Query 022401
Match_columns 298
No_of_seqs 129 out of 1752
Neff 10.1
Searched_HMMs 46136
Date Fri Mar 29 03:15:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022401.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/022401hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0581 Mitogen-activated prot 100.0 9.9E-55 2.1E-59 360.3 21.5 258 20-290 76-339 (364)
2 KOG0615 Serine/threonine prote 100.0 5.1E-55 1.1E-59 365.2 17.0 271 11-293 161-444 (475)
3 KOG0575 Polo-like serine/threo 100.0 1.4E-52 3E-57 366.4 26.0 250 23-289 18-272 (592)
4 KOG0598 Ribosomal protein S6 k 100.0 7.1E-52 1.5E-56 343.1 22.6 263 18-292 20-287 (357)
5 KOG0595 Serine/threonine-prote 100.0 7.1E-51 1.5E-55 340.4 20.9 260 19-291 6-273 (429)
6 KOG0583 Serine/threonine prote 100.0 3.6E-49 7.8E-54 343.9 26.5 258 19-291 13-280 (370)
7 KOG0592 3-phosphoinositide-dep 100.0 1.2E-49 2.6E-54 343.2 21.2 257 19-292 69-344 (604)
8 KOG0593 Predicted protein kina 100.0 6.7E-50 1.4E-54 322.7 16.4 258 23-291 2-289 (396)
9 KOG0588 Serine/threonine prote 100.0 1.3E-48 2.7E-53 343.7 20.8 254 22-291 11-268 (786)
10 KOG0616 cAMP-dependent protein 100.0 3.1E-48 6.7E-53 312.1 19.2 258 20-291 41-302 (355)
11 KOG0591 NIMA (never in mitosis 100.0 4.4E-50 9.6E-55 320.7 8.0 253 18-277 14-280 (375)
12 KOG0198 MEKK and related serin 100.0 4.3E-48 9.3E-53 325.1 20.4 259 22-293 16-283 (313)
13 KOG0661 MAPK related serine/th 100.0 2.4E-49 5.1E-54 336.5 12.6 264 19-293 6-298 (538)
14 KOG0192 Tyrosine kinase specif 100.0 2E-47 4.3E-52 330.2 23.6 255 16-279 34-300 (362)
15 KOG0597 Serine-threonine prote 100.0 1.5E-48 3.3E-53 337.6 16.4 251 23-291 2-256 (808)
16 KOG0585 Ca2+/calmodulin-depend 100.0 2.2E-48 4.8E-53 330.5 16.9 261 18-292 92-378 (576)
17 KOG0578 p21-activated serine/t 100.0 5E-48 1.1E-52 335.3 18.9 253 23-290 273-527 (550)
18 KOG0605 NDR and related serine 100.0 5E-47 1.1E-51 326.9 22.7 263 19-292 137-451 (550)
19 cd05631 STKc_GRK4 Catalytic do 100.0 2.3E-46 4.9E-51 319.6 26.3 263 24-294 1-269 (285)
20 cd05612 STKc_PRKX_like Catalyt 100.0 4.6E-47 1E-51 324.8 21.8 256 23-292 1-260 (291)
21 PTZ00263 protein kinase A cata 100.0 1.6E-46 3.4E-51 326.8 23.4 257 21-291 16-276 (329)
22 KOG0600 Cdc2-related protein k 100.0 3E-47 6.4E-52 325.9 17.7 259 20-289 114-403 (560)
23 KOG0659 Cdk activating kinase 100.0 2.8E-46 6.1E-51 296.6 20.1 258 23-291 2-286 (318)
24 KOG0582 Ste20-like serine/thre 100.0 9.7E-46 2.1E-50 312.4 24.2 263 14-290 17-297 (516)
25 cd05571 STKc_PKB Catalytic dom 100.0 7.1E-46 1.5E-50 321.9 22.1 251 29-291 1-256 (323)
26 cd07869 STKc_PFTAIRE1 Catalyti 100.0 3E-45 6.5E-50 315.3 25.4 261 22-293 4-295 (303)
27 KOG0033 Ca2+/calmodulin-depend 100.0 4.1E-48 8.9E-53 304.0 6.7 257 22-291 10-272 (355)
28 cd07871 STKc_PCTAIRE3 Catalyti 100.0 4.2E-45 9.2E-50 312.2 25.0 258 21-289 3-288 (288)
29 PTZ00426 cAMP-dependent protei 100.0 2.9E-45 6.3E-50 319.8 24.4 262 16-291 23-289 (340)
30 cd06649 PKc_MEK2 Catalytic dom 100.0 1.1E-44 2.4E-49 315.5 27.9 259 21-292 3-307 (331)
31 KOG0032 Ca2+/calmodulin-depend 100.0 3.2E-45 7E-50 319.0 24.1 262 18-293 30-300 (382)
32 KOG0197 Tyrosine kinases [Sign 100.0 7.4E-46 1.6E-50 320.6 19.5 251 15-274 198-453 (468)
33 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.2E-45 2.5E-50 324.1 21.0 254 23-292 1-291 (350)
34 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 4E-45 8.8E-50 318.6 23.9 254 23-291 1-262 (333)
35 cd07848 STKc_CDKL5 Catalytic d 100.0 4.7E-45 1E-49 311.6 23.6 256 23-289 1-287 (287)
36 cd05585 STKc_YPK1_like Catalyt 100.0 3.7E-45 8.1E-50 316.0 23.2 248 31-292 1-253 (312)
37 cd05614 STKc_MSK2_N N-terminal 100.0 5.8E-45 1.3E-49 317.5 24.3 262 24-292 1-273 (332)
38 KOG0694 Serine/threonine prote 100.0 4.1E-45 8.9E-50 323.2 22.9 263 18-293 363-631 (694)
39 KOG0580 Serine/threonine prote 100.0 7.6E-46 1.7E-50 290.0 15.8 256 18-291 17-278 (281)
40 cd05595 STKc_PKB_beta Catalyti 100.0 7E-45 1.5E-49 315.7 23.3 251 29-291 1-256 (323)
41 cd05599 STKc_NDR_like Catalyti 100.0 3.8E-45 8.2E-50 322.5 21.8 257 23-292 1-302 (364)
42 cd05593 STKc_PKB_gamma Catalyt 100.0 6.7E-45 1.5E-49 316.4 23.0 252 29-292 1-257 (328)
43 cd05628 STKc_NDR1 Catalytic do 100.0 1.3E-44 2.8E-49 318.9 24.9 254 23-292 1-299 (363)
44 cd05587 STKc_cPKC Catalytic do 100.0 2.3E-44 4.9E-49 312.7 25.8 257 24-292 1-263 (324)
45 cd05590 STKc_nPKC_eta Catalyti 100.0 1.1E-44 2.5E-49 314.0 23.5 253 29-292 1-259 (320)
46 cd05596 STKc_ROCK Catalytic do 100.0 1.1E-44 2.4E-49 319.8 23.4 263 18-295 38-313 (370)
47 cd05589 STKc_PKN Catalytic dom 100.0 2.1E-44 4.5E-49 312.9 24.6 255 25-292 1-263 (324)
48 cd05629 STKc_NDR_like_fungal C 100.0 1.1E-44 2.3E-49 321.1 22.4 256 23-291 1-310 (377)
49 cd05607 STKc_GRK7 Catalytic do 100.0 5.1E-44 1.1E-48 303.9 25.7 253 31-291 1-259 (277)
50 cd05605 STKc_GRK4_like Catalyt 100.0 4.4E-44 9.6E-49 305.5 24.9 260 24-291 1-266 (285)
51 cd05588 STKc_aPKC Catalytic do 100.0 2.9E-44 6.2E-49 312.6 23.8 256 29-291 1-267 (329)
52 cd05608 STKc_GRK1 Catalytic do 100.0 4.7E-44 1E-48 304.5 24.7 253 31-291 1-262 (280)
53 cd05601 STKc_CRIK Catalytic do 100.0 5.4E-45 1.2E-49 317.4 19.2 254 23-292 1-269 (330)
54 cd05626 STKc_LATS2 Catalytic d 100.0 3.3E-44 7.2E-49 318.2 24.5 254 23-291 1-310 (381)
55 cd05618 STKc_aPKC_iota Catalyt 100.0 3E-44 6.5E-49 312.4 23.7 257 29-292 1-268 (329)
56 KOG0663 Protein kinase PITSLRE 100.0 1.1E-44 2.4E-49 296.0 19.5 270 11-291 64-366 (419)
57 cd05621 STKc_ROCK2 Catalytic d 100.0 1.9E-44 4E-49 318.1 22.6 264 18-296 38-314 (370)
58 cd05575 STKc_SGK Catalytic dom 100.0 2.6E-44 5.6E-49 312.2 23.0 250 29-291 1-256 (323)
59 PTZ00036 glycogen synthase kin 100.0 2.8E-44 6E-49 323.5 24.0 259 21-292 64-357 (440)
60 cd06650 PKc_MEK1 Catalytic dom 100.0 1.1E-43 2.5E-48 309.3 26.7 258 22-292 4-305 (333)
61 KOG0611 Predicted serine/threo 100.0 2.6E-45 5.6E-50 306.8 15.3 245 23-276 53-301 (668)
62 cd05598 STKc_LATS Catalytic do 100.0 2E-44 4.3E-49 319.2 21.6 256 23-291 1-306 (376)
63 cd05625 STKc_LATS1 Catalytic d 100.0 2.9E-44 6.2E-49 318.8 22.6 256 23-291 1-310 (382)
64 PHA03212 serine/threonine kina 100.0 1.1E-43 2.4E-48 314.9 26.1 260 20-296 89-386 (391)
65 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.1E-43 2.4E-48 306.4 25.2 265 21-296 4-296 (309)
66 cd05594 STKc_PKB_alpha Catalyt 100.0 2.1E-44 4.6E-49 313.0 20.6 251 29-291 1-257 (325)
67 cd05584 STKc_p70S6K Catalytic 100.0 6.5E-44 1.4E-48 309.6 23.5 252 28-291 1-261 (323)
68 cd07859 STKc_TDY_MAPK_plant Ca 100.0 7E-44 1.5E-48 311.3 23.8 258 24-293 1-297 (338)
69 cd05632 STKc_GRK5 Catalytic do 100.0 2.2E-43 4.8E-48 301.1 26.3 262 24-293 1-268 (285)
70 cd05616 STKc_cPKC_beta Catalyt 100.0 1.3E-43 2.8E-48 307.8 25.2 256 24-291 1-262 (323)
71 cd05582 STKc_RSK_N N-terminal 100.0 1.5E-44 3.3E-49 313.0 19.3 253 28-292 1-260 (318)
72 cd05591 STKc_nPKC_epsilon Cata 100.0 6.2E-44 1.3E-48 309.6 22.9 253 29-291 1-259 (321)
73 KOG0610 Putative serine/threon 100.0 4.2E-44 9.1E-49 300.1 20.8 263 18-291 72-397 (459)
74 cd05570 STKc_PKC Catalytic dom 100.0 7.1E-44 1.5E-48 308.8 23.0 252 29-292 1-258 (318)
75 cd05627 STKc_NDR2 Catalytic do 100.0 4.1E-44 8.9E-49 315.4 21.8 257 23-292 1-299 (360)
76 cd06625 STKc_MEKK3_like Cataly 100.0 4.1E-43 8.9E-48 295.7 26.7 252 23-289 2-263 (263)
77 cd05615 STKc_cPKC_alpha Cataly 100.0 1.6E-43 3.4E-48 307.2 24.9 257 24-292 1-263 (323)
78 cd07862 STKc_CDK6 Catalytic do 100.0 1.6E-43 3.6E-48 302.5 24.6 255 23-289 1-290 (290)
79 cd05620 STKc_nPKC_delta Cataly 100.0 9.3E-44 2E-48 307.7 23.1 248 29-292 1-254 (316)
80 KOG0658 Glycogen synthase kina 100.0 1.3E-44 2.9E-49 299.4 16.9 256 23-291 24-311 (364)
81 PLN00034 mitogen-activated pro 100.0 1.2E-43 2.6E-48 311.7 24.0 258 19-292 70-334 (353)
82 KOG0667 Dual-specificity tyros 100.0 2.4E-44 5.2E-49 317.7 18.8 261 18-290 181-506 (586)
83 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.7E-43 3.7E-48 307.5 24.0 258 29-293 1-267 (327)
84 KOG0589 Serine/threonine prote 100.0 1.4E-44 3.1E-49 311.5 16.6 253 22-282 3-262 (426)
85 cd07876 STKc_JNK2 Catalytic do 100.0 3.7E-43 7.9E-48 309.3 26.1 257 20-290 18-319 (359)
86 cd05592 STKc_nPKC_theta_delta 100.0 2.1E-43 4.5E-48 305.5 23.9 248 29-292 1-254 (316)
87 PF00069 Pkinase: Protein kina 100.0 4.5E-44 9.9E-49 300.9 19.0 253 25-289 1-260 (260)
88 cd05619 STKc_nPKC_theta Cataly 100.0 2.5E-43 5.3E-48 305.0 23.8 247 29-291 1-253 (316)
89 cd05604 STKc_SGK3 Catalytic do 100.0 1E-43 2.2E-48 308.7 21.5 250 29-291 1-256 (325)
90 cd07873 STKc_PCTAIRE1 Catalyti 100.0 3.2E-43 6.9E-48 302.4 24.1 266 21-297 4-297 (301)
91 KOG0594 Protein kinase PCTAIRE 100.0 1.4E-43 3E-48 293.4 20.7 260 22-292 10-308 (323)
92 cd07853 STKc_NLK Catalytic dom 100.0 1.2E-43 2.6E-48 313.8 21.7 258 24-292 1-294 (372)
93 cd05602 STKc_SGK1 Catalytic do 100.0 2.2E-43 4.7E-48 306.6 22.9 249 29-290 1-255 (325)
94 cd05622 STKc_ROCK1 Catalytic d 100.0 2E-43 4.4E-48 311.7 22.8 266 18-296 38-314 (371)
95 cd05102 PTKc_VEGFR3 Catalytic 100.0 2.9E-43 6.2E-48 307.5 23.4 254 19-279 3-331 (338)
96 cd05603 STKc_SGK2 Catalytic do 100.0 2.5E-43 5.5E-48 305.7 22.8 250 29-291 1-256 (321)
97 cd05630 STKc_GRK6 Catalytic do 100.0 8.4E-43 1.8E-47 297.5 25.6 260 24-291 1-266 (285)
98 KOG2345 Serine/threonine prote 100.0 7.7E-45 1.7E-49 285.8 11.5 260 15-278 13-296 (302)
99 KOG0599 Phosphorylase kinase g 100.0 7.5E-45 1.6E-49 289.9 11.4 255 23-291 17-288 (411)
100 cd07863 STKc_CDK4 Catalytic do 100.0 8.2E-43 1.8E-47 297.9 24.6 254 24-289 1-288 (288)
101 cd05586 STKc_Sck1_like Catalyt 100.0 1E-43 2.2E-48 309.4 19.1 251 31-292 1-259 (330)
102 KOG0660 Mitogen-activated prot 100.0 5.4E-44 1.2E-48 295.3 15.8 257 23-290 22-314 (359)
103 cd05580 STKc_PKA Catalytic dom 100.0 2.1E-42 4.6E-47 295.8 25.8 255 23-291 1-259 (290)
104 cd07874 STKc_JNK3 Catalytic do 100.0 6.7E-43 1.5E-47 307.2 23.3 256 21-290 15-315 (355)
105 cd05597 STKc_DMPK_like Catalyt 100.0 8.3E-43 1.8E-47 303.7 23.5 255 23-291 1-271 (331)
106 cd05572 STKc_cGK_PKG Catalytic 100.0 2E-42 4.4E-47 291.5 25.1 257 31-297 1-261 (262)
107 cd05578 STKc_Yank1 Catalytic d 100.0 7.4E-43 1.6E-47 293.5 22.1 254 24-289 1-258 (258)
108 KOG0201 Serine/threonine prote 100.0 6.2E-45 1.3E-49 307.1 9.3 256 22-294 12-271 (467)
109 cd07875 STKc_JNK1 Catalytic do 100.0 1.7E-42 3.7E-47 305.6 25.1 257 20-290 21-322 (364)
110 PTZ00284 protein kinase; Provi 100.0 7.9E-43 1.7E-47 317.0 23.4 258 21-291 127-443 (467)
111 PTZ00267 NIMA-related protein 100.0 3.7E-42 8.1E-47 313.0 27.4 252 22-281 66-326 (478)
112 cd06619 PKc_MKK5 Catalytic dom 100.0 4.2E-42 9.1E-47 292.4 25.8 255 23-293 1-260 (279)
113 cd05574 STKc_phototropin_like 100.0 3.5E-42 7.5E-47 298.0 25.6 259 23-292 1-295 (316)
114 cd07847 STKc_CDKL1_4 Catalytic 100.0 4.2E-42 9.2E-47 293.1 25.7 257 23-289 1-286 (286)
115 cd06609 STKc_MST3_like Catalyt 100.0 2.5E-42 5.5E-47 292.8 24.1 256 23-294 1-259 (274)
116 PHA02988 hypothetical protein; 100.0 1.8E-42 4E-47 295.1 23.3 245 23-278 18-275 (283)
117 cd08529 STKc_FA2-like Catalyti 100.0 5.9E-42 1.3E-46 287.5 25.5 250 24-289 1-256 (256)
118 cd06628 STKc_MAPKKK_Byr2_like 100.0 3.9E-42 8.4E-47 290.5 24.4 250 24-289 1-267 (267)
119 PHA03209 serine/threonine kina 100.0 2.5E-42 5.4E-47 303.6 24.0 255 20-291 63-356 (357)
120 PTZ00283 serine/threonine prot 100.0 6.9E-42 1.5E-46 311.6 27.4 253 20-280 29-299 (496)
121 cd06615 PKc_MEK Catalytic doma 100.0 9.5E-42 2.1E-46 294.2 26.8 255 23-291 1-292 (308)
122 PTZ00266 NIMA-related protein 100.0 6E-42 1.3E-46 323.3 27.7 262 16-291 6-300 (1021)
123 cd07861 STKc_CDK1_euk Catalyti 100.0 6.1E-42 1.3E-46 292.0 25.0 255 24-289 1-285 (285)
124 cd06612 STKc_MST1_2 Catalytic 100.0 4.1E-42 8.9E-47 288.4 22.8 253 22-289 2-256 (256)
125 cd07839 STKc_CDK5 Catalytic do 100.0 3.2E-42 6.9E-47 293.7 22.3 255 24-289 1-284 (284)
126 cd05609 STKc_MAST Catalytic do 100.0 1.4E-41 3E-46 292.8 26.5 257 23-291 1-278 (305)
127 cd05577 STKc_GRK Catalytic dom 100.0 6.9E-42 1.5E-46 290.7 24.2 254 31-292 1-260 (277)
128 KOG0193 Serine/threonine prote 100.0 7.3E-44 1.6E-48 311.0 12.2 259 17-282 386-653 (678)
129 cd06623 PKc_MAPKK_plant_like C 100.0 1.6E-41 3.4E-46 286.1 26.0 257 23-292 1-262 (264)
130 cd06605 PKc_MAPKK Catalytic do 100.0 2.3E-42 4.9E-47 291.5 20.8 255 23-289 1-260 (265)
131 cd06645 STKc_MAP4K3 Catalytic 100.0 3.4E-42 7.4E-47 290.9 21.8 259 18-288 4-267 (267)
132 cd06626 STKc_MEKK4 Catalytic d 100.0 1.6E-41 3.5E-46 286.1 25.8 253 24-289 1-264 (264)
133 cd06632 STKc_MEKK1_plant Catal 100.0 9.8E-42 2.1E-46 286.3 24.3 252 24-289 1-258 (258)
134 cd05064 PTKc_EphR_A10 Catalyti 100.0 8.2E-42 1.8E-46 288.6 23.7 250 20-277 2-260 (266)
135 cd06644 STKc_STK10_LOK Catalyt 100.0 1.8E-41 4E-46 290.3 26.1 259 18-291 7-274 (292)
136 cd07841 STKc_CDK7 Catalytic do 100.0 7.4E-42 1.6E-46 293.4 23.5 262 24-296 1-292 (298)
137 cd08220 STKc_Nek8 Catalytic do 100.0 2.5E-41 5.3E-46 283.7 26.0 251 24-289 1-256 (256)
138 cd05623 STKc_MRCK_alpha Cataly 100.0 9.7E-42 2.1E-46 297.1 24.4 256 23-292 1-272 (332)
139 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.2E-41 2.6E-46 287.3 24.1 254 23-289 1-267 (267)
140 cd06655 STKc_PAK2 Catalytic do 100.0 3.8E-41 8.3E-46 288.8 27.6 255 22-291 18-274 (296)
141 cd05106 PTKc_CSF-1R Catalytic 100.0 5.3E-42 1.2E-46 303.0 22.8 253 20-279 35-369 (374)
142 cd06637 STKc_TNIK Catalytic do 100.0 9.2E-42 2E-46 289.0 23.3 253 22-289 5-272 (272)
143 cd07832 STKc_CCRK Catalytic do 100.0 1.2E-41 2.6E-46 290.3 24.2 256 24-290 1-286 (286)
144 KOG0604 MAP kinase-activated p 100.0 2.5E-43 5.4E-48 284.3 12.8 260 19-291 57-327 (400)
145 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.1E-41 2.5E-46 288.5 23.7 256 24-289 2-272 (272)
146 cd05104 PTKc_Kit Catalytic dom 100.0 7E-42 1.5E-46 302.5 23.3 253 20-279 32-371 (375)
147 cd06646 STKc_MAP4K5 Catalytic 100.0 7E-42 1.5E-46 289.0 22.2 252 22-277 8-264 (267)
148 cd06613 STKc_MAP4K3_like Catal 100.0 1.9E-41 4.1E-46 285.4 24.7 248 23-277 3-259 (262)
149 cd06651 STKc_MEKK3 Catalytic d 100.0 2.3E-41 5E-46 285.8 25.3 252 23-290 2-265 (266)
150 KOG1026 Nerve growth factor re 100.0 4E-43 8.6E-48 317.9 15.4 249 21-277 484-757 (774)
151 cd05624 STKc_MRCK_beta Catalyt 100.0 8E-42 1.7E-46 297.5 23.1 256 23-291 1-271 (331)
152 cd06654 STKc_PAK1 Catalytic do 100.0 4.1E-41 8.8E-46 288.7 27.0 257 20-291 17-275 (296)
153 cd06630 STKc_MEKK1 Catalytic d 100.0 1.4E-41 3E-46 287.2 23.7 255 24-289 1-267 (268)
154 cd08227 PK_STRAD_alpha Pseudok 100.0 9.9E-42 2.1E-46 296.5 23.3 257 26-293 1-314 (327)
155 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.6E-41 3.6E-46 285.1 23.6 249 21-278 2-254 (256)
156 cd05052 PTKc_Abl Catalytic dom 100.0 2.6E-41 5.7E-46 285.0 24.9 251 20-278 3-258 (263)
157 cd05096 PTKc_DDR1 Catalytic do 100.0 1.7E-41 3.7E-46 292.1 24.1 253 22-277 4-300 (304)
158 cd06611 STKc_SLK_like Catalyti 100.0 1.3E-41 2.8E-46 289.4 23.0 256 23-293 5-269 (280)
159 cd08223 STKc_Nek4 Catalytic do 100.0 5.3E-41 1.1E-45 281.9 26.4 250 24-289 1-257 (257)
160 PHA03207 serine/threonine kina 100.0 3E-41 6.5E-46 300.2 26.3 255 21-291 90-380 (392)
161 cd06608 STKc_myosinIII_like Ca 100.0 2.3E-41 5E-46 286.6 24.3 255 21-289 4-275 (275)
162 cd06606 STKc_MAPKKK Catalytic 100.0 4.7E-41 1E-45 281.9 25.8 252 24-289 1-260 (260)
163 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.5E-41 3.3E-46 289.8 23.2 256 23-291 1-267 (286)
164 cd06639 STKc_myosinIIIB Cataly 100.0 4.8E-41 1E-45 287.5 26.2 255 22-290 21-291 (291)
165 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.8E-41 3.8E-46 288.9 23.4 254 21-289 14-282 (282)
166 cd06631 STKc_YSK4 Catalytic do 100.0 3.5E-41 7.6E-46 284.4 25.0 250 24-289 1-265 (265)
167 cd06643 STKc_SLK Catalytic dom 100.0 2.6E-41 5.6E-46 287.9 24.3 253 24-290 6-266 (282)
168 KOG0607 MAP kinase-interacting 100.0 1.2E-42 2.6E-47 282.7 15.1 256 28-291 83-366 (463)
169 cd05048 PTKc_Ror Catalytic Dom 100.0 1.4E-41 3E-46 289.6 22.3 250 21-278 3-279 (283)
170 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.9E-41 4E-46 289.1 22.7 258 21-290 3-270 (284)
171 cd08221 STKc_Nek9 Catalytic do 100.0 9.6E-41 2.1E-45 280.3 26.7 246 24-277 1-252 (256)
172 KOG0986 G protein-coupled rece 100.0 8.1E-43 1.7E-47 295.1 13.8 266 19-292 181-452 (591)
173 cd08228 STKc_Nek6 Catalytic do 100.0 3.6E-41 7.9E-46 284.6 23.9 251 23-278 2-261 (267)
174 KOG1989 ARK protein kinase fam 100.0 4.2E-42 9E-47 312.4 19.1 263 20-292 34-321 (738)
175 cd05072 PTKc_Lyn Catalytic dom 100.0 5.2E-41 1.1E-45 282.8 24.5 250 19-277 2-256 (261)
176 PHA03211 serine/threonine kina 100.0 4E-41 8.7E-46 302.6 25.1 255 20-291 166-460 (461)
177 cd05068 PTKc_Frk_like Catalyti 100.0 9.7E-41 2.1E-45 281.2 26.0 249 20-277 3-256 (261)
178 KOG4717 Serine/threonine prote 100.0 4.3E-42 9.3E-47 295.0 17.6 258 21-294 16-278 (864)
179 cd08219 STKc_Nek3 Catalytic do 100.0 4.9E-41 1.1E-45 282.0 23.8 248 24-279 1-253 (255)
180 cd05088 PTKc_Tie2 Catalytic do 100.0 3.2E-41 6.9E-46 290.3 23.1 252 20-279 4-277 (303)
181 cd06652 STKc_MEKK2 Catalytic d 100.0 1.4E-40 3E-45 280.8 26.5 251 23-289 2-264 (265)
182 cd07878 STKc_p38beta_MAPK11 Ca 100.0 6.8E-42 1.5E-46 299.5 19.0 256 22-291 14-303 (343)
183 cd06656 STKc_PAK3 Catalytic do 100.0 4.7E-41 1E-45 288.4 23.9 257 20-291 16-274 (297)
184 cd05113 PTKc_Btk_Bmx Catalytic 100.0 6.7E-41 1.4E-45 281.5 24.2 248 21-277 2-253 (256)
185 cd07846 STKc_CDKL2_3 Catalytic 100.0 2.8E-41 6E-46 288.1 21.8 257 23-289 1-286 (286)
186 cd06638 STKc_myosinIIIA Cataly 100.0 7.3E-41 1.6E-45 285.6 24.3 255 21-289 16-286 (286)
187 cd08218 STKc_Nek1 Catalytic do 100.0 9.7E-41 2.1E-45 280.2 24.6 250 24-289 1-256 (256)
188 cd07831 STKc_MOK Catalytic dom 100.0 5E-41 1.1E-45 285.9 23.1 253 25-289 1-282 (282)
189 cd07833 STKc_CDKL Catalytic do 100.0 7.5E-41 1.6E-45 285.6 23.9 257 23-289 1-288 (288)
190 cd07860 STKc_CDK2_3 Catalytic 100.0 6.3E-41 1.4E-45 285.7 23.3 255 24-289 1-284 (284)
191 PLN00009 cyclin-dependent kina 100.0 1.9E-40 4.1E-45 284.2 26.3 262 23-294 2-292 (294)
192 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.8E-40 4E-45 283.9 26.2 257 22-289 4-291 (291)
193 cd05122 PKc_STE Catalytic doma 100.0 2.1E-40 4.5E-45 276.9 25.8 251 24-288 1-253 (253)
194 cd05059 PTKc_Tec_like Catalyti 100.0 7.9E-41 1.7E-45 281.0 23.3 249 21-278 2-254 (256)
195 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.5E-40 3.3E-45 283.1 25.3 256 23-293 1-268 (283)
196 cd07844 STKc_PCTAIRE_like Cata 100.0 1.4E-40 3.1E-45 284.5 25.2 257 22-289 4-291 (291)
197 PF07714 Pkinase_Tyr: Protein 100.0 9.2E-42 2E-46 287.2 17.4 244 26-277 2-257 (259)
198 cd07843 STKc_CDC2L1 Catalytic 100.0 6.8E-41 1.5E-45 286.8 23.1 258 21-289 3-293 (293)
199 cd06917 STKc_NAK1_like Catalyt 100.0 9.4E-41 2E-45 283.6 23.7 255 24-293 2-262 (277)
200 cd08229 STKc_Nek7 Catalytic do 100.0 4.6E-41 9.9E-46 284.0 21.4 251 23-278 2-261 (267)
201 cd05049 PTKc_Trk Catalytic dom 100.0 5E-41 1.1E-45 285.7 21.8 250 21-278 3-277 (280)
202 cd05611 STKc_Rim15_like Cataly 100.0 9.4E-41 2E-45 281.0 23.2 249 29-292 2-257 (260)
203 cd08217 STKc_Nek2 Catalytic do 100.0 1.9E-40 4.2E-45 279.3 25.1 250 24-289 1-265 (265)
204 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 2.3E-40 5E-45 282.8 25.9 259 23-293 1-273 (287)
205 cd07845 STKc_CDK10 Catalytic d 100.0 1.3E-40 2.7E-45 287.3 23.9 263 19-292 3-296 (309)
206 cd05039 PTKc_Csk_like Catalyti 100.0 2.4E-40 5.2E-45 277.9 25.0 247 20-278 3-252 (256)
207 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.5E-40 3.3E-45 282.5 23.9 253 20-278 3-274 (277)
208 cd05062 PTKc_IGF-1R Catalytic 100.0 1.5E-40 3.3E-45 282.4 23.8 252 19-278 2-274 (277)
209 cd06614 STKc_PAK Catalytic dom 100.0 1.9E-40 4.2E-45 283.1 24.5 257 21-291 17-275 (286)
210 PRK13184 pknD serine/threonine 100.0 1.3E-40 2.8E-45 313.0 25.4 253 23-281 2-288 (932)
211 cd05579 STKc_MAST_like Catalyt 100.0 8.6E-41 1.9E-45 281.5 22.0 250 31-292 1-263 (265)
212 cd07868 STKc_CDK8 Catalytic do 100.0 1.1E-40 2.3E-45 288.8 23.1 252 28-289 6-317 (317)
213 KOG0574 STE20-like serine/thre 100.0 2.1E-44 4.7E-49 291.0 -0.1 254 24-292 34-289 (502)
214 cd07837 STKc_CdkB_plant Cataly 100.0 2.4E-40 5.2E-45 283.6 24.9 257 23-290 1-295 (295)
215 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 3.5E-40 7.6E-45 278.4 25.5 252 23-279 2-262 (267)
216 KOG0194 Protein tyrosine kinas 100.0 1.3E-41 2.8E-46 298.4 17.0 261 11-278 145-416 (474)
217 cd05581 STKc_PDK1 Catalytic do 100.0 1E-40 2.2E-45 283.5 22.1 254 23-289 1-280 (280)
218 cd05089 PTKc_Tie1 Catalytic do 100.0 1.9E-40 4.2E-45 284.6 23.9 249 23-279 2-272 (297)
219 cd06653 STKc_MEKK3_like_1 Cata 100.0 6.1E-40 1.3E-44 276.8 26.5 251 23-289 2-264 (264)
220 cd06640 STKc_MST4 Catalytic do 100.0 2.2E-40 4.8E-45 281.5 23.9 253 23-292 4-259 (277)
221 cd05061 PTKc_InsR Catalytic do 100.0 2.6E-40 5.6E-45 282.6 24.4 264 19-292 2-286 (288)
222 cd05054 PTKc_VEGFR Catalytic d 100.0 1.1E-40 2.3E-45 291.0 22.3 256 19-281 3-332 (337)
223 cd05090 PTKc_Ror1 Catalytic do 100.0 3.2E-40 7E-45 281.3 24.8 250 21-278 3-279 (283)
224 cd06647 STKc_PAK_I Catalytic d 100.0 1.9E-40 4.2E-45 284.1 23.4 256 22-292 18-275 (293)
225 PHA03390 pk1 serine/threonine- 100.0 4.4E-40 9.6E-45 278.2 25.3 248 23-290 14-266 (267)
226 cd05033 PTKc_EphR Catalytic do 100.0 3.9E-40 8.5E-45 278.2 25.0 251 21-279 2-262 (266)
227 cd05071 PTKc_Src Catalytic dom 100.0 3.3E-40 7.1E-45 278.2 24.3 248 20-277 3-255 (262)
228 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 2.9E-40 6.2E-45 281.6 24.0 251 23-277 3-276 (283)
229 cd05108 PTKc_EGFR Catalytic do 100.0 2.4E-40 5.1E-45 286.5 23.8 250 21-279 5-265 (316)
230 cd05084 PTKc_Fes Catalytic dom 100.0 2.1E-40 4.5E-45 277.7 22.7 242 29-278 1-249 (252)
231 cd05105 PTKc_PDGFR_alpha Catal 100.0 2.8E-40 6E-45 293.6 24.8 255 18-279 32-394 (400)
232 cd07835 STKc_CDK1_like Catalyt 100.0 2.1E-40 4.4E-45 282.4 22.7 254 25-289 1-283 (283)
233 cd07865 STKc_CDK9 Catalytic do 100.0 4.2E-40 9.1E-45 283.9 24.8 263 15-289 4-310 (310)
234 cd07836 STKc_Pho85 Catalytic d 100.0 4.4E-40 9.5E-45 280.4 24.4 255 24-289 1-284 (284)
235 cd05148 PTKc_Srm_Brk Catalytic 100.0 9.1E-41 2E-45 281.2 19.9 247 22-277 5-256 (261)
236 cd05055 PTKc_PDGFR Catalytic d 100.0 3.6E-40 7.9E-45 283.6 24.0 256 16-278 28-297 (302)
237 KOG1095 Protein tyrosine kinas 100.0 7.5E-41 1.6E-45 313.1 21.1 253 19-279 688-958 (1025)
238 cd07850 STKc_JNK Catalytic dom 100.0 2.7E-40 5.8E-45 290.4 23.3 256 21-290 14-315 (353)
239 KOG4721 Serine/threonine prote 100.0 7.2E-42 1.6E-46 296.5 13.0 240 24-278 125-364 (904)
240 cd05093 PTKc_TrkB Catalytic do 100.0 3.9E-40 8.4E-45 281.5 23.6 249 21-277 3-274 (288)
241 cd06627 STKc_Cdc7_like Catalyt 100.0 1.2E-39 2.6E-44 272.9 26.1 250 24-289 1-254 (254)
242 cd06624 STKc_ASK Catalytic dom 100.0 1E-39 2.2E-44 276.0 25.8 256 22-289 7-268 (268)
243 cd05032 PTKc_InsR_like Catalyt 100.0 4.8E-40 1E-44 279.2 23.7 250 20-277 3-273 (277)
244 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.3E-40 2.8E-45 282.9 20.1 249 23-280 4-255 (277)
245 cd05034 PTKc_Src_like Catalyti 100.0 8E-40 1.7E-44 275.4 24.7 248 20-276 3-255 (261)
246 cd05067 PTKc_Lck_Blk Catalytic 100.0 7.4E-40 1.6E-44 275.7 24.4 247 21-277 4-255 (260)
247 cd00192 PTKc Catalytic domain 100.0 4.2E-40 9.2E-45 276.7 22.9 242 29-278 1-260 (262)
248 cd05051 PTKc_DDR Catalytic dom 100.0 4.7E-40 1E-44 281.9 23.5 254 21-277 3-292 (296)
249 cd08215 STKc_Nek Catalytic dom 100.0 1.1E-39 2.3E-44 273.7 25.2 250 24-289 1-258 (258)
250 cd05109 PTKc_HER2 Catalytic do 100.0 7.4E-40 1.6E-44 278.5 24.5 249 20-277 4-263 (279)
251 KOG1187 Serine/threonine prote 100.0 9.9E-41 2.1E-45 290.3 19.5 254 22-279 74-349 (361)
252 cd06607 STKc_TAO Catalytic dom 100.0 1.1E-39 2.3E-44 281.4 25.7 251 21-290 13-271 (307)
253 cd07866 STKc_BUR1 Catalytic do 100.0 3.5E-40 7.6E-45 284.5 22.8 262 17-289 2-311 (311)
254 cd05053 PTKc_FGFR Catalytic do 100.0 5.8E-40 1.3E-44 281.0 23.9 253 19-279 8-288 (293)
255 cd07858 STKc_TEY_MAPK_plant Ca 100.0 3.5E-40 7.6E-45 287.9 22.9 258 22-291 4-296 (337)
256 cd08225 STKc_Nek5 Catalytic do 100.0 5.9E-40 1.3E-44 275.5 23.4 251 24-289 1-257 (257)
257 cd05633 STKc_GRK3 Catalytic do 100.0 7.4E-40 1.6E-44 278.6 24.2 253 30-291 1-260 (279)
258 cd05098 PTKc_FGFR1 Catalytic d 100.0 9.1E-40 2E-44 281.7 25.0 253 21-281 16-298 (307)
259 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 6.9E-40 1.5E-44 275.8 23.7 248 20-277 3-255 (260)
260 cd05094 PTKc_TrkC Catalytic do 100.0 8.2E-40 1.8E-44 279.9 24.4 258 22-287 4-287 (291)
261 cd05065 PTKc_EphR_B Catalytic 100.0 5.7E-40 1.2E-44 277.7 23.2 250 21-278 2-264 (269)
262 cd05116 PTKc_Syk Catalytic dom 100.0 9E-40 1.9E-44 274.7 24.1 239 30-277 2-250 (257)
263 KOG0579 Ste20-like serine/thre 100.0 2.9E-42 6.3E-47 302.3 9.2 258 23-294 32-297 (1187)
264 cd05091 PTKc_Ror2 Catalytic do 100.0 2.7E-40 5.8E-45 281.7 21.0 249 21-277 3-278 (283)
265 cd07840 STKc_CDK9_like Catalyt 100.0 1E-39 2.2E-44 278.4 24.3 254 25-289 1-287 (287)
266 cd06648 STKc_PAK_II Catalytic 100.0 1.1E-39 2.4E-44 278.4 24.5 252 24-291 20-274 (285)
267 cd05613 STKc_MSK1_N N-terminal 100.0 1.6E-39 3.4E-44 278.0 25.5 262 24-292 1-274 (290)
268 cd05583 STKc_MSK_N N-terminal 100.0 7.8E-40 1.7E-44 279.6 23.6 261 24-293 1-273 (288)
269 cd05082 PTKc_Csk Catalytic dom 100.0 1.2E-39 2.6E-44 273.8 24.3 246 19-277 2-251 (256)
270 cd06616 PKc_MKK4 Catalytic dom 100.0 2.5E-40 5.4E-45 282.6 20.4 255 22-291 3-272 (288)
271 cd07864 STKc_CDK12 Catalytic d 100.0 5.4E-40 1.2E-44 282.4 22.6 257 21-289 5-302 (302)
272 cd05046 PTK_CCK4 Pseudokinase 100.0 7.6E-40 1.6E-44 277.7 23.1 250 22-278 4-272 (275)
273 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.2E-39 2.5E-44 277.9 24.4 255 21-278 2-279 (284)
274 cd05060 PTKc_Syk_like Catalyti 100.0 1.4E-39 3.1E-44 273.5 24.4 240 29-277 1-250 (257)
275 PTZ00024 cyclin-dependent prot 100.0 5.5E-40 1.2E-44 286.5 22.4 262 22-294 7-321 (335)
276 cd07834 STKc_MAPK Catalytic do 100.0 2.3E-40 4.9E-45 288.3 20.0 257 24-291 1-294 (330)
277 cd07855 STKc_ERK5 Catalytic do 100.0 4E-40 8.6E-45 287.3 21.4 258 23-291 5-299 (334)
278 cd05066 PTKc_EphR_A Catalytic 100.0 8.5E-40 1.9E-44 276.4 22.8 250 21-278 2-262 (267)
279 cd07849 STKc_ERK1_2_like Catal 100.0 4.1E-40 8.9E-45 287.4 21.4 257 22-290 4-296 (336)
280 cd05045 PTKc_RET Catalytic dom 100.0 1.4E-39 3.1E-44 278.3 24.2 247 24-278 1-282 (290)
281 KOG4236 Serine/threonine prote 100.0 2.4E-41 5.2E-46 291.1 13.1 250 28-292 569-825 (888)
282 cd05112 PTKc_Itk Catalytic dom 100.0 2.3E-39 5E-44 271.9 24.9 249 21-278 2-254 (256)
283 cd06658 STKc_PAK5 Catalytic do 100.0 2.1E-40 4.5E-45 283.8 18.6 254 23-291 22-277 (292)
284 cd06641 STKc_MST3 Catalytic do 100.0 2.7E-39 5.9E-44 274.7 25.3 247 24-279 5-254 (277)
285 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.7E-39 3.8E-44 279.6 24.4 255 17-279 9-293 (304)
286 cd05097 PTKc_DDR_like Catalyti 100.0 9E-40 2E-44 280.2 22.4 253 22-277 4-291 (295)
287 cd05069 PTKc_Yes Catalytic dom 100.0 2.6E-39 5.5E-44 272.4 24.7 246 22-277 5-255 (260)
288 cd08530 STKc_CNK2-like Catalyt 100.0 1.7E-39 3.7E-44 272.4 23.5 249 24-289 1-256 (256)
289 cd05123 STKc_AGC Catalytic dom 100.0 1.6E-39 3.4E-44 271.8 23.1 245 31-289 1-250 (250)
290 cd05063 PTKc_EphR_A2 Catalytic 100.0 2.3E-39 5.1E-44 273.7 24.4 249 21-277 3-262 (268)
291 cd05606 STKc_beta_ARK Catalyti 100.0 3.4E-39 7.3E-44 274.4 25.4 255 30-293 1-262 (278)
292 cd07867 STKc_CDC2L6 Catalytic 100.0 2E-39 4.3E-44 280.8 24.3 252 28-289 6-317 (317)
293 cd05118 STKc_CMGC Catalytic do 100.0 5.2E-40 1.1E-44 279.6 20.3 254 25-289 1-283 (283)
294 KOG0612 Rho-associated, coiled 100.0 1.9E-41 4.2E-46 313.1 12.2 262 20-293 72-345 (1317)
295 cd05099 PTKc_FGFR4 Catalytic d 100.0 3.2E-39 6.8E-44 279.3 25.3 253 19-279 8-290 (314)
296 cd05092 PTKc_TrkA Catalytic do 100.0 1.6E-39 3.4E-44 276.7 22.9 248 22-277 4-276 (280)
297 cd07838 STKc_CDK4_6_like Catal 100.0 3E-39 6.5E-44 275.5 24.7 253 25-289 1-287 (287)
298 PHA03210 serine/threonine kina 100.0 6.8E-40 1.5E-44 299.3 21.9 258 22-291 147-459 (501)
299 cd05073 PTKc_Hck Catalytic dom 100.0 4.5E-39 9.7E-44 270.9 25.2 248 20-277 3-255 (260)
300 cd05043 PTK_Ryk Pseudokinase d 100.0 3.1E-39 6.7E-44 274.8 24.3 253 19-279 2-273 (280)
301 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.4E-39 2.9E-44 277.2 22.0 255 22-279 3-280 (284)
302 cd07842 STKc_CDK8_like Catalyt 100.0 1.8E-39 3.9E-44 280.8 23.0 255 24-289 1-316 (316)
303 cd06659 STKc_PAK6 Catalytic do 100.0 1.1E-39 2.4E-44 280.0 21.5 253 23-291 21-276 (297)
304 cd05107 PTKc_PDGFR_beta Cataly 100.0 2E-39 4.3E-44 288.0 23.7 255 17-278 31-395 (401)
305 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 2E-39 4.3E-44 276.6 22.8 253 22-278 3-279 (284)
306 cd05047 PTKc_Tie Catalytic dom 100.0 2.6E-39 5.5E-44 273.9 23.2 243 29-279 1-265 (270)
307 cd05111 PTK_HER3 Pseudokinase 100.0 5.5E-39 1.2E-43 273.2 25.2 250 20-278 4-264 (279)
308 cd05075 PTKc_Axl Catalytic dom 100.0 2.4E-39 5.2E-44 274.2 22.8 246 25-278 1-267 (272)
309 cd05040 PTKc_Ack_like Catalyti 100.0 2.7E-39 5.8E-44 271.7 22.8 241 29-277 1-253 (257)
310 KOG0596 Dual specificity; seri 100.0 2.8E-40 6E-45 285.8 17.0 255 21-291 359-632 (677)
311 cd06618 PKc_MKK7 Catalytic dom 100.0 5.1E-39 1.1E-43 275.7 24.7 258 19-291 11-278 (296)
312 cd08226 PK_STRAD_beta Pseudoki 100.0 1.7E-39 3.7E-44 282.6 21.9 256 29-294 4-316 (328)
313 cd05095 PTKc_DDR2 Catalytic do 100.0 3.3E-39 7.2E-44 276.8 23.4 253 22-277 4-292 (296)
314 cd05035 PTKc_Axl_like Catalyti 100.0 3.8E-39 8.1E-44 273.0 23.1 246 25-278 1-268 (273)
315 KOG0983 Mitogen-activated prot 100.0 1.6E-40 3.6E-45 265.0 13.6 256 20-290 89-353 (391)
316 smart00219 TyrKc Tyrosine kina 100.0 5.2E-39 1.1E-43 269.7 23.3 245 25-277 1-256 (258)
317 cd07829 STKc_CDK_like Catalyti 100.0 2.1E-39 4.6E-44 275.7 21.2 254 25-289 1-282 (282)
318 cd07852 STKc_MAPK15 Catalytic 100.0 2.4E-39 5.3E-44 282.7 22.0 260 21-292 5-301 (337)
319 cd05100 PTKc_FGFR3 Catalytic d 100.0 7E-39 1.5E-43 279.4 24.8 257 19-283 8-294 (334)
320 cd07880 STKc_p38gamma_MAPK12 C 100.0 2.6E-39 5.6E-44 283.1 22.1 258 21-292 13-304 (343)
321 cd07830 STKc_MAK_like Catalyti 100.0 3.2E-39 6.9E-44 275.0 22.1 254 25-289 1-283 (283)
322 cd05083 PTKc_Chk Catalytic dom 100.0 5.8E-39 1.3E-43 269.3 22.8 245 19-277 2-249 (254)
323 cd05115 PTKc_Zap-70 Catalytic 100.0 1E-38 2.2E-43 268.3 24.2 239 30-277 2-250 (257)
324 cd06633 STKc_TAO3 Catalytic do 100.0 1.6E-38 3.4E-43 274.7 25.7 250 24-292 22-279 (313)
325 cd05056 PTKc_FAK Catalytic dom 100.0 1.1E-38 2.4E-43 270.0 24.0 251 20-279 3-262 (270)
326 cd06635 STKc_TAO1 Catalytic do 100.0 1.9E-38 4.1E-43 274.7 26.0 243 23-276 25-275 (317)
327 cd05057 PTKc_EGFR_like Catalyt 100.0 1.6E-38 3.5E-43 270.2 25.1 249 21-278 5-264 (279)
328 cd05103 PTKc_VEGFR2 Catalytic 100.0 5.9E-39 1.3E-43 280.8 22.9 254 19-279 3-336 (343)
329 cd06657 STKc_PAK4 Catalytic do 100.0 7.4E-39 1.6E-43 274.1 23.0 253 24-291 21-275 (292)
330 cd08528 STKc_Nek10 Catalytic d 100.0 7.8E-39 1.7E-43 270.7 22.8 248 24-278 1-266 (269)
331 cd05050 PTKc_Musk Catalytic do 100.0 8.1E-39 1.8E-43 273.3 23.0 249 21-277 3-284 (288)
332 cd05041 PTKc_Fes_like Catalyti 100.0 1.5E-38 3.2E-43 266.2 23.9 241 29-278 1-248 (251)
333 KOG0586 Serine/threonine prote 100.0 9.2E-40 2E-44 286.3 16.8 250 20-277 53-305 (596)
334 KOG0584 Serine/threonine prote 100.0 3.9E-40 8.5E-45 289.1 14.2 256 21-292 37-302 (632)
335 cd07857 STKc_MPK1 Catalytic do 100.0 2E-38 4.3E-43 276.3 24.7 256 24-290 1-296 (332)
336 KOG0690 Serine/threonine prote 100.0 3.1E-40 6.6E-45 269.4 12.3 261 20-292 165-430 (516)
337 cd05085 PTKc_Fer Catalytic dom 100.0 2.6E-38 5.6E-43 264.6 24.4 240 29-277 1-246 (250)
338 cd07879 STKc_p38delta_MAPK13 C 100.0 8.2E-39 1.8E-43 279.8 22.0 255 23-292 15-303 (342)
339 cd07851 STKc_p38 Catalytic dom 100.0 3E-39 6.5E-44 282.7 19.0 256 22-291 14-303 (343)
340 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 2.6E-38 5.7E-43 275.0 24.7 255 21-289 8-291 (328)
341 cd07854 STKc_MAPK4_6 Catalytic 100.0 9.5E-39 2.1E-43 279.4 21.9 256 22-280 4-302 (342)
342 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 2.4E-38 5.2E-43 267.8 23.5 243 29-277 1-265 (269)
343 cd08216 PK_STRAD Pseudokinase 100.0 1.1E-38 2.4E-43 275.8 21.4 254 26-292 5-301 (314)
344 cd08222 STKc_Nek11 Catalytic d 100.0 1.2E-38 2.6E-43 268.2 21.0 249 24-289 1-260 (260)
345 cd05110 PTKc_HER4 Catalytic do 100.0 2.9E-38 6.3E-43 271.9 23.5 252 20-280 4-266 (303)
346 KOG4279 Serine/threonine prote 100.0 4.9E-40 1.1E-44 290.8 12.5 252 29-292 581-838 (1226)
347 cd05044 PTKc_c-ros Catalytic d 100.0 1.6E-38 3.5E-43 268.7 21.3 244 29-278 1-266 (269)
348 cd07877 STKc_p38alpha_MAPK14 C 100.0 2.4E-38 5.3E-43 277.1 22.8 255 22-290 16-304 (345)
349 cd05042 PTKc_Aatyk Catalytic d 100.0 2.5E-38 5.5E-43 267.6 22.0 244 29-278 1-266 (269)
350 cd06634 STKc_TAO2 Catalytic do 100.0 3.2E-38 7E-43 272.2 22.9 249 23-290 15-271 (308)
351 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2.8E-38 6.1E-43 265.6 21.7 239 29-278 1-257 (259)
352 cd05576 STKc_RPK118_like Catal 100.0 2.6E-38 5.7E-43 262.7 20.4 234 34-289 4-237 (237)
353 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 6.2E-38 1.3E-42 264.4 22.8 240 29-278 1-260 (262)
354 PHA02882 putative serine/threo 100.0 1.3E-37 2.8E-42 266.8 24.2 251 20-277 9-291 (294)
355 cd05058 PTKc_Met_Ron Catalytic 100.0 1.1E-37 2.4E-42 262.5 23.5 243 29-279 1-256 (262)
356 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.8E-38 3.8E-43 267.0 18.4 240 29-278 1-256 (258)
357 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 6.9E-38 1.5E-42 265.8 21.7 239 30-278 2-272 (274)
358 KOG0577 Serine/threonine prote 100.0 2.2E-39 4.8E-44 282.2 11.6 247 24-290 27-282 (948)
359 cd05086 PTKc_Aatyk2 Catalytic 100.0 3.2E-37 6.9E-42 260.9 24.1 247 29-278 1-265 (268)
360 cd05074 PTKc_Tyro3 Catalytic d 100.0 2.4E-37 5.2E-42 262.1 22.1 245 25-277 1-267 (273)
361 cd05610 STKc_MASTL Catalytic d 100.0 4.4E-37 9.6E-42 289.1 25.2 147 21-169 2-152 (669)
362 KOG0603 Ribosomal protein S6 k 100.0 2E-38 4.3E-43 279.3 14.8 252 22-291 321-574 (612)
363 KOG0671 LAMMER dual specificit 100.0 5.6E-39 1.2E-43 266.8 10.7 263 19-294 85-414 (415)
364 KOG0666 Cyclin C-dependent kin 100.0 4.9E-39 1.1E-43 260.8 9.1 281 3-292 4-343 (438)
365 KOG4250 TANK binding protein k 100.0 3.7E-38 8E-43 280.0 15.3 250 21-270 11-296 (732)
366 KOG0696 Serine/threonine prote 100.0 1.2E-37 2.6E-42 261.4 15.9 262 19-292 345-612 (683)
367 KOG0662 Cyclin-dependent kinas 100.0 1.1E-37 2.3E-42 235.0 13.8 259 23-292 2-289 (292)
368 KOG0196 Tyrosine kinase, EPH ( 100.0 3.1E-38 6.6E-43 282.5 12.4 257 17-281 623-890 (996)
369 KOG4645 MAPKKK (MAP kinase kin 100.0 3.6E-39 7.9E-44 301.6 6.4 255 23-292 1235-1500(1509)
370 KOG0199 ACK and related non-re 100.0 9.7E-38 2.1E-42 276.3 14.2 260 11-279 98-369 (1039)
371 KOG4278 Protein tyrosine kinas 100.0 3.7E-37 8E-42 269.8 16.5 252 17-276 261-517 (1157)
372 KOG4257 Focal adhesion tyrosin 100.0 5E-37 1.1E-41 268.9 16.9 248 22-278 388-645 (974)
373 KOG0669 Cyclin T-dependent kin 100.0 6.2E-39 1.3E-43 253.4 3.8 262 13-278 7-315 (376)
374 KOG1094 Discoidin domain recep 100.0 3.2E-37 7E-42 268.2 14.5 251 22-277 537-799 (807)
375 smart00220 S_TKc Serine/Threon 100.0 8.1E-36 1.7E-40 247.4 22.1 241 35-289 1-244 (244)
376 KOG0614 cGMP-dependent protein 100.0 5.1E-38 1.1E-42 269.3 7.3 263 19-291 416-682 (732)
377 KOG1035 eIF-2alpha kinase GCN2 100.0 3.7E-37 8E-42 286.8 13.3 251 23-282 479-875 (1351)
378 KOG0587 Traf2- and Nck-interac 100.0 1E-35 2.3E-40 269.4 20.5 255 23-291 19-287 (953)
379 KOG1290 Serine/threonine prote 100.0 6.2E-35 1.3E-39 249.3 20.0 132 21-153 76-222 (590)
380 KOG0608 Warts/lats-like serine 100.0 2.9E-35 6.3E-40 258.3 17.3 260 23-293 629-935 (1034)
381 KOG0695 Serine/threonine prote 100.0 4.1E-35 8.8E-40 240.6 16.8 270 16-292 243-522 (593)
382 PLN03225 Serine/threonine-prot 100.0 3.8E-35 8.2E-40 270.0 18.4 259 18-291 127-455 (566)
383 KOG1151 Tousled-like protein k 100.0 6.5E-36 1.4E-40 253.1 11.8 263 20-290 460-745 (775)
384 KOG0668 Casein kinase II, alph 100.0 7.4E-36 1.6E-40 232.9 11.1 260 21-294 36-330 (338)
385 PLN03224 probable serine/threo 100.0 6.5E-34 1.4E-38 256.1 23.4 262 19-290 141-504 (507)
386 PLN00113 leucine-rich repeat r 100.0 2.5E-34 5.5E-39 282.7 20.7 244 23-279 690-948 (968)
387 KOG1006 Mitogen-activated prot 100.0 2.8E-36 6.1E-41 239.9 5.2 254 18-278 59-327 (361)
388 KOG0670 U4/U6-associated splic 100.0 2.9E-35 6.3E-40 253.1 9.7 258 22-291 431-751 (752)
389 KOG0200 Fibroblast/platelet-de 100.0 3.2E-33 6.9E-38 259.5 21.1 255 17-278 290-575 (609)
390 KOG2052 Activin A type IB rece 100.0 5.6E-33 1.2E-37 235.1 17.2 246 20-272 208-493 (513)
391 KOG1025 Epidermal growth facto 100.0 5.7E-33 1.2E-37 250.0 14.5 248 21-277 694-952 (1177)
392 KOG3653 Transforming growth fa 100.0 7.6E-33 1.6E-37 235.9 14.4 253 19-278 206-499 (534)
393 KOG0665 Jun-N-terminal kinase 100.0 3.6E-33 7.8E-38 227.4 11.4 258 18-290 12-314 (369)
394 KOG0664 Nemo-like MAPK-related 100.0 1.3E-34 2.8E-39 231.6 1.9 265 22-298 52-355 (449)
395 KOG1027 Serine/threonine prote 100.0 2.4E-33 5.2E-38 253.0 9.7 248 28-295 514-776 (903)
396 KOG1152 Signal transduction se 100.0 6.6E-33 1.4E-37 241.2 10.9 199 22-223 560-771 (772)
397 cd00180 PKc Catalytic domain o 100.0 1.5E-30 3.2E-35 210.9 21.3 208 31-277 1-213 (215)
398 KOG0576 Mitogen-activated prot 100.0 4E-33 8.6E-38 246.1 6.2 256 23-290 15-275 (829)
399 KOG0984 Mitogen-activated prot 100.0 4.5E-31 9.7E-36 203.1 11.6 203 20-226 43-257 (282)
400 KOG1167 Serine/threonine prote 100.0 3.8E-31 8.2E-36 222.9 10.8 264 18-294 31-389 (418)
401 smart00221 STYKc Protein kinas 100.0 1.7E-29 3.8E-34 207.3 20.4 196 25-223 1-202 (225)
402 KOG1345 Serine/threonine kinas 100.0 7.8E-31 1.7E-35 209.5 10.0 251 15-269 16-275 (378)
403 KOG1024 Receptor-like protein 100.0 4.1E-30 8.9E-35 214.8 13.3 249 20-276 281-549 (563)
404 PLN00181 protein SPA1-RELATED; 100.0 5.9E-29 1.3E-33 239.2 11.0 201 76-293 29-272 (793)
405 KOG1164 Casein kinase (serine/ 100.0 8.9E-27 1.9E-31 201.7 22.5 252 24-278 19-293 (322)
406 smart00750 KIND kinase non-cat 99.9 5.1E-27 1.1E-31 185.9 14.9 165 104-291 1-170 (176)
407 KOG1163 Casein kinase (serine/ 99.9 3.5E-26 7.6E-31 180.2 14.9 253 17-273 9-275 (341)
408 KOG1165 Casein kinase (serine/ 99.9 1.8E-25 4E-30 183.6 19.2 252 19-274 24-291 (449)
409 KOG0590 Checkpoint kinase and 99.9 3.4E-26 7.5E-31 210.4 4.1 256 26-292 321-591 (601)
410 COG0515 SPS1 Serine/threonine 99.9 1.4E-22 3E-27 175.0 24.8 250 25-278 2-275 (384)
411 KOG0195 Integrin-linked kinase 99.9 5.3E-25 1.1E-29 176.6 7.9 245 20-276 187-440 (448)
412 PRK09188 serine/threonine prot 99.9 1.1E-23 2.3E-28 182.6 16.1 164 19-195 14-195 (365)
413 KOG0603 Ribosomal protein S6 k 99.9 8.2E-25 1.8E-29 193.6 3.5 245 30-295 1-252 (612)
414 PF14531 Kinase-like: Kinase-l 99.9 5.8E-23 1.3E-27 171.0 13.5 231 24-269 13-288 (288)
415 PRK10359 lipopolysaccharide co 99.9 1.4E-22 2.9E-27 164.0 11.0 170 21-215 29-216 (232)
416 cd05147 RIO1_euk RIO kinase fa 99.9 2.3E-22 5.1E-27 160.5 12.0 137 28-170 2-166 (190)
417 KOG1240 Protein kinase contain 99.9 3.4E-23 7.5E-28 192.6 5.6 237 24-278 24-291 (1431)
418 cd05145 RIO1_like RIO kinase f 99.9 2.3E-21 5E-26 155.3 14.4 139 27-171 1-167 (190)
419 PRK12274 serine/threonine prot 99.9 2.5E-21 5.4E-26 153.6 13.2 186 25-225 4-211 (218)
420 KOG4158 BRPK/PTEN-induced prot 99.9 2.5E-21 5.4E-26 163.0 13.7 195 77-277 274-509 (598)
421 KOG1023 Natriuretic peptide re 99.8 9.2E-21 2E-25 167.6 11.5 203 73-277 1-219 (484)
422 KOG0606 Microtubule-associated 99.8 9.6E-21 2.1E-25 176.1 11.9 229 17-293 77-322 (1205)
423 KOG1166 Mitotic checkpoint ser 99.8 2.1E-20 4.4E-25 176.3 11.7 198 18-219 693-901 (974)
424 smart00090 RIO RIO-like kinase 99.8 2.4E-19 5.3E-24 147.9 12.0 139 24-169 29-196 (237)
425 PRK10345 hypothetical protein; 99.8 1E-18 2.3E-23 140.9 15.3 134 27-166 6-154 (210)
426 PRK14879 serine/threonine prot 99.8 3.8E-18 8.2E-23 139.1 13.7 132 29-169 2-142 (211)
427 TIGR03724 arch_bud32 Kae1-asso 99.8 1.2E-17 2.7E-22 134.8 12.6 128 30-169 1-137 (199)
428 KOG1033 eIF-2alpha kinase PEK/ 99.7 1E-18 2.2E-23 152.3 4.8 178 92-290 329-516 (516)
429 cd05144 RIO2_C RIO kinase fami 99.7 2.1E-17 4.6E-22 133.3 11.4 133 24-169 16-173 (198)
430 PRK09605 bifunctional UGMP fam 99.7 5.2E-17 1.1E-21 149.9 14.9 135 23-170 333-476 (535)
431 KOG0590 Checkpoint kinase and 99.7 2.1E-18 4.6E-23 159.1 0.7 261 21-291 18-291 (601)
432 cd05119 RIO RIO kinase family, 99.7 2.2E-16 4.9E-21 126.1 9.0 132 28-169 2-162 (187)
433 PRK01723 3-deoxy-D-manno-octul 99.7 1.4E-15 3.1E-20 125.7 13.7 132 29-169 37-190 (239)
434 cd05120 APH_ChoK_like Aminogly 99.6 2E-15 4.3E-20 115.9 11.3 131 27-169 2-137 (155)
435 KOG1243 Protein kinase [Genera 99.6 3.5E-14 7.7E-19 127.6 16.1 167 41-217 30-199 (690)
436 KOG1266 Protein kinase [Signal 99.5 8E-15 1.7E-19 121.3 5.7 195 74-279 122-332 (458)
437 KOG0601 Cyclin-dependent kinas 99.5 8.2E-15 1.8E-19 130.2 6.0 244 21-276 112-377 (524)
438 cd05151 ChoK Choline Kinase (C 99.5 5.2E-13 1.1E-17 104.8 10.0 127 28-169 3-135 (170)
439 cd05146 RIO3_euk RIO kinase fa 99.4 4E-12 8.6E-17 101.0 12.2 134 28-169 2-172 (197)
440 TIGR01982 UbiB 2-polyprenylphe 99.4 3E-12 6.5E-17 114.9 12.5 137 29-171 123-307 (437)
441 KOG0606 Microtubule-associated 99.4 3.7E-13 8.1E-18 126.3 5.1 262 19-292 800-1098(1205)
442 KOG0601 Cyclin-dependent kinas 99.4 7.4E-13 1.6E-17 117.9 6.4 249 22-282 264-518 (524)
443 COG3642 Mn2+-dependent serine/ 99.4 7.7E-12 1.7E-16 96.3 10.5 129 29-169 2-139 (204)
444 KOG3087 Serine/threonine prote 99.4 1.4E-11 3E-16 94.6 11.5 141 27-169 11-164 (229)
445 KOG3741 Poly(A) ribonuclease s 99.3 6.4E-11 1.4E-15 104.1 16.8 212 37-279 290-522 (655)
446 PRK04750 ubiB putative ubiquin 99.3 1.1E-12 2.4E-17 119.3 6.0 140 24-171 121-314 (537)
447 KOG2137 Protein kinase [Signal 99.3 5.6E-13 1.2E-17 120.5 2.1 231 12-292 26-271 (700)
448 COG4248 Uncharacterized protei 99.3 6.7E-11 1.5E-15 101.7 13.4 239 25-273 13-291 (637)
449 cd05154 ACAD10_11_like Acyl-Co 99.2 2E-10 4.3E-15 94.1 11.1 139 29-169 4-205 (223)
450 PRK15123 lipopolysaccharide co 99.2 1.2E-09 2.7E-14 91.5 14.9 130 38-169 37-193 (268)
451 COG0478 RIO-like serine/threon 99.0 4.8E-09 1E-13 85.8 9.5 130 25-166 93-247 (304)
452 PF01163 RIO1: RIO1 family; I 98.9 1.3E-08 2.8E-13 80.7 11.3 122 38-169 1-154 (188)
453 PRK09902 hypothetical protein; 98.9 2.6E-08 5.6E-13 79.5 13.0 136 32-169 27-178 (216)
454 PF06293 Kdo: Lipopolysacchari 98.9 3.9E-08 8.5E-13 79.6 11.8 107 63-169 55-169 (206)
455 PF06176 WaaY: Lipopolysacchar 98.8 1.8E-07 3.8E-12 75.1 13.2 135 21-168 29-181 (229)
456 TIGR02172 Fb_sc_TIGR02172 Fibr 98.6 1.9E-06 4.1E-11 70.8 12.8 72 29-105 7-80 (226)
457 KOG1035 eIF-2alpha kinase GCN2 98.5 6.5E-07 1.4E-11 86.3 10.9 204 66-294 229-442 (1351)
458 COG0661 AarF Predicted unusual 98.5 1.5E-06 3.2E-11 79.1 10.6 136 29-170 131-314 (517)
459 COG2112 Predicted Ser/Thr prot 98.4 3.5E-06 7.6E-11 64.9 9.1 130 23-169 22-154 (201)
460 COG1718 RIO1 Serine/threonine 98.3 7.1E-06 1.5E-10 66.8 10.8 133 28-169 53-214 (268)
461 PF01636 APH: Phosphotransfera 98.3 1.3E-05 2.8E-10 65.9 11.9 78 28-108 2-84 (239)
462 cd05150 APH Aminoglycoside 3'- 98.2 1.9E-05 4.2E-10 65.7 11.8 76 30-109 5-82 (244)
463 PLN02876 acyl-CoA dehydrogenas 98.2 2.6E-05 5.5E-10 76.2 13.9 80 27-106 42-131 (822)
464 PF10707 YrbL-PhoP_reg: PhoP r 98.2 4.8E-05 1E-09 60.8 13.1 129 29-165 7-166 (199)
465 PF13095 FTA2: Kinetochore Sim 98.1 0.00033 7.1E-09 55.8 16.1 130 17-168 31-206 (207)
466 KOG1235 Predicted unusual prot 98.1 3.6E-05 7.8E-10 70.2 11.3 137 29-171 167-355 (538)
467 cd05155 APH_ChoK_like_1 Unchar 98.0 3.7E-05 8E-10 63.6 9.3 72 29-106 3-81 (235)
468 cd05157 ETNK_euk Ethanolamine 98.0 0.00011 2.5E-09 60.6 11.5 75 28-106 3-79 (235)
469 KOG2268 Serine/threonine prote 97.9 6.9E-06 1.5E-10 69.4 2.6 130 24-166 93-247 (465)
470 PRK10593 hypothetical protein; 97.9 0.00051 1.1E-08 58.9 13.5 80 24-106 15-100 (297)
471 TIGR02721 ycfN_thiK thiamine k 97.8 0.00014 3E-09 61.0 9.2 130 31-169 4-174 (256)
472 PRK09550 mtnK methylthioribose 97.8 0.0014 3.1E-08 58.2 15.3 76 28-105 31-117 (401)
473 KOG0576 Mitogen-activated prot 97.8 5.6E-06 1.2E-10 75.4 -0.0 238 24-280 243-486 (829)
474 cd05153 HomoserineK_II Homoser 97.7 0.00078 1.7E-08 57.7 11.6 137 27-169 18-204 (296)
475 PF12260 PIP49_C: Protein-kina 97.6 0.00028 6E-09 56.2 8.0 97 67-169 7-110 (188)
476 cd05156 ChoK_euk Choline Kinas 97.6 0.0006 1.3E-08 58.6 10.6 76 28-107 3-85 (302)
477 KOG2270 Serine/threonine prote 97.4 0.0014 2.9E-08 56.8 9.9 136 26-167 147-310 (520)
478 TIGR00938 thrB_alt homoserine 97.3 0.0063 1.4E-07 52.4 12.6 140 25-169 24-216 (307)
479 PRK05231 homoserine kinase; Pr 97.3 0.0042 9E-08 53.8 11.5 75 28-106 27-109 (319)
480 TIGR01767 MTRK 5-methylthiorib 97.2 0.0087 1.9E-07 52.2 12.8 72 30-103 2-84 (370)
481 PLN02236 choline kinase 97.1 0.006 1.3E-07 53.5 10.8 141 23-169 37-230 (344)
482 PRK12396 5-methylribose kinase 97.0 0.0063 1.4E-07 53.8 10.1 78 23-103 30-117 (409)
483 PLN02421 phosphotransferase, a 97.0 0.0065 1.4E-07 53.0 10.2 79 23-106 15-97 (330)
484 PLN02756 S-methyl-5-thioribose 97.0 0.022 4.7E-07 50.7 13.1 73 27-103 36-119 (418)
485 PF03881 Fructosamin_kin: Fruc 96.8 0.018 3.9E-07 49.0 10.4 76 25-104 19-97 (288)
486 cd05152 MPH2' Macrolide 2'-Pho 96.7 0.018 4E-07 48.8 9.9 30 139-169 186-215 (276)
487 COG3173 Predicted aminoglycosi 96.6 0.031 6.7E-07 48.1 10.6 139 25-172 27-230 (321)
488 PRK11768 serine/threonine prot 96.6 0.13 2.7E-06 44.8 14.5 70 35-105 37-113 (325)
489 KOG1093 Predicted protein kina 96.5 0.0054 1.2E-07 55.4 5.8 157 65-279 28-195 (725)
490 PF01633 Choline_kinase: Choli 96.5 0.0078 1.7E-07 48.8 6.2 55 48-106 2-57 (211)
491 TIGR02906 spore_CotS spore coa 96.4 0.14 3.1E-06 44.0 14.0 29 138-169 187-215 (313)
492 PTZ00384 choline kinase; Provi 96.4 0.044 9.6E-07 48.7 10.7 78 24-106 52-136 (383)
493 TIGR02904 spore_ysxE spore coa 96.3 0.14 3.1E-06 44.1 13.3 29 139-169 197-225 (309)
494 KOG1826 Ras GTPase activating 95.9 0.0015 3.3E-08 65.8 -0.9 202 69-278 1279-1492(2724)
495 COG5072 ALK1 Serine/threonine 95.6 0.043 9.2E-07 47.8 6.7 83 79-169 285-369 (488)
496 COG2334 Putative homoserine ki 95.1 0.13 2.9E-06 44.6 8.5 131 35-169 37-227 (331)
497 PF07387 Seadorna_VP7: Seadorn 95.1 0.13 2.8E-06 41.8 7.5 86 63-167 102-189 (308)
498 PTZ00296 choline kinase; Provi 95.0 0.31 6.7E-06 44.3 10.8 79 23-106 106-193 (442)
499 PF04655 APH_6_hur: Aminoglyco 94.8 0.14 3.1E-06 42.7 7.4 79 28-110 7-86 (253)
500 PRK06148 hypothetical protein; 94.6 1 2.2E-05 45.6 14.2 32 138-169 203-235 (1013)
No 1
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=9.9e-55 Score=360.27 Aligned_cols=258 Identities=29% Similarity=0.453 Sum_probs=229.4
Q ss_pred CCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeec--CCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCC-eEEE
Q 022401 20 HDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIER--GDKIDENVQREIINHRSLRHPNIVRFKEVILTPT-HLAI 96 (298)
Q Consensus 20 ~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~l 96 (298)
...++.+.++.||+|..|+||+++|+.+++.+|+|++.. +.....++.+|+++++..+||+|++++|+|.++. .+++
T Consensus 76 i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI 155 (364)
T KOG0581|consen 76 ISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISI 155 (364)
T ss_pred cCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEe
Confidence 344589999999999999999999999999999999943 4555678899999999999999999999999998 5999
Q ss_pred EEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhh-cCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC
Q 022401 97 VMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA-MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS 175 (298)
Q Consensus 97 v~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~-~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~ 175 (298)
+||||++|||...+...+.+++..+-.++.++++||.|||+ ++|+||||||+|||++..|+ +||+|||.+......
T Consensus 156 ~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGe--VKicDFGVS~~lvnS- 232 (364)
T KOG0581|consen 156 CMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGE--VKICDFGVSGILVNS- 232 (364)
T ss_pred ehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCC--EEeccccccHHhhhh-
Confidence 99999999999999988999999999999999999999995 99999999999999999998 999999998766555
Q ss_pred CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCC-CCchhHHHHHHHHhhcCC-CCCCCCCCCHH
Q 022401 176 QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDP-DEPKDFRKTIQRILSVQY-SVPDTNPISQE 253 (298)
Q Consensus 176 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 253 (298)
...+..||..|||||.+.+..|+.+ +||||||+.++|+++|+.||... .......+++..|+..+. ..|.. .++++
T Consensus 233 ~a~tfvGT~~YMsPERi~g~~Ys~~-sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~-~fS~e 310 (364)
T KOG0581|consen 233 IANTFVGTSAYMSPERISGESYSVK-SDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEG-EFSPE 310 (364)
T ss_pred hcccccccccccChhhhcCCcCCcc-cceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcc-cCCHH
Confidence 5677889999999999999999888 99999999999999999999886 334566777888877554 44443 58999
Q ss_pred HHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhh
Q 022401 254 CRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMF 290 (298)
Q Consensus 254 l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~ 290 (298)
+++||..||.+||.+|||+ .++++|||+.
T Consensus 311 f~~FV~~CL~Kdp~~R~s~--------~qLl~Hpfi~ 339 (364)
T KOG0581|consen 311 FRSFVSCCLRKDPSERPSA--------KQLLQHPFIK 339 (364)
T ss_pred HHHHHHHHhcCCcccCCCH--------HHHhcCHHHh
Confidence 9999999999999999987 6666888887
No 2
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.1e-55 Score=365.20 Aligned_cols=271 Identities=35% Similarity=0.548 Sum_probs=229.1
Q ss_pred CCCCcCCCCCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcc--------hHHHHHHHHHHhcCCCCCee
Q 022401 11 GPAMDMPIMHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKI--------DENVQREIINHRSLRHPNIV 82 (298)
Q Consensus 11 ~~~~~~~~~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~--------~~~~~~e~~~l~~l~h~~i~ 82 (298)
+.++..| -...+.|.+.+.||+|+||.|-+|..+.+|+.||||++.+.... .....+|+++|++|+||||+
T Consensus 161 d~~~~~p-ks~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV 239 (475)
T KOG0615|consen 161 DSSKVPP-KSFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIV 239 (475)
T ss_pred hhccCcc-chhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEE
Confidence 4444433 34788999999999999999999999999999999999763211 12357999999999999999
Q ss_pred eeeEEEEeCCeEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCC-CCCCEE
Q 022401 83 RFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGS-PAPRLK 161 (298)
Q Consensus 83 ~~~~~~~~~~~~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~-~~~~~~ 161 (298)
++++++..+...|+|+||++||.|.+.+-.+..+.+...+.+++|++.|+.|||++||+||||||+|||++.+ ....+|
T Consensus 240 ~~~d~f~~~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llK 319 (475)
T KOG0615|consen 240 RIKDFFEVPDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLK 319 (475)
T ss_pred EEeeeeecCCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999776 444599
Q ss_pred EeecCccccccCCCCCCCCCCCCcccCccccccccC--CCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhh
Q 022401 162 ICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRHEY--DGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILS 239 (298)
Q Consensus 162 l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~--~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 239 (298)
|.|||+|........-.+.+|++.|.|||++.+.+. ++.+.|+||+||++|.+++|.+||........+.+. +..
T Consensus 320 ItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQ---I~~ 396 (475)
T KOG0615|consen 320 ITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQ---ILK 396 (475)
T ss_pred ecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHH---Hhc
Confidence 999999997777777788999999999999987653 454589999999999999999999987665434333 333
Q ss_pred cCCC--CCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhhh
Q 022401 240 VQYS--VPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDAT 293 (298)
Q Consensus 240 ~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~~ 293 (298)
+.+. .+....++++..+||.+||..||++|||+ .++++|||+.+.+
T Consensus 397 G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~--------~eaL~hpW~~~~~ 444 (475)
T KOG0615|consen 397 GRYAFGPLQWDRISEEALDLINWMLVVDPENRPSA--------DEALNHPWFKDAP 444 (475)
T ss_pred CcccccChhhhhhhHHHHHHHHHhhEeCcccCcCH--------HHHhcChhhhccc
Confidence 4432 22344589999999999999999999987 5556899988543
No 3
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-52 Score=366.42 Aligned_cols=250 Identities=36% Similarity=0.598 Sum_probs=229.2
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeec----CCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEE
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIER----GDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
.+|..++.||+|||+.||.+++..+|..||+|++.+ .....+...+|++++++|+|||||+++++|++.+.+|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 679999999999999999999988999999999987 5667788999999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC-CCC
Q 022401 99 EYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH-SQP 177 (298)
Q Consensus 99 ~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~-~~~ 177 (298)
|.|..++|-.++....++++.++..+++||+.|+.|||+++|+|||||..|+|++++-+ +||+|||+|...... ...
T Consensus 98 ELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~--VKIgDFGLAt~le~~~Erk 175 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMN--VKIGDFGLATQLEYDGERK 175 (592)
T ss_pred EecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCc--EEecccceeeeecCccccc
Confidence 99999999999999999999999999999999999999999999999999999999888 999999999876655 555
Q ss_pred CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHH
Q 022401 178 KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDL 257 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (298)
.+.+|||.|+|||++...+.... +||||+||++|.|+.|.+||.. +.+.+...++...++..|. .++.+..+|
T Consensus 176 ~TlCGTPNYIAPEVl~k~gHsfE-vDiWSlGcvmYtLL~G~PPFet----k~vkety~~Ik~~~Y~~P~--~ls~~A~dL 248 (592)
T KOG0575|consen 176 KTLCGTPNYIAPEVLNKSGHSFE-VDIWSLGCVMYTLLVGRPPFET----KTVKETYNKIKLNEYSMPS--HLSAEAKDL 248 (592)
T ss_pred ceecCCCcccChhHhccCCCCCc-hhhhhhhhHHHhhhhCCCCccc----chHHHHHHHHHhcCccccc--ccCHHHHHH
Confidence 77889999999999998888777 9999999999999999999987 4457777887777777666 489999999
Q ss_pred HHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 258 ISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 258 i~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
|.+||+.||.+|||+ .+++.|+|+
T Consensus 249 I~~lL~~~P~~Rpsl--------~~vL~h~Ff 272 (592)
T KOG0575|consen 249 IRKLLRPNPSERPSL--------DEVLDHPFF 272 (592)
T ss_pred HHHHhcCCcccCCCH--------HHHhcCHhh
Confidence 999999999999988 555578888
No 4
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-52 Score=343.15 Aligned_cols=263 Identities=32% Similarity=0.525 Sum_probs=230.3
Q ss_pred CCCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCe
Q 022401 18 IMHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRSLRHPNIVRFKEVILTPTH 93 (298)
Q Consensus 18 ~~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 93 (298)
.....++|+++++||.|+||.||.++.+.+++.||+|++.+.. ......++|..+|.+++||.||+++..|.+.+.
T Consensus 20 ~~~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~k 99 (357)
T KOG0598|consen 20 EMVGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEK 99 (357)
T ss_pred ccCChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCe
Confidence 3566789999999999999999999999999999999987642 334567889999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccC
Q 022401 94 LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 173 (298)
Q Consensus 94 ~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~ 173 (298)
+|+|++|+.||.|...+++.+.+++..++.++..|+.||.|||+.||+||||||+|||+|.+|+ ++|+|||+|.....
T Consensus 100 LylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GH--i~LtDFgL~k~~~~ 177 (357)
T KOG0598|consen 100 LYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGH--IKLTDFGLCKEDLK 177 (357)
T ss_pred EEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCc--EEEeccccchhccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999 99999999984443
Q ss_pred C-CCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCH
Q 022401 174 H-SQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQ 252 (298)
Q Consensus 174 ~-~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (298)
. ......+||+.|||||++.+.+++.. +|.||||+++|+|++|..||...+. .+..+++..+... ..+..++.
T Consensus 178 ~~~~t~tfcGT~eYmAPEil~~~gy~~~-vDWWsLGillYeML~G~pPF~~~~~----~~~~~~I~~~k~~-~~p~~ls~ 251 (357)
T KOG0598|consen 178 DGDATRTFCGTPEYMAPEILLGKGYDKA-VDWWSLGILLYEMLTGKPPFYAEDV----KKMYDKILKGKLP-LPPGYLSE 251 (357)
T ss_pred CCCccccccCCccccChHHHhcCCCCcc-cchHhHHHHHHHHhhCCCCCcCccH----HHHHHHHhcCcCC-CCCccCCH
Confidence 3 44556689999999999999988766 9999999999999999999999765 5556666555522 22223799
Q ss_pred HHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 253 ECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 253 ~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
+.+++++.+|+.||++|.. .......+-.|||+.++
T Consensus 252 ~ardll~~LL~rdp~~RLg----~~~d~~~ik~HpfF~~i 287 (357)
T KOG0598|consen 252 EARDLLKKLLKRDPRQRLG----GPGDAEEIKRHPFFKGI 287 (357)
T ss_pred HHHHHHHHHhccCHHHhcC----CCCChHHhhcCcccccC
Confidence 9999999999999999986 23356778999999865
No 5
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-51 Score=340.39 Aligned_cols=260 Identities=35% Similarity=0.565 Sum_probs=225.1
Q ss_pred CCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC---cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEE
Q 022401 19 MHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD---KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLA 95 (298)
Q Consensus 19 ~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 95 (298)
+...++|.+.+.||.|+|++||+++++.++..||||.+.+.. +..+.+.+|+.+|+.++||||+.+++++++++.+|
T Consensus 6 ~~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~ 85 (429)
T KOG0595|consen 6 MRVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIY 85 (429)
T ss_pred ccccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEE
Confidence 445689999999999999999999999999999999997653 34456778999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCC-CC---CCEEEeecCccccc
Q 022401 96 IVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGS-PA---PRLKICDFGYSKSS 171 (298)
Q Consensus 96 lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~-~~---~~~~l~d~~~~~~~ 171 (298)
+|||||+||+|.+++...+.+++.+++.++.||+.|+++||+++|+||||||.|||++.. +. +.+||.|||+++..
T Consensus 86 lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L 165 (429)
T KOG0595|consen 86 LVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL 165 (429)
T ss_pred EEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence 999999999999999999999999999999999999999999999999999999999764 32 56999999999988
Q ss_pred cCCCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCC-CCCC
Q 022401 172 VLHSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPD-TNPI 250 (298)
Q Consensus 172 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 250 (298)
.........+|++.|||||++....|+.+ +|+||+|+++|+|++|..||......+.+. .+..+....+. +...
T Consensus 166 ~~~~~a~tlcGSplYMAPEV~~~~~YdAK-ADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~----~~~k~~~~~~~~~~~~ 240 (429)
T KOG0595|consen 166 QPGSMAETLCGSPLYMAPEVIMSQQYDAK-ADLWSIGTILYQCLTGKPPFDAETPKELLL----YIKKGNEIVPVLPAEL 240 (429)
T ss_pred CchhHHHHhhCCccccCHHHHHhccccch-hhHHHHHHHHHHHHhCCCCccccCHHHHHH----HHhccccccCchhhhc
Confidence 87788888899999999999999999888 999999999999999999999876543332 22222222222 2235
Q ss_pred CHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 251 SQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 251 ~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
+..+.+++...++.||.+|.++ .+.+.|+++..
T Consensus 241 s~~~~~Ll~~ll~~~~~~~~~~--------~~~~~~~~l~~ 273 (429)
T KOG0595|consen 241 SNPLRELLISLLQRNPKDRISF--------EDFFDHPFLAA 273 (429)
T ss_pred cCchhhhhhHHHhcCccccCch--------HHhhhhhhccc
Confidence 6678899999999999999965 77778888763
No 6
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-49 Score=343.89 Aligned_cols=258 Identities=47% Similarity=0.769 Sum_probs=228.7
Q ss_pred CCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC-----C-cchHHHHHHHHHHhcCC-CCCeeeeeEEEEeC
Q 022401 19 MHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG-----D-KIDENVQREIINHRSLR-HPNIVRFKEVILTP 91 (298)
Q Consensus 19 ~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~-----~-~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~ 91 (298)
....++|++++.||+|+||.|+.|++..++..||+|++.+. . ...+.+.+|+.++++++ ||||+++++++...
T Consensus 13 ~~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~ 92 (370)
T KOG0583|consen 13 QLSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATP 92 (370)
T ss_pred ccccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecC
Confidence 35568999999999999999999999999999999976653 1 23556778999999998 99999999999999
Q ss_pred CeEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCC-CCCCEEEeecCcccc
Q 022401 92 THLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGS-PAPRLKICDFGYSKS 170 (298)
Q Consensus 92 ~~~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~-~~~~~~l~d~~~~~~ 170 (298)
..+++||||+.||.|.+.+.+.+++.+.++..+++|++.|++|+|++|++||||||+|++++.+ ++ +||+|||++..
T Consensus 93 ~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~--~Kl~DFG~s~~ 170 (370)
T KOG0583|consen 93 TKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGN--LKLSDFGLSAI 170 (370)
T ss_pred CeEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCC--EEEeccccccc
Confidence 9999999999999999999998999999999999999999999999999999999999999988 66 99999999986
Q ss_pred c-cCCCCCCCCCCCCcccCcccccccc-CCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCC
Q 022401 171 S-VLHSQPKSTVGTPAYIAPEVLLRHE-YDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTN 248 (298)
Q Consensus 171 ~-~~~~~~~~~~~~~~~~aPE~~~~~~-~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (298)
. ..........|++.|+|||.+.+.. |..+++||||+|+++|.|++|..||...+. .....++..+.+..+..-
T Consensus 171 ~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~----~~l~~ki~~~~~~~p~~~ 246 (370)
T KOG0583|consen 171 SPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNV----PNLYRKIRKGEFKIPSYL 246 (370)
T ss_pred cCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccH----HHHHHHHhcCCccCCCCc
Confidence 6 4566778889999999999999988 988889999999999999999999998443 555666777887777663
Q ss_pred CCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 249 PISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 249 ~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
. +.++.+++++||..||.+|+|+.+++ .|||++.
T Consensus 247 ~-S~~~~~Li~~mL~~~P~~R~t~~~i~--------~h~w~~~ 280 (370)
T KOG0583|consen 247 L-SPEARSLIEKMLVPDPSTRITLLEIL--------EHPWFQK 280 (370)
T ss_pred C-CHHHHHHHHHHcCCCcccCCCHHHHh--------hChhhcc
Confidence 3 99999999999999999999875444 6777764
No 7
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-49 Score=343.16 Aligned_cols=257 Identities=31% Similarity=0.516 Sum_probs=222.6
Q ss_pred CCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhcC-CCCCeeeeeEEEEeCCe
Q 022401 19 MHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRSL-RHPNIVRFKEVILTPTH 93 (298)
Q Consensus 19 ~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~ 93 (298)
.-...+|.+++.||+|+|++|++|+.+.+++.||||++.+.. +..+.+..|-..|.+| .||+|++++-.|.|+..
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 356789999999999999999999999999999999987642 2234466788899999 89999999999999999
Q ss_pred EEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccC
Q 022401 94 LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 173 (298)
Q Consensus 94 ~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~ 173 (298)
+|+|++|+++|.|.+++...+.+++.-.+.++.+|+.||+|||++|||||||||+|||++.+++ ++|.|||.+.....
T Consensus 149 LYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmh--ikITDFGsAK~l~~ 226 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGH--IKITDFGSAKILSP 226 (604)
T ss_pred eEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCc--EEEeeccccccCCh
Confidence 9999999999999999999999999999999999999999999999999999999999999998 99999999863322
Q ss_pred CCC--------------CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhh
Q 022401 174 HSQ--------------PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILS 239 (298)
Q Consensus 174 ~~~--------------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 239 (298)
... .....|+..|.+||++..+..+.. +|||+|||++|+|+.|.+||.+.++. ...++|+.
T Consensus 227 ~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~-sDiWAlGCilyQmlaG~PPFra~Ney----liFqkI~~ 301 (604)
T KOG0592|consen 227 SQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPS-SDLWALGCILYQMLAGQPPFRAANEY----LIFQKIQA 301 (604)
T ss_pred hhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcc-cchHHHHHHHHHHhcCCCCCccccHH----HHHHHHHH
Confidence 111 133568999999999977766555 99999999999999999999998884 45556666
Q ss_pred cCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 240 VQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 240 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
..+.++.. .|+...+||.++|..||.+|+|+ .++-+|||+.+.
T Consensus 302 l~y~fp~~--fp~~a~dLv~KLLv~dp~~Rlt~--------~qIk~HpFF~~V 344 (604)
T KOG0592|consen 302 LDYEFPEG--FPEDARDLIKKLLVRDPSDRLTS--------QQIKAHPFFEGV 344 (604)
T ss_pred hcccCCCC--CCHHHHHHHHHHHccCccccccH--------HHHhhCcccccC
Confidence 66665554 78999999999999999999988 666688888754
No 8
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=6.7e-50 Score=322.67 Aligned_cols=258 Identities=25% Similarity=0.450 Sum_probs=216.0
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc---chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEe
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK---IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVME 99 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~ 99 (298)
++|+.+.++|+|++|+||+++++.+|+.||||.+..+.. ..+...+|+.+|++|+|+|+|.++++|.....+++|||
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 689999999999999999999999999999999976433 34556799999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccC-CCCC
Q 022401 100 YASGGELFERICNAG-RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL-HSQP 177 (298)
Q Consensus 100 ~~~~~sL~~~l~~~~-~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~-~~~~ 177 (298)
||+. ++.+.++..+ .++...++.++.|++.|+.|+|+++++||||||+||+++.+|. +||||||+|+.... ....
T Consensus 82 ~~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gv--vKLCDFGFAR~L~~pgd~Y 158 (396)
T KOG0593|consen 82 YCDH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGV--VKLCDFGFARTLSAPGDNY 158 (396)
T ss_pred ecch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCc--EEeccchhhHhhcCCcchh
Confidence 9987 4555555544 5899999999999999999999999999999999999999998 99999999986663 3333
Q ss_pred CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhc---------------CC
Q 022401 178 KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSV---------------QY 242 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~---------------~~ 242 (298)
.....+.+|.|||.+.+...+.+..|||++||++.||++|...|.+..+.+++....+.+... ..
T Consensus 159 TDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv 238 (396)
T KOG0593|consen 159 TDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGV 238 (396)
T ss_pred hhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeee
Confidence 445578899999999998777777999999999999999999999998888766554443211 11
Q ss_pred CCCCCC----------CCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 243 SVPDTN----------PISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 243 ~~~~~~----------~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
++|.+. +++.-+.+|+..||+.||.+|+ +|.+++.|||+++
T Consensus 239 ~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~--------sc~qll~H~yFd~ 289 (396)
T KOG0593|consen 239 RLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRL--------SCEQLLHHPYFDG 289 (396)
T ss_pred ecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccc--------cHHHHhcChHHHH
Confidence 223222 3556799999999999999999 5577778888854
No 9
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-48 Score=343.66 Aligned_cols=254 Identities=36% Similarity=0.692 Sum_probs=234.6
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEE
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIV 97 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 97 (298)
.+-|++++.||.|+.|.|-+|++..+|+.+|||++.+.. .....+.+|+.+++-+.|||++.++++++....+|+|
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylv 90 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLV 90 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEE
Confidence 457999999999999999999999999999999997652 2335578999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCC
Q 022401 98 MEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP 177 (298)
Q Consensus 98 ~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~ 177 (298)
.||++||-|.+++-..+++++.+...+++||+.|+.|+|..+|+||||||+|++++..++ +||+|||+|.....+...
