHHHHHCCT--TCEEEEEC--CSH---HHHH-HHHHHHHTTCEEEEECSSSSSSH
T ss_pred HHHHHHHHHHhcc--CCeEEEEC--CCH---HHHH-HHHHHHhCCCeEEEEecCCccch
Confidence 3455566666654 68999987 444 3553 78889999999999988876653
No 101
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=20.47 E-value=1.2e+02 Score=26.32 Aligned_cols=35 Identities=29% Similarity=0.301 Sum_probs=26.5
Q ss_pred CCeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCC
Q 022400 212 WKKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDL 251 (298)
Q Consensus 212 ~k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~ 251 (298)
.|++|+.+=+ |. ++.- +++.|.+.|.+|+++.|..
T Consensus 24 ~k~~lVTGas-~G---IG~a-ia~~la~~G~~V~~~~r~~ 58 (279)
T 3sju_A 24 PQTAFVTGVS-SG---IGLA-VARTLAARGIAVYGCARDA 58 (279)
T ss_dssp -CEEEEESTT-SH---HHHH-HHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEeCCC-CH---HHHH-HHHHHHHCCCEEEEEeCCH
Confidence 3556655544 44 5997 9999999999999998864
No 102
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=20.45 E-value=1.1e+02 Score=26.45 Aligned_cols=53 Identities=25% Similarity=0.301 Sum_probs=36.5
Q ss_pred CeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCCC------------ccccCCHHHHHH-HHHHHh
Q 022400 213 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLP------------SINDVTYPELIE-IMSKVT 270 (298)
Q Consensus 213 k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~P------------ilNDaT~~Da~~-~l~~~a 270 (298)
|++|+-+= +|. ++.- +++.|.+.|.+|+++.|... +.=|+|-.+... .++++.
T Consensus 17 k~vlVTGa-s~g---IG~a-ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 82 (266)
T 3p19_A 17 KLVVITGA-SSG---IGEA-IARRFSEEGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAE 82 (266)
T ss_dssp CEEEEEST-TSH---HHHH-HHHHHHHTTCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEECC-CCH---HHHH-HHHHHHHCCCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHH
Confidence 45555554 454 5997 99999999999999998643 233777766555 555543
No 103
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=20.41 E-value=2.9e+02 Score=24.72 Aligned_cols=56 Identities=18% Similarity=0.256 Sum_probs=37.0
Q ss_pred HHHHHHhcccCCCeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCCCccccCCHHHHHH
Q 022400 201 ETFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPSINDVTYPELIE 264 (298)
Q Consensus 201 ~~~~~~L~~~~~k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~PilNDaT~~Da~~ 264 (298)
..+.+.+.. .+++++++ +|. .+.- ++..|.+.|.+|+++-++..++....-.++..
T Consensus 136 ~~~~~~~~~--~~~v~ViG--gG~---~g~e-~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~ 191 (384)
T 2v3a_A 136 ARFRQAAAG--KRRVLLLG--AGL---IGCE-FANDLSSGGYQLDVVAPCEQVMPGLLHPAAAK 191 (384)
T ss_dssp HHHHHHHTT--CCEEEEEC--CSH---HHHH-HHHHHHHTTCEEEEEESSSSSSTTTSCHHHHH
T ss_pred HHHHHhhcc--CCeEEEEC--CCH---HHHH-HHHHHHhCCCeEEEEecCcchhhcccCHHHHH
Confidence 334445544 68888884 333 4664 88899999999999998876665433334433
No 104
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=20.33 E-value=92 Score=26.42 Aligned_cols=35 Identities=20% Similarity=0.298 Sum_probs=27.1
Q ss_pred CCeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCC
Q 022400 212 WKKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDL 251 (298)
Q Consensus 212 ~k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~ 251 (298)
.|++|+.+=+ |. ++.- +++.|.+.|.+|+++.|..
T Consensus 19 ~k~vlVTGas-~g---IG~~-~a~~l~~~G~~V~~~~r~~ 53 (249)
T 1o5i_A 19 DKGVLVLAAS-RG---IGRA-VADVLSQEGAEVTICARNE 53 (249)
T ss_dssp TCEEEEESCS-SH---HHHH-HHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCC-CH---HHHH-HHHHHHHCCCEEEEEcCCH
Confidence 3566665554 44 5997 9999999999999998864
No 105
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=20.15 E-value=1.8e+02 Score=24.52 Aligned_cols=34 Identities=21% Similarity=0.240 Sum_probs=26.4
Q ss_pred CeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCC
Q 022400 213 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDL 251 (298)
Q Consensus 213 k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~ 251 (298)
|++|+.+=+ |. ++.- +++.|.+.|.+|+++.|..
T Consensus 7 k~vlVTGas-~g---IG~~-ia~~l~~~G~~V~~~~r~~ 40 (256)
T 2d1y_A 7 KGVLVTGGA-RG---IGRA-IAQAFAREGALVALCDLRP 40 (256)
T ss_dssp CEEEEETTT-SH---HHHH-HHHHHHHTTCEEEEEESST
T ss_pred CEEEEeCCC-CH---HHHH-HHHHHHHCCCEEEEEeCCh
Confidence 556555544 44 5997 9999999999999998874
No 106
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=20.14 E-value=2.3e+02 Score=26.87 Aligned_cols=50 Identities=12% Similarity=0.149 Sum_probs=35.2
Q ss_pred HHHHHHHhcccCCCeEEEEecCCCcchhcchHHHHHHHHhCCCEEEEEecCCCccc
Q 022400 200 LETFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPSIN 255 (298)
Q Consensus 200 ~~~~~~~L~~~~~k~ilyl~DNaGEdiVfD~lpli~~L~~~g~~V~lavk~~PilN 255 (298)
.+.+.+.+.....+++++++ +|. .++- ++..|.+.|.+|+++.++..++.
T Consensus 139 ~~~l~~~~~~~~~~~vvViG--gG~---~g~e-~A~~l~~~g~~Vtlv~~~~~~l~ 188 (565)
T 3ntd_A 139 MDRILQTIQMNNVEHATVVG--GGF---IGLE-MMESLHHLGIKTTLLELADQVMT 188 (565)
T ss_dssp HHHHHHHHHHTTCSEEEEEC--CSH---HHHH-HHHHHHHTTCEEEEEESSSSSCT
T ss_pred HHHHHHHHhhCCCCEEEEEC--CCH---HHHH-HHHHHHhcCCcEEEEEcCCccch
Confidence 34555544433367999987 454 3554 77889999999999999877665
Done!