T Consensus 91 lEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~n--IKIADFGMAsLe~~gklL 168 (786)
T KOG0588|consen 91 LEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNN--IKIADFGMASLEVPGKLL 168 (786)
T ss_pred EEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccC--EeeeccceeecccCCccc
Confidence 999999999999999999999999999999999999999999999999999999999988 999999999988888888
Q ss_pred CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHH
Q 022401 178 KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDL 257 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (298)
.+.+|.+.|.+||++.+.+|...++||||-|+++|.|++|.+||++ +.+..+..+++.+.+..|.. ++.+.++|
T Consensus 169 eTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD----dNir~LLlKV~~G~f~MPs~--Is~eaQdL 242 (786)
T KOG0588|consen 169 ETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD----DNIRVLLLKVQRGVFEMPSN--ISSEAQDL 242 (786)
T ss_pred cccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC----ccHHHHHHHHHcCcccCCCc--CCHHHHHH
Confidence 9999999999999999999999999999999999999999999995 55688888889999988744 89999999
Q ss_pred HHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 258 ISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 258 i~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
|++||..||++|+|. .+++.|||++.
T Consensus 243 Lr~ml~VDp~~RiT~--------~eI~kHP~l~g 268 (786)
T KOG0588|consen 243 LRRMLDVDPSTRITT--------EEILKHPFLSG 268 (786)
T ss_pred HHHHhccCccccccH--------HHHhhCchhhc
Confidence 999999999999988 55557888864
No 10
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-48 Score=312.06 Aligned_cols=258 Identities=30% Similarity=0.539 Sum_probs=232.3
Q ss_pred CCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEE
Q 022401 20 HDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLA 95 (298)
Q Consensus 20 ~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 95 (298)
...++|++++.||.|+||.|-+++++.+|..||+|+..+.. +..+...+|..+|+.+.||.++++.+.+.+.+.+|
T Consensus 41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~ly 120 (355)
T KOG0616|consen 41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLY 120 (355)
T ss_pred cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEE
Confidence 66789999999999999999999999999999999988753 33355778999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC
Q 022401 96 IVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS 175 (298)
Q Consensus 96 lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~ 175 (298)
+||+|.+||.|.+++...+++++...+.++.+|+.|++|||+++|++|||||+||++|.+|+ +|+.|||++......
T Consensus 121 mvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~--iKitDFGFAK~v~~r- 197 (355)
T KOG0616|consen 121 MVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGH--IKITDFGFAKRVSGR- 197 (355)
T ss_pred EEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCc--EEEEeccceEEecCc-
Confidence 99999999999999999999999999999999999999999999999999999999999999 999999999855433
Q ss_pred CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHH
Q 022401 176 QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECR 255 (298)
Q Consensus 176 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 255 (298)
....+|+|.|+|||.+..+++... +|-|+||+++|||+.|..||...+. .+..++|+.+....|.. .+.+++
T Consensus 198 -T~TlCGTPeYLAPEii~sk~ynka-vDWWalGVLIYEMlaG~pPF~~~~~----~~iY~KI~~~~v~fP~~--fs~~~k 269 (355)
T KOG0616|consen 198 -TWTLCGTPEYLAPEIIQSKGYNKA-VDWWALGVLIYEMLAGYPPFYDDNP----IQIYEKILEGKVKFPSY--FSSDAK 269 (355)
T ss_pred -EEEecCCccccChHHhhcCCCCcc-hhHHHHHHHHHHHHcCCCCCcCCCh----HHHHHHHHhCcccCCcc--cCHHHH
Confidence 567889999999999998888665 9999999999999999999998765 67788888888877665 799999
Q ss_pred HHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 256 DLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 256 ~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
+||+.+|+.|-.+|..- +.+=..++-+|||+.+
T Consensus 270 dLl~~LL~vD~t~R~gn---lknG~~dIk~H~wF~~ 302 (355)
T KOG0616|consen 270 DLLKKLLQVDLTKRFGN---LKNGVEDIKNHPWFKG 302 (355)
T ss_pred HHHHHHHhhhhHhhhcC---cCCCccccccCccccc
Confidence 99999999999999432 2333678889999974
No 11
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.4e-50 Score=320.74 Aligned_cols=253 Identities=29% Similarity=0.439 Sum_probs=216.2
Q ss_pred CCCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC---CcchHHHHHHHHHHhcCCCCCeeeeeE-EEEeC-C
Q 022401 18 IMHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG---DKIDENVQREIINHRSLRHPNIVRFKE-VILTP-T 92 (298)
Q Consensus 18 ~~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~-~~~~~-~ 92 (298)
+.....+|++.++||.|.||.||++++..+|..+|.|.+..+ .+..+...+|+.+|++|+||||++.++ .+..+ +
T Consensus 14 ~~~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~e 93 (375)
T KOG0591|consen 14 PQKTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNE 93 (375)
T ss_pred CcccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccch
Confidence 556668899999999999999999999999999999998754 344566889999999999999999998 34444 4
Q ss_pred eEEEEEeccCCCCHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHhh--cC--cEEecCCCCceEeeCCCCCCEEEee
Q 022401 93 HLAIVMEYASGGELFERIC----NAGRFSEDEARFFFQQLISGVSYCHA--MQ--VCHRDLKLENTLLDGSPAPRLKICD 164 (298)
Q Consensus 93 ~~~lv~~~~~~~sL~~~l~----~~~~~~~~~~~~i~~~l~~~l~~Lh~--~~--i~H~dl~p~nilv~~~~~~~~~l~d 164 (298)
.+++|||+|++|+|...+. +...+++.++|.++.|++.||.++|+ .. ++||||||.||+++.+|. +||+|
T Consensus 94 vlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gv--vKLGD 171 (375)
T KOG0591|consen 94 VLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGV--VKLGD 171 (375)
T ss_pred hhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCc--eeecc
Confidence 5899999999999988874 34469999999999999999999998 55 999999999999999998 99999
Q ss_pred cCccccccCCCC-CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCC
Q 022401 165 FGYSKSSVLHSQ-PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYS 243 (298)
Q Consensus 165 ~~~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 243 (298)
||+++....... ..+..|||.|||||.+.+.+|+.+ +||||+||++|||...+.||.+. .+..+.++|..+++.
T Consensus 172 fGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~k-SDiWslGCllyEMcaL~~PF~g~----n~~~L~~KI~qgd~~ 246 (375)
T KOG0591|consen 172 FGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFK-SDIWSLGCLLYEMCALQSPFYGD----NLLSLCKKIEQGDYP 246 (375)
T ss_pred chhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcc-hhHHHHHHHHHHHHhcCCCcccc----cHHHHHHHHHcCCCC
Confidence 999985554433 345579999999999999999888 99999999999999999999985 567777888887664
Q ss_pred CCCCCCCCHHHHHHHHHhhhhCCCCcccccccch
Q 022401 244 VPDTNPISQECRDLISRIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 244 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~ 277 (298)
.-....++.++.++|..|+..||+.||+...++.
T Consensus 247 ~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~ 280 (375)
T KOG0591|consen 247 PLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQ 280 (375)
T ss_pred CCcHHHhhhHHHHHHHHHccCCcccCCCcchHHH
Confidence 2222448899999999999999999998654443
No 12
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-48 Score=325.08 Aligned_cols=259 Identities=31% Similarity=0.458 Sum_probs=212.4
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcc-hHHHHHHHHHHhcCCCCCeeeeeEEEEeCC--eEEEEE
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKI-DENVQREIINHRSLRHPNIVRFKEVILTPT--HLAIVM 98 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~ 98 (298)
..+|..++.||+|+||.||.+.+..+|...|+|........ .+.+.+|+.+|.+++|||||+++|...... .+++.|
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m 95 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM 95 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence 56799999999999999999999988999999998775221 456889999999999999999999854444 699999
Q ss_pred eccCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeC-CCCCCEEEeecCccccccC---
Q 022401 99 EYASGGELFERICNAG-RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDG-SPAPRLKICDFGYSKSSVL--- 173 (298)
Q Consensus 99 ~~~~~~sL~~~l~~~~-~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~-~~~~~~~l~d~~~~~~~~~--- 173 (298)
||+++|+|.+++.+.+ .+++..+..+.+|+++||.|||++|++||||||+|||++. ++. +||+|||++.....
T Consensus 96 Ey~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~--~KlaDFG~a~~~~~~~~ 173 (313)
T KOG0198|consen 96 EYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGD--VKLADFGLAKKLESKGT 173 (313)
T ss_pred eccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCe--EEeccCccccccccccc
Confidence 9999999999998877 8999999999999999999999999999999999999998 577 99999999875553
Q ss_pred -CCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCH
Q 022401 174 -HSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQ 252 (298)
Q Consensus 174 -~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (298)
........|++.|||||++.......+++|||||||++.||+||..||.... ....... .+.........+..+++
T Consensus 174 ~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~--~~~~~~~-~ig~~~~~P~ip~~ls~ 250 (313)
T KOG0198|consen 174 KSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFF--EEAEALL-LIGREDSLPEIPDSLSD 250 (313)
T ss_pred cccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhc--chHHHHH-HHhccCCCCCCCcccCH
Confidence 2223456799999999999864333445999999999999999999998741 1112222 22222212244555899
Q ss_pred HHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhhh
Q 022401 253 ECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDAT 293 (298)
Q Consensus 253 ~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~~ 293 (298)
+.++||+.||+.||++|||+ .++++|||+....
T Consensus 251 ~a~~Fl~~C~~~~p~~Rpta--------~eLL~hpf~~~~~ 283 (313)
T KOG0198|consen 251 EAKDFLRKCFKRDPEKRPTA--------EELLEHPFLKQNS 283 (313)
T ss_pred HHHHHHHHHhhcCcccCcCH--------HHHhhChhhhccc
Confidence 99999999999999999988 6666888887543
No 13
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-49 Score=336.53 Aligned_cols=264 Identities=30% Similarity=0.433 Sum_probs=222.7
Q ss_pred CCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHH--HHHHHHHHhcCC-CCCeeeeeEEEEeCC-eE
Q 022401 19 MHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDEN--VQREIINHRSLR-HPNIVRFKEVILTPT-HL 94 (298)
Q Consensus 19 ~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~--~~~e~~~l~~l~-h~~i~~~~~~~~~~~-~~ 94 (298)
....++|.++++||.|.||.||+|+...++..||||..++.-..-++ -.+|+..|+++. ||||+++.+++.+.. .+
T Consensus 6 ~~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L 85 (538)
T KOG0661|consen 6 VIFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRIL 85 (538)
T ss_pred hhHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceE
Confidence 34557999999999999999999999999999999987765433333 458999999998 999999999999887 99
Q ss_pred EEEEeccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccC
Q 022401 95 AIVMEYASGGELFERICNA-GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 173 (298)
Q Consensus 95 ~lv~~~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~ 173 (298)
++|||||+. +|.+++..+ ..+++..+..|+.||++||+|+|++|+.|||+||+|||+..... +||+|||+|+....
T Consensus 86 ~fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~--iKiaDFGLARev~S 162 (538)
T KOG0661|consen 86 YFVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDV--IKIADFGLAREVRS 162 (538)
T ss_pred eeeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccce--eEeccccccccccc
Confidence 999999954 899988655 46999999999999999999999999999999999999987665 99999999998777
Q ss_pred CCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcC------------
Q 022401 174 HSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQ------------ 241 (298)
Q Consensus 174 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~------------ 241 (298)
.........|.+|.|||++....+++.+.|+|++||+++|+.+.+..|.+.++.+++-++..-+....
T Consensus 163 kpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~ 242 (538)
T KOG0661|consen 163 KPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLAS 242 (538)
T ss_pred CCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHH
Confidence 77777777899999999998888877779999999999999999999999988777666554432221
Q ss_pred ---CCCCCC---------CCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhhh
Q 022401 242 ---YSVPDT---------NPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDAT 293 (298)
Q Consensus 242 ---~~~~~~---------~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~~ 293 (298)
+++|.. .+.+.+..++|.+||++||.+|||+. ++++|||++...
T Consensus 243 ~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~--------~al~~pffq~~~ 298 (538)
T KOG0661|consen 243 AMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTAS--------QALQHPFFQVGR 298 (538)
T ss_pred HhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHH--------HHhcCccccccc
Confidence 122211 13678999999999999999999994 555788887543
No 14
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=2e-47 Score=330.19 Aligned_cols=255 Identities=31% Similarity=0.433 Sum_probs=217.0
Q ss_pred CCCCCCCCCeeEEeeeccCCeEEEEEEEEccCCcE-EEEEEeecCCcc---hHHHHHHHHHHhcCCCCCeeeeeEEEEeC
Q 022401 16 MPIMHDSDRYDFVRDIGSGNFGVARLMRDKVTKEL-VAVKYIERGDKI---DENVQREIINHRSLRHPNIVRFKEVILTP 91 (298)
Q Consensus 16 ~~~~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~-~aiK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 91 (298)
.....+..+..+.+.+|.|+||+||.+.++ |+. +|+|++...... ...|.+|+.++.+++||||++++|++.++
T Consensus 34 ~~~~i~~~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~ 111 (362)
T KOG0192|consen 34 PEEEIDPDELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSP 111 (362)
T ss_pred cceecChHHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 334555677788888999999999999997 444 999998765433 45899999999999999999999999888
Q ss_pred C-eEEEEEeccCCCCHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHhhcC-cEEecCCCCceEeeCCC-CCCEEEeecC
Q 022401 92 T-HLAIVMEYASGGELFERICN--AGRFSEDEARFFFQQLISGVSYCHAMQ-VCHRDLKLENTLLDGSP-APRLKICDFG 166 (298)
Q Consensus 92 ~-~~~lv~~~~~~~sL~~~l~~--~~~~~~~~~~~i~~~l~~~l~~Lh~~~-i~H~dl~p~nilv~~~~-~~~~~l~d~~ 166 (298)
. .+++|+||+++|+|.+++.. ...++...+..++.+|+.|++|||+.+ |+|+||||+|||++.++ + +||+|||
T Consensus 112 ~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~--~KI~DFG 189 (362)
T KOG0192|consen 112 PGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKT--LKIADFG 189 (362)
T ss_pred CCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCE--EEECCCc
Confidence 7 79999999999999999987 678999999999999999999999999 99999999999999887 6 9999999
Q ss_pred ccccccCC-CCCCCCCCCCcccCccccc--cccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCC
Q 022401 167 YSKSSVLH-SQPKSTVGTPAYIAPEVLL--RHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYS 243 (298)
Q Consensus 167 ~~~~~~~~-~~~~~~~~~~~~~aPE~~~--~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 243 (298)
+++..... .......|++.|||||.+. ...++.+ +||||||+++|||+||..||..... ......+.....+
T Consensus 190 lsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K-~DvySFgIvlWEl~t~~~Pf~~~~~----~~~~~~v~~~~~R 264 (362)
T KOG0192|consen 190 LSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEK-SDVYSFGIVLWELLTGEIPFEDLAP----VQVASAVVVGGLR 264 (362)
T ss_pred cceeeccccccccCCCCCccccChhhhcCCCCcCCcc-chhhhHHHHHHHHHHCCCCCCCCCH----HHHHHHHHhcCCC
Confidence 99755543 3333468999999999998 4567666 9999999999999999999998765 3444445445555
Q ss_pred CCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhh
Q 022401 244 VPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMS 279 (298)
Q Consensus 244 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~ 279 (298)
...+..+++.+.+++.+||+.||.+||++.+++.+.
T Consensus 265 p~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l 300 (362)
T KOG0192|consen 265 PPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRL 300 (362)
T ss_pred CCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHH
Confidence 555555899999999999999999999999999644
No 15
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.5e-48 Score=337.65 Aligned_cols=251 Identities=33% Similarity=0.581 Sum_probs=225.7
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcch---HHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEe
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKID---ENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVME 99 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~ 99 (298)
++|-+.+.||+|+||.||+++++.+.+.||+|.+.+..+.. ..+.+|++|+++++||||+.++++|+...++++|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 68999999999999999999999999999999998765554 456789999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCC-C
Q 022401 100 YASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP-K 178 (298)
Q Consensus 100 ~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~-~ 178 (298)
|+.| +|...++..+.+++..+..++.+++.||.|||+.+|.|+|+||.||+++.++. +|++|||+++........ .
T Consensus 82 ~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~--~KlcdFg~Ar~m~~~t~vlt 158 (808)
T KOG0597|consen 82 YAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGT--LKLCDFGLARAMSTNTSVLT 158 (808)
T ss_pred hhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCc--eeechhhhhhhcccCceeee
Confidence 9977 99999999999999999999999999999999999999999999999999988 999999999866655433 3
Q ss_pred CCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHH
Q 022401 179 STVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLI 258 (298)
Q Consensus 179 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (298)
.-.|+|.|||||...+..|+.. +|+|||||++||++.|++||-.. .+...++.|...+..+|.. .+.++..|+
T Consensus 159 sikGtPlYmAPElv~e~pyd~~-sDlWslGcilYE~~~G~PPF~a~----si~~Lv~~I~~d~v~~p~~--~S~~f~nfl 231 (808)
T KOG0597|consen 159 SIKGTPLYMAPELVEEQPYDHT-SDLWSLGCILYELYVGQPPFYAR----SITQLVKSILKDPVKPPST--ASSSFVNFL 231 (808)
T ss_pred eccCcccccCHHHHcCCCccch-hhHHHHHHHHHHHhcCCCCchHH----HHHHHHHHHhcCCCCCccc--ccHHHHHHH
Confidence 3459999999999998888777 99999999999999999999873 4567777777777766663 799999999
Q ss_pred HHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 259 SRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 259 ~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
..+|.+||.+|. .|-++++|||..+
T Consensus 232 ~gLL~kdP~~Rl--------tW~~Ll~HpF~k~ 256 (808)
T KOG0597|consen 232 QGLLIKDPAQRL--------TWTDLLGHPFWKG 256 (808)
T ss_pred HHHhhcChhhcc--------cHHHHhcChHHhh
Confidence 999999999999 4688889999764
No 16
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-48 Score=330.49 Aligned_cols=261 Identities=34% Similarity=0.566 Sum_probs=222.9
Q ss_pred CCCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc---------------chHHHHHHHHHHhcCCCCCee
Q 022401 18 IMHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK---------------IDENVQREIINHRSLRHPNIV 82 (298)
Q Consensus 18 ~~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~---------------~~~~~~~e~~~l~~l~h~~i~ 82 (298)
.....++|++++.||+|.||.|-+|++..+++.||+|++.+... ..+...+|+.++++++|||||
T Consensus 92 ~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV 171 (576)
T KOG0585|consen 92 DRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVV 171 (576)
T ss_pred cceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCee
Confidence 35567899999999999999999999999999999999865321 125788999999999999999
Q ss_pred eeeEEEEeC--CeEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCE
Q 022401 83 RFKEVILTP--THLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRL 160 (298)
Q Consensus 83 ~~~~~~~~~--~~~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~ 160 (298)
+++++.-+. ..+|+|+|||..|.+...-.....+++.+.+.++++++.||+|||.+||+||||||+|+|++++|. +
T Consensus 172 ~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~--V 249 (576)
T KOG0585|consen 172 KLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGT--V 249 (576)
T ss_pred EEEEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCc--E
Confidence 999998765 579999999998877554433444899999999999999999999999999999999999999987 9
Q ss_pred EEeecCccccccCC------CCCCCCCCCCcccCcccccc---ccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHH
Q 022401 161 KICDFGYSKSSVLH------SQPKSTVGTPAYIAPEVLLR---HEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFR 231 (298)
Q Consensus 161 ~l~d~~~~~~~~~~------~~~~~~~~~~~~~aPE~~~~---~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~ 231 (298)
||+|||.+...... .+.....|+|.|+|||.+.+ ..+..++.||||+|++||.|+.|+.||.+... .
T Consensus 250 KIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~----~ 325 (576)
T KOG0585|consen 250 KISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE----L 325 (576)
T ss_pred EeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH----H
Confidence 99999988644222 12234569999999999887 45667789999999999999999999998554 6
Q ss_pred HHHHHHhhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 232 KTIQRILSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
+...+|.+.....|......++++++|.+||.+||.+|++. -.+-.|||++.+
T Consensus 326 ~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l--------~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 326 ELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITL--------PDIKLHPWVTRD 378 (576)
T ss_pred HHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeeh--------hhheecceeccC
Confidence 77888888888888887789999999999999999999987 555589999854
No 17
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5e-48 Score=335.29 Aligned_cols=253 Identities=29% Similarity=0.480 Sum_probs=225.2
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcch-HHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEecc
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKID-ENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYA 101 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~ 101 (298)
..|...+.||+|+.|.||.|....++..||||++....... +-+.+|+.+++..+|+||+++++.+...+.+++||||+
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 47999999999999999999999999999999998765544 45779999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC-CCCCC
Q 022401 102 SGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-QPKST 180 (298)
Q Consensus 102 ~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~-~~~~~ 180 (298)
+||+|.+.+... .+++.++..+.+.+++||+|||.+||+|+|||.+||+++.+|. +||+|||+|....... .....
T Consensus 353 ~ggsLTDvVt~~-~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~--vKltDFGFcaqi~~~~~KR~Tm 429 (550)
T KOG0578|consen 353 EGGSLTDVVTKT-RMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGS--VKLTDFGFCAQISEEQSKRSTM 429 (550)
T ss_pred CCCchhhhhhcc-cccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCc--EEEeeeeeeeccccccCccccc
Confidence 999999988554 4899999999999999999999999999999999999999998 9999999987555544 66777
Q ss_pred CCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHH
Q 022401 181 VGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISR 260 (298)
Q Consensus 181 ~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 260 (298)
.|+++|||||....+.|..+ .||||||++++||+.|++||-.. ..++++..-..++.+.+..+..++.++++|+.+
T Consensus 430 VGTPYWMAPEVvtrk~YG~K-VDIWSLGIMaIEMveGEPPYlnE---~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~ 505 (550)
T KOG0578|consen 430 VGTPYWMAPEVVTRKPYGPK-VDIWSLGIMAIEMVEGEPPYLNE---NPLRALYLIATNGTPKLKNPEKLSPELKDFLDR 505 (550)
T ss_pred cCCCCccchhhhhhcccCcc-ccchhhhhHHHHHhcCCCCccCC---ChHHHHHHHhhcCCCCcCCccccCHHHHHHHHH
Confidence 89999999999999999888 99999999999999999999863 445555555667788888888899999999999
Q ss_pred hhhhCCCCcccccccchhhhHHHhhhhhhh
Q 022401 261 IFVADPAAVSIFFFPLNMSCLLLFSFVWMF 290 (298)
Q Consensus 261 ~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~ 290 (298)
||+.|+.+|+++ .++|+||||.
T Consensus 506 cL~~dv~~RasA--------~eLL~HpFl~ 527 (550)
T KOG0578|consen 506 CLVVDVEQRASA--------KELLEHPFLK 527 (550)
T ss_pred HhhcchhcCCCH--------HHHhcChhhh
Confidence 999999999988 5555777773
No 18
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=5e-47 Score=326.89 Aligned_cols=263 Identities=31% Similarity=0.489 Sum_probs=223.7
Q ss_pred CCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeE
Q 022401 19 MHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRSLRHPNIVRFKEVILTPTHL 94 (298)
Q Consensus 19 ~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 94 (298)
....++|+++++||+|+||.||+|+.+.+|..||+|++.++. ...+.++.|-.+|....+|.||+++..|.+...+
T Consensus 137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~L 216 (550)
T KOG0605|consen 137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYL 216 (550)
T ss_pred cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCee
Confidence 447789999999999999999999999999999999998753 3335577899999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccC-
Q 022401 95 AIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL- 173 (298)
Q Consensus 95 ~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~- 173 (298)
|+||||.+||++..+|...+.+++..+..++.+++.||+.||+.|++||||||+|+|+|..|+ +||+|||+|.....
T Consensus 217 YLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GH--iKLSDFGLs~gl~~~ 294 (550)
T KOG0605|consen 217 YLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGH--IKLSDFGLSTGLDKK 294 (550)
T ss_pred EEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCC--Eeeccccccchhhhh
Confidence 999999999999999999999999999999999999999999999999999999999999999 99999999841110
Q ss_pred --------------------CCCCC---------------------------CCCCCCcccCccccccccCCCCccchHH
Q 022401 174 --------------------HSQPK---------------------------STVGTPAYIAPEVLLRHEYDGKIADVWS 206 (298)
Q Consensus 174 --------------------~~~~~---------------------------~~~~~~~~~aPE~~~~~~~~~~~~Di~s 206 (298)
..... ...|+|.|+|||++.+.+|... +|.||
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~-cDwWS 373 (550)
T KOG0605|consen 295 HRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKE-CDWWS 373 (550)
T ss_pred hhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCcc-ccHHH
Confidence 00000 0127899999999999998766 99999
Q ss_pred HHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhh
Q 022401 207 CGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSF 286 (298)
Q Consensus 207 lG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~h 286 (298)
|||++|||+.|.+||......+.+.+++..-.. +..|.....+++.++||.+||. ||++|... ....++-.|
T Consensus 374 LG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~--l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~-----~G~~EIK~H 445 (550)
T KOG0605|consen 374 LGCIMYEMLVGYPPFCSETPQETYRKIVNWRET--LKFPEEVDLSDEAKDLITRLLC-DPENRLGS-----KGAEEIKKH 445 (550)
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhh--ccCCCcCcccHHHHHHHHHHhc-CHHHhcCc-----ccHHHHhcC
Confidence 999999999999999997765554444444222 3445555578999999999998 99999973 245788999
Q ss_pred hhhhhh
Q 022401 287 VWMFDA 292 (298)
Q Consensus 287 p~~~~~ 292 (298)
||+.+.
T Consensus 446 PfF~~v 451 (550)
T KOG0605|consen 446 PFFKGV 451 (550)
T ss_pred CccccC
Confidence 999764
No 19
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2.3e-46 Score=319.56 Aligned_cols=263 Identities=23% Similarity=0.304 Sum_probs=217.0
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEe
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVME 99 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~ 99 (298)
.|++.+.||+|+||.||++.+..+++.||+|.+.... .....+.+|+.++++++|++++++.+++.+.+.+++|+|
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 3889999999999999999999999999999987532 222456789999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCC
Q 022401 100 YASGGELFERICNA--GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP 177 (298)
Q Consensus 100 ~~~~~sL~~~l~~~--~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~ 177 (298)
|+++++|...+... ..+++..+..++.|++.||+|||+.|++|+||||+||+++.++. ++|+|||++.........
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~--~kl~Dfg~~~~~~~~~~~ 158 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGH--IRISDLGLAVQIPEGETV 158 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCC--EEEeeCCCcEEcCCCCee
Confidence 99999998877543 35899999999999999999999999999999999999998887 999999998754333333
Q ss_pred CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHH
Q 022401 178 KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDL 257 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (298)
....++..|+|||.+.+..++.+ +||||+|+++|+|++|..||...............+...... ....++.++.+|
T Consensus 159 ~~~~g~~~y~aPE~~~~~~~~~~-~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~~~~~l 235 (285)
T cd05631 159 RGRVGTVGYMAPEVINNEKYTFS-PDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEE--YSEKFSEDAKSI 235 (285)
T ss_pred cCCCCCCCccCHhhhcCCCCCcc-cCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhccccc--CCccCCHHHHHH
Confidence 44568899999999988877766 999999999999999999998766543333333333333222 334478999999
Q ss_pred HHHhhhhCCCCcccccccchhhhHHHhhhhhhhhhhh
Q 022401 258 ISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDATE 294 (298)
Q Consensus 258 i~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~~~ 294 (298)
+++||+.||.+||++.+. ...++++|||+.+...
T Consensus 236 i~~~l~~~P~~R~~~~~~---~~~~~~~h~~~~~~~~ 269 (285)
T cd05631 236 CRMLLTKNPKERLGCRGN---GAAGVKQHPIFKNINF 269 (285)
T ss_pred HHHHhhcCHHHhcCCCCC---CHHHHhcCHhhcCCCH
Confidence 999999999999985443 3578889999987643
No 20
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=4.6e-47 Score=324.76 Aligned_cols=256 Identities=30% Similarity=0.513 Sum_probs=215.7
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEE
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
++|++.+.||+|+||.||++.+..+++.+|+|++.... +..+.+.+|+.++++++||||+++++++.++..+++|+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 47999999999999999999999899999999987532 23456788999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCCC
Q 022401 99 EYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK 178 (298)
Q Consensus 99 ~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~~ 178 (298)
||+++++|.+++.....+++..+..++.|++.||+|||++|++|+||+|+||+++.++. ++|+|||++..... ...
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~--~kl~Dfg~~~~~~~--~~~ 156 (291)
T cd05612 81 EYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGH--IKLTDFGFAKKLRD--RTW 156 (291)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCC--EEEEecCcchhccC--Ccc
Confidence 99999999999988888999999999999999999999999999999999999998887 99999998864432 223
Q ss_pred CCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHH
Q 022401 179 STVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLI 258 (298)
Q Consensus 179 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (298)
...+++.|+|||.+.+..++.+ +||||||+++|+|++|..||..... ......+......++. ..+.++.++|
T Consensus 157 ~~~gt~~y~aPE~~~~~~~~~~-~DiwSlG~il~~l~~g~~pf~~~~~----~~~~~~i~~~~~~~~~--~~~~~~~~li 229 (291)
T cd05612 157 TLCGTPEYLAPEVIQSKGHNKA-VDWWALGILIYEMLVGYPPFFDDNP----FGIYEKILAGKLEFPR--HLDLYAKDLI 229 (291)
T ss_pred cccCChhhcCHHHHcCCCCCch-hhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHhCCcCCCc--cCCHHHHHHH
Confidence 3457899999999887777655 9999999999999999999987554 2334444444444433 3689999999
Q ss_pred HHhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 259 SRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 259 ~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
++||+.||.+||+... ....+++.|||+.+.
T Consensus 230 ~~~l~~dp~~R~~~~~---~~~~~~l~h~~~~~~ 260 (291)
T cd05612 230 KKLLVVDRTRRLGNMK---NGADDVKNHRWFKSV 260 (291)
T ss_pred HHHcCCCHHHccCCcc---CCHHHHhcCccccCC
Confidence 9999999999996321 124677799998753
No 21
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.6e-46 Score=326.81 Aligned_cols=257 Identities=29% Similarity=0.475 Sum_probs=218.7
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEE
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAI 96 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 96 (298)
..++|++.+.||+|+||.||++++..+++.||+|++.... ...+.+.+|+.++++++||||+++++++.+++.+++
T Consensus 16 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 95 (329)
T PTZ00263 16 KLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYF 95 (329)
T ss_pred CchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEE
Confidence 4578999999999999999999999999999999987532 233567889999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCC
Q 022401 97 VMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ 176 (298)
Q Consensus 97 v~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~ 176 (298)
|+||+.+++|.+.+.....+++..+..++.|++.||+|||++|++|+||||+||+++.++. ++|+|||++..... .
T Consensus 96 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~--~kl~Dfg~~~~~~~--~ 171 (329)
T PTZ00263 96 LLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGH--VKVTDFGFAKKVPD--R 171 (329)
T ss_pred EEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCC--EEEeeccCceEcCC--C
Confidence 9999999999999988888999999999999999999999999999999999999998887 99999999864432 2
Q ss_pred CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHH
Q 022401 177 PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRD 256 (298)
Q Consensus 177 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 256 (298)
.....+++.|+|||.+.+..++.+ +|||||||++|+|++|..||..... ......+..+....+ ..++.++.+
T Consensus 172 ~~~~~gt~~y~aPE~~~~~~~~~~-~DiwslG~il~elltg~~pf~~~~~----~~~~~~i~~~~~~~p--~~~~~~~~~ 244 (329)
T PTZ00263 172 TFTLCGTPEYLAPEVIQSKGHGKA-VDWWTMGVLLYEFIAGYPPFFDDTP----FRIYEKILAGRLKFP--NWFDGRARD 244 (329)
T ss_pred cceecCChhhcCHHHHcCCCCCCc-ceeechHHHHHHHHcCCCCCCCCCH----HHHHHHHhcCCcCCC--CCCCHHHHH
Confidence 234468899999999988777655 9999999999999999999976543 333444555544433 347899999
Q ss_pred HHHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 257 LISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 257 li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
||.+||+.||.+|++... ....+++.|||+.+
T Consensus 245 li~~~L~~dP~~R~~~~~---~~~~~ll~hp~f~~ 276 (329)
T PTZ00263 245 LVKGLLQTDHTKRLGTLK---GGVADVKNHPYFHG 276 (329)
T ss_pred HHHHHhhcCHHHcCCCCC---CCHHHHhcCCccCC
Confidence 999999999999997422 23578889999975
No 22
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3e-47 Score=325.90 Aligned_cols=259 Identities=27% Similarity=0.447 Sum_probs=214.8
Q ss_pred CCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcch---HHHHHHHHHHhcCCCCCeeeeeEEEEeC--CeE
Q 022401 20 HDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKID---ENVQREIINHRSLRHPNIVRFKEVILTP--THL 94 (298)
Q Consensus 20 ~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~ 94 (298)
...+.|+.+++||+|.||.||+|++..+|+.||+|.+..+.... .-..+|+.||++|.||||+++.+...+. ..+
T Consensus 114 r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~si 193 (560)
T KOG0600|consen 114 RRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSI 193 (560)
T ss_pred cchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceE
Confidence 34578999999999999999999999999999999998765332 2346899999999999999999998876 699
Q ss_pred EEEEeccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccC
Q 022401 95 AIVMEYASGGELFERICNA-GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 173 (298)
Q Consensus 95 ~lv~~~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~ 173 (298)
|+|||||+. +|.-++... -.+++.+++-+++||+.||+|+|++|++|||||.+|||+|.+|. +||+|||+|+....
T Consensus 194 YlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~--LKiaDFGLAr~y~~ 270 (560)
T KOG0600|consen 194 YLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGV--LKIADFGLARFYTP 270 (560)
T ss_pred EEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCC--EEeccccceeeccC
Confidence 999999977 676676553 37999999999999999999999999999999999999999998 99999999984444
Q ss_pred CC--CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCC-CC-----
Q 022401 174 HS--QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYS-VP----- 245 (298)
Q Consensus 174 ~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~----- 245 (298)
.. ..-....+.+|.|||.+.+...++.+.|+||.||++.||++|...|.+..+.+++..+.+-....... |+
T Consensus 271 ~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP 350 (560)
T KOG0600|consen 271 SGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLP 350 (560)
T ss_pred CCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCC
Confidence 33 33455578899999999998877777999999999999999999999998877766555433222111 11
Q ss_pred C-----------------CCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 246 D-----------------TNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 246 ~-----------------~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
. ....+++..+|+..||..||.+|.|+.++| +|+|+
T Consensus 351 ~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL--------~seyF 403 (560)
T KOG0600|consen 351 HATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSAL--------QSEYF 403 (560)
T ss_pred cccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHh--------cCccc
Confidence 0 014678899999999999999999995554 66676
No 23
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=2.8e-46 Score=296.60 Aligned_cols=258 Identities=26% Similarity=0.413 Sum_probs=217.3
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcc---hHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEe
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKI---DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVME 99 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~ 99 (298)
.+|...++||+|.||+||+|++..+|+.||||.+...... .-...+|+..|+.++|+||+.++++|.+.+.+.+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 5799999999999999999999999999999999876443 4567899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCCC
Q 022401 100 YASGGELFERICNAG-RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK 178 (298)
Q Consensus 100 ~~~~~sL~~~l~~~~-~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~~ 178 (298)
|++ .+|...+.... .++...++.++.++++|++|||++.|+||||||.|++++++|. +|++|||+++.........
T Consensus 82 fm~-tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~--lKiADFGLAr~f~~p~~~~ 158 (318)
T KOG0659|consen 82 FMP-TDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQ--LKIADFGLARFFGSPNRIQ 158 (318)
T ss_pred ecc-ccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCc--EEeecccchhccCCCCccc
Confidence 995 48888886544 6899999999999999999999999999999999999999998 9999999998655444332
Q ss_pred C-CCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCC-CCCC----------
Q 022401 179 S-TVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQY-SVPD---------- 246 (298)
Q Consensus 179 ~-~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~---------- 246 (298)
. ...+.+|.|||.+.+...+....|+||.||++.||+-|.+-|.+.++.+++....+.+..... .+|.
T Consensus 159 ~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~ 238 (318)
T KOG0659|consen 159 THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKI 238 (318)
T ss_pred ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHH
Confidence 2 357888999999999887777799999999999999998888888887777776666533221 1111
Q ss_pred -----------CCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 247 -----------TNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 247 -----------~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
-...+++..+|+..||..||.+|+|+.| ++.|+|+.+
T Consensus 239 ~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~q--------aL~~~yf~~ 286 (318)
T KOG0659|consen 239 QQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQ--------ALKHPYFKS 286 (318)
T ss_pred hcCCCCccccccccccHHHHHHHHhhhccCchhcccHHH--------Hhcchhhhc
Confidence 1134678899999999999999998754 556777764
No 24
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-46 Score=312.39 Aligned_cols=263 Identities=27% Similarity=0.419 Sum_probs=217.6
Q ss_pred CcCCCCCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC--cchHHHHHHHHHHhcCCCCCeeeeeEEEEeC
Q 022401 14 MDMPIMHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD--KIDENVQREIINHRSLRHPNIVRFKEVILTP 91 (298)
Q Consensus 14 ~~~~~~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 91 (298)
....+.+..++|++.++||.|..++||+|+...++..||||++..+. ...+.+.+|+..++.++||||++.+..|..+
T Consensus 17 ~~~~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~ 96 (516)
T KOG0582|consen 17 SEKEFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVD 96 (516)
T ss_pred ccccCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEec
Confidence 34456677899999999999999999999999999999999997653 3346789999999999999999999999999
Q ss_pred CeEEEEEeccCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccc
Q 022401 92 THLAIVMEYASGGELFERICNAG--RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK 169 (298)
Q Consensus 92 ~~~~lv~~~~~~~sL~~~l~~~~--~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~ 169 (298)
+.+++||++|.+||+.+.+...- .+++..+..|++++++||.|||.+|.+|||||+.|||++++|. |+|+|||.+-
T Consensus 97 ~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~--VkLadFgvsa 174 (516)
T KOG0582|consen 97 SELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGT--VKLADFGVSA 174 (516)
T ss_pred ceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCc--EEEcCceeee
Confidence 99999999999999999997543 3899999999999999999999999999999999999999998 9999999764
Q ss_pred cccCCCCC-----CCCCCCCcccCcccccc--ccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCC
Q 022401 170 SSVLHSQP-----KSTVGTPAYIAPEVLLR--HEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQY 242 (298)
Q Consensus 170 ~~~~~~~~-----~~~~~~~~~~aPE~~~~--~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 242 (298)
.....+.. ....+++.|||||.+.. .+|+.+ +||||||++..|+.+|+.||.....- .-++.++.+..+
T Consensus 175 ~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfK-aDIwSfGITA~ELA~G~aPf~k~pPm---kvLl~tLqn~pp 250 (516)
T KOG0582|consen 175 SLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFK-ADIWSFGITACELAHGHAPFSKYPPM---KVLLLTLQNDPP 250 (516)
T ss_pred eecccCceeeEeeccccCcccccChHHhhhcccCccch-hhhhhhhHHHHHHhcCCCCcccCChH---HHHHHHhcCCCC
Confidence 33332222 33468999999999443 356666 99999999999999999999987653 334444444443
Q ss_pred -------CCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhh
Q 022401 243 -------SVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMF 290 (298)
Q Consensus 243 -------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~ 290 (298)
+.......+.+++++|..||.+||.+|||++++| .|+|+.
T Consensus 251 ~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLl--------kh~FFk 297 (516)
T KOG0582|consen 251 TLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLL--------KHAFFK 297 (516)
T ss_pred CcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHh--------ccHHHh
Confidence 1222234567899999999999999999985555 566665
No 25
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=7.1e-46 Score=321.94 Aligned_cols=251 Identities=33% Similarity=0.519 Sum_probs=208.9
Q ss_pred eeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEeccCCC
Q 022401 29 RDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGG 104 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~~~ 104 (298)
+.||+|+||.||++++..+|+.||+|++.... .....+.+|+.++++++||||+++++++...+.+++|+||+.++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999999999999999987532 22345678999999999999999999999999999999999999
Q ss_pred CHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccC-CCCCCCCCCC
Q 022401 105 ELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL-HSQPKSTVGT 183 (298)
Q Consensus 105 sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~-~~~~~~~~~~ 183 (298)
+|.+.+.....+++..+..++.|++.||+|||+.|++||||||+||+++.++. ++|+|||++..... ........++
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~--~kl~DfG~a~~~~~~~~~~~~~~gt 158 (323)
T cd05571 81 ELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGH--IKITDFGLCKEGISDGATMKTFCGT 158 (323)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCC--EEEeeCCCCcccccCCCcccceecC
Confidence 99999988888999999999999999999999999999999999999998887 99999998864322 2222344589
Q ss_pred CcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhhh
Q 022401 184 PAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIFV 263 (298)
Q Consensus 184 ~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 263 (298)
+.|+|||.+.+..++.+ +||||+||++|+|++|..||...+. ......+.......+ ..+++++.++|++||+
T Consensus 159 ~~y~aPE~~~~~~~~~~-~DiwSlG~il~elltg~~Pf~~~~~----~~~~~~~~~~~~~~p--~~~~~~~~~li~~~L~ 231 (323)
T cd05571 159 PEYLAPEVLEDNDYGRA-VDWWGLGVVMYEMMCGRLPFYNQDH----EKLFELILMEEIRFP--RTLSPEAKSLLAGLLK 231 (323)
T ss_pred ccccChhhhcCCCCCcc-ccCcccchhhhhhhcCCCCCCCCCH----HHHHHHHHcCCCCCC--CCCCHHHHHHHHHHcc
Confidence 99999999988777665 9999999999999999999987543 233334444444333 4489999999999999
Q ss_pred hCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 264 ADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 264 ~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
.||++||+... ....++++|||+.+
T Consensus 232 ~dP~~R~~~~~---~~~~~ll~h~~f~~ 256 (323)
T cd05571 232 KDPKQRLGGGP---EDAKEIMEHRFFAS 256 (323)
T ss_pred CCHHHcCCCCC---CCHHHHHcCCCcCC
Confidence 99999994322 12466778888865
No 26
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=3e-45 Score=315.34 Aligned_cols=261 Identities=26% Similarity=0.397 Sum_probs=205.3
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC--cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEe
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD--KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVME 99 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~ 99 (298)
.++|++.+.||+|+||.||++++..+++.+|+|++.... .....+.+|+.+++.++||||+++++++.++...++|+|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 468999999999999999999999899999999987543 223456789999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC-CCC
Q 022401 100 YASGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH-SQP 177 (298)
Q Consensus 100 ~~~~~sL~~~l~~-~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~-~~~ 177 (298)
|+. ++|.+.+.. ...+++..+..++.|++.||+|||+.|++|+||||+||+++.++. ++|+|||++...... ...
T Consensus 84 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~--~kl~Dfg~~~~~~~~~~~~ 160 (303)
T cd07869 84 YVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGE--LKLADFGLARAKSVPSHTY 160 (303)
T ss_pred CCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCC--EEECCCCcceeccCCCccC
Confidence 996 467766654 356899999999999999999999999999999999999998887 999999988643222 222
Q ss_pred CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCC---------------
Q 022401 178 KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQY--------------- 242 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~--------------- 242 (298)
....+++.|+|||++.+......++||||+||++|+|++|..||....+.....+..........
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (303)
T cd07869 161 SNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKP 240 (303)
T ss_pred CCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcccccc
Confidence 34557889999999876554455599999999999999999999876543222222211111100
Q ss_pred ---CCC---------CCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhhh
Q 022401 243 ---SVP---------DTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDAT 293 (298)
Q Consensus 243 ---~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~~ 293 (298)
... .....++++.+|+.+||+.||.+|||+ .++++|||+.+.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~--------~~~l~h~~f~~~~ 295 (303)
T cd07869 241 ERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSA--------QAALSHEYFSDLP 295 (303)
T ss_pred ccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCH--------HHHhcCcccccCC
Confidence 000 001245789999999999999999987 5666899998643
No 27
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-48 Score=304.00 Aligned_cols=257 Identities=34% Similarity=0.590 Sum_probs=221.8
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeec---CCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEE
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIER---GDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
.+.|++.++||+|.|++|+.+.+..+|+.+++|++.. ....-+.+.+|+.|.+.|+||||+++++.+......|+||
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 3689999999999999999999999999999998864 3445577889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeC-CCCCCEEEeecCccccccCCCCC
Q 022401 99 EYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDG-SPAPRLKICDFGYSKSSVLHSQP 177 (298)
Q Consensus 99 ~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~-~~~~~~~l~d~~~~~~~~~~~~~ 177 (298)
|++.|+.|...+-...-+++..+...++||+.+++|.|.+||+|||+||+|+++.+ +..+.+||+|||++.........
T Consensus 90 e~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~ 169 (355)
T KOG0033|consen 90 DLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAW 169 (355)
T ss_pred ecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCcccc
Confidence 99999999877766667888999999999999999999999999999999999953 33345999999999866644444
Q ss_pred CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCC--CCCCCCHHHH
Q 022401 178 KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVP--DTNPISQECR 255 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~ 255 (298)
....|+|.|+|||++...++..+ +|||+-|+++|-++.|.+||.+.+. ..+.+++..+.++.+ ..+.++++.+
T Consensus 170 ~G~~GtP~fmaPEvvrkdpy~kp-vDiW~cGViLfiLL~G~~PF~~~~~----~rlye~I~~g~yd~~~~~w~~is~~Ak 244 (355)
T KOG0033|consen 170 HGFAGTPGYLSPEVLKKDPYSKP-VDIWACGVILYILLVGYPPFWDEDQ----HRLYEQIKAGAYDYPSPEWDTVTPEAK 244 (355)
T ss_pred ccccCCCcccCHHHhhcCCCCCc-chhhhhhHHHHHHHhCCCCCCCccH----HHHHHHHhccccCCCCcccCcCCHHHH
Confidence 55679999999999988888777 9999999999999999999998665 455666666666543 4566899999
Q ss_pred HHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 256 DLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 256 ~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
+||++||..||.+|+|+.|+| +|||+.+
T Consensus 245 ~LvrrML~~dP~kRIta~EAL--------~HpWi~~ 272 (355)
T KOG0033|consen 245 SLIRRMLTVNPKKRITADEAL--------KHPWICN 272 (355)
T ss_pred HHHHHHhccChhhhccHHHHh--------CCchhcc
Confidence 999999999999999985555 7888875
No 28
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=4.2e-45 Score=312.19 Aligned_cols=258 Identities=26% Similarity=0.429 Sum_probs=205.9
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC--cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEE
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD--KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
..++|++.+.||.|+||.||++++..++..||+|.+.... .....+.+|+.++++++||||+++++++..+...++|+
T Consensus 3 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 82 (288)
T cd07871 3 KLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVF 82 (288)
T ss_pred ccccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEE
Confidence 4578999999999999999999999999999999986542 23356778999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC-C
Q 022401 99 EYASGGELFERICNAG-RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-Q 176 (298)
Q Consensus 99 ~~~~~~sL~~~l~~~~-~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~-~ 176 (298)
|++++ +|.+.+.... .++...+..++.|++.||+|||++|++|+||||+||+++.++. ++|+|||++....... .
T Consensus 83 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~--~kl~DfG~~~~~~~~~~~ 159 (288)
T cd07871 83 EYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGE--LKLADFGLARAKSVPTKT 159 (288)
T ss_pred eCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCC--EEECcCcceeeccCCCcc
Confidence 99975 8888876544 5789999999999999999999999999999999999998887 9999999886433222 2
Q ss_pred CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcC---------------
Q 022401 177 PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQ--------------- 241 (298)
Q Consensus 177 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~--------------- 241 (298)
.....+++.|+|||.+.+......++||||+|+++|+|++|..||...+..+.+....+......
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (288)
T cd07871 160 YSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRS 239 (288)
T ss_pred ccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhc
Confidence 23345788999999987654444559999999999999999999987655443332222111000
Q ss_pred CCCC---------CCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 242 YSVP---------DTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 242 ~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
...+ ....+++++.+||++||+.||.+|||+ .++++|||+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~--------~~~l~hp~f 288 (288)
T cd07871 240 YLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISA--------EAALRHSYF 288 (288)
T ss_pred cccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCH--------HHHhcCCCC
Confidence 0000 112367899999999999999999987 555578885
No 29
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=2.9e-45 Score=319.82 Aligned_cols=262 Identities=28% Similarity=0.437 Sum_probs=217.5
Q ss_pred CCCCCCCCCeeEEeeeccCCeEEEEEEEEccCC-cEEEEEEeecC----CcchHHHHHHHHHHhcCCCCCeeeeeEEEEe
Q 022401 16 MPIMHDSDRYDFVRDIGSGNFGVARLMRDKVTK-ELVAVKYIERG----DKIDENVQREIINHRSLRHPNIVRFKEVILT 90 (298)
Q Consensus 16 ~~~~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~-~~~aiK~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 90 (298)
.......++|++.+.||.|+||.||+|.+..++ ..+|+|.+... ....+.+.+|+.+++.++||||+++++++.+
T Consensus 23 ~~~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~ 102 (340)
T PTZ00426 23 RKNKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKD 102 (340)
T ss_pred cCCCCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEe
Confidence 345567789999999999999999999876554 68999998653 2334567789999999999999999999999
Q ss_pred CCeEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCcccc
Q 022401 91 PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKS 170 (298)
Q Consensus 91 ~~~~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~ 170 (298)
+..+++|+||+.+++|.+++.....+++..+..++.|++.||.|||+.|++||||||+||+++.++. ++|+|||++..
T Consensus 103 ~~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~--ikL~DFG~a~~ 180 (340)
T PTZ00426 103 ESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGF--IKMTDFGFAKV 180 (340)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCC--EEEecCCCCee
Confidence 9999999999999999999988888999999999999999999999999999999999999998887 99999999864
Q ss_pred ccCCCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCC
Q 022401 171 SVLHSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPI 250 (298)
Q Consensus 171 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (298)
... ......+++.|+|||++.+..++.+ +||||+||++|+|++|..||...+. ....+.+.......+ ..+
T Consensus 181 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwSlGvil~ell~G~~Pf~~~~~----~~~~~~i~~~~~~~p--~~~ 251 (340)
T PTZ00426 181 VDT--RTYTLCGTPEYIAPEILLNVGHGKA-ADWWTLGIFIYEILVGCPPFYANEP----LLIYQKILEGIIYFP--KFL 251 (340)
T ss_pred cCC--CcceecCChhhcCHHHHhCCCCCcc-ccccchhhHHHHHhcCCCCCCCCCH----HHHHHHHhcCCCCCC--CCC
Confidence 332 2234568899999999987777655 9999999999999999999987554 233444444444433 347
Q ss_pred CHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 251 SQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 251 ~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
++++.+++++||+.||.+|++... -...++++|||+.+
T Consensus 252 ~~~~~~li~~~l~~dp~~R~~~~~---~~~~~~~~hp~f~~ 289 (340)
T PTZ00426 252 DNNCKHLMKKLLSHDLTKRYGNLK---KGAQNVKEHPWFGN 289 (340)
T ss_pred CHHHHHHHHHHcccCHHHcCCCCC---CCHHHHHcCCCcCC
Confidence 899999999999999999974211 13467779999875
No 30
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.1e-44 Score=315.53 Aligned_cols=259 Identities=25% Similarity=0.446 Sum_probs=211.0
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC--cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEE
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD--KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
..++|++.+.||+|+||.||++++..++..+|+|.+.... .....+.+|+.++++++||||+++++++..++.+++|+
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (331)
T cd06649 3 KDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (331)
T ss_pred CcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEe
Confidence 3578999999999999999999999999999999987642 23456889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhc-CcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCC
Q 022401 99 EYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM-QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP 177 (298)
Q Consensus 99 ~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~-~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~ 177 (298)
||+++++|.+++.....+++..+..++.+++.|+.|||+. +++|+||||+||+++.++. ++|+|||++...... ..
T Consensus 83 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~-~~ 159 (331)
T cd06649 83 EHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGE--IKLCDFGVSGQLIDS-MA 159 (331)
T ss_pred ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCc--EEEccCccccccccc-cc
Confidence 9999999999998888899999999999999999999986 6999999999999998887 999999988644322 22
Q ss_pred CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHH------------------------
Q 022401 178 KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKT------------------------ 233 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~------------------------ 233 (298)
....++..|+|||.+.+..++.+ +||||||+++|+|++|..||...+..+ +...
T Consensus 160 ~~~~g~~~y~aPE~~~~~~~~~~-~DiwslG~il~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (331)
T cd06649 160 NSFVGTRSYMSPERLQGTHYSVQ-SDIWSMGLSLVELAIGRYPIPPPDAKE-LEAIFGRPVVDGEEGEPHSISPRPRPPG 237 (331)
T ss_pred ccCCCCcCcCCHhHhcCCCCCch-HhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHhcccccccccCCccccCccccccc
Confidence 34467889999999987777665 999999999999999999997644311 1111
Q ss_pred -------------------HHHHhhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 234 -------------------IQRILSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 234 -------------------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
...+............+++++.+||.+||+.||++|||+. ++++|||+...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~--------ell~h~~~~~~ 307 (331)
T cd06649 238 RPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLK--------MLMNHTFIKRS 307 (331)
T ss_pred ccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHH--------HHhcChHHhhc
Confidence 1111111111111223688999999999999999999884 55578887654
No 31
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-45 Score=319.00 Aligned_cols=262 Identities=36% Similarity=0.578 Sum_probs=227.3
Q ss_pred CCCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc----chHHHHHHHHHHhcCC-CCCeeeeeEEEEeCC
Q 022401 18 IMHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK----IDENVQREIINHRSLR-HPNIVRFKEVILTPT 92 (298)
Q Consensus 18 ~~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~----~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~ 92 (298)
.......|++.+.||.|.||.||.++.+.+|+.+|+|++.+... ..+.+.+|+.+++++. ||||+.+.+.+++..
T Consensus 30 ~~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~ 109 (382)
T KOG0032|consen 30 SEDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPD 109 (382)
T ss_pred cccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCC
Confidence 34456789999999999999999999999999999999976533 3467899999999998 999999999999999
Q ss_pred eEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCC--CCCEEEeecCcccc
Q 022401 93 HLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSP--APRLKICDFGYSKS 170 (298)
Q Consensus 93 ~~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~--~~~~~l~d~~~~~~ 170 (298)
.+++|+|++.||.|.+.+... .+++.....++.|++.+++|||+.|++|+||||+|+++.... .+.++++|||++..
T Consensus 110 ~~~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~ 188 (382)
T KOG0032|consen 110 SVYLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKF 188 (382)
T ss_pred eEEEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceE
Confidence 999999999999999998776 499999999999999999999999999999999999996543 24699999999987
Q ss_pred ccCCCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCC--CCCCCC
Q 022401 171 SVLHSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQY--SVPDTN 248 (298)
Q Consensus 171 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 248 (298)
...........|++.|+|||.+...++... +|+||+|+++|.|++|..||....+...+. .+..+.+ ..+...
T Consensus 189 ~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~-~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~----~i~~~~~~f~~~~w~ 263 (382)
T KOG0032|consen 189 IKPGERLHTIVGTPEYVAPEVLGGRPYGDE-VDVWSIGVILYILLSGVPPFWGETEFEIFL----AILRGDFDFTSEPWD 263 (382)
T ss_pred ccCCceEeeecCCccccCchhhcCCCCCcc-cchhHHHHHHHHHhhCCCCCcCCChhHHHH----HHHcCCCCCCCCCcc
Confidence 776556677789999999999987788776 999999999999999999999987655444 4444444 444555
Q ss_pred CCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhhh
Q 022401 249 PISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDAT 293 (298)
Q Consensus 249 ~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~~ 293 (298)
.++..+.+||+.|+..||..|+|+ .++++|||++++.
T Consensus 264 ~is~~akd~i~~ll~~dp~~R~ta--------~~~L~HpWi~~~~ 300 (382)
T KOG0032|consen 264 DISESAKDFIRKLLEFDPRKRLTA--------AQALQHPWIKSIG 300 (382)
T ss_pred ccCHHHHHHHHHhcccCcccCCCH--------HHHhcCccccCCc
Confidence 689999999999999999999987 5555799998753
No 32
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-46 Score=320.60 Aligned_cols=251 Identities=27% Similarity=0.414 Sum_probs=216.6
Q ss_pred cCCCCCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeE
Q 022401 15 DMPIMHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHL 94 (298)
Q Consensus 15 ~~~~~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 94 (298)
.-++....+.+++++.||+|-||.||.+.+..+ ..+|+|.+....-..+.|.+|++++++|+|++|++++++|..++.+
T Consensus 198 ~d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~-~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~pi 276 (468)
T KOG0197|consen 198 RDPWEIPREELKLIRELGSGQFGEVWLGKWNGS-TKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPI 276 (468)
T ss_pred cCCeeecHHHHHHHHHhcCCccceEEEEEEcCC-CcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCCce
Confidence 344455556778899999999999999999854 3699999998877778999999999999999999999999998899
Q ss_pred EEEEeccCCCCHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCcccccc
Q 022401 95 AIVMEYASGGELFERICN--AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 172 (298)
Q Consensus 95 ~lv~~~~~~~sL~~~l~~--~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~ 172 (298)
|+|+||+..|+|.++|.. +..++..+.+.++.|||.|++||+++++|||||...||||+.+.. +||+|||+++...
T Consensus 277 yIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~--vKIsDFGLAr~~~ 354 (468)
T KOG0197|consen 277 YIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLV--VKISDFGLARLIG 354 (468)
T ss_pred EEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCce--EEEcccccccccC
Confidence 999999999999999976 557999999999999999999999999999999999999998887 9999999998322
Q ss_pred C--CCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCC
Q 022401 173 L--HSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNP 249 (298)
Q Consensus 173 ~--~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (298)
. +...........|+|||.+..+.++.+ |||||||++|+|++| |+.||.+-... +.+ +......+.+.+..
T Consensus 355 d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~k-SDVWSFGVlL~E~fT~G~~py~~msn~----ev~-~~le~GyRlp~P~~ 428 (468)
T KOG0197|consen 355 DDEYTASEGGKFPIKWTAPEALNYGKFSSK-SDVWSFGVLLWELFTYGRVPYPGMSNE----EVL-ELLERGYRLPRPEG 428 (468)
T ss_pred CCceeecCCCCCCceecCHHHHhhCCcccc-cceeehhhhHHHHhccCCCCCCCCCHH----HHH-HHHhccCcCCCCCC
Confidence 1 222233345678999999999999888 999999999999999 78888876643 333 33456678888999
Q ss_pred CCHHHHHHHHHhhhhCCCCcccccc
Q 022401 250 ISQECRDLISRIFVADPAAVSIFFF 274 (298)
Q Consensus 250 ~~~~l~~li~~~l~~dp~~Rps~~~ 274 (298)
+|+++.+++..||..+|++|||+..
T Consensus 429 CP~~vY~lM~~CW~~~P~~RPtF~~ 453 (468)
T KOG0197|consen 429 CPDEVYELMKSCWHEDPEDRPTFET 453 (468)
T ss_pred CCHHHHHHHHHHhhCCcccCCCHHH
Confidence 9999999999999999999999963
No 33
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.2e-45 Score=324.14 Aligned_cols=254 Identities=34% Similarity=0.536 Sum_probs=215.3
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEE
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
++|++.+.||+|+||.||++++..+++.||+|++.... .....+.+|+.++..++||||+++++++.+++.+++|+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 47999999999999999999999899999999987532 33456788999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC---
Q 022401 99 EYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS--- 175 (298)
Q Consensus 99 ~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~--- 175 (298)
||+.+++|.+++.....+++..++.++.|++.||+|||+.|++|+||||+||+++.++. ++|+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~--~kL~Dfg~~~~~~~~~~~~ 158 (350)
T cd05573 81 EYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGH--IKLADFGLCKKMNKAKDRE 158 (350)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCC--EEeecCCCCccCcccCccc
Confidence 99999999999988888999999999999999999999999999999999999998887 9999999986443322
Q ss_pred ---------------------------CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCch
Q 022401 176 ---------------------------QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPK 228 (298)
Q Consensus 176 ---------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~ 228 (298)
......+++.|+|||.+.+..++.+ +|||||||++|+|++|..||......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwSlG~il~ell~g~~Pf~~~~~~- 236 (350)
T cd05573 159 YYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLE-CDWWSLGVILYEMLYGFPPFYSDTLQ- 236 (350)
T ss_pred ccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCc-eeeEecchhhhhhccCCCCCCCCCHH-
Confidence 2233457889999999988877666 99999999999999999999886642
Q ss_pred hHHHHHHHHhh--cCCCCCCCCCCCHHHHHHHHHhhhhCCCCccc-ccccchhhhHHHhhhhhhhhh
Q 022401 229 DFRKTIQRILS--VQYSVPDTNPISQECRDLISRIFVADPAAVSI-FFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 229 ~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps-~~~~l~~~~~~~~~hp~~~~~ 292 (298)
....++.. .....+....+++++.++|.+||. ||.+||+ + .++++|||+.+.
T Consensus 237 ---~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~--------~~ll~hp~~~~~ 291 (350)
T cd05573 237 ---ETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSF--------EEIKSHPFFKGI 291 (350)
T ss_pred ---HHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCH--------HHHhcCCCcCCC
Confidence 23333433 333444444579999999999997 9999998 6 566678888654
No 34
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=4e-45 Score=318.57 Aligned_cols=254 Identities=29% Similarity=0.441 Sum_probs=211.3
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEE
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
++|++.+.||+|+||.||+|++..+++.||+|++.... .....+.+|+.++..++||||+++++++.+....|+|+
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 47999999999999999999999899999999987542 23345778999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCCC
Q 022401 99 EYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK 178 (298)
Q Consensus 99 ~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~~ 178 (298)
||+++++|.+++.....+++..+..++.|++.||.|||+.|++|+||+|+||+++.++. ++|+|||++..... ...
T Consensus 81 e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~--~kL~Dfg~a~~~~~--~~~ 156 (333)
T cd05600 81 EYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGH--IKLTDFGLSKGIVT--YAN 156 (333)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCC--EEEEeCcCCccccc--ccC
Confidence 99999999999988888999999999999999999999999999999999999998887 99999998864433 234
Q ss_pred CCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCC----CCCCCHHH
Q 022401 179 STVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPD----TNPISQEC 254 (298)
Q Consensus 179 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l 254 (298)
...+++.|+|||.+.+..++.+ +|||||||++|+|++|..||...+..+........ .. ....+. ...+++++
T Consensus 157 ~~~gt~~y~aPE~~~~~~~~~~-~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~-~~-~~~~~~~~~~~~~~s~~~ 233 (333)
T cd05600 157 SVVGSPDYMAPEVLRGKGYDFT-VDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYW-KE-TLQRPVYDDPRFNLSDEA 233 (333)
T ss_pred CcccCccccChhHhcCCCCCCc-cceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhc-cc-cccCCCCCccccccCHHH
Confidence 4568899999999988877665 99999999999999999999876543332222211 10 111111 12468999
Q ss_pred HHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 255 RDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 255 ~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
.++|.+||+.+|.+||++ .+++.|||+.+
T Consensus 234 ~~li~~~l~~~~~rr~s~--------~~ll~h~~~~~ 262 (333)
T cd05600 234 WDLITKLINDPSRRFGSL--------EDIKNHPFFKE 262 (333)
T ss_pred HHHHHHHhhChhhhcCCH--------HHHHhCcccCC
Confidence 999999999999999987 55567777764
No 35
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=4.7e-45 Score=311.64 Aligned_cols=256 Identities=27% Similarity=0.413 Sum_probs=205.7
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC---cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEe
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD---KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVME 99 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~ 99 (298)
++|++.+.||+|+||.||+++++.+++.+|+|++.... ...+.+.+|+.++++++||||+++++++..+..+++|+|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 47999999999999999999999999999999987542 234567889999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC--CC
Q 022401 100 YASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS--QP 177 (298)
Q Consensus 100 ~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~--~~ 177 (298)
|+.++++.........+++..++.++.|++.||.|||+.|++|+||+|+||+++.++. ++|+|||++....... ..
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~--~kl~Dfg~~~~~~~~~~~~~ 158 (287)
T cd07848 81 YVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDV--LKLCDFGFARNLSEGSNANY 158 (287)
T ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCc--EEEeeccCcccccccccccc
Confidence 9998777665555567899999999999999999999999999999999999998887 9999999987543222 12
Q ss_pred CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhh----------cC-----C
Q 022401 178 KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILS----------VQ-----Y 242 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~----------~~-----~ 242 (298)
....+++.|+|||.+.+..++.+ +|+||+|+++|+|++|..||...+..+........... .. .
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~-~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (287)
T cd07848 159 TEYVATRWYRSPELLLGAPYGKA-VDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGL 237 (287)
T ss_pred cccccccccCCcHHHcCCCCCCc-hhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhccc
Confidence 23457889999999987777655 99999999999999999999876543332221111000 00 0
Q ss_pred CCCC-----------CCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 243 SVPD-----------TNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 243 ~~~~-----------~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
..+. ...++.++.+|+.+||+.||++|||+ .++++|||+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~--------~~~l~hp~f 287 (287)
T cd07848 238 RFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLT--------EQCLNHPAF 287 (287)
T ss_pred ccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCH--------HHHhcCCCC
Confidence 0110 11267889999999999999999987 455578885
No 36
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=3.7e-45 Score=315.97 Aligned_cols=248 Identities=31% Similarity=0.514 Sum_probs=208.9
Q ss_pred eccCCeEEEEEEEEccCCcEEEEEEeecC----CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEeccCCCCH
Q 022401 31 IGSGNFGVARLMRDKVTKELVAVKYIERG----DKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 106 (298)
Q Consensus 31 lg~g~~~~vy~~~~~~~~~~~aiK~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~~~sL 106 (298)
||+|+||.||++++..+++.||+|++... ......+.+|+.++++++||||+++++++..+...++|+||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 69999999999999989999999998753 22335567899999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC-CCCCCCCCCCc
Q 022401 107 FERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH-SQPKSTVGTPA 185 (298)
Q Consensus 107 ~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~-~~~~~~~~~~~ 185 (298)
.+.+.....+++..+..++.|++.||.|||++|++||||||+||+++.++. ++|+|||++...... .......+++.
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~--~kl~Dfg~~~~~~~~~~~~~~~~gt~~ 158 (312)
T cd05585 81 FHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGH--IALCDFGLCKLNMKDDDKTNTFCGTPE 158 (312)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCc--EEEEECcccccCccCCCccccccCCcc
Confidence 999988888999999999999999999999999999999999999998887 999999988643222 22233458899
Q ss_pred ccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhhhhC
Q 022401 186 YIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIFVAD 265 (298)
Q Consensus 186 ~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d 265 (298)
|+|||.+.+..++.+ +||||+|+++|+|++|..||...+. .+....+.......+ ..+++++.++|.+||+.|
T Consensus 159 y~aPE~~~~~~~~~~-~DvwslGvil~el~tg~~pf~~~~~----~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~d 231 (312)
T cd05585 159 YLAPELLLGHGYTKA-VDWWTLGVLLYEMLTGLPPFYDENV----NEMYRKILQEPLRFP--DGFDRDAKDLLIGLLSRD 231 (312)
T ss_pred cCCHHHHcCCCCCCc-cceechhHHHHHHHhCCCCcCCCCH----HHHHHHHHcCCCCCC--CcCCHHHHHHHHHHcCCC
Confidence 999999988777665 9999999999999999999987543 334444555444443 347899999999999999
Q ss_pred CCCcccccccchhhhHHHhhhhhhhhh
Q 022401 266 PAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 266 p~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
|.+||++.. ..++++|||+...
T Consensus 232 p~~R~~~~~-----~~e~l~hp~~~~~ 253 (312)
T cd05585 232 PTRRLGYNG-----AQEIKNHPFFSQL 253 (312)
T ss_pred HHHcCCCCC-----HHHHHcCCCcCCC
Confidence 999997532 4678899998753
No 37
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=5.8e-45 Score=317.46 Aligned_cols=262 Identities=27% Similarity=0.452 Sum_probs=214.3
Q ss_pred CeeEEeeeccCCeEEEEEEEEc---cCCcEEEEEEeecC-----CcchHHHHHHHHHHhcC-CCCCeeeeeEEEEeCCeE
Q 022401 24 RYDFVRDIGSGNFGVARLMRDK---VTKELVAVKYIERG-----DKIDENVQREIINHRSL-RHPNIVRFKEVILTPTHL 94 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~---~~~~~~aiK~~~~~-----~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 94 (298)
+|++++.||+|+||.||++++. .+++.||+|++.+. ....+.+.+|+.+++.+ +|++|+++++++..++.+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 5899999999999999998874 46889999998753 22234577899999999 589999999999999999
Q ss_pred EEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC
Q 022401 95 AIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH 174 (298)
Q Consensus 95 ~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~ 174 (298)
++|+||+.+++|.+.+.....+++..+..++.|++.||+|||+.|++||||||+||+++.++. ++|+|||++......
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~--~kl~DfG~~~~~~~~ 158 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGH--VVLTDFGLSKEFLSE 158 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCC--EEEeeCcCCcccccc
Confidence 999999999999999988888999999999999999999999999999999999999998887 999999998643222
Q ss_pred CC--CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCH
Q 022401 175 SQ--PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQ 252 (298)
Q Consensus 175 ~~--~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (298)
.. .....+++.|+|||.+.+......++||||||+++|+|++|..||...............+....... +..++.
T Consensus 159 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 236 (332)
T cd05614 159 EKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPF--PSFIGP 236 (332)
T ss_pred CCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCCC--CCCCCH
Confidence 21 22345889999999987665445559999999999999999999976554444444444554444433 334799
Q ss_pred HHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 253 ECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 253 ~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
++.+++.+||+.||.+||++... ...++++|||+.+.
T Consensus 237 ~~~~li~~~l~~dp~~R~~~~~~---~~~~~l~h~~~~~~ 273 (332)
T cd05614 237 EAQDLLHKLLRKDPKKRLGAGPQ---GASEIKEHPFFKGL 273 (332)
T ss_pred HHHHHHHHHcCCCHHHcCCCCCC---CHHHHHcCCCcCCC
Confidence 99999999999999999966432 24678899998753
No 38
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-45 Score=323.23 Aligned_cols=263 Identities=31% Similarity=0.468 Sum_probs=228.9
Q ss_pred CCCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhcC-CCCCeeeeeEEEEeCC
Q 022401 18 IMHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRSL-RHPNIVRFKEVILTPT 92 (298)
Q Consensus 18 ~~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~ 92 (298)
.....++|.++++||.|.||.|+++..+.+++.||||+++++. ...+....|..++... +||.++.++.+|..++
T Consensus 363 ~~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~ 442 (694)
T KOG0694|consen 363 GPLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE 442 (694)
T ss_pred CcccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCC
Confidence 4678899999999999999999999999999999999998753 3345666777777766 6999999999999999
Q ss_pred eEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCcccccc
Q 022401 93 HLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 172 (298)
Q Consensus 93 ~~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~ 172 (298)
++|+||||..||++ ..+...+.+++..+..++..|+.||+|||++||+|||||.+|||+|.+|+ +||+|||+|...-
T Consensus 443 ~l~fvmey~~Ggdm-~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh--~kiADFGlcKe~m 519 (694)
T KOG0694|consen 443 HLFFVMEYVAGGDL-MHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGH--VKIADFGLCKEGM 519 (694)
T ss_pred eEEEEEEecCCCcE-EEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCc--EEecccccccccC
Confidence 99999999999983 34446678999999999999999999999999999999999999999999 9999999998554
Q ss_pred -CCCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCC
Q 022401 173 -LHSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPIS 251 (298)
Q Consensus 173 -~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (298)
......+..|||.|+|||++.+..|+.. .|-|+||++||||+.|+.||.+.++++ ....|.+..+.+|.. ++
T Consensus 520 ~~g~~TsTfCGTpey~aPEil~e~~Yt~a-VDWW~lGVLlyeML~Gq~PF~gddEee----~FdsI~~d~~~yP~~--ls 592 (694)
T KOG0694|consen 520 GQGDRTSTFCGTPEFLAPEVLTEQSYTRA-VDWWGLGVLLYEMLVGESPFPGDDEEE----VFDSIVNDEVRYPRF--LS 592 (694)
T ss_pred CCCCccccccCChhhcChhhhccCcccch-hhHHHHHHHHHHHHcCCCCCCCCCHHH----HHHHHhcCCCCCCCc--cc
Confidence 4556678889999999999999999776 999999999999999999999987744 445566666666555 89
Q ss_pred HHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhhh
Q 022401 252 QECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDAT 293 (298)
Q Consensus 252 ~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~~ 293 (298)
.+..++++++|..||++|..+- +.....+-.|||+.+++
T Consensus 593 ~ea~~il~~ll~k~p~kRLG~~---e~d~~~i~~hpFFr~i~ 631 (694)
T KOG0694|consen 593 KEAIAIMRRLLRKNPEKRLGSG---ERDAEDIKKHPFFRSID 631 (694)
T ss_pred HHHHHHHHHHhccCcccccCCC---CCCchhhhhCCccccCC
Confidence 9999999999999999999874 44467778999998764
No 39
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.6e-46 Score=290.04 Aligned_cols=256 Identities=34% Similarity=0.583 Sum_probs=227.9
Q ss_pred CCCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCe
Q 022401 18 IMHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRSLRHPNIVRFKEVILTPTH 93 (298)
Q Consensus 18 ~~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 93 (298)
..-..++|++++.||.|.||.||.|+.+.++..+|+|+..++. ....++.+|+++...|+||||++++++|-++..
T Consensus 17 ~~~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~r 96 (281)
T KOG0580|consen 17 KTWTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKR 96 (281)
T ss_pred cccchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccce
Confidence 4556789999999999999999999999999999999988753 344678899999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccc
Q 022401 94 LAIVMEYASGGELFERIC--NAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSS 171 (298)
Q Consensus 94 ~~lv~~~~~~~sL~~~l~--~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~ 171 (298)
.|+++||...+++...+. ...++++...+.++.|++.|+.|+|..+++||||||+|+|++..+. +|++|||-+...
T Consensus 97 iyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~--lkiAdfGwsV~~ 174 (281)
T KOG0580|consen 97 IYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGE--LKIADFGWSVHA 174 (281)
T ss_pred eEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCC--eeccCCCceeec
Confidence 999999999999999998 5567999999999999999999999999999999999999999888 999999987655
Q ss_pred cCCCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCC
Q 022401 172 VLHSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPIS 251 (298)
Q Consensus 172 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (298)
+ .+...+.+|+..|.+||+..+...+.+ .|+|++|++.||++.|..||..... .+..+++.......| ..++
T Consensus 175 p-~~kR~tlcgt~dyl~pEmv~~~~hd~~-Vd~w~lgvl~yeflvg~ppFes~~~----~etYkrI~k~~~~~p--~~is 246 (281)
T KOG0580|consen 175 P-SNKRKTLCGTLDYLPPEMVEGRGHDKF-VDLWSLGVLCYEFLVGLPPFESQSH----SETYKRIRKVDLKFP--STIS 246 (281)
T ss_pred C-CCCceeeecccccCCHhhcCCCCccch-hhHHHHHHHHHHHHhcCCchhhhhh----HHHHHHHHHccccCC--cccC
Confidence 5 566677889999999999999998887 9999999999999999999988663 556666666666655 5589
Q ss_pred HHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 252 QECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 252 ~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
.+..++|++|+.++|.+|.+. -++..|||+.-
T Consensus 247 ~~a~dlI~~ll~~~p~~r~~l--------~~v~~hpwI~a 278 (281)
T KOG0580|consen 247 GGAADLISRLLVKNPIERLAL--------TEVMDHPWIVA 278 (281)
T ss_pred hhHHHHHHHHhccCccccccH--------HHHhhhHHHHh
Confidence 999999999999999999965 66778999864
No 40
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=7e-45 Score=315.68 Aligned_cols=251 Identities=31% Similarity=0.521 Sum_probs=207.5
Q ss_pred eeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEeccCCC
Q 022401 29 RDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGG 104 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~~~ 104 (298)
+.||+|+||.||++++..+|+.||+|++.... .....+.+|+.++++++||||+++++++..+..+|+|+||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46999999999999999999999999987532 23345678999999999999999999999999999999999999
Q ss_pred CHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC-CCCCCCCCC
Q 022401 105 ELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH-SQPKSTVGT 183 (298)
Q Consensus 105 sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~-~~~~~~~~~ 183 (298)
+|...+.....+++..++.++.|++.||+|||++|++|+||||+||+++.++. ++|+|||++...... .......++
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~--~kL~Dfg~~~~~~~~~~~~~~~~gt 158 (323)
T cd05595 81 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH--IKITDFGLCKEGISDGATMKTFCGT 158 (323)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCC--EEecccHHhccccCCCCccccccCC
Confidence 99999988888999999999999999999999999999999999999998887 999999987643222 222334588
Q ss_pred CcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhhh
Q 022401 184 PAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIFV 263 (298)
Q Consensus 184 ~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 263 (298)
+.|+|||.+.+..++.+ +||||||+++|+|++|..||...+.. .....+.......+ ..+++++.++|.+||+
T Consensus 159 ~~y~aPE~~~~~~~~~~-~DiwSlGvil~ell~g~~Pf~~~~~~----~~~~~~~~~~~~~p--~~~~~~~~~li~~~L~ 231 (323)
T cd05595 159 PEYLAPEVLEDNDYGRA-VDWWGLGVVMYEMMCGRLPFYNQDHE----RLFELILMEEIRFP--RTLSPEAKSLLAGLLK 231 (323)
T ss_pred cCcCCcccccCCCCCch-hchhhhHHHHHHHHhCCCCCCCCCHH----HHHHHHhcCCCCCC--CCCCHHHHHHHHHHcc
Confidence 99999999987777665 99999999999999999999875542 23333333444333 3479999999999999
Q ss_pred hCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 264 ADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 264 ~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
.||.+|++.... ...++++|||+.+
T Consensus 232 ~dP~~R~~~~~~---~~~~~l~h~~~~~ 256 (323)
T cd05595 232 KDPKQRLGGGPS---DAKEVMEHRFFLS 256 (323)
T ss_pred CCHHHhCCCCCC---CHHHHHcCCCcCC
Confidence 999999843221 2466778888864
No 41
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=3.8e-45 Score=322.53 Aligned_cols=257 Identities=31% Similarity=0.504 Sum_probs=212.5
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC----CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEE
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG----DKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
++|++.+.||+|+||.||++++..+++.||+|++... ......+.+|+.+++.++||||+++++++.++..+++|+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 4799999999999999999999999999999998753 223345778999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCC--
Q 022401 99 EYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ-- 176 (298)
Q Consensus 99 ~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~-- 176 (298)
||+.+++|.+++...+.+++..+..++.|++.||+|||+.|++||||||+||+++.++. ++|+|||++........
T Consensus 81 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~--~kl~Dfg~~~~~~~~~~~~ 158 (364)
T cd05599 81 EYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGH--IKLSDFGLCTGLKKSHRTE 158 (364)
T ss_pred CCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCC--EEEeecccceecccccccc
Confidence 99999999999988888999999999999999999999999999999999999998887 99999998753221100
Q ss_pred -------------------------------------CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCC
Q 022401 177 -------------------------------------PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGY 219 (298)
Q Consensus 177 -------------------------------------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~ 219 (298)
.....|++.|+|||++....++.+ +|||||||++|+|++|..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwSlG~il~el~~G~~ 237 (364)
T cd05599 159 FYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKE-CDWWSLGVIMYEMLVGYP 237 (364)
T ss_pred ccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCe-eeeecchhHHHHhhcCCC
Confidence 012347889999999988777665 999999999999999999
Q ss_pred CCCCCCCchhHHHHHHHHhhcCC--CCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 220 PFEDPDEPKDFRKTIQRILSVQY--SVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 220 pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
||...+.. .....+..... ..+....+++++.++|.+|+. +|.+|++. ....++++|||+.+.
T Consensus 238 Pf~~~~~~----~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~-----~~~~~ll~h~~~~~~ 302 (364)
T cd05599 238 PFCSDNPQ----ETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGN-----NGVNEIKSHPFFKGV 302 (364)
T ss_pred CCCCCCHH----HHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCC-----CCHHHHhcCCCcCCC
Confidence 99876542 23333433322 233333578999999999996 99999973 134777889998643
No 42
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=6.7e-45 Score=316.38 Aligned_cols=252 Identities=31% Similarity=0.517 Sum_probs=207.0
Q ss_pred eeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEeccCCC
Q 022401 29 RDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGG 104 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~~~ 104 (298)
+.||+|+||.||++++..+++.||+|++.... .....+.+|+.+++.++||||+++.+++..+..+++|+||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46899999999999999999999999987532 23356778999999999999999999999999999999999999
Q ss_pred CHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccC-CCCCCCCCCC
Q 022401 105 ELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL-HSQPKSTVGT 183 (298)
Q Consensus 105 sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~-~~~~~~~~~~ 183 (298)
+|...+.....+++.++..++.||+.||+|||++|++|+||||+||+++.++. ++|+|||++..... ........++
T Consensus 81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~--~kL~DfG~~~~~~~~~~~~~~~~gt 158 (328)
T cd05593 81 ELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGH--IKITDFGLCKEGITDAATMKTFCGT 158 (328)
T ss_pred CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCc--EEEecCcCCccCCCcccccccccCC
Confidence 99999988888999999999999999999999999999999999999998887 99999998764322 1222334588
Q ss_pred CcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhhh
Q 022401 184 PAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIFV 263 (298)
Q Consensus 184 ~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 263 (298)
+.|+|||.+.+..++.+ +||||||+++|+|++|..||...+. .+....+.......+ ..+++++.++|++||+
T Consensus 159 ~~y~aPE~~~~~~~~~~-~DiwslGvil~elltG~~Pf~~~~~----~~~~~~~~~~~~~~p--~~~~~~~~~li~~~L~ 231 (328)
T cd05593 159 PEYLAPEVLEDNDYGRA-VDWWGLGVVMYEMMCGRLPFYNQDH----EKLFELILMEDIKFP--RTLSADAKSLLSGLLI 231 (328)
T ss_pred cCccChhhhcCCCCCcc-CCccccchHHHHHhhCCCCCCCCCH----HHHHHHhccCCccCC--CCCCHHHHHHHHHHcC
Confidence 99999999987777665 9999999999999999999987543 233333434444333 3479999999999999
Q ss_pred hCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 264 ADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 264 ~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
.||.+|++... -...++++|||+.+.
T Consensus 232 ~dP~~R~~~~~---~~~~~il~h~~~~~~ 257 (328)
T cd05593 232 KDPNKRLGGGP---DDAKEIMRHSFFTGV 257 (328)
T ss_pred CCHHHcCCCCC---CCHHHHhcCCCcCCC
Confidence 99999983211 023566678887653
No 43
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=1.3e-44 Score=318.90 Aligned_cols=254 Identities=27% Similarity=0.450 Sum_probs=208.5
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEE
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
++|++.+.||+|+||.||++++..+++.||+|++.... .....+.+|+.++.+++|+||+++++.+.+...+|+|+
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 47999999999999999999999999999999987532 23356778999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC---
Q 022401 99 EYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS--- 175 (298)
Q Consensus 99 ~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~--- 175 (298)
||+++++|.+++.....+++..+..++.|++.||+|||+.|++||||||+||+++.++. ++|+|||++.......
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~--vkL~DFGla~~~~~~~~~~ 158 (363)
T cd05628 81 EFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGH--VKLSDFGLCTGLKKAHRTE 158 (363)
T ss_pred cCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCC--EEEeeccCccccccccccc
Confidence 99999999999988889999999999999999999999999999999999999998887 9999999986332110
Q ss_pred ---------------------------------CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCC
Q 022401 176 ---------------------------------QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFE 222 (298)
Q Consensus 176 ---------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~ 222 (298)
......|++.|+|||++.+..++.+ +|||||||++|+|++|..||.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~-~DvwSlGvil~ell~G~~Pf~ 237 (363)
T cd05628 159 FYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKL-CDWWSLGVIMYEMLIGYPPFC 237 (363)
T ss_pred ccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCc-hhhhhhHHHHHHHHhCCCCCC
Confidence 0012358899999999988877665 999999999999999999998
Q ss_pred CCCCchhHHHHHHHHhhc--CCCCCCCCCCCHHHHHHHHHhhhhCCCC---cccccccchhhhHHHhhhhhhhhh
Q 022401 223 DPDEPKDFRKTIQRILSV--QYSVPDTNPISQECRDLISRIFVADPAA---VSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~dp~~---Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
..... +...++... ....+....+++++.++|.+|+. +|.+ ||++ .++++|||+.+.
T Consensus 238 ~~~~~----~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~--------~ei~~hp~f~~~ 299 (363)
T cd05628 238 SETPQ----ETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGV--------EEIKTNPFFEGV 299 (363)
T ss_pred CCCHH----HHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCH--------HHHhCCCCCCCC
Confidence 76543 333334332 22333333478999999999774 4554 4655 666789998754
No 44
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=2.3e-44 Score=312.68 Aligned_cols=257 Identities=30% Similarity=0.480 Sum_probs=213.6
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC----CcchHHHHHHHHHHhcCCC-CCeeeeeEEEEeCCeEEEEE
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG----DKIDENVQREIINHRSLRH-PNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~----~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~ 98 (298)
+|++.+.||+|+||.||++++..+++.||+|++... ....+.+..|..++..+.| ++++++++++...+.+|+|+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 589999999999999999999989999999998753 2233556778888888876 56888999999999999999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccC-CCCC
Q 022401 99 EYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL-HSQP 177 (298)
Q Consensus 99 ~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~-~~~~ 177 (298)
||+++++|...+.....+++..+..++.|++.||+|||+.|++||||||+||+++.++. ++|+|||++..... ....
T Consensus 81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~--~kL~Dfg~~~~~~~~~~~~ 158 (324)
T cd05587 81 EYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGH--IKIADFGMCKENIFGGKTT 158 (324)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCC--EEEeecCcceecCCCCCce
Confidence 99999999999988888999999999999999999999999999999999999998887 99999998763221 2222
Q ss_pred CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHH
Q 022401 178 KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDL 257 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (298)
....+++.|+|||++.+..++.+ +||||+|+++|+|++|..||..... ......+.......+ ..++.++.++
T Consensus 159 ~~~~gt~~y~aPE~~~~~~~~~~-~DiwslGvil~elltG~~pf~~~~~----~~~~~~i~~~~~~~~--~~~~~~~~~l 231 (324)
T cd05587 159 RTFCGTPDYIAPEIIAYQPYGKS-VDWWAFGVLLYEMLAGQPPFDGEDE----DELFQSIMEHNVSYP--KSLSKEAVSI 231 (324)
T ss_pred eeecCCccccChhhhcCCCCCcc-cchhhhHHHHHHHHhCCCCCCCCCH----HHHHHHHHcCCCCCC--CCCCHHHHHH
Confidence 34458899999999988777665 9999999999999999999987654 333444444444433 3479999999
Q ss_pred HHHhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 258 ISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 258 i~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
+.+||..||.+|++.... ...++++|||+...
T Consensus 232 i~~~l~~~P~~R~~~~~~---~~~~~~~hp~~~~~ 263 (324)
T cd05587 232 CKGLLTKHPAKRLGCGPT---GERDIREHAFFRRI 263 (324)
T ss_pred HHHHhhcCHHHcCCCCCC---CHHHHhcCCCcCCC
Confidence 999999999999987542 24678899998754
No 45
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.1e-44 Score=313.96 Aligned_cols=253 Identities=31% Similarity=0.473 Sum_probs=210.8
Q ss_pred eeeccCCeEEEEEEEEccCCcEEEEEEeecC----CcchHHHHHHHHHHhcC-CCCCeeeeeEEEEeCCeEEEEEeccCC
Q 022401 29 RDIGSGNFGVARLMRDKVTKELVAVKYIERG----DKIDENVQREIINHRSL-RHPNIVRFKEVILTPTHLAIVMEYASG 103 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~----~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~~~~~~ 103 (298)
+.||+|+||.||+++++.+++.||+|++... ......+..|..++..+ +||||+++++++...+.+++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 4689999999999999999999999998753 22334566788888766 699999999999999999999999999
Q ss_pred CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccC-CCCCCCCCC
Q 022401 104 GELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL-HSQPKSTVG 182 (298)
Q Consensus 104 ~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~-~~~~~~~~~ 182 (298)
++|...+.....+++..+..++.|++.||.|||+.|++||||||+||+++.++. ++|+|||++..... ........+
T Consensus 81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~--~kL~DfG~~~~~~~~~~~~~~~~g 158 (320)
T cd05590 81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGH--CKLADFGMCKEGIFNGKTTSTFCG 158 (320)
T ss_pred chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCc--EEEeeCCCCeecCcCCCccccccc
Confidence 999999988888999999999999999999999999999999999999998887 99999998764322 222234458
Q ss_pred CCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhh
Q 022401 183 TPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIF 262 (298)
Q Consensus 183 ~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 262 (298)
++.|+|||.+.+..++.+ +||||||+++|+|++|..||...+. ......+.......+ ..+++++.+++++||
T Consensus 159 t~~y~aPE~~~~~~~~~~-~DiwslG~il~el~~g~~Pf~~~~~----~~~~~~i~~~~~~~~--~~~~~~~~~li~~~L 231 (320)
T cd05590 159 TPDYIAPEILQEMLYGPS-VDWWAMGVLLYEMLCGHAPFEAENE----DDLFEAILNDEVVYP--TWLSQDAVDILKAFM 231 (320)
T ss_pred CccccCHHHHcCCCCCCc-cchhhhHHHHHHHhhCCCCCCCCCH----HHHHHHHhcCCCCCC--CCCCHHHHHHHHHHc
Confidence 899999999987777665 9999999999999999999987654 233444444444333 347999999999999
Q ss_pred hhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 263 VADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 263 ~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
+.||.+||++.+.. ...+++.|||+.+.
T Consensus 232 ~~dP~~R~~~~~~~--~~~~~~~h~~f~~~ 259 (320)
T cd05590 232 TKNPTMRLGSLTLG--GEEAILRHPFFKEL 259 (320)
T ss_pred ccCHHHCCCCCCCC--CHHHHHcCCCcCCC
Confidence 99999999987642 45778899999753
No 46
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.1e-44 Score=319.78 Aligned_cols=263 Identities=30% Similarity=0.444 Sum_probs=214.9
Q ss_pred CCCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC----CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCe
Q 022401 18 IMHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG----DKIDENVQREIINHRSLRHPNIVRFKEVILTPTH 93 (298)
Q Consensus 18 ~~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 93 (298)
.....++|++.+.||+|+||.||++++..+++.||+|++... ......+.+|+.+++.++||||+++++++.+++.
T Consensus 38 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~ 117 (370)
T cd05596 38 LRMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKY 117 (370)
T ss_pred CCCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence 345568999999999999999999999999999999998653 1223456789999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccC
Q 022401 94 LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 173 (298)
Q Consensus 94 ~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~ 173 (298)
+++|+||+++++|.+++... .+++..+..++.|++.||+|||+.|++||||||+||+++.++. ++|+|||++.....
T Consensus 118 ~~lv~Ey~~gg~L~~~l~~~-~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~--~kL~DfG~~~~~~~ 194 (370)
T cd05596 118 LYMVMEYMPGGDLVNLMSNY-DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGH--LKLADFGTCMKMDA 194 (370)
T ss_pred EEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCC--EEEEeccceeeccC
Confidence 99999999999999988654 5889999999999999999999999999999999999998887 99999999865432
Q ss_pred CC--CCCCCCCCCcccCcccccccc---CCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcC--CCCCC
Q 022401 174 HS--QPKSTVGTPAYIAPEVLLRHE---YDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQ--YSVPD 246 (298)
Q Consensus 174 ~~--~~~~~~~~~~~~aPE~~~~~~---~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~ 246 (298)
.. ......+++.|+|||.+.+.. ....++|||||||++|+|++|..||...+.. .....+.... ...+.
T Consensus 195 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~----~~~~~i~~~~~~~~~~~ 270 (370)
T cd05596 195 NGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV----GTYSKIMDHKNSLTFPD 270 (370)
T ss_pred CCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH----HHHHHHHcCCCcCCCCC
Confidence 22 123456899999999986543 2344599999999999999999999876543 3334443332 33444
Q ss_pred CCCCCHHHHHHHHHhhhhCCCC--cccccccchhhhHHHhhhhhhhhhhhh
Q 022401 247 TNPISQECRDLISRIFVADPAA--VSIFFFPLNMSCLLLFSFVWMFDATEN 295 (298)
Q Consensus 247 ~~~~~~~l~~li~~~l~~dp~~--Rps~~~~l~~~~~~~~~hp~~~~~~~~ 295 (298)
...++.++.++|.+||+.+|.+ |+|+ .++++|||+.+...+
T Consensus 271 ~~~~s~~~~~li~~~L~~~p~r~~R~s~--------~ell~h~~~~~~~~~ 313 (370)
T cd05596 271 DIEISKQAKDLICAFLTDREVRLGRNGV--------DEIKSHPFFKNDQWT 313 (370)
T ss_pred cCCCCHHHHHHHHHHccChhhccCCCCH--------HHHhcCcccCCCChh
Confidence 4457999999999999999987 8876 666788888764433
No 47
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=2.1e-44 Score=312.90 Aligned_cols=255 Identities=33% Similarity=0.491 Sum_probs=209.5
Q ss_pred eeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHH---hcCCCCCeeeeeEEEEeCCeEEEE
Q 022401 25 YDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINH---RSLRHPNIVRFKEVILTPTHLAIV 97 (298)
Q Consensus 25 y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l---~~l~h~~i~~~~~~~~~~~~~~lv 97 (298)
|++.+.||+|++|.||++++..+++.||+|++.... ...+.+..|..++ +.++||||+++++++...+..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 789999999999999999999999999999987532 2234455665554 567899999999999999999999
Q ss_pred EeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC-CC
Q 022401 98 MEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH-SQ 176 (298)
Q Consensus 98 ~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~-~~ 176 (298)
+||+++++|...+.. ..+++..++.++.|++.||+|||+.|++|+||||+||+++.++. ++|+|||++...... ..
T Consensus 81 ~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~--~kL~Dfg~~~~~~~~~~~ 157 (324)
T cd05589 81 MEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGF--VKIADFGLCKEGMGFGDR 157 (324)
T ss_pred EcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCc--EEeCcccCCccCCCCCCc
Confidence 999999999887744 56899999999999999999999999999999999999998887 999999987643222 22
Q ss_pred CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHH
Q 022401 177 PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRD 256 (298)
Q Consensus 177 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 256 (298)
.....+++.|+|||.+.+..++.+ +||||||+++|+|++|..||...+.. .....+.......+ ..++.++.+
T Consensus 158 ~~~~~g~~~y~aPE~~~~~~~~~~-~DiwslG~il~el~~G~~pf~~~~~~----~~~~~i~~~~~~~p--~~~~~~~~~ 230 (324)
T cd05589 158 TSTFCGTPEFLAPEVLTETSYTRA-VDWWGLGVLIYEMLVGESPFPGDDEE----EVFDSIVNDEVRYP--RFLSREAIS 230 (324)
T ss_pred ccccccCccccCHhHhcCCCCCcc-cchhhHHHHHHHHHhCCCCCCCCCHH----HHHHHHHhCCCCCC--CCCCHHHHH
Confidence 234568899999999987777655 99999999999999999999876542 33334444444333 347999999
Q ss_pred HHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 257 LISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 257 li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
+|.+||+.||.+||++.+. ...++++|||+.+.
T Consensus 231 li~~~L~~dP~~R~~~~~~---~~~~l~~~~~f~~~ 263 (324)
T cd05589 231 IMRRLLRRNPERRLGSGEK---DAEDVKKQPFFRDI 263 (324)
T ss_pred HHHHHhhcCHhHcCCCCCC---CHHHHhhCCCcCCC
Confidence 9999999999999987654 35788899998754
No 48
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.1e-44 Score=321.09 Aligned_cols=256 Identities=28% Similarity=0.454 Sum_probs=208.7
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEE
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
++|++++.||+|+||.||++++..+++.||+|++.+.. .....+.+|+.++++++||||+++++++.++..+|+|+
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 47999999999999999999999999999999986532 23356778999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCC--
Q 022401 99 EYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ-- 176 (298)
Q Consensus 99 ~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~-- 176 (298)
||+++++|.+++.....+++..+..++.|++.||+|||+.|++||||||+||+++.++. ++|+|||++........
T Consensus 81 E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~--~kl~DfGla~~~~~~~~~~ 158 (377)
T cd05629 81 EFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGH--IKLSDFGLSTGFHKQHDSA 158 (377)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCC--EEEeecccccccccccccc
Confidence 99999999999988888999999999999999999999999999999999999998887 99999998852211000
Q ss_pred ----------------------------------------------CCCCCCCCcccCccccccccCCCCccchHHHHHH
Q 022401 177 ----------------------------------------------PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVT 210 (298)
Q Consensus 177 ----------------------------------------------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~l 210 (298)
.....|++.|+|||.+.+..++.+ +|||||||+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwSlGvi 237 (377)
T cd05629 159 YYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQE-CDWWSLGAI 237 (377)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCc-eeeEecchh
Confidence 001347889999999988777665 999999999
Q ss_pred HHHHHhCCCCCCCCCCchhHHHHHHHHhhc--CCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhh
Q 022401 211 LYVMLVGGYPFEDPDEPKDFRKTIQRILSV--QYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVW 288 (298)
Q Consensus 211 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~ 288 (298)
+|+|++|..||......+. ...+... ....+....++.++.+||.+||. +|.+|+.. ....++++|||
T Consensus 238 l~elltG~~Pf~~~~~~~~----~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r-----~~~~~~l~hp~ 307 (377)
T cd05629 238 MFECLIGWPPFCSENSHET----YRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGR-----GGAHEIKSHPF 307 (377)
T ss_pred hhhhhcCCCCCCCCCHHHH----HHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCC-----CCHHHHhcCCC
Confidence 9999999999987654332 2333322 22334444578999999999997 77776521 13367778888
Q ss_pred hhh
Q 022401 289 MFD 291 (298)
Q Consensus 289 ~~~ 291 (298)
+.+
T Consensus 308 ~~~ 310 (377)
T cd05629 308 FRG 310 (377)
T ss_pred cCC
Confidence 864
No 49
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=5.1e-44 Score=303.85 Aligned_cols=253 Identities=23% Similarity=0.319 Sum_probs=207.9
Q ss_pred eccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEeccCCCCH
Q 022401 31 IGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 106 (298)
Q Consensus 31 lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~~~sL 106 (298)
||+|+||.||+++...+|+.||+|.+.... .....+..|++++++++||||+++.+++..+..+++|+||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999999999999999886432 1223455699999999999999999999999999999999999999
Q ss_pred HHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCCCCCCCCC
Q 022401 107 FERICNAG--RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTP 184 (298)
Q Consensus 107 ~~~l~~~~--~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~ 184 (298)
.+.+.... .++...+..++.|++.|++|||+.|++|+||+|+||+++.++. ++|+|||++.............++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~--~~l~Dfg~~~~~~~~~~~~~~~~~~ 158 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGN--CRLSDLGLAVELKDGKTITQRAGTN 158 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCC--EEEeeceeeeecCCCceeeccCCCC
Confidence 88875443 5888999999999999999999999999999999999998887 9999999886554333333456788
Q ss_pred cccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhhhh
Q 022401 185 AYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIFVA 264 (298)
Q Consensus 185 ~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~ 264 (298)
.|+|||++.+..++.+ +|+||+|+++|+|++|..||........................ ...+++++.+++++||+.
T Consensus 159 ~y~aPE~~~~~~~~~~-~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~L~~ 236 (277)
T cd05607 159 GYMAPEILKEEPYSYP-VDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFE-HQNFTEESKDICRLFLAK 236 (277)
T ss_pred CccCHHHHccCCCCCc-hhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccc-cccCCHHHHHHHHHHhcc
Confidence 9999999987776555 99999999999999999999865443333334444443333322 234799999999999999
Q ss_pred CCCCcccccccchhhhHHHhhhhhhhh
Q 022401 265 DPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 265 dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
||.+||++.+++ .+++.|||+.+
T Consensus 237 ~P~~R~~~~~~~----~~~~~h~~f~~ 259 (277)
T cd05607 237 KPEDRLGSREKN----DDPRKHEFFKT 259 (277)
T ss_pred CHhhCCCCccch----hhhhcChhhcC
Confidence 999999998876 57778999865
No 50
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=4.4e-44 Score=305.46 Aligned_cols=260 Identities=24% Similarity=0.332 Sum_probs=214.4
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEe
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVME 99 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~ 99 (298)
.|++.+.||+|+||.||++.+..+++.||+|++.... .....+.+|+.++++++||||+++.+++..+..+++|+|
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 4899999999999999999998889999999987532 122446789999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCC
Q 022401 100 YASGGELFERICNA--GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP 177 (298)
Q Consensus 100 ~~~~~sL~~~l~~~--~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~ 177 (298)
|+.+++|.+.+... ..+++..+..++.|++.|+.|||+.|++|+||+|+||++++++. ++|+|||++.........
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~--~~l~Dfg~~~~~~~~~~~ 158 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGH--IRISDLGLAVEIPEGETI 158 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCC--EEEeeCCCceecCCCCcc
Confidence 99999999887543 35899999999999999999999999999999999999998877 999999998754433333
Q ss_pred CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHH
Q 022401 178 KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDL 257 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (298)
....+++.|+|||.+.+..++.+ +||||+|+++|++++|..||...............+....... +..++..+.++
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~-~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l 235 (285)
T cd05605 159 RGRVGTVGYMAPEVVKNERYTFS-PDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEY--SEKFSEAARSI 235 (285)
T ss_pred ccccCCCCccCcHHhcCCCCCcc-ccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhccccc--CcccCHHHHHH
Confidence 34467889999999987777665 9999999999999999999987665443333333333333222 33478999999
Q ss_pred HHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 258 ISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 258 i~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
+.+||+.||.+||+..+. ...++++|||+..
T Consensus 236 i~~~l~~~P~~R~~~~~~---~~~~l~~~~~~~~ 266 (285)
T cd05605 236 CRQLLTKDPGFRLGCRGE---GAEEVKAHPFFRT 266 (285)
T ss_pred HHHHccCCHHHhcCCCCC---CHHHHhcCcCccC
Confidence 999999999999966532 3467889999975
No 51
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=2.9e-44 Score=312.62 Aligned_cols=256 Identities=27% Similarity=0.422 Sum_probs=209.5
Q ss_pred eeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhcC-CCCCeeeeeEEEEeCCeEEEEEeccCC
Q 022401 29 RDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRSL-RHPNIVRFKEVILTPTHLAIVMEYASG 103 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~~~~~~ 103 (298)
+.||+|+||.||++++..+++.||+|++.... .....+..|..++.++ +||||+++++++..++.+++|+||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 47899999999999999999999999987532 2234577889999888 799999999999999999999999999
Q ss_pred CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccC-CCCCCCCCC
Q 022401 104 GELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL-HSQPKSTVG 182 (298)
Q Consensus 104 ~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~-~~~~~~~~~ 182 (298)
++|...+.....+++..+..++.|++.||.|||++|++||||+|+||+++.++. ++|+|||++..... ........+
T Consensus 81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~--~kL~Dfg~~~~~~~~~~~~~~~~g 158 (329)
T cd05588 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGH--IKLTDYGMCKEGIRPGDTTSTFCG 158 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCC--EEECcCccccccccCCCccccccC
Confidence 999999988888999999999999999999999999999999999999998887 99999998864221 222234467
Q ss_pred CCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCch-----hHHHHHHHHhhcCCCCCCCCCCCHHHHHH
Q 022401 183 TPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPK-----DFRKTIQRILSVQYSVPDTNPISQECRDL 257 (298)
Q Consensus 183 ~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (298)
++.|+|||++.+..++.+ +|+||||+++|+|++|..||......+ ......+.+.......+ ..++.++.++
T Consensus 159 t~~y~aPE~~~~~~~~~~-~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~l 235 (329)
T cd05588 159 TPNYIAPEILRGEDYGFS-VDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIP--RSLSVKASSV 235 (329)
T ss_pred CccccCHHHHcCCCCCCc-cceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCC--CCCCHHHHHH
Confidence 899999999988777665 999999999999999999996432111 11222333444444433 3478999999
Q ss_pred HHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 258 ISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 258 i~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
|.+||+.||.+|+++.... ...++++|||+.+
T Consensus 236 i~~~L~~dP~~R~~~~~~~--~~~~i~~hp~~~~ 267 (329)
T cd05588 236 LKGFLNKDPKERLGCHPQT--GFRDIKSHPFFRN 267 (329)
T ss_pred HHHHhccCHHHcCCCCCCC--CHHHHhcCCCCCC
Confidence 9999999999999864332 4678889999965
No 52
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=4.7e-44 Score=304.52 Aligned_cols=253 Identities=29% Similarity=0.377 Sum_probs=207.5
Q ss_pred eccCCeEEEEEEEEccCCcEEEEEEeecCCc----chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEeccCCCCH
Q 022401 31 IGSGNFGVARLMRDKVTKELVAVKYIERGDK----IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 106 (298)
Q Consensus 31 lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~~~sL 106 (298)
||+|+||.||.+.+..+++.+|+|.+..... ..+.+..|+.++++++|+|++++.+++..+..+++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 6999999999999999999999999875322 224567899999999999999999999999999999999999999
Q ss_pred HHHHH----hCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC-CCCCCC
Q 022401 107 FERIC----NAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-QPKSTV 181 (298)
Q Consensus 107 ~~~l~----~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~ 181 (298)
...+. ....+++..++.++.|++.||+|||+.|++|+||+|+||+++.++. ++|+|||++....... ......
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~--~~l~dfg~~~~~~~~~~~~~~~~ 158 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGN--VRISDLGLAVELKDGQSKTKGYA 158 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCC--EEEeeCccceecCCCCccccccC
Confidence 88774 3346899999999999999999999999999999999999988776 9999999886433222 222345
Q ss_pred CCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHh
Q 022401 182 GTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRI 261 (298)
Q Consensus 182 ~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 261 (298)
+++.|+|||.+.+..++.+ +|+||+|+++|+|++|..||...............+..... ..+..+++++.+++.+|
T Consensus 159 g~~~y~aPE~~~~~~~~~~-~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~ 235 (280)
T cd05608 159 GTPGFMAPELLQGEEYDFS-VDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSV--TYPDKFSPASKSFCEAL 235 (280)
T ss_pred CCcCccCHHHhcCCCCCcc-ccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCC--CCcccCCHHHHHHHHHH
Confidence 7889999999988877665 99999999999999999999876543333333444433332 23344799999999999
Q ss_pred hhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 262 FVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 262 l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
|+.||++||++.+.. ..++++|||+.+
T Consensus 236 l~~~P~~R~~~~~~~---~~~~l~h~~~~~ 262 (280)
T cd05608 236 LAKDPEKRLGFRDGN---CDGLRTHPLFRD 262 (280)
T ss_pred hcCCHHHhcCCCCCC---HHHHhcChhhhc
Confidence 999999999776543 478889999986
No 53
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=5.4e-45 Score=317.44 Aligned_cols=254 Identities=29% Similarity=0.479 Sum_probs=209.9
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc----chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEE
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK----IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
++|++.+.||+|+||.||++++..+++.||+|++..... ....+.+|+.+++.++|+||+++++++.++..+++|+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 479999999999999999999999999999999876422 3455778999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCC-
Q 022401 99 EYASGGELFERICNA-GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ- 176 (298)
Q Consensus 99 ~~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~- 176 (298)
||+++++|.+++... ..+++..+..++.|++.||.|||+.|++||||+|+||+++.++. ++|+|||++........
T Consensus 81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~--~kL~Dfg~a~~~~~~~~~ 158 (330)
T cd05601 81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGH--IKLADFGSAARLTANKMV 158 (330)
T ss_pred CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCC--EEeccCCCCeECCCCCce
Confidence 999999999999776 67999999999999999999999999999999999999998887 99999999864433221
Q ss_pred -CCCCCCCCcccCcccccc------ccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcC--CCCCCC
Q 022401 177 -PKSTVGTPAYIAPEVLLR------HEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQ--YSVPDT 247 (298)
Q Consensus 177 -~~~~~~~~~~~aPE~~~~------~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~ 247 (298)
.....+++.|+|||++.. ..+ ..++||||||+++|+|++|..||........ ..++.... ...+..
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~-~~~~DiwslG~il~el~~g~~Pf~~~~~~~~----~~~i~~~~~~~~~~~~ 233 (330)
T cd05601 159 NSKLPVGTPDYIAPEVLTTMNGDGKGTY-GVECDWWSLGVIAYEMIYGRSPFHEGTSAKT----YNNIMNFQRFLKFPED 233 (330)
T ss_pred eeecccCCccccCHHHhccccccccCCC-CCcceeecccceeeeeccCCCCCCCCCHHHH----HHHHHcCCCccCCCCC
Confidence 223457889999999863 233 3449999999999999999999987665333 33333322 233444
Q ss_pred CCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 248 NPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 248 ~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
..+++++.+++..||+ ||.+|||+ .++++|||+...
T Consensus 234 ~~~~~~~~~li~~ll~-~p~~R~t~--------~~l~~h~~~~~~ 269 (330)
T cd05601 234 PKVSSDFLDLIQSLLC-GQKERLGY--------EGLCCHPFFSKI 269 (330)
T ss_pred CCCCHHHHHHHHHHcc-ChhhCCCH--------HHHhCCCCcCCC
Confidence 4579999999999997 99999987 556688887653
No 54
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=3.3e-44 Score=318.23 Aligned_cols=254 Identities=28% Similarity=0.430 Sum_probs=207.6
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEE
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
+.|++++.||+|+||.||++++..+++.||+|++.... .....+.+|+.++++++||||+++++++.+...+++|+
T Consensus 1 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~ 80 (381)
T cd05626 1 SMFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (381)
T ss_pred CCceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEE
Confidence 36999999999999999999999999999999987532 23356788999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC---
Q 022401 99 EYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS--- 175 (298)
Q Consensus 99 ~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~--- 175 (298)
||+++++|.+++.....+++..+..++.|++.||+|||+.|++||||||+||+++.++. ++|+|||++.......
T Consensus 81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~--~kL~DFGl~~~~~~~~~~~ 158 (381)
T cd05626 81 DYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGH--IKLTDFGLCTGFRWTHNSK 158 (381)
T ss_pred ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCC--EEEeeCcCCcccccccccc
Confidence 99999999999988888999999999999999999999999999999999999998877 9999999864211000
Q ss_pred ---------------------------------------------CCCCCCCCCcccCccccccccCCCCccchHHHHHH
Q 022401 176 ---------------------------------------------QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVT 210 (298)
Q Consensus 176 ---------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~l 210 (298)
......|++.|+|||.+.+..++.+ +|||||||+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~-~DiwSlG~i 237 (381)
T cd05626 159 YYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQL-CDWWSVGVI 237 (381)
T ss_pred cccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCc-cceeehhhH
Confidence 0012357889999999988777665 999999999
Q ss_pred HHHHHhCCCCCCCCCCchhHHHHHHHHhh--cCCCCCCCCCCCHHHHHHHHHhh--hhCCCCcccccccchhhhHHHhhh
Q 022401 211 LYVMLVGGYPFEDPDEPKDFRKTIQRILS--VQYSVPDTNPISQECRDLISRIF--VADPAAVSIFFFPLNMSCLLLFSF 286 (298)
Q Consensus 211 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~~l--~~dp~~Rps~~~~l~~~~~~~~~h 286 (298)
+|+|++|..||......... .++.. .....+....+++++.+||.+|+ ..+|..|+++ .+++.|
T Consensus 238 l~elltG~~Pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~--------~~~l~h 305 (381)
T cd05626 238 LFEMLVGQPPFLAPTPTETQ----LKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGA--------DDIKAH 305 (381)
T ss_pred HHHHHhCCCCCcCCCHHHHH----HHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCH--------HHHhcC
Confidence 99999999999876543222 22222 22334444457899999999955 4556669977 555678
Q ss_pred hhhhh
Q 022401 287 VWMFD 291 (298)
Q Consensus 287 p~~~~ 291 (298)
||+.+
T Consensus 306 p~f~~ 310 (381)
T cd05626 306 PFFSE 310 (381)
T ss_pred cccCC
Confidence 88764
No 55
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=3e-44 Score=312.42 Aligned_cols=257 Identities=27% Similarity=0.428 Sum_probs=208.9
Q ss_pred eeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhcC-CCCCeeeeeEEEEeCCeEEEEEeccCC
Q 022401 29 RDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRSL-RHPNIVRFKEVILTPTHLAIVMEYASG 103 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~~~~~~ 103 (298)
+.||+|+||.||++++..+++.+|+|++.+.. .....+..|+.++.++ +||||+++++++..++.+++|+||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 47999999999999999999999999987632 2234566788888776 899999999999999999999999999
Q ss_pred CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccC-CCCCCCCCC
Q 022401 104 GELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL-HSQPKSTVG 182 (298)
Q Consensus 104 ~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~-~~~~~~~~~ 182 (298)
++|...+.....+++..++.++.|++.||.|||++|++||||||+||+++.++. ++|+|||++..... ........+
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~--~kL~DfG~~~~~~~~~~~~~~~~g 158 (329)
T cd05618 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGH--IKLTDYGMCKEGLRPGDTTSTFCG 158 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCC--EEEeeCCccccccCCCCccccccC
Confidence 999999988888999999999999999999999999999999999999998887 99999998864322 222234467
Q ss_pred CCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCC-----chhHHHHHHHHhhcCCCCCCCCCCCHHHHHH
Q 022401 183 TPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDE-----PKDFRKTIQRILSVQYSVPDTNPISQECRDL 257 (298)
Q Consensus 183 ~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (298)
++.|+|||++.+..++.+ +|+||||+++|+|++|..||..... ........+.+.......+ ..++.++.++
T Consensus 159 t~~y~aPE~~~~~~~~~~-~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p--~~~~~~~~~l 235 (329)
T cd05618 159 TPNYIAPEILRGEDYGFS-VDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP--RSLSVKAASV 235 (329)
T ss_pred CccccCHHHHcCCCCCCc-cceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCC--CCCCHHHHHH
Confidence 899999999988777665 9999999999999999999963221 1111223333444444443 3478999999
Q ss_pred HHHhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 258 ISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 258 i~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
+.+||+.||.+||++.... ...++++|||+.+.
T Consensus 236 l~~~L~~dP~~R~~~~~~~--~~~~i~~hp~f~~~ 268 (329)
T cd05618 236 LKSFLNKDPKERLGCHPQT--GFADIQGHPFFRNV 268 (329)
T ss_pred HHHHhcCCHHHcCCCCCCC--CHHHHhcCCCCCCC
Confidence 9999999999999964332 35788899999653
No 56
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.1e-44 Score=296.00 Aligned_cols=270 Identities=27% Similarity=0.354 Sum_probs=223.2
Q ss_pred CCCCcCCCCCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcch---HHHHHHHHHHhcCCCCCeeeeeEE
Q 022401 11 GPAMDMPIMHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKID---ENVQREIINHRSLRHPNIVRFKEV 87 (298)
Q Consensus 11 ~~~~~~~~~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~ 87 (298)
-++...-.+-+.+.|+.+..|++|.||.||.|+++.+++.||+|++.-+.... -.-.+|+++|.+++|||||.+.++
T Consensus 64 ~~~~~l~gCrsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEV 143 (419)
T KOG0663|consen 64 LKQELLGGCRSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEV 143 (419)
T ss_pred cccccccCcccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEE
Confidence 44444677888999999999999999999999999999999999987654322 235689999999999999999999
Q ss_pred EEeC--CeEEEEEeccCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEee
Q 022401 88 ILTP--THLAIVMEYASGGELFERICNAG-RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICD 164 (298)
Q Consensus 88 ~~~~--~~~~lv~~~~~~~sL~~~l~~~~-~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d 164 (298)
.... +.+|+||+|++. +|.+++.+-+ ++...+++-++.|++.|++|||.+.|+||||||+|+|++..|. +|++|
T Consensus 144 VvG~~~d~iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~--lKiaD 220 (419)
T KOG0663|consen 144 VVGSNMDKIYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGI--LKIAD 220 (419)
T ss_pred EeccccceeeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCc--EEecc
Confidence 8754 479999999976 8999997765 7999999999999999999999999999999999999999998 99999
Q ss_pred cCccccccCCCCC-CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCC-
Q 022401 165 FGYSKSSVLHSQP-KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQY- 242 (298)
Q Consensus 165 ~~~~~~~~~~~~~-~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~- 242 (298)
||+|+........ .....+.+|.|||.+.+.+-++.+.|+||+||++.|++++.+.|.+..+.+++....+-+....-
T Consensus 221 FGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~ 300 (419)
T KOG0663|consen 221 FGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEA 300 (419)
T ss_pred cchhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccc
Confidence 9999866554332 33446889999999999877777799999999999999999999998887777666655422110
Q ss_pred ------CCCCC------------------C-CCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 243 ------SVPDT------------------N-PISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 243 ------~~~~~------------------~-~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
.++.- . .+++.-.+|+..+|.+||.+|.|+.++| .|.|+.+
T Consensus 301 iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L--------~h~~F~e 366 (419)
T KOG0663|consen 301 IWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGL--------KHEYFRE 366 (419)
T ss_pred cCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhh--------ccccccc
Confidence 00000 0 1568899999999999999999995555 7777775
No 57
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.9e-44 Score=318.13 Aligned_cols=264 Identities=28% Similarity=0.430 Sum_probs=213.7
Q ss_pred CCCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC----CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCe
Q 022401 18 IMHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG----DKIDENVQREIINHRSLRHPNIVRFKEVILTPTH 93 (298)
Q Consensus 18 ~~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 93 (298)
.....++|++.+.||+|+||.||++++..+++.+|+|++.+. ......+.+|+.+++.++||||+++++++.++..
T Consensus 38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~ 117 (370)
T cd05621 38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKY 117 (370)
T ss_pred cCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence 345568999999999999999999999999999999998652 2233457789999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccC
Q 022401 94 LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 173 (298)
Q Consensus 94 ~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~ 173 (298)
+++|+||+++++|.+++... .+++..+..++.|++.||+|||++|++||||||+||+++.++. +||+|||++.....
T Consensus 118 ~~lv~Ey~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~--~kL~DFG~a~~~~~ 194 (370)
T cd05621 118 LYMVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGH--LKLADFGTCMKMDE 194 (370)
T ss_pred EEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCC--EEEEecccceeccc
Confidence 99999999999999988654 5899999999999999999999999999999999999998887 99999999875432
Q ss_pred CCC--CCCCCCCCcccCcccccccc---CCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcC--CCCCC
Q 022401 174 HSQ--PKSTVGTPAYIAPEVLLRHE---YDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQ--YSVPD 246 (298)
Q Consensus 174 ~~~--~~~~~~~~~~~aPE~~~~~~---~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~ 246 (298)
... .....+++.|+|||++.+.. ....++|+||+|+++|+|++|..||...+... ...++.... ...+.
T Consensus 195 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~----~~~~i~~~~~~~~~p~ 270 (370)
T cd05621 195 TGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVG----TYSKIMDHKNSLNFPE 270 (370)
T ss_pred CCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHH----HHHHHHhCCcccCCCC
Confidence 221 23456899999999987543 23445999999999999999999998765433 333443322 33444
Q ss_pred CCCCCHHHHHHHHHhhhhCCCC--cccccccchhhhHHHhhhhhhhhhhhhc
Q 022401 247 TNPISQECRDLISRIFVADPAA--VSIFFFPLNMSCLLLFSFVWMFDATENY 296 (298)
Q Consensus 247 ~~~~~~~l~~li~~~l~~dp~~--Rps~~~~l~~~~~~~~~hp~~~~~~~~~ 296 (298)
...++..+.+++..||+.++.+ |+++ .++++|||+.....+|
T Consensus 271 ~~~~s~~~~~li~~~L~~~~~r~~R~~~--------~e~l~hp~~~~~~~~~ 314 (370)
T cd05621 271 DVEISKHAKNLICAFLTDREVRLGRNGV--------EEIKQHPFFKNDQWNW 314 (370)
T ss_pred cccCCHHHHHHHHHHccCchhccCCCCH--------HHHhcCcccCCCCcCh
Confidence 4457899999999999754443 6765 6677899998765555
No 58
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=2.6e-44 Score=312.18 Aligned_cols=250 Identities=30% Similarity=0.489 Sum_probs=206.3
Q ss_pred eeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHH-HHhcCCCCCeeeeeEEEEeCCeEEEEEeccCC
Q 022401 29 RDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREII-NHRSLRHPNIVRFKEVILTPTHLAIVMEYASG 103 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~~ 103 (298)
+.||+|+||.||++++..+++.||+|++.... .....+..|.. +++.++||||+++++++...+.+++|+||+.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 47999999999999999999999999987532 11223344443 56789999999999999999999999999999
Q ss_pred CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccC-CCCCCCCCC
Q 022401 104 GELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL-HSQPKSTVG 182 (298)
Q Consensus 104 ~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~-~~~~~~~~~ 182 (298)
++|...+.....+++..+..++.||+.||+|||++|++||||+|+||+++.++. ++|+|||++..... ........+
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~--~kl~Dfg~~~~~~~~~~~~~~~~g 158 (323)
T cd05575 81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGH--VVLTDFGLCKEGIEHSKTTSTFCG 158 (323)
T ss_pred CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCc--EEEeccCCCcccccCCCccccccC
Confidence 999999988888999999999999999999999999999999999999998887 99999998864322 222234458
Q ss_pred CCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhh
Q 022401 183 TPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIF 262 (298)
Q Consensus 183 ~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 262 (298)
++.|+|||++.+..++.+ +||||||+++|+|++|..||...+. ......+....... ...++.++.++|.+||
T Consensus 159 t~~y~aPE~~~~~~~~~~-~DvwslG~il~ell~g~~pf~~~~~----~~~~~~i~~~~~~~--~~~~~~~~~~li~~~l 231 (323)
T cd05575 159 TPEYLAPEVLRKQPYDRT-VDWWCLGAVLYEMLYGLPPFYSRDT----AEMYDNILNKPLRL--KPNISVSARHLLEGLL 231 (323)
T ss_pred ChhhcChhhhcCCCCCcc-ccccccchhhhhhhcCCCCCCCCCH----HHHHHHHHcCCCCC--CCCCCHHHHHHHHHHh
Confidence 899999999988777665 9999999999999999999987543 33344444444433 3347999999999999
Q ss_pred hhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 263 VADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 263 ~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
+.||.+||++.+.+ .++++|||+.+
T Consensus 232 ~~~p~~R~~~~~~~----~~il~~~~~~~ 256 (323)
T cd05575 232 QKDRTKRLGAKDDF----LEIKNHVFFSS 256 (323)
T ss_pred hcCHHhCCCCCCCH----HHHHcCCCcCC
Confidence 99999999987544 57889999864
No 59
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=2.8e-44 Score=323.50 Aligned_cols=259 Identities=25% Similarity=0.361 Sum_probs=202.8
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeC--------C
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTP--------T 92 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--------~ 92 (298)
...+|++++.||+|+||.||+|.+..+++.||+|++.... ....+|+.+++.++||||+++++++... .
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~---~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP---QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 4568999999999999999999999899999999886543 2345799999999999999999886432 2
Q ss_pred eEEEEEeccCCCCHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCcc
Q 022401 93 HLAIVMEYASGGELFERIC----NAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYS 168 (298)
Q Consensus 93 ~~~lv~~~~~~~sL~~~l~----~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~ 168 (298)
.+++|+||+++ ++.+.+. ....+++..++.++.|++.||+|||+.|++||||||+||+++.++. .+||+|||++
T Consensus 141 ~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~-~vkL~DFGla 218 (440)
T PTZ00036 141 FLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTH-TLKLCDFGSA 218 (440)
T ss_pred EEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCC-ceeeeccccc
Confidence 57799999975 6666553 3567899999999999999999999999999999999999986553 4999999999
Q ss_pred ccccCCCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhc--------
Q 022401 169 KSSVLHSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSV-------- 240 (298)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-------- 240 (298)
.............+++.|+|||++.+....+.++|||||||++|+|++|..||.+....+.+....+.+...
T Consensus 219 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~ 298 (440)
T PTZ00036 219 KNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEM 298 (440)
T ss_pred hhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHh
Confidence 765544444455678999999998765444445999999999999999999998876655544443322110
Q ss_pred -----CCCCC----------CCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 241 -----QYSVP----------DTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 241 -----~~~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
...++ .+...++++.+||.+||+.||.+|||+ .++++|||+.+.
T Consensus 299 ~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta--------~e~l~hp~f~~~ 357 (440)
T PTZ00036 299 NPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNP--------IEALADPFFDDL 357 (440)
T ss_pred chhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCH--------HHHhCChhHHhh
Confidence 00011 122367899999999999999999988 455577777643
No 60
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.1e-43 Score=309.30 Aligned_cols=258 Identities=26% Similarity=0.438 Sum_probs=208.2
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC--cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEe
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD--KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVME 99 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~ 99 (298)
.++|++.+.||+|+||.||++.+..++..+++|.+.... .....+.+|+.++++++||||+++++++..++.+++|+|
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 478999999999999999999999899999999887543 233568899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhc-CcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCCC
Q 022401 100 YASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM-QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK 178 (298)
Q Consensus 100 ~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~-~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~~ 178 (298)
|+.+++|.+++.....+++..+..++.+++.|+.|||+. +++|+||||+||+++.++. ++|+|||++...... ...
T Consensus 84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~--~kL~Dfg~~~~~~~~-~~~ 160 (333)
T cd06650 84 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE--IKLCDFGVSGQLIDS-MAN 160 (333)
T ss_pred cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCC--EEEeeCCcchhhhhh-ccc
Confidence 999999999998888899999999999999999999975 7999999999999998887 999999987643221 122
Q ss_pred CCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHH-------------------------
Q 022401 179 STVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKT------------------------- 233 (298)
Q Consensus 179 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~------------------------- 233 (298)
...++..|+|||.+.+..++.+ +|+|||||++|++++|..||........ ...
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~-~DvwslG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (333)
T cd06650 161 SFVGTRSYMSPERLQGTHYSVQ-SDIWSMGLSLVEMAIGRYPIPPPDAKEL-ELMFGCPVEGDPAESETSPRPRPPGRPL 238 (333)
T ss_pred cCCCCccccCHHHhcCCCCCcH-HHHHHHHHHHHHHHHCCCCCCCcchhHH-HHHhcCcccCCccccccCcccCCccchh
Confidence 3457889999999987776655 9999999999999999999976443111 110
Q ss_pred ----------------HHHHhhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 234 ----------------IQRILSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 234 ----------------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
...+.............+.++.+|+.+||+.||++|||+ .+++.|||+...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~--------~ell~h~~~~~~ 305 (333)
T cd06650 239 SSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADL--------KQLMVHAFIKRS 305 (333)
T ss_pred hhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCH--------HHHhhCHHHhcC
Confidence 011111111111112357899999999999999999987 455578888654
No 61
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.6e-45 Score=306.79 Aligned_cols=245 Identities=37% Similarity=0.644 Sum_probs=223.3
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcch----HHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEE
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKID----ENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
.+|++.+.||.|.+|.|-+|..+..|+.||||.+.++.-.. -.+.+|++|+..|.||||+.++++|+....+.+||
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM 132 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM 132 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence 47999999999999999999999999999999998764333 34779999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCCC
Q 022401 99 EYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK 178 (298)
Q Consensus 99 ~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~~ 178 (298)
||..+|.|.+++++.+.+++.+...+++||..|+.|+|+++++|+|||.+|||+|.+++ +||.|||++..........
T Consensus 133 EYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~N--iKIADFGLSNly~~~kfLq 210 (668)
T KOG0611|consen 133 EYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNN--IKIADFGLSNLYADKKFLQ 210 (668)
T ss_pred EecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCC--eeeeccchhhhhccccHHH
Confidence 99999999999999999999999999999999999999999999999999999999998 9999999987666667778
Q ss_pred CCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHH
Q 022401 179 STVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLI 258 (298)
Q Consensus 179 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (298)
+.+|++.|.+||+..+.+|.....|-||||+++|-++.|.+||.+.+. ..+++.+..+.+..|.. |.+..-||
T Consensus 211 TFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh----k~lvrQIs~GaYrEP~~---PSdA~gLI 283 (668)
T KOG0611|consen 211 TFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH----KRLVRQISRGAYREPET---PSDASGLI 283 (668)
T ss_pred HhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH----HHHHHHhhcccccCCCC---CchHHHHH
Confidence 889999999999999999998889999999999999999999999664 66777777777776654 77899999
Q ss_pred HHhhhhCCCCcccccccc
Q 022401 259 SRIFVADPAAVSIFFFPL 276 (298)
Q Consensus 259 ~~~l~~dp~~Rps~~~~l 276 (298)
++||-.||.+|.|+++|-
T Consensus 284 RwmLmVNP~RRATieDiA 301 (668)
T KOG0611|consen 284 RWMLMVNPERRATIEDIA 301 (668)
T ss_pred HHHHhcCcccchhHHHHh
Confidence 999999999999985444
No 62
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=2e-44 Score=319.24 Aligned_cols=256 Identities=30% Similarity=0.452 Sum_probs=208.6
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC----CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEE
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG----DKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
++|++++.||+|+||.||++++..+++.||+|++... ......+.+|+.++++++|+||+++++.+.+++.+++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 4799999999999999999999999999999998653 223356778999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC----
Q 022401 99 EYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH---- 174 (298)
Q Consensus 99 ~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~---- 174 (298)
||+++++|.+++...+.+++..+..++.|++.||+|||+.|++||||||+||+++.++. ++|+|||++......
T Consensus 81 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~--ikL~DFG~a~~~~~~~~~~ 158 (376)
T cd05598 81 DYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGH--IKLTDFGLCTGFRWTHDSK 158 (376)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCC--EEEEeCCCCcccccccccc
Confidence 99999999999988888999999999999999999999999999999999999998887 999999987421100
Q ss_pred ----------------------------------------CCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHH
Q 022401 175 ----------------------------------------SQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVM 214 (298)
Q Consensus 175 ----------------------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l 214 (298)
.......|++.|+|||++.+..++.+ +|||||||++|+|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwSlGvilyel 237 (376)
T cd05598 159 YYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQL-CDWWSVGVILYEM 237 (376)
T ss_pred ccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcc-eeeeeccceeeeh
Confidence 00012357889999999988777665 9999999999999
Q ss_pred HhCCCCCCCCCCchhHHHHHHHHhhc--CCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 215 LVGGYPFEDPDEPKDFRKTIQRILSV--QYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 215 ~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
++|..||......+.. ..+... ....+....++.++.++|.+|+ .+|.+|+... ...++++|||+..
T Consensus 238 l~G~~Pf~~~~~~~~~----~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~-----t~~ell~h~~~~~ 306 (376)
T cd05598 238 LVGQPPFLADTPAETQ----LKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKN-----GADEIKAHPFFKG 306 (376)
T ss_pred hhCCCCCCCCCHHHHH----HHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCC-----CHHHHhCCCCcCC
Confidence 9999999876543322 222222 2233334457899999999987 5999999321 2366667888764
No 63
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=2.9e-44 Score=318.83 Aligned_cols=256 Identities=31% Similarity=0.461 Sum_probs=209.9
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEE
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
+.|++++.||+|+||.||++++..+++.+|+|++.... .....+.+|+.++++++||||+++++++.++..+++|+
T Consensus 1 ~~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (382)
T cd05625 1 SMFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 80 (382)
T ss_pred CCcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEE
Confidence 36999999999999999999999999999999987532 23356778999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC----
Q 022401 99 EYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH---- 174 (298)
Q Consensus 99 ~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~---- 174 (298)
||+++++|.+++.....+++..+..++.|++.||+|||+.|++||||||+||+++.++. ++|+|||++......
T Consensus 81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~--~kL~DFGla~~~~~~~~~~ 158 (382)
T cd05625 81 DYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGH--IKLTDFGLCTGFRWTHDSK 158 (382)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCC--EEEeECCCCcccccccccc
Confidence 99999999999988888999999999999999999999999999999999999998887 999999986421100
Q ss_pred --------------------------------------------CCCCCCCCCCcccCccccccccCCCCccchHHHHHH
Q 022401 175 --------------------------------------------SQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVT 210 (298)
Q Consensus 175 --------------------------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~l 210 (298)
.......|++.|+|||++.+..++.+ +||||+||+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~-~DiwSlGvi 237 (382)
T cd05625 159 YYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQL-CDWWSVGVI 237 (382)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCe-eeEEechHH
Confidence 00012347889999999988887765 999999999
Q ss_pred HHHHHhCCCCCCCCCCchhHHHHHHHHhhc--CCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhh
Q 022401 211 LYVMLVGGYPFEDPDEPKDFRKTIQRILSV--QYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVW 288 (298)
Q Consensus 211 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~ 288 (298)
+|+|++|..||...+..+ ...++... ....+....+++++.++|.+|+ .||.+|++. ....++++|||
T Consensus 238 l~elltG~~Pf~~~~~~~----~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~-----~~~~ei~~hp~ 307 (382)
T cd05625 238 LYEMLVGQPPFLAQTPLE----TQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGK-----NGADEIKAHPF 307 (382)
T ss_pred HHHHHhCCCCCCCCCHHH----HHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCC-----CCHHHHhcCCC
Confidence 999999999998765432 22233332 2233444557999999999987 599999972 12467778998
Q ss_pred hhh
Q 022401 289 MFD 291 (298)
Q Consensus 289 ~~~ 291 (298)
+.+
T Consensus 308 f~~ 310 (382)
T cd05625 308 FKT 310 (382)
T ss_pred cCC
Confidence 864
No 64
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.1e-43 Score=314.94 Aligned_cols=260 Identities=21% Similarity=0.298 Sum_probs=204.7
Q ss_pred CCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEe
Q 022401 20 HDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVME 99 (298)
Q Consensus 20 ~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~ 99 (298)
...++|++++.||+|+||.||++.+..+++.||+|.... ..+.+|+.++++++||||+++++++..+...+++++
T Consensus 89 ~~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~-----~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e 163 (391)
T PHA03212 89 IEKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR-----GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILP 163 (391)
T ss_pred cccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh-----hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEe
Confidence 345689999999999999999999999999999996432 356789999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC--CCC
Q 022401 100 YASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH--SQP 177 (298)
Q Consensus 100 ~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~--~~~ 177 (298)
++. ++|...+.....++..+++.++.|++.||+|||+.|++||||||+||+++.++. ++|+|||++...... ...
T Consensus 164 ~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~--vkL~DFG~a~~~~~~~~~~~ 240 (391)
T PHA03212 164 RYK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGD--VCLGDFGAACFPVDINANKY 240 (391)
T ss_pred cCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCC--EEEEeCCccccccccccccc
Confidence 995 588888877788999999999999999999999999999999999999998887 999999998632221 122
Q ss_pred CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCC-------chhHHHHHHHH-------------
Q 022401 178 KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDE-------PKDFRKTIQRI------------- 237 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~-------~~~~~~~~~~~------------- 237 (298)
....+++.|+|||++.+..++.+ +||||||+++|+|++|..||-.... ...+.......
T Consensus 241 ~~~~gt~~y~aPE~~~~~~~~~~-~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~ 319 (391)
T PHA03212 241 YGWAGTIATNAPELLARDPYGPA-VDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQA 319 (391)
T ss_pred ccccCccCCCChhhhcCCCCCcH-HHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhH
Confidence 23468899999999987777655 9999999999999999987644221 11111111111
Q ss_pred ---------hhcCCCCCC-------CCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhhhhhc
Q 022401 238 ---------LSVQYSVPD-------TNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDATENY 296 (298)
Q Consensus 238 ---------~~~~~~~~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~~~~~ 296 (298)
.......+. ...++.++.++|.+||+.||.+|||+ .++++|||+++...-|
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta--------~elL~hp~f~~~~~~~ 386 (391)
T PHA03212 320 NLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSA--------EALLDFAAFQDIPDPY 386 (391)
T ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCH--------HHHhcChhhccCCCCC
Confidence 000000000 11246789999999999999999988 4555788888755444
No 65
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.1e-43 Score=306.43 Aligned_cols=265 Identities=23% Similarity=0.377 Sum_probs=209.6
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC--cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEE
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD--KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
..++|++.+.||+|+||.||++++..+++.+|+|.+.... .....+.+|+.++++++|||++++++++..+...++|+
T Consensus 4 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 83 (309)
T cd07872 4 KMETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVF 83 (309)
T ss_pred CCCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEE
Confidence 3478999999999999999999999899999999987542 22345778999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC-C
Q 022401 99 EYASGGELFERICNA-GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-Q 176 (298)
Q Consensus 99 ~~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~-~ 176 (298)
||+++ +|.+.+... ..++...+..++.|++.||+|||++|++||||+|+||+++.++. ++|+|||++....... .
T Consensus 84 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~--~kl~Dfg~~~~~~~~~~~ 160 (309)
T cd07872 84 EYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGE--LKLADFGLARAKSVPTKT 160 (309)
T ss_pred eCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCC--EEECccccceecCCCccc
Confidence 99975 777777554 45889999999999999999999999999999999999998887 9999999886433222 2
Q ss_pred CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcC---------------
Q 022401 177 PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQ--------------- 241 (298)
Q Consensus 177 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~--------------- 241 (298)
.....+++.|+|||.+.+......++||||+|+++|+|++|..||...+..+.+......+....
T Consensus 161 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
T cd07872 161 YSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKN 240 (309)
T ss_pred cccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhh
Confidence 23345688999999987655445559999999999999999999987665444333322111000
Q ss_pred CCC---------CCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhhhhhc
Q 022401 242 YSV---------PDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDATENY 296 (298)
Q Consensus 242 ~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~~~~~ 296 (298)
... .....+++++.++|.+||+.||.+|||+ .++++|||+.+...-+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~--------~e~l~h~~~~~~~~~~ 296 (309)
T cd07872 241 YNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISA--------EEAMKHAYFRSLGTRI 296 (309)
T ss_pred hhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCH--------HHHhcChhhhhccccc
Confidence 000 1112468899999999999999999987 5555788888655433
No 66
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=2.1e-44 Score=312.98 Aligned_cols=251 Identities=33% Similarity=0.514 Sum_probs=206.2
Q ss_pred eeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEeccCCC
Q 022401 29 RDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGG 104 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~~~ 104 (298)
+.||+|+||.||++++..+++.||+|++.... .....+.+|+.+++.++||||+++++++..+..+++||||++++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999999999999999987532 22345678899999999999999999999999999999999999
Q ss_pred CHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhh-cCcEEecCCCCceEeeCCCCCCEEEeecCccccccC-CCCCCCCCC
Q 022401 105 ELFERICNAGRFSEDEARFFFQQLISGVSYCHA-MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL-HSQPKSTVG 182 (298)
Q Consensus 105 sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~-~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~-~~~~~~~~~ 182 (298)
+|...+.....+++..+..++.|++.||+|||+ .|++|+||||+||+++.++. ++|+|||++..... ........+
T Consensus 81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~--~kL~Dfg~~~~~~~~~~~~~~~~g 158 (325)
T cd05594 81 ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGH--IKITDFGLCKEGIKDGATMKTFCG 158 (325)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCC--EEEecCCCCeecCCCCcccccccC
Confidence 999999888889999999999999999999997 79999999999999998887 99999998764322 222234458
Q ss_pred CCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhh
Q 022401 183 TPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIF 262 (298)
Q Consensus 183 ~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 262 (298)
++.|+|||++.+..++.+ +||||||+++|+|++|..||...+.. .....+.......+ ..+++++.++|.+||
T Consensus 159 t~~y~aPE~~~~~~~~~~-~DiwslG~il~el~tG~~Pf~~~~~~----~~~~~i~~~~~~~p--~~~~~~~~~li~~~L 231 (325)
T cd05594 159 TPEYLAPEVLEDNDYGRA-VDWWGLGVVMYEMMCGRLPFYNQDHE----KLFELILMEEIRFP--RTLSPEAKSLLSGLL 231 (325)
T ss_pred CcccCCHHHHccCCCCCc-cccccccceeeeeccCCCCCCCCCHH----HHHHHHhcCCCCCC--CCCCHHHHHHHHHHh
Confidence 899999999987777665 99999999999999999999875542 33333444444433 347899999999999
Q ss_pred hhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 263 VADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 263 ~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
+.||.+|++.... ...++++|||+.+
T Consensus 232 ~~dP~~R~~~~~~---~~~~il~h~~~~~ 257 (325)
T cd05594 232 KKDPKQRLGGGPD---DAKEIMQHKFFAG 257 (325)
T ss_pred hcCHHHhCCCCCC---CHHHHhcCCCcCC
Confidence 9999999732211 1366668888864
No 67
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=6.5e-44 Score=309.63 Aligned_cols=252 Identities=29% Similarity=0.459 Sum_probs=208.1
Q ss_pred EeeeccCCeEEEEEEEEc---cCCcEEEEEEeecCC-----cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEe
Q 022401 28 VRDIGSGNFGVARLMRDK---VTKELVAVKYIERGD-----KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVME 99 (298)
Q Consensus 28 ~~~lg~g~~~~vy~~~~~---~~~~~~aiK~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~ 99 (298)
++.||+|+||.||.+++. .+++.||+|++.... .....+.+|+.++++++||||+++++++..++.+|+|+|
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEe
Confidence 368999999999999874 468899999987532 223456789999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC-CCCC
Q 022401 100 YASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH-SQPK 178 (298)
Q Consensus 100 ~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~-~~~~ 178 (298)
|+.+++|.+.+.....+++..+..++.|++.||+|||+.|++|+||||+||+++.++. ++|+|||++...... ....
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~~~~ 158 (323)
T cd05584 81 YLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGH--VKLTDFGLCKESIHEGTVTH 158 (323)
T ss_pred CCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCC--EEEeeCcCCeecccCCCccc
Confidence 9999999999988888999999999999999999999999999999999999998887 999999987633222 2223
Q ss_pred CCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHH
Q 022401 179 STVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLI 258 (298)
Q Consensus 179 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (298)
...+++.|+|||++.+..++.+ +||||||+++|+|++|..||...+.. .....+....... +..+++++.++|
T Consensus 159 ~~~gt~~y~aPE~~~~~~~~~~-~DiwslG~il~ell~G~~pf~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~~li 231 (323)
T cd05584 159 TFCGTIEYMAPEILMRSGHGKA-VDWWSLGALMYDMLTGAPPFTAENRK----KTIDKILKGKLNL--PPYLTPEARDLL 231 (323)
T ss_pred ccCCCccccChhhccCCCCCCc-ceecccHHHHHHHhcCCCCCCCCCHH----HHHHHHHcCCCCC--CCCCCHHHHHHH
Confidence 3458899999999987777655 99999999999999999999876542 3344444444433 334789999999
Q ss_pred HHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 259 SRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 259 ~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
.+||+.||.+||+.... ...++++|||+..
T Consensus 232 ~~~l~~~p~~R~~~~~~---~~~~l~~h~~~~~ 261 (323)
T cd05584 232 KKLLKRNPSSRLGAGPG---DAAEVQSHPFFRH 261 (323)
T ss_pred HHHcccCHhHcCCCCCC---CHHHHhcCCCcCC
Confidence 99999999999954332 3477888999864
No 68
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=7e-44 Score=311.30 Aligned_cols=258 Identities=28% Similarity=0.407 Sum_probs=201.6
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC---CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeC-----CeEE
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG---DKIDENVQREIINHRSLRHPNIVRFKEVILTP-----THLA 95 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 95 (298)
+|++.+.||+|+||.||++++..++..||+|.+... ......+.+|+.++++++||||+++++++... ..+|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 699999999999999999999999999999988643 22234578899999999999999999988643 3589
Q ss_pred EEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC
Q 022401 96 IVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS 175 (298)
Q Consensus 96 lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~ 175 (298)
+|+||+. ++|.+.+.....+++..+..++.|++.||.|||++|++|+||||+||+++.++. ++|+|||++.......
T Consensus 81 lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~--~kL~Dfg~~~~~~~~~ 157 (338)
T cd07859 81 VVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCK--LKICDFGLARVAFNDT 157 (338)
T ss_pred EEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCc--EEEccCcccccccccc
Confidence 9999995 589999988888999999999999999999999999999999999999998887 9999999986432221
Q ss_pred C----CCCCCCCCcccCcccccc--ccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHH-----------HHh
Q 022401 176 Q----PKSTVGTPAYIAPEVLLR--HEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQ-----------RIL 238 (298)
Q Consensus 176 ~----~~~~~~~~~~~aPE~~~~--~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~-----------~~~ 238 (298)
. .....+++.|+|||.+.+ ..++. ++||||||+++|+|++|..||...+....+..... .+.
T Consensus 158 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~-~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 236 (338)
T cd07859 158 PTAIFWTDYVATRWYRAPELCGSFFSKYTP-AIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVR 236 (338)
T ss_pred CccccccCCCCCCCcCCHHHHhccccccCc-hhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhh
Confidence 1 123457889999998765 34444 49999999999999999999977554222111100 000
Q ss_pred -----------hcCCCC---CCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhhh
Q 022401 239 -----------SVQYSV---PDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDAT 293 (298)
Q Consensus 239 -----------~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~~ 293 (298)
...... .....+++++.+++.+||+.||++|||+ .++++|||+.+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~--------~e~l~hp~f~~~~ 297 (338)
T cd07859 237 NEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTA--------EEALADPYFKGLA 297 (338)
T ss_pred hhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCH--------HHHhcCchhhhcC
Confidence 000000 0112367889999999999999999987 5555788886543
No 69
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=2.2e-43 Score=301.11 Aligned_cols=262 Identities=24% Similarity=0.332 Sum_probs=216.8
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEe
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVME 99 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~ 99 (298)
.|+..+.||+|+||.||.+.+..+++.+|+|.+.... .....+.+|+.++++++|+|++++.+++..++..++++|
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence 4889999999999999999999999999999987542 222446789999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCC
Q 022401 100 YASGGELFERICNA--GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP 177 (298)
Q Consensus 100 ~~~~~sL~~~l~~~--~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~ 177 (298)
|+.+++|...+... ..+++..+..++.|++.||.|||+.|++|+||+|+||+++.++. ++|+|||++.........
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~--~kl~Dfg~~~~~~~~~~~ 158 (285)
T cd05632 81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGH--IRISDLGLAVKIPEGESI 158 (285)
T ss_pred eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCC--EEEecCCcceecCCCCcc
Confidence 99999998888543 36899999999999999999999999999999999999988876 999999988654433333
Q ss_pred CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHH
Q 022401 178 KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDL 257 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (298)
....++..|+|||.+.+..++.+ +|+||+|+++|++++|..||...............+....... ...++.++.+|
T Consensus 159 ~~~~g~~~~~aPE~~~~~~~~~~-~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l 235 (285)
T cd05632 159 RGRVGTVGYMAPEVLNNQRYTLS-PDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVY--SAKFSEEAKSI 235 (285)
T ss_pred cCCCCCcCccChHHhcCCCCCcc-cchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcccccc--CccCCHHHHHH
Confidence 44568899999999987777665 9999999999999999999987654333333333333333222 33478999999
Q ss_pred HHHhhhhCCCCcccccccchhhhHHHhhhhhhhhhh
Q 022401 258 ISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDAT 293 (298)
Q Consensus 258 i~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~~ 293 (298)
+..||+.||++||++.+.. ..+++.|||+.+..
T Consensus 236 i~~~l~~~P~~R~~~~~~~---~~~l~~~~~~~~~~ 268 (285)
T cd05632 236 CKMLLTKDPKQRLGCQEEG---AGEVKRHPFFRNMN 268 (285)
T ss_pred HHHHccCCHhHcCCCcccC---hHHHHcChhhhcCC
Confidence 9999999999999975443 58889999998753
No 70
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.3e-43 Score=307.83 Aligned_cols=256 Identities=30% Similarity=0.460 Sum_probs=211.8
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhcC-CCCCeeeeeEEEEeCCeEEEEE
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRSL-RHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
+|++.+.||+|+||.||++++..+++.+|+|++.+.. .....+..|..++..+ +|++++++++++...+.+++|+
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 5899999999999999999999899999999987542 1223455677777766 5799999999999999999999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccC-CCCC
Q 022401 99 EYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL-HSQP 177 (298)
Q Consensus 99 ~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~-~~~~ 177 (298)
||+++++|...+.....+++..+..++.|++.||+|||+.|++||||||+||+++.++. ++|+|||++..... ....
T Consensus 81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~--~kL~DfG~~~~~~~~~~~~ 158 (323)
T cd05616 81 EYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGH--IKIADFGMCKENMWDGVTT 158 (323)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCc--EEEccCCCceecCCCCCcc
Confidence 99999999999988888999999999999999999999999999999999999998887 99999998864322 2222
Q ss_pred CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHH
Q 022401 178 KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDL 257 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (298)
....+++.|+|||++.+..++.+ +|||||||++|+|++|..||...+. ......+.......+ ..++.++.++
T Consensus 159 ~~~~gt~~y~aPE~~~~~~~~~~-~DiwSlGvil~elltg~~Pf~~~~~----~~~~~~i~~~~~~~p--~~~s~~~~~l 231 (323)
T cd05616 159 KTFCGTPDYIAPEIIAYQPYGKS-VDWWAFGVLLYEMLAGQAPFEGEDE----DELFQSIMEHNVAYP--KSMSKEAVAI 231 (323)
T ss_pred ccCCCChhhcCHHHhcCCCCCCc-cchhchhHHHHHHHhCCCCCCCCCH----HHHHHHHHhCCCCCC--CcCCHHHHHH
Confidence 34568899999999988777665 9999999999999999999987654 333444444444443 3479999999
Q ss_pred HHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 258 ISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 258 i~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
+.+||+.||.+|++..... ..++.+|||+..
T Consensus 232 i~~~l~~~p~~R~~~~~~~---~~~i~~h~~~~~ 262 (323)
T cd05616 232 CKGLMTKHPGKRLGCGPEG---ERDIKEHAFFRY 262 (323)
T ss_pred HHHHcccCHHhcCCCCCCC---HHHHhcCCCcCC
Confidence 9999999999999864332 356778888764
No 71
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.5e-44 Score=312.97 Aligned_cols=253 Identities=29% Similarity=0.464 Sum_probs=210.2
Q ss_pred EeeeccCCeEEEEEEEEc---cCCcEEEEEEeecCC---cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEecc
Q 022401 28 VRDIGSGNFGVARLMRDK---VTKELVAVKYIERGD---KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYA 101 (298)
Q Consensus 28 ~~~lg~g~~~~vy~~~~~---~~~~~~aiK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~ 101 (298)
++.||+|+||.||++++. .+|+.+|+|++.... .....+.+|+.++++++||||+++++++..+..+|+|+||+
T Consensus 1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 80 (318)
T cd05582 1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFL 80 (318)
T ss_pred CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCC
Confidence 367999999999999873 578899999987532 22345678999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC-CCCCCC
Q 022401 102 SGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH-SQPKST 180 (298)
Q Consensus 102 ~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~-~~~~~~ 180 (298)
.+++|.+.+.....+++..++.++.|++.||+|||+.|++|+||+|+||+++.++. ++|+|||++...... ......
T Consensus 81 ~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~--~kL~Dfg~~~~~~~~~~~~~~~ 158 (318)
T cd05582 81 RGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGH--IKLTDFGLSKESIDHEKKAYSF 158 (318)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCc--EEEeeccCCcccCCCCCceecc
Confidence 99999999988888999999999999999999999999999999999999998887 999999988644332 222344
Q ss_pred CCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHH
Q 022401 181 VGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISR 260 (298)
Q Consensus 181 ~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 260 (298)
.+++.|+|||.+.+..++.+ +||||||+++|+|++|..||...+. ......+....... +..+++++.++|++
T Consensus 159 ~g~~~y~aPE~~~~~~~~~~-~DiwslG~il~el~tg~~p~~~~~~----~~~~~~i~~~~~~~--p~~~~~~~~~li~~ 231 (318)
T cd05582 159 CGTVEYMAPEVVNRRGHTQS-ADWWSFGVLMFEMLTGSLPFQGKDR----KETMTMILKAKLGM--PQFLSPEAQSLLRA 231 (318)
T ss_pred cCChhhcCHHHHcCCCCCCc-cceeccceEeeeeccCCCCCCCCCH----HHHHHHHHcCCCCC--CCCCCHHHHHHHHH
Confidence 57889999999887777655 9999999999999999999987543 23333444444333 33478999999999
Q ss_pred hhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 261 IFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 261 ~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
||+.||.+||++.+.+ ..+++.|||+...
T Consensus 232 ~l~~~P~~R~~a~~~~---~~~~~~~~~~~~~ 260 (318)
T cd05582 232 LFKRNPANRLGAGPDG---VEEIKRHPFFSTI 260 (318)
T ss_pred HhhcCHhHcCCCCCCC---HHHHhCCCCcCCC
Confidence 9999999999987654 4778899998653
No 72
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=6.2e-44 Score=309.56 Aligned_cols=253 Identities=28% Similarity=0.433 Sum_probs=208.6
Q ss_pred eeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhcC-CCCCeeeeeEEEEeCCeEEEEEeccCC
Q 022401 29 RDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRSL-RHPNIVRFKEVILTPTHLAIVMEYASG 103 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~~~~~~ 103 (298)
+.||+|+||.||++++..+++.||+|++.... .....+..|..++..+ +||||+++++++..++.+|+|+||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999999899999999987532 2234466788888765 799999999999999999999999999
Q ss_pred CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC-CCCCCCCC
Q 022401 104 GELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH-SQPKSTVG 182 (298)
Q Consensus 104 ~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~-~~~~~~~~ 182 (298)
++|...+.....+++..+..++.|++.||.|||+.|++||||||+||+++.++. ++|+|||++...... .......+
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~--~kL~Dfg~~~~~~~~~~~~~~~~g 158 (321)
T cd05591 81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGH--CKLADFGMCKEGILNGVTTTTFCG 158 (321)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCC--EEEeecccceecccCCcccccccc
Confidence 999999988888999999999999999999999999999999999999998887 999999988643222 22233457
Q ss_pred CCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhh
Q 022401 183 TPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIF 262 (298)
Q Consensus 183 ~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 262 (298)
++.|+|||.+.+..++.+ +||||+|+++|+|++|..||...+. ......+.......+ ..++.++.+++.+||
T Consensus 159 t~~y~aPE~~~~~~~~~~-~DvwslG~il~el~tg~~Pf~~~~~----~~~~~~i~~~~~~~p--~~~~~~~~~ll~~~L 231 (321)
T cd05591 159 TPDYIAPEILQELEYGPS-VDWWALGVLMYEMMAGQPPFEADNE----DDLFESILHDDVLYP--VWLSKEAVSILKAFM 231 (321)
T ss_pred CccccCHHHHcCCCCCCc-cceechhHHHHHHhcCCCCCCCCCH----HHHHHHHHcCCCCCC--CCCCHHHHHHHHHHh
Confidence 899999999987777666 9999999999999999999987654 333444555444333 337899999999999
Q ss_pred hhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 263 VADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 263 ~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
+.||.+||+..+.. ....++++|||+.+
T Consensus 232 ~~dp~~R~~~~~~~-~~~~~~~~hp~~~~ 259 (321)
T cd05591 232 TKNPNKRLGCVASQ-GGEDAIKQHPFFKE 259 (321)
T ss_pred ccCHHHcCCCCCCC-CCHHHHhcCCccCC
Confidence 99999999654432 14577789999864
No 73
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.2e-44 Score=300.07 Aligned_cols=263 Identities=27% Similarity=0.420 Sum_probs=223.5
Q ss_pred CCCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCe
Q 022401 18 IMHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRSLRHPNIVRFKEVILTPTH 93 (298)
Q Consensus 18 ~~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 93 (298)
+.+..+.|++++.||.|.-|.||+++.+.++..+|+|++.+.. +...+...|.+||..++||.+.+++..++.++.
T Consensus 72 ~~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~ 151 (459)
T KOG0610|consen 72 GSLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKY 151 (459)
T ss_pred CccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccce
Confidence 4556678999999999999999999999999999999998753 233456679999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccc
Q 022401 94 LAIVMEYASGGELFERICNAG--RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSS 171 (298)
Q Consensus 94 ~~lv~~~~~~~sL~~~l~~~~--~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~ 171 (298)
.|++||||+||+|..+++.++ .+++..++.++..++.||+|||..|||+|||||+||||.++|+ +.|+||+++...
T Consensus 152 ~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGH--IMLsDFDLS~~~ 229 (459)
T KOG0610|consen 152 SCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGH--IMLSDFDLSLRC 229 (459)
T ss_pred eEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCc--EEeeeccccccC
Confidence 999999999999999887655 5999999999999999999999999999999999999999999 999999987421
Q ss_pred cC--------------------------------CCCC-------------------------CCCCCCCcccCcccccc
Q 022401 172 VL--------------------------------HSQP-------------------------KSTVGTPAYIAPEVLLR 194 (298)
Q Consensus 172 ~~--------------------------------~~~~-------------------------~~~~~~~~~~aPE~~~~ 194 (298)
.. .... ....||-+|+|||++.+
T Consensus 230 ~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G 309 (459)
T KOG0610|consen 230 PVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRG 309 (459)
T ss_pred CCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeec
Confidence 10 0000 00125668999999999
Q ss_pred ccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccc
Q 022401 195 HEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFF 274 (298)
Q Consensus 195 ~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ 274 (298)
.+.... .|.|+||+++|||+.|..||.+.+. .+....+...+...+....++.++++||+++|.+||.+|....
T Consensus 310 ~GHgsA-VDWWtfGIflYEmLyG~TPFKG~~~----~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~- 383 (459)
T KOG0610|consen 310 EGHGSA-VDWWTFGIFLYEMLYGTTPFKGSNN----KETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSK- 383 (459)
T ss_pred CCCCch-hhHHHHHHHHHHHHhCCCCcCCCCc----hhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccc-
Confidence 988666 9999999999999999999999887 4555666777777787777899999999999999999999741
Q ss_pred cchhhhHHHhhhhhhhh
Q 022401 275 PLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 275 ~l~~~~~~~~~hp~~~~ 291 (298)
+=..++-+|||+.+
T Consensus 384 ---rGA~eIK~HpFF~g 397 (459)
T KOG0610|consen 384 ---RGAAEIKRHPFFEG 397 (459)
T ss_pred ---cchHHhhcCccccC
Confidence 12367778999865
No 74
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=7.1e-44 Score=308.77 Aligned_cols=252 Identities=33% Similarity=0.506 Sum_probs=209.6
Q ss_pred eeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhcC-CCCCeeeeeEEEEeCCeEEEEEeccCC
Q 022401 29 RDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRSL-RHPNIVRFKEVILTPTHLAIVMEYASG 103 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~~~~~~ 103 (298)
+.||+|+||.||++.+..++..||+|++.... .....+..|..+++.+ +||||+++++++...+.+++|+||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 47999999999999999899999999987532 2334566788888877 699999999999999999999999999
Q ss_pred CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccC-CCCCCCCCC
Q 022401 104 GELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL-HSQPKSTVG 182 (298)
Q Consensus 104 ~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~-~~~~~~~~~ 182 (298)
++|...+.....+++..+..++.|++.||.|||+.|++|+||+|+||+++.++. ++|+|||++..... ........+
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~--~kl~Dfg~~~~~~~~~~~~~~~~g 158 (318)
T cd05570 81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGH--IKIADFGMCKEGILGGVTTSTFCG 158 (318)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCc--EEecccCCCeecCcCCCcccceec
Confidence 999999988888999999999999999999999999999999999999998887 99999998763222 222233457
Q ss_pred CCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhh
Q 022401 183 TPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIF 262 (298)
Q Consensus 183 ~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 262 (298)
++.|+|||.+.+..++.+ +|+||||+++|+|++|..||...+. ......+.......+ ..++.++.++|.+||
T Consensus 159 ~~~y~aPE~~~~~~~~~~-~DiwslGvil~~l~~G~~pf~~~~~----~~~~~~i~~~~~~~~--~~~~~~~~~li~~~l 231 (318)
T cd05570 159 TPDYIAPEILSYQPYGPA-VDWWALGVLLYEMLAGQSPFEGDDE----DELFQSILEDEVRYP--RWLSKEAKSILKSFL 231 (318)
T ss_pred CccccCHHHhcCCCCCcc-hhhhhHHHHHHHHhhCCCCCCCCCH----HHHHHHHHcCCCCCC--CcCCHHHHHHHHHHc
Confidence 889999999988777665 9999999999999999999987553 233344444444333 347999999999999
Q ss_pred hhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 263 VADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 263 ~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
..||.+|||+.+. ...+++.|||+.+.
T Consensus 232 ~~dP~~R~s~~~~---~~~~ll~~~~~~~~ 258 (318)
T cd05570 232 TKNPEKRLGCLPT---GEQDIKGHPFFREI 258 (318)
T ss_pred cCCHHHcCCCCCC---CHHHHhcCCCcCCC
Confidence 9999999998552 34778899998753
No 75
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=4.1e-44 Score=315.40 Aligned_cols=257 Identities=27% Similarity=0.452 Sum_probs=212.6
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC----CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEE
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG----DKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
++|++.+.||+|+||.||++++..+++.||+|++... ......+.+|+.++..++||+++++++.+.+++.+++|+
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 4799999999999999999999999999999998742 233456778999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC---
Q 022401 99 EYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS--- 175 (298)
Q Consensus 99 ~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~--- 175 (298)
||+++++|.+++.+...+++..+..++.|++.||+|||+.|++||||||+||+++.++. ++|+|||++.......
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~--vkL~DfG~~~~~~~~~~~~ 158 (360)
T cd05627 81 EFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGH--VKLSDFGLCTGLKKAHRTE 158 (360)
T ss_pred eCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCC--EEEeeccCCcccccccccc
Confidence 99999999999988888999999999999999999999999999999999999998887 9999999875322110
Q ss_pred ---------------------------------CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCC
Q 022401 176 ---------------------------------QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFE 222 (298)
Q Consensus 176 ---------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~ 222 (298)
......|++.|+|||++.+..++.+ +|||||||++|+|++|..||.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~-~DiwSlGvilyel~tG~~Pf~ 237 (360)
T cd05627 159 FYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKL-CDWWSLGVIMYEMLIGYPPFC 237 (360)
T ss_pred cccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCc-ceeccccceeeecccCCCCCC
Confidence 0012357889999999988887765 999999999999999999998
Q ss_pred CCCCchhHHHHHHHHhhcC--CCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 223 DPDEPKDFRKTIQRILSVQ--YSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
...... ...++.... ...+....+++++.++|.+|+ .||.+|++. ....++++|||+.+.
T Consensus 238 ~~~~~~----~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~-----~~~~ei~~hp~f~~~ 299 (360)
T cd05627 238 SETPQE----TYRKVMNWKETLVFPPEVPISEKAKDLILRFC-TDSENRIGS-----NGVEEIKSHPFFEGV 299 (360)
T ss_pred CCCHHH----HHHHHHcCCCceecCCCCCCCHHHHHHHHHhc-cChhhcCCC-----CCHHHHhcCCCCCCC
Confidence 765432 233333322 223333347899999999987 499999974 235788899999864
No 76
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=4.1e-43 Score=295.73 Aligned_cols=252 Identities=29% Similarity=0.430 Sum_probs=209.1
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc------chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEE
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK------IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAI 96 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 96 (298)
+.|++.+.||+|++|.||.+.+..++..+++|.+..... ....+.+|+.++++++||||+++++++..+...++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 469999999999999999999988899999998875422 22457789999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCC
Q 022401 97 VMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ 176 (298)
Q Consensus 97 v~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~ 176 (298)
++|++++++|.+.+.....+++..+..++.+++.|+.+||+.|++|+||+|+||+++.++. ++|+|||++........
T Consensus 82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~--~~l~dfg~~~~~~~~~~ 159 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGN--VKLGDFGASKRLQTICS 159 (263)
T ss_pred EEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC--EEEeecccceecccccc
Confidence 9999999999999988888999999999999999999999999999999999999998877 99999998864432211
Q ss_pred C----CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCH
Q 022401 177 P----KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQ 252 (298)
Q Consensus 177 ~----~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (298)
. ....++..|+|||.+.+..++.+ +||||+|+++|++++|..||...+... ...+..........+..++.
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~el~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 234 (263)
T cd06625 160 SGTGMKSVTGTPYWMSPEVISGEGYGRK-ADVWSVGCTVVEMLTEKPPWAEFEAMA----AIFKIATQPTNPQLPSHVSP 234 (263)
T ss_pred ccccccCCCcCccccCcceeccCCCCch-hhhHHHHHHHHHHHhCCCCccccchHH----HHHHHhccCCCCCCCccCCH
Confidence 1 22346778999999988776555 999999999999999999998754422 22223333333334445789
Q ss_pred HHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 253 ECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 253 ~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
++.+++.+||..||.+|||+ .++++|||+
T Consensus 235 ~~~~li~~~l~~~p~~Rpt~--------~~ll~~~~~ 263 (263)
T cd06625 235 DARNFLRRTFVENAKKRPSA--------EELLRHFFV 263 (263)
T ss_pred HHHHHHHHHhhcCcccCCCH--------HHHhhCCCC
Confidence 99999999999999999987 555577775
No 77
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.6e-43 Score=307.18 Aligned_cols=257 Identities=29% Similarity=0.458 Sum_probs=213.2
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhcCC-CCCeeeeeEEEEeCCeEEEEE
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRSLR-HPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 98 (298)
+|++.+.||+|+||.||+|++..+++.||+|++.... .....+..|..++..+. |++++++.+++...+.+++|+
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4889999999999999999999999999999987532 22344667888888775 577888999999999999999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC-CCC
Q 022401 99 EYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH-SQP 177 (298)
Q Consensus 99 ~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~-~~~ 177 (298)
||+++++|.+.+.....+++.++..++.|++.||+|||++|++|+||||+||+++.++. ++|+|||++...... ...
T Consensus 81 Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~--ikL~Dfg~~~~~~~~~~~~ 158 (323)
T cd05615 81 EYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGH--IKIADFGMCKEHMVDGVTT 158 (323)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCC--EEEeccccccccCCCCccc
Confidence 99999999999988888999999999999999999999999999999999999998887 999999988643222 222
Q ss_pred CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHH
Q 022401 178 KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDL 257 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (298)
....+++.|+|||++.+..++.+ +|+||+|+++|+|++|..||..... ......+.......+ ..++.++.++
T Consensus 159 ~~~~gt~~y~aPE~~~~~~~~~~-~DiwslGvil~elltG~~pf~~~~~----~~~~~~i~~~~~~~p--~~~~~~~~~l 231 (323)
T cd05615 159 RTFCGTPDYIAPEIIAYQPYGKS-VDWWAYGVLLYEMLAGQPPFDGEDE----DELFQSIMEHNVSYP--KSLSKEAVSI 231 (323)
T ss_pred cCccCCccccCHHHHcCCCCCCc-cchhhhHHHHHHHHhCCCCCCCCCH----HHHHHHHHhCCCCCC--ccCCHHHHHH
Confidence 34457899999999987777655 9999999999999999999987654 233444444444433 3478999999
Q ss_pred HHHhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 258 ISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 258 i~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
+.+||+.||.+|++..+.. ..++.+|||+...
T Consensus 232 i~~~l~~~p~~R~~~~~~~---~~~i~~h~~f~~~ 263 (323)
T cd05615 232 CKGLMTKHPSKRLGCGPEG---ERDIREHAFFRRI 263 (323)
T ss_pred HHHHcccCHhhCCCCCCCC---HHHHhcCcccCCC
Confidence 9999999999999876543 3677899998753
No 78
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.6e-43 Score=302.54 Aligned_cols=255 Identities=27% Similarity=0.390 Sum_probs=200.0
Q ss_pred CCeeEEeeeccCCeEEEEEEEEcc-CCcEEEEEEeecCCc---chHHHHHHHHHHhcC---CCCCeeeeeEEEEe-----
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKV-TKELVAVKYIERGDK---IDENVQREIINHRSL---RHPNIVRFKEVILT----- 90 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~-~~~~~aiK~~~~~~~---~~~~~~~e~~~l~~l---~h~~i~~~~~~~~~----- 90 (298)
++|++.+.||+|+||.||++++.. +++.+|+|.+..... ....+.+|+.+++.+ +||||+++++++..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 479999999999999999999854 468899998865322 223455677766655 69999999998852
Q ss_pred CCeEEEEEeccCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCcc
Q 022401 91 PTHLAIVMEYASGGELFERICNA--GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYS 168 (298)
Q Consensus 91 ~~~~~lv~~~~~~~sL~~~l~~~--~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~ 168 (298)
...+++|+|+++ ++|.+++... ..+++..++.++.|++.||.|||+.|++|+||||+||+++.++. ++|+|||++
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~--~kl~Dfg~~ 157 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ--IKLADFGLA 157 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCC--EEEccccce
Confidence 356899999996 5888888653 35899999999999999999999999999999999999998887 999999998
Q ss_pred ccccCCCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCC-CCC--
Q 022401 169 KSSVLHSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQY-SVP-- 245 (298)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~-- 245 (298)
.............+++.|+|||.+.+..++.+ +||||+|+++|+|++|..||......+.+............ .++
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~ 236 (290)
T cd07862 158 RIYSFQMALTSVVVTLWYRAPEVLLQSSYATP-VDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 236 (290)
T ss_pred EeccCCcccccccccccccChHHHhCCCCCCc-cchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhh
Confidence 75544433445567899999999877777665 99999999999999999999987765554444332211000 000
Q ss_pred ------------------CCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 246 ------------------DTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 246 ------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
....+++.+.+++.+||+.||++|||+ .++++|||+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~--------~~~l~hp~f 290 (290)
T cd07862 237 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISA--------YSALSHPYF 290 (290)
T ss_pred hcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCH--------HHHhcCCCC
Confidence 012467889999999999999999987 455578885
No 79
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=9.3e-44 Score=307.70 Aligned_cols=248 Identities=31% Similarity=0.475 Sum_probs=203.5
Q ss_pred eeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhc-CCCCCeeeeeEEEEeCCeEEEEEeccCC
Q 022401 29 RDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRS-LRHPNIVRFKEVILTPTHLAIVMEYASG 103 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~~~~~~ 103 (298)
+.||+|+||.||++++..+++.||+|++.... ........|..++.. ++||||+++++++.+++.+++||||+.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 47999999999999999999999999987532 223445667777765 4899999999999999999999999999
Q ss_pred CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC-CCCCCCCC
Q 022401 104 GELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH-SQPKSTVG 182 (298)
Q Consensus 104 ~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~-~~~~~~~~ 182 (298)
++|...+.....+++..+..++.|++.||+|||++|++||||||+||+++.++. ++|+|||++...... .......+
T Consensus 81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~~~~~~~g 158 (316)
T cd05620 81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGH--IKIADFGMCKENVFGDNRASTFCG 158 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCC--EEeCccCCCeecccCCCceeccCC
Confidence 999999988888999999999999999999999999999999999999998887 999999987633221 22234457
Q ss_pred CCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhh
Q 022401 183 TPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIF 262 (298)
Q Consensus 183 ~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 262 (298)
++.|+|||++.+..++.+ +||||+|+++|+|++|..||...+.. .....+.......+ ..++.++.++|.+||
T Consensus 159 t~~y~aPE~~~~~~~~~~-~DiwslGvil~el~~g~~Pf~~~~~~----~~~~~~~~~~~~~~--~~~~~~~~~li~~~l 231 (316)
T cd05620 159 TPDYIAPEILQGLKYTFS-VDWWSFGVLLYEMLIGQSPFHGDDED----ELFESIRVDTPHYP--RWITKESKDILEKLF 231 (316)
T ss_pred CcCccCHHHHcCCCCCcc-cchhhhHHHHHHHHhCCCCCCCCCHH----HHHHHHHhCCCCCC--CCCCHHHHHHHHHHc
Confidence 899999999988777665 99999999999999999999875542 23333333333333 347899999999999
Q ss_pred hhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 263 VADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 263 ~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
+.||.+||++. ..+.+|||+.+.
T Consensus 232 ~~dP~~R~~~~-------~~~~~h~~f~~~ 254 (316)
T cd05620 232 ERDPTRRLGVV-------GNIRGHPFFKTI 254 (316)
T ss_pred cCCHHHcCCCh-------HHHHcCCCcCCC
Confidence 99999999873 245678888654
No 80
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-44 Score=299.39 Aligned_cols=256 Identities=29% Similarity=0.424 Sum_probs=214.9
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeC--C---eEEEE
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTP--T---HLAIV 97 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~---~~~lv 97 (298)
-.|.-.+++|.|+||+||.+....++..+|||..-.+.+. ...|+++++.+.||||+++.-+|... . ...+|
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~---knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY---KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc---CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 4689999999999999999999989999999988765542 23589999999999999999998643 2 45799
Q ss_pred EeccCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccC
Q 022401 98 MEYASGGELFERICN----AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 173 (298)
Q Consensus 98 ~~~~~~~sL~~~l~~----~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~ 173 (298)
+||++. +|.+.+.. +..++.-.++-+.+||++||.|||+.||+||||||.|+|+|.+.. .+||+|||.|.....
T Consensus 101 leymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg-~LKicDFGSAK~L~~ 178 (364)
T KOG0658|consen 101 LEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTG-VLKICDFGSAKVLVK 178 (364)
T ss_pred HHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCC-eEEeccCCcceeecc
Confidence 999965 88888763 577899999999999999999999999999999999999998754 599999999998888
Q ss_pred CCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcC--------C---
Q 022401 174 HSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQ--------Y--- 242 (298)
Q Consensus 174 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~--------~--- 242 (298)
.....+..++..|.|||.+.+...++.+.||||.||++.||+-|+..|.+.+..+++...++-+.... .
T Consensus 179 ~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~ 258 (364)
T KOG0658|consen 179 GEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYT 258 (364)
T ss_pred CCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccc
Confidence 88888888999999999999987777779999999999999999999999888777766555432111 0
Q ss_pred --CC----------CCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 243 --SV----------PDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 243 --~~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
.. -.....+++..+|+.++|+.+|.+|.++ .+++.|||+++
T Consensus 259 ~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~--------~~~l~h~fFde 311 (364)
T KOG0658|consen 259 EFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSA--------LEALAHPFFDE 311 (364)
T ss_pred cccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCH--------HHHhcchhhHH
Confidence 00 0223478999999999999999999988 56667777764
No 81
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.2e-43 Score=311.68 Aligned_cols=258 Identities=28% Similarity=0.428 Sum_probs=205.8
Q ss_pred CCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC--cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEE
Q 022401 19 MHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD--KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAI 96 (298)
Q Consensus 19 ~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 96 (298)
....++|++++.||+|+||.||++++..+++.||+|++.... .....+.+|+.+++.++|+||+++++++..++.+++
T Consensus 70 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 149 (353)
T PLN00034 70 AKSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQV 149 (353)
T ss_pred CCCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEE
Confidence 334578999999999999999999999899999999986543 234568899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC-
Q 022401 97 VMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS- 175 (298)
Q Consensus 97 v~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~- 175 (298)
|+||+.+++|... ...++..+..++.|++.||+|||++|++|+||||+||+++.++. ++|+|||++.......
T Consensus 150 v~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~--~kL~DfG~~~~~~~~~~ 223 (353)
T PLN00034 150 LLEFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKN--VKIADFGVSRILAQTMD 223 (353)
T ss_pred EEecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCC--EEEcccccceecccccc
Confidence 9999999988543 34567888999999999999999999999999999999998887 9999999986443222
Q ss_pred CCCCCCCCCcccCccccccc----cCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCC
Q 022401 176 QPKSTVGTPAYIAPEVLLRH----EYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPIS 251 (298)
Q Consensus 176 ~~~~~~~~~~~~aPE~~~~~----~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (298)
......++..|+|||.+... .+...++|||||||++|+|++|..||......+ .......+.... .......++
T Consensus 224 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~ 301 (353)
T PLN00034 224 PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGD-WASLMCAICMSQ-PPEAPATAS 301 (353)
T ss_pred cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc-HHHHHHHHhccC-CCCCCCccC
Confidence 12344688999999987432 333445999999999999999999998543322 223333322211 222334578
Q ss_pred HHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 252 QECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 252 ~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
.++.+||.+||+.||++|||+ .++++|||+...
T Consensus 302 ~~l~~li~~~l~~~P~~Rpt~--------~ell~hp~~~~~ 334 (353)
T PLN00034 302 REFRHFISCCLQREPAKRWSA--------MQLLQHPFILRA 334 (353)
T ss_pred HHHHHHHHHHccCChhhCcCH--------HHHhcCcccccC
Confidence 999999999999999999987 556689998754
No 82
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=2.4e-44 Score=317.73 Aligned_cols=261 Identities=28% Similarity=0.374 Sum_probs=216.0
Q ss_pred CCCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCC-C-----CCeeeeeEEEEeC
Q 022401 18 IMHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLR-H-----PNIVRFKEVILTP 91 (298)
Q Consensus 18 ~~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~-h-----~~i~~~~~~~~~~ 91 (298)
......+|.+.+.||+|.||.|.+|.+..+++.||||+++.......+...|+.+|..++ | -|+++++++|...
T Consensus 181 ~d~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr 260 (586)
T KOG0667|consen 181 NDHIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFR 260 (586)
T ss_pred cceeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccc
Confidence 334445899999999999999999999999999999999998888888889999999886 3 4799999999999
Q ss_pred CeEEEEEeccCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccc
Q 022401 92 THLAIVMEYASGGELFERICNAG--RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK 169 (298)
Q Consensus 92 ~~~~lv~~~~~~~sL~~~l~~~~--~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~ 169 (298)
+++|+|+|.. ..+|.+++.++. .++...+..++.||+.||..||+.||+|+||||+|||+.+.+.+.+||+|||+++
T Consensus 261 ~HlciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc 339 (586)
T KOG0667|consen 261 NHLCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSC 339 (586)
T ss_pred cceeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEeccccc
Confidence 9999999999 559999997654 5889999999999999999999999999999999999987777789999999987
Q ss_pred cccCCCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhc---------
Q 022401 170 SSVLHSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSV--------- 240 (298)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~--------- 240 (298)
......- ....+..|.|||++.+.+|+.+ .|||||||++.||++|.+.|.+.++.+++..++.-+...
T Consensus 340 ~~~q~vy--tYiQSRfYRAPEVILGlpY~~~-IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~ 416 (586)
T KOG0667|consen 340 FESQRVY--TYIQSRFYRAPEVILGLPYDTA-IDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAK 416 (586)
T ss_pred ccCCcce--eeeeccccccchhhccCCCCCc-cceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhcc
Confidence 4433322 5556778999999999999888 999999999999999999998888766655443322100
Q ss_pred ---------------------------------------CCCCC-CCC--------CCCHHHHHHHHHhhhhCCCCcccc
Q 022401 241 ---------------------------------------QYSVP-DTN--------PISQECRDLISRIFVADPAAVSIF 272 (298)
Q Consensus 241 ---------------------------------------~~~~~-~~~--------~~~~~l~~li~~~l~~dp~~Rps~ 272 (298)
....| ... .-...+.+||.+||.+||.+|+|.
T Consensus 417 ~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp 496 (586)
T KOG0667|consen 417 KAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITP 496 (586)
T ss_pred ccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCH
Confidence 00001 000 012468999999999999999988
Q ss_pred cccchhhhHHHhhhhhhh
Q 022401 273 FFPLNMSCLLLFSFVWMF 290 (298)
Q Consensus 273 ~~~l~~~~~~~~~hp~~~ 290 (298)
.+.++|||+.
T Consensus 497 --------~qal~Hpfl~ 506 (586)
T KOG0667|consen 497 --------AQALNHPFLT 506 (586)
T ss_pred --------HHHhcCcccc
Confidence 5555888887
No 83
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.7e-43 Score=307.47 Aligned_cols=258 Identities=26% Similarity=0.396 Sum_probs=211.7
Q ss_pred eeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhcC-CCCCeeeeeEEEEeCCeEEEEEeccCC
Q 022401 29 RDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRSL-RHPNIVRFKEVILTPTHLAIVMEYASG 103 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~~~~~~ 103 (298)
+.||+|+||.||++++..+++.+|+|++.... .....+.+|..++.++ +||+|+++++++...+.+++|+||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 47999999999999999999999999998642 2234567888888888 699999999999999999999999999
Q ss_pred CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccC-CCCCCCCCC
Q 022401 104 GELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL-HSQPKSTVG 182 (298)
Q Consensus 104 ~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~-~~~~~~~~~ 182 (298)
++|...+.....+++..++.++.|++.||+|||++|++|+||||+||+++.++. ++|+|||++..... ........+
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~--~kl~Dfg~~~~~~~~~~~~~~~~g 158 (327)
T cd05617 81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGH--IKLTDYGMCKEGLGPGDTTSTFCG 158 (327)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCC--EEEeccccceeccCCCCceecccC
Confidence 999999888888999999999999999999999999999999999999998887 99999998864222 222234558
Q ss_pred CCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCc---hhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHH
Q 022401 183 TPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEP---KDFRKTIQRILSVQYSVPDTNPISQECRDLIS 259 (298)
Q Consensus 183 ~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (298)
++.|+|||.+.+..++.+ +||||||+++|+|++|..||...... .......+.+....... +..++..+.+++.
T Consensus 159 t~~y~aPE~~~~~~~~~~-~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~~~~~~~~li~ 235 (327)
T cd05617 159 TPNYIAPEILRGEEYGFS-VDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRI--PRFLSVKASHVLK 235 (327)
T ss_pred CcccCCHHHHCCCCCCch-heeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCC--CCCCCHHHHHHHH
Confidence 899999999988777665 99999999999999999999643221 11122333334444333 3447899999999
Q ss_pred HhhhhCCCCcccccccchhhhHHHhhhhhhhhhh
Q 022401 260 RIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDAT 293 (298)
Q Consensus 260 ~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~~ 293 (298)
+||+.||.+|+++.... ...++.+|||+.+..
T Consensus 236 ~~L~~dP~~R~~~~~~~--~~~~i~~h~~f~~~~ 267 (327)
T cd05617 236 GFLNKDPKERLGCQPQT--GFSDIKSHTFFRSID 267 (327)
T ss_pred HHhccCHHHcCCCCCCC--CHHHHHcCCCCCCCC
Confidence 99999999999976543 567889999997643
No 84
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.4e-44 Score=311.49 Aligned_cols=253 Identities=32% Similarity=0.477 Sum_probs=223.8
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC---cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCe-EEEE
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD---KIDENVQREIINHRSLRHPNIVRFKEVILTPTH-LAIV 97 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-~~lv 97 (298)
.++|..++++|.|+||.++.++++..++.|++|.+.... .......+|+.++.+++||||+.+.+.|..++. +++|
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence 478999999999999999999999999999999987643 333467899999999999999999999999887 9999
Q ss_pred EeccCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC
Q 022401 98 MEYASGGELFERICNAG--RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS 175 (298)
Q Consensus 98 ~~~~~~~sL~~~l~~~~--~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~ 175 (298)
|+|++||++.+.+.... .+++..+..++.|++.|++|||++.|+|||||+.|||++.++. ++|+|||++.......
T Consensus 83 m~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~--VkLgDfGlaK~l~~~~ 160 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKK--VKLGDFGLAKILNPED 160 (426)
T ss_pred EeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCc--eeecchhhhhhcCCch
Confidence 99999999999986543 5899999999999999999999999999999999999999998 9999999998777665
Q ss_pred -CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHH
Q 022401 176 -QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQEC 254 (298)
Q Consensus 176 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (298)
......|++.|++||.+.+.+|..+ +|||||||++|||.+-..+|...+- ..++.++..+. -.|.+..++.++
T Consensus 161 ~~a~tvvGTp~YmcPEil~d~pYn~K-SDiWsLGC~~yEm~~lk~aF~a~~m----~~Li~ki~~~~-~~Plp~~ys~el 234 (426)
T KOG0589|consen 161 SLASTVVGTPYYMCPEILSDIPYNEK-SDIWSLGCCLYEMCTLKPAFKASNM----SELILKINRGL-YSPLPSMYSSEL 234 (426)
T ss_pred hhhheecCCCcccCHHHhCCCCCCcc-CcchhhcchHHHHHhcccccCccch----HHHHHHHhhcc-CCCCCccccHHH
Confidence 6677889999999999999999888 9999999999999999999998665 45555555555 335666689999
Q ss_pred HHHHHHhhhhCCCCcccccccchhhhHH
Q 022401 255 RDLISRIFVADPAAVSIFFFPLNMSCLL 282 (298)
Q Consensus 255 ~~li~~~l~~dp~~Rps~~~~l~~~~~~ 282 (298)
+.+|+.||..+|+.||++.++|.++.+.
T Consensus 235 ~~lv~~~l~~~P~~RPsa~~LL~~P~l~ 262 (426)
T KOG0589|consen 235 RSLVKSMLRKNPEHRPSALELLRRPHLL 262 (426)
T ss_pred HHHHHHHhhcCCccCCCHHHHhhChhhh
Confidence 9999999999999999998888874444
No 85
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.7e-43 Score=309.30 Aligned_cols=257 Identities=25% Similarity=0.401 Sum_probs=202.5
Q ss_pred CCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC---CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCC----
Q 022401 20 HDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG---DKIDENVQREIINHRSLRHPNIVRFKEVILTPT---- 92 (298)
Q Consensus 20 ~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 92 (298)
...++|++.+.||+|+||.||.+.+..++..+|+|.+... ......+.+|+.+++.++||||+++++++....
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 3468999999999999999999999989999999998653 233456778999999999999999999986543
Q ss_pred --eEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCcccc
Q 022401 93 --HLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKS 170 (298)
Q Consensus 93 --~~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~ 170 (298)
.+|+|+||+++ ++...+.. .++...+..++.|++.||.|||+.|++||||||+||+++.++. ++|+|||++..
T Consensus 98 ~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~--~kl~Dfg~a~~ 172 (359)
T cd07876 98 FQDVYLVMELMDA-NLCQVIHM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT--LKILDFGLART 172 (359)
T ss_pred cceeEEEEeCCCc-CHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCC--EEEecCCCccc
Confidence 57999999976 56555533 4788999999999999999999999999999999999998887 99999999875
Q ss_pred ccCCCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHH-------------
Q 022401 171 SVLHSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRI------------- 237 (298)
Q Consensus 171 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~------------- 237 (298)
...........+++.|+|||.+.+..++.+ +||||||+++|+|++|..||...+..+.+.......
T Consensus 173 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~-~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (359)
T cd07876 173 ACTNFMMTPYVVTRYYRAPEVILGMGYKEN-VDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQP 251 (359)
T ss_pred cccCccCCCCcccCCCCCchhccCCCCCcc-hhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 443333344567889999999988777766 999999999999999999998766543332222111
Q ss_pred -----hhcCCCC------------------CCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhh
Q 022401 238 -----LSVQYSV------------------PDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMF 290 (298)
Q Consensus 238 -----~~~~~~~------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~ 290 (298)
....... ......++++.+||.+||..||++|||+. ++++|||+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~--------e~l~hp~~~ 319 (359)
T cd07876 252 TVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVD--------EALRHPYIT 319 (359)
T ss_pred HHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHH--------HHhcCchhh
Confidence 0000000 01112457899999999999999999884 555777775
No 86
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=2.1e-43 Score=305.54 Aligned_cols=248 Identities=34% Similarity=0.511 Sum_probs=202.7
Q ss_pred eeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhc-CCCCCeeeeeEEEEeCCeEEEEEeccCC
Q 022401 29 RDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRS-LRHPNIVRFKEVILTPTHLAIVMEYASG 103 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~~~~~~ 103 (298)
+.||+|+||.||++++..+++.||+|++.... ...+....|..++.. .+||||+++++++..+..+++|+||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 47999999999999999999999999987532 222334456666654 4899999999999999999999999999
Q ss_pred CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccC-CCCCCCCCC
Q 022401 104 GELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL-HSQPKSTVG 182 (298)
Q Consensus 104 ~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~-~~~~~~~~~ 182 (298)
++|...+.....+++..+..++.|++.||.|||+.|++||||||+||+++.++. ++|+|||++..... ........+
T Consensus 81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~--~kL~Dfg~a~~~~~~~~~~~~~~g 158 (316)
T cd05592 81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGH--IKIADFGMCKENMNGEGKASTFCG 158 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCC--EEEccCcCCeECCCCCCccccccC
Confidence 999999988888999999999999999999999999999999999999998887 99999999864322 222234458
Q ss_pred CCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhh
Q 022401 183 TPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIF 262 (298)
Q Consensus 183 ~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 262 (298)
++.|+|||++.+..++.+ +||||||+++|+|++|..||...+.. .....+....... +..++.++.+++.+||
T Consensus 159 t~~y~aPE~~~~~~~~~~-~DvwslG~il~ell~G~~Pf~~~~~~----~~~~~i~~~~~~~--~~~~~~~~~~ll~~~l 231 (316)
T cd05592 159 TPDYIAPEILKGQKYNES-VDWWSFGVLLYEMLIGQSPFHGEDED----ELFDSILNDRPHF--PRWISKEAKDCLSKLF 231 (316)
T ss_pred CccccCHHHHcCCCCCCc-ccchhHHHHHHHHHhCCCCCCCCCHH----HHHHHHHcCCCCC--CCCCCHHHHHHHHHHc
Confidence 899999999988777666 99999999999999999999876542 3333343333333 3347899999999999
Q ss_pred hhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 263 VADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 263 ~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
+.||.+||++. ..+++|||+.+.
T Consensus 232 ~~~P~~R~~~~-------~~l~~h~~~~~~ 254 (316)
T cd05592 232 ERDPTKRLGVD-------GDIRQHPFFRGI 254 (316)
T ss_pred cCCHHHcCCCh-------HHHHcCcccCCC
Confidence 99999999863 355678888653
No 87
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=4.5e-44 Score=300.87 Aligned_cols=253 Identities=36% Similarity=0.583 Sum_probs=207.3
Q ss_pred eeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHH---HHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEecc
Q 022401 25 YDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDEN---VQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYA 101 (298)
Q Consensus 25 y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~---~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~ 101 (298)
|++++.||+|+||.||++++..++..+|+|++......... ..+|+.++++++||||+++.+++.+....+++++++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 89999999999999999999999999999999887544433 345999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccc-cCCCCCCCC
Q 022401 102 SGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSS-VLHSQPKST 180 (298)
Q Consensus 102 ~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~-~~~~~~~~~ 180 (298)
.+++|.+++.....++...++.++.|++.||.+||+.|++|+||+|+||+++.++. ++|+|||.+... .........
T Consensus 81 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~--~~l~Dfg~~~~~~~~~~~~~~~ 158 (260)
T PF00069_consen 81 PGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGE--VKLIDFGSSVKLSENNENFNPF 158 (260)
T ss_dssp TTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSE--EEESSGTTTEESTSTTSEBSSS
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccc--cccccccccccccccccccccc
Confidence 99999999987888999999999999999999999999999999999999998887 999999987642 233334456
Q ss_pred CCCCcccCccccc-cccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCC--CCCCCCCCCHHHHHH
Q 022401 181 VGTPAYIAPEVLL-RHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQY--SVPDTNPISQECRDL 257 (298)
Q Consensus 181 ~~~~~~~aPE~~~-~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~l 257 (298)
.++..|+|||.+. +... ..++|+||+|+++++|++|..||......+. .....+...... ........+.++.++
T Consensus 159 ~~~~~y~aPE~~~~~~~~-~~~~Di~slG~il~~l~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 236 (260)
T PF00069_consen 159 VGTPEYMAPEVLQQGKKY-TRKSDIWSLGIILYELLTGKLPFEESNSDDQ-LEIIEKILKRPLPSSSQQSREKSEELRDL 236 (260)
T ss_dssp SSSGGGSCHHHHTTTSSB-STHHHHHHHHHHHHHHHHSSSSSTTSSHHHH-HHHHHHHHHTHHHHHTTSHTTSHHHHHHH
T ss_pred cccccccccccccccccc-cccccccccccccccccccccccccccchhh-hhhhhhcccccccccccccchhHHHHHHH
Confidence 6788999999987 4455 4449999999999999999999998732222 222222222111 111111124899999
Q ss_pred HHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 258 ISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 258 i~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
+.+||+.||.+|||+ .++++|||+
T Consensus 237 i~~~l~~~p~~R~~~--------~~l~~~~~~ 260 (260)
T PF00069_consen 237 IKKMLSKDPEQRPSA--------EELLKHPWF 260 (260)
T ss_dssp HHHHSSSSGGGSTTH--------HHHHTSGGG
T ss_pred HHHHccCChhHCcCH--------HHHhcCCCC
Confidence 999999999999987 666688885
No 88
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=2.5e-43 Score=305.02 Aligned_cols=247 Identities=32% Similarity=0.496 Sum_probs=202.9
Q ss_pred eeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhc-CCCCCeeeeeEEEEeCCeEEEEEeccCC
Q 022401 29 RDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRS-LRHPNIVRFKEVILTPTHLAIVMEYASG 103 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~~~~~~ 103 (298)
+.||+|+||.||++++..+++.||+|++.... ........|..++.. ++||||+++++++..++.+++|+||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 47999999999999999899999999987642 223445567777765 5899999999999999999999999999
Q ss_pred CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC-CCCCCCCC
Q 022401 104 GELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH-SQPKSTVG 182 (298)
Q Consensus 104 ~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~-~~~~~~~~ 182 (298)
++|...+.....+++.++..++.|++.||.|||++|++|+||||+||+++.++. ++|+|||++...... .......+
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~--~kl~Dfg~~~~~~~~~~~~~~~~g 158 (316)
T cd05619 81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGH--IKIADFGMCKENMLGDAKTCTFCG 158 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCC--EEEccCCcceECCCCCCceeeecC
Confidence 999999988788999999999999999999999999999999999999998887 999999987633221 22234457
Q ss_pred CCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhh
Q 022401 183 TPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIF 262 (298)
Q Consensus 183 ~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 262 (298)
++.|+|||++.+..++.+ +||||+||++|+|++|..||...+. ....+.+.......+ ..++.++.++|.+||
T Consensus 159 t~~y~aPE~~~~~~~~~~-~DvwslG~il~el~~G~~pf~~~~~----~~~~~~i~~~~~~~~--~~~~~~~~~li~~~l 231 (316)
T cd05619 159 TPDYIAPEILLGQKYNTS-VDWWSFGVLLYEMLIGQSPFHGHDE----EELFQSIRMDNPCYP--RWLTREAKDILVKLF 231 (316)
T ss_pred CccccCHHHHcCCCCCch-hhhhhHHHHHHHHHhCCCCCCCCCH----HHHHHHHHhCCCCCC--ccCCHHHHHHHHHHh
Confidence 899999999987777665 9999999999999999999987553 233333333333332 347899999999999
Q ss_pred hhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 263 VADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 263 ~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
+.||.+||++. .++.+|||+.+
T Consensus 232 ~~~P~~R~~~~-------~~l~~h~~~~~ 253 (316)
T cd05619 232 VREPERRLGVK-------GDIRQHPFFRE 253 (316)
T ss_pred ccCHhhcCCCh-------HHHHcCcccCC
Confidence 99999999874 25568888865
No 89
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1e-43 Score=308.70 Aligned_cols=250 Identities=28% Similarity=0.447 Sum_probs=206.6
Q ss_pred eeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHH-HHhcCCCCCeeeeeEEEEeCCeEEEEEeccCC
Q 022401 29 RDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREII-NHRSLRHPNIVRFKEVILTPTHLAIVMEYASG 103 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~~ 103 (298)
+.||+|+||.||++++..+|+.+|+|++.... .....+..|.. +++.++||||+++++++..++.+++|+||+.+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46999999999999999999999999987532 22233444443 56778999999999999999999999999999
Q ss_pred CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccC-CCCCCCCCC
Q 022401 104 GELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL-HSQPKSTVG 182 (298)
Q Consensus 104 ~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~-~~~~~~~~~ 182 (298)
++|...+.....+++..+..++.||+.||+|||+.|++||||||+||+++.++. ++|+|||++..... ........+
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~--~kL~DfG~~~~~~~~~~~~~~~~g 158 (325)
T cd05604 81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGH--VVLTDFGLCKEGIAQSDTTTTFCG 158 (325)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCC--EEEeecCCcccCCCCCCCcccccC
Confidence 999999988888999999999999999999999999999999999999998887 99999998864322 222234458
Q ss_pred CCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhh
Q 022401 183 TPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIF 262 (298)
Q Consensus 183 ~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 262 (298)
++.|+|||.+.+..++.+ +||||||+++|+|++|..||...+.. +....+....... ....+.++.+++.+||
T Consensus 159 t~~y~aPE~~~~~~~~~~-~DvwslG~il~el~~G~~pf~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~~ll~~ll 231 (325)
T cd05604 159 TPEYLAPEVIRKQPYDNT-VDWWCLGAVLYEMLYGLPPFYCRDVA----EMYDNILHKPLVL--RPGASLTAWSILEELL 231 (325)
T ss_pred ChhhCCHHHHcCCCCCCc-CccccccceehhhhcCCCCCCCCCHH----HHHHHHHcCCccC--CCCCCHHHHHHHHHHh
Confidence 899999999988777665 99999999999999999999875542 3334444433332 2347899999999999
Q ss_pred hhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 263 VADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 263 ~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
..||.+||++.+.+ .+++.|||+.+
T Consensus 232 ~~~p~~R~~~~~~~----~~i~~h~~f~~ 256 (325)
T cd05604 232 EKDRQRRLGAKEDF----LEIQEHPFFES 256 (325)
T ss_pred ccCHHhcCCCCCCH----HHHhcCCCcCC
Confidence 99999999986554 67889999874
No 90
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=3.2e-43 Score=302.44 Aligned_cols=266 Identities=24% Similarity=0.399 Sum_probs=211.9
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC--cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEE
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD--KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
..++|++.+.||.|++|.||++.+..++..||+|.+.... .....+.+|+.++++++||||+++++++..+..+++|+
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 83 (301)
T cd07873 4 KLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 83 (301)
T ss_pred cccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEE
Confidence 3478999999999999999999999899999999987543 22345778999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC-C
Q 022401 99 EYASGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-Q 176 (298)
Q Consensus 99 ~~~~~~sL~~~l~~-~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~-~ 176 (298)
||+++ +|.+.+.. ...+++..+..++.|++.||.|||+.|++|+||+|+||+++.++. ++|+|||++....... .
T Consensus 84 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~--~kl~dfg~~~~~~~~~~~ 160 (301)
T cd07873 84 EYLDK-DLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGE--LKLADFGLARAKSIPTKT 160 (301)
T ss_pred ecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCc--EEECcCcchhccCCCCCc
Confidence 99974 88887765 346899999999999999999999999999999999999998887 9999999886433222 2
Q ss_pred CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhc---------------C
Q 022401 177 PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSV---------------Q 241 (298)
Q Consensus 177 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~---------------~ 241 (298)
.....+++.|+|||.+.+......++||||||+++|+|++|..||...+..+........+... .
T Consensus 161 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (301)
T cd07873 161 YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKS 240 (301)
T ss_pred ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccc
Confidence 2234567889999998765544555999999999999999999998765433322221111000 0
Q ss_pred CCCC---------CCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhhhhhcC
Q 022401 242 YSVP---------DTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDATENYH 297 (298)
Q Consensus 242 ~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~~~~~~ 297 (298)
...+ ....+++++.++|.+||+.||.+|||+ .++++|||+..-.|.+|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~--------~eil~h~~f~~~~~~~~ 297 (301)
T cd07873 241 YNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISA--------EEAMKHPYFHCLGERIH 297 (301)
T ss_pred cccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCH--------HHHhcCcccccccchhh
Confidence 0011 112468899999999999999999987 66668999988777765
No 91
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.4e-43 Score=293.39 Aligned_cols=260 Identities=27% Similarity=0.376 Sum_probs=214.1
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc---chHHHHHHHHHHhcCCCCC-eeeeeEEEEeCC-----
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK---IDENVQREIINHRSLRHPN-IVRFKEVILTPT----- 92 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~---~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~----- 92 (298)
...|+.+++||+|.+|+||+|+.+.+|+.||+|.+..+.. .-....+|+.+++.++|+| |+.+.+++-.++
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 4679999999999999999999999999999999987654 3355789999999999999 999999998877
Q ss_pred -eEEEEEeccCCCCHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCc
Q 022401 93 -HLAIVMEYASGGELFERICNAG----RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGY 167 (298)
Q Consensus 93 -~~~lv~~~~~~~sL~~~l~~~~----~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~ 167 (298)
.+++|+||.+ .+|..++...+ .++...++.+++||+.|++|||+++|+||||||.||+++++|. +||+|||+
T Consensus 90 ~~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~--lKlaDFGl 166 (323)
T KOG0594|consen 90 GKLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGV--LKLADFGL 166 (323)
T ss_pred ceEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCc--Eeeeccch
Confidence 8999999995 48888887655 4777899999999999999999999999999999999999887 99999999
Q ss_pred cccccCCC-CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCC-CCC
Q 022401 168 SKSSVLHS-QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQY-SVP 245 (298)
Q Consensus 168 ~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~ 245 (298)
++...... .......+..|.|||.+.+...+....||||+||++.||+++...|.+..+.+++....+-+..... .+|
T Consensus 167 Ara~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp 246 (323)
T KOG0594|consen 167 ARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWP 246 (323)
T ss_pred HHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCC
Confidence 98555333 3566678889999999999865555599999999999999999999998886665555444322210 011
Q ss_pred C----------------CC-------CCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 246 D----------------TN-------PISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 246 ~----------------~~-------~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
. .. ..+++..+++.+||+.+|..|.|+ ...++|||+++.
T Consensus 247 ~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa--------~~al~h~yf~~~ 308 (323)
T KOG0594|consen 247 GVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISA--------KGALTHPYFSEL 308 (323)
T ss_pred CccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCH--------HHHhcChhhccc
Confidence 0 00 123589999999999999999988 455577887754
No 92
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.2e-43 Score=313.79 Aligned_cols=258 Identities=24% Similarity=0.348 Sum_probs=205.3
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC---cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCC-----eEE
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD---KIDENVQREIINHRSLRHPNIVRFKEVILTPT-----HLA 95 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 95 (298)
+|++.+.||+|+||.||++.+..+++.||+|.+.... .....+.+|+.+++.++|+||+++++++.... ..|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4889999999999999999998899999999886432 22356788999999999999999999998776 789
Q ss_pred EEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC
Q 022401 96 IVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS 175 (298)
Q Consensus 96 lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~ 175 (298)
+|+||+. ++|...+.....+++..+..++.|++.||+|||+.|++|+||||+||+++.++. ++|+|||++.......
T Consensus 81 lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~--~kL~Dfg~a~~~~~~~ 157 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCV--LKICDFGLARVEEPDE 157 (372)
T ss_pred EEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCC--EEeccccceeecccCc
Confidence 9999996 578888877788999999999999999999999999999999999999998887 9999999986433221
Q ss_pred --CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHH-----------------
Q 022401 176 --QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQR----------------- 236 (298)
Q Consensus 176 --~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~----------------- 236 (298)
......+++.|+|||.+.+......++||||+||++|+|++|..||...+..+.+......
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 237 (372)
T cd07853 158 SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGAR 237 (372)
T ss_pred cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHH
Confidence 1223356788999999877654455599999999999999999999876654433222111
Q ss_pred --HhhcCCCC-------CCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 237 --ILSVQYSV-------PDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 237 --~~~~~~~~-------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
+....... ......++++.+||.+||+.||.+|||+ .++++|||+.+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~--------~e~l~hp~~~~~ 294 (372)
T cd07853 238 AHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISA--------ADALAHPYLDEG 294 (372)
T ss_pred HHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCH--------HHHhcCHhhCCC
Confidence 11111110 1123357899999999999999999988 555678888763
No 93
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=2.2e-43 Score=306.64 Aligned_cols=249 Identities=29% Similarity=0.496 Sum_probs=204.9
Q ss_pred eeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHH-HHHHhcCCCCCeeeeeEEEEeCCeEEEEEeccCC
Q 022401 29 RDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQRE-IINHRSLRHPNIVRFKEVILTPTHLAIVMEYASG 103 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e-~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~~ 103 (298)
+.||+|+||.||++++..+++.||+|++.... .....+..| ..+++.++||||+++++++...+.+++|+||+.+
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 47999999999999999899999999987532 112233333 3456788999999999999999999999999999
Q ss_pred CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccC-CCCCCCCCC
Q 022401 104 GELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL-HSQPKSTVG 182 (298)
Q Consensus 104 ~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~-~~~~~~~~~ 182 (298)
++|.+.+.....+++..+..++.|++.||.|||+.|++||||||+||+++.++. ++|+|||++..... ........+
T Consensus 81 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~--~kl~DfG~a~~~~~~~~~~~~~~g 158 (325)
T cd05602 81 GELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGH--IVLTDFGLCKENIEHNGTTSTFCG 158 (325)
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCC--EEEccCCCCcccccCCCCcccccC
Confidence 999999988888999999999999999999999999999999999999998887 99999998864322 222334458
Q ss_pred CCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhh
Q 022401 183 TPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIF 262 (298)
Q Consensus 183 ~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 262 (298)
++.|+|||++.+..++.+ +|||||||++|+|++|..||...+.. +....+...... ....++.++.++|.+||
T Consensus 159 t~~y~aPE~~~~~~~~~~-~DiwslG~il~el~~g~~pf~~~~~~----~~~~~i~~~~~~--~~~~~~~~~~~li~~~l 231 (325)
T cd05602 159 TPEYLAPEVLHKQPYDRT-VDWWCLGAVLYEMLYGLPPFYSRNTA----EMYDNILNKPLQ--LKPNITNSARHLLEGLL 231 (325)
T ss_pred CccccCHHHHcCCCCCCc-cccccccHHHHHHhcCCCCCCCCCHH----HHHHHHHhCCcC--CCCCCCHHHHHHHHHHc
Confidence 899999999988777665 99999999999999999999875543 333344333333 23357999999999999
Q ss_pred hhCCCCcccccccchhhhHHHhhhhhhh
Q 022401 263 VADPAAVSIFFFPLNMSCLLLFSFVWMF 290 (298)
Q Consensus 263 ~~dp~~Rps~~~~l~~~~~~~~~hp~~~ 290 (298)
+.||.+|+++.+.+ .++.+|+|+.
T Consensus 232 ~~~p~~R~~~~~~~----~~i~~~~~~~ 255 (325)
T cd05602 232 QKDRTKRLGAKDDF----MEIKNHIFFS 255 (325)
T ss_pred ccCHHHCCCCCCCH----HHHhcCcccC
Confidence 99999999998765 5788999875
No 94
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=2e-43 Score=311.72 Aligned_cols=266 Identities=30% Similarity=0.450 Sum_probs=212.6
Q ss_pred CCCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC----CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCe
Q 022401 18 IMHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG----DKIDENVQREIINHRSLRHPNIVRFKEVILTPTH 93 (298)
Q Consensus 18 ~~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 93 (298)
.....++|++.+.||+|+||.||++++..+++.+|+|++... ......+.+|..+++.++||||+++++++..+..
T Consensus 38 ~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~ 117 (371)
T cd05622 38 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY 117 (371)
T ss_pred cCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence 345568999999999999999999999999999999998642 2223456789999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccC
Q 022401 94 LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 173 (298)
Q Consensus 94 ~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~ 173 (298)
+++|+||+++++|.+++... .+++..+..++.|++.||+|||++|++||||||+||+++.++. ++|+|||++.....
T Consensus 118 ~~lv~Ey~~gg~L~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~--ikL~DfG~a~~~~~ 194 (371)
T cd05622 118 LYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGH--LKLADFGTCMKMNK 194 (371)
T ss_pred EEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCC--EEEEeCCceeEcCc
Confidence 99999999999999988654 5789999999999999999999999999999999999998887 99999999864432
Q ss_pred CC--CCCCCCCCCcccCcccccccc---CCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcC--CCCCC
Q 022401 174 HS--QPKSTVGTPAYIAPEVLLRHE---YDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQ--YSVPD 246 (298)
Q Consensus 174 ~~--~~~~~~~~~~~~aPE~~~~~~---~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~ 246 (298)
.. ......+++.|+|||++.... ..+.++|||||||++|+|++|..||...+.. .....+.... ...+.
T Consensus 195 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~----~~~~~i~~~~~~~~~~~ 270 (371)
T cd05622 195 EGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV----GTYSKIMNHKNSLTFPD 270 (371)
T ss_pred CCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHH----HHHHHHHcCCCcccCCC
Confidence 22 223456899999999987543 2344599999999999999999999876543 3334443322 33455
Q ss_pred CCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhhhhhc
Q 022401 247 TNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDATENY 296 (298)
Q Consensus 247 ~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~~~~~ 296 (298)
...++.++.++|..||. +|..|++. ....++++|||+.+....|
T Consensus 271 ~~~~s~~~~~li~~~L~-~~~~r~~r-----~~~~ei~~h~~~~~~~~~~ 314 (371)
T cd05622 271 DNDISKEAKNLICAFLT-DREVRLGR-----NGVEEIKRHLFFKNDQWAW 314 (371)
T ss_pred cCCCCHHHHHHHHHHcC-ChhhhcCC-----CCHHHHhcCcccCCCChhH
Confidence 55689999999999997 55554321 1236677888887655444
No 95
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=2.9e-43 Score=307.54 Aligned_cols=254 Identities=22% Similarity=0.362 Sum_probs=201.8
Q ss_pred CCCCCCeeEEeeeccCCeEEEEEEEEc-----cCCcEEEEEEeecCC--cchHHHHHHHHHHhcC-CCCCeeeeeEEEEe
Q 022401 19 MHDSDRYDFVRDIGSGNFGVARLMRDK-----VTKELVAVKYIERGD--KIDENVQREIINHRSL-RHPNIVRFKEVILT 90 (298)
Q Consensus 19 ~~~~~~y~~~~~lg~g~~~~vy~~~~~-----~~~~~~aiK~~~~~~--~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~ 90 (298)
.+..++|++.+.||.|+||.||+|.+. .+++.||+|++.... .....+.+|+.++..+ +||||+++++++..
T Consensus 3 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 82 (338)
T cd05102 3 EFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTK 82 (338)
T ss_pred ccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecC
Confidence 345689999999999999999999752 345689999987533 2235678999999999 89999999998876
Q ss_pred C-CeEEEEEeccCCCCHHHHHHhC--------------------------------------------------------
Q 022401 91 P-THLAIVMEYASGGELFERICNA-------------------------------------------------------- 113 (298)
Q Consensus 91 ~-~~~~lv~~~~~~~sL~~~l~~~-------------------------------------------------------- 113 (298)
. ..+++++||+++++|.+++...
T Consensus 83 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (338)
T cd05102 83 PNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQE 162 (338)
T ss_pred CCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchh
Confidence 5 4689999999999999888642
Q ss_pred ------CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC---CCCCCCCCC
Q 022401 114 ------GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS---QPKSTVGTP 184 (298)
Q Consensus 114 ------~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~ 184 (298)
.+++..++..++.|++.||.|||++|++|+||||+||+++.++. ++|+|||++....... ......++.
T Consensus 163 ~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~--~kl~DfG~a~~~~~~~~~~~~~~~~~~~ 240 (338)
T cd05102 163 TDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNV--VKICDFGLARDIYKDPDYVRKGSARLPL 240 (338)
T ss_pred ccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCc--EEEeecccccccccCcchhcccCCCCCc
Confidence 23677888999999999999999999999999999999998876 9999999986432211 112234557
Q ss_pred cccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhhh
Q 022401 185 AYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIFV 263 (298)
Q Consensus 185 ~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 263 (298)
.|+|||++.+..++.+ +||||||+++|+|++ |..||........+.. .+..+ .....+...++++.+++.+||+
T Consensus 241 ~y~aPE~~~~~~~~~~-sDiwslG~il~el~~~g~~pf~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~l~~li~~cl~ 315 (338)
T cd05102 241 KWMAPESIFDKVYTTQ-SDVWSFGVLLWEIFSLGASPYPGVQINEEFCQ---RLKDG-TRMRAPENATPEIYRIMLACWQ 315 (338)
T ss_pred cccCcHHhhcCCCCcc-cCHHHHHHHHHHHHhCCCCCCCCCCccHHHHH---HHhcC-CCCCCCCCCCHHHHHHHHHHcc
Confidence 8999999987777666 999999999999997 9999987554333222 22222 2223344578999999999999
Q ss_pred hCCCCcccccccchhh
Q 022401 264 ADPAAVSIFFFPLNMS 279 (298)
Q Consensus 264 ~dp~~Rps~~~~l~~~ 279 (298)
.||.+|||+.+++...
T Consensus 316 ~dp~~RPs~~el~~~l 331 (338)
T cd05102 316 GDPKERPTFSALVEIL 331 (338)
T ss_pred CChhhCcCHHHHHHHH
Confidence 9999999999998643
No 96
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=2.5e-43 Score=305.74 Aligned_cols=250 Identities=30% Similarity=0.475 Sum_probs=205.2
Q ss_pred eeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHH-HHHhcCCCCCeeeeeEEEEeCCeEEEEEeccCC
Q 022401 29 RDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREI-INHRSLRHPNIVRFKEVILTPTHLAIVMEYASG 103 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~-~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~~ 103 (298)
+.||+|+||.||++++..+++.||+|++.+.. .....+..|. .+++.++||||+++++++.+.+..++|+||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 47999999999999999999999999987532 1222344444 467889999999999999999999999999999
Q ss_pred CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCcccccc-CCCCCCCCCC
Q 022401 104 GELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSV-LHSQPKSTVG 182 (298)
Q Consensus 104 ~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~-~~~~~~~~~~ 182 (298)
++|...+.....+++..+..++.||+.||+|||+.|++||||||+||+++.++. ++|+|||++.... .........+
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~--~kl~Dfg~~~~~~~~~~~~~~~~g 158 (321)
T cd05603 81 GELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGH--VVLTDFGLCKEGVEPEETTSTFCG 158 (321)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCC--EEEccCCCCccCCCCCCccccccC
Confidence 999998888888999999999999999999999999999999999999998887 9999999876422 2222334457
Q ss_pred CCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhh
Q 022401 183 TPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIF 262 (298)
Q Consensus 183 ~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 262 (298)
++.|+|||.+.+..++.+ +|||||||++|+|++|..||...+. ......+....... +...+.++.+++.+||
T Consensus 159 t~~y~aPE~~~~~~~~~~-~DiwslG~il~el~~g~~pf~~~~~----~~~~~~i~~~~~~~--~~~~~~~~~~li~~~l 231 (321)
T cd05603 159 TPEYLAPEVLRKEPYDRT-VDWWCLGAVLYEMLYGLPPFYSRDV----SQMYDNILHKPLQL--PGGKTVAACDLLVGLL 231 (321)
T ss_pred CcccCCHHHhcCCCCCCc-CcccccchhhhhhhcCCCCCCCCCH----HHHHHHHhcCCCCC--CCCCCHHHHHHHHHHc
Confidence 889999999987777666 9999999999999999999987653 23344444444333 3346899999999999
Q ss_pred hhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 263 VADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 263 ~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
+.||.+|+++...+ .++++|||+.+
T Consensus 232 ~~~p~~R~~~~~~~----~~~~~~~~~~~ 256 (321)
T cd05603 232 HKDQRRRLGAKADF----LEIKNHVFFSP 256 (321)
T ss_pred cCCHhhcCCCCCCH----HHHhCCCCcCC
Confidence 99999999875443 57889999864
No 97
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=8.4e-43 Score=297.55 Aligned_cols=260 Identities=24% Similarity=0.333 Sum_probs=209.2
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc----chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEe
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK----IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVME 99 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~ 99 (298)
.|++.+.||+|+||.||.+.+..+++.+|+|.+..... ....+.+|+.++++++|++++++.+.+.+.+.+++|+|
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 48899999999999999999999999999998875422 22446789999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCC
Q 022401 100 YASGGELFERICNAG--RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP 177 (298)
Q Consensus 100 ~~~~~sL~~~l~~~~--~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~ 177 (298)
|+.+++|.+.+.... .+++..+..++.|++.||.|||+.|++|+||+|+||+++.++. ++|+|||++.........
T Consensus 81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~--~~l~Dfg~~~~~~~~~~~ 158 (285)
T cd05630 81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGH--IRISDLGLAVHVPEGQTI 158 (285)
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCC--EEEeeccceeecCCCccc
Confidence 999999998885433 5899999999999999999999999999999999999998877 999999988654433333
Q ss_pred CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHH
Q 022401 178 KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDL 257 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (298)
....++..|+|||.+.+..++.+ +||||+|+++|+|++|..||......... .....+.... ........++++.+|
T Consensus 159 ~~~~g~~~y~aPE~~~~~~~~~~-~DiwslG~~l~~l~~g~~Pf~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~l 235 (285)
T cd05630 159 KGRVGTVGYMAPEVVKNERYTFS-PDWWALGCLLYEMIAGQSPFQQRKKKIKR-EEVERLVKEV-QEEYSEKFSPDARSL 235 (285)
T ss_pred cCCCCCccccChHHHcCCCCCCc-cccHHHHHHHHHHHhCCCCCCCCCccchH-HHHHhhhhhh-hhhcCccCCHHHHHH
Confidence 34568899999999988777665 99999999999999999999875432211 1111111111 111234478999999
Q ss_pred HHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 258 ISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 258 i~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
+.+||+.||.+|||+... ...++++|||+..
T Consensus 236 i~~~l~~~p~~R~s~~~~---~~~~~~~h~~~~~ 266 (285)
T cd05630 236 CKMLLCKDPKERLGCQGG---GAREVKEHPLFKQ 266 (285)
T ss_pred HHHHhhcCHHHccCCCCC---chHHHHcChhhhc
Confidence 999999999999984321 2467778888864
No 98
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-45 Score=285.77 Aligned_cols=260 Identities=26% Similarity=0.384 Sum_probs=214.0
Q ss_pred cCCCCCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC-cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCC-
Q 022401 15 DMPIMHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD-KIDENVQREIINHRSLRHPNIVRFKEVILTPT- 92 (298)
Q Consensus 15 ~~~~~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~- 92 (298)
.-.+.+.+++|+|.+.||+|||+.||++++-.+++.||+|.+.... +..+...+|+...++++|||+++.+++...+.
T Consensus 13 ~~tv~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~ 92 (302)
T KOG2345|consen 13 RGTVIINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEK 92 (302)
T ss_pred CCcEEEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhc
Confidence 4456678899999999999999999999999999999999998766 56677889999999999999999999876543
Q ss_pred ----eEEEEEeccCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHhhcC--cEEecCCCCceEeeCCCCCCEEE
Q 022401 93 ----HLAIVMEYASGGELFERICN----AGRFSEDEARFFFQQLISGVSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKI 162 (298)
Q Consensus 93 ----~~~lv~~~~~~~sL~~~l~~----~~~~~~~~~~~i~~~l~~~l~~Lh~~~--i~H~dl~p~nilv~~~~~~~~~l 162 (298)
..|++++|...|||.+.+.. +..+++.+++.|+.++++||++||+.. ++|+||||.||++++++. +++
T Consensus 93 D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~--~vl 170 (302)
T KOG2345|consen 93 DGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGL--PVL 170 (302)
T ss_pred cCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCc--eEE
Confidence 58999999999999988853 336899999999999999999999998 999999999999998777 999
Q ss_pred eecCccccccCCCCCC----------CCCCCCcccCccccccccC--CCCccchHHHHHHHHHHHhCCCCCCCCCCchhH
Q 022401 163 CDFGYSKSSVLHSQPK----------STVGTPAYIAPEVLLRHEY--DGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDF 230 (298)
Q Consensus 163 ~d~~~~~~~~~~~~~~----------~~~~~~~~~aPE~~~~~~~--~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~ 230 (298)
.|||.++......... ...++.-|.|||.+.-... .+.++|||||||++|.|+.|..||...-+.-
T Consensus 171 ~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~G-- 248 (302)
T KOG2345|consen 171 MDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQG-- 248 (302)
T ss_pred EeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcC--
Confidence 9999987444433222 2347888999998753322 2444999999999999999999996532100
Q ss_pred HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchh
Q 022401 231 RKTIQRILSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
-...-.+++++..+|....+++.+.++|++||+.||.+||++.+++..
T Consensus 249 gSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 249 GSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred CeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 011112456677788877799999999999999999999999888754
No 99
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.5e-45 Score=289.86 Aligned_cols=255 Identities=31% Similarity=0.494 Sum_probs=219.7
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc---------chHHHHHHHHHHhcC-CCCCeeeeeEEEEeCC
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK---------IDENVQREIINHRSL-RHPNIVRFKEVILTPT 92 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~---------~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~ 92 (298)
++|.-.+.||.|..++|-.+.++.+|..+|+|++..... ..+.-.+|+.||+++ .||+|+++.++++.+.
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s 96 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA 96 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc
Confidence 368888999999999999999999999999999864321 123345799999998 7999999999999999
Q ss_pred eEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCcccccc
Q 022401 93 HLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 172 (298)
Q Consensus 93 ~~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~ 172 (298)
.+++|++.|+.|.|.+++...-.+++.+...|++|++.|+.|||.++|||+||||+||+++++.+ ++|+|||+++...
T Consensus 97 F~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~--i~isDFGFa~~l~ 174 (411)
T KOG0599|consen 97 FVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMN--IKISDFGFACQLE 174 (411)
T ss_pred hhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccc--eEEeccceeeccC
Confidence 99999999999999999998888999999999999999999999999999999999999998887 9999999999888
Q ss_pred CCCCCCCCCCCCcccCccccccc-----cCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCC--CCC
Q 022401 173 LHSQPKSTVGTPAYIAPEVLLRH-----EYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQY--SVP 245 (298)
Q Consensus 173 ~~~~~~~~~~~~~~~aPE~~~~~-----~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~ 245 (298)
.+......+|+|.|+|||.+... +.+++..|+|+.|+++|-++.|-.||+-... .-+.+-++.+.+ ..+
T Consensus 175 ~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQ----mlMLR~ImeGkyqF~sp 250 (411)
T KOG0599|consen 175 PGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQ----MLMLRMIMEGKYQFRSP 250 (411)
T ss_pred CchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHH----HHHHHHHHhcccccCCc
Confidence 88888888999999999997643 2334559999999999999999999987543 234445555554 455
Q ss_pred CCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 246 DTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 246 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
...+.+++..++|++||+.||.+|.|+.++ +.|||++-
T Consensus 251 eWadis~~~KdLIsrlLqVdp~~Ritake~--------LaHpff~q 288 (411)
T KOG0599|consen 251 EWADISATVKDLISRLLQVDPTKRITAKEA--------LAHPFFIQ 288 (411)
T ss_pred chhhccccHHHHHHHHHeeCchhcccHHHH--------hcChHHHH
Confidence 666789999999999999999999998555 57888753
No 100
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=8.2e-43 Score=297.90 Aligned_cols=254 Identities=25% Similarity=0.374 Sum_probs=200.1
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC---cchHHHHHHHHHHhcC---CCCCeeeeeEEEEeC-----C
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD---KIDENVQREIINHRSL---RHPNIVRFKEVILTP-----T 92 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~---~~~~~~~~e~~~l~~l---~h~~i~~~~~~~~~~-----~ 92 (298)
+|++.+.||+|++|.||++++..+++.+|+|.+.... .......+|+.+++++ +||||+++++++... .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 5999999999999999999999999999999886532 1223455677777655 699999999998642 4
Q ss_pred eEEEEEeccCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCcccc
Q 022401 93 HLAIVMEYASGGELFERICNA--GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKS 170 (298)
Q Consensus 93 ~~~lv~~~~~~~sL~~~l~~~--~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~ 170 (298)
.+++++|++.+ +|.+++... ..+++..+..++.|++.||+|||+.|++|+||+|+||+++.++. ++|+|||++..
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~--~kl~dfg~~~~ 157 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQ--VKLADFGLARI 157 (288)
T ss_pred eEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCC--EEECccCcccc
Confidence 58999999975 788887654 34899999999999999999999999999999999999998887 99999998875
Q ss_pred ccCCCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcC-------CC
Q 022401 171 SVLHSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQ-------YS 243 (298)
Q Consensus 171 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-------~~ 243 (298)
...........++..|+|||.+.+..++.+ +||||+|+++|+|++|..||......+.+.+......... ..
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (288)
T cd07863 158 YSCQMALTPVVVTLWYRAPEVLLQSTYATP-VDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVT 236 (288)
T ss_pred ccCcccCCCccccccccCchHhhCCCCCCc-chhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccccc
Confidence 543333344557888999999987777665 9999999999999999999987665544444333221100 00
Q ss_pred C--------------CCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 244 V--------------PDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 244 ~--------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
. .....+++++.+++.+||+.||++|||+ .+++.|||+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~--------~~~l~hp~f 288 (288)
T cd07863 237 LPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISA--------FRALQHPFF 288 (288)
T ss_pred ccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCH--------HHHhcCCCC
Confidence 0 0012467889999999999999999987 555578885
No 101
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1e-43 Score=309.42 Aligned_cols=251 Identities=31% Similarity=0.463 Sum_probs=204.4
Q ss_pred eccCCeEEEEEEEEccCCcEEEEEEeecCCc----chHHHHHHHHHHhcC---CCCCeeeeeEEEEeCCeEEEEEeccCC
Q 022401 31 IGSGNFGVARLMRDKVTKELVAVKYIERGDK----IDENVQREIINHRSL---RHPNIVRFKEVILTPTHLAIVMEYASG 103 (298)
Q Consensus 31 lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~----~~~~~~~e~~~l~~l---~h~~i~~~~~~~~~~~~~~lv~~~~~~ 103 (298)
||+|+||.||++++..+++.||+|++..... .......|..++... +||||+++++++.....+++|+||+.+
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 6999999999999999999999999865321 122334455666554 699999999999999999999999999
Q ss_pred CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccC-CCCCCCCCC
Q 022401 104 GELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL-HSQPKSTVG 182 (298)
Q Consensus 104 ~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~-~~~~~~~~~ 182 (298)
++|...+.....+++..++.++.|++.||+|||++|++|+||||+||+++.++. ++|+|||++..... ........+
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~--~kl~Dfg~a~~~~~~~~~~~~~~g 158 (330)
T cd05586 81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGH--IALCDFGLSKANLTDNKTTNTFCG 158 (330)
T ss_pred ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCC--EEEecCCcCcCCCCCCCCccCccC
Confidence 999999988888999999999999999999999999999999999999998887 99999999864322 222334568
Q ss_pred CCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhh
Q 022401 183 TPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIF 262 (298)
Q Consensus 183 ~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 262 (298)
++.|+|||++.+......++||||+|+++|+|++|..||...+. ....+.+.......+.. .+++++.++|.+||
T Consensus 159 t~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~----~~~~~~i~~~~~~~~~~-~~~~~~~~li~~~L 233 (330)
T cd05586 159 TTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT----QQMYRNIAFGKVRFPKN-VLSDEGRQFVKGLL 233 (330)
T ss_pred CccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH----HHHHHHHHcCCCCCCCc-cCCHHHHHHHHHHc
Confidence 89999999987655444559999999999999999999987543 33344454454444432 37899999999999
Q ss_pred hhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 263 VADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 263 ~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
+.||.+||++.+.+ .++++|||+.+.
T Consensus 234 ~~~P~~R~~~~~~~----~~ll~h~~~~~~ 259 (330)
T cd05586 234 NRNPQHRLGAHRDA----VELKEHPFFADI 259 (330)
T ss_pred CCCHHHCCCCCCCH----HHHhcCccccCC
Confidence 99999999765443 678899998753
No 102
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-44 Score=295.31 Aligned_cols=257 Identities=29% Similarity=0.414 Sum_probs=207.4
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeec---CCcchHHHHHHHHHHhcCCCCCeeeeeEEEEe-----CCeE
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIER---GDKIDENVQREIINHRSLRHPNIVRFKEVILT-----PTHL 94 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~ 94 (298)
.+|..++.||.|++|.|..|.++.+|+.||||.+.. .....++-.+|+.+++.++|+||+.+.+++.. -+.+
T Consensus 22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~Dv 101 (359)
T KOG0660|consen 22 RYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDV 101 (359)
T ss_pred ceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccccee
Confidence 456668999999999999999999999999999873 23334667799999999999999999999865 3578
Q ss_pred EEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC
Q 022401 95 AIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH 174 (298)
Q Consensus 95 ~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~ 174 (298)
|+|+|+| +.+|...+..++.+++..+..++.|++.||.|+|+.|++||||||.|++++.+-. +|++|||+|+.....
T Consensus 102 YiV~elM-etDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~--lKI~DFGLAR~~~~~ 178 (359)
T KOG0660|consen 102 YLVFELM-ETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCD--LKICDFGLARYLDKF 178 (359)
T ss_pred EEehhHH-hhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCC--EEeccccceeecccc
Confidence 9999999 6689999988888999999999999999999999999999999999999987776 999999999866543
Q ss_pred ---CCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHH--------------
Q 022401 175 ---SQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRI-------------- 237 (298)
Q Consensus 175 ---~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~-------------- 237 (298)
..-.....|.+|.|||.+.....++++.||||+||++.||++|...|.+.+..+++.....-+
T Consensus 179 ~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~ 258 (359)
T KOG0660|consen 179 FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSE 258 (359)
T ss_pred CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccH
Confidence 111233467889999998777666777999999999999999999998866654443222111
Q ss_pred -----hhcCCCCC------CCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhh
Q 022401 238 -----LSVQYSVP------DTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMF 290 (298)
Q Consensus 238 -----~~~~~~~~------~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~ 290 (298)
.......+ ...+.++...+|+++||..||.+|+|+. +++.|||+.
T Consensus 259 ~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~--------eAL~hPYl~ 314 (359)
T KOG0660|consen 259 KARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAE--------EALAHPYLA 314 (359)
T ss_pred HHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHH--------HHhcChhhh
Confidence 11111111 1125789999999999999999999885 555777775
No 103
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=2.1e-42 Score=295.81 Aligned_cols=255 Identities=33% Similarity=0.563 Sum_probs=214.3
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEE
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
++|++.+.||+|++|.||.+.+..+++.+++|++.... ...+.+.+|++++++++||||+++++++.+...+++++
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 47999999999999999999999899999999987532 33456788999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCCC
Q 022401 99 EYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK 178 (298)
Q Consensus 99 ~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~~ 178 (298)
||+++++|.+.+.....+++..+..++.|++.||.+||+.|++|+||+|.||+++.++. ++|+|||++...... ..
T Consensus 81 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~--~kl~dfg~~~~~~~~--~~ 156 (290)
T cd05580 81 EYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGY--IKITDFGFAKRVKGR--TY 156 (290)
T ss_pred ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCC--EEEeeCCCccccCCC--CC
Confidence 99999999999988888999999999999999999999999999999999999998887 999999988654333 33
Q ss_pred CCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHH
Q 022401 179 STVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLI 258 (298)
Q Consensus 179 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (298)
...+++.|+|||.+.+...+.+ +|+||||+++|+|++|..||...+. ....+.+..+....+ ...+..+.++|
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~--~~~~~~l~~li 229 (290)
T cd05580 157 TLCGTPEYLAPEIILSKGYGKA-VDWWALGILIYEMLAGYPPFFDDNP----IQIYEKILEGKVRFP--SFFSPDAKDLI 229 (290)
T ss_pred CCCCCccccChhhhcCCCCCcc-ccHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHhcCCccCC--ccCCHHHHHHH
Confidence 4457889999999877766554 9999999999999999999987553 233333444443333 34689999999
Q ss_pred HHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 259 SRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 259 ~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
.+||+.||.+|++.. .....++++|||+.+
T Consensus 230 ~~~l~~~p~~R~~~~---~~~~~~l~~~~~~~~ 259 (290)
T cd05580 230 RNLLQVDLTKRLGNL---KNGVNDIKNHPWFAG 259 (290)
T ss_pred HHHccCCHHHccCcc---cCCHHHHHcCccccc
Confidence 999999999999442 234577788999764
No 104
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=6.7e-43 Score=307.19 Aligned_cols=256 Identities=26% Similarity=0.378 Sum_probs=201.8
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC---cchHHHHHHHHHHhcCCCCCeeeeeEEEEeC------
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD---KIDENVQREIINHRSLRHPNIVRFKEVILTP------ 91 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 91 (298)
..++|++.+.||+|+||.||.+.+..+++.+|+|.+.... .....+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 4579999999999999999999998889999999887532 2335677899999999999999999998643
Q ss_pred CeEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccc
Q 022401 92 THLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSS 171 (298)
Q Consensus 92 ~~~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~ 171 (298)
...++|+|++++ ++...+.. .++...+..++.|++.||+|||++|++||||||+||+++.++. ++|+|||++...
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~--~kl~Dfg~~~~~ 169 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTA 169 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCC--EEEeeCcccccC
Confidence 357999999976 56665543 4788999999999999999999999999999999999998887 999999998755
Q ss_pred cCCCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhh------------
Q 022401 172 VLHSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILS------------ 239 (298)
Q Consensus 172 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~------------ 239 (298)
..........++..|+|||.+.+..++.+ +||||||+++|+|++|..||...+..+.+......+..
T Consensus 170 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~-~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (355)
T cd07874 170 GTSFMMTPYVVTRYYRAPEVILGMGYKEN-VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 248 (355)
T ss_pred CCccccCCccccCCccCHHHHcCCCCCch-hhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHH
Confidence 44433445567899999999988777666 99999999999999999999876544333332222110
Q ss_pred ------cCCC------------------CCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhh
Q 022401 240 ------VQYS------------------VPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMF 290 (298)
Q Consensus 240 ------~~~~------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~ 290 (298)
.... .......+.++.+||.+||+.||++|||+.+++ +|||++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell--------~hp~~~ 315 (355)
T cd07874 249 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEAL--------QHPYIN 315 (355)
T ss_pred HHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHh--------cCcchh
Confidence 0000 001112356889999999999999999885555 667664
No 105
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=8.3e-43 Score=303.68 Aligned_cols=255 Identities=27% Similarity=0.448 Sum_probs=203.4
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC----CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEE
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG----DKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
++|++.+.||+|+||.||++++..+++.||+|++.+. ......+.+|..++..++|+||+++++++.+++.+|+|+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 4799999999999999999999989999999998752 222345778999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCC-
Q 022401 99 EYASGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ- 176 (298)
Q Consensus 99 ~~~~~~sL~~~l~~-~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~- 176 (298)
||+.+++|.+++.. ...+++..+..++.|++.||+|||++|++|+||||+||+++.++. ++|+|||++........
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~--~kl~Dfg~~~~~~~~~~~ 158 (331)
T cd05597 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGH--IRLADFGSCLRLLADGTV 158 (331)
T ss_pred ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCC--EEEEECCceeecCCCCCc
Confidence 99999999999976 457899999999999999999999999999999999999998887 99999998864433222
Q ss_pred -CCCCCCCCcccCcccccc----ccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCC--CCC-CCC
Q 022401 177 -PKSTVGTPAYIAPEVLLR----HEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQY--SVP-DTN 248 (298)
Q Consensus 177 -~~~~~~~~~~~aPE~~~~----~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~-~~~ 248 (298)
.....+++.|+|||++.. ......++||||+||++|+|++|..||...+..+ ....+..... ..+ ...
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~----~~~~i~~~~~~~~~~~~~~ 234 (331)
T cd05597 159 QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE----TYGKIMNHKEHFQFPPDVT 234 (331)
T ss_pred cccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHH----HHHHHHcCCCcccCCCccC
Confidence 122458899999999863 2223445999999999999999999998755432 2333332221 222 223
Q ss_pred CCCHHHHHHHHHhhhhCCCC--cccccccchhhhHHHhhhhhhhh
Q 022401 249 PISQECRDLISRIFVADPAA--VSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 249 ~~~~~l~~li~~~l~~dp~~--Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
.+++++.+++++||..++.+ |+++ .++++|||+.+
T Consensus 235 ~~~~~~~~li~~ll~~~~~r~~r~~~--------~~~l~hp~~~~ 271 (331)
T cd05597 235 DVSEEAKDLIRRLICSPETRLGRNGL--------QDFKDHPFFEG 271 (331)
T ss_pred CCCHHHHHHHHHHccCcccccCCCCH--------HHHhcCCCCCC
Confidence 47899999999998653333 6655 67778888864
No 106
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=2e-42 Score=291.53 Aligned_cols=257 Identities=29% Similarity=0.460 Sum_probs=214.2
Q ss_pred eccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEeccCCCCH
Q 022401 31 IGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 106 (298)
Q Consensus 31 lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~~~sL 106 (298)
||.|++|.||++.+..+++.+++|++.... ...+.+.+|+.++++++|||++++++.+.+++.+++++||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 689999999999999889999999987543 3345688999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCCCCCCCCCcc
Q 022401 107 FERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAY 186 (298)
Q Consensus 107 ~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~ 186 (298)
.+.+.....++...+..++.+++.||++||++|++|+||+|+||+++.++. ++|+|||++.............++..|
T Consensus 81 ~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~--~~l~df~~~~~~~~~~~~~~~~~~~~~ 158 (262)
T cd05572 81 WTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGY--VKLVDFGFAKKLKSGQKTWTFCGTPEY 158 (262)
T ss_pred HHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCC--EEEeeCCcccccCcccccccccCCcCc
Confidence 999988888999999999999999999999999999999999999998887 999999988755443333344578889
Q ss_pred cCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhhhhCC
Q 022401 187 IAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIFVADP 266 (298)
Q Consensus 187 ~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp 266 (298)
++||.+....++.+ +|+||+|+++|++++|..||...... ..+....+..+......+...++++.+++.+||+.||
T Consensus 159 ~~PE~~~~~~~~~~-~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p 235 (262)
T cd05572 159 VAPEIILNKGYDFS-VDYWSLGILLYELLTGRPPFGEDDED--PMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNP 235 (262)
T ss_pred cChhHhcCCCCCCh-hhhhhhHHHHHHHHhCCCCcCCCCCC--HHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCCh
Confidence 99999877777665 99999999999999999999876531 1333444443333334444468999999999999999
Q ss_pred CCcccccccchhhhHHHhhhhhhhhhhhhcC
Q 022401 267 AAVSIFFFPLNMSCLLLFSFVWMFDATENYH 297 (298)
Q Consensus 267 ~~Rps~~~~l~~~~~~~~~hp~~~~~~~~~~ 297 (298)
++||+..+. ...++++|||+.+ .+|+
T Consensus 236 ~~R~~~~~~---~~~~l~~~~~~~~--~~~~ 261 (262)
T cd05572 236 EERLGNLKG---GIKDIKKHKWFNG--FDWE 261 (262)
T ss_pred hhCcCCccc---CHHHHhcChhhhC--CCCC
Confidence 999985442 3588889999986 4775
No 107
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=7.4e-43 Score=293.51 Aligned_cols=254 Identities=28% Similarity=0.426 Sum_probs=214.2
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEe
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVME 99 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~ 99 (298)
+|++.+.||.|++|.||.+.+..++..+++|.+.... .....+.+|++++++++|||++++++++..+...++|++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 5899999999999999999999889999999987542 334678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCCCC
Q 022401 100 YASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS 179 (298)
Q Consensus 100 ~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~~~ 179 (298)
|+.+++|...+....++++.++..++.+++.+|.|||++|++|+||+|+||+++.++. ++|+|||++...........
T Consensus 81 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~--~~l~d~~~~~~~~~~~~~~~ 158 (258)
T cd05578 81 LLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGH--VHITDFNIATKVTPDTLTTS 158 (258)
T ss_pred CCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCC--EEEeecccccccCCCccccc
Confidence 9999999999988788999999999999999999999999999999999999998887 99999998875554444445
Q ss_pred CCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHH
Q 022401 180 TVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLIS 259 (298)
Q Consensus 180 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (298)
..++..|+|||.+.+..++.+ +|+||+|+++|++++|..||...... ........... .....+..++.++.++|.
T Consensus 159 ~~~~~~y~~PE~~~~~~~~~~-~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~ 234 (258)
T cd05578 159 TSGTPGYMAPEVLCRQGYSVA-VDWWSLGVTAYECLRGKRPYRGHSRT-IRDQIRAKQET--ADVLYPATWSTEAIDAIN 234 (258)
T ss_pred cCCChhhcCHHHHcccCCCCc-ccchhhHHHHHHHHhCCCCCCCCCcc-HHHHHHHHhcc--ccccCcccCcHHHHHHHH
Confidence 667888999999877776555 99999999999999999999876642 11222222221 222333447899999999
Q ss_pred HhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 260 RIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 260 ~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
+||+.||.+||++. ..++++|||+
T Consensus 235 ~~l~~~p~~R~~~~------~~~l~~~~~~ 258 (258)
T cd05578 235 KLLERDPQKRLGDN------LKDLKNHPYF 258 (258)
T ss_pred HHccCChhHcCCcc------HHHHhcCCCC
Confidence 99999999999884 4667788885
No 108
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-45 Score=307.07 Aligned_cols=256 Identities=28% Similarity=0.416 Sum_probs=216.7
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC--cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEe
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD--KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVME 99 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~ 99 (298)
...|...+.||.|.||.||+|.+..+++.||+|++..+. ...+.+.+|+.++.+++++||.+.++.+..+..++++||
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMe 91 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIME 91 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHH
Confidence 346888999999999999999999999999999998754 334678999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccC-CCCCC
Q 022401 100 YASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL-HSQPK 178 (298)
Q Consensus 100 ~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~-~~~~~ 178 (298)
|+.||++.+++..+..+++..+..++++++.|+.|||..+.+|+|||+.||++..+|. +||+|||++..... .....
T Consensus 92 y~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~--vkl~DfgVa~ql~~~~~rr~ 169 (467)
T KOG0201|consen 92 YCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGD--VKLADFGVAGQLTNTVKRRK 169 (467)
T ss_pred HhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCc--EEEEecceeeeeechhhccc
Confidence 9999999999988888899999999999999999999999999999999999998887 99999998853333 23336
Q ss_pred CCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHh-hcCCCCCCCCCCCHHHHHH
Q 022401 179 STVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRIL-SVQYSVPDTNPISQECRDL 257 (298)
Q Consensus 179 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l 257 (298)
...|++.|||||++....|+.+ +||||||++.+||++|.+|+........ +.-|- +.++.+ ...++..+++|
T Consensus 170 tfvGTPfwMAPEVI~~~~Y~~K-ADIWSLGITaiEla~GePP~s~~hPmrv----lflIpk~~PP~L--~~~~S~~~kEF 242 (467)
T KOG0201|consen 170 TFVGTPFWMAPEVIKQSGYDTK-ADIWSLGITAIELAKGEPPHSKLHPMRV----LFLIPKSAPPRL--DGDFSPPFKEF 242 (467)
T ss_pred cccccccccchhhhccccccch-hhhhhhhHHHHHHhcCCCCCcccCcceE----EEeccCCCCCcc--ccccCHHHHHH
Confidence 7789999999999998889888 9999999999999999999987654110 00011 112222 22588999999
Q ss_pred HHHhhhhCCCCcccccccchhhhHHHhhhhhhhhhhh
Q 022401 258 ISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDATE 294 (298)
Q Consensus 258 i~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~~~ 294 (298)
|..||++||+.||++. .++.|+|+....|
T Consensus 243 V~~CL~k~P~~RpsA~--------~LLKh~FIk~a~k 271 (467)
T KOG0201|consen 243 VEACLDKNPEFRPSAK--------ELLKHKFIKRAKK 271 (467)
T ss_pred HHHHhhcCcccCcCHH--------HHhhhHHHHhcCC
Confidence 9999999999999884 4556777765443
No 109
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.7e-42 Score=305.63 Aligned_cols=257 Identities=25% Similarity=0.398 Sum_probs=203.2
Q ss_pred CCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC---CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeC-----
Q 022401 20 HDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG---DKIDENVQREIINHRSLRHPNIVRFKEVILTP----- 91 (298)
Q Consensus 20 ~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 91 (298)
...++|++.+.||+|+||.||.+.+..+++.+|+|++... ......+.+|+.+++.++||||+++++++...
T Consensus 21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~ 100 (364)
T cd07875 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 100 (364)
T ss_pred chhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence 3468999999999999999999999989999999998653 23345677899999999999999999987543
Q ss_pred -CeEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCcccc
Q 022401 92 -THLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKS 170 (298)
Q Consensus 92 -~~~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~ 170 (298)
..+|+|+||+++ +|...+.. .++...+..++.|++.||+|||++|++||||||+||+++.++. ++|+|||++..
T Consensus 101 ~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~--~kL~DfG~a~~ 175 (364)
T cd07875 101 FQDVYIVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT--LKILDFGLART 175 (364)
T ss_pred cCeEEEEEeCCCC-CHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCc--EEEEeCCCccc
Confidence 357999999965 67666643 4788999999999999999999999999999999999998887 99999999875
Q ss_pred ccCCCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhh-----------
Q 022401 171 SVLHSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILS----------- 239 (298)
Q Consensus 171 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~----------- 239 (298)
...........++..|+|||++.+..++.+ +|||||||++|+|++|..||...+..+........+..
T Consensus 176 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~-~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (364)
T cd07875 176 AGTSFMMTPYVVTRYYRAPEVILGMGYKEN-VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP 254 (364)
T ss_pred cCCCCcccCCcccCCcCCHHHHhCCCCCch-hhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhH
Confidence 544433344567899999999988777666 99999999999999999999876654443333221110
Q ss_pred -------cCC------------------CCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhh
Q 022401 240 -------VQY------------------SVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMF 290 (298)
Q Consensus 240 -------~~~------------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~ 290 (298)
... ........+.++++||.+||+.||.+|||+ .++++|||+.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~--------~e~L~hp~~~ 322 (364)
T cd07875 255 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV--------DEALQHPYIN 322 (364)
T ss_pred HHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCH--------HHHhcCcccc
Confidence 000 000011134678999999999999999988 4555777775
No 110
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=7.9e-43 Score=317.02 Aligned_cols=258 Identities=24% Similarity=0.348 Sum_probs=199.1
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCC------CCeeeeeEEEEeC-Ce
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRH------PNIVRFKEVILTP-TH 93 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~-~~ 93 (298)
..++|++.+.||+|+||.||++.+..+++.||||++............|+.+++.++| .+++++++++..+ ..
T Consensus 127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~ 206 (467)
T PTZ00284 127 STQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGH 206 (467)
T ss_pred CCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCce
Confidence 4578999999999999999999999899999999987654444556667777776654 4588999988765 57
Q ss_pred EEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhh-cCcEEecCCCCceEeeCCCC--------------C
Q 022401 94 LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA-MQVCHRDLKLENTLLDGSPA--------------P 158 (298)
Q Consensus 94 ~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~-~~i~H~dl~p~nilv~~~~~--------------~ 158 (298)
+|+|++++ +++|.+++...+.+++..+..++.|++.||+|||+ .||+||||||+||+++.++. .
T Consensus 207 ~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~ 285 (467)
T PTZ00284 207 MCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPC 285 (467)
T ss_pred EEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCc
Confidence 89999988 66888888888889999999999999999999997 59999999999999986552 2
Q ss_pred CEEEeecCccccccCCCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHh
Q 022401 159 RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRIL 238 (298)
Q Consensus 159 ~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~ 238 (298)
.+||+|||.+.... .......+++.|+|||++.+..++.+ +|||||||++|||++|..||...+..+.+... .+..
T Consensus 286 ~vkl~DfG~~~~~~--~~~~~~~gt~~Y~APE~~~~~~~~~~-~DiwSlGvil~elltG~~pf~~~~~~~~~~~i-~~~~ 361 (467)
T PTZ00284 286 RVRICDLGGCCDER--HSRTAIVSTRHYRSPEVVLGLGWMYS-TDMWSMGCIIYELYTGKLLYDTHDNLEHLHLM-EKTL 361 (467)
T ss_pred eEEECCCCccccCc--cccccccCCccccCcHHhhcCCCCcH-HHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH-HHHc
Confidence 48999999875322 22234568899999999988887666 99999999999999999999876653332221 1111
Q ss_pred hcC----------------------CC--C------------CC-CCCCCHHHHHHHHHhhhhCCCCcccccccchhhhH
Q 022401 239 SVQ----------------------YS--V------------PD-TNPISQECRDLISRIFVADPAAVSIFFFPLNMSCL 281 (298)
Q Consensus 239 ~~~----------------------~~--~------------~~-~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~ 281 (298)
... .. . +. ....++.+.+||.+||..||.+|||+.|
T Consensus 362 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e------- 434 (467)
T PTZ00284 362 GRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQ------- 434 (467)
T ss_pred CCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHH-------
Confidence 100 00 0 00 0001356889999999999999998854
Q ss_pred HHhhhhhhhh
Q 022401 282 LLFSFVWMFD 291 (298)
Q Consensus 282 ~~~~hp~~~~ 291 (298)
+++|||+..
T Consensus 435 -~L~Hp~~~~ 443 (467)
T PTZ00284 435 -MTTHPYVLK 443 (467)
T ss_pred -HhcCccccc
Confidence 557777764
No 111
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3.7e-42 Score=312.95 Aligned_cols=252 Identities=30% Similarity=0.447 Sum_probs=207.1
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEccC-CcEEEEEEeecCCcc-hHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEe
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDKVT-KELVAVKYIERGDKI-DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVME 99 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~~~-~~~~aiK~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~ 99 (298)
...|.+.+.||.|++|.||.|.+..+ +..+++|.+...... ...+.+|+.+++.++||||+++++++..++.+++|||
T Consensus 66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E 145 (478)
T PTZ00267 66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIME 145 (478)
T ss_pred ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEE
Confidence 44599999999999999999998776 778899977554322 3456789999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC
Q 022401 100 YASGGELFERICN----AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS 175 (298)
Q Consensus 100 ~~~~~sL~~~l~~----~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~ 175 (298)
|+++++|.+.+.. ..++++.++..++.|++.||.|||++|++||||||+||+++.++. ++|+|||++.......
T Consensus 146 ~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~--~kL~DFgla~~~~~~~ 223 (478)
T PTZ00267 146 YGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGI--IKLGDFGFSKQYSDSV 223 (478)
T ss_pred CCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCc--EEEEeCcCceecCCcc
Confidence 9999999887743 446899999999999999999999999999999999999998887 9999999987543222
Q ss_pred ---CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCH
Q 022401 176 ---QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQ 252 (298)
Q Consensus 176 ---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (298)
......|++.|+|||++.+..++.+ +|||||||++|+|++|..||..... .+....+..+... +.+..++.
T Consensus 224 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~Dv~slG~~l~el~tg~~Pf~~~~~----~~~~~~~~~~~~~-~~~~~~s~ 297 (478)
T PTZ00267 224 SLDVASSFCGTPYYLAPELWERKRYSKK-ADMWSLGVILYELLTLHRPFKGPSQ----REIMQQVLYGKYD-PFPCPVSS 297 (478)
T ss_pred ccccccccCCCccccCHhHhCCCCCCcH-HhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHhCCCC-CCCccCCH
Confidence 1233458899999999887777655 9999999999999999999977543 2334444433332 23345789
Q ss_pred HHHHHHHHhhhhCCCCcccccccchhhhH
Q 022401 253 ECRDLISRIFVADPAAVSIFFFPLNMSCL 281 (298)
Q Consensus 253 ~l~~li~~~l~~dp~~Rps~~~~l~~~~~ 281 (298)
++.++|.+||+.||++||++.+++.+.+.
T Consensus 298 ~~~~li~~~L~~dP~~Rps~~~~l~~~~~ 326 (478)
T PTZ00267 298 GMKALLDPLLSKNPALRPTTQQLLHTEFL 326 (478)
T ss_pred HHHHHHHHHhccChhhCcCHHHHHhCHHH
Confidence 99999999999999999998777654443
No 112
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=4.2e-42 Score=292.35 Aligned_cols=255 Identities=23% Similarity=0.382 Sum_probs=204.2
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC--cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEec
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD--KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY 100 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~ 100 (298)
++|++.+.||+|++|.||++.+..++..+++|.+..+. .....+.+|+.++++++|||++++++++...+..++|+||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 46899999999999999999998899999999987642 2235688999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCCCCC
Q 022401 101 ASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST 180 (298)
Q Consensus 101 ~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~~~~ 180 (298)
+++++|... ..+++..+..++.|++.|+.|||+.|++|+||+|+||+++.++. ++|+|||++...... .....
T Consensus 81 ~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~--~~l~dfg~~~~~~~~-~~~~~ 153 (279)
T cd06619 81 MDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQ--VKLCDFGVSTQLVNS-IAKTY 153 (279)
T ss_pred CCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCC--EEEeeCCcceecccc-cccCC
Confidence 999988644 35688899999999999999999999999999999999998887 999999988644322 22334
Q ss_pred CCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchh---HHHHHHHHhhcCCCCCCCCCCCHHHHHH
Q 022401 181 VGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKD---FRKTIQRILSVQYSVPDTNPISQECRDL 257 (298)
Q Consensus 181 ~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (298)
.++..|+|||.+.+..++.+ +|+||||+++|+|++|..||........ .......+.............++++.++
T Consensus 154 ~~~~~y~aPE~~~~~~~~~~-~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 232 (279)
T cd06619 154 VGTNAYMAPERISGEQYGIH-SDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHF 232 (279)
T ss_pred CCChhhcCceeecCCCCCCc-chHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHH
Confidence 67889999999987777665 9999999999999999999975432111 1122222222222211223368899999
Q ss_pred HHHhhhhCCCCcccccccchhhhHHHhhhhhhhhhh
Q 022401 258 ISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDAT 293 (298)
Q Consensus 258 i~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~~ 293 (298)
+.+||+.||++||++ .++++|||++.-.
T Consensus 233 i~~~l~~~P~~Rp~~--------~eil~~~~~~~~~ 260 (279)
T cd06619 233 ITQCMRKQPKERPAP--------ENLMDHPFIVQYN 260 (279)
T ss_pred HHHHhhCChhhCCCH--------HHHhcCccccccc
Confidence 999999999999987 4555677776443
No 113
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=3.5e-42 Score=297.96 Aligned_cols=259 Identities=31% Similarity=0.476 Sum_probs=213.3
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc----chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEE
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK----IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
++|++.+.||+|++|.||.+.+..+++.+++|.+..... ....+.+|+++++.++|+||+++++.+.+....++++
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 479999999999999999999998899999999876532 3345778999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCC
Q 022401 99 EYASGGELFERICNA--GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ 176 (298)
Q Consensus 99 ~~~~~~sL~~~l~~~--~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~ 176 (298)
||+.+++|.+++... ..+++..++.++.|++.||.|||+.|++|+||+|+||+++.++. ++|+|||++........
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~--~~l~dfg~~~~~~~~~~ 158 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGH--IMLSDFDLSKQSDVEPP 158 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCC--EEEeecchhhccccccc
Confidence 999999999998754 46899999999999999999999999999999999999998877 99999998753322111
Q ss_pred ------------------------------CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCC
Q 022401 177 ------------------------------PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDE 226 (298)
Q Consensus 177 ------------------------------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 226 (298)
.....++..|+|||.+.+..++.+ +||||||+++|++++|..||...+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~-~Di~slG~ll~~l~~g~~pf~~~~~ 237 (316)
T cd05574 159 PVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSA-VDWWTLGILLYEMLYGTTPFKGSNR 237 (316)
T ss_pred ccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCch-HHHHHHHHHHHHHhhCCCCCCCCch
Confidence 012246778999999987776555 9999999999999999999987665
Q ss_pred chhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 227 PKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
...+ .++.......+.....+.++.+++.+||..||++|||.... ..++++|||+++.
T Consensus 238 ~~~~----~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~----~~~ll~~~~~~~~ 295 (316)
T cd05574 238 DETF----SNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRG----AAEIKQHPFFRGV 295 (316)
T ss_pred HHHH----HHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhh----HHHHHcCchhhcC
Confidence 3333 33334444444444478999999999999999999984333 2677789998874
No 114
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=4.2e-42 Score=293.05 Aligned_cols=257 Identities=26% Similarity=0.410 Sum_probs=206.4
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC---cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEe
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD---KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVME 99 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~ 99 (298)
++|++.+.||+|++|.||+++++.+++.+++|.+.... ...+.+.+|+.++++++|+|++++++++.....+++|+|
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 47999999999999999999999889999999886542 233567889999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC-CCC
Q 022401 100 YASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-QPK 178 (298)
Q Consensus 100 ~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~-~~~ 178 (298)
|+++++|.........+++..++.++.|++.+|.|||+.|++|+||+|+||+++.++. ++|+|||++....... ...
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~--~~l~dfg~~~~~~~~~~~~~ 158 (286)
T cd07847 81 YCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQ--IKLCDFGFARILTGPGDDYT 158 (286)
T ss_pred ccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCc--EEECccccceecCCCccccc
Confidence 9999888888777778999999999999999999999999999999999999998887 9999999887543332 222
Q ss_pred CCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhc---------------CCC
Q 022401 179 STVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSV---------------QYS 243 (298)
Q Consensus 179 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~---------------~~~ 243 (298)
...++..|+|||.+.+......++|+||+|+++++|++|..||......+............ ...
T Consensus 159 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07847 159 DYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLS 238 (286)
T ss_pred CcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccccccccc
Confidence 33467789999998765443445999999999999999999998766544332222211000 000
Q ss_pred CCC----------CCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 244 VPD----------TNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 244 ~~~----------~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
.+. ...++..+.+|+.+||+.||++|||+ .+++.|||+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~--------~eil~~~~f 286 (286)
T cd07847 239 IPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSC--------EELLEHPYF 286 (286)
T ss_pred CCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCH--------HHHhcCCCC
Confidence 000 12467889999999999999999987 556678875
No 115
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2.5e-42 Score=292.84 Aligned_cols=256 Identities=29% Similarity=0.454 Sum_probs=211.4
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC--cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEec
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD--KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY 100 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~ 100 (298)
++|++.+.||.|++|.||++.+..+++.+++|.+.... .....+.+|+.+++.++|+|++++.+++.++..+++|+|+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 47999999999999999999999899999999987643 2235678899999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC-CCCCC
Q 022401 101 ASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH-SQPKS 179 (298)
Q Consensus 101 ~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~-~~~~~ 179 (298)
+.+++|.+++... ++++..++.++.|++.++.+||+.+++|+||+|+||++++++. ++|+|||++...... .....
T Consensus 81 ~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~--~~l~d~g~~~~~~~~~~~~~~ 157 (274)
T cd06609 81 CGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGD--VKLADFGVSGQLTSTMSKRNT 157 (274)
T ss_pred eCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCC--EEEcccccceeeccccccccc
Confidence 9999999998765 7899999999999999999999999999999999999998887 999999998655433 22334
Q ss_pred CCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHH
Q 022401 180 TVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLIS 259 (298)
Q Consensus 180 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (298)
..++..|+|||.+.+..++.+ +|+||||+++|+|++|..||...+.. .....+............++.++.+++.
T Consensus 158 ~~~~~~y~~PE~~~~~~~~~~-sDv~slG~il~~l~tg~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 232 (274)
T cd06609 158 FVGTPFWMAPEVIKQSGYDEK-ADIWSLGITAIELAKGEPPLSDLHPM----RVLFLIPKNNPPSLEGNKFSKPFKDFVS 232 (274)
T ss_pred ccCCccccChhhhccCCCCch-hhHHHHHHHHHHHHhCCCCcccCchH----HHHHHhhhcCCCCCcccccCHHHHHHHH
Confidence 457778999999988776655 99999999999999999999765432 2222222222221122227899999999
Q ss_pred HhhhhCCCCcccccccchhhhHHHhhhhhhhhhhh
Q 022401 260 RIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDATE 294 (298)
Q Consensus 260 ~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~~~ 294 (298)
+||..||++|||+ .++++|||+.+..+
T Consensus 233 ~~l~~~p~~Rpt~--------~~il~~~~~~~~~~ 259 (274)
T cd06609 233 LCLNKDPKERPSA--------KELLKHKFIKKAKK 259 (274)
T ss_pred HHhhCChhhCcCH--------HHHhhChhhcCCCc
Confidence 9999999999987 55667999886544
No 116
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.8e-42 Score=295.07 Aligned_cols=245 Identities=20% Similarity=0.169 Sum_probs=201.4
Q ss_pred CCeeEE--eeeccCCeEEEEEEEEccCCcEEEEEEeecCCcch----HHHHHHHHHHhcCCCCCeeeeeEEEEe----CC
Q 022401 23 DRYDFV--RDIGSGNFGVARLMRDKVTKELVAVKYIERGDKID----ENVQREIINHRSLRHPNIVRFKEVILT----PT 92 (298)
Q Consensus 23 ~~y~~~--~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~ 92 (298)
++++.. ..+++|+++.||++.. +|+.||+|.+....... +.+.+|+.++++++||||+++++++.+ ..
T Consensus 18 ~~i~~~~~~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~ 95 (283)
T PHA02988 18 DDIDKYTSVLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLP 95 (283)
T ss_pred HHcCCCCCeEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCC
Confidence 334444 6789999999999988 58899999987654333 566799999999999999999999877 34
Q ss_pred eEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhh-cCcEEecCCCCceEeeCCCCCCEEEeecCccccc
Q 022401 93 HLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA-MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSS 171 (298)
Q Consensus 93 ~~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~-~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~ 171 (298)
.+++|+||+++++|.+++.....++......++.+++.|+.+||+ .+++|+||+|+||+++.++. +||+|||++...
T Consensus 96 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~--~kl~dfg~~~~~ 173 (283)
T PHA02988 96 RLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYK--LKIICHGLEKIL 173 (283)
T ss_pred ceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCc--EEEcccchHhhh
Confidence 789999999999999999888889999999999999999999998 49999999999999998887 999999987643
Q ss_pred cCCCCCCCCCCCCcccCcccccc--ccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCC
Q 022401 172 VLHSQPKSTVGTPAYIAPEVLLR--HEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNP 249 (298)
Q Consensus 172 ~~~~~~~~~~~~~~~~aPE~~~~--~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (298)
.. ......++..|+|||.+.+ ..++.+ +||||||+++|+|++|..||...+.. .....+.......+.+..
T Consensus 174 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~k-~Di~SlGvil~el~~g~~Pf~~~~~~----~~~~~i~~~~~~~~~~~~ 246 (283)
T PHA02988 174 SS--PPFKNVNFMVYFSYKMLNDIFSEYTIK-DDIYSLGVVLWEIFTGKIPFENLTTK----EIYDLIINKNNSLKLPLD 246 (283)
T ss_pred cc--ccccccCcccccCHHHhhhccccccch-hhhhHHHHHHHHHHHCCCCCCCCCHH----HHHHHHHhcCCCCCCCCc
Confidence 22 2234457788999999875 455555 99999999999999999999876542 333334334444444445
Q ss_pred CCHHHHHHHHHhhhhCCCCcccccccchh
Q 022401 250 ISQECRDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 250 ~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
.++++.+++.+||+.||.+|||+.+++..
T Consensus 247 ~~~~l~~li~~cl~~dp~~Rps~~ell~~ 275 (283)
T PHA02988 247 CPLEIKCIVEACTSHDSIKRPNIKEILYN 275 (283)
T ss_pred CcHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence 79999999999999999999999999853
No 117
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=5.9e-42 Score=287.46 Aligned_cols=250 Identities=30% Similarity=0.457 Sum_probs=207.3
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC---CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEec
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG---DKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY 100 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~ 100 (298)
+|++.+.||+|++|.||++.+..+++.+++|.+... ......+.+|+.++++++|||++++++++...+..++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 589999999999999999999989999999988653 33456678899999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCC-C
Q 022401 101 ASGGELFERICNA--GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ-P 177 (298)
Q Consensus 101 ~~~~sL~~~l~~~--~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~-~ 177 (298)
+++++|.+++... ..++...++.++.+++.|+.|||+.|++|+||+|+||+++.++. ++|+|||++........ .
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~--~~l~df~~~~~~~~~~~~~ 158 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDN--VKIGDLGVAKLLSDNTNFA 158 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCC--EEEcccccceeccCccchh
Confidence 9999999998764 56899999999999999999999999999999999999998887 99999998764433222 2
Q ss_pred CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHH
Q 022401 178 KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDL 257 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (298)
....+++.|+|||...+..++.+ +|+||||+++++|++|..||...+.. ....++...... +....++.++.++
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~ 232 (256)
T cd08529 159 NTIVGTPYYLSPELCEDKPYNEK-SDVWALGVVLYECCTGKHPFDANNQG----ALILKIIRGVFP-PVSQMYSQQLAQL 232 (256)
T ss_pred hccccCccccCHHHhcCCCCCCc-cchHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHcCCCC-CCccccCHHHHHH
Confidence 23457788999999988777665 99999999999999999999876532 223333333222 2222578999999
Q ss_pred HHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 258 ISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 258 i~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
+.+||+.+|++||++ .+++.|||+
T Consensus 233 i~~~l~~~p~~Rp~~--------~~ll~~~~~ 256 (256)
T cd08529 233 IDQCLTKDYRQRPDT--------FQLLRNPSL 256 (256)
T ss_pred HHHHccCCcccCcCH--------HHHhhCCCC
Confidence 999999999999988 455566764
No 118
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=3.9e-42 Score=290.52 Aligned_cols=250 Identities=33% Similarity=0.467 Sum_probs=205.8
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcc----------hHHHHHHHHHHhcCCCCCeeeeeEEEEeCCe
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKI----------DENVQREIINHRSLRHPNIVRFKEVILTPTH 93 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~----------~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 93 (298)
+|.+.+.||+|++|.||.|.+..+++.+++|.+...... .+.+.+|+.++++++||||+++++++.....
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 588999999999999999999888899999988653221 2457789999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccC
Q 022401 94 LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 173 (298)
Q Consensus 94 ~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~ 173 (298)
.++++||+++++|.+++.....+++..+..++.+++.|+++||+.|++|+||+|+||++++++. ++|+|||.+.....
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~--~~l~dfg~~~~~~~ 158 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGG--IKISDFGISKKLEA 158 (267)
T ss_pred cEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCC--EEecccCCCccccc
Confidence 9999999999999999988888999999999999999999999999999999999999998877 99999998864432
Q ss_pred CCC-------CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCC
Q 022401 174 HSQ-------PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPD 246 (298)
Q Consensus 174 ~~~-------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (298)
... .....++..|+|||.+.+..++.+ +|+||+|+++|++++|..||........ ...+... .....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~-~Dv~slG~il~~l~~g~~p~~~~~~~~~----~~~~~~~-~~~~~ 232 (267)
T cd06628 159 NSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRK-ADIWSLGCLVVEMLTGKHPFPDCTQLQA----IFKIGEN-ASPEI 232 (267)
T ss_pred ccccCCccccccccCCCcCccChhHhccCCCCch-hhhHHHHHHHHHHhhCCCCCCCccHHHH----HHHHhcc-CCCcC
Confidence 111 112346778999999887777655 9999999999999999999987654222 2222221 11222
Q ss_pred CCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 247 TNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 247 ~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
+..++.++.++|.+||+.||.+||++ .++++|||+
T Consensus 233 ~~~~~~~~~~li~~~l~~~p~~Rp~~--------~~il~~~~~ 267 (267)
T cd06628 233 PSNISSEAIDFLEKTFEIDHNKRPTA--------AELLKHPFL 267 (267)
T ss_pred CcccCHHHHHHHHHHccCCchhCcCH--------HHHhhCCCC
Confidence 34478999999999999999999987 555577775
No 119
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.5e-42 Score=303.55 Aligned_cols=255 Identities=24% Similarity=0.385 Sum_probs=198.6
Q ss_pred CCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEe
Q 022401 20 HDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVME 99 (298)
Q Consensus 20 ~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~ 99 (298)
....+|++++.||+|+||.||++.+..++..||+|+.... ....|+.++++++||||+++++++......++|++
T Consensus 63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-----~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 137 (357)
T PHA03209 63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-----TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP 137 (357)
T ss_pred hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-----ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence 3445799999999999999999999988999999975433 23568999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCCC
Q 022401 100 YASGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK 178 (298)
Q Consensus 100 ~~~~~sL~~~l~~-~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~~ 178 (298)
++.+ +|.+++.. ...+++..++.++.|++.||.|||+.|++||||||+||+++.++. ++|+|||++..........
T Consensus 138 ~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~--~kl~DfG~a~~~~~~~~~~ 214 (357)
T PHA03209 138 HYSS-DLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQ--VCIGDLGAAQFPVVAPAFL 214 (357)
T ss_pred ccCC-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCC--EEEecCccccccccCcccc
Confidence 9965 67777654 457899999999999999999999999999999999999998887 9999999886443333333
Q ss_pred CCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCC-CCCCCCc---------hhHHHHHHHHhhcCCCCC---
Q 022401 179 STVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYP-FEDPDEP---------KDFRKTIQRILSVQYSVP--- 245 (298)
Q Consensus 179 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~p-f~~~~~~---------~~~~~~~~~~~~~~~~~~--- 245 (298)
...++..|+|||++.+..++.+ +|||||||++|+|+++..| |...... ..+.............++
T Consensus 215 ~~~gt~~y~aPE~~~~~~~~~~-~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 293 (357)
T PHA03209 215 GLAGTVETNAPEVLARDKYNSK-ADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDP 293 (357)
T ss_pred cccccccccCCeecCCCCCCch-hhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCC
Confidence 4568899999999988877666 9999999999999986544 3332221 111111111110000000
Q ss_pred -------------------------CCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 246 -------------------------DTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 246 -------------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
...+++.++.+||.+||+.||.+|||+ .++++|||+++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta--------~e~l~hp~f~~ 356 (357)
T PHA03209 294 GSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSA--------EEILNYPMFAQ 356 (357)
T ss_pred ccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCH--------HHHhcCchhcc
Confidence 112356778889999999999999988 56668999875
No 120
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=6.9e-42 Score=311.64 Aligned_cols=253 Identities=29% Similarity=0.444 Sum_probs=206.8
Q ss_pred CCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC---cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCC----
Q 022401 20 HDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD---KIDENVQREIINHRSLRHPNIVRFKEVILTPT---- 92 (298)
Q Consensus 20 ~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 92 (298)
...++|++.+.||+|+||.||.+++..+++.||+|++.... .....+.+|+..+..++|+|++++++.+....
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 44589999999999999999999999999999999987543 22345778999999999999999988775432
Q ss_pred ----eEEEEEeccCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEee
Q 022401 93 ----HLAIVMEYASGGELFERICN----AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICD 164 (298)
Q Consensus 93 ----~~~lv~~~~~~~sL~~~l~~----~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d 164 (298)
.+++|+||+++++|.+.+.. ...+++..+..++.|++.||.|||+.|++||||||+||+++.++. ++|+|
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~--vkL~D 186 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGL--VKLGD 186 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCC--EEEEe
Confidence 36899999999999998854 346899999999999999999999999999999999999998887 99999
Q ss_pred cCccccccCC---CCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcC
Q 022401 165 FGYSKSSVLH---SQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQ 241 (298)
Q Consensus 165 ~~~~~~~~~~---~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 241 (298)
||++...... .......+++.|+|||.+.+..++.+ +||||||+++|+|++|..||...+. ......+....
T Consensus 187 FGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k-~DVwSlGvilyeLltG~~Pf~~~~~----~~~~~~~~~~~ 261 (496)
T PTZ00283 187 FGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKK-ADMFSLGVLLYELLTLKRPFDGENM----EEVMHKTLAGR 261 (496)
T ss_pred cccCeeccccccccccccccCCcceeCHHHhCCCCCCcH-HHHHHHHHHHHHHHHCCCCCCCCCH----HHHHHHHhcCC
Confidence 9998643321 22234568899999999988777665 9999999999999999999987543 33344444433
Q ss_pred CCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhh
Q 022401 242 YSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSC 280 (298)
Q Consensus 242 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~ 280 (298)
.. +.+..+++++.+++.+||+.||.+||++.+++++++
T Consensus 262 ~~-~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~ 299 (496)
T PTZ00283 262 YD-PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPI 299 (496)
T ss_pred CC-CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHH
Confidence 32 334558999999999999999999999866665543
No 121
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=9.5e-42 Score=294.23 Aligned_cols=255 Identities=27% Similarity=0.462 Sum_probs=205.3
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc--chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEec
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK--IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY 100 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~ 100 (298)
++|++.+.||+|+||.||++.+..++..+++|.+..... ....+.+|++++++++||||+++++++..++.+++++||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 479999999999999999999998999999998865422 235577899999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhh-cCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCCCC
Q 022401 101 ASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA-MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS 179 (298)
Q Consensus 101 ~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~-~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~~~ 179 (298)
+++++|.+++.....+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++. ++|+|||++...... ....
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~--~~l~dfg~~~~~~~~-~~~~ 157 (308)
T cd06615 81 MDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGE--IKLCDFGVSGQLIDS-MANS 157 (308)
T ss_pred cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCc--EEEccCCCccccccc-cccc
Confidence 9999999999888889999999999999999999997 59999999999999998887 999999987643222 2234
Q ss_pred CCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHH------------------------
Q 022401 180 TVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQ------------------------ 235 (298)
Q Consensus 180 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~------------------------ 235 (298)
..++..|+|||.+.+..++.+ +|+||||++++++++|..||...+. ........
T Consensus 158 ~~~~~~~~aPE~~~~~~~~~~-~DiwslG~~l~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (308)
T cd06615 158 FVGTRSYMSPERLQGTHYTVQ-SDIWSLGLSLVEMAIGRYPIPPPDA-KELEAMFGRPVSEGEAKESHRPVSGHPPDSPR 235 (308)
T ss_pred CCCCcCccChhHhcCCCCCcc-chHHHHHHHHHHHHhCCCCCCCcch-hhHHHhhcCccccccccCCcccccCCCCCccc
Confidence 457889999999877666555 9999999999999999999865432 11111111
Q ss_pred ---------HHhhcC-CCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 236 ---------RILSVQ-YSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 236 ---------~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
.+.... ...+ ...++.++.+++.+||+.||++|||+ .++++|||+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rpt~--------~~ll~~~~~~~ 292 (308)
T cd06615 236 PMAIFELLDYIVNEPPPKLP-SGAFSDEFQDFVDKCLKKNPKERADL--------KELTKHPFIKR 292 (308)
T ss_pred hhhHHHHHHHHhcCCCccCc-CcccCHHHHHHHHHHccCChhhCcCH--------HHHhcChhhhh
Confidence 000000 1111 11267899999999999999999987 55557777764
No 122
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=6e-42 Score=323.33 Aligned_cols=262 Identities=29% Similarity=0.468 Sum_probs=208.0
Q ss_pred CCCCCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC---cchHHHHHHHHHHhcCCCCCeeeeeEEEEeC-
Q 022401 16 MPIMHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD---KIDENVQREIINHRSLRHPNIVRFKEVILTP- 91 (298)
Q Consensus 16 ~~~~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~- 91 (298)
-+.....++|++++.||+|+||.||++++..++..+++|.+.... .....+..|+.++++++||||+++++++...
T Consensus 6 ~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~ 85 (1021)
T PTZ00266 6 DDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKA 85 (1021)
T ss_pred cCCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecC
Confidence 344455679999999999999999999999999999999887532 3345678899999999999999999998653
Q ss_pred -CeEEEEEeccCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHhhc-------CcEEecCCCCceEeeCC----
Q 022401 92 -THLAIVMEYASGGELFERICN----AGRFSEDEARFFFQQLISGVSYCHAM-------QVCHRDLKLENTLLDGS---- 155 (298)
Q Consensus 92 -~~~~lv~~~~~~~sL~~~l~~----~~~~~~~~~~~i~~~l~~~l~~Lh~~-------~i~H~dl~p~nilv~~~---- 155 (298)
..+|+||||+++++|.+++.. ...+++..++.|+.||+.||.|||+. +|+|+||||+|||++.+
T Consensus 86 ~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~l 165 (1021)
T PTZ00266 86 NQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHI 165 (1021)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccc
Confidence 578999999999999998864 35699999999999999999999984 49999999999999642
Q ss_pred -----------CCCCEEEeecCccccccCCCCCCCCCCCCcccCccccccc--cCCCCccchHHHHHHHHHHHhCCCCCC
Q 022401 156 -----------PAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRH--EYDGKIADVWSCGVTLYVMLVGGYPFE 222 (298)
Q Consensus 156 -----------~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~--~~~~~~~Di~slG~ll~~l~~g~~pf~ 222 (298)
+...++|+|||++.............+++.|+|||++.+. .++. ++|||||||++|+|++|..||.
T Consensus 166 g~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~-KSDVWSLG~ILYELLTGk~PF~ 244 (1021)
T PTZ00266 166 GKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDD-KSDMWALGCIIYELCSGKTPFH 244 (1021)
T ss_pred ccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCc-hhHHHHHHHHHHHHHHCCCCCC
Confidence 2334899999998755444434455689999999998643 3444 4999999999999999999998
Q ss_pred CCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 223 DPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
.......+. ..+.. ....+. ...+.++.+||..||+.+|.+||++.++ +.|||+..
T Consensus 245 ~~~~~~qli---~~lk~-~p~lpi-~~~S~eL~dLI~~~L~~dPeeRPSa~Ql--------L~h~~ik~ 300 (1021)
T PTZ00266 245 KANNFSQLI---SELKR-GPDLPI-KGKSKELNILIKNLLNLSAKERPSALQC--------LGYQIIKN 300 (1021)
T ss_pred cCCcHHHHH---HHHhc-CCCCCc-CCCCHHHHHHHHHHhcCChhHCcCHHHH--------hccHHHhh
Confidence 765433322 22222 222222 2368999999999999999999988554 56777653
No 123
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=6.1e-42 Score=292.01 Aligned_cols=255 Identities=25% Similarity=0.403 Sum_probs=201.7
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC---cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEec
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD---KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY 100 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~ 100 (298)
+|++.+.||+|++|.||++.+..++..|++|.+.... .....+.+|+.++++++|||++++++++.++..+++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 5899999999999999999999899999999886532 2235678899999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC-C
Q 022401 101 ASGGELFERICNA---GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-Q 176 (298)
Q Consensus 101 ~~~~sL~~~l~~~---~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~-~ 176 (298)
+. ++|.+++... ..+++..++.++.|++.||+|||+.|++|+||+|+||+++.++. ++|+|||++....... .
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~--~~l~dfg~~~~~~~~~~~ 157 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGV--IKLADFGLARAFGIPVRV 157 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCc--EEECcccceeecCCCccc
Confidence 97 5787777542 46899999999999999999999999999999999999998887 9999999886433221 1
Q ss_pred CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhc----------------
Q 022401 177 PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSV---------------- 240 (298)
Q Consensus 177 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~---------------- 240 (298)
.....+++.|+|||.+.+......++|+||||+++++|++|..||......+............
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (285)
T cd07861 158 YTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKN 237 (285)
T ss_pred ccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHh
Confidence 2233567889999988765544445999999999999999999998765433322222111000
Q ss_pred -------CCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 241 -------QYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 241 -------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
.........+++++.++|.+||+.||.+|||+ .+++.|||+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~--------~~ll~~~~~ 285 (285)
T cd07861 238 TFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISA--------KKALNHPYF 285 (285)
T ss_pred hccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCH--------HHHhcCCCC
Confidence 00000122378999999999999999999987 555577875
No 124
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=4.1e-42 Score=288.43 Aligned_cols=253 Identities=26% Similarity=0.431 Sum_probs=209.4
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEecc
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYA 101 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~ 101 (298)
.++|++.+.||+|++|.||++....++..+++|.+..... .+.+.+|+.++++++|+|++++++++.....+++++|++
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence 3689999999999999999999988889999999876543 678899999999999999999999999999999999999
Q ss_pred CCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC-CCCC
Q 022401 102 SGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-QPKS 179 (298)
Q Consensus 102 ~~~sL~~~l~~-~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~-~~~~ 179 (298)
++++|.+.+.. ...+++..+..++.+++.|+.|||+.+++|+||+|.||++++++. ++|+|||++....... ....
T Consensus 81 ~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~--~~l~dfg~~~~~~~~~~~~~~ 158 (256)
T cd06612 81 GAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQ--AKLADFGVSGQLTDTMAKRNT 158 (256)
T ss_pred CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCc--EEEcccccchhcccCcccccc
Confidence 99999999865 456899999999999999999999999999999999999998887 9999999887544332 2233
Q ss_pred CCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHH
Q 022401 180 TVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLIS 259 (298)
Q Consensus 180 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (298)
..++..|+|||++.+..++.+ +||||+|+++++|++|..||........... ...........+..++.++.+++.
T Consensus 159 ~~~~~~y~~PE~~~~~~~~~~-~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~ 234 (256)
T cd06612 159 VIGTPFWMAPEVIQEIGYNNK-ADIWSLGITAIEMAEGKPPYSDIHPMRAIFM---IPNKPPPTLSDPEKWSPEFNDFVK 234 (256)
T ss_pred ccCCccccCHHHHhcCCCCch-hhHHHHHHHHHHHHhCCCCCCCcchhhhhhh---hccCCCCCCCchhhcCHHHHHHHH
Confidence 446788999999887777655 9999999999999999999986543221111 111111222333457889999999
Q ss_pred HhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 260 RIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 260 ~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
+||+.||.+|||+ .+++.|||+
T Consensus 235 ~~l~~~P~~Rps~--------~~il~~~~~ 256 (256)
T cd06612 235 KCLVKDPEERPSA--------IQLLQHPFI 256 (256)
T ss_pred HHHhcChhhCcCH--------HHHhcCCCC
Confidence 9999999999987 556678875
No 125
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=3.2e-42 Score=293.68 Aligned_cols=255 Identities=27% Similarity=0.464 Sum_probs=199.8
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC---cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEec
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD---KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY 100 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~ 100 (298)
+|++.+.||.|++|.||++++..+|+.+++|.+.... .....+.+|+.++++++|||++++++++.+...+++++||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 5899999999999999999999899999999986532 2235577899999999999999999999999999999999
Q ss_pred cCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC-CCC
Q 022401 101 ASGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-QPK 178 (298)
Q Consensus 101 ~~~~sL~~~l~~-~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~-~~~ 178 (298)
+++ +|.+.+.. ...+++..++.++.|++.||.|||+.|++|+||+|+||+++.++. ++|+|||++....... ...
T Consensus 81 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~--~~l~dfg~~~~~~~~~~~~~ 157 (284)
T cd07839 81 CDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGE--LKLADFGLARAFGIPVRCYS 157 (284)
T ss_pred CCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCc--EEECccchhhccCCCCCCcC
Confidence 975 77776654 567899999999999999999999999999999999999998887 9999999886433221 122
Q ss_pred CCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcC----------------C
Q 022401 179 STVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQ----------------Y 242 (298)
Q Consensus 179 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~----------------~ 242 (298)
...++..|+|||.+.+....+.++||||||+++|+|++|..|+....+.........+..... .
T Consensus 158 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd07839 158 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPY 237 (284)
T ss_pred CCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhccccccc
Confidence 345678899999987765445559999999999999999988654443222211111111000 0
Q ss_pred -C-------CCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 243 -S-------VPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 243 -~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
. ......+++++.++|.+||+.||.+|||+. +++.|||+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~--------~il~h~~f 284 (284)
T cd07839 238 PMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAE--------EALQHPYF 284 (284)
T ss_pred CCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHH--------HHhcCCCC
Confidence 0 011124678999999999999999999884 55578885
No 126
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=1.4e-41 Score=292.78 Aligned_cols=257 Identities=29% Similarity=0.485 Sum_probs=210.8
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEE
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
++|++.+.||+|+||.||++.+..+++.|++|.+.... .....+.+|+.+++.++||||+++++++..+..+++|+
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 47999999999999999999999999999999887643 22345778999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC---
Q 022401 99 EYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS--- 175 (298)
Q Consensus 99 ~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~--- 175 (298)
|++++++|.+++.....+++..+..++.+++.|+.|||+.|++|+||+|+||+++.++. ++|+|||++.......
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~--~~l~dfg~~~~~~~~~~~~ 158 (305)
T cd05609 81 EYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGH--IKLTDFGLSKIGLMSLTTN 158 (305)
T ss_pred ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCC--EEEeeCCCccccCcCcccc
Confidence 99999999999988888999999999999999999999999999999999999998877 9999999875311110
Q ss_pred -------------CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCC
Q 022401 176 -------------QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQY 242 (298)
Q Consensus 176 -------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 242 (298)
......++..|+|||.+.+..++.+ +|+||||+++|++++|..||.+... .+..........
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~vl~el~~g~~pf~~~~~----~~~~~~~~~~~~ 233 (305)
T cd05609 159 LYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKP-VDWWAMGIILYEFLVGCVPFFGDTP----EELFGQVISDDI 233 (305)
T ss_pred ccccccccchhhccccCCccCccccCchhccCCCCCch-hhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHhccc
Confidence 0011235678999999877777655 9999999999999999999976543 233333333332
Q ss_pred CCCC-CCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 243 SVPD-TNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 243 ~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
..+. ...+++++.+++.+||+.||++||++. ..+++++|||+..
T Consensus 234 ~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~-----~~~~ll~~~~~~~ 278 (305)
T cd05609 234 EWPEGDEALPADAQDLISRLLRQNPLERLGTG-----GAFEVKQHRFFLG 278 (305)
T ss_pred CCCCccccCCHHHHHHHHHHhccChhhccCcc-----CHHHHHhCccccC
Confidence 2222 224789999999999999999999873 3467889999854
No 127
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=6.9e-42 Score=290.72 Aligned_cols=254 Identities=29% Similarity=0.373 Sum_probs=208.1
Q ss_pred eccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEeccCCCCH
Q 022401 31 IGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 106 (298)
Q Consensus 31 lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~~~sL 106 (298)
||+|+||.||.+.+..+|+.+++|.+.... .....+.+|+.++++++|||++++++++...+.+|+|+||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 689999999999999899999999986532 2234567899999999999999999999999999999999999999
Q ss_pred HHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCCCCCCCCC
Q 022401 107 FERICNAG--RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTP 184 (298)
Q Consensus 107 ~~~l~~~~--~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~ 184 (298)
.+.+.... .+++..+..++.|++.++.|||+.|++|+||+|+||+++.++. ++|+|||.+.............+..
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~--~~l~dfg~~~~~~~~~~~~~~~~~~ 158 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGN--VRISDLGLAVELKGGKKIKGRAGTP 158 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCC--EEEccCcchhhhccCCccccccCCC
Confidence 99987665 6899999999999999999999999999999999999998887 9999999886544433334455778
Q ss_pred cccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhhhh
Q 022401 185 AYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIFVA 264 (298)
Q Consensus 185 ~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~ 264 (298)
.|++||.+.+..++.+ +|+||+|+++++|++|..||...................... .+...++++.++|.+||+.
T Consensus 159 ~y~~PE~~~~~~~~~~-~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~ 235 (277)
T cd05577 159 GYMAPEVLQGEVYDFS-VDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVE--YPDKFSPEAKDLCEALLQK 235 (277)
T ss_pred CcCCHHHhcCCCCCch-hhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccccccc--CCccCCHHHHHHHHHHccC
Confidence 8999999877776555 999999999999999999998765433333333333332222 2334689999999999999
Q ss_pred CCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 265 DPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 265 dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
||.+||++.+.- ..++++|||+.+.
T Consensus 236 ~p~~R~~~~~~~---~~~ll~h~~~~~~ 260 (277)
T cd05577 236 DPEKRLGCRGGS---ADEVREHPLFKDL 260 (277)
T ss_pred ChhHccCCCccc---HHHHHhChhhhcC
Confidence 999999776622 3677889999643
No 128
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-44 Score=311.01 Aligned_cols=259 Identities=24% Similarity=0.318 Sum_probs=207.0
Q ss_pred CCCCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC---CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCe
Q 022401 17 PIMHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG---DKIDENVQREIINHRSLRHPNIVRFKEVILTPTH 93 (298)
Q Consensus 17 ~~~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 93 (298)
-+.+..+...+++.||+|.||+||++++.++ ||||.+... ....+.|++|+..+++-+|.||+-|.|++..+..
T Consensus 386 ~WeIp~~ev~l~~rIGsGsFGtV~Rg~whGd---VAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~ 462 (678)
T KOG0193|consen 386 EWEIPPEEVLLGERIGSGSFGTVYRGRWHGD---VAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL 462 (678)
T ss_pred ccccCHHHhhccceeccccccceeecccccc---eEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce
Confidence 3445557889999999999999999999854 899998753 4456789999999999999999999999987776
Q ss_pred EEEEEeccCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCcccccc
Q 022401 94 LAIVMEYASGGELFERICNAG-RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 172 (298)
Q Consensus 94 ~~lv~~~~~~~sL~~~l~~~~-~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~ 172 (298)
.+|+.+|.|.||..+++... +++..+...|++|+++|+.|||.++|+|+|||..|||+.+++. |||+|||++....
T Consensus 463 -AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~k--VkIgDFGLatvk~ 539 (678)
T KOG0193|consen 463 -AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLK--VKIGDFGLATVKT 539 (678)
T ss_pred -eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCc--EEEecccceeeee
Confidence 99999999999999997544 6899999999999999999999999999999999999998877 9999999986332
Q ss_pred C---CCCCCCCCCCCcccCccccccc--cCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCC
Q 022401 173 L---HSQPKSTVGTPAYIAPEVLLRH--EYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDT 247 (298)
Q Consensus 173 ~---~~~~~~~~~~~~~~aPE~~~~~--~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (298)
. ..+.....+...|||||+++-. ...++++||||||+++|||++|..||...+. +...-.+-+-....-.....
T Consensus 540 ~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~-dqIifmVGrG~l~pd~s~~~ 618 (678)
T KOG0193|consen 540 RWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNR-DQIIFMVGRGYLMPDLSKIR 618 (678)
T ss_pred eeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCCh-hheEEEecccccCccchhhh
Confidence 2 2333555678889999997632 3335559999999999999999999994433 32211111110011122334
Q ss_pred CCCCHHHHHHHHHhhhhCCCCcccccccchhhhHH
Q 022401 248 NPISQECRDLISRIFVADPAAVSIFFFPLNMSCLL 282 (298)
Q Consensus 248 ~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~ 282 (298)
.+.+.++.+|+..||++++++||++.++|.+.-+.
T Consensus 619 s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l 653 (678)
T KOG0193|consen 619 SNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEEL 653 (678)
T ss_pred ccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHh
Confidence 45788999999999999999999999999754333
No 129
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.6e-41 Score=286.06 Aligned_cols=257 Identities=29% Similarity=0.452 Sum_probs=215.4
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC--cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEec
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD--KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY 100 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~ 100 (298)
++|++.+.||.|++|.||++.+..+++.+++|.+.... .....+.+|+..+.+++|+|++++.+++...+.+++++||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 36999999999999999999999899999999987654 3456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhh-cCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCCC-
Q 022401 101 ASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA-MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK- 178 (298)
Q Consensus 101 ~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~-~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~~- 178 (298)
+++++|.+++.....+++..++.++.+++.++++||+ .|++|+||+|+||+++.++. ++|+|||++..........
T Consensus 81 ~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~--~~l~df~~~~~~~~~~~~~~ 158 (264)
T cd06623 81 MDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGE--VKIADFGISKVLENTLDQCN 158 (264)
T ss_pred cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCC--EEEccCccceecccCCCccc
Confidence 9999999999888889999999999999999999999 99999999999999998887 9999999887544333322
Q ss_pred CCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCC-CCHHHHHH
Q 022401 179 STVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNP-ISQECRDL 257 (298)
Q Consensus 179 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~l 257 (298)
...++..|+|||.+.+..++.+ +|+||||+++|++++|..||..... ....+....+..... ...... ++..+.++
T Consensus 159 ~~~~~~~y~~pE~~~~~~~~~~-~Dv~slG~il~~l~tg~~p~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l 235 (264)
T cd06623 159 TFVGTVTYMSPERIQGESYSYA-ADIWSLGLTLLECALGKFPFLPPGQ-PSFFELMQAICDGPP-PSLPAEEFSPEFRDF 235 (264)
T ss_pred ceeecccccCHhhhCCCCCCch-hhHHHHHHHHHHHHhCCCCCccccc-cCHHHHHHHHhcCCC-CCCCcccCCHHHHHH
Confidence 3456788999999877766555 9999999999999999999987653 122334444443222 222333 78999999
Q ss_pred HHHhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 258 ISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 258 i~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
|.+||+.+|.+|||+ .++++|||++..
T Consensus 236 i~~~l~~~p~~R~~~--------~~ll~~~~~~~~ 262 (264)
T cd06623 236 ISACLQKDPKKRPSA--------AELLQHPFIKKA 262 (264)
T ss_pred HHHHccCChhhCCCH--------HHHHhCHHHHhc
Confidence 999999999999987 666678988754
No 130
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=2.3e-42 Score=291.53 Aligned_cols=255 Identities=27% Similarity=0.487 Sum_probs=209.8
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC--cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEec
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD--KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY 100 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~ 100 (298)
++|++.+.||.|++|.||++.+..+++.+++|.+.... .....+.+|++++++++|||++++++++..++.+++++|+
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence 46899999999999999999999899999999987653 3345678899999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHhh-cCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCCC
Q 022401 101 ASGGELFERICNA-GRFSEDEARFFFQQLISGVSYCHA-MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK 178 (298)
Q Consensus 101 ~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~Lh~-~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~~ 178 (298)
+.+++|.+++... ..+++..+..++.+++.++++||+ .|++|+||+|+||+++.++. ++|+|||.+........ .
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~--~~l~d~g~~~~~~~~~~-~ 157 (265)
T cd06605 81 MDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQ--IKLCDFGVSGQLVNSLA-K 157 (265)
T ss_pred cCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCC--EEEeecccchhhHHHHh-h
Confidence 9999999999776 788999999999999999999999 99999999999999998876 99999998764432222 1
Q ss_pred CCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCC-chhHHHHHHHHhhcCCCCCCCCCCCHHHHHH
Q 022401 179 STVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDE-PKDFRKTIQRILSVQYSVPDTNPISQECRDL 257 (298)
Q Consensus 179 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (298)
...++..|+|||.+.+..++.+ +|+||+|++++++++|..||..... ........+.+............++.++.++
T Consensus 158 ~~~~~~~y~~PE~~~~~~~~~~-~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 236 (265)
T cd06605 158 TFVGTSSYMAPERIQGNDYSVK-SDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDF 236 (265)
T ss_pred cccCChhccCHHHHcCCCCCch-hhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHH
Confidence 2567788999999887777665 9999999999999999999976531 1222333444333322111111278899999
Q ss_pred HHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 258 ISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 258 i~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
|.+||+.||.+|||+ .+++.|||+
T Consensus 237 i~~~l~~~p~~Rpt~--------~~ll~~~~~ 260 (265)
T cd06605 237 VNLCLIKDPRERPSY--------KELLEHPFI 260 (265)
T ss_pred HHHHcCCCchhCcCH--------HHHhhCchh
Confidence 999999999999987 556688888
No 131
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.4e-42 Score=290.93 Aligned_cols=259 Identities=26% Similarity=0.379 Sum_probs=207.2
Q ss_pred CCCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc-chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEE
Q 022401 18 IMHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAI 96 (298)
Q Consensus 18 ~~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 96 (298)
.....++|++.+.||+|++|.||.+++..+++.+++|.+..... ....+.+|+.+++.++|||++++++++...+.+++
T Consensus 4 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~l 83 (267)
T cd06645 4 RRNPQEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWI 83 (267)
T ss_pred ccCcHHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEE
Confidence 34455789999999999999999999998999999999876532 23457789999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC-C
Q 022401 97 VMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH-S 175 (298)
Q Consensus 97 v~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~-~ 175 (298)
++||+++++|.+++...+.+++.+++.++.|++.|++|||+.|++|+||+|+||+++.++. ++|+|||++...... .
T Consensus 84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~--~~l~dfg~~~~~~~~~~ 161 (267)
T cd06645 84 CMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGH--VKLADFGVSAQITATIA 161 (267)
T ss_pred EEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCC--EEECcceeeeEccCccc
Confidence 9999999999999988888999999999999999999999999999999999999998877 999999987643322 2
Q ss_pred CCCCCCCCCcccCccccc---cccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCH
Q 022401 176 QPKSTVGTPAYIAPEVLL---RHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQ 252 (298)
Q Consensus 176 ~~~~~~~~~~~~aPE~~~---~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (298)
......++..|+|||.+. ...++. ++|+||||+++|+|++|..||............... ............++.
T Consensus 162 ~~~~~~~~~~y~aPE~~~~~~~~~~~~-~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 239 (267)
T cd06645 162 KRKSFIGTPYWMAPEVAAVERKGGYNQ-LCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKS-NFQPPKLKDKMKWSN 239 (267)
T ss_pred ccccccCcccccChhhhccccCCCCCc-hhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhcc-CCCCCcccccCCCCH
Confidence 223446788999999874 233444 599999999999999999998765432221111111 001111122224788
Q ss_pred HHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhh
Q 022401 253 ECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVW 288 (298)
Q Consensus 253 ~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~ 288 (298)
.+.+++.+||+.||++|||+ .++++|||
T Consensus 240 ~~~~li~~~l~~~P~~R~~~--------~~ll~~~~ 267 (267)
T cd06645 240 SFHHFVKMALTKNPKKRPTA--------EKLLQHPF 267 (267)
T ss_pred HHHHHHHHHccCCchhCcCH--------HHHhcCCC
Confidence 99999999999999999987 45557776
No 132
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.6e-41 Score=286.12 Aligned_cols=253 Identities=30% Similarity=0.462 Sum_probs=209.1
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc---chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEec
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK---IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY 100 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~ 100 (298)
+|++.+.||+|++|.||.+....+++.+++|.+..... ....+.+|+.++++++|+||+++++++...+.+++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 59999999999999999999988899999999876544 456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCCC--
Q 022401 101 ASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK-- 178 (298)
Q Consensus 101 ~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~~-- 178 (298)
+.+++|.+.+.....+++..+..++.+++.|+.|||+.|++|+||+|+||+++.++. ++|+|||++..........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~--~kl~d~g~~~~~~~~~~~~~~ 158 (264)
T cd06626 81 CSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGV--IKLGDFGCAVKLKNNTTTMGE 158 (264)
T ss_pred CCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCC--EEEcccccccccCCCCCcccc
Confidence 999999999988777899999999999999999999999999999999999998877 9999999887544332221
Q ss_pred ---CCCCCCcccCcccccccc---CCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCH
Q 022401 179 ---STVGTPAYIAPEVLLRHE---YDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQ 252 (298)
Q Consensus 179 ---~~~~~~~~~aPE~~~~~~---~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (298)
...++..|+|||.+.... ... ++||||+|++++++++|..||......... ............+....+++
T Consensus 159 ~~~~~~~~~~~~~PE~~~~~~~~~~~~-~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 235 (264)
T cd06626 159 EVQSLAGTPAYMAPEVITGGKGKGHGR-AADIWSLGCVVLEMATGKRPWSELDNEFQI--MFHVGAGHKPPIPDSLQLSP 235 (264)
T ss_pred cccCCcCCcCccChhhccCCCCCCCCc-ccchHHHHHHHHHHHhCCCCccCCcchHHH--HHHHhcCCCCCCCcccccCH
Confidence 235678899999987665 444 499999999999999999999765432211 11111122333444444689
Q ss_pred HHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 253 ECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 253 ~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
.+.+++.+||+.||.+|||+ .+++.|||+
T Consensus 236 ~~~~li~~~l~~~p~~R~~~--------~~i~~~~~~ 264 (264)
T cd06626 236 EGKDFLDRCLESDPKKRPTA--------SELLQHPFV 264 (264)
T ss_pred HHHHHHHHHccCCcccCCCH--------HHHhcCCCC
Confidence 99999999999999999987 555678875
No 133
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=9.8e-42 Score=286.34 Aligned_cols=252 Identities=29% Similarity=0.434 Sum_probs=207.7
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC------cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEE
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD------KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIV 97 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 97 (298)
+|+..+.||+|++|.||++....+++.+++|.+.... ...+.+.+|+.++++++|+|++++++++.....++++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 5888999999999999999998889999999886543 2345688899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCC
Q 022401 98 MEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP 177 (298)
Q Consensus 98 ~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~ 177 (298)
+||+++++|.+++.....+++..+..++.+++.++.+||+.|++|+||+|+||+++.++. ++|+|||++.........
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~--~kl~d~~~~~~~~~~~~~ 158 (258)
T cd06632 81 LELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGV--VKLADFGMAKQVVEFSFA 158 (258)
T ss_pred EEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCC--EEEccCccceeccccccc
Confidence 999999999999988888999999999999999999999999999999999999998877 999999988754444333
Q ss_pred CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHH
Q 022401 178 KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDL 257 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (298)
....++..|++||.+........++|+||+|+++|++++|..||......... ..+.........+..++.++.++
T Consensus 159 ~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l 234 (258)
T cd06632 159 KSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAV----FKIGRSKELPPIPDHLSDEAKDF 234 (258)
T ss_pred cccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHH----HHHHhcccCCCcCCCcCHHHHHH
Confidence 44557888999999876652334499999999999999999999876532221 11112111112233478999999
Q ss_pred HHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 258 ISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 258 i~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
+.+||+.||.+||++ .+++.|||+
T Consensus 235 i~~~l~~~p~~Rp~~--------~~~l~~~~~ 258 (258)
T cd06632 235 ILKCLQRDPSLRPTA--------AELLEHPFV 258 (258)
T ss_pred HHHHhhcCcccCcCH--------HHHhcCCCC
Confidence 999999999999987 555577775
No 134
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=8.2e-42 Score=288.60 Aligned_cols=250 Identities=22% Similarity=0.312 Sum_probs=204.0
Q ss_pred CCCCCeeEEeeeccCCeEEEEEEEEc---cCCcEEEEEEeecCC--cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeE
Q 022401 20 HDSDRYDFVRDIGSGNFGVARLMRDK---VTKELVAVKYIERGD--KIDENVQREIINHRSLRHPNIVRFKEVILTPTHL 94 (298)
Q Consensus 20 ~~~~~y~~~~~lg~g~~~~vy~~~~~---~~~~~~aiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 94 (298)
++.++|++.+.||+|+||.||.+... ..+..+|+|.+.... .....+.+|+..+++++||||+++++++..+...
T Consensus 2 i~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 81 (266)
T cd05064 2 LDNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTM 81 (266)
T ss_pred CchHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCc
Confidence 46678999999999999999999864 346689999887643 2235678899999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccC
Q 022401 95 AIVMEYASGGELFERICNA-GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 173 (298)
Q Consensus 95 ~lv~~~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~ 173 (298)
++||||+++++|.+++... ..+++..++.++.+++.|++|||+.|++|+||+|+||+++.++. ++++|||.+.....
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~--~~l~dfg~~~~~~~ 159 (266)
T cd05064 82 MIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLV--CKISGFRRLQEDKS 159 (266)
T ss_pred EEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCc--EEECCCcccccccc
Confidence 9999999999999998764 57899999999999999999999999999999999999998876 99999997653322
Q ss_pred CCC--CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCC
Q 022401 174 HSQ--PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPI 250 (298)
Q Consensus 174 ~~~--~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (298)
... .....++..|+|||.+.+..++.+ +||||||+++|++++ |..||......+. .+.+. .....+.+..+
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~~l~ell~~g~~p~~~~~~~~~----~~~~~-~~~~~~~~~~~ 233 (266)
T cd05064 160 EAIYTTMSGKSPVLWAAPEAIQYHHFSSA-SDVWSFGIVMWEVMSYGERPYWDMSGQDV----IKAVE-DGFRLPAPRNC 233 (266)
T ss_pred cchhcccCCCCceeecCHHHHhhCCccch-hHHHHHHHHHHHHhcCCCCCcCcCCHHHH----HHHHH-CCCCCCCCCCC
Confidence 211 112234567999999877777665 999999999999875 9999987654322 22222 22334455668
Q ss_pred CHHHHHHHHHhhhhCCCCcccccccch
Q 022401 251 SQECRDLISRIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 251 ~~~l~~li~~~l~~dp~~Rps~~~~l~ 277 (298)
|..+.+++.+||+.+|.+||++.+++.
T Consensus 234 ~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 234 PNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred CHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 999999999999999999999988875
No 135
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.8e-41 Score=290.26 Aligned_cols=259 Identities=26% Similarity=0.415 Sum_probs=209.1
Q ss_pred CCCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC-cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEE
Q 022401 18 IMHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD-KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAI 96 (298)
Q Consensus 18 ~~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 96 (298)
.....++|++++.||+|++|.||++++..++..+++|.+.... .....+.+|+.+++.++|||++++++++..++.+++
T Consensus 7 ~~~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (292)
T cd06644 7 DLDPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWI 86 (292)
T ss_pred ccCcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEE
Confidence 3445578999999999999999999999899999999987543 334567889999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC-
Q 022401 97 VMEYASGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH- 174 (298)
Q Consensus 97 v~~~~~~~sL~~~l~~-~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~- 174 (298)
|+||+++++|...+.+ ...+++..+..++.|++.++.+||+.|++|+||+|+||+++.++. ++|+|||++......
T Consensus 87 v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~--~kl~dfg~~~~~~~~~ 164 (292)
T cd06644 87 MIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGD--IKLADFGVSAKNVKTL 164 (292)
T ss_pred EEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCC--EEEccCccceeccccc
Confidence 9999999999887754 456899999999999999999999999999999999999988777 999999987643222
Q ss_pred CCCCCCCCCCcccCccccccc-----cCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhc-CCCCCCCC
Q 022401 175 SQPKSTVGTPAYIAPEVLLRH-----EYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSV-QYSVPDTN 248 (298)
Q Consensus 175 ~~~~~~~~~~~~~aPE~~~~~-----~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 248 (298)
.......++..|+|||.+.+. .++. ++|+||||+++|+|++|..||...+... ...++... ......+.
T Consensus 165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~-~~Dv~slG~il~el~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~ 239 (292)
T cd06644 165 QRRDSFIGTPYWMAPEVVMCETMKDTPYDY-KADIWSLGITLIEMAQIEPPHHELNPMR----VLLKIAKSEPPTLSQPS 239 (292)
T ss_pred cccceecCCccccCceeeccccccCCCCCc-hhhhHhHHHHHHHHhcCCCCCccccHHH----HHHHHhcCCCccCCCCc
Confidence 222334577889999987532 2333 4999999999999999999997754322 12222222 22333445
Q ss_pred CCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 249 PISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 249 ~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
.++.++.+++.+||+.||++||++ .++++|||+..
T Consensus 240 ~~~~~~~~li~~~l~~~p~~Rp~~--------~~il~~~~~~~ 274 (292)
T cd06644 240 KWSMEFRDFLKTALDKHPETRPSA--------AQLLEHPFVSS 274 (292)
T ss_pred ccCHHHHHHHHHHhcCCcccCcCH--------HHHhcCccccc
Confidence 578899999999999999999987 55567888864
No 136
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=7.4e-42 Score=293.45 Aligned_cols=262 Identities=24% Similarity=0.354 Sum_probs=208.7
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcc------hHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEE
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKI------DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIV 97 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~------~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 97 (298)
+|++.+.||+|++|.||++.+..+++.|++|.+...... ...+.+|+.++++++|+|++++++++.+....++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 589999999999999999999888999999998764322 34567899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC-
Q 022401 98 MEYASGGELFERICNAG-RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS- 175 (298)
Q Consensus 98 ~~~~~~~sL~~~l~~~~-~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~- 175 (298)
+||+ +++|.+++.... .+++..++.++.|++.||.|||+.|++|+||+|+||+++.++. ++|+|||++.......
T Consensus 81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~--~~l~dfg~~~~~~~~~~ 157 (298)
T cd07841 81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGV--LKLADFGLARSFGSPNR 157 (298)
T ss_pred Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCC--EEEccceeeeeccCCCc
Confidence 9999 889999997766 7999999999999999999999999999999999999998887 9999999886443322
Q ss_pred CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCC-------------
Q 022401 176 QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQY------------- 242 (298)
Q Consensus 176 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~------------- 242 (298)
......++..|+|||.+.+......++|+||||+++++|++|..||......+.+......+.....
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (298)
T cd07841 158 KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYV 237 (298)
T ss_pred cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccc
Confidence 2223345678999998866554455699999999999999998888766554433333222110000
Q ss_pred ------CC---CCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhhhhhc
Q 022401 243 ------SV---PDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDATENY 296 (298)
Q Consensus 243 ------~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~~~~~ 296 (298)
.. ......+.++.++|.+||+.||.+|||+ .++++|||+.+....|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~--------~e~l~~~~~~~~~~~~ 292 (298)
T cd07841 238 EFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITA--------RQALEHPYFSNDPAPT 292 (298)
T ss_pred cccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCH--------HHHhhCccccCCCCCC
Confidence 00 0012346889999999999999999987 5566799998755443
No 137
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=2.5e-41 Score=283.70 Aligned_cols=251 Identities=33% Similarity=0.517 Sum_probs=208.1
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC---cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEec
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD---KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY 100 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~ 100 (298)
+|++.+.||+|++|.||.+.+..++..+++|.+.... .....+.+|+.++++++|||++++++.+..++..++|+|+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 5999999999999999999998899999999987542 3345688999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCCC
Q 022401 101 ASGGELFERICNA--GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK 178 (298)
Q Consensus 101 ~~~~sL~~~l~~~--~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~~ 178 (298)
+++++|.+++... ..+++..+..++.+++.++++||++|++|+||+|+||+++.++. .++|+|||++..........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~-~~~l~d~~~~~~~~~~~~~~ 159 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKM-VVKIGDFGISKILSSKSKAY 159 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC-EEEEccCCCceecCCCcccc
Confidence 9999999999763 35899999999999999999999999999999999999976553 47999999987655444444
Q ss_pred CCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHH
Q 022401 179 STVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLI 258 (298)
Q Consensus 179 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (298)
...++..|+|||.+.+...+.+ +|+||+|++++++++|..||...+... ....+..... .+....++.++.+++
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~-~Dv~slG~~l~~l~~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~l~~li 233 (256)
T cd08220 160 TVVGTPCYISPELCEGKPYNQK-SDIWALGCVLYELASLKRAFEAANLPA----LVLKIMSGTF-APISDRYSPDLRQLI 233 (256)
T ss_pred ccccCCcccCchhccCCCCCcc-cchHHHHHHHHHHHhCCCCcccCchHH----HHHHHHhcCC-CCCCCCcCHHHHHHH
Confidence 5567889999999887766555 999999999999999999997765432 2222222222 122334789999999
Q ss_pred HHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 259 SRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 259 ~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
.+||+.||.+|||+ .++++|||+
T Consensus 234 ~~~l~~~p~~Rpt~--------~~ll~~p~~ 256 (256)
T cd08220 234 LSMLNLDPSKRPQL--------SQIMAQPIC 256 (256)
T ss_pred HHHccCChhhCCCH--------HHHhhCCCC
Confidence 99999999999988 555577775
No 138
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=9.7e-42 Score=297.11 Aligned_cols=256 Identities=25% Similarity=0.425 Sum_probs=204.7
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC----CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEE
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG----DKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
++|++.+.||+|+||.||+++.+.+++.+|+|++.+. ......+.+|..++..++|++|+++.+++.+...+++|+
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 4799999999999999999999989999999998642 222344778899999999999999999999999999999
Q ss_pred eccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCC-
Q 022401 99 EYASGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ- 176 (298)
Q Consensus 99 ~~~~~~sL~~~l~~-~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~- 176 (298)
||+.+++|.+++.. ...+++..+..++.|++.|++|||+.|++||||||+||+++.++. ++|+|||++........
T Consensus 81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~--~kL~DfG~a~~~~~~~~~ 158 (332)
T cd05623 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGH--IRLADFGSCLKLMEDGTV 158 (332)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCC--EEEeecchheecccCCcc
Confidence 99999999999976 457899999999999999999999999999999999999998887 99999998864322221
Q ss_pred -CCCCCCCCcccCcccccc----ccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCC--CCC-CC
Q 022401 177 -PKSTVGTPAYIAPEVLLR----HEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYS--VPD-TN 248 (298)
Q Consensus 177 -~~~~~~~~~~~aPE~~~~----~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~-~~ 248 (298)
.....+++.|+|||++.. ......++||||||+++|+|++|..||...+. .+...++...... .+. ..
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~----~~~~~~i~~~~~~~~~p~~~~ 234 (332)
T cd05623 159 QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESL----VETYGKIMNHKERFQFPAQVT 234 (332)
T ss_pred eecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCH----HHHHHHHhCCCccccCCCccc
Confidence 223468899999998863 22234449999999999999999999987554 3333444333322 221 23
Q ss_pred CCCHHHHHHHHHhhhhCCCC--cccccccchhhhHHHhhhhhhhhh
Q 022401 249 PISQECRDLISRIFVADPAA--VSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 249 ~~~~~l~~li~~~l~~dp~~--Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
.++.++.+++++||..++.+ |++ +.++++|||+.+.
T Consensus 235 ~~s~~~~~li~~ll~~~~~r~~r~~--------~~~~~~h~~f~~~ 272 (332)
T cd05623 235 DVSEDAKDLIRRLICSREHRLGQNG--------IEDFKQHPFFTGI 272 (332)
T ss_pred cCCHHHHHHHHHHccChhhhcCCCC--------HHHHhCCCCcCCC
Confidence 47899999999999765544 454 4777789988753
No 139
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.2e-41 Score=287.26 Aligned_cols=254 Identities=28% Similarity=0.411 Sum_probs=207.3
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC--cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEec
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD--KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY 100 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~ 100 (298)
++|++.+.||.|++|.||++....++..+++|++.... .....+.+|+..++.++|+|++++++.+..++.+++++++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 47999999999999999999998889999999986543 2446788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCC
Q 022401 101 ASGGELFERICNA---GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP 177 (298)
Q Consensus 101 ~~~~sL~~~l~~~---~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~ 177 (298)
+.+++|.+.+... ..+++..+..++.|++.|+.+||+.|++|+||+|+||++++++. ++|+|||++.........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~--~~l~df~~~~~~~~~~~~ 158 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGS--VKIADFGVSASLADGGDR 158 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCC--EEEcccchHHHhccCccc
Confidence 9999999998764 45899999999999999999999999999999999999998877 999999987644333222
Q ss_pred -----CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCC---CCC
Q 022401 178 -----KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPD---TNP 249 (298)
Q Consensus 178 -----~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 249 (298)
....++..|++||.+......+.++|+||||+++++|++|..||...+....+.+.... ....... ...
T Consensus 159 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 235 (267)
T cd06610 159 TRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQN---DPPSLETGADYKK 235 (267)
T ss_pred cccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcC---CCCCcCCcccccc
Confidence 22346788999999877633344599999999999999999999876553333332221 1112222 125
Q ss_pred CCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 250 ISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 250 ~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
+++++.+++.+||..||++||++ .++++|||+
T Consensus 236 ~~~~~~~li~~~l~~~p~~Rp~~--------~~ll~~p~~ 267 (267)
T cd06610 236 YSKSFRKMISLCLQKDPSKRPTA--------EELLKHKFF 267 (267)
T ss_pred ccHHHHHHHHHHcCCChhhCcCH--------HHHhhCCCC
Confidence 78999999999999999999987 666678885
No 140
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.8e-41 Score=288.83 Aligned_cols=255 Identities=27% Similarity=0.424 Sum_probs=210.8
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC-cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEec
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD-KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY 100 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~ 100 (298)
..+|++.+.||.|++|.||++.+..+++.+++|.+.... ...+.+.+|+.+++.++|||++++++++.....+++|+||
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 97 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEY 97 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEe
Confidence 367999999999999999999998899999999887543 2345678899999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC-CCCC
Q 022401 101 ASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-QPKS 179 (298)
Q Consensus 101 ~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~-~~~~ 179 (298)
+.+++|..++... .+++.++..++.+++.++.+||+.|++|+||+|+||+++.++. ++|+|||++....... ....
T Consensus 98 ~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~--~kl~dfg~~~~~~~~~~~~~~ 174 (296)
T cd06655 98 LAGGSLTDVVTET-CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGS--VKLTDFGFCAQITPEQSKRST 174 (296)
T ss_pred cCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCC--EEEccCccchhcccccccCCC
Confidence 9999999988654 5899999999999999999999999999999999999998877 9999999876433222 1223
Q ss_pred CCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHH
Q 022401 180 TVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLIS 259 (298)
Q Consensus 180 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (298)
..++..|+|||.+.+..++.+ +|+||||+++|++++|..||...+........ ..........+..+++.+.++|+
T Consensus 175 ~~~~~~y~aPE~~~~~~~~~~-~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~li~ 250 (296)
T cd06655 175 MVGTPYWMAPEVVTRKAYGPK-VDIWSLGIMAIEMVEGEPPYLNENPLRALYLI---ATNGTPELQNPEKLSPIFRDFLN 250 (296)
T ss_pred cCCCccccCcchhcCCCCCch-hhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---HhcCCcccCCcccCCHHHHHHHH
Confidence 457788999999887777665 99999999999999999999876543222211 11222233344558899999999
Q ss_pred HhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 260 RIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 260 ~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
+||..||.+|||+ .+++.|||+..
T Consensus 251 ~~l~~dp~~Rpt~--------~~il~~~~~~~ 274 (296)
T cd06655 251 RCLEMDVEKRGSA--------KELLQHPFLKL 274 (296)
T ss_pred HHhhcChhhCCCH--------HHHhhChHhhh
Confidence 9999999999987 56668888875
No 141
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=5.3e-42 Score=303.03 Aligned_cols=253 Identities=22% Similarity=0.340 Sum_probs=202.5
Q ss_pred CCCCCeeEEeeeccCCeEEEEEEEEcc-----CCcEEEEEEeecCCc--chHHHHHHHHHHhcC-CCCCeeeeeEEEEeC
Q 022401 20 HDSDRYDFVRDIGSGNFGVARLMRDKV-----TKELVAVKYIERGDK--IDENVQREIINHRSL-RHPNIVRFKEVILTP 91 (298)
Q Consensus 20 ~~~~~y~~~~~lg~g~~~~vy~~~~~~-----~~~~~aiK~~~~~~~--~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~ 91 (298)
...++|++.+.||+|+||.||++++.. ++..||+|.+..... ..+.+.+|+.+++.+ +|+||+++++++...
T Consensus 35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~ 114 (374)
T cd05106 35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHG 114 (374)
T ss_pred ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCC
Confidence 455789999999999999999998643 335799999875432 235678899999999 899999999999999
Q ss_pred CeEEEEEeccCCCCHHHHHHhC----------------------------------------------------------
Q 022401 92 THLAIVMEYASGGELFERICNA---------------------------------------------------------- 113 (298)
Q Consensus 92 ~~~~lv~~~~~~~sL~~~l~~~---------------------------------------------------------- 113 (298)
..+++|+||+++++|.+++...
T Consensus 115 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (374)
T cd05106 115 GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQS 194 (374)
T ss_pred CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccc
Confidence 9999999999999999887532
Q ss_pred ------------CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCC---CC
Q 022401 114 ------------GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ---PK 178 (298)
Q Consensus 114 ------------~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~---~~ 178 (298)
.+++...++.++.|++.||.|||++|++||||||+||+++.++. ++|+|||++........ ..
T Consensus 195 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~--~kL~DfGla~~~~~~~~~~~~~ 272 (374)
T cd05106 195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRV--AKICDFGLARDIMNDSNYVVKG 272 (374)
T ss_pred ccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCe--EEEeeceeeeeccCCcceeecc
Confidence 13678889999999999999999999999999999999998776 99999999864332211 11
Q ss_pred CCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHH
Q 022401 179 STVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDL 257 (298)
Q Consensus 179 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (298)
...++..|+|||++.+..++.+ +||||||+++|+|++ |..||............ .........+...+.++.++
T Consensus 273 ~~~~~~~y~aPE~~~~~~~~~~-~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~l 347 (374)
T cd05106 273 NARLPVKWMAPESIFDCVYTVQ-SDVWSYGILLWEIFSLGKSPYPGILVNSKFYKM----VKRGYQMSRPDFAPPEIYSI 347 (374)
T ss_pred CCCCccceeCHHHhcCCCCCcc-ccHHHHHHHHHHHHhCCCCCCccccccHHHHHH----HHcccCccCCCCCCHHHHHH
Confidence 2234567999999877777665 999999999999997 99999875543322222 22223333344468999999
Q ss_pred HHHhhhhCCCCcccccccchhh
Q 022401 258 ISRIFVADPAAVSIFFFPLNMS 279 (298)
Q Consensus 258 i~~~l~~dp~~Rps~~~~l~~~ 279 (298)
+.+||+.||.+|||+.+++++.
T Consensus 348 i~~cl~~dp~~RPs~~~l~~~l 369 (374)
T cd05106 348 MKMCWNLEPTERPTFSQISQLI 369 (374)
T ss_pred HHHHcCCChhhCcCHHHHHHHH
Confidence 9999999999999999988754
No 142
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=9.2e-42 Score=288.98 Aligned_cols=253 Identities=25% Similarity=0.392 Sum_probs=204.6
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcC-CCCCeeeeeEEEEeC------CeE
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSL-RHPNIVRFKEVILTP------THL 94 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~------~~~ 94 (298)
.+.|++.+.||+|+||.||++....+++.+|+|++.........+.+|+.+++++ +|+|++++++++... ..+
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 84 (272)
T cd06637 5 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQL 84 (272)
T ss_pred hhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEE
Confidence 4679999999999999999999998999999999987766667788999999998 699999999998753 468
Q ss_pred EEEEeccCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCcccccc
Q 022401 95 AIVMEYASGGELFERICNA--GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 172 (298)
Q Consensus 95 ~lv~~~~~~~sL~~~l~~~--~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~ 172 (298)
++++||+.+++|.+++... ..+++..+..++.|++.|++|||+++++|+||+|+||+++.++. ++|+|||++....
T Consensus 85 ~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~--~~l~Dfg~~~~~~ 162 (272)
T cd06637 85 WLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAE--VKLVDFGVSAQLD 162 (272)
T ss_pred EEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCC--EEEccCCCceecc
Confidence 9999999999999998763 36889999999999999999999999999999999999998887 9999999986433
Q ss_pred CC-CCCCCCCCCCcccCccccccc-----cCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCC
Q 022401 173 LH-SQPKSTVGTPAYIAPEVLLRH-----EYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPD 246 (298)
Q Consensus 173 ~~-~~~~~~~~~~~~~aPE~~~~~-----~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (298)
.. .......++..|+|||.+... .++. ++|+||+|+++|+|++|..||....... .. ............
T Consensus 163 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~-~~Dv~slGv~l~el~~g~~p~~~~~~~~---~~-~~~~~~~~~~~~ 237 (272)
T cd06637 163 RTVGRRNTFIGTPYWMAPEVIACDENPDATYDF-KSDLWSLGITAIEMAEGAPPLCDMHPMR---AL-FLIPRNPAPRLK 237 (272)
T ss_pred cccccCCcccccccccCHhHhccccCcCCCCCc-hhhHHHHHHHHHHHHhCCCCccccCHHH---HH-HHHhcCCCCCCC
Confidence 22 223345578889999987632 3444 4999999999999999999997644221 11 111122222223
Q ss_pred CCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 247 TNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 247 ~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
...++.++.+|+.+||..||.+|||+ .+++.|||+
T Consensus 238 ~~~~~~~~~~li~~~l~~~p~~Rpt~--------~~il~~~~~ 272 (272)
T cd06637 238 SKKWSKKFQSFIESCLVKNHSQRPTT--------EQLMKHPFI 272 (272)
T ss_pred CCCcCHHHHHHHHHHcCCChhhCCCH--------HHHhhCCCC
Confidence 33578999999999999999999987 555578875
No 143
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1.2e-41 Score=290.30 Aligned_cols=256 Identities=26% Similarity=0.390 Sum_probs=207.1
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC---cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEec
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD---KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY 100 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~ 100 (298)
+|++.+.||+|++|.||+|.+..+|+.+++|++.... .....+.+|+.++++++|||++++++++.....+++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 5999999999999999999998889999999987543 2345788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC--CC
Q 022401 101 ASGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS--QP 177 (298)
Q Consensus 101 ~~~~sL~~~l~~-~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~--~~ 177 (298)
+ +++|.+.+.. ...+++.+++.++.|++.+|.|||+.|++|+||+|+||+++.++. ++|+|||++....... ..
T Consensus 81 ~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~--~~l~dfg~~~~~~~~~~~~~ 157 (286)
T cd07832 81 M-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGV--LKIADFGLARLFSEEEPRLY 157 (286)
T ss_pred c-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCc--EEEeeeeecccccCCCCCcc
Confidence 9 9999998854 456899999999999999999999999999999999999998877 9999999887544332 12
Q ss_pred CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCC---------------
Q 022401 178 KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQY--------------- 242 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~--------------- 242 (298)
....++..|+|||.+.+......++||||+|++++++++|..||........+......+.....
T Consensus 158 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (286)
T cd07832 158 SHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKI 237 (286)
T ss_pred ccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcc
Confidence 34457888999999876665455699999999999999998888766554433333322111000
Q ss_pred CCC---------CCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhh
Q 022401 243 SVP---------DTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMF 290 (298)
Q Consensus 243 ~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~ 290 (298)
..+ .....+.++.++|.+||+.||++|||+ .++++|||+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~--------~~~l~h~~~~ 286 (286)
T cd07832 238 TFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSA--------AEALRHPYFT 286 (286)
T ss_pred cCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCH--------HHHhhCcCcC
Confidence 000 012357899999999999999999987 5666888873
No 144
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-43 Score=284.26 Aligned_cols=260 Identities=33% Similarity=0.504 Sum_probs=222.7
Q ss_pred CCCCCCeeEE-eeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcC-CCCCeeeeeEEEEe----CC
Q 022401 19 MHDSDRYDFV-RDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSL-RHPNIVRFKEVILT----PT 92 (298)
Q Consensus 19 ~~~~~~y~~~-~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~~ 92 (298)
...+++|++- ++||-|-.|.|-.+.++.+|..+|+|++... +..++|+++.-.. .|||||.++++++. ..
T Consensus 57 ~~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rk 132 (400)
T KOG0604|consen 57 YSITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS----PKARREVELHWMASGHPHIVSIIDVYENSYQGRK 132 (400)
T ss_pred ccchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCce
Confidence 3466778775 5789999999999999999999999987754 4567788877655 69999999999864 35
Q ss_pred eEEEEEeccCCCCHHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeC-CCCCCEEEeecCccc
Q 022401 93 HLAIVMEYASGGELFERICNAGR--FSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDG-SPAPRLKICDFGYSK 169 (298)
Q Consensus 93 ~~~lv~~~~~~~sL~~~l~~~~~--~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~-~~~~~~~l~d~~~~~ 169 (298)
.+.+|||.++||.|.+.+++.+. +++.++..|++||+.|++|||+.+|.||||||+|+|+.. ..++.+||+|||++.
T Consensus 133 cLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK 212 (400)
T KOG0604|consen 133 CLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAK 212 (400)
T ss_pred eeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEeccccccc
Confidence 78999999999999999987775 999999999999999999999999999999999999954 344569999999998
Q ss_pred cccCCCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCC--C
Q 022401 170 SSVLHSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPD--T 247 (298)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~--~ 247 (298)
.........+...+++|.|||++-..+|+.. +|+||+|+++|-|++|.+||........-.....+|..+.+.+|. .
T Consensus 213 ~t~~~~~L~TPc~TPyYvaPevlg~eKydks-cdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEW 291 (400)
T KOG0604|consen 213 ETQEPGDLMTPCFTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEW 291 (400)
T ss_pred ccCCCccccCCcccccccCHHHhCchhcCCC-CCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhH
Confidence 7777777788889999999999977777665 999999999999999999998876655555677788888877665 3
Q ss_pred CCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 248 NPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 248 ~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
..++++..++|+.+|..+|.+|.|+ .++.+|||+..
T Consensus 292 s~VSe~aKdlIR~LLkt~PteRlTI--------~~~m~hpwi~~ 327 (400)
T KOG0604|consen 292 SCVSEAAKDLIRKLLKTEPTERLTI--------EEVMDHPWINQ 327 (400)
T ss_pred hHHHHHHHHHHHHHhcCCchhheeH--------HHhhcCchhcc
Confidence 4678999999999999999999998 66668999864
No 145
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1.1e-41 Score=288.50 Aligned_cols=256 Identities=29% Similarity=0.404 Sum_probs=203.6
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc-----------chHHHHHHHHHHhcCCCCCeeeeeEEEEeCC
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK-----------IDENVQREIINHRSLRHPNIVRFKEVILTPT 92 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~-----------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 92 (298)
+|.+.+.||+|++|.||++.+..+++.+++|.+..... ..+.+.+|+.++++++|||++++++++....
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 68999999999999999999988899999998764211 1245778999999999999999999999999
Q ss_pred eEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCcccccc
Q 022401 93 HLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 172 (298)
Q Consensus 93 ~~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~ 172 (298)
..++|+||+++++|.+.+.....++...+..++.+++.|+.+||+.|++|+||+|+||+++.++. ++|+|||++....
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~--~~l~d~~~~~~~~ 159 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGI--CKISDFGISKKSD 159 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCe--EEEeecccccccc
Confidence 99999999999999999988888999999999999999999999999999999999999998887 9999999886433
Q ss_pred CCC---CCCCCCCCCcccCcccccccc-CCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCC
Q 022401 173 LHS---QPKSTVGTPAYIAPEVLLRHE-YDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTN 248 (298)
Q Consensus 173 ~~~---~~~~~~~~~~~~aPE~~~~~~-~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (298)
... ......++..|+|||.+.... ....++|+||||++++++++|..||..........+................
T Consensus 160 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (272)
T cd06629 160 DIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSM 239 (272)
T ss_pred ccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccc
Confidence 211 112234678899999987654 2344499999999999999999999754432221111111111111111222
Q ss_pred CCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 249 PISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 249 ~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
.++.++.+++.+||+.||.+|||+ .++++|||+
T Consensus 240 ~~~~~~~~li~~~l~~~p~~Rps~--------~~il~~~~~ 272 (272)
T cd06629 240 NLSPVALDFLNACFTINPDNRPTA--------RELLQHPFI 272 (272)
T ss_pred cCCHHHHHHHHHHhcCChhhCCCH--------HHHhhCCCC
Confidence 468999999999999999999987 666688885
No 146
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=7e-42 Score=302.49 Aligned_cols=253 Identities=24% Similarity=0.362 Sum_probs=202.3
Q ss_pred CCCCCeeEEeeeccCCeEEEEEEEE-----ccCCcEEEEEEeecCC--cchHHHHHHHHHHhcC-CCCCeeeeeEEEEeC
Q 022401 20 HDSDRYDFVRDIGSGNFGVARLMRD-----KVTKELVAVKYIERGD--KIDENVQREIINHRSL-RHPNIVRFKEVILTP 91 (298)
Q Consensus 20 ~~~~~y~~~~~lg~g~~~~vy~~~~-----~~~~~~~aiK~~~~~~--~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~ 91 (298)
...++|++.+.||+|+||.||++.+ ..++..||+|++.... ...+.+.+|+.+++.+ +||||+++++++...
T Consensus 32 ~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~ 111 (375)
T cd05104 32 FPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVG 111 (375)
T ss_pred cchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccC
Confidence 3456899999999999999999974 3456689999886432 2335678899999999 899999999999999
Q ss_pred CeEEEEEeccCCCCHHHHHHhCC---------------------------------------------------------
Q 022401 92 THLAIVMEYASGGELFERICNAG--------------------------------------------------------- 114 (298)
Q Consensus 92 ~~~~lv~~~~~~~sL~~~l~~~~--------------------------------------------------------- 114 (298)
...++||||+++++|.+++....
T Consensus 112 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (375)
T cd05104 112 GPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRS 191 (375)
T ss_pred CcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccc
Confidence 99999999999999988885421
Q ss_pred ------------------CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCC
Q 022401 115 ------------------RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ 176 (298)
Q Consensus 115 ------------------~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~ 176 (298)
.++...+..++.|++.||.|||+.|++|+||||+||+++.++. ++|+|||++........
T Consensus 192 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~--~kl~DfG~a~~~~~~~~ 269 (375)
T cd05104 192 GSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRI--TKICDFGLARDIRNDSN 269 (375)
T ss_pred ceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCc--EEEecCccceeccCccc
Confidence 3677889999999999999999999999999999999998776 99999999864432221
Q ss_pred ---CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCH
Q 022401 177 ---PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQ 252 (298)
Q Consensus 177 ---~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (298)
.....++..|+|||.+.+..++.+ +||||||+++|+|++ |..||........+.+.+. .......+...+.
T Consensus 270 ~~~~~~~~~~~~y~aPE~~~~~~~~~~-sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 344 (375)
T cd05104 270 YVVKGNARLPVKWMAPESIFNCVYTFE-SDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIK----EGYRMLSPECAPS 344 (375)
T ss_pred ccccCCCCCCcceeChhHhcCCCCCCC-CCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHH----hCccCCCCCCCCH
Confidence 112234567999999988777665 999999999999998 8889987654433333222 2222223334688
Q ss_pred HHHHHHHHhhhhCCCCcccccccchhh
Q 022401 253 ECRDLISRIFVADPAAVSIFFFPLNMS 279 (298)
Q Consensus 253 ~l~~li~~~l~~dp~~Rps~~~~l~~~ 279 (298)
++.+++.+||+.||++|||+.+++++.
T Consensus 345 ~l~~li~~cl~~dP~~RPs~~eil~~l 371 (375)
T cd05104 345 EMYDIMKSCWDADPLKRPTFKQIVQLI 371 (375)
T ss_pred HHHHHHHHHccCChhHCcCHHHHHHHH
Confidence 999999999999999999999998654
No 147
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=7e-42 Score=289.01 Aligned_cols=252 Identities=26% Similarity=0.375 Sum_probs=202.3
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC-cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEec
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD-KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY 100 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~ 100 (298)
.++|++.+.||+|+||.||++.+..+++.+++|++.... .....+.+|+.++++++|||++++++++..+..+++|+||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 467999999999999999999998899999999987543 2335677899999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC-CCCC
Q 022401 101 ASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-QPKS 179 (298)
Q Consensus 101 ~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~-~~~~ 179 (298)
+++++|.+++....++++..+..++.|++.|++|||+.|++|+||+|+||+++.++. ++|+|||++....... ....
T Consensus 88 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~--~~l~dfg~~~~~~~~~~~~~~ 165 (267)
T cd06646 88 CGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGD--VKLADFGVAAKITATIAKRKS 165 (267)
T ss_pred CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCC--EEECcCccceeecccccccCc
Confidence 999999999988888999999999999999999999999999999999999998887 9999999987543222 2233
Q ss_pred CCCCCcccCcccccc---ccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHH
Q 022401 180 TVGTPAYIAPEVLLR---HEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRD 256 (298)
Q Consensus 180 ~~~~~~~~aPE~~~~---~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 256 (298)
..+++.|+|||.+.. ..++ .++|+||+|+++|+|++|..||............... ............++.++.+
T Consensus 166 ~~~~~~y~~PE~~~~~~~~~~~-~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 243 (267)
T cd06646 166 FIGTPYWMAPEVAAVEKNGGYN-QLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS-NFQPPKLKDKTKWSSTFHN 243 (267)
T ss_pred cccCccccCHhHcccccCCCCc-chhhHHHHHHHHHHHHhCCCCccccchhhhheeeecC-CCCCCCCccccccCHHHHH
Confidence 457788999998753 2343 4599999999999999999998654322111110000 0011112223347899999
Q ss_pred HHHHhhhhCCCCcccccccch
Q 022401 257 LISRIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 257 li~~~l~~dp~~Rps~~~~l~ 277 (298)
++++||+.||++|||+.++++
T Consensus 244 li~~~l~~~P~~Rp~~~~il~ 264 (267)
T cd06646 244 FVKISLTKNPKKRPTAERLLT 264 (267)
T ss_pred HHHHHhhCChhhCcCHHHHhc
Confidence 999999999999999866654
No 148
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1.9e-41 Score=285.37 Aligned_cols=248 Identities=32% Similarity=0.451 Sum_probs=204.5
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc-chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEecc
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYA 101 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~ 101 (298)
++|++.+.||.|++|.||.+.+..+++.+++|.+..... ....+.+|+.++++++|||++++++++.+...+++++|++
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence 689999999999999999999988889999999876432 3467889999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC-CCCC
Q 022401 102 SGGELFERICNA-GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-QPKS 179 (298)
Q Consensus 102 ~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~-~~~~ 179 (298)
.+++|.+++... ..+++.++..++.|++.|+.|||+.|++|+||+|+||+++.++. ++|+|||++....... ....
T Consensus 83 ~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~--~~l~d~g~~~~~~~~~~~~~~ 160 (262)
T cd06613 83 GGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGD--VKLADFGVSAQLTATIAKRKS 160 (262)
T ss_pred CCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCC--EEECccccchhhhhhhhcccc
Confidence 999999988766 68999999999999999999999999999999999999998887 9999999886443322 2233
Q ss_pred CCCCCcccCccccccc---cCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcC---CCCCCCCCCCHH
Q 022401 180 TVGTPAYIAPEVLLRH---EYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQ---YSVPDTNPISQE 253 (298)
Q Consensus 180 ~~~~~~~~aPE~~~~~---~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 253 (298)
..++..|+|||.+.+. .++.+ +|+||+|+++++|++|..||........... ..... ........++.+
T Consensus 161 ~~~~~~y~~Pe~~~~~~~~~~~~~-~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 235 (262)
T cd06613 161 FIGTPYWMAPEVAAVERKGGYDGK-CDIWALGITAIELAELQPPMFDLHPMRALFL----ISKSNFPPPKLKDKEKWSPV 235 (262)
T ss_pred ccCCccccCchhhcccccCCcCch-hhhHHHHHHHHHHHhCCCCCCCCCHHHHHHH----HHhccCCCccccchhhhhHH
Confidence 4567789999998766 56554 9999999999999999999987653222211 11121 111223346789
Q ss_pred HHHHHHHhhhhCCCCcccccccch
Q 022401 254 CRDLISRIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 254 l~~li~~~l~~dp~~Rps~~~~l~ 277 (298)
+.+++++||+.||.+|||+.++++
T Consensus 236 ~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 236 FHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred HHHHHHHHcCCChhhCCCHHHHhc
Confidence 999999999999999999855553
No 149
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=2.3e-41 Score=285.81 Aligned_cols=252 Identities=28% Similarity=0.394 Sum_probs=203.0
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC------cchHHHHHHHHHHhcCCCCCeeeeeEEEEeC--CeE
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD------KIDENVQREIINHRSLRHPNIVRFKEVILTP--THL 94 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~ 94 (298)
.+|++.+.||+|++|.||++.+..+++.+++|.+.... +....+.+|+.++++++||||+++++++... ..+
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 36999999999999999999999899999999886432 1234577899999999999999999998753 578
Q ss_pred EEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC
Q 022401 95 AIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH 174 (298)
Q Consensus 95 ~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~ 174 (298)
++++|++++++|.+.+.....++....+.++.|++.|+.+||+.+++|+||+|+||+++.++. ++|+|||++......
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~--~~l~dfg~~~~~~~~ 159 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGN--VKLGDFGASKRLQTI 159 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCC--EEEccCCCccccccc
Confidence 999999999999999988888999999999999999999999999999999999999998877 999999987643221
Q ss_pred ----CCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCC
Q 022401 175 ----SQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPI 250 (298)
Q Consensus 175 ----~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (298)
.......++..|+|||.+.+..++.+ +|+||+|+++|++++|..||........ .............+..+
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Dv~slG~i~~el~~g~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~ 234 (266)
T cd06651 160 CMSGTGIRSVTGTPYWMSPEVISGEGYGRK-ADVWSLGCTVVEMLTEKPPWAEYEAMAA----IFKIATQPTNPQLPSHI 234 (266)
T ss_pred cccCCccccCCccccccCHHHhCCCCCCch-hhhHHHHHHHHHHHHCCCCccccchHHH----HHHHhcCCCCCCCchhc
Confidence 11122346788999999887777665 9999999999999999999987543222 22222222222223346
Q ss_pred CHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhh
Q 022401 251 SQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMF 290 (298)
Q Consensus 251 ~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~ 290 (298)
++.+.+++ +||..+|++||++ .++++|||++
T Consensus 235 ~~~~~~li-~~~~~~p~~Rp~~--------~eil~hp~~~ 265 (266)
T cd06651 235 SEHARDFL-GCIFVEARHRPSA--------EELLRHPFAQ 265 (266)
T ss_pred CHHHHHHH-HHhcCChhhCcCH--------HHHhcCcccc
Confidence 78899998 6888999999987 5555788864
No 150
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4e-43 Score=317.90 Aligned_cols=249 Identities=26% Similarity=0.382 Sum_probs=217.4
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEc-----cCCcEEEEEEeecCCcc--hHHHHHHHHHHhcCCCCCeeeeeEEEEeCCe
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDK-----VTKELVAVKYIERGDKI--DENVQREIINHRSLRHPNIVRFKEVILTPTH 93 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~-----~~~~~~aiK~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 93 (298)
...+.++.+.||+|+||.||+++-. .....||||.++..... ..+|++|++++..|+|||||+++|+|..++.
T Consensus 484 ~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P 563 (774)
T KOG1026|consen 484 PRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDP 563 (774)
T ss_pred chhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCe
Confidence 4467889999999999999999864 34568999998875443 5789999999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHHhC--------------CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCC
Q 022401 94 LAIVMEYASGGELFERICNA--------------GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPR 159 (298)
Q Consensus 94 ~~lv~~~~~~~sL~~~l~~~--------------~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~ 159 (298)
+|+|||||..|+|.++|... ++++..+.+.|+.||+.|+.||-++.+|||||-..|.||+++-.
T Consensus 564 ~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~-- 641 (774)
T KOG1026|consen 564 LCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLV-- 641 (774)
T ss_pred eEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceE--
Confidence 99999999999999998432 23888999999999999999999999999999999999998887
Q ss_pred EEEeecCccccccCC---CCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHH
Q 022401 160 LKICDFGYSKSSVLH---SQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQ 235 (298)
Q Consensus 160 ~~l~d~~~~~~~~~~---~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~ 235 (298)
|||+|||+++..... .......-..+|||||.+...+++++ |||||+|+++||+++ |..||.+... .+++.
T Consensus 642 VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTte-SDVWs~GVvLWEIFsyG~QPy~glSn----~EVIe 716 (774)
T KOG1026|consen 642 VKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTE-SDVWSFGVVLWEIFSYGKQPYYGLSN----QEVIE 716 (774)
T ss_pred EEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccch-hhhhhhhhhhhhhhccccCcccccch----HHHHH
Confidence 999999999744332 22234456789999999999999998 999999999999998 8899988776 56677
Q ss_pred HHhhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccch
Q 022401 236 RILSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~ 277 (298)
-+..+.. ++.+.++|.++.+|+..||+.+|.+||++++|-.
T Consensus 717 ~i~~g~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~ 757 (774)
T KOG1026|consen 717 CIRAGQL-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHS 757 (774)
T ss_pred HHHcCCc-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 7777887 8888889999999999999999999999988764
No 151
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=8e-42 Score=297.47 Aligned_cols=256 Identities=26% Similarity=0.425 Sum_probs=204.8
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC----CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEE
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG----DKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
++|++.+.||+|+||.||++++..+++.||+|++... ......+.+|..++..++|++|+++.+++.+++..|+|+
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 4799999999999999999999999999999998652 222344778899999999999999999999999999999
Q ss_pred eccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCC-
Q 022401 99 EYASGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ- 176 (298)
Q Consensus 99 ~~~~~~sL~~~l~~-~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~- 176 (298)
||+.+++|.+++.. ...+++..+..++.|++.||+|||++|++|+||||+||+++.++. ++|+|||++........
T Consensus 81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~--~kl~DfG~a~~~~~~~~~ 158 (331)
T cd05624 81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGH--IRLADFGSCLKMNQDGTV 158 (331)
T ss_pred eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCC--EEEEeccceeeccCCCce
Confidence 99999999999976 467899999999999999999999999999999999999998887 99999999864432221
Q ss_pred -CCCCCCCCcccCcccccc-----ccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCC--CCC-C
Q 022401 177 -PKSTVGTPAYIAPEVLLR-----HEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYS--VPD-T 247 (298)
Q Consensus 177 -~~~~~~~~~~~aPE~~~~-----~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~-~ 247 (298)
.....+++.|+|||++.+ ..++ .++|+||+|+++|+|++|..||...+.. +...++...... .+. .
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~-~~~DiwSlGvil~ell~g~~Pf~~~~~~----~~~~~i~~~~~~~~~p~~~ 233 (331)
T cd05624 159 QSSVAVGTPDYISPEILQAMEDGMGKYG-PECDWWSLGVCMYEMLYGETPFYAESLV----ETYGKIMNHEERFQFPSHI 233 (331)
T ss_pred eeccccCCcccCCHHHHhccccCCCCCC-CcccEEeeehhhhhhhhCCCCccCCCHH----HHHHHHHcCCCcccCCCcc
Confidence 123458899999998865 2343 4499999999999999999999875542 333333332222 221 2
Q ss_pred CCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 248 NPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 248 ~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
..+++++.+++.+||..++ +|+.. ....+++.|||+.+
T Consensus 234 ~~~~~~~~~li~~ll~~~~-~~~~~-----~~~~~~~~h~~f~~ 271 (331)
T cd05624 234 TDVSEEAKDLIQRLICSRE-RRLGQ-----NGIEDFKKHAFFEG 271 (331)
T ss_pred ccCCHHHHHHHHHHccCch-hhcCC-----CCHHHHhcCCCcCC
Confidence 3468999999999998655 44321 24577888998865
No 152
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.1e-41 Score=288.69 Aligned_cols=257 Identities=25% Similarity=0.396 Sum_probs=209.6
Q ss_pred CCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC-cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEE
Q 022401 20 HDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD-KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 20 ~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
....+|++.+.||+|++|.||++.+..+++.+++|.+.... .....+.+|+.+++.++|+|++++++.+..+...++|+
T Consensus 17 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~ 96 (296)
T cd06654 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (296)
T ss_pred CcccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEee
Confidence 34468999999999999999999998889999999887643 23456788999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC-CC
Q 022401 99 EYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-QP 177 (298)
Q Consensus 99 ~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~-~~ 177 (298)
||+++++|.+++.+ ..++..++..++.|++.||.|||+.|++|+||+|+||+++.++. ++|+|||++....... ..
T Consensus 97 e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~--~kl~dfg~~~~~~~~~~~~ 173 (296)
T cd06654 97 EYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS--VKLTDFGFCAQITPEQSKR 173 (296)
T ss_pred cccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCC--EEECccccchhcccccccc
Confidence 99999999998854 45789999999999999999999999999999999999998876 9999999876433222 12
Q ss_pred CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHH
Q 022401 178 KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDL 257 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (298)
....+++.|+|||.+.+..++.+ +|+||||+++|+|++|..||.......... ..........+.+..++..+.++
T Consensus 174 ~~~~~~~~y~aPE~~~~~~~~~~-~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~l 249 (296)
T cd06654 174 STMVGTPYWMAPEVVTRKAYGPK-VDIWSLGIMAIEMIEGEPPYLNENPLRALY---LIATNGTPELQNPEKLSAIFRDF 249 (296)
T ss_pred CcccCCccccCHHHHcCCCCCcc-chHHHHHHHHHHHHhCCCCCCCCCHHHhHH---HHhcCCCCCCCCccccCHHHHHH
Confidence 23457788999999877766555 999999999999999999997655322221 11122222333445578999999
Q ss_pred HHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 258 ISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 258 i~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
+.+||..||++|||+.+++ +|||+..
T Consensus 250 i~~~l~~~p~~Rpt~~eil--------~~~~~~~ 275 (296)
T cd06654 250 LNRCLDMDVEKRGSAKELL--------QHQFLKI 275 (296)
T ss_pred HHHHCcCCcccCcCHHHHh--------hChhhhc
Confidence 9999999999999885555 6777653
No 153
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.4e-41 Score=287.18 Aligned_cols=255 Identities=27% Similarity=0.416 Sum_probs=207.9
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC-------cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEE
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD-------KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAI 96 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~-------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 96 (298)
+|+..+.||+|++|.||.+.+..+++.+++|.+.... .....+.+|+.++++++|+|++++++++.+.+.+++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 4889999999999999999998899999999887532 123568899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCC
Q 022401 97 VMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ 176 (298)
Q Consensus 97 v~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~ 176 (298)
|++|+.+++|.+++.+..++++..++.++.|++.||.+||++|++|+||+|+||+++.++. .++|+|||.+........
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~-~~~l~dfg~~~~~~~~~~ 159 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQ-RLRIADFGAAARLAAKGT 159 (268)
T ss_pred EEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC-EEEEcccccccccccccc
Confidence 9999999999999988888999999999999999999999999999999999999976653 489999998764433211
Q ss_pred -----CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCC
Q 022401 177 -----PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPIS 251 (298)
Q Consensus 177 -----~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (298)
.....++..|+|||.+.+..++.+ +|+||+|++++++++|..||......... ....+..........+..++
T Consensus 160 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~-~Dv~slG~~l~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 237 (268)
T cd06630 160 GAGEFQGQLLGTIAFMAPEVLRGEQYGRS-CDVWSVGCVIIEMATAKPPWNAEKHSNHL-ALIFKIASATTAPSIPEHLS 237 (268)
T ss_pred cCCccccccccccceeCHhHhccCCCCcc-cchHHHHHHHHHHHhCCCCCCCCCCcchH-HHHHHHhccCCCCCCchhhC
Confidence 122346778999999877666555 99999999999999999999765433222 22222222222223334478
Q ss_pred HHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 252 QECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 252 ~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
+++.+++.+||..||.+||++ .++++|||+
T Consensus 238 ~~~~~~i~~~l~~~p~~R~~~--------~~ll~~~~~ 267 (268)
T cd06630 238 PGLRDVTLRCLELQPEDRPPS--------RELLKHPVF 267 (268)
T ss_pred HHHHHHHHHHcCCCcccCcCH--------HHHhcCccc
Confidence 999999999999999999987 555678886
No 154
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=9.9e-42 Score=296.51 Aligned_cols=257 Identities=23% Similarity=0.380 Sum_probs=197.4
Q ss_pred eEEeeeccC--CeEEEEEEEEccCCcEEEEEEeecCC---cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEec
Q 022401 26 DFVRDIGSG--NFGVARLMRDKVTKELVAVKYIERGD---KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY 100 (298)
Q Consensus 26 ~~~~~lg~g--~~~~vy~~~~~~~~~~~aiK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~ 100 (298)
+++++||+| ++++||++.++.+|+.||+|++.... .....+.+|+.+++.++||||+++++++..++..++|+||
T Consensus 1 ~~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 80 (327)
T cd08227 1 ELLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSF 80 (327)
T ss_pred ChhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEec
Confidence 357889999 78899999999999999999987542 2335577899999999999999999999999999999999
Q ss_pred cCCCCHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCC--
Q 022401 101 ASGGELFERICN--AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ-- 176 (298)
Q Consensus 101 ~~~~sL~~~l~~--~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~-- 176 (298)
+++++|.+++.. ...+++..++.++.|++.||+|||+.|++|+||||+||+++.++. +++.||+.+........
T Consensus 81 ~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~--~~l~~~~~~~~~~~~~~~~ 158 (327)
T cd08227 81 MAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGK--VYLSGLRSNLSMINHGQRL 158 (327)
T ss_pred cCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCc--EEEcccchhhccccccccc
Confidence 999999999864 345899999999999999999999999999999999999998887 99999975432211111
Q ss_pred ------CCCCCCCCcccCccccccc--cCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcC-------
Q 022401 177 ------PKSTVGTPAYIAPEVLLRH--EYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQ------- 241 (298)
Q Consensus 177 ------~~~~~~~~~~~aPE~~~~~--~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~------- 241 (298)
.....++..|+|||.+.+. .++. ++||||+||++|++++|..||....................
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~-~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (327)
T cd08227 159 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDA-KSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIP 237 (327)
T ss_pred cccccccccccceecccChHHhhcccCCCCc-hhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchh
Confidence 1122345679999998764 3444 49999999999999999999976543222211111000000
Q ss_pred ---------------------------------CCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhh
Q 022401 242 ---------------------------------YSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVW 288 (298)
Q Consensus 242 ---------------------------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~ 288 (298)
...+....+++++.+|+.+||+.||++|||+ .++++|||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~--------~ell~~p~ 309 (327)
T cd08227 238 AEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSA--------STLLNHSF 309 (327)
T ss_pred hhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCH--------HHHhcChh
Confidence 0001112356789999999999999999988 56668888
Q ss_pred hhhhh
Q 022401 289 MFDAT 293 (298)
Q Consensus 289 ~~~~~ 293 (298)
+...+
T Consensus 310 f~~~~ 314 (327)
T cd08227 310 FKQIK 314 (327)
T ss_pred hhhcc
Confidence 87543
No 155
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.6e-41 Score=285.05 Aligned_cols=249 Identities=25% Similarity=0.394 Sum_probs=203.6
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEec
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY 100 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~ 100 (298)
+.++|++.+.||+|+||.||++..+. +..+++|.+.........+.+|+.++++++||||+++++++......++++||
T Consensus 2 ~~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~ 80 (256)
T cd05114 2 NPSELTFMKELGSGQFGVVHLGKWRA-QIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEF 80 (256)
T ss_pred CHHHcEEeeEecCCcCceEEEEEecc-CceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEc
Confidence 34679999999999999999998764 55799998876655567889999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCC--
Q 022401 101 ASGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP-- 177 (298)
Q Consensus 101 ~~~~sL~~~l~~-~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~-- 177 (298)
+++++|.+.+.. ...++...++.++.+++.||.|||++|++|+||+|+||+++.++. ++|+|||.+.........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~--~kl~d~g~~~~~~~~~~~~~ 158 (256)
T cd05114 81 MENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGV--VKVSDFGMTRYVLDDEYTSS 158 (256)
T ss_pred CCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCe--EEECCCCCccccCCCceecc
Confidence 999999998865 346899999999999999999999999999999999999998876 999999987643222111
Q ss_pred CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHH
Q 022401 178 KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRD 256 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 256 (298)
....++..|+|||.+.+..++.+ +|+||+|+++|++++ |..||...+..+. ...+.... ....+...+.++.+
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~-~Di~s~G~~l~el~~~g~~p~~~~~~~~~----~~~i~~~~-~~~~~~~~~~~~~~ 232 (256)
T cd05114 159 SGAKFPVKWSPPEVFNFSKYSSK-SDVWSFGVLMWEVFTEGKMPFEKKSNYEV----VEMISRGF-RLYRPKLASMTVYE 232 (256)
T ss_pred CCCCCchhhCChhhcccCccchh-hhhHHHHHHHHHHHcCCCCCCCCCCHHHH----HHHHHCCC-CCCCCCCCCHHHHH
Confidence 12234457999999877776655 999999999999999 8899987654332 22333222 22223346889999
Q ss_pred HHHHhhhhCCCCcccccccchh
Q 022401 257 LISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 257 li~~~l~~dp~~Rps~~~~l~~ 278 (298)
++.+||+.||.+|||+.+++..
T Consensus 233 li~~c~~~~p~~Rps~~~l~~~ 254 (256)
T cd05114 233 VMYSCWHEKPEGRPTFAELLRA 254 (256)
T ss_pred HHHHHccCCcccCcCHHHHHHh
Confidence 9999999999999999988864
No 156
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=2.6e-41 Score=284.98 Aligned_cols=251 Identities=20% Similarity=0.297 Sum_probs=207.8
Q ss_pred CCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEe
Q 022401 20 HDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVME 99 (298)
Q Consensus 20 ~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~ 99 (298)
+...+|++.+.||+|++|.||++....+++.+++|.+..+......+.+|+.++++++|+|++++++++..+..+++++|
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (263)
T cd05052 3 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 82 (263)
T ss_pred CchHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEE
Confidence 45578999999999999999999999889999999988765556778899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCC
Q 022401 100 YASGGELFERICNA--GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP 177 (298)
Q Consensus 100 ~~~~~sL~~~l~~~--~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~ 177 (298)
|+++++|.+++... ..++...++.++.|++.++.+||++|++|+||+|+||++++++. ++|+|||++.........
T Consensus 83 ~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~--~kl~df~~~~~~~~~~~~ 160 (263)
T cd05052 83 FMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL--VKVADFGLSRLMTGDTYT 160 (263)
T ss_pred eCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCc--EEeCCCccccccccceee
Confidence 99999999998653 35889999999999999999999999999999999999988877 999999988644332211
Q ss_pred C--CCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHH
Q 022401 178 K--STVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQEC 254 (298)
Q Consensus 178 ~--~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (298)
. ....+..|+|||.+.+..++.+ +||||||+++|+|++ |..||......+ ....+.. ......+..+|.++
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~-~Dv~slG~il~el~t~g~~p~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~ 234 (263)
T cd05052 161 AHAGAKFPIKWTAPESLAYNKFSIK-SDVWAFGVLLWEIATYGMSPYPGIDLSQ----VYELLEK-GYRMERPEGCPPKV 234 (263)
T ss_pred ccCCCCCccccCCHHHhccCCCCch-hHHHHHHHHHHHHHcCCCCCCCCCCHHH----HHHHHHC-CCCCCCCCCCCHHH
Confidence 1 1223457999999877777665 999999999999998 889987654322 2222222 22333445578999
Q ss_pred HHHHHHhhhhCCCCcccccccchh
Q 022401 255 RDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 255 ~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
.+++.+||+.||.+|||+.+++.+
T Consensus 235 ~~li~~cl~~~p~~Rp~~~~l~~~ 258 (263)
T cd05052 235 YELMRACWQWNPSDRPSFAEIHQA 258 (263)
T ss_pred HHHHHHHccCCcccCCCHHHHHHH
Confidence 999999999999999999888764
No 157
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.7e-41 Score=292.09 Aligned_cols=253 Identities=23% Similarity=0.333 Sum_probs=198.3
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEcc----------------CCcEEEEEEeecCCc--chHHHHHHHHHHhcCCCCCeee
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDKV----------------TKELVAVKYIERGDK--IDENVQREIINHRSLRHPNIVR 83 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~~----------------~~~~~aiK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~ 83 (298)
.++|++.+.||+|+||.||++.+.. ++..||+|.+..... ....+.+|+.++.+++||||++
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 4689999999999999999997532 344799998876432 2356889999999999999999
Q ss_pred eeEEEEeCCeEEEEEeccCCCCHHHHHHhCC-------------------CCCHHHHHHHHHHHHHHHHHHhhcCcEEec
Q 022401 84 FKEVILTPTHLAIVMEYASGGELFERICNAG-------------------RFSEDEARFFFQQLISGVSYCHAMQVCHRD 144 (298)
Q Consensus 84 ~~~~~~~~~~~~lv~~~~~~~sL~~~l~~~~-------------------~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~d 144 (298)
+++++.+.+..++++||+.+++|.+++.... .++...++.++.|++.||.|||+.|++|+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~d 163 (304)
T cd05096 84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRD 163 (304)
T ss_pred EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence 9999999999999999999999999885432 356778999999999999999999999999
Q ss_pred CCCCceEeeCCCCCCEEEeecCccccccCCC---CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh--CCC
Q 022401 145 LKLENTLLDGSPAPRLKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV--GGY 219 (298)
Q Consensus 145 l~p~nilv~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~--g~~ 219 (298)
|||+||+++.++. ++|+|||++....... ......++..|+|||.+....++.+ +||||||+++|+|++ +..
T Consensus 164 lkp~Nill~~~~~--~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Dv~slG~~l~el~~~~~~~ 240 (304)
T cd05096 164 LATRNCLVGENLT--IKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTA-SDVWAFGVTLWEILMLCKEQ 240 (304)
T ss_pred cchhheEEcCCcc--EEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCch-hhhHHHHHHHHHHHHccCCC
Confidence 9999999998877 9999999886432221 1223344678999999877777665 999999999999986 567
Q ss_pred CCCCCCCchhHHHHHHHHhhc--CCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccch
Q 022401 220 PFEDPDEPKDFRKTIQRILSV--QYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 220 pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~ 277 (298)
||................... ......+..+|..+.+++.+||+.||.+|||+.++..
T Consensus 241 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~ 300 (304)
T cd05096 241 PYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHA 300 (304)
T ss_pred CCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence 887755433322222211111 1112223457899999999999999999999988753
No 158
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.3e-41 Score=289.43 Aligned_cols=256 Identities=27% Similarity=0.425 Sum_probs=209.1
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC-cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEecc
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD-KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYA 101 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~ 101 (298)
++|++.+.||.|++|.||.+.+..++..+++|++.... ...+.+.+|+.++++++|||++++++++..+...++|+||+
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFC 84 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeecc
Confidence 57999999999999999999998889999999987543 23356788999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC-CCCC
Q 022401 102 SGGELFERICNA-GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-QPKS 179 (298)
Q Consensus 102 ~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~-~~~~ 179 (298)
++++|.+++... ..+++..+..++.|++.++.|||+.|++|+||+|+||+++.++. ++|+|||.+....... ....
T Consensus 85 ~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~--~~l~d~g~~~~~~~~~~~~~~ 162 (280)
T cd06611 85 DGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGD--VKLADFGVSAKNKSTLQKRDT 162 (280)
T ss_pred CCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCC--EEEccCccchhhcccccccce
Confidence 999999998764 46899999999999999999999999999999999999998887 9999999875432222 2223
Q ss_pred CCCCCcccCcccccc-----ccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcC-CCCCCCCCCCHH
Q 022401 180 TVGTPAYIAPEVLLR-----HEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQ-YSVPDTNPISQE 253 (298)
Q Consensus 180 ~~~~~~~~aPE~~~~-----~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 253 (298)
..+++.|+|||.+.. ..++. ++|+||||+++|+|++|..||....... ....+.... .....+..++.+
T Consensus 163 ~~~~~~y~~PE~~~~~~~~~~~~~~-~sDi~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 237 (280)
T cd06611 163 FIGTPYWMAPEVVACETFKDNPYDY-KADIWSLGITLIELAQMEPPHHELNPMR----VLLKILKSEPPTLDQPSKWSSS 237 (280)
T ss_pred eecchhhcCHHHHhhcccCCCCCCc-cccHHHHHHHHHHHHhCCCCcccCCHHH----HHHHHhcCCCCCcCCcccCCHH
Confidence 457788999998753 22333 4999999999999999999998754322 222232222 233334457899
Q ss_pred HHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhhh
Q 022401 254 CRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDAT 293 (298)
Q Consensus 254 l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~~ 293 (298)
+.+++.+||+.||.+||++ .++++|||+.+..
T Consensus 238 ~~~li~~~l~~~p~~Rps~--------~~il~~~~~~~~~ 269 (280)
T cd06611 238 FNDFLKSCLVKDPDDRPTA--------AELLKHPFVSDQS 269 (280)
T ss_pred HHHHHHHHhccChhhCcCH--------HHHhcChhhcccc
Confidence 9999999999999999987 5666889987653
No 159
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=5.3e-41 Score=281.93 Aligned_cols=250 Identities=26% Similarity=0.468 Sum_probs=203.7
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC---cchHHHHHHHHHHhcCCCCCeeeeeEEEEe-CCeEEEEEe
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD---KIDENVQREIINHRSLRHPNIVRFKEVILT-PTHLAIVME 99 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~~ 99 (298)
+|++.+.||.|++|.||.+.+..+++.+++|.+.... ...+.+.+|++++++++|+|++++.+.+.. +..+++++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4999999999999999999999889999999987543 233567889999999999999999998764 446899999
Q ss_pred ccCCCCHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC-CC
Q 022401 100 YASGGELFERICN--AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH-SQ 176 (298)
Q Consensus 100 ~~~~~sL~~~l~~--~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~-~~ 176 (298)
++++++|.+.+.. ...+++.+++.++.+++.++++||+.|++|+||+|+||+++.++. ++|+|||++...... ..
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~--~~l~df~~~~~~~~~~~~ 158 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNI--IKVGDLGIARVLENQCDM 158 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCc--EEEecccceEEecccCCc
Confidence 9999999998865 345899999999999999999999999999999999999998887 999999988644322 22
Q ss_pred CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHH
Q 022401 177 PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRD 256 (298)
Q Consensus 177 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 256 (298)
.....+++.|+|||.+.+..++.+ +|+||+|++++++++|..||...+.. .....+..+... +.....++++.+
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~-~Dv~slG~il~~l~~g~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~ 232 (257)
T cd08223 159 ASTLIGTPYYMSPELFSNKPYNYK-SDVWALGCCVYEMATLKHAFNAKDMN----SLVYRIIEGKLP-PMPKDYSPELGE 232 (257)
T ss_pred cccccCCcCccChhHhcCCCCCch-hhhHHHHHHHHHHHcCCCCCCCCCHH----HHHHHHHhcCCC-CCccccCHHHHH
Confidence 233457888999999888777665 99999999999999999999765432 222233333221 223447899999
Q ss_pred HHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 257 LISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 257 li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
++.+||+.||++|||+ .+++.|||+
T Consensus 233 li~~~l~~~p~~Rp~~--------~~~l~~~~~ 257 (257)
T cd08223 233 LIATMLSKRPEKRPSV--------KSILRQPYI 257 (257)
T ss_pred HHHHHhccCcccCCCH--------HHHhcCCCC
Confidence 9999999999999987 555577775
No 160
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3e-41 Score=300.24 Aligned_cols=255 Identities=21% Similarity=0.307 Sum_probs=202.5
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEc--cCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEE
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDK--VTKELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~--~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
...+|++++.||.|+||.||++... .++..+++|.+... ....+|+.++++++||||+++++++.....+|+++
T Consensus 90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 3567999999999999999999764 35678999987653 23467999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCC--
Q 022401 99 EYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ-- 176 (298)
Q Consensus 99 ~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~-- 176 (298)
+++. ++|.+++.....+++.+++.++.|++.||.|||+.|++|+||||+||+++.++. ++|+|||++........
T Consensus 166 e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~--~~l~DfG~a~~~~~~~~~~ 242 (392)
T PHA03207 166 PKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPEN--AVLGDFGAACKLDAHPDTP 242 (392)
T ss_pred hhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCC--EEEccCccccccCcccccc
Confidence 9995 578888877788999999999999999999999999999999999999998887 99999999864433221
Q ss_pred -CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCc---hhHHHHHHHHhhcCCC---------
Q 022401 177 -PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEP---KDFRKTIQRILSVQYS--------- 243 (298)
Q Consensus 177 -~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~---~~~~~~~~~~~~~~~~--------- 243 (298)
.....+++.|+|||++.+..++.+ +|||||||++|+|++|..||.+.... ..+....+.+......
T Consensus 243 ~~~~~~gt~~y~aPE~~~~~~~~~~-~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~ 321 (392)
T PHA03207 243 QCYGWSGTLETNSPELLALDPYCAK-TDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNL 321 (392)
T ss_pred cccccccccCccCHhHhcCCCCCch-hhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhH
Confidence 123458899999999988777666 99999999999999999999765432 2222222211111100
Q ss_pred ----------------CC---CCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 244 ----------------VP---DTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 244 ----------------~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
.+ ....++.++.++|++||..||++|||+ .+++.|||+..
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa--------~e~l~~p~f~~ 380 (392)
T PHA03207 322 CKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSA--------QDILSLPLFTK 380 (392)
T ss_pred HHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCH--------HHHhhCchhhc
Confidence 00 012356789999999999999999987 56668888874
No 161
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=2.3e-41 Score=286.58 Aligned_cols=255 Identities=26% Similarity=0.429 Sum_probs=206.3
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcC-CCCCeeeeeEEEEeCC------e
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSL-RHPNIVRFKEVILTPT------H 93 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~------~ 93 (298)
..++|++.+.||+|++|.||.+.+..+++.+++|++.......+.+.+|+.+++++ .|+|++++++++.... .
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~ 83 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQ 83 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceE
Confidence 35799999999999999999999988889999999987776667889999999999 6999999999997644 4
Q ss_pred EEEEEeccCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccc
Q 022401 94 LAIVMEYASGGELFERICN----AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK 169 (298)
Q Consensus 94 ~~lv~~~~~~~sL~~~l~~----~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~ 169 (298)
+++|+||+++++|.+++.. ...+++..+..++.|++.||.|||+.|++|+||+|+||+++.++. ++|+|||++.
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~--~~l~d~~~~~ 161 (275)
T cd06608 84 LWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAE--VKLVDFGVSA 161 (275)
T ss_pred EEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCe--EEECCCccce
Confidence 8999999999999988764 357899999999999999999999999999999999999998877 9999999876
Q ss_pred cccCC-CCCCCCCCCCcccCcccccccc----CCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhc-CCC
Q 022401 170 SSVLH-SQPKSTVGTPAYIAPEVLLRHE----YDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSV-QYS 243 (298)
Q Consensus 170 ~~~~~-~~~~~~~~~~~~~aPE~~~~~~----~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~ 243 (298)
..... .......++..|+|||.+.... ....++||||||++++++++|..||.......... .+... ...
T Consensus 162 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~----~~~~~~~~~ 237 (275)
T cd06608 162 QLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALF----KIPRNPPPT 237 (275)
T ss_pred ecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHH----HhhccCCCC
Confidence 43222 2223445788899999875322 12334999999999999999999997654322222 22222 222
Q ss_pred CCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 244 VPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 244 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
......+++++.+++.+||..||.+|||+ .+++.|||+
T Consensus 238 ~~~~~~~~~~~~~li~~~l~~dp~~Rpt~--------~~ll~~~~~ 275 (275)
T cd06608 238 LKSPENWSKKFNDFISECLIKNYEQRPFM--------EELLEHPFI 275 (275)
T ss_pred CCchhhcCHHHHHHHHHHhhcChhhCcCH--------HHHhcCCCC
Confidence 33333478899999999999999999987 566678885
No 162
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=4.7e-41 Score=281.89 Aligned_cols=252 Identities=32% Similarity=0.475 Sum_probs=213.2
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC---cchHHHHHHHHHHhcCCCCCeeeeeEEEEeC--CeEEEEE
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD---KIDENVQREIINHRSLRHPNIVRFKEVILTP--THLAIVM 98 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~ 98 (298)
+|++.+.||+|++|.||.+.+..+++.+++|++.... ...+.+.+|+..+++++|+|++++++.+.+. ..+++++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 5889999999999999999999889999999987654 3456788999999999999999999999988 8999999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCC--
Q 022401 99 EYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ-- 176 (298)
Q Consensus 99 ~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~-- 176 (298)
|++++++|.+++.....+++..++.++.+++.++.|||+.|++|+||+|+||+++.++. ++|+|||.+........
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~--~~l~d~~~~~~~~~~~~~~ 158 (260)
T cd06606 81 EYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGV--VKLADFGCAKRLGDIETGE 158 (260)
T ss_pred EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCC--EEEcccccEEecccccccc
Confidence 99999999999988889999999999999999999999999999999999999998776 99999998875555443
Q ss_pred -CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHH
Q 022401 177 -PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECR 255 (298)
Q Consensus 177 -~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 255 (298)
.....++..|++||.......+.+ +|+||||++++++++|..||...... ......+.........+...++++.
T Consensus 159 ~~~~~~~~~~y~~pE~~~~~~~~~~-~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~ 234 (260)
T cd06606 159 GTGSVRGTPYWMAPEVIRGEEYGRA-ADIWSLGCTVIEMATGKPPWSELGNP---MAALYKIGSSGEPPEIPEHLSEEAK 234 (260)
T ss_pred cccCCCCCccccCHhhhcCCCCCch-hhHHHHHHHHHHHHhCCCCCCCCCch---HHHHHhccccCCCcCCCcccCHHHH
Confidence 345567889999999877776555 99999999999999999999886622 2222333322223333445689999
Q ss_pred HHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 256 DLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 256 ~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
+++.+||+.||.+||++ .++++|||+
T Consensus 235 ~~i~~~l~~~p~~Rp~~--------~~ll~~~~~ 260 (260)
T cd06606 235 DFLRKCLRRDPKKRPTA--------DELLQHPFL 260 (260)
T ss_pred HHHHHhCcCChhhCCCH--------HHHhhCCCC
Confidence 99999999999999977 666688885
No 163
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.5e-41 Score=289.82 Aligned_cols=256 Identities=23% Similarity=0.385 Sum_probs=205.9
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC--cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEec
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD--KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY 100 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~ 100 (298)
++|++++.||+|++|.||++++..++..+|+|.+.... .....+.+|+.++++++|+|++++++++..++.+++|+||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 47999999999999999999999899999999886532 2245688899999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHhh-cCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCC
Q 022401 101 ASGGELFERICNA---GRFSEDEARFFFQQLISGVSYCHA-MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ 176 (298)
Q Consensus 101 ~~~~sL~~~l~~~---~~~~~~~~~~i~~~l~~~l~~Lh~-~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~ 176 (298)
+++++|..++... ..+++..+..++.+++.|+.|||+ .|++|+||+|+||+++.++. ++|+|||++...... .
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~--~~l~dfg~~~~~~~~-~ 157 (286)
T cd06622 81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQ--VKLCDFGVSGNLVAS-L 157 (286)
T ss_pred cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCC--EEEeecCCcccccCC-c
Confidence 9999998888663 368999999999999999999996 59999999999999998776 999999987643222 2
Q ss_pred CCCCCCCCcccCccccccccC-----CCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCC
Q 022401 177 PKSTVGTPAYIAPEVLLRHEY-----DGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPIS 251 (298)
Q Consensus 177 ~~~~~~~~~~~aPE~~~~~~~-----~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (298)
.....++..|+|||.+.+... ...++|+||+|+++|++++|..||....... .......+...... ..+..++
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~ 235 (286)
T cd06622 158 AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN-IFAQLSAIVDGDPP-TLPSGYS 235 (286)
T ss_pred cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh-HHHHHHHHhhcCCC-CCCcccC
Confidence 233456778999998755432 2345999999999999999999997654322 22333333333221 2233478
Q ss_pred HHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 252 QECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 252 ~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
.++.+++.+||+.+|.+||++ .++++|||+..
T Consensus 236 ~~~~~li~~~l~~~p~~Rp~~--------~~l~~~~~~~~ 267 (286)
T cd06622 236 DDAQDFVAKCLNKIPNRRPTY--------AQLLEHPWLVK 267 (286)
T ss_pred HHHHHHHHHHcccCcccCCCH--------HHHhcChhhhh
Confidence 999999999999999999987 45557777653
No 164
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=4.8e-41 Score=287.50 Aligned_cols=255 Identities=26% Similarity=0.407 Sum_probs=205.5
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcC-CCCCeeeeeEEEEeC-----CeEE
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSL-RHPNIVRFKEVILTP-----THLA 95 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~-----~~~~ 95 (298)
.++|++.+.||+|++|.||++....+++.+++|.+.........+.+|+.+++++ +|||++++++++... ..++
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~ 100 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLW 100 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeE
Confidence 5789999999999999999999998999999999876655567778899999998 799999999998753 3689
Q ss_pred EEEeccCCCCHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccc
Q 022401 96 IVMEYASGGELFERIC----NAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSS 171 (298)
Q Consensus 96 lv~~~~~~~sL~~~l~----~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~ 171 (298)
+|+||+++++|.+++. ....+++..++.++.|++.||++||+.|++|+||+|+||+++.++. ++|+|||++...
T Consensus 101 lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~--~kl~dfg~~~~~ 178 (291)
T cd06639 101 LVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGG--VKLVDFGVSAQL 178 (291)
T ss_pred EEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCC--EEEeecccchhc
Confidence 9999999999998875 3456899999999999999999999999999999999999998877 999999987643
Q ss_pred cCCC-CCCCCCCCCcccCccccccccC----CCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHh-hcCCCCC
Q 022401 172 VLHS-QPKSTVGTPAYIAPEVLLRHEY----DGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRIL-SVQYSVP 245 (298)
Q Consensus 172 ~~~~-~~~~~~~~~~~~aPE~~~~~~~----~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~ 245 (298)
.... ......++..|+|||.+..... ...++|+||+|+++|+|++|..||.......... ++. .......
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~----~~~~~~~~~~~ 254 (291)
T cd06639 179 TSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLF----KIPRNPPPTLL 254 (291)
T ss_pred ccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHH----HHhcCCCCCCC
Confidence 3222 2233456788999998754321 2344999999999999999999998755432222 222 2222233
Q ss_pred CCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhh
Q 022401 246 DTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMF 290 (298)
Q Consensus 246 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~ 290 (298)
....++.++.++|.+||+.||++||++ .++++|||++
T Consensus 255 ~~~~~~~~l~~li~~~l~~~p~~Rps~--------~~il~~~~~~ 291 (291)
T cd06639 255 HPEKWCRSFNHFISQCLIKDFEARPSV--------THLLEHPFIK 291 (291)
T ss_pred cccccCHHHHHHHHHHhhcChhhCcCH--------HHHhcCcccC
Confidence 344467899999999999999999987 6666888874
No 165
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1.8e-41 Score=288.86 Aligned_cols=254 Identities=25% Similarity=0.399 Sum_probs=204.4
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcC-CCCCeeeeeEEEEe------CCe
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSL-RHPNIVRFKEVILT------PTH 93 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~------~~~ 93 (298)
..+.|++.+.||.|+||.||++++..+++.+++|++.........+..|+.+++++ +|+|++++++++.. ...
T Consensus 14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~ 93 (282)
T cd06636 14 PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQ 93 (282)
T ss_pred hhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCE
Confidence 44789999999999999999999998999999999887665566788899999988 69999999999853 457
Q ss_pred EEEEEeccCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccc
Q 022401 94 LAIVMEYASGGELFERICNA--GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSS 171 (298)
Q Consensus 94 ~~lv~~~~~~~sL~~~l~~~--~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~ 171 (298)
+++++||+.+++|.+++... ..+++..++.++.|++.|++|||+.|++|+||+|+||+++.++. ++|+|||++...
T Consensus 94 ~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~--~~l~dfg~~~~~ 171 (282)
T cd06636 94 LWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAE--VKLVDFGVSAQL 171 (282)
T ss_pred EEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCC--EEEeeCcchhhh
Confidence 89999999999999988653 35788889999999999999999999999999999999998887 999999987643
Q ss_pred cCC-CCCCCCCCCCcccCcccccc-----ccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCC
Q 022401 172 VLH-SQPKSTVGTPAYIAPEVLLR-----HEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVP 245 (298)
Q Consensus 172 ~~~-~~~~~~~~~~~~~aPE~~~~-----~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 245 (298)
... .......+++.|+|||.+.. ..++.+ +|+||||+++|+|++|..||......... ..+........
T Consensus 172 ~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~-~DvwslG~~l~el~~g~~p~~~~~~~~~~----~~~~~~~~~~~ 246 (282)
T cd06636 172 DRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYR-SDIWSLGITAIEMAEGAPPLCDMHPMRAL----FLIPRNPPPKL 246 (282)
T ss_pred hccccCCCcccccccccCHhhcCcccCcCcCCCcc-cchhHHHHHHHHHHhCCCCccccCHHhhh----hhHhhCCCCCC
Confidence 322 22234457888999998753 234444 99999999999999999999765432221 11222222222
Q ss_pred CCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 246 DTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 246 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
....++.++.++|.+||+.||.+|||+ .+++.|||+
T Consensus 247 ~~~~~~~~~~~li~~cl~~~p~~Rp~~--------~ell~~~~~ 282 (282)
T cd06636 247 KSKKWSKKFIDFIEGCLVKNYLSRPST--------EQLLKHPFI 282 (282)
T ss_pred cccccCHHHHHHHHHHhCCChhhCcCH--------HHHhcCCCC
Confidence 233578999999999999999999987 555678885
No 166
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=3.5e-41 Score=284.41 Aligned_cols=250 Identities=27% Similarity=0.400 Sum_probs=204.0
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc-------chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEE
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK-------IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAI 96 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~-------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 96 (298)
+|++.+.||+|+||.||++... +++.+|+|.+..... ....+.+|+.++++++|+|++++.+++.+...+++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 79 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTN-QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISI 79 (265)
T ss_pred CccccceEeccCCeEEEEEEEc-CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEE
Confidence 5889999999999999999874 678899998865321 12457789999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccC---
Q 022401 97 VMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL--- 173 (298)
Q Consensus 97 v~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~--- 173 (298)
++||+++++|.+++....++++..+..++.|++.++++||+.+++|+||+|+||++++++. ++|+|||++.....
T Consensus 80 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~--~~l~dfg~~~~~~~~~~ 157 (265)
T cd06631 80 FMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGI--IKLIDFGCARRLAWVGL 157 (265)
T ss_pred EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCe--EEeccchhhHhhhhccc
Confidence 9999999999999988788899999999999999999999999999999999999998877 99999998764321
Q ss_pred ----CCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhc-CCCCCCCC
Q 022401 174 ----HSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSV-QYSVPDTN 248 (298)
Q Consensus 174 ----~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 248 (298)
........++..|+|||.+.+..++.+ +|+||||++++++++|..||...+..... ..+... ........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~-~Dv~slG~~~~~l~~g~~p~~~~~~~~~~----~~~~~~~~~~~~~~~ 232 (265)
T cd06631 158 HGTHSNMLKSMHGTPYWMAPEVINESGYGRK-SDIWSIGCTVFEMATGKPPLASMDRLAAM----FYIGAHRGLMPRLPD 232 (265)
T ss_pred cccccccccccCCCccccChhhhcCCCCcch-hhHHHHHHHHHHHHhCCCccccCChHHHH----HHhhhccCCCCCCCC
Confidence 111123457788999999887777665 99999999999999999999765432221 111111 11122334
Q ss_pred CCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 249 PISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 249 ~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
.++.++.+++.+||+.+|.+||++ .++++|||+
T Consensus 233 ~~~~~~~~~i~~~l~~~p~~Rp~~--------~~~l~~~~~ 265 (265)
T cd06631 233 SFSAAAIDFVTSCLTRDQHERPSA--------LQLLRHDFL 265 (265)
T ss_pred CCCHHHHHHHHHHhcCCcccCCCH--------HHHhcCCCC
Confidence 578999999999999999999987 566678885
No 167
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=2.6e-41 Score=287.90 Aligned_cols=253 Identities=26% Similarity=0.398 Sum_probs=204.5
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC-cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEeccC
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD-KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYAS 102 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~ 102 (298)
-|++.+.||+|++|.||++.+..++..+++|.+.... .....+.+|+.+++.++|||++++++++...+..++|+||++
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~ 85 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA 85 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecC
Confidence 4789999999999999999999889999999886543 334567889999999999999999999999999999999999
Q ss_pred CCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC-CCCCCC
Q 022401 103 GGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH-SQPKST 180 (298)
Q Consensus 103 ~~sL~~~l~~-~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~-~~~~~~ 180 (298)
+++|...+.. ..++++..+..++.|++.||.|||+.|++|+||+|+||+++.++. ++|+|||++...... ......
T Consensus 86 ~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~--~kl~dfg~~~~~~~~~~~~~~~ 163 (282)
T cd06643 86 GGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGD--IKLADFGVSAKNTRTIQRRDSF 163 (282)
T ss_pred CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCC--EEEccccccccccccccccccc
Confidence 9999888754 457899999999999999999999999999999999999998887 999999987643222 222334
Q ss_pred CCCCcccCcccccc-----ccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHH
Q 022401 181 VGTPAYIAPEVLLR-----HEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECR 255 (298)
Q Consensus 181 ~~~~~~~aPE~~~~-----~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 255 (298)
.++..|+|||.+.. ..++ .++|+||+|+++|+|++|..||...+..... .............+..++.++.
T Consensus 164 ~~~~~y~aPE~~~~~~~~~~~~~-~~~Dv~slGvil~el~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 239 (282)
T cd06643 164 IGTPYWMAPEVVMCETSKDRPYD-YKADVWSLGITLIEMAQIEPPHHELNPMRVL---LKIAKSEPPTLAQPSRWSSEFK 239 (282)
T ss_pred cccccccCHhhccccCCCCCCCC-ccchhhhHHHHHHHHccCCCCccccCHHHHH---HHHhhcCCCCCCCccccCHHHH
Confidence 57888999998742 2333 3499999999999999999999875432221 1111222223334445789999
Q ss_pred HHHHHhhhhCCCCcccccccchhhhHHHhhhhhhh
Q 022401 256 DLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMF 290 (298)
Q Consensus 256 ~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~ 290 (298)
+++.+||+.||.+||++ .++++|||+.
T Consensus 240 ~li~~~l~~~p~~Rp~~--------~~il~~~~~~ 266 (282)
T cd06643 240 DFLKKCLEKNVDARWTT--------TQLLQHPFVT 266 (282)
T ss_pred HHHHHHccCChhhCcCH--------HHHhcCCCEe
Confidence 99999999999999987 4555777765
No 168
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-42 Score=282.67 Aligned_cols=256 Identities=29% Similarity=0.447 Sum_probs=217.5
Q ss_pred EeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcc-hHHHHHHHHHHhcC-CCCCeeeeeEEEEeCCeEEEEEeccCCCC
Q 022401 28 VRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKI-DENVQREIINHRSL-RHPNIVRFKEVILTPTHLAIVMEYASGGE 105 (298)
Q Consensus 28 ~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~~~~~~~s 105 (298)
.+.||+|+++.|-.+....++..||||++.+.... ..++.+|++++.+. .|+||+.++++|+++..+|+|||-+.||+
T Consensus 83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGp 162 (463)
T KOG0607|consen 83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGP 162 (463)
T ss_pred HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCch
Confidence 36799999999999999999999999999887544 46788999999888 59999999999999999999999999999
Q ss_pred HHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeC-CCCCCEEEeecCccccccCCC--------C
Q 022401 106 LFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDG-SPAPRLKICDFGYSKSSVLHS--------Q 176 (298)
Q Consensus 106 L~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~-~~~~~~~l~d~~~~~~~~~~~--------~ 176 (298)
|.+.+.+...+++.+..++.++|+.||++||++||.||||||+|||... +.-..+||+||++........ .
T Consensus 163 lLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~ 242 (463)
T KOG0607|consen 163 LLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPE 242 (463)
T ss_pred HHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCcc
Confidence 9999999999999999999999999999999999999999999999953 334459999999875332221 1
Q ss_pred CCCCCCCCcccCccccc----cccCCCCccchHHHHHHHHHHHhCCCCCCCCCCch-----------hHHHHHHHHhhcC
Q 022401 177 PKSTVGTPAYIAPEVLL----RHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPK-----------DFRKTIQRILSVQ 241 (298)
Q Consensus 177 ~~~~~~~~~~~aPE~~~----~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~-----------~~~~~~~~~~~~~ 241 (298)
..+..|+..|||||+.. ...++.+++|.||||+++|-|+.|..||.+....+ .-.++...|+.+.
T Consensus 243 L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGk 322 (463)
T KOG0607|consen 243 LLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGK 322 (463)
T ss_pred ccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccC
Confidence 13345777899999753 34566777999999999999999999998765432 4567888889998
Q ss_pred CCCCCC--CCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 242 YSVPDT--NPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 242 ~~~~~~--~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
+..|.. ..++.+..++++.+|..|+.+|.++ ..+++|||++.
T Consensus 323 YeFPdkdWahIS~eakdlisnLlvrda~~rlsa--------~~vlnhPw~~~ 366 (463)
T KOG0607|consen 323 YEFPDKDWAHISSEAKDLISNLLVRDAKQRLSA--------AQVLNHPWVQR 366 (463)
T ss_pred CcCChhhhHHhhHHHHHHHHHHHhccHHhhhhh--------hhccCCccccc
Confidence 887753 4689999999999999999999966 77778999874
No 169
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.4e-41 Score=289.56 Aligned_cols=250 Identities=23% Similarity=0.346 Sum_probs=204.3
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccCC-----cEEEEEEeecCC--cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCe
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVTK-----ELVAVKYIERGD--KIDENVQREIINHRSLRHPNIVRFKEVILTPTH 93 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~-----~~~aiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 93 (298)
..++|++.+.||+|++|.||.+.....+ ..+++|.+.... .....+.+|+.++++++||||+++++++.....
T Consensus 3 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~ 82 (283)
T cd05048 3 PLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQP 82 (283)
T ss_pred ChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCc
Confidence 4468999999999999999999976544 679999876433 234568899999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCC
Q 022401 94 LAIVMEYASGGELFERICNA----------------GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPA 157 (298)
Q Consensus 94 ~~lv~~~~~~~sL~~~l~~~----------------~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~ 157 (298)
.++++||+++++|.+++... ..++...++.++.|++.||.|||++|++|+||+|+||++++++.
T Consensus 83 ~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~ 162 (283)
T cd05048 83 TCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLT 162 (283)
T ss_pred eEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCc
Confidence 99999999999999998654 34788899999999999999999999999999999999998877
Q ss_pred CCEEEeecCccccccCCC---CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHH
Q 022401 158 PRLKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKT 233 (298)
Q Consensus 158 ~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~ 233 (298)
++|+|||++....... ......+++.|+|||.+.+..++.+ +||||||+++|+|++ |..||...... +.
T Consensus 163 --~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-sDv~slG~il~el~~~g~~p~~~~~~~----~~ 235 (283)
T cd05048 163 --VKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTE-SDIWSFGVVLWEIFSYGLQPYYGFSNQ----EV 235 (283)
T ss_pred --EEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchh-hhHHHHHHHHHHHHcCCCCCCCCCCHH----HH
Confidence 9999999886432221 1223345678999999877777665 999999999999998 99999875542 22
Q ss_pred HHHHhhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchh
Q 022401 234 IQRILSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
...+.... ..+.+..+|+++.+++.+||+.||.+||++.+++++
T Consensus 236 ~~~i~~~~-~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 236 IEMIRSRQ-LLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred HHHHHcCC-cCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 33333322 223345689999999999999999999999988864
No 170
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.9e-41 Score=289.09 Aligned_cols=258 Identities=23% Similarity=0.405 Sum_probs=209.9
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC--cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEE
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD--KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
..++|++.+.||+|++|.||++.+..+++.+++|++.... .....+.+|+++++.++|||++++++++.....+++|+
T Consensus 3 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (284)
T cd06620 3 RNEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCM 82 (284)
T ss_pred cHHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEE
Confidence 4578999999999999999999999889999999876543 33467889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhh-cCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCC
Q 022401 99 EYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA-MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP 177 (298)
Q Consensus 99 ~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~-~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~ 177 (298)
||+++++|.+++...+.++...+..++.+++.++.|||+ .+++|+||+|+||+++.++. ++|+|||++...... ..
T Consensus 83 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~--~~l~d~gl~~~~~~~-~~ 159 (284)
T cd06620 83 EFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQ--IKLCDFGVSGELINS-IA 159 (284)
T ss_pred ecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCc--EEEccCCcccchhhh-cc
Confidence 999999999999888889999999999999999999997 68999999999999998876 999999987643222 12
Q ss_pred CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCc-------hhHHHHHHHHhhcCCCCCCCCCC
Q 022401 178 KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEP-------KDFRKTIQRILSVQYSVPDTNPI 250 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 250 (298)
....++..|+|||.+.+..++.+ +|+||+|+++|++++|..||...... ..+......+.............
T Consensus 160 ~~~~~~~~~~aPE~~~~~~~~~~-~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd06620 160 DTFVGTSTYMSPERIQGGKYTVK-SDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDF 238 (284)
T ss_pred CccccCcccCCHHHHccCCCCcc-chHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhc
Confidence 23467889999999877766666 99999999999999999999865432 11122333333322211112236
Q ss_pred CHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhh
Q 022401 251 SQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMF 290 (298)
Q Consensus 251 ~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~ 290 (298)
+.++.+|+.+||+.||.+|||+.+ ++.|||+.
T Consensus 239 ~~~~~~li~~~l~~dp~~Rpt~~e--------~~~~~~~~ 270 (284)
T cd06620 239 PEDLRDFVDACLLKDPTERPTPQQ--------LCAMPPFI 270 (284)
T ss_pred CHHHHHHHHHHhcCCcccCcCHHH--------HhcCcccc
Confidence 889999999999999999998854 45666664
No 171
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=9.6e-41 Score=280.27 Aligned_cols=246 Identities=30% Similarity=0.481 Sum_probs=205.6
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC---CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEec
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG---DKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY 100 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~ 100 (298)
+|++++.||.|++|.||.+++..++..+++|.+... ......+.+|+.++++++|+|++++++++.+...+++++||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 599999999999999999999999999999987653 33345678999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC-CC
Q 022401 101 ASGGELFERICNA--GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-QP 177 (298)
Q Consensus 101 ~~~~sL~~~l~~~--~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~-~~ 177 (298)
+++++|.+.+... ..++..++..++.+++.++.+||+.|++|+||+|+||+++.++. ++|+|||++....... ..
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~--~kl~d~~~~~~~~~~~~~~ 158 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGL--IKLGDFGISKILGSEYSMA 158 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCC--EEECcCcceEEcccccccc
Confidence 9999999999765 46899999999999999999999999999999999999998887 9999999886443332 22
Q ss_pred CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHH
Q 022401 178 KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDL 257 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (298)
....+++.|.|||.+.+..++.+ +|+||+|+++++|++|..||..... .+....+..+.... .....+.++.++
T Consensus 159 ~~~~~~~~y~ape~~~~~~~~~~-~Dv~slG~i~~~l~~g~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~ 232 (256)
T cd08221 159 ETVVGTPYYMSPELCQGVKYNFK-SDIWALGCVLYELLTLKRTFDATNP----LNLVVKIVQGNYTP-VVSVYSSELISL 232 (256)
T ss_pred cccCCCccccCHhhcCCCCCCCc-chhHHHHHHHHHHHHCCCCCCCCCH----HHHHHHHHcCCCCC-CccccCHHHHHH
Confidence 34457889999999877776555 9999999999999999999976543 23333333333332 234578999999
Q ss_pred HHHhhhhCCCCcccccccch
Q 022401 258 ISRIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 258 i~~~l~~dp~~Rps~~~~l~ 277 (298)
+.+||..||.+||++.++++
T Consensus 233 i~~~l~~~p~~R~s~~~ll~ 252 (256)
T cd08221 233 VHSLLQQDPEKRPTADEVLD 252 (256)
T ss_pred HHHHcccCcccCCCHHHHhh
Confidence 99999999999998855553
No 172
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-43 Score=295.14 Aligned_cols=266 Identities=27% Similarity=0.363 Sum_probs=236.0
Q ss_pred CCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC----CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeE
Q 022401 19 MHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG----DKIDENVQREIINHRSLRHPNIVRFKEVILTPTHL 94 (298)
Q Consensus 19 ~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 94 (298)
....+.|+..++||.||||.||.++.+.+|+.||+|.+.+. ........+|..++.+++.+.||.+-..++....+
T Consensus 181 pvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~L 260 (591)
T KOG0986|consen 181 PVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDAL 260 (591)
T ss_pred hccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCce
Confidence 34557899999999999999999999999999999987653 23334567899999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCcccccc
Q 022401 95 AIVMEYASGGELFERICNAG--RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 172 (298)
Q Consensus 95 ~lv~~~~~~~sL~~~l~~~~--~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~ 172 (298)
|+|+..|+||+|.-++.+-+ .+++..+..++.+|+.||++||+.+||+||+||+|||+|++|+ ++|+|+|+|....
T Consensus 261 ClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~Gh--vRISDLGLAvei~ 338 (591)
T KOG0986|consen 261 CLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGH--VRISDLGLAVEIP 338 (591)
T ss_pred EEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCC--eEeeccceEEecC
Confidence 99999999999998887765 7999999999999999999999999999999999999999999 9999999999888
Q ss_pred CCCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCH
Q 022401 173 LHSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQ 252 (298)
Q Consensus 173 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (298)
.........||..|||||++.+..|+.. .|.|||||++|+|+.|+.||....+.....++.+++.+....++ ...++
T Consensus 339 ~g~~~~~rvGT~GYMAPEvl~ne~Y~~s-~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~--~kFS~ 415 (591)
T KOG0986|consen 339 EGKPIRGRVGTVGYMAPEVLQNEVYDFS-PDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYS--DKFSE 415 (591)
T ss_pred CCCccccccCcccccCHHHHcCCcccCC-ccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcc--cccCH
Confidence 7777777799999999999999998777 99999999999999999999998776666677777777666666 44899
Q ss_pred HHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 253 ECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 253 ~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
+..++.+.+|++||.+|.....- -...+-+|||+.+.
T Consensus 416 eakslc~~LL~Kdp~~RLGcrg~---ga~evk~HpfFk~l 452 (591)
T KOG0986|consen 416 EAKSLCEGLLTKDPEKRLGCRGE---GAQEVKEHPFFKDL 452 (591)
T ss_pred HHHHHHHHHHccCHHHhccCCCc---CcchhhhCcccccC
Confidence 99999999999999999987644 46788899999873
No 173
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=3.6e-41 Score=284.57 Aligned_cols=251 Identities=27% Similarity=0.408 Sum_probs=204.3
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC----CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEE
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG----DKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
++|++.+.||+|+||.||++++..+++.+++|.+... ......+.+|+.++++++|||++++++++...+..++++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 6899999999999999999999989999999987542 233345788999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC
Q 022401 99 EYASGGELFERICN----AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH 174 (298)
Q Consensus 99 ~~~~~~sL~~~l~~----~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~ 174 (298)
||+++++|.+++.. ...+++..+..++.+++.|+.|||++|++|+||+|+||+++.++. ++|+|||++......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~--~~l~d~g~~~~~~~~ 159 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGV--VKLGDLGLGRFFSSK 159 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCC--EEECccccceeccch
Confidence 99999999888753 345789999999999999999999999999999999999998887 999999987643322
Q ss_pred CC-CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHH
Q 022401 175 SQ-PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQE 253 (298)
Q Consensus 175 ~~-~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (298)
.. .....+++.|+|||.+.+...+.+ +|+||+|+++|++++|..||...... .......+.............+..
T Consensus 160 ~~~~~~~~~~~~~~aPE~~~~~~~~~~-~Di~slG~~l~el~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 236 (267)
T cd08228 160 TTAAHSLVGTPYYMSPERIHENGYNFK-SDIWSLGCLLYEMAALQSPFYGDKMN--LFSLCQKIEQCDYPPLPTEHYSEK 236 (267)
T ss_pred hHHHhcCCCCccccChhhhccCCCCch-hhHHHHHHHHHHHhcCCCCCcccccc--HHHHHHHHhcCCCCCCChhhcCHH
Confidence 21 123457788999999887777665 99999999999999999998654321 122333333322221222346789
Q ss_pred HHHHHHHhhhhCCCCcccccccchh
Q 022401 254 CRDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 254 l~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
+.+++.+||+.+|.+||++.++++.
T Consensus 237 ~~~li~~cl~~~p~~Rp~~~~vl~~ 261 (267)
T cd08228 237 LRELVSMCIYPDPDQRPDIGYVHQI 261 (267)
T ss_pred HHHHHHHHCCCCcccCcCHHHHHHH
Confidence 9999999999999999999998864
No 174
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-42 Score=312.37 Aligned_cols=263 Identities=27% Similarity=0.402 Sum_probs=219.1
Q ss_pred CCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC-CcchHHHHHHHHHHhcCC-CCCeeeeeEE-EEe---C--
Q 022401 20 HDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG-DKIDENVQREIINHRSLR-HPNIVRFKEV-ILT---P-- 91 (298)
Q Consensus 20 ~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~-~~~~~~~~~e~~~l~~l~-h~~i~~~~~~-~~~---~-- 91 (298)
+...+++|.+.|.+|||+.||+|++...|..||+|+.... ......+++|+.+++.|+ |+|||.+++. ... +
T Consensus 34 Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~ 113 (738)
T KOG1989|consen 34 VGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNG 113 (738)
T ss_pred ECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCc
Confidence 3456789999999999999999999988789999987654 344567889999999996 9999999994 221 1
Q ss_pred -CeEEEEEeccCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHhhcC--cEEecCCCCceEeeCCCCCCEEEeecC
Q 022401 92 -THLAIVMEYASGGELFERICNA--GRFSEDEARFFFQQLISGVSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICDFG 166 (298)
Q Consensus 92 -~~~~lv~~~~~~~sL~~~l~~~--~~~~~~~~~~i~~~l~~~l~~Lh~~~--i~H~dl~p~nilv~~~~~~~~~l~d~~ 166 (298)
-.++++||||.|+.|-+++... ..+++.++++|+.++++|+.+||... ++|||||-+|||++.+++ +||||||
T Consensus 114 ~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~--~KLCDFG 191 (738)
T KOG1989|consen 114 VWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGN--YKLCDFG 191 (738)
T ss_pred eeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCC--EEeCccc
Confidence 2578999999999999999743 35999999999999999999999888 999999999999999998 9999999
Q ss_pred ccccccCCCCC----------CCCCCCCcccCcccccc--ccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHH
Q 022401 167 YSKSSVLHSQP----------KSTVGTPAYIAPEVLLR--HEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTI 234 (298)
Q Consensus 167 ~~~~~~~~~~~----------~~~~~~~~~~aPE~~~~--~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~ 234 (298)
.++........ -....|+.|.|||++.- +....+++|||+|||+||.|.....||......
T Consensus 192 Satt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l------- 264 (738)
T KOG1989|consen 192 SATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL------- 264 (738)
T ss_pred ccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce-------
Confidence 98744333311 12247899999999753 223345599999999999999999999987542
Q ss_pred HHHhhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 235 QRILSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
.|+++.+.+|....+++.+.+||+.||+.||.+||++.|+++..+...--++++.+.
T Consensus 265 -aIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~~~~~~ 321 (738)
T KOG1989|consen 265 -AILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPCPIPDI 321 (738)
T ss_pred -eEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCCCcccc
Confidence 477889999998889999999999999999999999999998888777777766544
No 175
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=5.2e-41 Score=282.76 Aligned_cols=250 Identities=22% Similarity=0.363 Sum_probs=205.3
Q ss_pred CCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEE
Q 022401 19 MHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 19 ~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
.+..++|++.+.||+|++|.||++... ++..+++|.+.......+.+.+|+.++++++|+|++++++++...+..++++
T Consensus 2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (261)
T cd05072 2 EIPRESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIIT 80 (261)
T ss_pred cCchHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEE
Confidence 345678999999999999999999875 4567999988766555678899999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCC
Q 022401 99 EYASGGELFERICN--AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ 176 (298)
Q Consensus 99 ~~~~~~sL~~~l~~--~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~ 176 (298)
|++.+++|.+++.. ...++...+..++.+++.|++|||+.+++|+||+|+||+++.++. ++|+|||++........
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~--~~l~dfg~~~~~~~~~~ 158 (261)
T cd05072 81 EYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLM--CKIADFGLARVIEDNEY 158 (261)
T ss_pred ecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCc--EEECCCccceecCCCce
Confidence 99999999999864 345788999999999999999999999999999999999998887 99999999874432221
Q ss_pred --CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHH
Q 022401 177 --PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQE 253 (298)
Q Consensus 177 --~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (298)
.....++..|+|||.+....++.+ +||||||+++|+|++ |..||....... ....+.. ....+....++.+
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~~l~~l~t~g~~p~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~ 232 (261)
T cd05072 159 TAREGAKFPIKWTAPEAINFGSFTIK-SDVWSFGILLYEIVTYGKIPYPGMSNSD----VMSALQR-GYRMPRMENCPDE 232 (261)
T ss_pred eccCCCccceecCCHHHhccCCCChh-hhhhhhHHHHHHHHccCCCCCCCCCHHH----HHHHHHc-CCCCCCCCCCCHH
Confidence 112234567999999877776555 999999999999998 899997654322 2222222 2333444557899
Q ss_pred HHHHHHHhhhhCCCCcccccccch
Q 022401 254 CRDLISRIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 254 l~~li~~~l~~dp~~Rps~~~~l~ 277 (298)
+.+++.+||+.||++||++.++..
T Consensus 233 ~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 233 LYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred HHHHHHHHccCCcccCcCHHHHHH
Confidence 999999999999999999988764
No 176
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4e-41 Score=302.59 Aligned_cols=255 Identities=19% Similarity=0.220 Sum_probs=198.0
Q ss_pred CCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEe
Q 022401 20 HDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVME 99 (298)
Q Consensus 20 ~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~ 99 (298)
.....|.+.+.||+|+||.||++.+..+++.|++|... ...+.+|+.++++++|+||+++++++..++..+++++
T Consensus 166 ~~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~-----~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e 240 (461)
T PHA03211 166 VAGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW-----YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLP 240 (461)
T ss_pred cccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc-----ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEE
Confidence 34568999999999999999999999899999999532 2345789999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCC--
Q 022401 100 YASGGELFERICNA-GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ-- 176 (298)
Q Consensus 100 ~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~-- 176 (298)
++. ++|..++... ..++..+++.++.|++.||.|||+.|++|+||||+||+++.++. ++|+|||++........
T Consensus 241 ~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~--vkL~DFGla~~~~~~~~~~ 317 (461)
T PHA03211 241 KYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPED--ICLGDFGAACFARGSWSTP 317 (461)
T ss_pred ccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCC--EEEcccCCceecccccccc
Confidence 995 5777777553 46899999999999999999999999999999999999998877 99999999864322211
Q ss_pred -CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCC-CCCCC------chhHHHHHHHHhhcCC------
Q 022401 177 -PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPF-EDPDE------PKDFRKTIQRILSVQY------ 242 (298)
Q Consensus 177 -~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf-~~~~~------~~~~~~~~~~~~~~~~------ 242 (298)
.....++..|+|||++.+..++.+ +|||||||++|||++|..|+ ..... ...+...++.......
T Consensus 318 ~~~~~~GT~~Y~APE~~~~~~~~~~-sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~ 396 (461)
T PHA03211 318 FHYGIAGTVDTNAPEVLAGDPYTPS-VDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHA 396 (461)
T ss_pred cccccCCCcCCcCHHHHcCCCCCch-HHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCc
Confidence 123458899999999988777665 99999999999999987654 22211 1122222222110000
Q ss_pred -----------------------CCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 243 -----------------------SVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 243 -----------------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
.+.....++.++.+||.+||+.||.+|||+ .+++.|||+++
T Consensus 397 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa--------~elL~hp~f~~ 460 (461)
T PHA03211 397 GSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSA--------AELLRLPLFQS 460 (461)
T ss_pred chHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCH--------HHHhhCcccCC
Confidence 001111345689999999999999999987 56668888864
No 177
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=9.7e-41 Score=281.17 Aligned_cols=249 Identities=24% Similarity=0.320 Sum_probs=204.6
Q ss_pred CCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEe
Q 022401 20 HDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVME 99 (298)
Q Consensus 20 ~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~ 99 (298)
+..++|++.+.||+|++|.||++.... ++.+++|.+.........+.+|+.++++++|||++++++++...+..++++|
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~-~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (261)
T cd05068 3 IDRTSIQLLRKLGAGQFGEVWEGLWNN-TTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTE 81 (261)
T ss_pred cchhheeeEEEecccCCccEEEEEecC-CeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeee
Confidence 456789999999999999999998764 5679999987665556778899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCC
Q 022401 100 YASGGELFERICNAG--RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP 177 (298)
Q Consensus 100 ~~~~~sL~~~l~~~~--~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~ 177 (298)
++.+++|.+++.... .++...+..++.+++.|+.+||+.|++|+||+|+||+++.++. ++|+|||++.........
T Consensus 82 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~--~~l~dfg~~~~~~~~~~~ 159 (261)
T cd05068 82 LMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNI--CKVADFGLARVIKEDIYE 159 (261)
T ss_pred cccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCC--EEECCcceEEEccCCccc
Confidence 999999999987654 6899999999999999999999999999999999999998887 999999988644322111
Q ss_pred CC--CCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHH
Q 022401 178 KS--TVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQEC 254 (298)
Q Consensus 178 ~~--~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (298)
.. ......|+|||...+..++.+ +|+||||++++++++ |..||........ ...+. .....+.....+.++
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~~l~el~t~g~~p~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~ 233 (261)
T cd05068 160 AREGAKFPIKWTAPEAALYNRFSIK-SDVWSFGILLTEIVTYGRMPYPGMTNAEV----LQQVD-QGYRMPCPPGCPKEL 233 (261)
T ss_pred ccCCCcCceeccCccccccCCCCch-hhHHHHHHHHHHHHhcCCCCCCCCCHHHH----HHHHH-cCCCCCCCCcCCHHH
Confidence 11 112357999999877777666 999999999999999 9999976553222 22222 222333444578999
Q ss_pred HHHHHHhhhhCCCCcccccccch
Q 022401 255 RDLISRIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 255 ~~li~~~l~~dp~~Rps~~~~l~ 277 (298)
.+++.+||+.||.+||++.+++.
T Consensus 234 ~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 234 YDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred HHHHHHHhhcCcccCCCHHHHHH
Confidence 99999999999999999988774
No 178
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-42 Score=295.01 Aligned_cols=258 Identities=36% Similarity=0.664 Sum_probs=226.1
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc---chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEE
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK---IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIV 97 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 97 (298)
+.+-|.+.+.||+|-|.+|.+|++.-+|..||||++.+... ....+.+|+..++-++||||++++++.-....+|+|
T Consensus 16 IAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLi 95 (864)
T KOG4717|consen 16 IAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLI 95 (864)
T ss_pred eeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEE
Confidence 34679999999999999999999999999999999987532 235678999999999999999999999888899999
Q ss_pred EeccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEe-eCCCCCCEEEeecCccccccCCC
Q 022401 98 MEYASGGELFERICNA-GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLL-DGSPAPRLKICDFGYSKSSVLHS 175 (298)
Q Consensus 98 ~~~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv-~~~~~~~~~l~d~~~~~~~~~~~ 175 (298)
.|.-++|+|.+++-.. ..+++....+++.||+.||.|+|+..+|||||||+||.+ ..-|- +||.|||++-...+..
T Consensus 96 LELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGl--VKLTDFGFSNkf~PG~ 173 (864)
T KOG4717|consen 96 LELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGL--VKLTDFGFSNKFQPGK 173 (864)
T ss_pred EEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCc--eEeeeccccccCCCcc
Confidence 9999999999998544 358999999999999999999999999999999999866 55565 9999999998777777
Q ss_pred CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHH
Q 022401 176 QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECR 255 (298)
Q Consensus 176 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 255 (298)
.....+|+..|.|||++.+..|+.++.||||||+++|-+++|+.||+..++.+ .+..|+...+..|.. ++.+.+
T Consensus 174 kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSE----TLTmImDCKYtvPsh--vS~eCr 247 (864)
T KOG4717|consen 174 KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSE----TLTMIMDCKYTVPSH--VSKECR 247 (864)
T ss_pred hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchh----hhhhhhcccccCchh--hhHHHH
Confidence 77888999999999999999999999999999999999999999999988854 445566666665544 899999
Q ss_pred HHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhhhh
Q 022401 256 DLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDATE 294 (298)
Q Consensus 256 ~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~~~ 294 (298)
+||..||..||.+|.+.. .+-.|+|++..+.
T Consensus 248 dLI~sMLvRdPkkRAslE--------eI~s~~Wlq~~D~ 278 (864)
T KOG4717|consen 248 DLIQSMLVRDPKKRASLE--------EIVSTSWLQAGDR 278 (864)
T ss_pred HHHHHHHhcCchhhccHH--------HHhccccccCCCC
Confidence 999999999999999774 4557888886554
No 179
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=4.9e-41 Score=281.97 Aligned_cols=248 Identities=32% Similarity=0.500 Sum_probs=206.0
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC--CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEecc
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG--DKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYA 101 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~ 101 (298)
+|++.+.||.|++|.||.+++..++..+++|.+... ....+.+.+|+.++++++|+|++++.+.+.++..++++++|+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 589999999999999999999999999999988643 233466788999999999999999999999999999999999
Q ss_pred CCCCHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCC-CC
Q 022401 102 SGGELFERICN--AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ-PK 178 (298)
Q Consensus 102 ~~~sL~~~l~~--~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~-~~ 178 (298)
++++|.+.+.. ...+++..++.++.+++.|+.+||++|++|+||+|+||++++++. ++++|||.+........ ..
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~--~~l~dfg~~~~~~~~~~~~~ 158 (255)
T cd08219 81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGK--VKLGDFGSARLLTSPGAYAC 158 (255)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCc--EEEcccCcceeecccccccc
Confidence 99999988864 345789999999999999999999999999999999999998877 99999998864433222 22
Q ss_pred CCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHH
Q 022401 179 STVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLI 258 (298)
Q Consensus 179 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (298)
...++..|+|||.+.+..++.+ +|+||+|+++|+|++|..||...+. ......+...... +.+..++.++.+++
T Consensus 159 ~~~~~~~~~aPE~~~~~~~~~~-~Dv~slG~i~~~l~~g~~p~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~li 232 (255)
T cd08219 159 TYVGTPYYVPPEIWENMPYNNK-SDIWSLGCILYELCTLKHPFQANSW----KNLILKVCQGSYK-PLPSHYSYELRSLI 232 (255)
T ss_pred cccCCccccCHHHHccCCcCch-hhhhhhchhheehhhccCCCCCCCH----HHHHHHHhcCCCC-CCCcccCHHHHHHH
Confidence 3457788999999877776555 9999999999999999999986543 2223333333322 23345789999999
Q ss_pred HHhhhhCCCCcccccccchhh
Q 022401 259 SRIFVADPAAVSIFFFPLNMS 279 (298)
Q Consensus 259 ~~~l~~dp~~Rps~~~~l~~~ 279 (298)
.+||+.||.+|||+.+++...
T Consensus 233 ~~~l~~~P~~Rp~~~~il~~~ 253 (255)
T cd08219 233 KQMFKRNPRSRPSATTILSRG 253 (255)
T ss_pred HHHHhCCcccCCCHHHHhhcc
Confidence 999999999999999988654
No 180
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=3.2e-41 Score=290.31 Aligned_cols=252 Identities=24% Similarity=0.326 Sum_probs=201.0
Q ss_pred CCCCCeeEEeeeccCCeEEEEEEEEccCCcE--EEEEEeecC--CcchHHHHHHHHHHhcC-CCCCeeeeeEEEEeCCeE
Q 022401 20 HDSDRYDFVRDIGSGNFGVARLMRDKVTKEL--VAVKYIERG--DKIDENVQREIINHRSL-RHPNIVRFKEVILTPTHL 94 (298)
Q Consensus 20 ~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~--~aiK~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 94 (298)
+..++|++.+.||+|+||.||+|.++.++.. +++|..... ......+.+|+.++.++ +|+|++++++++..++.+
T Consensus 4 ~~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~ 83 (303)
T cd05088 4 LEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 83 (303)
T ss_pred cchhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCc
Confidence 4557899999999999999999998776654 466665432 22335678899999999 899999999999999999
Q ss_pred EEEEeccCCCCHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCC
Q 022401 95 AIVMEYASGGELFERICNAG----------------RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAP 158 (298)
Q Consensus 95 ~lv~~~~~~~sL~~~l~~~~----------------~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~ 158 (298)
++++||+++++|.+++.... .++..+++.++.|++.|++|||++|++|+||+|+||+++.++.
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~- 162 (303)
T cd05088 84 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYV- 162 (303)
T ss_pred eEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCc-
Confidence 99999999999999986432 4788999999999999999999999999999999999998876
Q ss_pred CEEEeecCccccccCCCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHH
Q 022401 159 RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRI 237 (298)
Q Consensus 159 ~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~ 237 (298)
++|+|||++..............+..|+|||...+..++.+ +||||||++++++++ |..||......+. ...+
T Consensus 163 -~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~ellt~g~~p~~~~~~~~~----~~~~ 236 (303)
T cd05088 163 -AKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTN-SDVWSYGVLLWEIVSLGGTPYCGMTCAEL----YEKL 236 (303)
T ss_pred -EEeCccccCcccchhhhcccCCCcccccCHHHHhccCCccc-ccchhhhhHHHHHHhcCCCCcccCChHHH----HHHH
Confidence 99999998763322222222334567999998876666555 999999999999998 9999976554322 2222
Q ss_pred hhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhh
Q 022401 238 LSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMS 279 (298)
Q Consensus 238 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~ 279 (298)
........+...+.++.+++.+||+.+|.+||++.+++.+.
T Consensus 237 -~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l 277 (303)
T cd05088 237 -PQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSL 277 (303)
T ss_pred -hcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 22222233344789999999999999999999999988754
No 181
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.4e-40 Score=280.83 Aligned_cols=251 Identities=30% Similarity=0.453 Sum_probs=203.1
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC------cchHHHHHHHHHHhcCCCCCeeeeeEEEEeC--CeE
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD------KIDENVQREIINHRSLRHPNIVRFKEVILTP--THL 94 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~ 94 (298)
.+|++.+.||+|++|.||.+.+..+++.|++|.+.... .....+.+|+.++++++|||++++++++.+. ..+
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 57999999999999999999999899999999876432 1234677899999999999999999998764 568
Q ss_pred EEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC
Q 022401 95 AIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH 174 (298)
Q Consensus 95 ~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~ 174 (298)
++++||+++++|.+++.....+++..+..++.+++.+|.+||+.+++|+||+|+||+++.++. ++|+|||++......
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~--~~l~Dfg~~~~~~~~ 159 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGN--VKLGDFGASKRLQTI 159 (265)
T ss_pred EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCC--EEECcCccccccccc
Confidence 899999999999999988778899999999999999999999999999999999999998887 999999987643221
Q ss_pred ----CCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCC
Q 022401 175 ----SQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPI 250 (298)
Q Consensus 175 ----~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (298)
.......++..|+|||.+.+...+.+ +|+||||+++|++++|..||....... ...+..........+...
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Dv~slG~il~el~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~ 234 (265)
T cd06652 160 CLSGTGMKSVTGTPYWMSPEVISGEGYGRK-ADIWSVGCTVVEMLTEKPPWAEFEAMA----AIFKIATQPTNPVLPPHV 234 (265)
T ss_pred cccccccccCCCCccccChhhhcCCCCCcc-hhHHHHHHHHHHHhhCCCCCCccchHH----HHHHHhcCCCCCCCchhh
Confidence 11122346778999999877766555 999999999999999999997654322 222222222222233446
Q ss_pred CHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 251 SQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 251 ~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
+..+.+++++|+ .+|.+||++ .++++|||+
T Consensus 235 ~~~~~~~i~~~l-~~p~~Rp~~--------~~il~~~~~ 264 (265)
T cd06652 235 SDHCRDFLKRIF-VEAKLRPSA--------DELLRHTFV 264 (265)
T ss_pred CHHHHHHHHHHh-cChhhCCCH--------HHHhcCccc
Confidence 788999999999 599999987 666688886
No 182
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=6.8e-42 Score=299.48 Aligned_cols=256 Identities=23% Similarity=0.365 Sum_probs=199.9
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC---cchHHHHHHHHHHhcCCCCCeeeeeEEEEeC------C
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD---KIDENVQREIINHRSLRHPNIVRFKEVILTP------T 92 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~ 92 (298)
.++|++++.||.|+||.||++.+..+++.||+|.+.... .....+.+|+.++++++||||+++++++... .
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFN 93 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccC
Confidence 478999999999999999999999899999999987532 2234567899999999999999999987543 3
Q ss_pred eEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCcccccc
Q 022401 93 HLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 172 (298)
Q Consensus 93 ~~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~ 172 (298)
..+++++++ +++|.+.+. ...+++..+..++.|++.||.|||+.|++|+||||+||+++.++. ++|+|||++....
T Consensus 94 ~~~~~~~~~-~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~--~kl~Dfg~~~~~~ 169 (343)
T cd07878 94 EVYLVTNLM-GADLNNIVK-CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCE--LRILDFGLARQAD 169 (343)
T ss_pred cEEEEeecC-CCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCC--EEEcCCccceecC
Confidence 578999988 678887764 456899999999999999999999999999999999999998887 9999999987543
Q ss_pred CCCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcC-----------
Q 022401 173 LHSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQ----------- 241 (298)
Q Consensus 173 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~----------- 241 (298)
. ......++..|+|||.+.+......++||||||+++|+|++|..||...+..+.+...........
T Consensus 170 ~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (343)
T cd07878 170 D--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEH 247 (343)
T ss_pred C--CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhh
Confidence 2 223345788999999987754445559999999999999999999987554333322221110000
Q ss_pred --------CCCC------CCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 242 --------YSVP------DTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 242 --------~~~~------~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
...+ .....++.+.+||.+||+.||.+|||+. ++++|||+..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~--------ell~hp~~~~ 303 (343)
T cd07878 248 ARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISAS--------EALAHPYFSQ 303 (343)
T ss_pred HHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHH--------HHhcCcchhc
Confidence 0000 0113567789999999999999999884 5556777763
No 183
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.7e-41 Score=288.43 Aligned_cols=257 Identities=26% Similarity=0.404 Sum_probs=209.0
Q ss_pred CCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC-cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEE
Q 022401 20 HDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD-KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 20 ~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
-...+|++.+.||+|++|.||++.+..+++.|++|.+.... ...+.+.+|+.+++.++|+|++++++++..+...++|+
T Consensus 16 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 95 (297)
T cd06656 16 DPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 95 (297)
T ss_pred ChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEee
Confidence 34478999999999999999999998889999999987643 23456778999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC-CC
Q 022401 99 EYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-QP 177 (298)
Q Consensus 99 ~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~-~~ 177 (298)
||+++++|.+++.+ ..++...+..++.+++.++.+||+.|++|+||+|+||+++.++. ++|+|||++....... ..
T Consensus 96 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~--~~l~Dfg~~~~~~~~~~~~ 172 (297)
T cd06656 96 EYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGS--VKLTDFGFCAQITPEQSKR 172 (297)
T ss_pred cccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCC--EEECcCccceEccCCccCc
Confidence 99999999998854 45789999999999999999999999999999999999998887 9999999876433222 12
Q ss_pred CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHH
Q 022401 178 KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDL 257 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (298)
....+++.|+|||.+.+..++.+ +|+||+|+++|++++|..||...+...... ............+..+++.+.++
T Consensus 173 ~~~~~~~~y~aPE~~~~~~~~~~-~Di~slGvil~~l~tg~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l 248 (297)
T cd06656 173 STMVGTPYWMAPEVVTRKAYGPK-VDIWSLGIMAIEMVEGEPPYLNENPLRALY---LIATNGTPELQNPERLSAVFRDF 248 (297)
T ss_pred CcccCCccccCHHHHcCCCCCcH-HHHHHHHHHHHHHHhCCCCCCCCCcchhee---eeccCCCCCCCCccccCHHHHHH
Confidence 23457788999999877766555 999999999999999999997654322111 11111222233344578999999
Q ss_pred HHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 258 ISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 258 i~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
+.+||..||.+||++ .++++|||+..
T Consensus 249 i~~~l~~~p~~Rps~--------~~il~~~~~~~ 274 (297)
T cd06656 249 LNRCLEMDVDRRGSA--------KELLQHPFLKL 274 (297)
T ss_pred HHHHccCChhhCcCH--------HHHhcCchhcc
Confidence 999999999999987 45557777764
No 184
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=6.7e-41 Score=281.46 Aligned_cols=248 Identities=24% Similarity=0.398 Sum_probs=202.9
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEec
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY 100 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~ 100 (298)
+.++|++.+.||+|++|.||.+.... +..+|+|.+.......+.+.+|+.++++++||||+++++++......++++||
T Consensus 2 ~~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd05113 2 DPKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEY 80 (256)
T ss_pred ChHHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEc
Confidence 45689999999999999999998764 44599998876655567789999999999999999999999988899999999
Q ss_pred cCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCC--C
Q 022401 101 ASGGELFERICNA-GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ--P 177 (298)
Q Consensus 101 ~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~--~ 177 (298)
+.+++|.+++... ..+++..++.++.|++.|++|||+.|++|+||+|.||+++.++. ++|+|||.+........ .
T Consensus 81 ~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~--~kl~d~g~~~~~~~~~~~~~ 158 (256)
T cd05113 81 MSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGC--VKVSDFGLSRYVLDDEYTSS 158 (256)
T ss_pred CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCC--EEECCCccceecCCCceeec
Confidence 9999999998764 36899999999999999999999999999999999999998776 99999998764322211 1
Q ss_pred CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHH
Q 022401 178 KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRD 256 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 256 (298)
....++..|+|||...+..++.+ +||||||+++|+|++ |..||...+..+ ....+.... ........+.++.+
T Consensus 159 ~~~~~~~~y~~pe~~~~~~~~~~-~Di~slG~~l~~l~~~g~~p~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~ 232 (256)
T cd05113 159 VGSKFPVRWSPPEVLLYSKFSSK-SDVWAFGVLMWEVYSLGKMPYERFNNSE----TVEKVSQGL-RLYRPHLASEKVYA 232 (256)
T ss_pred CCCccChhhCCHHHHhcCcccch-hHHHHHHHHHHHHhcCCCCCcCcCCHHH----HHHHHhcCC-CCCCCCCCCHHHHH
Confidence 11234567999999877776665 999999999999998 999998766432 222332222 22223346899999
Q ss_pred HHHHhhhhCCCCcccccccch
Q 022401 257 LISRIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 257 li~~~l~~dp~~Rps~~~~l~ 277 (298)
++.+||+.||.+||++.+++.
T Consensus 233 li~~cl~~~p~~Rp~~~~ll~ 253 (256)
T cd05113 233 IMYSCWHEKAEERPTFQQLLS 253 (256)
T ss_pred HHHHHcCCCcccCCCHHHHHH
Confidence 999999999999999988875
No 185
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=2.8e-41 Score=288.09 Aligned_cols=257 Identities=25% Similarity=0.436 Sum_probs=204.4
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc---chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEe
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK---IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVME 99 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~ 99 (298)
++|++.+.||+|++|.||++.+..+++.+|+|.+..... ..+.+.+|+.+++.++|||++++++++..++..++|+|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 479999999999999999999988899999998765322 34567889999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCC-CC
Q 022401 100 YASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ-PK 178 (298)
Q Consensus 100 ~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~-~~ 178 (298)
|+++++|..+......++...++.++.|++.++.|||+.|++|+||+|+||++++++. ++|+|||++........ ..
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~--~~l~dfg~~~~~~~~~~~~~ 158 (286)
T cd07846 81 FVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGV--VKLCDFGFARTLAAPGEVYT 158 (286)
T ss_pred cCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCc--EEEEeeeeeeeccCCccccC
Confidence 9999988887776667899999999999999999999999999999999999998887 99999998764333221 12
Q ss_pred CCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhc---------------CCC
Q 022401 179 STVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSV---------------QYS 243 (298)
Q Consensus 179 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~---------------~~~ 243 (298)
...++..|+|||.+.+......++||||||+++++|++|..||......+............ ...
T Consensus 159 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07846 159 DYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMR 238 (286)
T ss_pred cccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccc
Confidence 33467789999998765544455999999999999999999997655433222222111000 000
Q ss_pred CC----------CCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 244 VP----------DTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 244 ~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
.+ ....++..+.+++.+||+.||.+||++ .+++.|||+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~--------~~il~~~~~ 286 (286)
T cd07846 239 LPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSS--------SQLLHHEFF 286 (286)
T ss_pred cccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhH--------HHHhcCCCC
Confidence 00 122468899999999999999999988 455577775
No 186
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=7.3e-41 Score=285.57 Aligned_cols=255 Identities=27% Similarity=0.421 Sum_probs=202.8
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcC-CCCCeeeeeEEEE-----eCCeE
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSL-RHPNIVRFKEVIL-----TPTHL 94 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~-----~~~~~ 94 (298)
..++|++.+.||+|++|.||++.+..+++.+++|++.........+.+|+.+++++ +|||++++++++. .+..+
T Consensus 16 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~ 95 (286)
T cd06638 16 PSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQL 95 (286)
T ss_pred cccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeE
Confidence 55799999999999999999999998999999998876555556788899999999 6999999999874 34578
Q ss_pred EEEEeccCCCCHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCcccc
Q 022401 95 AIVMEYASGGELFERIC----NAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKS 170 (298)
Q Consensus 95 ~lv~~~~~~~sL~~~l~----~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~ 170 (298)
++++||+++++|.+++. ....+++..++.++.+++.|+.|||+.+++|+||+|+||+++.++. ++|+|||++..
T Consensus 96 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~--~kl~dfg~~~~ 173 (286)
T cd06638 96 WLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGG--VKLVDFGVSAQ 173 (286)
T ss_pred EEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCC--EEEccCCceee
Confidence 99999999999988774 2346888999999999999999999999999999999999998887 99999998864
Q ss_pred ccCCC-CCCCCCCCCcccCccccccc-----cCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCC
Q 022401 171 SVLHS-QPKSTVGTPAYIAPEVLLRH-----EYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSV 244 (298)
Q Consensus 171 ~~~~~-~~~~~~~~~~~~aPE~~~~~-----~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 244 (298)
..... ......++..|+|||.+... .++. ++|+||+|+++|+|++|..||........... .........
T Consensus 174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~-~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~---~~~~~~~~~ 249 (286)
T cd06638 174 LTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDA-RCDVWSLGITAIELGDGDPPLADLHPMRALFK---IPRNPPPTL 249 (286)
T ss_pred cccCCCccccccCCCcccChhhhchhhhccccccc-hhhhhhHHHHHHHHhcCCCCCCCCchhHHHhh---ccccCCCcc
Confidence 43222 22344578899999987532 2334 49999999999999999999987543222211 111111222
Q ss_pred CCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 245 PDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 245 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
..+..++.++.+++.+||+.||++|||+. ++++|||+
T Consensus 250 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~--------ell~~~~~ 286 (286)
T cd06638 250 HQPELWSNEFNDFIRKCLTKDYEKRPTVS--------DLLQHVFI 286 (286)
T ss_pred cCCCCcCHHHHHHHHHHccCCcccCCCHH--------HHhhcccC
Confidence 23344678999999999999999999884 45567764
No 187
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=9.7e-41 Score=280.24 Aligned_cols=250 Identities=28% Similarity=0.518 Sum_probs=206.4
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC---CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEec
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG---DKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY 100 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~ 100 (298)
+|++.+.||+|+||.+|.+++..+++.+++|.+... ......+.+|+.++++++|||++++.+++...+..++|+||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 699999999999999999999989999999998753 23335688999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCC-C
Q 022401 101 ASGGELFERICNAG--RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ-P 177 (298)
Q Consensus 101 ~~~~sL~~~l~~~~--~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~-~ 177 (298)
+.+++|.+.+.... .+++.++..++.|++.++.+||++|++|+||+|+||+++.++. ++|+|||++........ .
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~--~~l~d~~~~~~~~~~~~~~ 158 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGT--IKLGDFGIARVLNSTVELA 158 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCC--EEEeeccceeecCcchhhh
Confidence 99999999886543 5789999999999999999999999999999999999988877 99999998864433221 1
Q ss_pred CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHH
Q 022401 178 KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDL 257 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (298)
....+++.|+|||.+.+...+.+ +|+||+|++++++++|..||...+.. .....+..+... +.+...+.++.++
T Consensus 159 ~~~~~~~~~~~pe~~~~~~~~~~-~Dv~slG~i~~~l~~g~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~l 232 (256)
T cd08218 159 RTCIGTPYYLSPEICENRPYNNK-SDIWALGCVLYEMCTLKHAFEAGNMK----NLVLKIIRGSYP-PVSSHYSYDLRNL 232 (256)
T ss_pred hhccCCccccCHHHhCCCCCCCc-cchhHHHHHHHHHHcCCCCccCCCHH----HHHHHHhcCCCC-CCcccCCHHHHHH
Confidence 23346788999999877776655 99999999999999999999865432 223333333322 2334578999999
Q ss_pred HHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 258 ISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 258 i~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
|.+||+.+|.+||++ .+++.|||+
T Consensus 233 i~~~l~~~p~~Rp~~--------~~vl~~~~~ 256 (256)
T cd08218 233 VSQLFKRNPRDRPSV--------NSILEKNFI 256 (256)
T ss_pred HHHHhhCChhhCcCH--------HHHhhCcCC
Confidence 999999999999987 555578875
No 188
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=5e-41 Score=285.85 Aligned_cols=253 Identities=27% Similarity=0.414 Sum_probs=197.9
Q ss_pred eeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcc--hHHHHHHHHHHhcCC-CCCeeeeeEEEEeC--CeEEEEEe
Q 022401 25 YDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKI--DENVQREIINHRSLR-HPNIVRFKEVILTP--THLAIVME 99 (298)
Q Consensus 25 y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~--~~~~lv~~ 99 (298)
|++.+.||+|++|.||++.+..+++.+++|.+...... .....+|+..++++. |+|++++++++.++ +.+++|+|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 78899999999999999999989999999988654222 223456888888885 99999999999987 88999999
Q ss_pred ccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCCC
Q 022401 100 YASGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK 178 (298)
Q Consensus 100 ~~~~~sL~~~l~~-~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~~ 178 (298)
|+.+ ++.+.+.. ...+++.++..++.|++.||+|||+.|++|+||+|+||+++. +. ++|+|||++..........
T Consensus 81 ~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~--~kl~dfg~~~~~~~~~~~~ 156 (282)
T cd07831 81 LMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DI--LKLADFGSCRGIYSKPPYT 156 (282)
T ss_pred cCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CC--eEEEecccccccccCCCcC
Confidence 9975 77777755 457899999999999999999999999999999999999998 55 9999999987554433333
Q ss_pred CCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhh--------------cCCCC
Q 022401 179 STVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILS--------------VQYSV 244 (298)
Q Consensus 179 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~--------------~~~~~ 244 (298)
...++..|+|||.+........++|+||+|+++|+|++|..||...+..+........... .....
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (282)
T cd07831 157 EYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNF 236 (282)
T ss_pred CCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccC
Confidence 4457788999998765554455699999999999999999999876543332222111100 01111
Q ss_pred CC---------CCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 245 PD---------TNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 245 ~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
+. ....+.++.++|.+||+.||++|||+ .++++|||+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~--------~~~l~~~~~ 282 (282)
T cd07831 237 PSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITA--------KQALRHPYF 282 (282)
T ss_pred cccccccHHHHcccccHHHHHHHHHHhccCcccccCH--------HHHhhCCCC
Confidence 11 12467999999999999999999987 566678885
No 189
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=7.5e-41 Score=285.63 Aligned_cols=257 Identities=28% Similarity=0.457 Sum_probs=205.1
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC---CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEe
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG---DKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVME 99 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~ 99 (298)
++|++.+.||+|++|.||++.+..+++.|++|.+... ......+.+|++++++++|+|++++++++..++..++++|
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 4799999999999999999999988999999988653 3334678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC--CC
Q 022401 100 YASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS--QP 177 (298)
Q Consensus 100 ~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~--~~ 177 (298)
|++++++.........+++..++.++.+++.|+.|||+.|++|+||+|+||+++.++. ++|+|||++....... ..
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~--~kl~d~g~~~~~~~~~~~~~ 158 (288)
T cd07833 81 YVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGV--LKLCDFGFARALRARPASPL 158 (288)
T ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCC--EEEEeeecccccCCCccccc
Confidence 9998777766666677999999999999999999999999999999999999998877 9999999886544433 22
Q ss_pred CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcC------------C---
Q 022401 178 KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQ------------Y--- 242 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~------------~--- 242 (298)
....++..|+|||.+.+....+.++|+||+|+++|++++|..||...+..+.+........... .
T Consensus 159 ~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T cd07833 159 TDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGV 238 (288)
T ss_pred cCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcccccc
Confidence 3345678899999988773334459999999999999999999987654433222211110000 0
Q ss_pred CC-----------CCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 243 SV-----------PDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 243 ~~-----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
.. .....++.++.+|+.+||+.||.+|||+ .+++.|||+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~--------~~il~~~~f 288 (288)
T cd07833 239 AFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTC--------DELLQHPYF 288 (288)
T ss_pred ccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccH--------HHHhcCCCC
Confidence 00 0112248899999999999999999987 455567764
No 190
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=6.3e-41 Score=285.67 Aligned_cols=255 Identities=29% Similarity=0.450 Sum_probs=203.1
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc---chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEec
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK---IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY 100 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~ 100 (298)
+|++.+.||.|++|.||++.+..++..+++|.+..... ....+.+|+.++++++|||++++++++.+....++++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 48999999999999999999998999999998865432 235688999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC-CC
Q 022401 101 ASGGELFERICN--AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-QP 177 (298)
Q Consensus 101 ~~~~sL~~~l~~--~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~-~~ 177 (298)
+. ++|..++.. ...+++..+..++.+++.|++|||+.|++|+||+|+||+++.++. ++|+|||++....... ..
T Consensus 81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~--~~l~dfg~~~~~~~~~~~~ 157 (284)
T cd07860 81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTY 157 (284)
T ss_pred cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCC--EEEeeccchhhcccCcccc
Confidence 96 578888754 346899999999999999999999999999999999999998887 9999999876433221 12
Q ss_pred CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcC--------------CC
Q 022401 178 KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQ--------------YS 243 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~--------------~~ 243 (298)
....++..|+|||.+.+......++|+||||+++|++++|..||...+..+............. ..
T Consensus 158 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd07860 158 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPS 237 (284)
T ss_pred ccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhh
Confidence 2334577899999887766545569999999999999999999987665444333332211100 00
Q ss_pred CC---------CCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 244 VP---------DTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 244 ~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
.+ ....++.++.++|.+||+.||.+|||+ .+++.|||+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~--------~~~l~~~~f 284 (284)
T cd07860 238 FPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISA--------KAALAHPFF 284 (284)
T ss_pred cccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCH--------HHHhcCCCC
Confidence 00 012367899999999999999999988 555578885
No 191
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=1.9e-40 Score=284.22 Aligned_cols=262 Identities=27% Similarity=0.419 Sum_probs=204.9
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC---cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEe
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD---KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVME 99 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~ 99 (298)
++|++.+.||.|++|.||++.+..+++.+++|.+.... .....+.+|+.++++++|||++++++++.+...+++|+|
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 57999999999999999999999899999999886542 223567889999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC-C
Q 022401 100 YASGGELFERICNAGR--FSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-Q 176 (298)
Q Consensus 100 ~~~~~sL~~~l~~~~~--~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~-~ 176 (298)
|+++ +|.+.+..... .++..++.++.|++.||+|||++|++|+||+|+||+++.++. .++|+|||++....... .
T Consensus 82 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~-~~kl~dfg~~~~~~~~~~~ 159 (294)
T PLN00009 82 YLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTN-ALKLADFGLARAFGIPVRT 159 (294)
T ss_pred cccc-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCC-EEEEcccccccccCCCccc
Confidence 9965 77777755443 578889999999999999999999999999999999985443 38999999886443222 1
Q ss_pred CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCC--------------
Q 022401 177 PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQY-------------- 242 (298)
Q Consensus 177 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-------------- 242 (298)
.....+++.|+|||.+.+......++|+||+|+++|++++|..||......+...+..........
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (294)
T PLN00009 160 FTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKS 239 (294)
T ss_pred cccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhh
Confidence 223346788999998876554455599999999999999999999876544333332221111000
Q ss_pred ---CCC------CCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhhhh
Q 022401 243 ---SVP------DTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDATE 294 (298)
Q Consensus 243 ---~~~------~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~~~ 294 (298)
... .....++++.+++.+||+.||++||++ .++++|||+.+..+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~--------~~~l~~~~~~~~~~ 292 (294)
T PLN00009 240 AFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITA--------RAALEHEYFKDLGD 292 (294)
T ss_pred hcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCH--------HHHhcCchHhHHhc
Confidence 000 012367899999999999999999987 55567999987654
No 192
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.8e-40 Score=283.91 Aligned_cols=257 Identities=25% Similarity=0.366 Sum_probs=198.0
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC--cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEe
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD--KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVME 99 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~ 99 (298)
.++|++.+.||+|++|.||.+.+..+++.+++|.+.... .....+.+|+.+++.++|+|++++.+++..+...++|+|
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 83 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFE 83 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEe
Confidence 368999999999999999999999889999999986543 223457789999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC-CC
Q 022401 100 YASGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-QP 177 (298)
Q Consensus 100 ~~~~~sL~~~l~~-~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~-~~ 177 (298)
|+. +++.+.+.. ...++...+..++.|++.||.|||+.|++|+||+|+||+++.++. ++|+|||++....... ..
T Consensus 84 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~--~~l~Dfg~~~~~~~~~~~~ 160 (291)
T cd07870 84 YMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGE--LKLADFGLARAKSIPSQTY 160 (291)
T ss_pred ccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCc--EEEeccccccccCCCCCCC
Confidence 996 566666543 456788899999999999999999999999999999999998887 9999999886433222 12
Q ss_pred CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcC----------------
Q 022401 178 KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQ---------------- 241 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~---------------- 241 (298)
....+++.|+|||.+.+......++|+||||+++|++++|..||....................
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (291)
T cd07870 161 SSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKP 240 (291)
T ss_pred CCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccc
Confidence 3334678899999987654334449999999999999999999976543211111111100000
Q ss_pred --CCC---------CCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 242 --YSV---------PDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 242 --~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
... ......+.++.+++.+|+..||.+|||+ .+++.|||+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~--------~~~l~h~~~ 291 (291)
T cd07870 241 EWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISA--------QDALLHPYF 291 (291)
T ss_pred hhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCH--------HHHhcCCCC
Confidence 000 0001136789999999999999999987 555678875
No 193
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=2.1e-40 Score=276.85 Aligned_cols=251 Identities=30% Similarity=0.479 Sum_probs=208.6
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc-chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEeccC
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYAS 102 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~ 102 (298)
+|++.+.||+|++|.||.+.+..++..+++|++..... ....+.+|+.++++++|+|++++++++..+...++++++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 58999999999999999999988899999999877544 45678899999999999999999999999999999999999
Q ss_pred CCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCCCCCC
Q 022401 103 GGELFERICNA-GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV 181 (298)
Q Consensus 103 ~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~~~~~ 181 (298)
+++|.+++... ..+++..+..++.+++.++.+||+.|++|+||+|+||+++.++. ++|+|||.+.............
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~--~~l~d~~~~~~~~~~~~~~~~~ 158 (253)
T cd05122 81 GGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGE--VKLIDFGLSAQLSDTKARNTMV 158 (253)
T ss_pred CCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCe--EEEeecccccccccccccccee
Confidence 99999998776 57899999999999999999999999999999999999998877 9999999887554433234556
Q ss_pred CCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHh
Q 022401 182 GTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRI 261 (298)
Q Consensus 182 ~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 261 (298)
++..|++||.+.+...+.+ +|+||||++++++++|..||...+....... . ........+....++.++.+++.+|
T Consensus 159 ~~~~~~~PE~~~~~~~~~~-~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~i~~~ 234 (253)
T cd05122 159 GTPYWMAPEVINGKPYDYK-ADIWSLGITAIELAEGKPPYSELPPMKALFK-I--ATNGPPGLRNPEKWSDEFKDFLKKC 234 (253)
T ss_pred cCCcccCHHHHcCCCCCcc-ccHHHHHHHHHHHHhCCCCCCCCchHHHHHH-H--HhcCCCCcCcccccCHHHHHHHHHH
Confidence 7888999999877776555 9999999999999999999987543222111 1 1122222333333589999999999
Q ss_pred hhhCCCCcccccccchhhhHHHhhhhh
Q 022401 262 FVADPAAVSIFFFPLNMSCLLLFSFVW 288 (298)
Q Consensus 262 l~~dp~~Rps~~~~l~~~~~~~~~hp~ 288 (298)
|+.||.+|||+ .++++|||
T Consensus 235 l~~~p~~R~t~--------~~~l~~~~ 253 (253)
T cd05122 235 LQKNPEKRPTA--------EQLLKHPF 253 (253)
T ss_pred ccCChhhCCCH--------HHHhcCCC
Confidence 99999999988 45556776
No 194
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=7.9e-41 Score=280.96 Aligned_cols=249 Identities=24% Similarity=0.392 Sum_probs=203.4
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEec
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY 100 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~ 100 (298)
+..+|++.+.||+|++|.||++.+. ++..+++|.+.........+.+|+.++++++|||++++++++...+..++|+|+
T Consensus 2 ~~~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd05059 2 DPSELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEY 80 (256)
T ss_pred ChHHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEec
Confidence 3457999999999999999999886 456799999876655566788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCC--
Q 022401 101 ASGGELFERICNA-GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP-- 177 (298)
Q Consensus 101 ~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~-- 177 (298)
+++++|.+++... ..+++..++.++.|++.|+.+||+.|++|+||+|+||+++.++. ++|+|||++.........
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~--~kl~dfg~~~~~~~~~~~~~ 158 (256)
T cd05059 81 MANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNV--VKVSDFGLARYVLDDQYTSS 158 (256)
T ss_pred CCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCc--EEECCcccceeccccccccc
Confidence 9999999998653 46899999999999999999999999999999999999998887 999999987643221111
Q ss_pred CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHH
Q 022401 178 KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRD 256 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 256 (298)
.....+..|+|||.+.+..++.+ +|+||||+++|++++ |..||......+. ...+. .....+.+..++.++.+
T Consensus 159 ~~~~~~~~y~~Pe~~~~~~~~~~-~Di~slG~il~~l~~~g~~p~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~ 232 (256)
T cd05059 159 QGTKFPVKWAPPEVFDYSRFSSK-SDVWSFGVLMWEVFSEGKMPYERFSNSEV----VESVS-AGYRLYRPKLAPTEVYT 232 (256)
T ss_pred CCCCCCccccCHHHhccCCCCch-hhHHHHHHHHHHHhccCCCCCCCCCHHHH----HHHHH-cCCcCCCCCCCCHHHHH
Confidence 11123357999999887777665 999999999999998 7899976544222 22222 22233344457999999
Q ss_pred HHHHhhhhCCCCcccccccchh
Q 022401 257 LISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 257 li~~~l~~dp~~Rps~~~~l~~ 278 (298)
++.+||+.+|++|||+.++++.
T Consensus 233 li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 233 IMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred HHHHHhcCChhhCcCHHHHHHH
Confidence 9999999999999999888864
No 195
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.5e-40 Score=283.09 Aligned_cols=256 Identities=24% Similarity=0.376 Sum_probs=198.2
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc--chHHHHHHHHH-HhcCCCCCeeeeeEEEEeCCeEEEEEe
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK--IDENVQREIIN-HRSLRHPNIVRFKEVILTPTHLAIVME 99 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~e~~~-l~~l~h~~i~~~~~~~~~~~~~~lv~~ 99 (298)
++|++.+.||+|+||.||++++..+|+.||+|++..... ....+..|+.. ++.++|||++++++++..+...++++|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 479999999999999999999999999999999876432 22344455554 566789999999999999999999999
Q ss_pred ccCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHhhc-CcEEecCCCCceEeeCCCCCCEEEeecCccccccCC
Q 022401 100 YASGGELFERICN----AGRFSEDEARFFFQQLISGVSYCHAM-QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH 174 (298)
Q Consensus 100 ~~~~~sL~~~l~~----~~~~~~~~~~~i~~~l~~~l~~Lh~~-~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~ 174 (298)
|++ ++|.+++.. ...+++..++.++.|++.||+|||++ +++|+||+|+||+++.++. ++|+|||++......
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~--~kl~dfg~~~~~~~~ 157 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQ--VKLCDFGISGYLVDS 157 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCC--EEEeecccccccccc
Confidence 996 577776643 34689999999999999999999997 9999999999999998887 999999998654332
Q ss_pred CCCCCCCCCCcccCccccccc----cCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCC
Q 022401 175 SQPKSTVGTPAYIAPEVLLRH----EYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPI 250 (298)
Q Consensus 175 ~~~~~~~~~~~~~aPE~~~~~----~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (298)
.......++..|+|||.+.+. .++. ++|+||+|+++|+|++|..||...... ...............+ ...+
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~-~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~-~~~~ 233 (283)
T cd06617 158 VAKTIDAGCKPYMAPERINPELNQKGYDV-KSDVWSLGITMIELATGRFPYDSWKTP--FQQLKQVVEEPSPQLP-AEKF 233 (283)
T ss_pred cccccccCCccccChhhcCCcccccccCc-cccchhhHHHHHHHHhCCCCCCccccC--HHHHHHHHhcCCCCCC-cccc
Confidence 222334567889999987642 2334 499999999999999999999754321 1122222222222222 2247
Q ss_pred CHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhhh
Q 022401 251 SQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDAT 293 (298)
Q Consensus 251 ~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~~ 293 (298)
|.++.+++.+||+.+|.+||++ .++++|||+....
T Consensus 234 ~~~l~~li~~~l~~~p~~Rp~~--------~~il~~~~~~~~~ 268 (283)
T cd06617 234 SPEFQDFVNKCLKKNYKERPNY--------PELLQHPFFELHL 268 (283)
T ss_pred CHHHHHHHHHHccCChhhCcCH--------HHHhcCchhhhcc
Confidence 8999999999999999999988 5555777776543
No 196
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=1.4e-40 Score=284.52 Aligned_cols=257 Identities=27% Similarity=0.434 Sum_probs=200.1
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc--chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEe
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK--IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVME 99 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~ 99 (298)
.++|++.+.||+|++|.||++.++.+++.|++|.+..... ....+.+|+.++++++|+||+++++++.++...++|+|
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFE 83 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence 4789999999999999999999988899999999865432 22456789999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCC-C
Q 022401 100 YASGGELFERICNA-GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ-P 177 (298)
Q Consensus 100 ~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~-~ 177 (298)
|+.+ +|.+++... ..+++..++.++.|++.||.|||+.|++|+||+|+||+++.++. ++|+|||++........ .
T Consensus 84 ~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~--~kl~dfg~~~~~~~~~~~~ 160 (291)
T cd07844 84 YLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGE--LKLADFGLARAKSVPSKTY 160 (291)
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCC--EEECccccccccCCCCccc
Confidence 9975 888888654 46899999999999999999999999999999999999998887 99999998764332211 1
Q ss_pred CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcC----------------
Q 022401 178 KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQ---------------- 241 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~---------------- 241 (298)
....++..|+|||.+.+......++||||+|+++|+|++|..||..............+.....
T Consensus 161 ~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (291)
T cd07844 161 SNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKP 240 (291)
T ss_pred cccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcccccc
Confidence 2234577899999987655444559999999999999999999976553222111111111100
Q ss_pred --CCC-------CCCCCCC--HHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 242 --YSV-------PDTNPIS--QECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 242 --~~~-------~~~~~~~--~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
... .....++ .++.+++.+||+.||.+|||+ .++++|||+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~--------~e~l~~~~f 291 (291)
T cd07844 241 YSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISA--------AEAMKHPYF 291 (291)
T ss_pred ccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCH--------HHHhcCCCC
Confidence 000 0001233 788999999999999999987 455577775
No 197
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=9.2e-42 Score=287.19 Aligned_cols=244 Identities=31% Similarity=0.474 Sum_probs=195.3
Q ss_pred eEEeeeccCCeEEEEEEEEc----cCCcEEEEEEeecCCc--chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEe
Q 022401 26 DFVRDIGSGNFGVARLMRDK----VTKELVAVKYIERGDK--IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVME 99 (298)
Q Consensus 26 ~~~~~lg~g~~~~vy~~~~~----~~~~~~aiK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~ 99 (298)
.+.+.||.|.||.||.|... ..+..|+||.+..... ..+.+.+|++.+++++||||+++++++...+..++|+|
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e 81 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVME 81 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccc
Confidence 57899999999999999998 4567899999965332 35778999999999999999999999998888999999
Q ss_pred ccCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC---
Q 022401 100 YASGGELFERICNA--GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH--- 174 (298)
Q Consensus 100 ~~~~~sL~~~l~~~--~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~--- 174 (298)
|+++++|.+++... ..++...+..++.|++.||.|||+++++|++|+++||+++.++. +||+|||++......
T Consensus 82 ~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~--~Kl~~f~~~~~~~~~~~~ 159 (259)
T PF07714_consen 82 YCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQ--VKLSDFGLSRPISEKSKY 159 (259)
T ss_dssp --TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTE--EEEESTTTGEETTTSSSE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--cccccccccccccccccc
Confidence 99999999999876 67999999999999999999999999999999999999998887 999999988654211
Q ss_pred CCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHH
Q 022401 175 SQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQE 253 (298)
Q Consensus 175 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (298)
...........|+|||.+....++.+ +||||||+++||+++ |..||..... ......+ ......+.+..++..
T Consensus 160 ~~~~~~~~~~~~~aPE~~~~~~~~~k-sDVysfG~~l~ei~~~~~~p~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~ 233 (259)
T PF07714_consen 160 KNDSSQQLPLRYLAPEVLKDGEYTKK-SDVYSFGMLLYEILTLGKFPFSDYDN----EEIIEKL-KQGQRLPIPDNCPKD 233 (259)
T ss_dssp EESTTSESGGGGS-HHHHHHSEESHH-HHHHHHHHHHHHHHTTSSGTTTTSCH----HHHHHHH-HTTEETTSBTTSBHH
T ss_pred cccccccccccccccccccccccccc-cccccccccccccccccccccccccc----ccccccc-cccccceeccchhHH
Confidence 22233446678999999888777555 999999999999999 6789877643 2233333 222333445558999
Q ss_pred HHHHHHHhhhhCCCCcccccccch
Q 022401 254 CRDLISRIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 254 l~~li~~~l~~dp~~Rps~~~~l~ 277 (298)
+.+++.+||+.||.+|||+.+++.
T Consensus 234 ~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 234 IYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp HHHHHHHHT-SSGGGS--HHHHHH
T ss_pred HHHHHHHHcCCChhhCcCHHHHHh
Confidence 999999999999999999988875
No 198
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=6.8e-41 Score=286.82 Aligned_cols=258 Identities=30% Similarity=0.391 Sum_probs=204.4
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc---chHHHHHHHHHHhcCCCCCeeeeeEEEEeC--CeEE
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK---IDENVQREIINHRSLRHPNIVRFKEVILTP--THLA 95 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~ 95 (298)
+.++|++.+.||+|++|.||+|.+..+++.+++|.+..... ....+.+|+.++++++|||++++++++... ...+
T Consensus 3 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (293)
T cd07843 3 SVDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIY 82 (293)
T ss_pred chhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEE
Confidence 34689999999999999999999998899999999875432 223467899999999999999999998877 8999
Q ss_pred EEEeccCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC
Q 022401 96 IVMEYASGGELFERICNAG-RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH 174 (298)
Q Consensus 96 lv~~~~~~~sL~~~l~~~~-~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~ 174 (298)
+|+||+.+ +|.+.+.... .+++..++.++.|++.||+|||+.|++|+||+|+||+++.++. ++|+|||++......
T Consensus 83 lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~--~~l~d~g~~~~~~~~ 159 (293)
T cd07843 83 MVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGI--LKICDFGLAREYGSP 159 (293)
T ss_pred EEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCc--EEEeecCceeeccCC
Confidence 99999975 8888886544 5899999999999999999999999999999999999998887 999999988754433
Q ss_pred -CCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhc-------------
Q 022401 175 -SQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSV------------- 240 (298)
Q Consensus 175 -~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~------------- 240 (298)
.......++..|+|||.+.+......++|+||+|+++++|++|..||......+...+........
T Consensus 160 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (293)
T cd07843 160 LKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPG 239 (293)
T ss_pred ccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccch
Confidence 222334567889999998766544455999999999999999999998766544433332221100
Q ss_pred ----C--------CCCCCCCC-CCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 241 ----Q--------YSVPDTNP-ISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 241 ----~--------~~~~~~~~-~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
. .....+.. +++.+.++|.+||+.||++|||+ .++++|||+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~--------~ell~~~~f 293 (293)
T cd07843 240 AKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISA--------EDALKHPYF 293 (293)
T ss_pred hcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCH--------HHHhcCCCC
Confidence 0 00001111 47889999999999999999987 555577775
No 199
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=9.4e-41 Score=283.61 Aligned_cols=255 Identities=28% Similarity=0.450 Sum_probs=204.8
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC--CcchHHHHHHHHHHhcCC---CCCeeeeeEEEEeCCeEEEEE
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG--DKIDENVQREIINHRSLR---HPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~--~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~ 98 (298)
.|++.+.||+|++|.||++.+..+++.+++|.+... ....+.+.+|+.++++++ |||++++++++..+...++++
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 588999999999999999999889999999988653 233456788999999886 999999999999999999999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC-CC
Q 022401 99 EYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-QP 177 (298)
Q Consensus 99 ~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~-~~ 177 (298)
||+++++|.+++.. ..+++..++.++.+++.++.+||+.|++|+||+|+||+++.++. ++|+|||++....... ..
T Consensus 82 e~~~~~~L~~~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~--~~l~dfg~~~~~~~~~~~~ 158 (277)
T cd06917 82 EYAEGGSVRTLMKA-GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGN--VKLCDFGVAALLNQNSSKR 158 (277)
T ss_pred ecCCCCcHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCC--EEEccCCceeecCCCcccc
Confidence 99999999998855 47899999999999999999999999999999999999998776 9999999886443332 22
Q ss_pred CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHH
Q 022401 178 KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDL 257 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (298)
....++..|+|||.+.+......++|+||||+++|+|++|..||....... ....+.............+.++.++
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (277)
T cd06917 159 STFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFR----AMMLIPKSKPPRLEDNGYSKLLREF 234 (277)
T ss_pred ccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhh----hhhccccCCCCCCCcccCCHHHHHH
Confidence 334577889999998765544445999999999999999999997654321 1111111111111122368899999
Q ss_pred HHHhhhhCCCCcccccccchhhhHHHhhhhhhhhhh
Q 022401 258 ISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDAT 293 (298)
Q Consensus 258 i~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~~ 293 (298)
+.+||+.||.+||++.++ +.|||+....
T Consensus 235 i~~~l~~~p~~R~~~~~i--------l~~~~~~~~~ 262 (277)
T cd06917 235 VAACLDEEPKERLSAEEL--------LKSKWIKAHS 262 (277)
T ss_pred HHHHcCCCcccCcCHHHH--------hhChHhhccc
Confidence 999999999999987554 5688886544
No 200
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=4.6e-41 Score=283.95 Aligned_cols=251 Identities=26% Similarity=0.404 Sum_probs=205.6
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEE
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
++|++.+.||.|++|.||++++..+++.+++|.+.... .....+.+|+.+++.++|||++++++++..++..++++
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 57999999999999999999998899999999876422 23356788999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC
Q 022401 99 EYASGGELFERICN----AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH 174 (298)
Q Consensus 99 ~~~~~~sL~~~l~~----~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~ 174 (298)
+++.+++|.+++.. ...+++..++.++.+++.|+.|||++|++|+||+|+||+++.++. ++|+|||++......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~--~~l~dfg~~~~~~~~ 159 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGV--VKLGDLGLGRFFSSK 159 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCC--EEECcchhhhccccC
Confidence 99999999998863 345899999999999999999999999999999999999998877 999999987644332
Q ss_pred CC-CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHH
Q 022401 175 SQ-PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQE 253 (298)
Q Consensus 175 ~~-~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (298)
.. .....++..|+|||.+.+..++.+ +|+||+|+++|+|++|..||...... .....+.+.............+.+
T Consensus 160 ~~~~~~~~~~~~~~ape~~~~~~~~~~-~Dv~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 236 (267)
T cd08229 160 TTAAHSLVGTPYYMSPERIHENGYNFK-SDIWSLGCLLYEMAALQSPFYGDKMN--LYSLCKKIEQCDYPPLPSDHYSEE 236 (267)
T ss_pred CcccccccCCcCccCHHHhcCCCccch-hhHHHHHHHHHHHHhCCCCcccccch--HHHHhhhhhcCCCCCCCcccccHH
Confidence 22 223457788999999887777665 99999999999999999999764321 123333333333222223347889
Q ss_pred HHHHHHHhhhhCCCCcccccccchh
Q 022401 254 CRDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 254 l~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
+.+++.+||+.||.+|||+.+++++
T Consensus 237 ~~~li~~~l~~~p~~Rpt~~~i~~~ 261 (267)
T cd08229 237 LRQLVNMCINPDPEKRPDITYVYDV 261 (267)
T ss_pred HHHHHHHhcCCCcccCCCHHHHHHH
Confidence 9999999999999999999888753
No 201
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=5e-41 Score=285.68 Aligned_cols=250 Identities=25% Similarity=0.342 Sum_probs=204.6
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEcc-----CCcEEEEEEeecCCcc--hHHHHHHHHHHhcCCCCCeeeeeEEEEeCCe
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKV-----TKELVAVKYIERGDKI--DENVQREIINHRSLRHPNIVRFKEVILTPTH 93 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~-----~~~~~aiK~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 93 (298)
..++|.+.+.||+|++|.||++.... ++..+++|.+...... .+.+.+|++++++++|+|++++++++.....
T Consensus 3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 82 (280)
T cd05049 3 QRDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDP 82 (280)
T ss_pred ChHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCC
Confidence 34679999999999999999998743 3578999998765333 4678899999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHHhCC--------------CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCC
Q 022401 94 LAIVMEYASGGELFERICNAG--------------RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPR 159 (298)
Q Consensus 94 ~~lv~~~~~~~sL~~~l~~~~--------------~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~ 159 (298)
.++++||+++++|.+++...+ .+++..+..++.+++.++++||++|++|+||+|+||+++.++.
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~-- 160 (280)
T cd05049 83 PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLV-- 160 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCe--
Confidence 999999999999999986542 3788899999999999999999999999999999999998877
Q ss_pred EEEeecCccccccCCC---CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHH
Q 022401 160 LKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQ 235 (298)
Q Consensus 160 ~~l~d~~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~ 235 (298)
++|+|||++....... ......+++.|+|||.+.+..++.+ +||||||+++|+|++ |..||......+ ...
T Consensus 161 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~e~~~~g~~p~~~~~~~~----~~~ 235 (280)
T cd05049 161 VKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTE-SDVWSFGVVLWEIFTYGKQPWYGLSNEE----VIE 235 (280)
T ss_pred EEECCcccceecccCcceecCCCCcccceecChhhhccCCcchh-hhHHHHHHHHHHHHhcCCCCCCCCCHHH----HHH
Confidence 9999999886432221 1223334678999999988777665 999999999999998 999997765433 223
Q ss_pred HHhhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchh
Q 022401 236 RILSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
.+..+... .....++.++.+++.+||+.||.+||++.++++.
T Consensus 236 ~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 277 (280)
T cd05049 236 CITQGRLL-QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHER 277 (280)
T ss_pred HHHcCCcC-CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 33333222 2234578999999999999999999999888864
No 202
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=9.4e-41 Score=281.04 Aligned_cols=249 Identities=31% Similarity=0.427 Sum_probs=200.7
Q ss_pred eeeccCCeEEEEEEEEccCCcEEEEEEeecCCcc----hHHHHHHHHH-HhcCCCCCeeeeeEEEEeCCeEEEEEeccCC
Q 022401 29 RDIGSGNFGVARLMRDKVTKELVAVKYIERGDKI----DENVQREIIN-HRSLRHPNIVRFKEVILTPTHLAIVMEYASG 103 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~----~~~~~~e~~~-l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~~ 103 (298)
+.||+|++|.||+|.+..+++.+|+|.+.+.... ...+..|..+ ....+|+|++++++++..++.+++++||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 6799999999999999888999999998754221 1223344443 4455899999999999999999999999999
Q ss_pred CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCCCCCCCC
Q 022401 104 GELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGT 183 (298)
Q Consensus 104 ~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~ 183 (298)
++|.+++.....+++..+..++.|++.||.|||+.|++|+||+|+||+++.++. ++|+|||++..... .....++
T Consensus 82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~--~~l~dfg~~~~~~~---~~~~~~~ 156 (260)
T cd05611 82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGH--LKLTDFGLSRNGLE---NKKFVGT 156 (260)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCc--EEEeecccceeccc---cccCCCC
Confidence 999999988888999999999999999999999999999999999999998876 99999998764332 2334577
Q ss_pred CcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCC--CCCCCCHHHHHHHHHh
Q 022401 184 PAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVP--DTNPISQECRDLISRI 261 (298)
Q Consensus 184 ~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~ 261 (298)
..|++||.+.+..++.+ +|+||+|+++|++++|..||...+... ....+.......+ ....+++++.+++.+|
T Consensus 157 ~~y~~pe~~~~~~~~~~-~Dv~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 231 (260)
T cd05611 157 PDYLAPETILGVGDDKM-SDWWSLGCVIFEFLFGYPPFHAETPDA----VFDNILSRRINWPEEVKEFCSPEAVDLINRL 231 (260)
T ss_pred cCccChhhhcCCCCcch-hhhHHHHHHHHHHHHCCCCCCCCCHHH----HHHHHHhcccCCCCcccccCCHHHHHHHHHH
Confidence 88999999877765544 999999999999999999998765432 2233333332222 2234789999999999
Q ss_pred hhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 262 FVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 262 l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
|+.||++||++..+ .+++.|||+.+.
T Consensus 232 l~~~p~~R~~~~~~-----~~~l~~~~~~~~ 257 (260)
T cd05611 232 LCMDPAKRLGANGY-----QEIKSHPFFKSI 257 (260)
T ss_pred ccCCHHHccCCCcH-----HHHHcChHhhcC
Confidence 99999999987433 568899999654
No 203
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.9e-40 Score=279.34 Aligned_cols=250 Identities=32% Similarity=0.501 Sum_probs=205.5
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC---cchHHHHHHHHHHhcCCCCCeeeeeEEEEe--CCeEEEEE
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD---KIDENVQREIINHRSLRHPNIVRFKEVILT--PTHLAIVM 98 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~ 98 (298)
+|++.+.||.|++|.||++.+..++..+++|.+.... ...+.+.+|+.++++++|+|++++++++.. ....++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 5899999999999999999999899999999886532 234567789999999999999999998764 45789999
Q ss_pred eccCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHh-----hcCcEEecCCCCceEeeCCCCCCEEEeecCccc
Q 022401 99 EYASGGELFERICN----AGRFSEDEARFFFQQLISGVSYCH-----AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK 169 (298)
Q Consensus 99 ~~~~~~sL~~~l~~----~~~~~~~~~~~i~~~l~~~l~~Lh-----~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~ 169 (298)
||+++++|.+++.. ..++++..++.++.+++.||.+|| +.+++|+||+|+||+++.++. ++|+|||++.
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~--~kl~d~g~~~ 158 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNN--VKLGDFGLAK 158 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCC--EEEecccccc
Confidence 99999999998865 457899999999999999999999 899999999999999998877 9999999887
Q ss_pred cccCCCC-CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCC
Q 022401 170 SSVLHSQ-PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTN 248 (298)
Q Consensus 170 ~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (298)
....... .....++..|+|||.+.+...+.+ +|+||||+++++|++|..||...+. ....+.+...... ..+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~-~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~~~-~~~~ 232 (265)
T cd08217 159 ILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEK-SDIWSLGCLIYELCALSPPFTARNQ----LQLASKIKEGKFR-RIPY 232 (265)
T ss_pred cccCCcccccccccCCCccChhhhcCCCCCch-hHHHHHHHHHHHHHHCCCcccCcCH----HHHHHHHhcCCCC-CCcc
Confidence 5544332 234457889999999877776555 9999999999999999999987652 2233333333322 2334
Q ss_pred CCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 249 PISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 249 ~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
..+.++.+++.+||+.+|.+||++ .++++|||+
T Consensus 233 ~~~~~~~~l~~~~l~~~p~~Rp~~--------~~il~~~~~ 265 (265)
T cd08217 233 RYSSELNEVIKSMLNVDPDKRPST--------EELLQLPLI 265 (265)
T ss_pred ccCHHHHHHHHHHccCCcccCCCH--------HHHhhCCCC
Confidence 578999999999999999999988 555577875
No 204
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.3e-40 Score=282.80 Aligned_cols=259 Identities=27% Similarity=0.430 Sum_probs=205.3
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc--chHHHHHHHHHHhcCCCCCeeeeeEEEEeC--CeEEEEE
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK--IDENVQREIINHRSLRHPNIVRFKEVILTP--THLAIVM 98 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~ 98 (298)
++|+..+.||.|++|.||.+.+..+++.+++|.+..... ....+.+|++++++++||||+++++++... ..+++|+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 479999999999999999999988999999999875433 446688999999999999999999998654 4789999
Q ss_pred eccCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC
Q 022401 99 EYASGGELFERICN----AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH 174 (298)
Q Consensus 99 ~~~~~~sL~~~l~~----~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~ 174 (298)
||+++++|.+++.. ...+++..+..++.+++.+|.|||+.|++|+||+|.||+++.++. ++|+|||++......
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~--~~l~dfg~~~~~~~~ 158 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQ--VKLCDFGVSGELVNS 158 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCe--EEEeecccccccccc
Confidence 99999999887642 345889999999999999999999999999999999999998877 999999987644322
Q ss_pred CCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCc-hhHHHHHHHHhhcCC-CC----CCCC
Q 022401 175 SQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEP-KDFRKTIQRILSVQY-SV----PDTN 248 (298)
Q Consensus 175 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~-~~----~~~~ 248 (298)
.. ....++..|++||.+.+..++.+ +|+||+|+++|+|++|..||...... ....+....+..... .. ....
T Consensus 159 ~~-~~~~~~~~y~~pE~~~~~~~~~~-~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (287)
T cd06621 159 LA-GTFTGTSFYMAPERIQGKPYSIT-SDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGI 236 (287)
T ss_pred cc-ccccCCccccCHHHhcCCCCCch-hhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCC
Confidence 22 23446778999999887777666 99999999999999999999876321 111222222222111 11 1112
Q ss_pred CCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhhh
Q 022401 249 PISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDAT 293 (298)
Q Consensus 249 ~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~~ 293 (298)
.+++++.+|+.+||..||.+|||+ .+++.|||+....
T Consensus 237 ~~~~~~~~li~~~l~~~p~~Rpt~--------~eil~~~~~~~~~ 273 (287)
T cd06621 237 KWSEEFKDFIKQCLEKDPTRRPTP--------WDMLEHPWIKAQM 273 (287)
T ss_pred chHHHHHHHHHHHcCCCcccCCCH--------HHHHhCccccccc
Confidence 356889999999999999999988 5666788886443
No 205
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=1.3e-40 Score=287.33 Aligned_cols=263 Identities=28% Similarity=0.411 Sum_probs=205.1
Q ss_pred CCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcc---hHHHHHHHHHHhcCCCCCeeeeeEEEEeC--Ce
Q 022401 19 MHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKI---DENVQREIINHRSLRHPNIVRFKEVILTP--TH 93 (298)
Q Consensus 19 ~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~ 93 (298)
+...++|++.+.||.|++|.||++.+..+|+.||+|.+...... .....+|+.++++++|+|++++++++... +.
T Consensus 3 ~~~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (309)
T cd07845 3 CRSVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDS 82 (309)
T ss_pred cccccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCe
Confidence 34668999999999999999999999989999999998754322 23456899999999999999999998765 56
Q ss_pred EEEEEeccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCcccccc
Q 022401 94 LAIVMEYASGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 172 (298)
Q Consensus 94 ~~lv~~~~~~~sL~~~l~~-~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~ 172 (298)
+++|+||+.+ +|.+++.. ...+++.+++.++.|++.|+.|||+.|++|+||+|+||+++.++. ++|+|||++....
T Consensus 83 ~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~--~kL~dfg~~~~~~ 159 (309)
T cd07845 83 IFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGC--LKIADFGLARTYG 159 (309)
T ss_pred EEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCC--EEECccceeeecC
Confidence 8999999965 78877765 356899999999999999999999999999999999999998887 9999999887544
Q ss_pred CCC-CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhc-----------
Q 022401 173 LHS-QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSV----------- 240 (298)
Q Consensus 173 ~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~----------- 240 (298)
... ......++..|+|||.+.+......++|+||+|+++|+|++|..||...+..+.+..........
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (309)
T cd07845 160 LPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDL 239 (309)
T ss_pred CccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcc
Confidence 322 11223346779999998765544555999999999999999999998766544333333221100
Q ss_pred ----CCCCCC---------CCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 241 ----QYSVPD---------TNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 241 ----~~~~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
....+. ....++++.++|.+||+.||++|||+ .+++.|||+.+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~--------~~il~h~~f~~~ 296 (309)
T cd07845 240 PLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATA--------EEALESSYFKEK 296 (309)
T ss_pred cccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCH--------HHHhcChhhccC
Confidence 000000 01247889999999999999999987 455578888754
No 206
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=2.4e-40 Score=277.90 Aligned_cols=247 Identities=25% Similarity=0.380 Sum_probs=205.7
Q ss_pred CCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEe
Q 022401 20 HDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVME 99 (298)
Q Consensus 20 ~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~ 99 (298)
.+.++|++.+.||.|++|.||.+... ++.+++|.+.........+.+|+.++++++|+|++++++++.+....++|+|
T Consensus 3 ~~~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 80 (256)
T cd05039 3 INSKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTE 80 (256)
T ss_pred cChhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEE
Confidence 35678999999999999999999875 7789999998765556778899999999999999999999998899999999
Q ss_pred ccCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCC
Q 022401 100 YASGGELFERICNAG--RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP 177 (298)
Q Consensus 100 ~~~~~sL~~~l~~~~--~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~ 177 (298)
++++++|.+++.... .+++..++.++.|++.|+.|||+.|++|+||+|+||+++.++. ++|+|||.+........
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~--~~l~d~g~~~~~~~~~~- 157 (256)
T cd05039 81 YMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLV--AKVSDFGLAKEASQGQD- 157 (256)
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCC--EEEcccccccccccccc-
Confidence 999999999997665 6899999999999999999999999999999999999998887 99999998875532222
Q ss_pred CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHH
Q 022401 178 KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRD 256 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 256 (298)
.......|+|||.+....++.+ +|+||||++++++++ |..||......+ ....+.. ......+...++++.+
T Consensus 158 -~~~~~~~~~ape~~~~~~~~~~-~Di~slG~il~~l~~~g~~p~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~ 230 (256)
T cd05039 158 -SGKLPVKWTAPEALREKKFSTK-SDVWSFGILLWEIYSFGRVPYPRIPLKD----VVPHVEK-GYRMEAPEGCPPEVYK 230 (256)
T ss_pred -cCCCcccccCchhhcCCcCCcH-HHHHHHHHHHHHHHhcCCCCCCCCCHHH----HHHHHhc-CCCCCCccCCCHHHHH
Confidence 3334567999999877666555 999999999999997 999997764322 2222222 2222334457899999
Q ss_pred HHHHhhhhCCCCcccccccchh
Q 022401 257 LISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 257 li~~~l~~dp~~Rps~~~~l~~ 278 (298)
++++||+.+|.+|||+.++++.
T Consensus 231 li~~~l~~~p~~Rp~~~~l~~~ 252 (256)
T cd05039 231 VMKDCWELDPAKRPTFKQLREQ 252 (256)
T ss_pred HHHHHhccChhhCcCHHHHHHH
Confidence 9999999999999999888864
No 207
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.5e-40 Score=282.48 Aligned_cols=253 Identities=21% Similarity=0.298 Sum_probs=203.2
Q ss_pred CCCCCeeEEeeeccCCeEEEEEEEEcc-----CCcEEEEEEeecCCc--chHHHHHHHHHHhcCCCCCeeeeeEEEEeCC
Q 022401 20 HDSDRYDFVRDIGSGNFGVARLMRDKV-----TKELVAVKYIERGDK--IDENVQREIINHRSLRHPNIVRFKEVILTPT 92 (298)
Q Consensus 20 ~~~~~y~~~~~lg~g~~~~vy~~~~~~-----~~~~~aiK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 92 (298)
...++|++.+.||+|++|.||.+.+.. ++..+++|.+..... ....+.+|+.++++++|+||+++++++.+..
T Consensus 3 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (277)
T cd05036 3 VPRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERL 82 (277)
T ss_pred CCHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC
Confidence 345789999999999999999999976 678899998764432 2345788999999999999999999999888
Q ss_pred eEEEEEeccCCCCHHHHHHhCC-------CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCC-CCEEEee
Q 022401 93 HLAIVMEYASGGELFERICNAG-------RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPA-PRLKICD 164 (298)
Q Consensus 93 ~~~lv~~~~~~~sL~~~l~~~~-------~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~-~~~~l~d 164 (298)
..++++||+.+++|.+++.... .+++..+..++.|++.|++|||+++++|+||+|+||+++.++. ..++|+|
T Consensus 83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~d 162 (277)
T cd05036 83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIAD 162 (277)
T ss_pred CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEecc
Confidence 9999999999999999986543 4889999999999999999999999999999999999986552 3489999
Q ss_pred cCccccccCCCC---CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhc
Q 022401 165 FGYSKSSVLHSQ---PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSV 240 (298)
Q Consensus 165 ~~~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~ 240 (298)
||++........ .........|+|||.+.+..++.+ +||||||+++|+|++ |..||......+ ....+..
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~DiwslG~il~el~~~g~~pf~~~~~~~----~~~~~~~- 236 (277)
T cd05036 163 FGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSK-TDVWSFGVLLWEIFSLGYMPYPGRTNQE----VMEFVTG- 236 (277)
T ss_pred CccccccCCccceecCCCCCccHhhCCHHHHhcCCcCch-hHHHHHHHHHHHHHcCCCCCCCCCCHHH----HHHHHHc-
Confidence 998874422111 112223467999999987777666 999999999999997 999998755432 2222222
Q ss_pred CCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchh
Q 022401 241 QYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 241 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
......+..++.++.+++.+||+.||++|||+.+++++
T Consensus 237 ~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 237 GGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred CCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 22223344578999999999999999999999888764
No 208
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.5e-40 Score=282.40 Aligned_cols=252 Identities=18% Similarity=0.279 Sum_probs=200.5
Q ss_pred CCCCCCeeEEeeeccCCeEEEEEEEEcc-----CCcEEEEEEeecCCc--chHHHHHHHHHHhcCCCCCeeeeeEEEEeC
Q 022401 19 MHDSDRYDFVRDIGSGNFGVARLMRDKV-----TKELVAVKYIERGDK--IDENVQREIINHRSLRHPNIVRFKEVILTP 91 (298)
Q Consensus 19 ~~~~~~y~~~~~lg~g~~~~vy~~~~~~-----~~~~~aiK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 91 (298)
....++|++.+.||+|++|.||.+.+.. ++..+|+|.+..... ....+.+|+.+++.++||||+++++++...
T Consensus 2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~ 81 (277)
T cd05062 2 EVAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 81 (277)
T ss_pred cccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 3466889999999999999999998642 356799998764322 234577899999999999999999999989
Q ss_pred CeEEEEEeccCCCCHHHHHHhCC----------CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEE
Q 022401 92 THLAIVMEYASGGELFERICNAG----------RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLK 161 (298)
Q Consensus 92 ~~~~lv~~~~~~~sL~~~l~~~~----------~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~ 161 (298)
...++|+||+++++|.+++.... .++...+..++.+++.||.|||+.|++|+||+|+||+++.++. ++
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~--~~ 159 (277)
T cd05062 82 QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT--VK 159 (277)
T ss_pred CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCC--EE
Confidence 99999999999999999886532 3567788999999999999999999999999999999998877 99
Q ss_pred EeecCccccccCCC---CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHH
Q 022401 162 ICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRI 237 (298)
Q Consensus 162 l~d~~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~ 237 (298)
|+|||++....... ......++..|+|||.+.+..++.+ +||||||+++|++++ |..||....... ....+
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~~l~el~~~~~~p~~~~~~~~----~~~~~ 234 (277)
T cd05062 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTY-SDVWSFGVVLWEIATLAEQPYQGMSNEQ----VLRFV 234 (277)
T ss_pred ECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCch-hHHHHHHHHHHHHHcCCCCCCCCCCHHH----HHHHH
Confidence 99999876332211 1122344678999999887777665 999999999999998 688887655422 22222
Q ss_pred hhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchh
Q 022401 238 LSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 238 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
..... ...+...++++.+++.+||+.||++|||+.+++.+
T Consensus 235 ~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 235 MEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred HcCCc-CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 22222 12234478999999999999999999999888753
No 209
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.9e-40 Score=283.08 Aligned_cols=257 Identities=28% Similarity=0.455 Sum_probs=213.0
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEec
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY 100 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~ 100 (298)
..+.|++.+.||+|++|.||.+.+..++..+++|++.......+.+.+|+..+++++|+|++++++++......++++||
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 96 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEY 96 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEec
Confidence 45679999999999999999999988899999999987655567788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC-CCC
Q 022401 101 ASGGELFERICNAG-RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-QPK 178 (298)
Q Consensus 101 ~~~~sL~~~l~~~~-~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~-~~~ 178 (298)
+++++|.+++.... .++...+..++.+++.+|.+||+.|++|+||+|+||+++.++. ++|+||+++....... ...
T Consensus 97 ~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~--~~l~d~~~~~~~~~~~~~~~ 174 (286)
T cd06614 97 MDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGS--VKLADFGFAAQLTKEKSKRN 174 (286)
T ss_pred cCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCC--EEECccchhhhhccchhhhc
Confidence 99999999998876 8999999999999999999999999999999999999998887 9999999875433222 112
Q ss_pred CCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHH
Q 022401 179 STVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLI 258 (298)
Q Consensus 179 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (298)
...++..|++||.+.+..++.+ +|+||||+++|++++|..||...+....... ..............++.++.+++
T Consensus 175 ~~~~~~~y~~PE~~~~~~~~~~-~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~li 250 (286)
T cd06614 175 SVVGTPYWMAPEVIKRKDYGPK-VDIWSLGIMCIEMAEGEPPYLREPPLRALFL---ITTKGIPPLKNPEKWSPEFKDFL 250 (286)
T ss_pred cccCCcccCCHhHhcCCCCCCc-cccHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHhcCCCCCcchhhCCHHHHHHH
Confidence 3346778999999877776655 9999999999999999999986544222211 11122222333344789999999
Q ss_pred HHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 259 SRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 259 ~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
.+||+.+|.+|||+ .++++|||+..
T Consensus 251 ~~~l~~~p~~Rpt~--------~~il~~~~~~~ 275 (286)
T cd06614 251 NKCLVKDPEKRPSA--------EELLQHPFLKK 275 (286)
T ss_pred HHHhccChhhCcCH--------HHHhhChHhhc
Confidence 99999999999987 55557888775
No 210
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1.3e-40 Score=313.03 Aligned_cols=253 Identities=27% Similarity=0.357 Sum_probs=203.2
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEE
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
++|++.+.||+|+||.||++.+..+++.||+|++.... ....++.+|+.++++++|||++++++++.+++..+++|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 68999999999999999999999899999999986532 22356788999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHhC-----------CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCc
Q 022401 99 EYASGGELFERICNA-----------GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGY 167 (298)
Q Consensus 99 ~~~~~~sL~~~l~~~-----------~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~ 167 (298)
||++|++|.+++... ...+...++.++.|++.||+|||+.|++||||||+||+++.++. ++|+|||+
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~--vKLiDFGL 159 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGE--VVILDWGA 159 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCC--EEEEecCc
Confidence 999999999988532 23456778899999999999999999999999999999998887 99999999
Q ss_pred cccccCC-------------------CCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCch
Q 022401 168 SKSSVLH-------------------SQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPK 228 (298)
Q Consensus 168 ~~~~~~~-------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~ 228 (298)
+...... .......|++.|+|||.+.+..++.+ +||||+||++|+|++|..||.......
T Consensus 160 Ak~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~k-SDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 160 AIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASES-TDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred ceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcH-hHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 8644111 01112357899999999887777655 999999999999999999997744322
Q ss_pred hHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhH
Q 022401 229 DFRKTIQRILSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCL 281 (298)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~ 281 (298)
. .................+|+.+.+++.+||+.||++|++..+.+.....
T Consensus 239 i---~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le 288 (932)
T PRK13184 239 I---SYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLE 288 (932)
T ss_pred h---hhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 1 1111111122222234578999999999999999999988776654433
No 211
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=8.6e-41 Score=281.48 Aligned_cols=250 Identities=32% Similarity=0.494 Sum_probs=207.7
Q ss_pred eccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEeccCCCCH
Q 022401 31 IGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 106 (298)
Q Consensus 31 lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~~~sL 106 (298)
||.|++|.||.+++..+++.+++|.+.... .....+.+|+.++++++|||++++++.+..+...+++++++.+++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999999889999999986543 2345678899999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC---------CC
Q 022401 107 FERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS---------QP 177 (298)
Q Consensus 107 ~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~---------~~ 177 (298)
.+++.....+++..++.++.|++.||++||+.|++|+||+|+||+++.++. ++|+|||++....... ..
T Consensus 81 ~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~--~~l~dfg~~~~~~~~~~~~~~~~~~~~ 158 (265)
T cd05579 81 ASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGH--LKLTDFGLSKVGLVRRQINLNDDEKED 158 (265)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCC--EEEEecccchhcccCcccccccccccc
Confidence 999988778999999999999999999999999999999999999998887 9999999876443321 11
Q ss_pred CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHH
Q 022401 178 KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDL 257 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (298)
....+...|++||.......+.+ +|+||||++++++++|..||..... ......+.......+....++.++.++
T Consensus 159 ~~~~~~~~~~~Pe~~~~~~~~~~-~Dv~slG~~~~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (265)
T cd05579 159 KRIVGTPDYIAPEVILGQGHSKT-VDWWSLGCILYEFLVGIPPFHGETP----EEIFQNILNGKIEWPEDVEVSDEAIDL 233 (265)
T ss_pred cCcccCccccCHHHhcCCCCCcc-hhhHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHhcCCcCCCccccCCHHHHHH
Confidence 23346778999999877776555 9999999999999999999987653 233334444444444444468999999
Q ss_pred HHHhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 258 ISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 258 i~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
+.+||+.+|.+|||+..+ .++++|||+.+.
T Consensus 234 i~~~l~~~p~~Rpt~~~~-----~~~l~~~~~~~~ 263 (265)
T cd05579 234 ISKLLVPDPEKRLGAKSI-----EEIKNHPFFKGI 263 (265)
T ss_pred HHHHhcCCHhhcCCCccH-----HHHhcCccccCC
Confidence 999999999999998333 467789999743
No 212
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.1e-40 Score=288.79 Aligned_cols=252 Identities=24% Similarity=0.343 Sum_probs=187.2
Q ss_pred EeeeccCCeEEEEEEEEc--cCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCeeeeeEEEEe--CCeEEEEEeccCC
Q 022401 28 VRDIGSGNFGVARLMRDK--VTKELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILT--PTHLAIVMEYASG 103 (298)
Q Consensus 28 ~~~lg~g~~~~vy~~~~~--~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~~~~~~ 103 (298)
+++||+|+||.||+|++. .+++.+|+|.+.... ....+.+|+.++++++||||+++++++.. +..++++++++.+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH 84 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC-CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCC
Confidence 468999999999999975 367889999886543 34567889999999999999999999864 4578999999854
Q ss_pred CCHHHHHHhC---------CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCC--CCCCEEEeecCcccccc
Q 022401 104 GELFERICNA---------GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGS--PAPRLKICDFGYSKSSV 172 (298)
Q Consensus 104 ~sL~~~l~~~---------~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~--~~~~~~l~d~~~~~~~~ 172 (298)
+|.+++... ..+++..++.++.|++.||+|||+.|++|+||||+||+++.+ ....+||+|||++....
T Consensus 85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~ 163 (317)
T cd07868 85 -DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN 163 (317)
T ss_pred -CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccC
Confidence 777776422 248899999999999999999999999999999999999432 22349999999986543
Q ss_pred CCC----CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCc---------hhHHHHHHHHh-
Q 022401 173 LHS----QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEP---------KDFRKTIQRIL- 238 (298)
Q Consensus 173 ~~~----~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~---------~~~~~~~~~~~- 238 (298)
... ......+++.|+|||.+.+....+.++||||+||++|+|++|..||...... +.+........
T Consensus 164 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (317)
T cd07868 164 SPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGF 243 (317)
T ss_pred CCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCC
Confidence 222 1223457889999999887655455599999999999999999999754421 11111110000
Q ss_pred -----------------------hcCCCC--------CCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhh
Q 022401 239 -----------------------SVQYSV--------PDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFV 287 (298)
Q Consensus 239 -----------------------~~~~~~--------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp 287 (298)
...... ......+.++.+||.+||+.||.+|||+ .++++||
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~--------~e~l~hp 315 (317)
T cd07868 244 PADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITS--------EQAMQDP 315 (317)
T ss_pred CChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCH--------HHHhcCC
Confidence 000000 0001235678999999999999999988 5555788
Q ss_pred hh
Q 022401 288 WM 289 (298)
Q Consensus 288 ~~ 289 (298)
|+
T Consensus 316 ~f 317 (317)
T cd07868 316 YF 317 (317)
T ss_pred CC
Confidence 85
No 213
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-44 Score=291.03 Aligned_cols=254 Identities=25% Similarity=0.417 Sum_probs=218.7
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEeccCC
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASG 103 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~~ 103 (298)
-|.++++||+|++|.||+|.++.+|..+|||.+..+.. .+++.+|+.++++.+.|++++.+|.+.....+++|||||..
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sD-LQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA 112 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTD-LQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA 112 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccch-HHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence 48999999999999999999999999999999887653 46778999999999999999999999999999999999999
Q ss_pred CCHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccc-cCCCCCCCCC
Q 022401 104 GELFERIC-NAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSS-VLHSQPKSTV 181 (298)
Q Consensus 104 ~sL~~~l~-~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~-~~~~~~~~~~ 181 (298)
||..+.+. .+.++++.++..+++..++||+|||...-+|||||..||+++.+|+ .||.|||.+... ..-.......
T Consensus 113 GSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~--AKLADFGVAGQLTDTMAKRNTVI 190 (502)
T KOG0574|consen 113 GSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGI--AKLADFGVAGQLTDTMAKRNTVI 190 (502)
T ss_pred CcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccch--hhhhhccccchhhhhHHhhCccc
Confidence 99999885 4567999999999999999999999999999999999999999998 899999987522 2223345667
Q ss_pred CCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHh
Q 022401 182 GTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRI 261 (298)
Q Consensus 182 ~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 261 (298)
|++.|||||++..-+|++. +||||||+...||..|.+||..... .+....-....++.+..+..+++++.+||++|
T Consensus 191 GTPFWMAPEVI~EIGY~~~-ADIWSLGITaIEMAEG~PPYsDIHP---MRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~C 266 (502)
T KOG0574|consen 191 GTPFWMAPEVIEEIGYDTK-ADIWSLGITAIEMAEGRPPYSDIHP---MRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSC 266 (502)
T ss_pred cCcccccHHHHHHhccchh-hhHhhhcchhhhhhcCCCCcccccc---cceeEeccCCCCCCCCChHhhhhHHHHHHHHH
Confidence 9999999999999999998 9999999999999999999987442 11212122334444555566889999999999
Q ss_pred hhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 262 FVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 262 l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
|-++|++|.|+ .++++|||+.+.
T Consensus 267 LiK~PE~R~TA--------~~L~~H~FiknA 289 (502)
T KOG0574|consen 267 LIKKPEERKTA--------LRLCEHTFIKNA 289 (502)
T ss_pred hcCCHHHHHHH--------HHHhhhhhhcCC
Confidence 99999999998 888899998754
No 214
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=2.4e-40 Score=283.59 Aligned_cols=257 Identities=28% Similarity=0.342 Sum_probs=200.2
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc---chHHHHHHHHHHhcCC-CCCeeeeeEEEEeCCe-----
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK---IDENVQREIINHRSLR-HPNIVRFKEVILTPTH----- 93 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~---~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~----- 93 (298)
++|++.+.||+|++|.||++.+..+++.|++|.+..... ....+.+|+.+++++. |||++++++++.....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 479999999999999999999998999999998765432 2356788999999995 6999999999887655
Q ss_pred EEEEEeccCCCCHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeC-CCCCCEEEeecCc
Q 022401 94 LAIVMEYASGGELFERICNA-----GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDG-SPAPRLKICDFGY 167 (298)
Q Consensus 94 ~~lv~~~~~~~sL~~~l~~~-----~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~-~~~~~~~l~d~~~ 167 (298)
.++++||+++ +|.+++... ..+++..++.++.|++.||.|||+.|++|+||+|+||+++. ++. ++|+|||+
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~--~kl~dfg~ 157 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGL--LKIADLGL 157 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCe--EEEeeccc
Confidence 8999999986 787777532 35799999999999999999999999999999999999987 555 99999998
Q ss_pred cccccCC-CCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCC-C--
Q 022401 168 SKSSVLH-SQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQY-S-- 243 (298)
Q Consensus 168 ~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~-- 243 (298)
+...... .......+++.|+|||.+.+......++|+||||+++|+|++|..||...+......+....+..... .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (295)
T cd07837 158 GRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWP 237 (295)
T ss_pred ceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCc
Confidence 7643322 22223346778999998866544445599999999999999999999876654444333322111000 0
Q ss_pred ----------C---------CCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhh
Q 022401 244 ----------V---------PDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMF 290 (298)
Q Consensus 244 ----------~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~ 290 (298)
. .....+++++.+||.+||..||.+||++ .+++.|||+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~--------~eil~~~~~~ 295 (295)
T cd07837 238 GVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISA--------KAALTHPYFD 295 (295)
T ss_pred chhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCH--------HHHhcCCCcC
Confidence 0 0012468899999999999999999987 5666788873
No 215
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=3.5e-40 Score=278.38 Aligned_cols=252 Identities=27% Similarity=0.431 Sum_probs=206.2
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC----CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEE
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG----DKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
++|++.+.||+|++|.||++....+++.+++|.+... ....+.+.+|+.++++++|+|++++++++...+..++++
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 6899999999999999999999989999999987632 223456889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC
Q 022401 99 EYASGGELFERICN----AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH 174 (298)
Q Consensus 99 ~~~~~~sL~~~l~~----~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~ 174 (298)
||+++++|..++.. ...++...++.++.+++.|+.+||+.|++|+||+|+||+++.++. ++|+|||++......
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~--~~l~d~~~~~~~~~~ 159 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGV--VKLGDLGLGRFFSSK 159 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCc--EEEeccceeeeccCC
Confidence 99999999988854 345889999999999999999999999999999999999998887 999999987643332
Q ss_pred C-CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHH
Q 022401 175 S-QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQE 253 (298)
Q Consensus 175 ~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (298)
. ......++..|.|||.+.+..++.+ +|+||+|+++|++++|..||..... ........+.............+.+
T Consensus 160 ~~~~~~~~~~~~y~apE~~~~~~~~~~-~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (267)
T cd08224 160 TTAAHSLVGTPYYMSPERIHENGYNFK-SDIWSLGCLLYEMAALQSPFYGDKM--NLYSLCKKIEKCDYPPLPADHYSEE 236 (267)
T ss_pred CcccceecCCccccCHHHhccCCCCch-hcHHHHHHHHHHHHHCCCCcccCCc--cHHHHHhhhhcCCCCCCChhhcCHH
Confidence 2 2233457788999999887777665 9999999999999999999865432 2223333333322221112247889
Q ss_pred HHHHHHHhhhhCCCCcccccccchhh
Q 022401 254 CRDLISRIFVADPAAVSIFFFPLNMS 279 (298)
Q Consensus 254 l~~li~~~l~~dp~~Rps~~~~l~~~ 279 (298)
+.++|.+||+.+|.+|||+.+++++.
T Consensus 237 ~~~~i~~cl~~~p~~Rp~~~~il~~~ 262 (267)
T cd08224 237 LRDLVSRCINPDPEKRPDISYVLQVA 262 (267)
T ss_pred HHHHHHHHcCCCcccCCCHHHHHHHH
Confidence 99999999999999999998888643
No 216
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-41 Score=298.39 Aligned_cols=261 Identities=25% Similarity=0.353 Sum_probs=224.8
Q ss_pred CCCCcCCCCCCCCCeeEEeeeccCCeEEEEEEEEccCCc---E-EEEEEeecC----CcchHHHHHHHHHHhcCCCCCee
Q 022401 11 GPAMDMPIMHDSDRYDFVRDIGSGNFGVARLMRDKVTKE---L-VAVKYIERG----DKIDENVQREIINHRSLRHPNIV 82 (298)
Q Consensus 11 ~~~~~~~~~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~---~-~aiK~~~~~----~~~~~~~~~e~~~l~~l~h~~i~ 82 (298)
.|..+-++.+.-++..+.++||+|+||.||.++.+..+. . ||+|....+ ......+.+|.++++.++||||+
T Consensus 145 ~PI~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVV 224 (474)
T KOG0194|consen 145 RPIPRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVV 224 (474)
T ss_pred ccccccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEE
Confidence 577777888888999999999999999999999875422 3 899988742 33446688999999999999999
Q ss_pred eeeEEEEeCCeEEEEEeccCCCCHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEE
Q 022401 83 RFKEVILTPTHLAIVMEYASGGELFERICNAGR-FSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLK 161 (298)
Q Consensus 83 ~~~~~~~~~~~~~lv~~~~~~~sL~~~l~~~~~-~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~ 161 (298)
+++|++.++..+++|+|+|+||+|.++|...+. ++..+...++.+.+.||+|||+.+++||||-..|+|++.++. +|
T Consensus 225 r~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~--vK 302 (474)
T KOG0194|consen 225 RFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGV--VK 302 (474)
T ss_pred EEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCe--EE
Confidence 999999999999999999999999999988874 999999999999999999999999999999999999998886 89
Q ss_pred EeecCccccccCCCCCC-CCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhh
Q 022401 162 ICDFGYSKSSVLHSQPK-STVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILS 239 (298)
Q Consensus 162 l~d~~~~~~~~~~~~~~-~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~ 239 (298)
++|||+++......... .......|+|||.+....++.+ +||||||+++||+++ |..||.+... .....++..
T Consensus 303 ISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~k-TDV~sfGV~~~Eif~~g~~Py~g~~~----~~v~~kI~~ 377 (474)
T KOG0194|consen 303 ISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFK-TDVWSFGVLLWEIFENGAEPYPGMKN----YEVKAKIVK 377 (474)
T ss_pred eCccccccCCcceeeccccccCcceecChhhhccCccccc-cchhheeeeEEeeeccCCCCCCCCCH----HHHHHHHHh
Confidence 99999988665333333 3346688999999998888777 999999999999998 7889988664 455666656
Q ss_pred cCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchh
Q 022401 240 VQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 240 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
...+.+.+...|.++..++.+||..||++|||+.++.+.
T Consensus 378 ~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~ 416 (474)
T KOG0194|consen 378 NGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKK 416 (474)
T ss_pred cCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHH
Confidence 677777777789999999999999999999999888753
No 217
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=1e-40 Score=283.50 Aligned_cols=254 Identities=31% Similarity=0.491 Sum_probs=211.3
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC----CcchHHHHHHHHHHhcCC-CCCeeeeeEEEEeCCeEEEE
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG----DKIDENVQREIINHRSLR-HPNIVRFKEVILTPTHLAIV 97 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~----~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 97 (298)
++|++.+.||+|++|.||++....++..+++|++... ......+.+|..+++++. ||||+++++++..++..+++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 4799999999999999999999989999999998753 223356778999999998 99999999999999999999
Q ss_pred EeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCC-
Q 022401 98 MEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ- 176 (298)
Q Consensus 98 ~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~- 176 (298)
++++.+++|.+.+...+.++...++.++.|++.|+.+||+.|++|+||+|+||+++.++. ++|+|||++........
T Consensus 81 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~--~~l~df~~~~~~~~~~~~ 158 (280)
T cd05581 81 LEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMH--IKITDFGTAKVLDPNSSP 158 (280)
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCC--EEecCCccccccCCcccc
Confidence 999999999999988888999999999999999999999999999999999999998887 99999998764332221
Q ss_pred --------------------CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHH
Q 022401 177 --------------------PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQR 236 (298)
Q Consensus 177 --------------------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~ 236 (298)
.....++..|+|||.......+.+ +|+||||++++++++|..||........ .+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~-~Di~slG~~l~~l~~g~~p~~~~~~~~~----~~~ 233 (280)
T cd05581 159 ESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKS-SDLWALGCIIYQMLTGKPPFRGSNEYLT----FQK 233 (280)
T ss_pred ccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChh-hhHHHHHHHHHHHHhCCCCCCCccHHHH----HHH
Confidence 112235678999998877665554 9999999999999999999998764222 233
Q ss_pred HhhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 237 ILSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
+...... .+..+++.+.+++.+||+.||.+|||+.+ ...++++|||+
T Consensus 234 ~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~R~~~~~----~~~~ll~~~~~ 280 (280)
T cd05581 234 ILKLEYS--FPPNFPPDAKDLIEKLLVLDPQDRLGVNE----GYDELKAHPFF 280 (280)
T ss_pred HHhcCCC--CCCccCHHHHHHHHHHhcCCHhhCCCccc----CHHHHhcCCCC
Confidence 3333333 33447899999999999999999999855 33677889986
No 218
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.9e-40 Score=284.63 Aligned_cols=249 Identities=24% Similarity=0.326 Sum_probs=199.5
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCc--EEEEEEeecC--CcchHHHHHHHHHHhcC-CCCCeeeeeEEEEeCCeEEEE
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKE--LVAVKYIERG--DKIDENVQREIINHRSL-RHPNIVRFKEVILTPTHLAIV 97 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~--~~aiK~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 97 (298)
++|++.+.||+|+||.||++..+.++. .+++|.+... ....+.+.+|+.++.++ +||||+++++++.....++++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 579999999999999999999876654 4678876632 22335678899999999 799999999999998999999
Q ss_pred EeccCCCCHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEE
Q 022401 98 MEYASGGELFERICNAG----------------RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLK 161 (298)
Q Consensus 98 ~~~~~~~sL~~~l~~~~----------------~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~ 161 (298)
+||+++++|.+++.... .++...+..++.|++.||+|||++|++|+||+|+||+++.++. ++
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~--~k 159 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLA--SK 159 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCe--EE
Confidence 99999999999986532 4788899999999999999999999999999999999988776 99
Q ss_pred EeecCccccccCCCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhc
Q 022401 162 ICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSV 240 (298)
Q Consensus 162 l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~ 240 (298)
|+|||++..............+..|+|||...+..++.+ +||||||+++|+|++ |..||......+ ....+..
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~DvwSlG~il~el~t~g~~pf~~~~~~~----~~~~~~~- 233 (297)
T cd05089 160 IADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTK-SDVWSFGVLLWEIVSLGGTPYCGMTCAE----LYEKLPQ- 233 (297)
T ss_pred ECCcCCCccccceeccCCCCcCccccCchhhccCCCCch-hhHHHHHHHHHHHHcCCCCCCCCCCHHH----HHHHHhc-
Confidence 999998763322222222233457999999877776655 999999999999997 999997755422 2222222
Q ss_pred CCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhh
Q 022401 241 QYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMS 279 (298)
Q Consensus 241 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~ 279 (298)
......+..++.++.+++.+||+.||.+|||+.+++.+.
T Consensus 234 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l 272 (297)
T cd05089 234 GYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQL 272 (297)
T ss_pred CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 222233445789999999999999999999999998654
No 219
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=6.1e-40 Score=276.81 Aligned_cols=251 Identities=30% Similarity=0.468 Sum_probs=205.2
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC------CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeC--CeE
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG------DKIDENVQREIINHRSLRHPNIVRFKEVILTP--THL 94 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~ 94 (298)
.+|++.+.||+|++|.||.+.+..++..+++|.+... ......+.+|+.++++++|+||+++++++.+. ..+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4799999999999999999999989999999987542 12234678899999999999999999998764 468
Q ss_pred EEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC
Q 022401 95 AIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH 174 (298)
Q Consensus 95 ~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~ 174 (298)
++++|++++++|.+.+.....+++..++.++.+++.|+.+||+.|++|+||+|+||+++.++. ++|+|||++......
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~--~~l~dfg~~~~~~~~ 159 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGN--VKLGDFGASKRIQTI 159 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCC--EEECccccccccccc
Confidence 899999999999999988778999999999999999999999999999999999999998876 999999988644321
Q ss_pred C----CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCC
Q 022401 175 S----QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPI 250 (298)
Q Consensus 175 ~----~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (298)
. ......++..|+|||.+.+..++.+ +|+||||++++++++|..||....... ...+..........+..+
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~~~~~~~p~~~ 234 (264)
T cd06653 160 CMSGTGIKSVTGTPYWMSPEVISGEGYGRK-ADVWSVACTVVEMLTEKPPWAEYEAMA----AIFKIATQPTKPMLPDGV 234 (264)
T ss_pred cccCccccccCCcccccCHhhhcCCCCCcc-ccHHHHHHHHHHHHhCCCCCCccCHHH----HHHHHHcCCCCCCCCccc
Confidence 1 1122346788999999887776555 999999999999999999998754322 222333333333344558
Q ss_pred CHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 251 SQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 251 ~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
++++.+++.+||+ +|..||++ ..+++|||+
T Consensus 235 ~~~~~~~i~~~l~-~~~~r~~~--------~~~~~~~~~ 264 (264)
T cd06653 235 SDACRDFLKQIFV-EEKRRPTA--------EFLLRHPFV 264 (264)
T ss_pred CHHHHHHHHHHhc-CcccCccH--------HHHhcCCCC
Confidence 8999999999998 68999987 566678874
No 220
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=2.2e-40 Score=281.47 Aligned_cols=253 Identities=27% Similarity=0.434 Sum_probs=205.5
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC--cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEec
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD--KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY 100 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~ 100 (298)
+.|+..+.||.|++|.||.+.+..++..+|+|.+.... .....+.+|+.+++++.|||++++++++.++..+++|+||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 46889999999999999999998889999999887543 2345678899999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC-CCCC
Q 022401 101 ASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-QPKS 179 (298)
Q Consensus 101 ~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~-~~~~ 179 (298)
+++++|.+++.. .++++.++..++.+++.|+++||+.+++|+||+|+||+++.++. ++|+|||++....... ....
T Consensus 84 ~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~--~~l~dfg~~~~~~~~~~~~~~ 160 (277)
T cd06640 84 LGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGD--VKLADFGVAGQLTDTQIKRNT 160 (277)
T ss_pred CCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCC--EEEcccccceeccCCcccccc
Confidence 999999998864 56899999999999999999999999999999999999998877 9999999886443322 1223
Q ss_pred CCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHH
Q 022401 180 TVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLIS 259 (298)
Q Consensus 180 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (298)
..++..|+|||.+.+..++.+ +|+||||+++|+|++|..||........ ...+.... ........+..+.+++.
T Consensus 161 ~~~~~~y~apE~~~~~~~~~~-~Dv~slG~il~el~tg~~p~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~li~ 234 (277)
T cd06640 161 FVGTPFWMAPEVIQQSAYDSK-ADIWSLGITAIELAKGEPPNSDMHPMRV----LFLIPKNN-PPTLTGEFSKPFKEFID 234 (277)
T ss_pred ccCcccccCHhHhccCCCccH-HHHHHHHHHHHHHHHCCCCCCCcChHhH----hhhhhcCC-CCCCchhhhHHHHHHHH
Confidence 346778999999887777655 9999999999999999999986543211 11111111 11222346789999999
Q ss_pred HhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 260 RIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 260 ~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
+||+.+|.+||++ .+++.|||+...
T Consensus 235 ~~l~~~p~~Rp~~--------~~il~~~~~~~~ 259 (277)
T cd06640 235 ACLNKDPSFRPTA--------KELLKHKFIVKN 259 (277)
T ss_pred HHcccCcccCcCH--------HHHHhChHhhhc
Confidence 9999999999988 555577777643
No 221
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=2.6e-40 Score=282.60 Aligned_cols=264 Identities=19% Similarity=0.277 Sum_probs=207.3
Q ss_pred CCCCCCeeEEeeeccCCeEEEEEEEEcc-----CCcEEEEEEeecCCc--chHHHHHHHHHHhcCCCCCeeeeeEEEEeC
Q 022401 19 MHDSDRYDFVRDIGSGNFGVARLMRDKV-----TKELVAVKYIERGDK--IDENVQREIINHRSLRHPNIVRFKEVILTP 91 (298)
Q Consensus 19 ~~~~~~y~~~~~lg~g~~~~vy~~~~~~-----~~~~~aiK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 91 (298)
....++|++.+.||+|+||.||++..+. .+..+|+|.+..... ....+.+|+.++++++|||++++++++.+.
T Consensus 2 ~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (288)
T cd05061 2 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG 81 (288)
T ss_pred cccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 3456899999999999999999987642 355799998764432 224567899999999999999999999988
Q ss_pred CeEEEEEeccCCCCHHHHHHhC----------CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEE
Q 022401 92 THLAIVMEYASGGELFERICNA----------GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLK 161 (298)
Q Consensus 92 ~~~~lv~~~~~~~sL~~~l~~~----------~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~ 161 (298)
...++++||+++++|.+++... ...+...+..++.+++.||.|||+++++|+||+|+||+++.++. ++
T Consensus 82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~--~~ 159 (288)
T cd05061 82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFT--VK 159 (288)
T ss_pred CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCc--EE
Confidence 9999999999999999999642 23466788999999999999999999999999999999998876 99
Q ss_pred EeecCccccccCCC---CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHH
Q 022401 162 ICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRI 237 (298)
Q Consensus 162 l~d~~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~ 237 (298)
|+|||++....... ......++..|+|||.+.+..++.+ +|+||||+++|++++ |..||......+ ....+
T Consensus 160 L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~-~DvwslG~~l~el~~~~~~p~~~~~~~~----~~~~~ 234 (288)
T cd05061 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTS-SDMWSFGVVLWEITSLAEQPYQGLSNEQ----VLKFV 234 (288)
T ss_pred ECcCCccccccccccccccCCCcccccccCHHHhccCCCChH-hHHHHHHHHHHHHHhCCCCCCCCCCHHH----HHHHH
Confidence 99999876432211 1122234567999999887777665 999999999999998 788987755422 22222
Q ss_pred hhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 238 LSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 238 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
.... ....+...++++.+++.+||+.||.+|||+.++++ .+.-..|||+.+.
T Consensus 235 ~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~--~l~~~~~~~~~~~ 286 (288)
T cd05061 235 MDGG-YLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVN--LLKDDLHPSFPEV 286 (288)
T ss_pred HcCC-CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHH--HHHhhcCCCCCCC
Confidence 2222 12223346899999999999999999999999884 3444469988764
No 222
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.1e-40 Score=290.95 Aligned_cols=256 Identities=21% Similarity=0.342 Sum_probs=202.5
Q ss_pred CCCCCCeeEEeeeccCCeEEEEEEEEcc-----CCcEEEEEEeecCCc--chHHHHHHHHHHhcC-CCCCeeeeeEEEEe
Q 022401 19 MHDSDRYDFVRDIGSGNFGVARLMRDKV-----TKELVAVKYIERGDK--IDENVQREIINHRSL-RHPNIVRFKEVILT 90 (298)
Q Consensus 19 ~~~~~~y~~~~~lg~g~~~~vy~~~~~~-----~~~~~aiK~~~~~~~--~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~ 90 (298)
.+..++|++.+.||+|+||.||.|.... +++.||+|++..... ..+.+.+|+.++.++ +|+||+++++++..
T Consensus 3 ~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~ 82 (337)
T cd05054 3 EFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTK 82 (337)
T ss_pred ccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEec
Confidence 4455799999999999999999997543 457899998875332 234567899999999 79999999998865
Q ss_pred C-CeEEEEEeccCCCCHHHHHHhC--------------------------------------------------------
Q 022401 91 P-THLAIVMEYASGGELFERICNA-------------------------------------------------------- 113 (298)
Q Consensus 91 ~-~~~~lv~~~~~~~sL~~~l~~~-------------------------------------------------------- 113 (298)
. ..++++++|+++++|.+.+...
T Consensus 83 ~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (337)
T cd05054 83 PGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEG 162 (337)
T ss_pred CCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhh
Confidence 4 5788999999999999888532
Q ss_pred -----CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC---CCCCCCCCCc
Q 022401 114 -----GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS---QPKSTVGTPA 185 (298)
Q Consensus 114 -----~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~ 185 (298)
.+++...+..++.|++.||.|||++|++||||||+||+++.++. ++|+|||++....... ......++..
T Consensus 163 ~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~--vkL~DfG~a~~~~~~~~~~~~~~~~~~~~ 240 (337)
T cd05054 163 DELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNV--VKICDFGLARDIYKDPDYVRKGDARLPLK 240 (337)
T ss_pred hHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCc--EEEeccccchhcccCcchhhccCCCCCcc
Confidence 25788899999999999999999999999999999999998776 9999999987442221 1122344567
Q ss_pred ccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhhhh
Q 022401 186 YIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIFVA 264 (298)
Q Consensus 186 ~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~ 264 (298)
|+|||++.+..++.+ +|||||||++|+|++ |..||......+.+...... ......+...++++.+++.+||+.
T Consensus 241 y~aPE~~~~~~~~~~-~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~cl~~ 315 (337)
T cd05054 241 WMAPESIFDKVYTTQ-SDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKE----GTRMRAPEYATPEIYSIMLDCWHN 315 (337)
T ss_pred ccCcHHhcCCCCCcc-ccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhc----cCCCCCCccCCHHHHHHHHHHccC
Confidence 999999988888776 999999999999998 99999775443333322221 122223344789999999999999
Q ss_pred CCCCcccccccchhhhH
Q 022401 265 DPAAVSIFFFPLNMSCL 281 (298)
Q Consensus 265 dp~~Rps~~~~l~~~~~ 281 (298)
+|++||++.+++++...
T Consensus 316 ~p~~RPs~~ell~~l~~ 332 (337)
T cd05054 316 NPEDRPTFSELVEILGD 332 (337)
T ss_pred ChhhCcCHHHHHHHHHH
Confidence 99999999999876543
No 223
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3.2e-40 Score=281.27 Aligned_cols=250 Identities=20% Similarity=0.311 Sum_probs=200.1
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEc----cCCcEEEEEEeecCCc--chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeE
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDK----VTKELVAVKYIERGDK--IDENVQREIINHRSLRHPNIVRFKEVILTPTHL 94 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~----~~~~~~aiK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 94 (298)
+.++|++.+.||+|+||.||++... .++..+++|.+..... ....+.+|+.++++++|||++++++++......
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 82 (283)
T cd05090 3 PLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPV 82 (283)
T ss_pred ChhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCce
Confidence 4478999999999999999999853 4567899998874332 224678899999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHHhC-----------------CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCC
Q 022401 95 AIVMEYASGGELFERICNA-----------------GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPA 157 (298)
Q Consensus 95 ~lv~~~~~~~sL~~~l~~~-----------------~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~ 157 (298)
++++||+++++|.+++... ..++...+..++.+++.|+.|||++|++|+||+|+||+++.++.
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~ 162 (283)
T cd05090 83 CMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLH 162 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCc
Confidence 9999999999999988532 23678889999999999999999999999999999999998877
Q ss_pred CCEEEeecCccccccCCC---CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHH
Q 022401 158 PRLKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKT 233 (298)
Q Consensus 158 ~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~ 233 (298)
++|+|||++....... ......++..|+|||.+.+..++.+ +|+||||+++|+|++ |..||...... ..
T Consensus 163 --~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Dv~slG~il~el~~~g~~p~~~~~~~----~~ 235 (283)
T cd05090 163 --VKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSD-SDIWSFGVVLWEIFSFGLQPYYGFSNQ----EV 235 (283)
T ss_pred --EEeccccccccccCCcceecccCCCccceecChHHhccCCCCch-hhhHHHHHHHHHHHcCCCCCCCCCCHH----HH
Confidence 9999999986432221 1122334567999999877776555 999999999999998 88898765431 22
Q ss_pred HHHHhhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchh
Q 022401 234 IQRILSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
...+.. ....+.+..+++++.+++.+||+.||.+||++.+++.+
T Consensus 236 ~~~~~~-~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 236 IEMVRK-RQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred HHHHHc-CCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 222222 22233445579999999999999999999999887753
No 224
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.9e-40 Score=284.08 Aligned_cols=256 Identities=27% Similarity=0.417 Sum_probs=208.3
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC-CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEec
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG-DKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY 100 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~ 100 (298)
.++|++.+.||+|+||.||++.+..++..+++|.+... ....+.+.+|+.+++.++|||++++++++...+..++|+||
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~ 97 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEY 97 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEec
Confidence 47999999999999999999999888899999998643 33345678899999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC-CCCC
Q 022401 101 ASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-QPKS 179 (298)
Q Consensus 101 ~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~-~~~~ 179 (298)
+++++|.+++... .++..++..++.+++.|+.+||++|++|+||+|+||+++.++. ++|+|||++....... ....
T Consensus 98 ~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~--~kL~dfg~~~~~~~~~~~~~~ 174 (293)
T cd06647 98 LAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS--VKLTDFGFCAQITPEQSKRST 174 (293)
T ss_pred CCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCC--EEEccCcceeccccccccccc
Confidence 9999999988653 5788999999999999999999999999999999999998876 9999999875333222 2223
Q ss_pred CCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHH
Q 022401 180 TVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLIS 259 (298)
Q Consensus 180 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (298)
..+++.|++||.+....++.+ +|+||||+++|++++|..||...+....... ..............++.++.++++
T Consensus 175 ~~~~~~y~~PE~~~~~~~~~~-~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~li~ 250 (293)
T cd06647 175 MVGTPYWMAPEVVTRKAYGPK-VDIWSLGIMAIEMVEGEPPYLNENPLRALYL---IATNGTPELQNPEKLSAIFRDFLN 250 (293)
T ss_pred ccCChhhcCchhhccCCCCch-hhHHHHHHHHHHHHhCCCCCCCCChhhheee---hhcCCCCCCCCccccCHHHHHHHH
Confidence 457788999999877777555 9999999999999999999976543221111 111222233334457889999999
Q ss_pred HhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 260 RIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 260 ~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
+||..+|.+||++ .+++.|||+...
T Consensus 251 ~~l~~~p~~Rp~~--------~~il~h~~~~~~ 275 (293)
T cd06647 251 RCLEMDVEKRGSA--------KELLQHPFLKIA 275 (293)
T ss_pred HHccCChhhCcCH--------HHHhcCHHHhcC
Confidence 9999999999987 566678887643
No 225
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=4.4e-40 Score=278.17 Aligned_cols=248 Identities=24% Similarity=0.448 Sum_probs=198.6
Q ss_pred CCeeEEeee--ccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcC-CCCCeeeeeEEEEeCCeEEEEEe
Q 022401 23 DRYDFVRDI--GSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSL-RHPNIVRFKEVILTPTHLAIVME 99 (298)
Q Consensus 23 ~~y~~~~~l--g~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~~ 99 (298)
++|++.+.+ |+|+||.||++.++.++..+++|.+........ |......+ +|||++++++++..++.+++|+|
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~----e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e 89 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI----EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMD 89 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh----hHHHHHHhhcCCCEEEEEEEEecCCeeEEEEE
Confidence 467777777 999999999999999999999999875432211 22222212 79999999999999999999999
Q ss_pred ccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCC-CCCEEEeecCccccccCCCCCC
Q 022401 100 YASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSP-APRLKICDFGYSKSSVLHSQPK 178 (298)
Q Consensus 100 ~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~-~~~~~l~d~~~~~~~~~~~~~~ 178 (298)
|+++++|.+++.....+++.+++.++.|++.|+.+||+.|++|+||+|+||+++.++ . ++|+|||++..... ..
T Consensus 90 ~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~--~~l~dfg~~~~~~~---~~ 164 (267)
T PHA03390 90 YIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDR--IYLCDYGLCKIIGT---PS 164 (267)
T ss_pred cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCe--EEEecCccceecCC---Cc
Confidence 999999999998887899999999999999999999999999999999999999887 5 99999998764332 22
Q ss_pred CCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchh-HHHHHHHHhhcCCCCCCCCCCCHHHHHH
Q 022401 179 STVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKD-FRKTIQRILSVQYSVPDTNPISQECRDL 257 (298)
Q Consensus 179 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (298)
...++..|+|||.+.+..++.+ +|+||+|+++++|++|..||........ ........ . ...+.....++.+.+|
T Consensus 165 ~~~~~~~y~aPE~~~~~~~~~~-~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~l 240 (267)
T PHA03390 165 CYDGTLDYFSPEKIKGHNYDVS-FDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-Q--KKLPFIKNVSKNANDF 240 (267)
T ss_pred cCCCCCcccChhhhcCCCCCch-hhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-c--ccCCcccccCHHHHHH
Confidence 3457889999999987777655 9999999999999999999986543321 12222222 2 2223334589999999
Q ss_pred HHHhhhhCCCCcccccccchhhhHHHhhhhhhh
Q 022401 258 ISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMF 290 (298)
Q Consensus 258 i~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~ 290 (298)
|.+||+.||.+||+. ..++++|||+.
T Consensus 241 i~~~l~~~p~~R~~~-------~~~~l~h~~~~ 266 (267)
T PHA03390 241 VQSMLKYNINYRLTN-------YNEIIKHPFLK 266 (267)
T ss_pred HHHHhccChhhCCch-------HHHHhcCCccc
Confidence 999999999999953 36667899975
No 226
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=3.9e-40 Score=278.22 Aligned_cols=251 Identities=24% Similarity=0.377 Sum_probs=203.8
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccC---CcEEEEEEeecCC--cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEE
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVT---KELVAVKYIERGD--KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLA 95 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~---~~~~aiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 95 (298)
+.++|++.+.||+|+||.||+|....+ ...+++|.+.... .....+.+|+.++++++||||+++.+++...+..+
T Consensus 2 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (266)
T cd05033 2 DPSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVM 81 (266)
T ss_pred ChHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceE
Confidence 356899999999999999999998643 4579999876543 22356788999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC
Q 022401 96 IVMEYASGGELFERICNA-GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH 174 (298)
Q Consensus 96 lv~~~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~ 174 (298)
+++|++++++|.+++... +.++...+..++.+++.|+.|||+++++|+||+|+||+++.++. ++|+|||++......
T Consensus 82 iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~--~~l~dfg~~~~~~~~ 159 (266)
T cd05033 82 IITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLV--CKVSDFGLSRRLEDS 159 (266)
T ss_pred EEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCC--EEECccchhhccccc
Confidence 999999999999998654 46899999999999999999999999999999999999998887 999999998754311
Q ss_pred CC---CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCC
Q 022401 175 SQ---PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPI 250 (298)
Q Consensus 175 ~~---~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (298)
.. .....++..|+|||.+.+..++.+ +||||||+++|++++ |..||...... .....+.. ....+....+
T Consensus 160 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~-~Dv~slG~~l~~l~~~g~~p~~~~~~~----~~~~~~~~-~~~~~~~~~~ 233 (266)
T cd05033 160 EATYTTKGGKIPIRWTAPEAIAYRKFTSA-SDVWSFGIVMWEVMSYGERPYWDMSNQ----DVIKAVED-GYRLPPPMDC 233 (266)
T ss_pred ccceeccCCCCCccccChhhhccCCCccc-cchHHHHHHHHHHHccCCCCCCCCCHH----HHHHHHHc-CCCCCCCCCC
Confidence 11 112234567999999887777665 999999999999998 99999765432 22223222 2233344567
Q ss_pred CHHHHHHHHHhhhhCCCCcccccccchhh
Q 022401 251 SQECRDLISRIFVADPAAVSIFFFPLNMS 279 (298)
Q Consensus 251 ~~~l~~li~~~l~~dp~~Rps~~~~l~~~ 279 (298)
++++.+++.+||+.+|++||++.+++++.
T Consensus 234 ~~~l~~li~~cl~~~p~~Rp~~~ei~~~l 262 (266)
T cd05033 234 PSALYQLMLDCWQKDRNERPTFSQIVSTL 262 (266)
T ss_pred CHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 99999999999999999999999988654
No 227
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=3.3e-40 Score=278.22 Aligned_cols=248 Identities=23% Similarity=0.343 Sum_probs=200.7
Q ss_pred CCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEe
Q 022401 20 HDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVME 99 (298)
Q Consensus 20 ~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~ 99 (298)
...++|++.+.||+|++|.||++.+..++ .+++|.+.......+.+.+|+.++++++|||++++++.+. ....++|+|
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~-~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e 80 (262)
T cd05071 3 IPRESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTE 80 (262)
T ss_pred CChHHeeEeeecCCCCCCcEEEEEecCCc-eEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEE
Confidence 34578999999999999999999887554 5999998865555677899999999999999999999874 456789999
Q ss_pred ccCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCC-
Q 022401 100 YASGGELFERICNA--GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ- 176 (298)
Q Consensus 100 ~~~~~sL~~~l~~~--~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~- 176 (298)
++++++|.+++... ..++...+..++.+++.||++||+.+++|+||+|+||++++++. ++|+|||.+........
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~--~~L~dfg~~~~~~~~~~~ 158 (262)
T cd05071 81 YMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV--CKVADFGLARLIEDNEYT 158 (262)
T ss_pred cCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCc--EEeccCCceeeccccccc
Confidence 99999999999653 35788999999999999999999999999999999999998877 99999998864432221
Q ss_pred -CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHH
Q 022401 177 -PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQEC 254 (298)
Q Consensus 177 -~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (298)
.....++..|+|||...+..++.+ +|+||||+++|++++ |..||....... ....+.. ....+....++.++
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~-~DvwslG~~l~ellt~g~~p~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~l 232 (262)
T cd05071 159 ARQGAKFPIKWTAPEAALYGRFTIK-SDVWSFGILLTELTTKGRVPYPGMVNRE----VLDQVER-GYRMPCPPECPESL 232 (262)
T ss_pred cccCCcccceecCHhHhccCCCCch-hhHHHHHHHHHHHHcCCCCCCCCCChHH----HHHHHhc-CCCCCCccccCHHH
Confidence 112334567999999877777655 999999999999999 788887654322 2222222 22233344578999
Q ss_pred HHHHHHhhhhCCCCcccccccch
Q 022401 255 RDLISRIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 255 ~~li~~~l~~dp~~Rps~~~~l~ 277 (298)
.+++.+||+.||++||++.+++.
T Consensus 233 ~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 233 HDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred HHHHHHHccCCcccCCCHHHHHH
Confidence 99999999999999999988775
No 228
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=2.9e-40 Score=281.58 Aligned_cols=251 Identities=27% Similarity=0.388 Sum_probs=197.5
Q ss_pred CCe-eEEeeeccCCeEEEEEEE----EccCCcEEEEEEeecCCc--chHHHHHHHHHHhcCCCCCeeeeeEEEEeC--Ce
Q 022401 23 DRY-DFVRDIGSGNFGVARLMR----DKVTKELVAVKYIERGDK--IDENVQREIINHRSLRHPNIVRFKEVILTP--TH 93 (298)
Q Consensus 23 ~~y-~~~~~lg~g~~~~vy~~~----~~~~~~~~aiK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~ 93 (298)
++| ++.+.||+|+||.||.+. ...++..+|+|.+..... ....+.+|+.++++++|||++++.+++... ..
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKG 82 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCce
Confidence 456 999999999999998765 335678899999875432 456778999999999999999999987653 46
Q ss_pred EEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccC
Q 022401 94 LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 173 (298)
Q Consensus 94 ~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~ 173 (298)
+++++||+++++|.+++... .+++..++.++.+++.|+.|||++|++|+||+|+||+++.++. ++|+|||++.....
T Consensus 83 ~~lv~e~~~~~~l~~~~~~~-~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~--~~l~dfg~~~~~~~ 159 (283)
T cd05080 83 LQLIMEYVPLGSLRDYLPKH-KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRL--VKIGDFGLAKAVPE 159 (283)
T ss_pred EEEEecCCCCCCHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCc--EEEeecccccccCC
Confidence 89999999999999998654 5899999999999999999999999999999999999998877 99999998864432
Q ss_pred CCC----CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchh----------HHHHHHHHhh
Q 022401 174 HSQ----PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKD----------FRKTIQRILS 239 (298)
Q Consensus 174 ~~~----~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~----------~~~~~~~~~~ 239 (298)
... .....++..|+|||.+.+...+.+ +||||||+++++|++|..||........ ..........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~-~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd05080 160 GHEYYRVREDGDSPVFWYAVECLKENKFSYA-SDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLE 238 (283)
T ss_pred cchhhccCCCCCCCceeeCHhHhcccCCCcc-cccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhh
Confidence 221 122234567999999877776665 9999999999999999999865432100 0001111111
Q ss_pred cCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccch
Q 022401 240 VQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 240 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~ 277 (298)
.....+.+...+.++.+++.+||+.||++|||+.+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 239 RGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred cCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 22233334557899999999999999999999998885
No 229
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=2.4e-40 Score=286.53 Aligned_cols=250 Identities=21% Similarity=0.329 Sum_probs=202.1
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccCCc----EEEEEEeecC--CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeE
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVTKE----LVAVKYIERG--DKIDENVQREIINHRSLRHPNIVRFKEVILTPTHL 94 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~----~~aiK~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 94 (298)
...+|++.+.||+|+||.||++.+..++. .+|+|.+... ......+.+|+.+++.++||||+++++++... ..
T Consensus 5 ~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~ 83 (316)
T cd05108 5 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TV 83 (316)
T ss_pred chhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cc
Confidence 45689999999999999999999765554 3899987643 23346788899999999999999999998765 56
Q ss_pred EEEEeccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccC
Q 022401 95 AIVMEYASGGELFERICNA-GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 173 (298)
Q Consensus 95 ~lv~~~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~ 173 (298)
+++++++.+++|.+.+... ..++...++.++.|++.||+|||+.|++|+||||+||+++.++. ++|+|||++.....
T Consensus 84 ~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~--~kl~DfG~a~~~~~ 161 (316)
T cd05108 84 QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQH--VKITDFGLAKLLGA 161 (316)
T ss_pred eeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCc--EEEccccccccccC
Confidence 7899999999999998764 35889999999999999999999999999999999999998887 99999999875433
Q ss_pred CCCC---CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCC
Q 022401 174 HSQP---KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNP 249 (298)
Q Consensus 174 ~~~~---~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (298)
.... .....+..|++||.+.+..++.+ +||||||+++|++++ |..||....... ...+.......+.+..
T Consensus 162 ~~~~~~~~~~~~~~~y~apE~~~~~~~~~~-~Di~slGv~l~el~t~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~ 235 (316)
T cd05108 162 DEKEYHAEGGKVPIKWMALESILHRIYTHQ-SDVWSYGVTVWELMTFGSKPYDGIPASE-----ISSILEKGERLPQPPI 235 (316)
T ss_pred CCcceeccCCccceeecChHHhccCCCCch-hhhHHHHHHHHHHHcCCCCCCCCCCHHH-----HHHHHhCCCCCCCCCC
Confidence 2221 11223567999999887777665 999999999999997 999997654321 2223333444455555
Q ss_pred CCHHHHHHHHHhhhhCCCCcccccccchhh
Q 022401 250 ISQECRDLISRIFVADPAAVSIFFFPLNMS 279 (298)
Q Consensus 250 ~~~~l~~li~~~l~~dp~~Rps~~~~l~~~ 279 (298)
++.++.+++.+||+.||.+||++.+++...
T Consensus 236 ~~~~~~~li~~cl~~~p~~Rps~~~l~~~l 265 (316)
T cd05108 236 CTIDVYMIMVKCWMIDADSRPKFRELIIEF 265 (316)
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 789999999999999999999999998753
No 230
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=2.1e-40 Score=277.70 Aligned_cols=242 Identities=25% Similarity=0.362 Sum_probs=195.6
Q ss_pred eeeccCCeEEEEEEEEccCCcEEEEEEeecC--CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEeccCCCCH
Q 022401 29 RDIGSGNFGVARLMRDKVTKELVAVKYIERG--DKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 106 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~~~sL 106 (298)
+.||+|+||.||.+.+..+++.+++|.+... ......+.+|++++++++||||+++++++......++|+||+.+++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 4689999999999999989999999987643 23346688999999999999999999999999999999999999999
Q ss_pred HHHHHhC-CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCC---CCCCC
Q 022401 107 FERICNA-GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP---KSTVG 182 (298)
Q Consensus 107 ~~~l~~~-~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~---~~~~~ 182 (298)
.+++... ..+++..++.++.|++.||.|||++|++|+||+|+||+++.++. ++|+|||++......... .....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~--~kl~dfg~~~~~~~~~~~~~~~~~~~ 158 (252)
T cd05084 81 LTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNV--LKISDFGMSREEEDGVYASTGGMKQI 158 (252)
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCc--EEECccccCcccccccccccCCCCCC
Confidence 9998654 45899999999999999999999999999999999999998876 999999987643321111 11122
Q ss_pred CCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHh
Q 022401 183 TPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRI 261 (298)
Q Consensus 183 ~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 261 (298)
...|+|||.+.+..++.+ +|+||||+++|++++ |..||........ ... .......+.....+.++.+++.+|
T Consensus 159 ~~~y~aPE~~~~~~~~~~-~Dv~slG~il~e~~~~~~~p~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~li~~~ 232 (252)
T cd05084 159 PVKWTAPEALNYGRYSSE-SDVWSFGILLWEAFSLGAVPYANLSNQQT----REA-IEQGVRLPCPELCPDAVYRLMERC 232 (252)
T ss_pred ceeecCchhhcCCCCChH-HHHHHHHHHHHHHHhCCCCCccccCHHHH----HHH-HHcCCCCCCcccCCHHHHHHHHHH
Confidence 456999999877776665 999999999999997 8888876543221 111 112222233445789999999999
Q ss_pred hhhCCCCcccccccchh
Q 022401 262 FVADPAAVSIFFFPLNM 278 (298)
Q Consensus 262 l~~dp~~Rps~~~~l~~ 278 (298)
|+.||++|||+.+++.+
T Consensus 233 l~~~p~~Rps~~~~~~~ 249 (252)
T cd05084 233 WEYDPGQRPSFSTVHQE 249 (252)
T ss_pred cCCChhhCcCHHHHHHH
Confidence 99999999999888753
No 231
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=2.8e-40 Score=293.61 Aligned_cols=255 Identities=24% Similarity=0.366 Sum_probs=202.7
Q ss_pred CCCCCCCeeEEeeeccCCeEEEEEEEEccC-----CcEEEEEEeecCCc--chHHHHHHHHHHhcCC-CCCeeeeeEEEE
Q 022401 18 IMHDSDRYDFVRDIGSGNFGVARLMRDKVT-----KELVAVKYIERGDK--IDENVQREIINHRSLR-HPNIVRFKEVIL 89 (298)
Q Consensus 18 ~~~~~~~y~~~~~lg~g~~~~vy~~~~~~~-----~~~~aiK~~~~~~~--~~~~~~~e~~~l~~l~-h~~i~~~~~~~~ 89 (298)
.....++|++++.||.|+||.||++.+... +..||+|++..... ..+.+.+|+.+++++. ||||+++++++.
T Consensus 32 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~ 111 (400)
T cd05105 32 WEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACT 111 (400)
T ss_pred eeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEc
Confidence 455678999999999999999999987432 34699999865432 2356889999999996 999999999999
Q ss_pred eCCeEEEEEeccCCCCHHHHHHhC--------------------------------------------------------
Q 022401 90 TPTHLAIVMEYASGGELFERICNA-------------------------------------------------------- 113 (298)
Q Consensus 90 ~~~~~~lv~~~~~~~sL~~~l~~~-------------------------------------------------------- 113 (298)
.....++|+||+++++|.+++...
T Consensus 112 ~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (400)
T cd05105 112 KSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPM 191 (400)
T ss_pred cCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchh
Confidence 999999999999999998887542
Q ss_pred ----------------------------------------CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEee
Q 022401 114 ----------------------------------------GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLD 153 (298)
Q Consensus 114 ----------------------------------------~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~ 153 (298)
..++..++..++.|++.||+|||+.+++|+||+|+||+++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~ 271 (400)
T cd05105 192 LEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLA 271 (400)
T ss_pred hhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEe
Confidence 1367778899999999999999999999999999999999
Q ss_pred CCCCCCEEEeecCccccccCCC---CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchh
Q 022401 154 GSPAPRLKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKD 229 (298)
Q Consensus 154 ~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~ 229 (298)
.++. ++|+|||++....... ......++..|+|||.+.+..++.+ +||||||+++|+|++ |..||........
T Consensus 272 ~~~~--~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~DiwSlGvil~ellt~g~~P~~~~~~~~~ 348 (400)
T cd05105 272 QGKI--VKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTL-SDVWSYGILLWEIFSLGGTPYPGMIVDST 348 (400)
T ss_pred CCCE--EEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCch-hhHHHHHHHHHHHHHCCCCCCcccchhHH
Confidence 8876 9999999986432221 1122335678999999877777665 999999999999997 8899876543222
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhh
Q 022401 230 FRKTIQRILSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMS 279 (298)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~ 279 (298)
+.. . .......+....++.++.+++.+||+.||++|||+.++.++.
T Consensus 349 ~~~---~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l 394 (400)
T cd05105 349 FYN---K-IKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIV 394 (400)
T ss_pred HHH---H-HhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHH
Confidence 222 2 222233344456899999999999999999999998887643
No 232
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=2.1e-40 Score=282.38 Aligned_cols=254 Identities=29% Similarity=0.426 Sum_probs=202.0
Q ss_pred eeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC---cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEecc
Q 022401 25 YDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD---KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYA 101 (298)
Q Consensus 25 y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~ 101 (298)
|++.+.||.|++|.||++.+..+|+.|++|++.... .....+.+|+..++.++|||++++++++.+....+++++|+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 678999999999999999998899999999987543 22356788999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC-CCC
Q 022401 102 SGGELFERICNAG--RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-QPK 178 (298)
Q Consensus 102 ~~~sL~~~l~~~~--~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~-~~~ 178 (298)
+ ++|.+++.... .+++..++.++.|++.||+|||+.+++|+||+|+||+++.++. ++|+|||++....... ...
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~--~~l~df~~~~~~~~~~~~~~ 157 (283)
T cd07835 81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGA--LKLADFGLARAFGVPVRTYT 157 (283)
T ss_pred C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCc--EEEeecccccccCCCccccC
Confidence 5 58998887665 6899999999999999999999999999999999999998776 9999999886433222 112
Q ss_pred CCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcC-----------------
Q 022401 179 STVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQ----------------- 241 (298)
Q Consensus 179 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~----------------- 241 (298)
...++..|+|||.+.+......++|+||+|+++|+|++|..||...+..+...+..+......
T Consensus 158 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd07835 158 HEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTF 237 (283)
T ss_pred ccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhc
Confidence 334577899999876654434459999999999999999999987654333333222110000
Q ss_pred C------CCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 242 Y------SVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 242 ~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
. .......++.++.++|.+||+.||.+|||+. ++++|||+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~--------~il~~~~~ 283 (283)
T cd07835 238 PKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAK--------AALQHPYF 283 (283)
T ss_pred ccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHH--------HHhcCCCC
Confidence 0 0011234678999999999999999999884 55577775
No 233
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=4.2e-40 Score=283.90 Aligned_cols=263 Identities=25% Similarity=0.394 Sum_probs=202.1
Q ss_pred cCCCCCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc---chHHHHHHHHHHhcCCCCCeeeeeEEEEeC
Q 022401 15 DMPIMHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK---IDENVQREIINHRSLRHPNIVRFKEVILTP 91 (298)
Q Consensus 15 ~~~~~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 91 (298)
.+++..+.++|++.+.||+|++|.||+|.+..+++.+|+|.+..... ....+.+|+.++++++|||++++++++...
T Consensus 4 ~~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 83 (310)
T cd07865 4 EFPFCDEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTK 83 (310)
T ss_pred cCcccchhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecc
Confidence 45667778899999999999999999999999999999998865322 223456899999999999999999998754
Q ss_pred C--------eEEEEEeccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEE
Q 022401 92 T--------HLAIVMEYASGGELFERICNA-GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKI 162 (298)
Q Consensus 92 ~--------~~~lv~~~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l 162 (298)
. ..++|+||+.+ +|.+.+... ..+++.+++.++.|++.||.|||+.|++|+||+|+||+++.++. ++|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~--~kl 160 (310)
T cd07865 84 ATPYNRYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGI--LKL 160 (310)
T ss_pred cccccCCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCc--EEE
Confidence 3 45999999965 777777554 36899999999999999999999999999999999999998887 999
Q ss_pred eecCccccccCCCCC-----CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHH
Q 022401 163 CDFGYSKSSVLHSQP-----KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRI 237 (298)
Q Consensus 163 ~d~~~~~~~~~~~~~-----~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~ 237 (298)
+|||++......... ....++..|+|||.+.+......++|+||+|+++|+|++|..||...+.... ...+..+
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~-~~~~~~~ 239 (310)
T cd07865 161 ADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQ-LTLISQL 239 (310)
T ss_pred CcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHH
Confidence 999988644332211 2234567899999887655434559999999999999999999977554322 2222222
Q ss_pred hhcCC----------------CCCC-----------CCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 238 LSVQY----------------SVPD-----------TNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 238 ~~~~~----------------~~~~-----------~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
..... ..+. ....+..+.++|.+||..||.+|||+ .++++|||+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~--------~e~l~h~~f 310 (310)
T cd07865 240 CGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDA--------DTALNHDFF 310 (310)
T ss_pred hCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCH--------HHHhcCCCC
Confidence 21100 0000 00124678899999999999999987 555578885
No 234
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=4.4e-40 Score=280.42 Aligned_cols=255 Identities=27% Similarity=0.422 Sum_probs=202.9
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc--chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEecc
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK--IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYA 101 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~ 101 (298)
+|++.+.||.|++|.||++.+..+|..+++|.+..... ..+.+.+|+.++++++|+|++++++++.+.+..++|+||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 58999999999999999999998999999999876432 2456778999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC-CC
Q 022401 102 SGGELFERICNA---GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-QP 177 (298)
Q Consensus 102 ~~~sL~~~l~~~---~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~-~~ 177 (298)
.+ +|.+++... ..+++..+..++.|++.|++|||+.|++|+||+|+||++++++. ++|+|||++....... ..
T Consensus 81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~--~~l~d~g~~~~~~~~~~~~ 157 (284)
T cd07836 81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGE--LKLADFGLARAFGIPVNTF 157 (284)
T ss_pred Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCc--EEEeecchhhhhcCCcccc
Confidence 75 787777543 35899999999999999999999999999999999999998887 9999999886433221 11
Q ss_pred CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcC--------------CC
Q 022401 178 KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQ--------------YS 243 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~--------------~~ 243 (298)
....++..|++||.+.+......++|+||+|+++|++++|..||...+..+............. ..
T Consensus 158 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd07836 158 SNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPT 237 (284)
T ss_pred ccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhccc
Confidence 2334677899999887655445559999999999999999999988765544433322210000 00
Q ss_pred CCC---------CCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 244 VPD---------TNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 244 ~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
.+. ....++++.+++.+||+.||.+||++ .++++|||+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~--------~~~l~~~~f 284 (284)
T cd07836 238 FPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISA--------HDALQHPWF 284 (284)
T ss_pred ccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCH--------HHHhcCCCC
Confidence 000 11357889999999999999999987 555577875
No 235
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=9.1e-41 Score=281.22 Aligned_cols=247 Identities=23% Similarity=0.340 Sum_probs=205.1
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc-chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEec
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY 100 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~ 100 (298)
..+|++.+.||.|++|.||.+.+.. +..+++|.+..... ....+.+|+.+++.++|+|++++++++.....+++++||
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 83 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL 83 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence 3579999999999999999999987 78899999876544 456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCC-
Q 022401 101 ASGGELFERICNA--GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP- 177 (298)
Q Consensus 101 ~~~~sL~~~l~~~--~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~- 177 (298)
+++++|.+++... ..++...+..++.+++.|++|||++|++|+||+|+||+++.++. ++|+|||.+.........
T Consensus 84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~--~kl~d~g~~~~~~~~~~~~ 161 (261)
T cd05148 84 MEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLV--CKVADFGLARLIKEDVYLS 161 (261)
T ss_pred cccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCce--EEEccccchhhcCCccccc
Confidence 9999999999753 35889999999999999999999999999999999999998887 999999988644322211
Q ss_pred CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHH
Q 022401 178 KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRD 256 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 256 (298)
....++..|++||.+....++.+ +|+||||+++|++++ |..||......+.+ ..+. .....+.+...++++.+
T Consensus 162 ~~~~~~~~~~~PE~~~~~~~~~~-~DiwslG~~l~~l~~~g~~p~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~ 235 (261)
T cd05148 162 SDKKIPYKWTAPEAASHGTFSTK-SDVWSFGILLYEMFTYGQVPYPGMNNHEVY----DQIT-AGYRMPCPAKCPQEIYK 235 (261)
T ss_pred cCCCCceEecCHHHHccCCCCch-hhHHHHHHHHHHHHcCCCCCCCcCCHHHHH----HHHH-hCCcCCCCCCCCHHHHH
Confidence 12234567999999877766655 999999999999998 88999775543222 2222 22333445568999999
Q ss_pred HHHHhhhhCCCCcccccccch
Q 022401 257 LISRIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 257 li~~~l~~dp~~Rps~~~~l~ 277 (298)
++.+||+.||.+|||+.+++.
T Consensus 236 ~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 236 IMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred HHHHHcCCCchhCcCHHHHHH
Confidence 999999999999999988875
No 236
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=3.6e-40 Score=283.56 Aligned_cols=256 Identities=23% Similarity=0.360 Sum_probs=206.8
Q ss_pred CCCCCCCCCeeEEeeeccCCeEEEEEEEEc-----cCCcEEEEEEeecCC--cchHHHHHHHHHHhcC-CCCCeeeeeEE
Q 022401 16 MPIMHDSDRYDFVRDIGSGNFGVARLMRDK-----VTKELVAVKYIERGD--KIDENVQREIINHRSL-RHPNIVRFKEV 87 (298)
Q Consensus 16 ~~~~~~~~~y~~~~~lg~g~~~~vy~~~~~-----~~~~~~aiK~~~~~~--~~~~~~~~e~~~l~~l-~h~~i~~~~~~ 87 (298)
..+....++|++.+.||+|+||.||.+... .++..+|+|.+.... ...+.+.+|+.+++++ +||||++++++
T Consensus 28 ~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 107 (302)
T cd05055 28 LKWEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGA 107 (302)
T ss_pred ccccccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEE
Confidence 345677789999999999999999999752 345579999886543 2235688999999999 79999999999
Q ss_pred EEeCCeEEEEEeccCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeec
Q 022401 88 ILTPTHLAIVMEYASGGELFERICNAG--RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDF 165 (298)
Q Consensus 88 ~~~~~~~~lv~~~~~~~sL~~~l~~~~--~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~ 165 (298)
+...+..++++||+.+++|.+++.... .++..++..++.+++.||+|||+++++|+||+|+||+++.++. ++|+||
T Consensus 108 ~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~--~~l~df 185 (302)
T cd05055 108 CTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKI--VKICDF 185 (302)
T ss_pred EecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCe--EEECCC
Confidence 999999999999999999999986543 3899999999999999999999999999999999999987776 999999
Q ss_pred CccccccCCCC---CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcC
Q 022401 166 GYSKSSVLHSQ---PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQ 241 (298)
Q Consensus 166 ~~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~ 241 (298)
|++........ .....++..|+|||.+.+..++.+ +||||+|+++|++++ |..||........+.+.. ...
T Consensus 186 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~----~~~ 260 (302)
T cd05055 186 GLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFE-SDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLI----KEG 260 (302)
T ss_pred cccccccCCCceeecCCCCcccccCCHhhhccCCCCcH-hHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHH----HcC
Confidence 99864432221 122335678999999887777665 999999999999998 999998765543332222 222
Q ss_pred CCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchh
Q 022401 242 YSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 242 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
.........++++.+++.+||+.+|++|||+.+++..
T Consensus 261 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~ 297 (302)
T cd05055 261 YRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQL 297 (302)
T ss_pred CcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 2223334578999999999999999999999998863
No 237
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-41 Score=313.09 Aligned_cols=253 Identities=23% Similarity=0.358 Sum_probs=215.8
Q ss_pred CCCCCCeeEEeeeccCCeEEEEEEEEccC-Cc----EEEEEEeecC--CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeC
Q 022401 19 MHDSDRYDFVRDIGSGNFGVARLMRDKVT-KE----LVAVKYIERG--DKIDENVQREIINHRSLRHPNIVRFKEVILTP 91 (298)
Q Consensus 19 ~~~~~~y~~~~~lg~g~~~~vy~~~~~~~-~~----~~aiK~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 91 (298)
.+.....++.+.||+|.||.||.+..... +. .||+|.+.+. ......|.+|..+++.+.||||++++|++.+.
T Consensus 688 ~v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~ 767 (1025)
T KOG1095|consen 688 EVPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDS 767 (1025)
T ss_pred cCChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCC
Confidence 35567899999999999999999998643 32 3899988765 44456799999999999999999999999999
Q ss_pred CeEEEEEeccCCCCHHHHHHhC-------CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEee
Q 022401 92 THLAIVMEYASGGELFERICNA-------GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICD 164 (298)
Q Consensus 92 ~~~~lv~~~~~~~sL~~~l~~~-------~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d 164 (298)
...++++|||.+|+|..++.+. ..++..+++.++.+|++|++||+++++|||||...|+|++.... +|++|
T Consensus 768 ~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~--VKIaD 845 (1025)
T KOG1095|consen 768 GPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRV--VKIAD 845 (1025)
T ss_pred CCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCc--EEEcc
Confidence 9999999999999999999765 34899999999999999999999999999999999999998865 99999
Q ss_pred cCccccc---cCCCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhc
Q 022401 165 FGYSKSS---VLHSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSV 240 (298)
Q Consensus 165 ~~~~~~~---~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~ 240 (298)
||+|+.. ..+.......-...|||||.+....++++ +||||||+++||+++ |..||...+.. +.+.-...+
T Consensus 846 FGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtsk-SDvWsFGVllWEifslG~~PY~~~~n~----~v~~~~~~g 920 (1025)
T KOG1095|consen 846 FGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSK-SDVWSFGVLLWEIFSLGATPYPSRSNF----EVLLDVLEG 920 (1025)
T ss_pred cchhHhhhhchheeccCccccceecCCHHHHhhcccccc-cchhhhHHHHHHHHhCCCCCCCCcchH----HHHHHHHhC
Confidence 9999822 22223333345578999999999999888 999999999999999 77899987763 333334444
Q ss_pred CCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhh
Q 022401 241 QYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMS 279 (298)
Q Consensus 241 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~ 279 (298)
. +++.+..+|+.+.+++.+||+.+|++||++..+++..
T Consensus 921 g-RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~ 958 (1025)
T KOG1095|consen 921 G-RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQD 958 (1025)
T ss_pred C-ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhh
Confidence 4 8888888999999999999999999999999998744
No 238
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=2.7e-40 Score=290.43 Aligned_cols=256 Identities=27% Similarity=0.405 Sum_probs=201.2
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC---CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeC------
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG---DKIDENVQREIINHRSLRHPNIVRFKEVILTP------ 91 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 91 (298)
..++|++.+.||+|++|.||.+.+..+++.+|+|.+... ......+.+|+.++++++|||++++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 357899999999999999999999989999999988643 22334567899999999999999999998643
Q ss_pred CeEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccc
Q 022401 92 THLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSS 171 (298)
Q Consensus 92 ~~~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~ 171 (298)
...|+|+|++.+ +|.+.+... ++...+..++.|++.||+|||+.|++|+||+|+||+++.++. ++|+|||++...
T Consensus 94 ~~~~lv~e~~~~-~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~--~kL~Dfg~~~~~ 168 (353)
T cd07850 94 QDVYLVMELMDA-NLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTA 168 (353)
T ss_pred CcEEEEEeccCC-CHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCC--EEEccCccceeC
Confidence 357999999965 787777544 889999999999999999999999999999999999998887 999999998754
Q ss_pred cCCCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhc-----------
Q 022401 172 VLHSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSV----------- 240 (298)
Q Consensus 172 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~----------- 240 (298)
..........++..|+|||.+.+..++.+ +||||||+++|+|++|..||...+......+....+...
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (353)
T cd07850 169 GTSFMMTPYVVTRYYRAPEVILGMGYKEN-VDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPT 247 (353)
T ss_pred CCCCCCCCCcccccccCHHHHhCCCCCCc-hhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhh
Confidence 44333334457788999999988777665 999999999999999999998765433332222111000
Q ss_pred -------CCC--------------CC-----CCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhh
Q 022401 241 -------QYS--------------VP-----DTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMF 290 (298)
Q Consensus 241 -------~~~--------------~~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~ 290 (298)
... .+ .....++++.++|.+||+.||++|||+.++| +|||+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL--------~~~~~~ 315 (353)
T cd07850 248 VRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDAL--------QHPYIN 315 (353)
T ss_pred hhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHh--------cChhHh
Confidence 000 00 0112466799999999999999999885555 667664
No 239
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-42 Score=296.50 Aligned_cols=240 Identities=31% Similarity=0.438 Sum_probs=208.4
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEeccCC
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASG 103 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~~ 103 (298)
...-++=||.|+.|.||.++-+ ++.||||.+. +....++.-|+.|+||||+.|.|+|...-.+|+|||||..
T Consensus 125 ~IsELeWlGSGaQGAVF~Grl~--netVAVKKV~------elkETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~ 196 (904)
T KOG4721|consen 125 EISELEWLGSGAQGAVFLGRLH--NETVAVKKVR------ELKETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQ 196 (904)
T ss_pred HhhhhhhhccCcccceeeeecc--CceehhHHHh------hhhhhhHHHHHhccCcceeeEeeeecCCceeEEeeecccc
Confidence 3445677999999999999886 6679999654 3334578889999999999999999999999999999999
Q ss_pred CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCCCCCCCC
Q 022401 104 GELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGT 183 (298)
Q Consensus 104 ~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~ 183 (298)
|.|...|..+.+++...+..|.++|+.|++|||.+.|+|||||.-||||..+.. |||+|||-+.....-...-...|+
T Consensus 197 GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~--VKIsDFGTS~e~~~~STkMSFaGT 274 (904)
T KOG4721|consen 197 GQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDV--VKISDFGTSKELSDKSTKMSFAGT 274 (904)
T ss_pred ccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccce--EEeccccchHhhhhhhhhhhhhhh
Confidence 999999999999999999999999999999999999999999999999998887 999999987654444444556799
Q ss_pred CcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhhh
Q 022401 184 PAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIFV 263 (298)
Q Consensus 184 ~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 263 (298)
..|||||++++.+...+ .||||||++||||+||..||...+. ..++-.+......++.+..+|+.+.=|+++||+
T Consensus 275 VaWMAPEvIrnePcsEK-VDIwSfGVVLWEmLT~EiPYkdVds----sAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~ 349 (904)
T KOG4721|consen 275 VAWMAPEVIRNEPCSEK-VDIWSFGVVLWEMLTGEIPYKDVDS----SAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWN 349 (904)
T ss_pred HhhhCHHHhhcCCcccc-cceehhHHHHHHHHhcCCCccccch----heeEEeccCCcccccCcccCchHHHHHHHHHHh
Confidence 99999999988888777 9999999999999999999988665 233344444556777888899999999999999
Q ss_pred hCCCCcccccccchh
Q 022401 264 ADPAAVSIFFFPLNM 278 (298)
Q Consensus 264 ~dp~~Rps~~~~l~~ 278 (298)
-.|..||+|.+||-|
T Consensus 350 sKpRNRPSFrqil~H 364 (904)
T KOG4721|consen 350 SKPRNRPSFRQILLH 364 (904)
T ss_pred cCCCCCccHHHHHHH
Confidence 999999999998854
No 240
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=3.9e-40 Score=281.55 Aligned_cols=249 Identities=24% Similarity=0.371 Sum_probs=202.4
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEc-----cCCcEEEEEEeecCC-cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeE
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDK-----VTKELVAVKYIERGD-KIDENVQREIINHRSLRHPNIVRFKEVILTPTHL 94 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~-----~~~~~~aiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 94 (298)
...+|.+.+.||+|+||.||.+... .++..+++|.+.... .....+.+|+.++++++|||++++++++.....+
T Consensus 3 ~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 82 (288)
T cd05093 3 KRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL 82 (288)
T ss_pred chHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCcc
Confidence 3468999999999999999999852 345678999886543 3345688999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHHhCC-------------CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEE
Q 022401 95 AIVMEYASGGELFERICNAG-------------RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLK 161 (298)
Q Consensus 95 ~lv~~~~~~~sL~~~l~~~~-------------~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~ 161 (298)
++++||+++++|.+++...+ .+++..++.++.|++.||+|||+.|++|+||+|+||++++++. ++
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~--~k 160 (288)
T cd05093 83 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLL--VK 160 (288)
T ss_pred EEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCc--EE
Confidence 99999999999999986543 3899999999999999999999999999999999999998887 99
Q ss_pred EeecCccccccCCC---CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHH
Q 022401 162 ICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRI 237 (298)
Q Consensus 162 l~d~~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~ 237 (298)
|+|||++....... ......++..|+|||.+.+..++.+ +|+||||+++++|++ |..||...... .....+
T Consensus 161 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-sDiwslG~il~~l~t~g~~p~~~~~~~----~~~~~i 235 (288)
T cd05093 161 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTE-SDVWSLGVVLWEIFTYGKQPWYQLSNN----EVIECI 235 (288)
T ss_pred eccCCccccccCCceeecCCCCCccccccCHHHhccCCCCch-hhHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHHH
Confidence 99999886433221 1222334668999999877777665 999999999999998 88998776542 233333
Q ss_pred hhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccch
Q 022401 238 LSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 238 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~ 277 (298)
..+.. .......+.++.+++.+||+.||.+|||+.+++.
T Consensus 236 ~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 236 TQGRV-LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred HcCCc-CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 33332 2223347899999999999999999999988864
No 241
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.2e-39 Score=272.92 Aligned_cols=250 Identities=31% Similarity=0.462 Sum_probs=208.1
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc---chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEec
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK---IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY 100 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~ 100 (298)
+|++.+.||+|++|.||.+.+..+++.+++|.+..... ..+.+.+|++++++++|+|++++++++.+.+..++++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 58999999999999999999988899999999877643 446788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCC-CCC
Q 022401 101 ASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ-PKS 179 (298)
Q Consensus 101 ~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~-~~~ 179 (298)
+++++|.+.+.....+++..++.++.+++.++.+||+.|++|+||+|+||+++.++. ++|+|||++........ ...
T Consensus 81 ~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~--~~l~d~~~~~~~~~~~~~~~~ 158 (254)
T cd06627 81 AENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGV--VKLADFGVATKLNDVSKDDAS 158 (254)
T ss_pred CCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCC--EEEeccccceecCCCcccccc
Confidence 999999999988888999999999999999999999999999999999999998776 99999998875443332 233
Q ss_pred CCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHH
Q 022401 180 TVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLIS 259 (298)
Q Consensus 180 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (298)
..++..|++||...+...+.+ +|+|++|++++++++|..||....... ......... ....+..+++++.+++.
T Consensus 159 ~~~~~~y~~pe~~~~~~~~~~-~Dv~~lG~~l~~l~~g~~p~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~~i~ 232 (254)
T cd06627 159 VVGTPYWMAPEVIEMSGASTA-SDIWSLGCTVIELLTGNPPYYDLNPMA---ALFRIVQDD--HPPLPEGISPELKDFLM 232 (254)
T ss_pred cccchhhcCHhhhcCCCCCcc-hhHHHHHHHHHHHHhCCCCCCCccHHH---HHHHHhccC--CCCCCCCCCHHHHHHHH
Confidence 457788999999877665444 999999999999999999998655322 111111122 22234457899999999
Q ss_pred HhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 260 RIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 260 ~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
+||+.+|++|||+ .+++.|||+
T Consensus 233 ~~l~~~p~~R~~~--------~~~l~~~~~ 254 (254)
T cd06627 233 QCFQKDPNLRPTA--------KQLLKHPWI 254 (254)
T ss_pred HHHhCChhhCcCH--------HHHhcCCCC
Confidence 9999999999988 455566764
No 242
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=1e-39 Score=276.04 Aligned_cols=256 Identities=29% Similarity=0.417 Sum_probs=200.6
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC-cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEec
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD-KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY 100 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~ 100 (298)
.+.......||+|+||.||++.+..++..+++|.+.... ...+.+.+|+.++++++|+||+++++++..++..++++|+
T Consensus 7 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 86 (268)
T cd06624 7 YDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQ 86 (268)
T ss_pred cccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEec
Confidence 344555578999999999999998889999999887543 3345688999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhC-CCC--CHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC-C
Q 022401 101 ASGGELFERICNA-GRF--SEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-Q 176 (298)
Q Consensus 101 ~~~~sL~~~l~~~-~~~--~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~-~ 176 (298)
+++++|.+++... ..+ +...+..++.|++.|+.|||+.|++|+||+|+||+++.+.. .++|+|||++....... .
T Consensus 87 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~-~~~l~dfg~~~~~~~~~~~ 165 (268)
T cd06624 87 VPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSG-VVKISDFGTSKRLAGINPC 165 (268)
T ss_pred CCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCC-eEEEecchhheecccCCCc
Confidence 9999999998754 445 78889999999999999999999999999999999976332 49999999876443222 1
Q ss_pred CCCCCCCCcccCcccccccc-CCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHH
Q 022401 177 PKSTVGTPAYIAPEVLLRHE-YDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECR 255 (298)
Q Consensus 177 ~~~~~~~~~~~aPE~~~~~~-~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 255 (298)
.....++..|+|||.+.+.. ....++|+||+|+++|++++|..||.......... .......... ..+..+++++.
T Consensus 166 ~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~ 242 (268)
T cd06624 166 TETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAM-FKVGMFKIHP--EIPESLSAEAK 242 (268)
T ss_pred cccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhH-hhhhhhccCC--CCCcccCHHHH
Confidence 22334678999999976543 23345999999999999999999997654322111 1111111122 22344789999
Q ss_pred HHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 256 DLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 256 ~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
+++.+||+.+|.+|||+ .+++.|||+
T Consensus 243 ~li~~~l~~~p~~Rpt~--------~~ll~~~~~ 268 (268)
T cd06624 243 NFILRCFEPDPDKRASA--------HDLLQDPFL 268 (268)
T ss_pred HHHHHHcCCCchhCCCH--------HHHHhCCCC
Confidence 99999999999999988 566688885
No 243
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=4.8e-40 Score=279.19 Aligned_cols=250 Identities=20% Similarity=0.312 Sum_probs=202.4
Q ss_pred CCCCCeeEEeeeccCCeEEEEEEEEccC-----CcEEEEEEeecCC--cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCC
Q 022401 20 HDSDRYDFVRDIGSGNFGVARLMRDKVT-----KELVAVKYIERGD--KIDENVQREIINHRSLRHPNIVRFKEVILTPT 92 (298)
Q Consensus 20 ~~~~~y~~~~~lg~g~~~~vy~~~~~~~-----~~~~aiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 92 (298)
+..++|++.+.||+|+||.||.+..... +..+++|.+.... .....+.+|+.+++.++|||++++++++....
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~ 82 (277)
T cd05032 3 LPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQ 82 (277)
T ss_pred cchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCC
Confidence 4567999999999999999999998643 4789999976543 22346788999999999999999999999999
Q ss_pred eEEEEEeccCCCCHHHHHHhC----------CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEE
Q 022401 93 HLAIVMEYASGGELFERICNA----------GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKI 162 (298)
Q Consensus 93 ~~~lv~~~~~~~sL~~~l~~~----------~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l 162 (298)
..++|+||+++++|.+++... ..+++..+..++.|++.||.|||+.+++|+||+|+||+++.++. ++|
T Consensus 83 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~--~kl 160 (277)
T cd05032 83 PTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLT--VKI 160 (277)
T ss_pred CcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCC--EEE
Confidence 999999999999999998542 23677889999999999999999999999999999999998887 999
Q ss_pred eecCccccccCCC---CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHh
Q 022401 163 CDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRIL 238 (298)
Q Consensus 163 ~d~~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~ 238 (298)
+|||++....... ......++..|+|||.+.+..++.+ +||||||+++|++++ |..||....... ..+.+.
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~el~t~g~~p~~~~~~~~----~~~~~~ 235 (277)
T cd05032 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTK-SDVWSFGVVLWEMATLAEQPYQGLSNEE----VLKFVI 235 (277)
T ss_pred CCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcc-cchHHHHHHHHHhhccCCCCCccCCHHH----HHHHHh
Confidence 9999876433221 2223345678999999877776655 999999999999998 889997654322 222222
Q ss_pred hcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccch
Q 022401 239 SVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 239 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~ 277 (298)
.......+...+.++.+++.+||+.+|.+|||+.+++.
T Consensus 236 -~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 273 (277)
T cd05032 236 -DGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVS 273 (277)
T ss_pred -cCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 22223334457899999999999999999999988875
No 244
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.3e-40 Score=282.89 Aligned_cols=249 Identities=28% Similarity=0.404 Sum_probs=202.0
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC--cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEec
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD--KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY 100 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~ 100 (298)
+.|+..+.||+|++|.||++.+..++..+|+|.+.... ...+.+.+|+.++++++|||++++++++..+..+++|+||
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEc
Confidence 45788899999999999999998889999999887432 3345688999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC-CCCC
Q 022401 101 ASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-QPKS 179 (298)
Q Consensus 101 ~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~-~~~~ 179 (298)
+++++|.+.+.. ..+++..+..++.+++.|+.|||++|++|+||+|+||+++.++. ++|+|||++....... ....
T Consensus 84 ~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~--~~l~dfg~~~~~~~~~~~~~~ 160 (277)
T cd06642 84 LGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGD--VKLADFGVAGQLTDTQIKRNT 160 (277)
T ss_pred cCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCC--EEEccccccccccCcchhhhc
Confidence 999999988854 56899999999999999999999999999999999999998887 9999999886443322 1122
Q ss_pred CCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHH
Q 022401 180 TVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLIS 259 (298)
Q Consensus 180 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (298)
..++..|+|||++.+..++.+ +|+||||++++++++|..||......... ..+... .........+.++.+++.
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~-~Dv~slG~il~el~tg~~p~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~li~ 234 (277)
T cd06642 161 FVGTPFWMAPEVIKQSAYDFK-ADIWSLGITAIELAKGEPPNSDLHPMRVL----FLIPKN-SPPTLEGQYSKPFKEFVE 234 (277)
T ss_pred ccCcccccCHHHhCcCCCchh-hhHHHHHHHHHHHHhCCCCCcccchhhHH----hhhhcC-CCCCCCcccCHHHHHHHH
Confidence 346788999999987777655 99999999999999999998765432211 111111 111222346889999999
Q ss_pred HhhhhCCCCcccccccchhhh
Q 022401 260 RIFVADPAAVSIFFFPLNMSC 280 (298)
Q Consensus 260 ~~l~~dp~~Rps~~~~l~~~~ 280 (298)
+||+.+|.+||++.+++.+++
T Consensus 235 ~~l~~~p~~Rp~~~~il~~~~ 255 (277)
T cd06642 235 ACLNKDPRFRPTAKELLKHKF 255 (277)
T ss_pred HHccCCcccCcCHHHHHHhHH
Confidence 999999999999866665443
No 245
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=8e-40 Score=275.44 Aligned_cols=248 Identities=23% Similarity=0.348 Sum_probs=204.8
Q ss_pred CCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEe
Q 022401 20 HDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVME 99 (298)
Q Consensus 20 ~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~ 99 (298)
...++|++.+.||.|++|.||++... ++..+++|.+.........+.+|+.++++++|+|++++++++......++++|
T Consensus 3 ~~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 81 (261)
T cd05034 3 IPRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTE 81 (261)
T ss_pred cchhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEe
Confidence 45689999999999999999999976 45679999988766666789999999999999999999999998899999999
Q ss_pred ccCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC--
Q 022401 100 YASGGELFERICNAG--RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-- 175 (298)
Q Consensus 100 ~~~~~sL~~~l~~~~--~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~-- 175 (298)
++++++|.+++.... .++...+..++.+++.|+.|||++|++|+||+|+||++++++. ++|+|||++.......
T Consensus 82 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~--~~l~d~g~~~~~~~~~~~ 159 (261)
T cd05034 82 YMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLV--CKIADFGLARLIEDDEYT 159 (261)
T ss_pred ccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCC--EEECccccceeccchhhh
Confidence 999999999997643 6899999999999999999999999999999999999998877 9999999876443211
Q ss_pred CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHH
Q 022401 176 QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQEC 254 (298)
Q Consensus 176 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (298)
.......+..|+|||.+.+...+.+ +|+||+|++++++++ |..||....... ....+.. ....+.+...+.++
T Consensus 160 ~~~~~~~~~~y~~PE~~~~~~~~~~-~Di~slG~il~~l~t~g~~p~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~ 233 (261)
T cd05034 160 AREGAKFPIKWTAPEAANYGRFTIK-SDVWSFGILLTEIVTYGRVPYPGMTNRE----VLEQVER-GYRMPRPPNCPEEL 233 (261)
T ss_pred hhhccCCCccccCHHHhccCCcCch-hHHHHHHHHHHHHHhCCCCCCCCCCHHH----HHHHHHc-CCCCCCCCCCCHHH
Confidence 1112223467999999877766555 999999999999998 999997655432 2223222 22334444568999
Q ss_pred HHHHHHhhhhCCCCcccccccc
Q 022401 255 RDLISRIFVADPAAVSIFFFPL 276 (298)
Q Consensus 255 ~~li~~~l~~dp~~Rps~~~~l 276 (298)
.+++.+||+.||.+||++.++.
T Consensus 234 ~~~i~~~l~~~p~~Rp~~~~l~ 255 (261)
T cd05034 234 YDLMLQCWDKDPEERPTFEYLQ 255 (261)
T ss_pred HHHHHHHcccCcccCCCHHHHH
Confidence 9999999999999999997776
No 246
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=7.4e-40 Score=275.65 Aligned_cols=247 Identities=23% Similarity=0.382 Sum_probs=201.8
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEec
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY 100 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~ 100 (298)
..++|+++++||+|+||.||+|... +++.+++|.+.......+.+.+|+.++++++|+|++++++++. .+..++++|+
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~ 81 (260)
T cd05067 4 PRETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEY 81 (260)
T ss_pred chHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEc
Confidence 4578999999999999999999875 5678999998876666678899999999999999999999874 4578999999
Q ss_pred cCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCC--
Q 022401 101 ASGGELFERICNA--GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ-- 176 (298)
Q Consensus 101 ~~~~sL~~~l~~~--~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~-- 176 (298)
+.+++|.+.+... ..++..++..++.+++.||+|||+.|++|+||+|+||++++++. ++|+|||++........
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~--~~l~dfg~~~~~~~~~~~~ 159 (260)
T cd05067 82 MENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLC--CKIADFGLARLIEDNEYTA 159 (260)
T ss_pred CCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCC--EEEccCcceeecCCCCccc
Confidence 9999999988643 36888999999999999999999999999999999999998887 99999998764432111
Q ss_pred CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHH
Q 022401 177 PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECR 255 (298)
Q Consensus 177 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 255 (298)
.....++..|+|||.+....++.+ +||||||+++|++++ |..||...+..+. ...+ ......+.....+.++.
T Consensus 160 ~~~~~~~~~y~~pe~~~~~~~~~~-~Di~slG~~l~el~~~g~~p~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~ 233 (260)
T cd05067 160 REGAKFPIKWTAPEAINYGTFTIK-SDVWSFGILLTEIVTYGRIPYPGMTNPEV----IQNL-ERGYRMPRPDNCPEELY 233 (260)
T ss_pred ccCCcccccccCHHHhccCCcCcc-cchHHHHHHHHHHHhCCCCCCCCCChHHH----HHHH-HcCCCCCCCCCCCHHHH
Confidence 112234568999999877776655 999999999999998 9999987554222 2222 22233344455789999
Q ss_pred HHHHHhhhhCCCCcccccccch
Q 022401 256 DLISRIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 256 ~li~~~l~~dp~~Rps~~~~l~ 277 (298)
+++.+||+.||++|||+.++++
T Consensus 234 ~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 234 ELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred HHHHHHccCChhhCCCHHHHHH
Confidence 9999999999999999987774
No 247
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=4.2e-40 Score=276.67 Aligned_cols=242 Identities=26% Similarity=0.412 Sum_probs=202.8
Q ss_pred eeeccCCeEEEEEEEEccC---CcEEEEEEeecCCcc--hHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEeccCC
Q 022401 29 RDIGSGNFGVARLMRDKVT---KELVAVKYIERGDKI--DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASG 103 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~~~---~~~~aiK~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~~ 103 (298)
+.||+|+||.||.+..... +..+++|.+...... ...+.+|+..++.++|+|++++++++.....+++++||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 4789999999999999865 889999998765443 46788999999999999999999999999999999999999
Q ss_pred CCHHHHHHhC---------CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC
Q 022401 104 GELFERICNA---------GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH 174 (298)
Q Consensus 104 ~sL~~~l~~~---------~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~ 174 (298)
++|.+++... ..+++.+++.++.+++.|+.+||++|++|+||+|+||+++.++. ++|+|||.+......
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~--~~l~dfg~~~~~~~~ 158 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLV--VKISDFGLSRDVYDD 158 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCc--EEEcccccccccccc
Confidence 9999999875 77999999999999999999999999999999999999998877 999999998755433
Q ss_pred C---CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCC
Q 022401 175 S---QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPI 250 (298)
Q Consensus 175 ~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (298)
. ......++..|+|||.+....++.+ +||||+|+++|+|++ |..||....... ....+.. ......+..+
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~~l~~~g~~p~~~~~~~~----~~~~~~~-~~~~~~~~~~ 232 (262)
T cd00192 159 DYYRKKTGGKLPIRWMAPESLKDGIFTSK-SDVWSFGVLLWEIFTLGATPYPGLSNEE----VLEYLRK-GYRLPKPEYC 232 (262)
T ss_pred cccccccCCCcCccccCHHHhccCCcchh-hccHHHHHHHHHHHhcCCCCCCCCCHHH----HHHHHHc-CCCCCCCccC
Confidence 2 2233446778999999877766555 999999999999999 589998764322 2222222 3333445557
Q ss_pred CHHHHHHHHHhhhhCCCCcccccccchh
Q 022401 251 SQECRDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 251 ~~~l~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
+.++.+++.+||+.||.+|||+.+++++
T Consensus 233 ~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 233 PDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred ChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 8999999999999999999999888753
No 248
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=4.7e-40 Score=281.94 Aligned_cols=254 Identities=24% Similarity=0.355 Sum_probs=202.6
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccCC----------------cEEEEEEeecCC--cchHHHHHHHHHHhcCCCCCee
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVTK----------------ELVAVKYIERGD--KIDENVQREIINHRSLRHPNIV 82 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~----------------~~~aiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~ 82 (298)
..++|++++.||+|+||.||.+.+...+ ..+++|.+.... ...+.+.+|+.++++++|||++
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~ 82 (296)
T cd05051 3 PRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIA 82 (296)
T ss_pred chhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEe
Confidence 3478999999999999999999876533 457999887543 3346688899999999999999
Q ss_pred eeeEEEEeCCeEEEEEeccCCCCHHHHHHhCC-----------CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceE
Q 022401 83 RFKEVILTPTHLAIVMEYASGGELFERICNAG-----------RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTL 151 (298)
Q Consensus 83 ~~~~~~~~~~~~~lv~~~~~~~sL~~~l~~~~-----------~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nil 151 (298)
++++++..+...++++|++.+++|.+++.... .+++..++.++.|++.||+|||+.|++|+||+|+||+
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nil 162 (296)
T cd05051 83 RLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCL 162 (296)
T ss_pred EEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhcee
Confidence 99999999999999999999999999987665 6899999999999999999999999999999999999
Q ss_pred eeCCCCCCEEEeecCccccccCCC---CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh--CCCCCCCCCC
Q 022401 152 LDGSPAPRLKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV--GGYPFEDPDE 226 (298)
Q Consensus 152 v~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~--g~~pf~~~~~ 226 (298)
++.++. ++|+|||++....... ......++..|+|||.+.+..++.+ +||||||+++|++++ +..||.....
T Consensus 163 i~~~~~--~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Dv~slG~~l~el~~~~~~~p~~~~~~ 239 (296)
T cd05051 163 VGKNYT--IKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTK-SDVWAFGVTLWEILTLCREQPYEHLTD 239 (296)
T ss_pred ecCCCc--eEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCcc-chhhhhHHHHHHHHhcCCCCCCCCcCh
Confidence 998876 9999999886433221 1223345678999999877666655 999999999999998 6778876554
Q ss_pred chhHHHHHHHHh--hcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccch
Q 022401 227 PKDFRKTIQRIL--SVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 227 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~ 277 (298)
...+........ ......+.+...|.++.+++.+||+.||.+|||+.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 240 QQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred HHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence 333222221111 111122333446799999999999999999999988864
No 249
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.1e-39 Score=273.65 Aligned_cols=250 Identities=33% Similarity=0.549 Sum_probs=208.3
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC---cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEec
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD---KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY 100 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~ 100 (298)
+|++.+.||.|++|.||.+.+..++..+++|++.... .....+.+|++.++.++|+|++++.+.+......++++|+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 5899999999999999999998889999999987643 3445678899999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC-
Q 022401 101 ASGGELFERICNA----GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS- 175 (298)
Q Consensus 101 ~~~~sL~~~l~~~----~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~- 175 (298)
+++++|.+.+... ..++...+..++.+++.|+.+||+.|++|+||+|+||+++.++. ++|+|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~--~~l~d~~~~~~~~~~~~ 158 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGL--VKLGDFGISKVLSSTVD 158 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCc--EEECCccceeecccCcc
Confidence 9999999998764 67899999999999999999999999999999999999998776 9999999886443332
Q ss_pred CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHH
Q 022401 176 QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECR 255 (298)
Q Consensus 176 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 255 (298)
......+++.|+|||......++.+ +|+||+|++++++++|..||...+. ............ .+.+..++.++.
T Consensus 159 ~~~~~~~~~~y~~pe~~~~~~~~~~-~Dv~slG~~~~~l~~g~~p~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~ 232 (258)
T cd08215 159 LAKTVVGTPYYLSPELCQNKPYNYK-SDIWSLGCVLYELCTLKHPFEGENL----LELALKILKGQY-PPIPSQYSSELR 232 (258)
T ss_pred eecceeeeecccChhHhccCCCCcc-ccHHHHHHHHHHHHcCCCCCCCCcH----HHHHHHHhcCCC-CCCCCCCCHHHH
Confidence 2233457788999999877776655 9999999999999999999977553 222333322222 223335789999
Q ss_pred HHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 256 DLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 256 ~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
+++.+||+.+|.+|||+ .++++|||+
T Consensus 233 ~~i~~~l~~~p~~Rp~~--------~~ll~~~~~ 258 (258)
T cd08215 233 NLVSSLLQKDPEERPSI--------AQILQSPFI 258 (258)
T ss_pred HHHHHHcCCChhhCcCH--------HHHhcCCCC
Confidence 99999999999999988 555677875
No 250
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=7.4e-40 Score=278.48 Aligned_cols=249 Identities=20% Similarity=0.344 Sum_probs=199.9
Q ss_pred CCCCCeeEEeeeccCCeEEEEEEEEccCCc----EEEEEEeecCC--cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCe
Q 022401 20 HDSDRYDFVRDIGSGNFGVARLMRDKVTKE----LVAVKYIERGD--KIDENVQREIINHRSLRHPNIVRFKEVILTPTH 93 (298)
Q Consensus 20 ~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~----~~aiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 93 (298)
...++|++.+.||+|+||.||++.+..++. .||+|...... .....+.+|..+++.++|||++++++++... .
T Consensus 4 l~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~ 82 (279)
T cd05109 4 LKETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-T 82 (279)
T ss_pred cchhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-C
Confidence 345789999999999999999999876665 47999876432 2345678899999999999999999998654 5
Q ss_pred EEEEEeccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCcccccc
Q 022401 94 LAIVMEYASGGELFERICNA-GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 172 (298)
Q Consensus 94 ~~lv~~~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~ 172 (298)
.+++++++++++|.+.+... ..+++..+..++.|++.||.|||++|++|+||+|+||++++++. ++|+|||++....
T Consensus 83 ~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~--~kL~dfG~~~~~~ 160 (279)
T cd05109 83 VQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNH--VKITDFGLARLLD 160 (279)
T ss_pred cEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCc--EEECCCCceeecc
Confidence 67899999999999998764 46899999999999999999999999999999999999988777 9999999886443
Q ss_pred CCCCC---CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCC
Q 022401 173 LHSQP---KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTN 248 (298)
Q Consensus 173 ~~~~~---~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (298)
..... ....++..|+|||...+..++.+ +||||||+++||+++ |..||....... . ..........+...
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~-~Di~slG~~l~el~t~g~~p~~~~~~~~-~----~~~~~~~~~~~~~~ 234 (279)
T cd05109 161 IDETEYHADGGKVPIKWMALESILHRRFTHQ-SDVWSYGVTVWELMTFGAKPYDGIPARE-I----PDLLEKGERLPQPP 234 (279)
T ss_pred cccceeecCCCccchhhCCHHHhccCCCCch-hHHHHHHHHHHHHHcCCCCCCCCCCHHH-H----HHHHHCCCcCCCCc
Confidence 32211 12234567999999877777665 999999999999998 889987654322 1 12222222333444
Q ss_pred CCCHHHHHHHHHhhhhCCCCcccccccch
Q 022401 249 PISQECRDLISRIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 249 ~~~~~l~~li~~~l~~dp~~Rps~~~~l~ 277 (298)
..+.++.+++.+||+.||+.||++.+++.
T Consensus 235 ~~~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 235 ICTIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred cCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 57899999999999999999999999885
No 251
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.9e-41 Score=290.32 Aligned_cols=254 Identities=23% Similarity=0.304 Sum_probs=201.7
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcc-hHHHHHHHHHHhcCCCCCeeeeeEEEEeCC-eEEEEEe
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKI-DENVQREIINHRSLRHPNIVRFKEVILTPT-HLAIVME 99 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~~ 99 (298)
+++|.-...||+|+||.||++.-.. ++.+|||+....... ..+|.+|+.++.+++|||+++++|||.+.+ ..++|+|
T Consensus 74 T~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LVYE 152 (361)
T KOG1187|consen 74 TNNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLVYE 152 (361)
T ss_pred HhCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEEEE
Confidence 4677788899999999999999874 478999988765554 566999999999999999999999999988 5999999
Q ss_pred ccCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcC---cEEecCCCCceEeeCCCCCCEEEeecCccccccC-
Q 022401 100 YASGGELFERICNAG--RFSEDEARFFFQQLISGVSYCHAMQ---VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL- 173 (298)
Q Consensus 100 ~~~~~sL~~~l~~~~--~~~~~~~~~i~~~l~~~l~~Lh~~~---i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~- 173 (298)
|+..|||.+.+.... ++++.....|+.++++||+|||+.. |+|||||++|||+|.+.. .||+|||++.....
T Consensus 153 ym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~--aKlsDFGLa~~~~~~ 230 (361)
T KOG1187|consen 153 YMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFN--AKLSDFGLAKLGPEG 230 (361)
T ss_pred ccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCC--EEccCccCcccCCcc
Confidence 999999999997655 8899999999999999999999754 999999999999998888 99999999965544
Q ss_pred CCCCCCC-CCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCC--CchhHHHHHHHHhhc-CC----CCC
Q 022401 174 HSQPKST-VGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPD--EPKDFRKTIQRILSV-QY----SVP 245 (298)
Q Consensus 174 ~~~~~~~-~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~--~~~~~~~~~~~~~~~-~~----~~~ 245 (298)
....... .|+..|++||+......+.+ +||||||++++|+++|+.|..... ....+.......... .. +..
T Consensus 231 ~~~~~~~~~gt~gY~~PEy~~~g~lt~K-sDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~ 309 (361)
T KOG1187|consen 231 DTSVSTTVMGTFGYLAPEYASTGKLTEK-SDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPR 309 (361)
T ss_pred ccceeeecCCCCccCChhhhccCCcCcc-cccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCC
Confidence 3333333 88999999999988667666 999999999999999998877542 222223322222211 11 111
Q ss_pred CC-CCCC--H---HHHHHHHHhhhhCCCCcccccccchhh
Q 022401 246 DT-NPIS--Q---ECRDLISRIFVADPAAVSIFFFPLNMS 279 (298)
Q Consensus 246 ~~-~~~~--~---~l~~li~~~l~~dp~~Rps~~~~l~~~ 279 (298)
.. ...+ . .+..+..+|++.+|..||++.+++.+.
T Consensus 310 l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L 349 (361)
T KOG1187|consen 310 LKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKEL 349 (361)
T ss_pred ccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHH
Confidence 01 1233 2 366777889999999999999876544
No 252
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.1e-39 Score=281.37 Aligned_cols=251 Identities=27% Similarity=0.403 Sum_probs=200.0
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc----chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEE
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK----IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAI 96 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 96 (298)
....|++.+.||+|++|.||.+....+++.|++|.+..... ....+.+|+.+++.++|||++++.+++.++...++
T Consensus 13 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~l 92 (307)
T cd06607 13 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWL 92 (307)
T ss_pred cchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEE
Confidence 34679999999999999999999988899999998864322 23457889999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC
Q 022401 97 VMEYASGGELFERIC-NAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS 175 (298)
Q Consensus 97 v~~~~~~~sL~~~l~-~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~ 175 (298)
|+||+.+ ++.+.+. ....+++..+..++.|++.||.|||+.|++|+||+|.||+++.++. ++|+|||++......
T Consensus 93 v~e~~~g-~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~--~kL~dfg~~~~~~~~- 168 (307)
T cd06607 93 VMEYCLG-SASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGT--VKLADFGSASLVSPA- 168 (307)
T ss_pred EHHhhCC-CHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCC--EEEeecCcceecCCC-
Confidence 9999975 6666664 3456899999999999999999999999999999999999998887 999999987643322
Q ss_pred CCCCCCCCCcccCcccccc---ccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCH
Q 022401 176 QPKSTVGTPAYIAPEVLLR---HEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQ 252 (298)
Q Consensus 176 ~~~~~~~~~~~~aPE~~~~---~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (298)
....++..|+|||.+.+ ..++. ++||||+|+++|++++|..||...+.... ...+............++.
T Consensus 169 --~~~~~~~~y~aPE~~~~~~~~~~~~-~sDv~s~G~il~el~tg~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 241 (307)
T cd06607 169 --NSFVGTPYWMAPEVILAMDEGQYDG-KVDVWSLGITCIELAERKPPLFNMNAMSA----LYHIAQNDSPTLSSNDWSD 241 (307)
T ss_pred --CCccCCccccCceeeeccCCCCCCc-ccchHHHHHHHHHHHcCCCCCCCccHHHH----HHHHhcCCCCCCCchhhCH
Confidence 23456778999998742 33444 49999999999999999999976543221 1122222221122234688
Q ss_pred HHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhh
Q 022401 253 ECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMF 290 (298)
Q Consensus 253 ~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~ 290 (298)
++.+++.+||+.||.+||++.++ +.|||+.
T Consensus 242 ~~~~li~~~l~~~p~~Rp~~~~i--------l~~~~~~ 271 (307)
T cd06607 242 YFRNFVDSCLQKIPQDRPSSEEL--------LKHRFVL 271 (307)
T ss_pred HHHHHHHHHhcCChhhCcCHHHH--------hcChhhc
Confidence 99999999999999999988555 4677775
No 253
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=3.5e-40 Score=284.51 Aligned_cols=262 Identities=23% Similarity=0.340 Sum_probs=201.3
Q ss_pred CCCCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc---chHHHHHHHHHHhcCCCCCeeeeeEEEEeC--
Q 022401 17 PIMHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK---IDENVQREIINHRSLRHPNIVRFKEVILTP-- 91 (298)
Q Consensus 17 ~~~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-- 91 (298)
+++...++|++.+.||+|++|.||++.+..+++.+++|.+..... ....+.+|++++++++||||+++++++...
T Consensus 2 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (311)
T cd07866 2 YGCSKLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPD 81 (311)
T ss_pred CCCcccccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccc
Confidence 556668999999999999999999999998999999998865432 224567899999999999999999987543
Q ss_pred ------CeEEEEEeccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEee
Q 022401 92 ------THLAIVMEYASGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICD 164 (298)
Q Consensus 92 ------~~~~lv~~~~~~~sL~~~l~~-~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d 164 (298)
..+++|++|+.+ ++...+.. ...+++..++.++.|++.||+|||+.|++|+||+|+||++++++. ++|+|
T Consensus 82 ~~~~~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~--~~l~d 158 (311)
T cd07866 82 KSKRKRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGI--LKIAD 158 (311)
T ss_pred cccccCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCC--EEECc
Confidence 357999999965 56665543 457999999999999999999999999999999999999998887 99999
Q ss_pred cCccccccCCCCC------------CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHH
Q 022401 165 FGYSKSSVLHSQP------------KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRK 232 (298)
Q Consensus 165 ~~~~~~~~~~~~~------------~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~ 232 (298)
||++......... ....+++.|+|||.+.+......++||||+|+++|+|++|..||...+.......
T Consensus 159 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~ 238 (311)
T cd07866 159 FGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHL 238 (311)
T ss_pred CccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 9988643322211 1113467799999886655444559999999999999999999987665444333
Q ss_pred HHHHHhhcCC-------------------CCC-----CCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhh
Q 022401 233 TIQRILSVQY-------------------SVP-----DTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVW 288 (298)
Q Consensus 233 ~~~~~~~~~~-------------------~~~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~ 288 (298)
.......... ..+ .....++++.++|.+||+.||.+|||+ .++++|||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~--------~ell~~~~ 310 (311)
T cd07866 239 IFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTA--------SDALEHPY 310 (311)
T ss_pred HHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCH--------HHHhcCCC
Confidence 2222110000 000 001244789999999999999999987 66668888
Q ss_pred h
Q 022401 289 M 289 (298)
Q Consensus 289 ~ 289 (298)
+
T Consensus 311 f 311 (311)
T cd07866 311 F 311 (311)
T ss_pred C
Confidence 5
No 254
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=5.8e-40 Score=281.02 Aligned_cols=253 Identities=23% Similarity=0.345 Sum_probs=202.9
Q ss_pred CCCCCCeeEEeeeccCCeEEEEEEEEccC-----CcEEEEEEeecCC--cchHHHHHHHHHHhcC-CCCCeeeeeEEEEe
Q 022401 19 MHDSDRYDFVRDIGSGNFGVARLMRDKVT-----KELVAVKYIERGD--KIDENVQREIINHRSL-RHPNIVRFKEVILT 90 (298)
Q Consensus 19 ~~~~~~y~~~~~lg~g~~~~vy~~~~~~~-----~~~~aiK~~~~~~--~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~ 90 (298)
.+..++|++.+.||+|++|.||++.+... ...+++|.+.... .....+.+|+.+++++ +|+|++++++++..
T Consensus 8 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 87 (293)
T cd05053 8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ 87 (293)
T ss_pred ccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC
Confidence 34557999999999999999999997643 3689999887542 2234577899999999 79999999999999
Q ss_pred CCeEEEEEeccCCCCHHHHHHh----------------CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeC
Q 022401 91 PTHLAIVMEYASGGELFERICN----------------AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDG 154 (298)
Q Consensus 91 ~~~~~lv~~~~~~~sL~~~l~~----------------~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~ 154 (298)
++.+++++||+.+++|..++.. ...+++..++.++.|++.|++|||+.|++|+||+|+||+++.
T Consensus 88 ~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~ 167 (293)
T cd05053 88 EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTE 167 (293)
T ss_pred CCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcC
Confidence 9999999999999999999854 235889999999999999999999999999999999999998
Q ss_pred CCCCCEEEeecCccccccCCC---CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhH
Q 022401 155 SPAPRLKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDF 230 (298)
Q Consensus 155 ~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~ 230 (298)
++. ++|+|||++....... ......++..|+|||...+..++.+ +||||||+++|++++ |..||......+.
T Consensus 168 ~~~--~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~el~~~g~~p~~~~~~~~~- 243 (293)
T cd05053 168 DHV--MKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQ-SDVWSFGVLLWEIFTLGGSPYPGIPVEEL- 243 (293)
T ss_pred CCe--EEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcc-cceeehhhHHHHHhcCCCCCCCCCCHHHH-
Confidence 876 9999999886433221 1122234567999999877777665 999999999999997 8899976554222
Q ss_pred HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhh
Q 022401 231 RKTIQRILSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMS 279 (298)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~ 279 (298)
...+. .......+...+.++.+++.+||..||.+|||+.++++..
T Consensus 244 ---~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l 288 (293)
T cd05053 244 ---FKLLK-EGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDL 288 (293)
T ss_pred ---HHHHH-cCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHH
Confidence 22222 2222233445689999999999999999999999998643
No 255
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=3.5e-40 Score=287.93 Aligned_cols=258 Identities=28% Similarity=0.409 Sum_probs=201.9
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC---CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeC-----Ce
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG---DKIDENVQREIINHRSLRHPNIVRFKEVILTP-----TH 93 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~ 93 (298)
..+|++.+.||.|++|.||.+++..+++.|++|.+... ......+.+|+.+++.++|+|++++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 46899999999999999999999999999999988653 22334567899999999999999999987644 35
Q ss_pred EEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccC
Q 022401 94 LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 173 (298)
Q Consensus 94 ~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~ 173 (298)
.+++++|+. ++|.+.+....++++..+..++.|++.||.|||+.+++|+||+|+||+++.++. ++|+|||++.....
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~--~kL~Dfg~~~~~~~ 160 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCD--LKICDFGLARTTSE 160 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCC--EEECcCccccccCC
Confidence 899999995 689888888888999999999999999999999999999999999999998877 99999998874433
Q ss_pred C-CCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhc------------
Q 022401 174 H-SQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSV------------ 240 (298)
Q Consensus 174 ~-~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~------------ 240 (298)
. .......++..|+|||.+........++|+||||+++|+|++|..||...+......... ...+.
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 239 (337)
T cd07858 161 KGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLIT-ELLGSPSEEDLGFIRNE 239 (337)
T ss_pred CcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHH-HHhCCCChHHhhhcCch
Confidence 2 122233567789999988654334455999999999999999999997654322111111 10000
Q ss_pred -----------CCC---CCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 241 -----------QYS---VPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 241 -----------~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
... ......+++++.++|++||+.||++|||+ .++++|||+..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~--------~ell~h~~~~~ 296 (337)
T cd07858 240 KARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITV--------EEALAHPYLAS 296 (337)
T ss_pred hhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCH--------HHHHcCcchhh
Confidence 000 00123478899999999999999999987 55557777764
No 256
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=5.9e-40 Score=275.48 Aligned_cols=251 Identities=31% Similarity=0.522 Sum_probs=205.2
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC---CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEec
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG---DKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY 100 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~ 100 (298)
+|++.+.||.|++|.||++....++..+++|.+... ....+.+.+|+.+++.++|+|++++++.+......++++||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 589999999999999999999999999999998654 23345678999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCC-C
Q 022401 101 ASGGELFERICNAG--RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ-P 177 (298)
Q Consensus 101 ~~~~sL~~~l~~~~--~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~-~ 177 (298)
+.+++|.+.+.... .+++..+..++.+++.|+.|||+.+++|+||+|+||++++++. .++|+|||.+........ .
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~-~~~l~d~~~~~~~~~~~~~~ 159 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGM-VAKLGDFGIARQLNDSMELA 159 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCC-eEEecccccchhccCCcccc
Confidence 99999999886543 4789999999999999999999999999999999999987754 369999998864433222 1
Q ss_pred CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHH
Q 022401 178 KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDL 257 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (298)
....+++.|+|||...+..++.+ +|+||+|++++++++|..||...+.. +........... +.....+.++.++
T Consensus 160 ~~~~~~~~~~ape~~~~~~~~~~-~Dv~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~ 233 (257)
T cd08225 160 YTCVGTPYYLSPEICQNRPYNNK-TDIWSLGCVLYELCTLKHPFEGNNLH----QLVLKICQGYFA-PISPNFSRDLRSL 233 (257)
T ss_pred cccCCCccccCHHHHcCCCCCch-hhHHHHHHHHHHHHhCCCCCCCccHH----HHHHHHhcccCC-CCCCCCCHHHHHH
Confidence 23357788999999877776655 99999999999999999999765432 222233332222 2233478899999
Q ss_pred HHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 258 ISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 258 i~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
+.+||..+|++|||+ .+++.|||+
T Consensus 234 i~~~l~~~p~~Rpt~--------~~ll~~~~~ 257 (257)
T cd08225 234 ISQLFKVSPRDRPSI--------TSILKRPFL 257 (257)
T ss_pred HHHHhccChhhCcCH--------HHHhhCCCC
Confidence 999999999999987 555577775
No 257
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=7.4e-40 Score=278.55 Aligned_cols=253 Identities=27% Similarity=0.375 Sum_probs=196.8
Q ss_pred eeccCCeEEEEEEEEccCCcEEEEEEeecCCcc----hHHHHHHHHHHh---cCCCCCeeeeeEEEEeCCeEEEEEeccC
Q 022401 30 DIGSGNFGVARLMRDKVTKELVAVKYIERGDKI----DENVQREIINHR---SLRHPNIVRFKEVILTPTHLAIVMEYAS 102 (298)
Q Consensus 30 ~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~----~~~~~~e~~~l~---~l~h~~i~~~~~~~~~~~~~~lv~~~~~ 102 (298)
.||+|+||.||++.+..+++.+|+|.+...... ...+.++..+++ ...||+++.+.+++..++..++|+||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999999988999999988653211 122334443333 3479999999999999999999999999
Q ss_pred CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCCCCCCC
Q 022401 103 GGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVG 182 (298)
Q Consensus 103 ~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 182 (298)
+++|...+.....+++..+..++.|++.|++|||+.|++|+||+|+||+++.++. ++|+|||++...... ......+
T Consensus 81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~--~~l~dfg~~~~~~~~-~~~~~~~ 157 (279)
T cd05633 81 GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGH--VRISDLGLACDFSKK-KPHASVG 157 (279)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCC--EEEccCCcceecccc-CccCcCC
Confidence 9999999988888999999999999999999999999999999999999998887 999999988643322 2233457
Q ss_pred CCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhh
Q 022401 183 TPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIF 262 (298)
Q Consensus 183 ~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 262 (298)
+..|+|||.+.+......++|+||+|+++|++++|..||........ ........... ...+..+++++.++|.+||
T Consensus 158 ~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l 234 (279)
T cd05633 158 THGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMTLTVN--VELPDSFSPELKSLLEGLL 234 (279)
T ss_pred CcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH-HHHHHHhhcCC--cCCccccCHHHHHHHHHHh
Confidence 88999999986544334449999999999999999999976543221 12222222222 2233447899999999999
Q ss_pred hhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 263 VADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 263 ~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
..||.+||+.... +..++++|||+.+
T Consensus 235 ~~~p~~R~~~~~~---~~~~~~~h~~~~~ 260 (279)
T cd05633 235 QRDVSKRLGCLGR---GAQEVKEHVFFKG 260 (279)
T ss_pred cCCHHHhcCCCCC---CHHHHHhCccccC
Confidence 9999999963221 3467789999876
No 258
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=9.1e-40 Score=281.74 Aligned_cols=253 Identities=23% Similarity=0.314 Sum_probs=201.1
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEcc-------CCcEEEEEEeecCC--cchHHHHHHHHHHhcC-CCCCeeeeeEEEEe
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKV-------TKELVAVKYIERGD--KIDENVQREIINHRSL-RHPNIVRFKEVILT 90 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~-------~~~~~aiK~~~~~~--~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~ 90 (298)
..++|.+.+.||+|+||.||.+++.. ++..+|+|.+.... .....+.+|+.+++.+ +|||++++++++..
T Consensus 16 ~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (307)
T cd05098 16 PRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 95 (307)
T ss_pred ehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec
Confidence 34799999999999999999998643 23469999887542 2334577899999999 79999999999999
Q ss_pred CCeEEEEEeccCCCCHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeC
Q 022401 91 PTHLAIVMEYASGGELFERICNAG----------------RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDG 154 (298)
Q Consensus 91 ~~~~~lv~~~~~~~sL~~~l~~~~----------------~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~ 154 (298)
....++|+||+++++|.+++.... .++..+++.++.|++.||+|||+.|++|+||+|+||+++.
T Consensus 96 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~ 175 (307)
T cd05098 96 DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE 175 (307)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcC
Confidence 999999999999999999996532 3788899999999999999999999999999999999998
Q ss_pred CCCCCEEEeecCccccccCCCC---CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhH
Q 022401 155 SPAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDF 230 (298)
Q Consensus 155 ~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~ 230 (298)
++. ++|+|||.+........ .....++..|+|||.+.+..++.+ +|+||||+++|+|++ |..||...+. +
T Consensus 176 ~~~--~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~DvwslG~~l~el~~~g~~p~~~~~~-~-- 249 (307)
T cd05098 176 DNV--MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQ-SDVWSFGVLLWEIFTLGGSPYPGVPV-E-- 249 (307)
T ss_pred CCc--EEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcH-HHHHHHHHHHHHHHcCCCCCCCcCCH-H--
Confidence 876 99999998764432111 112223467999999877776655 999999999999998 7888866442 2
Q ss_pred HHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhH
Q 022401 231 RKTIQRILSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCL 281 (298)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~ 281 (298)
+....+ ........+...+.++.+++.+||..+|.+|||+.++++....
T Consensus 250 -~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~ 298 (307)
T cd05098 250 -ELFKLL-KEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 298 (307)
T ss_pred -HHHHHH-HcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHH
Confidence 222222 2222333344578999999999999999999999999875543
No 259
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=6.9e-40 Score=275.80 Aligned_cols=248 Identities=23% Similarity=0.371 Sum_probs=200.4
Q ss_pred CCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEe
Q 022401 20 HDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVME 99 (298)
Q Consensus 20 ~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~ 99 (298)
...++|++.+.||+|++|.||.+... .+..+++|.+.......+.+.+|+.++++++|+|++++++++. ....+++++
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e 80 (260)
T cd05070 3 IPRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTE 80 (260)
T ss_pred CchHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEE
Confidence 45578999999999999999999876 4556999998776555678899999999999999999999875 456789999
Q ss_pred ccCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCC
Q 022401 100 YASGGELFERICNA--GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP 177 (298)
Q Consensus 100 ~~~~~sL~~~l~~~--~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~ 177 (298)
++++++|.+++... ..++...++.++.+++.|+.|||+.|++|+||+|+||++++++. ++|+|||++.........
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~--~~l~dfg~~~~~~~~~~~ 158 (260)
T cd05070 81 YMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLV--CKIADFGLARLIEDNEYT 158 (260)
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCce--EEeCCceeeeeccCcccc
Confidence 99999999998653 35899999999999999999999999999999999999998876 999999998643322111
Q ss_pred --CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHH
Q 022401 178 --KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQEC 254 (298)
Q Consensus 178 --~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (298)
....++..|+|||.+.+..++.+ +|+||||+++|++++ |..||...+..+ ....+.. ....+.+...+.++
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~~l~~l~~~g~~p~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~ 232 (260)
T cd05070 159 ARQGAKFPIKWTAPEAALYGRFTIK-SDVWSFGILLTELVTKGRVPYPGMNNRE----VLEQVER-GYRMPCPQDCPISL 232 (260)
T ss_pred cccCCCCCccccChHHHhcCCCcch-hhhHHHHHHHHHHHhcCCCCCCCCCHHH----HHHHHHc-CCCCCCCCcCCHHH
Confidence 12234457999999877776655 999999999999999 888997654322 2222222 22333444578999
Q ss_pred HHHHHHhhhhCCCCcccccccch
Q 022401 255 RDLISRIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 255 ~~li~~~l~~dp~~Rps~~~~l~ 277 (298)
.+++.+||+.||.+|||+.++.+
T Consensus 233 ~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 233 HELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred HHHHHHHcccCcccCcCHHHHHH
Confidence 99999999999999999976663
No 260
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=8.2e-40 Score=279.92 Aligned_cols=258 Identities=24% Similarity=0.318 Sum_probs=206.6
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEc-----cCCcEEEEEEeecCCcc-hHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEE
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDK-----VTKELVAVKYIERGDKI-DENVQREIINHRSLRHPNIVRFKEVILTPTHLA 95 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~-----~~~~~~aiK~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 95 (298)
..+|.+.+.||+|++|.||.+++. .++..+++|.+...... ...+.+|+.++++++|+||+++++++......+
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (291)
T cd05094 4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLI 83 (291)
T ss_pred hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceE
Confidence 467999999999999999999864 24556888887654332 356889999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCC
Q 022401 96 IVMEYASGGELFERICNAG----------------RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPR 159 (298)
Q Consensus 96 lv~~~~~~~sL~~~l~~~~----------------~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~ 159 (298)
+|+||+++++|.+++.... .+++..++.++.+++.|++|||++|++|+||+|+||+++.++.
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~-- 161 (291)
T cd05094 84 MVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLL-- 161 (291)
T ss_pred EEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCc--
Confidence 9999999999999986542 3788999999999999999999999999999999999998886
Q ss_pred EEEeecCccccccCCC---CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHH
Q 022401 160 LKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQ 235 (298)
Q Consensus 160 ~~l~d~~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~ 235 (298)
++|+|||++....... ......++..|+|||.+.+..++.+ +||||||+++|+|++ |..||......+ ...
T Consensus 162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~el~t~g~~p~~~~~~~~----~~~ 236 (291)
T cd05094 162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTE-SDVWSFGVILWEIFTYGKQPWFQLSNTE----VIE 236 (291)
T ss_pred EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCch-hhHHHHHHHHHHHHhCCCCCCCCCCHHH----HHH
Confidence 9999999886433221 1223345678999999887777665 999999999999998 999987765432 223
Q ss_pred HHhhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhh
Q 022401 236 RILSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFV 287 (298)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp 287 (298)
.+..+... ......|.++.+++.+||+.||.+|||+.+++++.....-..|
T Consensus 237 ~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~~~ 287 (291)
T cd05094 237 CITQGRVL-ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKATP 287 (291)
T ss_pred HHhCCCCC-CCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhhcC
Confidence 33332222 2233468999999999999999999999999976655544443
No 261
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=5.7e-40 Score=277.70 Aligned_cols=250 Identities=23% Similarity=0.384 Sum_probs=202.5
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccCCc---EEEEEEeecC--CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEE
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVTKE---LVAVKYIERG--DKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLA 95 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~---~~aiK~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 95 (298)
+.++|++.+.||+|+||.||++....+++ .|++|.+... ......+..|+.++++++|||++++.+++..+...+
T Consensus 2 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 81 (269)
T cd05065 2 DVSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVM 81 (269)
T ss_pred ChHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceE
Confidence 45679999999999999999999876554 6999988653 233457889999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC
Q 022401 96 IVMEYASGGELFERICNA-GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH 174 (298)
Q Consensus 96 lv~~~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~ 174 (298)
+|+||+++++|.+++... +.++..++..++.|++.|++|||++|++|+||+|+||+++.++. ++|+|||++......
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~--~kl~dfg~~~~~~~~ 159 (269)
T cd05065 82 IITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLV--CKVSDFGLSRFLEDD 159 (269)
T ss_pred EEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCc--EEECCCccccccccC
Confidence 999999999999998653 46899999999999999999999999999999999999987776 999999987533222
Q ss_pred CCCCC---CC---CCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCC
Q 022401 175 SQPKS---TV---GTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDT 247 (298)
Q Consensus 175 ~~~~~---~~---~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (298)
..... .. .+..|+|||.+.+..++.+ +||||+|+++|++++ |..||......+ ....+ ......+..
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~-~DvwslG~~l~e~l~~g~~p~~~~~~~~----~~~~i-~~~~~~~~~ 233 (269)
T cd05065 160 TSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSA-SDVWSYGIVMWEVMSYGERPYWDMSNQD----VINAI-EQDYRLPPP 233 (269)
T ss_pred ccccccccccCCCcceeecCHhHhccCcccch-hhhhhhHHHHHHHhcCCCCCCCCCCHHH----HHHHH-HcCCcCCCc
Confidence 11111 11 1346999999877777665 999999999999886 999998755422 22222 223344445
Q ss_pred CCCCHHHHHHHHHhhhhCCCCcccccccchh
Q 022401 248 NPISQECRDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 248 ~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
..+|.++.+++.+||+.+|.+||++.+++..
T Consensus 234 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 264 (269)
T cd05065 234 MDCPTALHQLMLDCWQKDRNARPKFGQIVST 264 (269)
T ss_pred ccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 5678999999999999999999999888753
No 262
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=9e-40 Score=274.70 Aligned_cols=239 Identities=26% Similarity=0.329 Sum_probs=192.4
Q ss_pred eeccCCeEEEEEEEE--ccCCcEEEEEEeecCCc---chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEeccCCC
Q 022401 30 DIGSGNFGVARLMRD--KVTKELVAVKYIERGDK---IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGG 104 (298)
Q Consensus 30 ~lg~g~~~~vy~~~~--~~~~~~~aiK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~~~ 104 (298)
.||+|+||.||++.+ ..++..+++|++..... ..+.+.+|+.+++.++||||+++++++. ....++|+|+++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 689999999999965 45678899998765432 3456788999999999999999999875 45678999999999
Q ss_pred CHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCC----CCC
Q 022401 105 ELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP----KST 180 (298)
Q Consensus 105 sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~----~~~ 180 (298)
+|.+++.....+++..+..++.|++.|+++||++|++|+||+|.||+++.++. ++|+|||++......... ...
T Consensus 81 ~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~--~kl~Dfg~~~~~~~~~~~~~~~~~~ 158 (257)
T cd05116 81 PLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHY--AKISDFGLSKALGADENYYKAKTHG 158 (257)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCe--EEECCCccccccCCCCCeeeecCCC
Confidence 99999988788999999999999999999999999999999999999998776 999999988644332211 122
Q ss_pred CCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHH
Q 022401 181 VGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLIS 259 (298)
Q Consensus 181 ~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (298)
.++..|+|||.+....++.+ +|+||||+++|++++ |..||...... .....+.... ..+.+..+++++.++|.
T Consensus 159 ~~~~~y~aPE~~~~~~~~~~-~Di~slG~~l~el~t~g~~p~~~~~~~----~~~~~i~~~~-~~~~~~~~~~~l~~li~ 232 (257)
T cd05116 159 KWPVKWYAPECMNYYKFSSK-SDVWSFGVLMWEAFSYGQKPYKGMKGN----EVTQMIESGE-RMECPQRCPPEMYDLMK 232 (257)
T ss_pred CCCccccCHhHhccCCcCch-hHHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHHHHCCC-CCCCCCCCCHHHHHHHH
Confidence 23468999998876666555 999999999999998 99999875442 2222232222 23344458999999999
Q ss_pred HhhhhCCCCcccccccch
Q 022401 260 RIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 260 ~~l~~dp~~Rps~~~~l~ 277 (298)
+||+.||++||++.+|..
T Consensus 233 ~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 233 LCWTYGVDERPGFAVVEL 250 (257)
T ss_pred HHhccCchhCcCHHHHHH
Confidence 999999999999977764
No 263
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-42 Score=302.28 Aligned_cols=258 Identities=27% Similarity=0.415 Sum_probs=218.9
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeec-CCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEecc
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIER-GDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYA 101 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~ 101 (298)
+-|.|+..||.|+||.||+|.++.++-..|-|++.. +....+.+.-|+.||....||+|+++++.|..++.++++.|||
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC 111 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFC 111 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeec
Confidence 569999999999999999999999998999998875 3445678889999999999999999999999999999999999
Q ss_pred CCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccc-cccCCCCCCC
Q 022401 102 SGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK-SSVLHSQPKS 179 (298)
Q Consensus 102 ~~~sL~~~l~~-~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~-~~~~~~~~~~ 179 (298)
.||-....+-. +..+++.++..+.++++.||.|||+++|+|||||..|||++.+|. ++|.|||.+. ..........
T Consensus 112 ~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGd--irLADFGVSAKn~~t~qkRDs 189 (1187)
T KOG0579|consen 112 GGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGD--IRLADFGVSAKNKSTRQKRDS 189 (1187)
T ss_pred CCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCc--EeeecccccccchhHHhhhcc
Confidence 99999887654 447999999999999999999999999999999999999999998 9999999764 2333334466
Q ss_pred CCCCCcccCccccc-----cccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHH
Q 022401 180 TVGTPAYIAPEVLL-----RHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQEC 254 (298)
Q Consensus 180 ~~~~~~~~aPE~~~-----~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (298)
..|+|+|||||+.. ..+|+++ +||||||+.+.+|..+.+|....+.- .-+++---+.++.+..+..++.++
T Consensus 190 FIGTPYWMAPEVvmCET~KD~PYDyk-aDiWSlGITLIEMAqiEPPHhelnpM---RVllKiaKSePPTLlqPS~Ws~~F 265 (1187)
T KOG0579|consen 190 FIGTPYWMAPEVVMCETFKDQPYDYK-ADIWSLGITLIEMAQIEPPHHELNPM---RVLLKIAKSEPPTLLQPSHWSRSF 265 (1187)
T ss_pred ccCCcccccchheeeccccCCCchhh-hhHHhhhhHHHHHhccCCCccccchH---HHHHHHhhcCCCcccCcchhhhHH
Confidence 78999999999854 3466676 99999999999999999998876542 222222234555677788899999
Q ss_pred HHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhhhh
Q 022401 255 RDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDATE 294 (298)
Q Consensus 255 ~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~~~ 294 (298)
.+|+..||.+||..||++ .++|.|||+++.+-
T Consensus 266 ~DfLk~cL~Knp~~Rp~a--------aqll~Hpfv~~~~S 297 (1187)
T KOG0579|consen 266 SDFLKRCLVKNPRNRPPA--------AQLLKHPFVQNAPS 297 (1187)
T ss_pred HHHHHHHHhcCCccCCCH--------HHHhhCcccccCCc
Confidence 999999999999999977 67779999996543
No 264
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.7e-40 Score=281.74 Aligned_cols=249 Identities=20% Similarity=0.320 Sum_probs=201.2
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEcc-----CCcEEEEEEeecCCc--chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCe
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKV-----TKELVAVKYIERGDK--IDENVQREIINHRSLRHPNIVRFKEVILTPTH 93 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~-----~~~~~aiK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 93 (298)
...+|++.+.||+|+||.||++.... .+..+|+|++..... ..+.+.+|+.++..++||||+++++++.....
T Consensus 3 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~ 82 (283)
T cd05091 3 NLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQP 82 (283)
T ss_pred CHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCc
Confidence 45679999999999999999998753 357899999875432 23567889999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCC
Q 022401 94 LAIVMEYASGGELFERICNA----------------GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPA 157 (298)
Q Consensus 94 ~~lv~~~~~~~sL~~~l~~~----------------~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~ 157 (298)
.+++++|+.+++|.+++... ..++...+..++.|++.||+|||+.|++|+||||+||++++++.
T Consensus 83 ~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 83 LSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLN 162 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCc
Confidence 99999999999999988532 24788889999999999999999999999999999999998776
Q ss_pred CCEEEeecCccccccCCCC---CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHH
Q 022401 158 PRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKT 233 (298)
Q Consensus 158 ~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~ 233 (298)
++|+|||++........ .....+++.|+|||.+.+..++.+ +||||||+++|+|++ |..||...... ..
T Consensus 163 --~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Dv~slG~~l~el~~~g~~p~~~~~~~----~~ 235 (283)
T cd05091 163 --VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSID-SDIWSYGVVLWEVFSYGLQPYCGYSNQ----DV 235 (283)
T ss_pred --eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcc-hhHHHHHHHHHHHHcCCCCCCCCCCHH----HH
Confidence 99999998764322211 123335678999999877777665 999999999999998 77888765442 22
Q ss_pred HHHHhhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccch
Q 022401 234 IQRILSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~ 277 (298)
...+..... .+.+..+++++.+++.+||+.+|.+||++.+++.
T Consensus 236 ~~~i~~~~~-~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~ 278 (283)
T cd05091 236 IEMIRNRQV-LPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHS 278 (283)
T ss_pred HHHHHcCCc-CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 333333332 2334558999999999999999999999988875
No 265
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=1e-39 Score=278.37 Aligned_cols=254 Identities=29% Similarity=0.447 Sum_probs=202.2
Q ss_pred eeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC---cchHHHHHHHHHHhcCCCCCeeeeeEEEEeC--CeEEEEEe
Q 022401 25 YDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD---KIDENVQREIINHRSLRHPNIVRFKEVILTP--THLAIVME 99 (298)
Q Consensus 25 y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~~ 99 (298)
|++.+.||+|++|.||++.+..+++.+++|.+.... .....+.+|+.++++++|+|++++++++.+. ...++|++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 789999999999999999999889999999998653 3335677899999999999999999999888 89999999
Q ss_pred ccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCC--
Q 022401 100 YASGGELFERICNA-GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ-- 176 (298)
Q Consensus 100 ~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~-- 176 (298)
|+++ +|.+++... ..+++..++.++.+++.|+++||+.|++|+||+|+||++++++. ++|+|||++........
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~--~~l~d~g~~~~~~~~~~~~ 157 (287)
T cd07840 81 YMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGV--LKLADFGLARPYTKRNSAD 157 (287)
T ss_pred cccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCC--EEEccccceeeccCCCccc
Confidence 9975 888888665 57899999999999999999999999999999999999998887 99999998864443321
Q ss_pred CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCC-CCCC---------
Q 022401 177 PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQY-SVPD--------- 246 (298)
Q Consensus 177 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~--------- 246 (298)
.....++..|+|||.+.+....+.++||||||++++++++|..||...+................. .++.
T Consensus 158 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (287)
T cd07840 158 YTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFEN 237 (287)
T ss_pred ccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhh
Confidence 223345678999998766544455599999999999999999999876654443333222111000 0000
Q ss_pred --------------CCC-CCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 247 --------------TNP-ISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 247 --------------~~~-~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
... ++.++.+++++||+.||.+||++ .++++|||+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~--------~~~l~~~~~ 287 (287)
T cd07840 238 LKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISA--------DQALQHEYF 287 (287)
T ss_pred ccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCH--------HHHhhCcCC
Confidence 011 37899999999999999999987 555577775
No 266
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1.1e-39 Score=278.37 Aligned_cols=252 Identities=29% Similarity=0.472 Sum_probs=205.9
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc-chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEeccC
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYAS 102 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~ 102 (298)
.|...+.||+|++|.||.+.+..+++.+++|.+..... ..+.+.+|+.++++++|||++++++++...+..+++++++.
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~ 99 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE 99 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccC
Confidence 57778899999999999999988899999998865432 23457889999999999999999999999999999999999
Q ss_pred CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC-CCCCCC
Q 022401 103 GGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-QPKSTV 181 (298)
Q Consensus 103 ~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~ 181 (298)
+++|.+.+.. .+++..++..++.+++.++++||+.|++|+||+|+||+++.++. ++|+|||.+....... ......
T Consensus 100 ~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~--~~l~d~g~~~~~~~~~~~~~~~~ 176 (285)
T cd06648 100 GGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGR--VKLSDFGFCAQVSKEVPRRKSLV 176 (285)
T ss_pred CCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCc--EEEcccccchhhccCCccccccc
Confidence 9999998876 67899999999999999999999999999999999999998887 9999999875433222 222345
Q ss_pred CCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCC-CCCCCCCCCHHHHHHHHH
Q 022401 182 GTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQY-SVPDTNPISQECRDLISR 260 (298)
Q Consensus 182 ~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~ 260 (298)
+++.|+|||.+.+..++.+ +|+||+|++++++++|..||...+.. .....+..... .......++.++.+++.+
T Consensus 177 ~~~~y~aPE~~~~~~~~~~-~Dv~slGv~l~ell~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 251 (285)
T cd06648 177 GTPYWMAPEVISRLPYGTE-VDIWSLGIMVIEMVDGEPPYFNEPPL----QAMKRIRDNLPPKLKNLHKVSPRLRSFLDR 251 (285)
T ss_pred CCccccCHHHhcCCCCCCc-ccHHHHHHHHHHHHhCCCCCcCCCHH----HHHHHHHhcCCCCCcccccCCHHHHHHHHH
Confidence 7888999999877777665 99999999999999999999765432 22223333222 222233478999999999
Q ss_pred hhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 261 IFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 261 ~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
||+.||.+|||+. ++++|||+..
T Consensus 252 ~l~~~p~~Rpt~~--------~il~~~~~~~ 274 (285)
T cd06648 252 MLVRDPAQRATAA--------ELLNHPFLAK 274 (285)
T ss_pred HcccChhhCcCHH--------HHccCccccc
Confidence 9999999999874 5557788754
No 267
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.6e-39 Score=278.01 Aligned_cols=262 Identities=26% Similarity=0.439 Sum_probs=211.1
Q ss_pred CeeEEeeeccCCeEEEEEEEEc---cCCcEEEEEEeecC-----CcchHHHHHHHHHHhcC-CCCCeeeeeEEEEeCCeE
Q 022401 24 RYDFVRDIGSGNFGVARLMRDK---VTKELVAVKYIERG-----DKIDENVQREIINHRSL-RHPNIVRFKEVILTPTHL 94 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~---~~~~~~aiK~~~~~-----~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 94 (298)
.|++.+.||.|+||.||.+++. .+|..||+|++... ....+.+.+|+.+++++ +|+||+++++++..+..+
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 4899999999999999999875 47889999998753 22345678899999999 589999999999999999
Q ss_pred EEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC
Q 022401 95 AIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH 174 (298)
Q Consensus 95 ~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~ 174 (298)
++|+||+++++|.+.+.....+++..+..++.|++.||.+||+.|++|+||+|+||+++.++. ++|+|||++......
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~--~kl~dfg~~~~~~~~ 158 (290)
T cd05613 81 HLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGH--VVLTDFGLSKEFHED 158 (290)
T ss_pred EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCC--EEEeeCccceecccc
Confidence 999999999999999988888999999999999999999999999999999999999998876 999999988644332
Q ss_pred C--CCCCCCCCCcccCcccccccc-CCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCC
Q 022401 175 S--QPKSTVGTPAYIAPEVLLRHE-YDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPIS 251 (298)
Q Consensus 175 ~--~~~~~~~~~~~~aPE~~~~~~-~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (298)
. ......++..|+|||.+.... ....++||||+|+++|++++|..||...............+....... +..++
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 236 (290)
T cd05613 159 EVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPY--PQEMS 236 (290)
T ss_pred cccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCCC--CccCC
Confidence 1 112344778899999986532 223449999999999999999999976544334444444444433333 33478
Q ss_pred HHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 252 QECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 252 ~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
..+.+++++||+.||.+||+.. ...+..++.|||++..
T Consensus 237 ~~~~~ll~~~l~~~p~~R~~~~---~~~~~~l~~~~~~~~~ 274 (290)
T cd05613 237 ALAKDIIQRLLMKDPKKRLGCG---PSDADEIKKHPFFQKI 274 (290)
T ss_pred HHHHHHHHHHhcCCHHHhcCCC---CCCHHHHHcCcccccC
Confidence 9999999999999999998542 2245788899998754
No 268
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=7.8e-40 Score=279.61 Aligned_cols=261 Identities=28% Similarity=0.450 Sum_probs=209.5
Q ss_pred CeeEEeeeccCCeEEEEEEEEc---cCCcEEEEEEeecC-----CcchHHHHHHHHHHhcC-CCCCeeeeeEEEEeCCeE
Q 022401 24 RYDFVRDIGSGNFGVARLMRDK---VTKELVAVKYIERG-----DKIDENVQREIINHRSL-RHPNIVRFKEVILTPTHL 94 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~---~~~~~~aiK~~~~~-----~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 94 (298)
+|++.+.||+|++|.||.++.. .+++.+++|++... ......+.+|+.++.++ +|||++++++.+..+..+
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 4899999999999999999864 45788999988753 22335577899999999 599999999999999999
Q ss_pred EEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC
Q 022401 95 AIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH 174 (298)
Q Consensus 95 ~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~ 174 (298)
++|+||+++++|.+.+.....+++..++.++.|++.+|.+||+.|++|+||+|.||+++.++. ++|+|||++......
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~--~~l~dfg~~~~~~~~ 158 (288)
T cd05583 81 HLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGH--VVLTDFGLSKEFLAE 158 (288)
T ss_pred EEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCC--EEEEECccccccccc
Confidence 999999999999999987778999999999999999999999999999999999999998876 999999987644332
Q ss_pred CC--CCCCCCCCcccCcccccccc-CCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCC
Q 022401 175 SQ--PKSTVGTPAYIAPEVLLRHE-YDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPIS 251 (298)
Q Consensus 175 ~~--~~~~~~~~~~~aPE~~~~~~-~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (298)
.. .....++..|++||.+.+.. ....++|+||+|+++++|++|..||.............+.+....... +...+
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 236 (288)
T cd05583 159 EEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPPF--PKTMS 236 (288)
T ss_pred cccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccCCCC--CcccC
Confidence 21 12234678899999976654 223449999999999999999999975443333334444444443332 33478
Q ss_pred HHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhhh
Q 022401 252 QECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDAT 293 (298)
Q Consensus 252 ~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~~ 293 (298)
.++.+++.+||+.||++|||+.+ ...+++|||+....
T Consensus 237 ~~l~~li~~~l~~~p~~R~t~~~-----~~~~l~~~~~~~~~ 273 (288)
T cd05583 237 AEARDFIQKLLEKDPKKRLGANG-----ADEIKNHPFFQGID 273 (288)
T ss_pred HHHHHHHHHHhcCCHhhccCcch-----HHHHhcCcccccCC
Confidence 99999999999999999999753 34678999987643
No 269
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.2e-39 Score=273.76 Aligned_cols=246 Identities=25% Similarity=0.379 Sum_probs=199.7
Q ss_pred CCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCeeeeeEEEE-eCCeEEEE
Q 022401 19 MHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVIL-TPTHLAIV 97 (298)
Q Consensus 19 ~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv 97 (298)
..+..+|++.+.||+|++|.||++... +..+++|...... ..+.+.+|+.++++++|+|++++++++. .++..+++
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv 78 (256)
T cd05082 2 ALNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 78 (256)
T ss_pred CccHHhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCCc-hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEE
Confidence 345678999999999999999999775 6779999876543 3467889999999999999999999765 45678999
Q ss_pred EeccCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC
Q 022401 98 MEYASGGELFERICNAG--RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS 175 (298)
Q Consensus 98 ~~~~~~~sL~~~l~~~~--~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~ 175 (298)
+||+++++|.+++.... .+++..++.++.+++.||+|||++|++|+||+|+||+++.++. ++|+|||++.......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~--~kl~dfg~~~~~~~~~ 156 (256)
T cd05082 79 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNV--AKVSDFGLTKEASSTQ 156 (256)
T ss_pred EECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCc--EEecCCccceeccccC
Confidence 99999999999987644 3788999999999999999999999999999999999998887 9999999876433222
Q ss_pred CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHH
Q 022401 176 QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQEC 254 (298)
Q Consensus 176 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (298)
.....+..|+|||...+..++.+ +||||||+++|+|++ |..||...+. ......+... ........++..+
T Consensus 157 --~~~~~~~~y~aPE~~~~~~~~~~-~Dv~slG~i~~~l~~~g~~p~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~ 228 (256)
T cd05082 157 --DTGKLPVKWTAPEALREKKFSTK-SDVWSFGILLWEIYSFGRVPYPRIPL----KDVVPRVEKG-YKMDAPDGCPPVV 228 (256)
T ss_pred --CCCccceeecCHHHHccCCCCch-hhhHHHHHHHHHHHhCCCCCCCCCCH----HHHHHHHhcC-CCCCCCCCCCHHH
Confidence 23344567999999877776655 999999999999997 8999876443 2223333222 2223344578999
Q ss_pred HHHHHHhhhhCCCCcccccccch
Q 022401 255 RDLISRIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 255 ~~li~~~l~~dp~~Rps~~~~l~ 277 (298)
.+++.+||+.||.+|||+.++++
T Consensus 229 ~~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 229 YDVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred HHHHHHHhcCChhhCcCHHHHHH
Confidence 99999999999999999988875
No 270
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=2.5e-40 Score=282.61 Aligned_cols=255 Identities=23% Similarity=0.343 Sum_probs=200.3
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC--cchHHHHHHHHHHhcCC-CCCeeeeeEEEEeCCeEEEEE
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD--KIDENVQREIINHRSLR-HPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 98 (298)
.++|+..+.||+|+||.||.+.+..+++.+|+|.+.... .....+.+|+.++.++. |+||+++++++..+...++++
T Consensus 3 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~ 82 (288)
T cd06616 3 AEDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICM 82 (288)
T ss_pred HHHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEE
Confidence 357888899999999999999999999999999987543 23456778999999996 999999999999999999999
Q ss_pred eccCCCCHHHHH-----HhCCCCCHHHHHHHHHHHHHHHHHHhhc-CcEEecCCCCceEeeCCCCCCEEEeecCcccccc
Q 022401 99 EYASGGELFERI-----CNAGRFSEDEARFFFQQLISGVSYCHAM-QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 172 (298)
Q Consensus 99 ~~~~~~sL~~~l-----~~~~~~~~~~~~~i~~~l~~~l~~Lh~~-~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~ 172 (298)
+++.. ++.++. .....+++..+..++.+++.|++|||+. +++|+||+|+||+++.++. ++|+|||++....
T Consensus 83 e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~--~kl~dfg~~~~~~ 159 (288)
T cd06616 83 ELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGN--IKLCDFGISGQLV 159 (288)
T ss_pred ecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCc--EEEeecchhHHhc
Confidence 99854 554432 1345789999999999999999999974 9999999999999998877 9999999986544
Q ss_pred CCCCCCCCCCCCcccCccccccc---cCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCC-CCC--C
Q 022401 173 LHSQPKSTVGTPAYIAPEVLLRH---EYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQY-SVP--D 246 (298)
Q Consensus 173 ~~~~~~~~~~~~~~~aPE~~~~~---~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~--~ 246 (298)
.........++..|+|||.+.+. .++. ++||||+|++++++++|..||..... ......+...... ..+ .
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~-~~Di~slG~il~el~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd06616 160 DSIAKTRDAGCRPYMAPERIDPSARDGYDV-RSDVWSLGITLYEVATGKFPYPKWNS---VFDQLTQVVKGDPPILSNSE 235 (288)
T ss_pred cCCccccccCccCccCHHHhccccccCCcc-hhhhhHHHHHHHHHHhCCCCchhcch---HHHHHhhhcCCCCCcCCCcC
Confidence 33333444577889999998766 3444 49999999999999999999976542 2222233322221 111 2
Q ss_pred CCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 247 TNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 247 ~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
...++.++.+|+.+||+.||.+|||+ .+++.|||+..
T Consensus 236 ~~~~~~~l~~li~~~l~~~p~~Rpt~--------~~i~~~~~~~~ 272 (288)
T cd06616 236 EREFSPSFVNFINLCLIKDESKRPKY--------KELLEHPFIKD 272 (288)
T ss_pred CCccCHHHHHHHHHHccCChhhCcCH--------HHHhcChhhhc
Confidence 23478999999999999999999988 45557777753
No 271
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=5.4e-40 Score=282.35 Aligned_cols=257 Identities=30% Similarity=0.463 Sum_probs=202.0
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC---cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCC-----
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD---KIDENVQREIINHRSLRHPNIVRFKEVILTPT----- 92 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 92 (298)
..++|++.+.||+|++|.||++.++.+++.+++|.+.... .....+.+|+.++++++|||++++++++.+..
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~ 84 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF 84 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence 4578999999999999999999999889999999987543 22345678999999999999999999987654
Q ss_pred -----eEEEEEeccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecC
Q 022401 93 -----HLAIVMEYASGGELFERICNA-GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFG 166 (298)
Q Consensus 93 -----~~~lv~~~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~ 166 (298)
.+++++||+++ ++...+... ..+++..+..++.|++.||+|||+.|++|+||+|+||++++++. ++|+|||
T Consensus 85 ~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~--~kl~dfg 161 (302)
T cd07864 85 KKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQ--IKLADFG 161 (302)
T ss_pred cccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCc--EEeCccc
Confidence 78999999976 666666543 46899999999999999999999999999999999999998887 9999999
Q ss_pred ccccccCCCC--CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCC-
Q 022401 167 YSKSSVLHSQ--PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYS- 243 (298)
Q Consensus 167 ~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~- 243 (298)
++........ .....++..|+|||.+.+......++||||+|++++++++|..||...+..+.+..... .......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~ 240 (302)
T cd07864 162 LARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISR-LCGSPCPA 240 (302)
T ss_pred ccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH-HhCCCChh
Confidence 8864433221 12234567899999886554334459999999999999999999987665444333332 2211100
Q ss_pred -C-----------------------CCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 244 -V-----------------------PDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 244 -~-----------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
+ .....+|..+.+++.+||+.||.+|||+ .+++.|||+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~--------~~il~~~~~ 302 (302)
T cd07864 241 VWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTA--------EEALNSPWL 302 (302)
T ss_pred hcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCH--------HHHhcCCCC
Confidence 0 0112368999999999999999999987 566678885
No 272
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=7.6e-40 Score=277.74 Aligned_cols=250 Identities=21% Similarity=0.366 Sum_probs=204.9
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEcc-----CCcEEEEEEeecCCc--chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeE
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDKV-----TKELVAVKYIERGDK--IDENVQREIINHRSLRHPNIVRFKEVILTPTHL 94 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~~-----~~~~~aiK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 94 (298)
.++|++.+.||.|+||.||+++.+. +.+.+++|.+..... ....+.+|+.++++++|+|++++++++.+....
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 83 (275)
T cd05046 4 RSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPH 83 (275)
T ss_pred hHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcc
Confidence 4789999999999999999999753 356799998765433 246788999999999999999999999888999
Q ss_pred EEEEeccCCCCHHHHHHhCC---------CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeec
Q 022401 95 AIVMEYASGGELFERICNAG---------RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDF 165 (298)
Q Consensus 95 ~lv~~~~~~~sL~~~l~~~~---------~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~ 165 (298)
++|+|++++++|.+++.... .++...+..++.|++.+|+|||+.|++|+||+|+||+++.++. ++++||
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~--~~l~~~ 161 (275)
T cd05046 84 YMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQRE--VKVSLL 161 (275)
T ss_pred eEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCc--EEEccc
Confidence 99999999999999997655 6899999999999999999999999999999999999998887 999999
Q ss_pred CccccccCC--CCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCC
Q 022401 166 GYSKSSVLH--SQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQY 242 (298)
Q Consensus 166 ~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~ 242 (298)
+++...... .......++..|+|||.+.+.....+ +||||||++++++++ |..||...... ...........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~-~Di~slG~~l~~l~~~~~~p~~~~~~~----~~~~~~~~~~~ 236 (275)
T cd05046 162 SLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTK-SDVWSFGVLMWEVFTQGELPFYGLSDE----EVLNRLQAGKL 236 (275)
T ss_pred ccccccCcccccccCCceeEEeecChhhhccCCCCch-hhHHHHHHHHHHHHhCCCCCccccchH----HHHHHHHcCCc
Confidence 987532211 11222344567999999877766555 999999999999998 78899765442 23334444444
Q ss_pred CCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchh
Q 022401 243 SVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 243 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
.++.....|.++.+++.+||+.||.+|||+.+++..
T Consensus 237 ~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 237 ELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 444555689999999999999999999999888754
No 273
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.2e-39 Score=277.91 Aligned_cols=255 Identities=26% Similarity=0.386 Sum_probs=199.3
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEE----ccCCcEEEEEEeecCCc-chHHHHHHHHHHhcCCCCCeeeeeEEEEe--CCe
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRD----KVTKELVAVKYIERGDK-IDENVQREIINHRSLRHPNIVRFKEVILT--PTH 93 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~----~~~~~~~aiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~ 93 (298)
+..+|++.+.||+|+||.||.+.. ..++..|++|.+..... ....+.+|+.++++++|||++++.+++.. ...
T Consensus 2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (284)
T cd05081 2 EERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 81 (284)
T ss_pred ccccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCc
Confidence 346899999999999999999984 45688999999865432 34567899999999999999999998754 357
Q ss_pred EEEEEeccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCcccccc
Q 022401 94 LAIVMEYASGGELFERICNA-GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 172 (298)
Q Consensus 94 ~~lv~~~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~ 172 (298)
+++|+||+++++|.+++... ..++...+..++.+++.||.|||++|++|+||+|+||+++.++. ++|+|||++....
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~--~~l~dfg~~~~~~ 159 (284)
T cd05081 82 LRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENR--VKIGDFGLTKVLP 159 (284)
T ss_pred eEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCe--EEECCCccccccc
Confidence 89999999999999998654 46899999999999999999999999999999999999998887 9999999987543
Q ss_pred CCCCC----CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCch-----------hHHHHHHHH
Q 022401 173 LHSQP----KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPK-----------DFRKTIQRI 237 (298)
Q Consensus 173 ~~~~~----~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~-----------~~~~~~~~~ 237 (298)
..... ....+...|+|||.+.+..++.+ +||||||+++++|++|..|+....... .........
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd05081 160 QDKEYYKVREPGESPIFWYAPESLTESKFSVA-SDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIEL 238 (284)
T ss_pred CCCcceeecCCCCCceEeeCHHHhccCCcChH-HHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHH
Confidence 32211 11223446999999877776555 999999999999999877654332110 001111122
Q ss_pred hhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchh
Q 022401 238 LSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 238 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
.......+....++.++.+++.+||+.+|++|||+.+++..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 279 (284)
T cd05081 239 LKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQ 279 (284)
T ss_pred HhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 23333344455678999999999999999999999998864
No 274
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=1.4e-39 Score=273.47 Aligned_cols=240 Identities=26% Similarity=0.342 Sum_probs=195.7
Q ss_pred eeeccCCeEEEEEEEEccCC---cEEEEEEeecCCc--chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEeccCC
Q 022401 29 RDIGSGNFGVARLMRDKVTK---ELVAVKYIERGDK--IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASG 103 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~~~~---~~~aiK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~~ 103 (298)
+.||+|+||.||++.....+ ..+++|.+..... ..+.+.+|+.+++++.|+|++++++++. ...++++++++.+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 47999999999999875444 7899998876544 4567889999999999999999999875 4568999999999
Q ss_pred CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCC----CC
Q 022401 104 GELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP----KS 179 (298)
Q Consensus 104 ~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~----~~ 179 (298)
++|.+++.....+++..+..++.|++.++++||+.+++|+||+|+||+++.++. ++|+|||.+......... ..
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~--~kl~df~~~~~~~~~~~~~~~~~~ 157 (257)
T cd05060 80 GPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQ--AKISDFGMSRALGAGSDYYRATTA 157 (257)
T ss_pred CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCc--EEeccccccceeecCCcccccccC
Confidence 999999988888999999999999999999999999999999999999998887 999999988644332221 11
Q ss_pred CCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHH
Q 022401 180 TVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLI 258 (298)
Q Consensus 180 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (298)
..++..|+|||.+.+..++.+ +||||||+++|++++ |..||...+.. +....+.. ....+.+..++..+.+++
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~-~Di~slG~~l~~~~~~g~~p~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~l~~li 231 (257)
T cd05060 158 GRWPLKWYAPECINYGKFSSK-SDVWSYGVTLWEAFSYGAKPYGEMKGA----EVIAMLES-GERLPRPEECPQEIYSIM 231 (257)
T ss_pred ccccccccCHHHhcCCCCCcc-chHHHHHHHHHHHHcCCCCCcccCCHH----HHHHHHHc-CCcCCCCCCCCHHHHHHH
Confidence 122457999999877777665 999999999999998 99999876542 22222222 223344556789999999
Q ss_pred HHhhhhCCCCcccccccch
Q 022401 259 SRIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 259 ~~~l~~dp~~Rps~~~~l~ 277 (298)
.+||+.||.+||++.+++.
T Consensus 232 ~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 232 LSCWKYRPEDRPTFSELES 250 (257)
T ss_pred HHHhcCChhhCcCHHHHHH
Confidence 9999999999999988875
No 275
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=5.5e-40 Score=286.52 Aligned_cols=262 Identities=22% Similarity=0.309 Sum_probs=206.2
Q ss_pred CCCee-EEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcch---------------HHHHHHHHHHhcCCCCCeeeee
Q 022401 22 SDRYD-FVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKID---------------ENVQREIINHRSLRHPNIVRFK 85 (298)
Q Consensus 22 ~~~y~-~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~---------------~~~~~e~~~l~~l~h~~i~~~~ 85 (298)
.++|. +.+.||.|++|.||++.+..+++.||+|.+....... ..+.+|+.++++++|+||++++
T Consensus 7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 86 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV 86 (335)
T ss_pred ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence 35776 4578999999999999999889999999886543221 1467899999999999999999
Q ss_pred EEEEeCCeEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeec
Q 022401 86 EVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDF 165 (298)
Q Consensus 86 ~~~~~~~~~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~ 165 (298)
+++..++..++++|++. ++|.+.+.....+++..+..++.|++.||++||+.|++|+||+|+||+++.++. ++|+||
T Consensus 87 ~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~--~kl~df 163 (335)
T PTZ00024 87 DVYVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGI--CKIADF 163 (335)
T ss_pred EEEecCCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCC--EEECCc
Confidence 99999999999999996 589999988788999999999999999999999999999999999999998887 999999
Q ss_pred CccccccCC---------------CCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhH
Q 022401 166 GYSKSSVLH---------------SQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDF 230 (298)
Q Consensus 166 ~~~~~~~~~---------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~ 230 (298)
|++...... .......++..|+|||.+.+....+.++|+||||+++|+|++|..||...+..+..
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~ 243 (335)
T PTZ00024 164 GLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQL 243 (335)
T ss_pred cceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 988643310 11112235678999999876654455599999999999999999999877654443
Q ss_pred HHHHHHHhhcCCC-CC---------------------CCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhh
Q 022401 231 RKTIQRILSVQYS-VP---------------------DTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVW 288 (298)
Q Consensus 231 ~~~~~~~~~~~~~-~~---------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~ 288 (298)
............. ++ .....++++.++|.+||+.+|++|||+ .+++.|||
T Consensus 244 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~--------~~~l~~~~ 315 (335)
T PTZ00024 244 GRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISA--------KEALKHEY 315 (335)
T ss_pred HHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCH--------HHHhcCcc
Confidence 3333221111000 00 012357889999999999999999987 56667888
Q ss_pred hhhhhh
Q 022401 289 MFDATE 294 (298)
Q Consensus 289 ~~~~~~ 294 (298)
+++..+
T Consensus 316 ~~~~~~ 321 (335)
T PTZ00024 316 FKSDPL 321 (335)
T ss_pred cCCCCC
Confidence 875543
No 276
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=2.3e-40 Score=288.31 Aligned_cols=257 Identities=29% Similarity=0.407 Sum_probs=205.6
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC---CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCC-----eEE
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG---DKIDENVQREIINHRSLRHPNIVRFKEVILTPT-----HLA 95 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 95 (298)
+|++.+.||.|++|.||++++..++..+++|.+... ....+.+.+|+.++++++|+|++++.+++.... .+|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 599999999999999999999888999999988753 233456888999999999999999999988765 789
Q ss_pred EEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC
Q 022401 96 IVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS 175 (298)
Q Consensus 96 lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~ 175 (298)
++++++. ++|.+.+....++++..++.++.+++.||++||+.|++|+||+|.||+++.++. ++|+|||++.......
T Consensus 81 lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~--~~L~dfg~~~~~~~~~ 157 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCD--LKICDFGLARGVDPDE 157 (330)
T ss_pred EEecchh-hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC--EEEcccCceEeecccc
Confidence 9999997 488888888778999999999999999999999999999999999999998876 9999999987554432
Q ss_pred ----CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCC---------
Q 022401 176 ----QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQY--------- 242 (298)
Q Consensus 176 ----~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~--------- 242 (298)
......++..|+|||.+.+......++|+||+|+++++|++|..||...+..+..............
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 237 (330)
T cd07834 158 DEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSE 237 (330)
T ss_pred cccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhcccc
Confidence 1233456778999999887733344599999999999999999999877654433332221110000
Q ss_pred ---------------C-CCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 243 ---------------S-VPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 243 ---------------~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
. .......+.++.++|.+||+.||.+|||+.++ ++|||+.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~l--------l~~~~~~~ 294 (330)
T cd07834 238 KARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEA--------LAHPYLAQ 294 (330)
T ss_pred chhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHH--------HhCccHHh
Confidence 0 00112367899999999999999999988554 46666653
No 277
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=4e-40 Score=287.27 Aligned_cols=258 Identities=26% Similarity=0.402 Sum_probs=202.9
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC---cchHHHHHHHHHHhcCCCCCeeeeeEEEEe----CCeEE
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD---KIDENVQREIINHRSLRHPNIVRFKEVILT----PTHLA 95 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~ 95 (298)
++|++.+.||+|++|.||.+.+..+++.|++|++.... .....+.+|+.++++++||||+++++++.. ...++
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 78999999999999999999999999999999987542 334567789999999999999999998763 35789
Q ss_pred EEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC
Q 022401 96 IVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS 175 (298)
Q Consensus 96 lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~ 175 (298)
+|++|+. ++|.+++.....+++..++.++.|++.||.|||+.|++|+||+|+||+++.++. ++|+|||++.......
T Consensus 85 lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~--~kl~dfg~~~~~~~~~ 161 (334)
T cd07855 85 VVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCE--LRIGDFGMARGLSSSP 161 (334)
T ss_pred EEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCc--EEecccccceeecccC
Confidence 9999995 589998887778999999999999999999999999999999999999998887 9999999886433222
Q ss_pred CC-----CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHH--------------
Q 022401 176 QP-----KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQR-------------- 236 (298)
Q Consensus 176 ~~-----~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~-------------- 236 (298)
.. ....++..|+|||.+.+......++|+||+|+++|+|++|..||...+...........
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 241 (334)
T cd07855 162 TEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGS 241 (334)
T ss_pred cCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhch
Confidence 11 22356788999999866444455599999999999999999999765433222111110
Q ss_pred -----Hhh-cCC--CCC---CCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 237 -----ILS-VQY--SVP---DTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 237 -----~~~-~~~--~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
... ... ..+ .....++++.++|.+||+.||.+|||+ .++++|||+..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~--------~~~l~~~~~~~ 299 (334)
T cd07855 242 DRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITV--------EQALQHPFLAQ 299 (334)
T ss_pred hhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCH--------HHHHhChhhhh
Confidence 000 000 000 012368999999999999999999987 55667888863
No 278
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=8.5e-40 Score=276.36 Aligned_cols=250 Identities=24% Similarity=0.364 Sum_probs=202.5
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccCC---cEEEEEEeecCC--cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEE
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVTK---ELVAVKYIERGD--KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLA 95 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~---~~~aiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 95 (298)
+.++|++.+.||+|+||.||++.+..++ ..+++|.+.... .....+.+|+.++++++||||+++++++..++..+
T Consensus 2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (267)
T cd05066 2 DASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVM 81 (267)
T ss_pred CHHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 4568999999999999999999876443 368999876532 23456889999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC
Q 022401 96 IVMEYASGGELFERICNA-GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH 174 (298)
Q Consensus 96 lv~~~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~ 174 (298)
+++|++++++|.+++... ..++..++..++.+++.|+++||+.|++|+||+|+||+++.++. ++|+|||++......
T Consensus 82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~--~~l~dfg~~~~~~~~ 159 (267)
T cd05066 82 IVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLV--CKVSDFGLSRVLEDD 159 (267)
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCe--EEeCCCCcccccccc
Confidence 999999999999998764 46899999999999999999999999999999999999988876 999999988644332
Q ss_pred CCC----CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCC
Q 022401 175 SQP----KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNP 249 (298)
Q Consensus 175 ~~~----~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (298)
... .....+..|++||.+.+..++.+ +|+||||+++|++++ |..||......+. ...+... ...+....
T Consensus 160 ~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~-~Dv~slG~~l~ell~~g~~p~~~~~~~~~----~~~~~~~-~~~~~~~~ 233 (267)
T cd05066 160 PEAAYTTRGGKIPIRWTAPEAIAYRKFTSA-SDVWSYGIVMWEVMSYGERPYWEMSNQDV----IKAIEEG-YRLPAPMD 233 (267)
T ss_pred cceeeecCCCccceeecCHhHhccCccCch-hhhHHHHHHHHHHhcCCCCCcccCCHHHH----HHHHhCC-CcCCCCCC
Confidence 211 11122457999999977777665 999999999999886 9999987654322 2222222 33444556
Q ss_pred CCHHHHHHHHHhhhhCCCCcccccccchh
Q 022401 250 ISQECRDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 250 ~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
+++++.+++.+||+.+|.+||++.+++..
T Consensus 234 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 262 (267)
T cd05066 234 CPAALHQLMLDCWQKDRNERPKFEQIVSI 262 (267)
T ss_pred CCHHHHHHHHHHcccCchhCCCHHHHHHH
Confidence 78999999999999999999999888753
No 279
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=4.1e-40 Score=287.39 Aligned_cols=257 Identities=28% Similarity=0.429 Sum_probs=197.2
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC--CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeC-----CeE
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG--DKIDENVQREIINHRSLRHPNIVRFKEVILTP-----THL 94 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~ 94 (298)
.++|++.+.||+|++|.||.+.+..+++.||+|++... ......+.+|+.++++++|+|++++++++... ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 47899999999999999999999989999999988642 23345677899999999999999999987643 357
Q ss_pred EEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC
Q 022401 95 AIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH 174 (298)
Q Consensus 95 ~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~ 174 (298)
+++++++.+ ++.+.+ ....+++..++.++.|++.||++||+.|++|+||+|+||+++.++. ++|+|||++......
T Consensus 84 ~lv~e~~~~-~l~~~~-~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~--~kl~dfg~~~~~~~~ 159 (336)
T cd07849 84 YIVQELMET-DLYKLI-KTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCD--LKICDFGLARIADPE 159 (336)
T ss_pred EEEehhccc-CHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCC--EEECcccceeecccc
Confidence 999999965 777766 4457899999999999999999999999999999999999998887 999999988643322
Q ss_pred CC----CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHH-----------HHhh
Q 022401 175 SQ----PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQ-----------RILS 239 (298)
Q Consensus 175 ~~----~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~-----------~~~~ 239 (298)
.. .....++..|+|||.+.+....+.++||||+|+++|+|++|..||...+.......... .+..
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (336)
T cd07849 160 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIIS 239 (336)
T ss_pred ccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhc
Confidence 11 12235678899999876554444559999999999999999999976543222111110 0000
Q ss_pred ---------cCC--CCC---CCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhh
Q 022401 240 ---------VQY--SVP---DTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMF 290 (298)
Q Consensus 240 ---------~~~--~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~ 290 (298)
... ..+ .....++++.+++.+||+.||.+|||+. ++++|||+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~--------e~l~hp~~~ 296 (336)
T cd07849 240 LRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVE--------EALAHPYLE 296 (336)
T ss_pred hhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHH--------HHhcCcccc
Confidence 000 000 0123578899999999999999999884 555677765
No 280
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.4e-39 Score=278.28 Aligned_cols=247 Identities=23% Similarity=0.354 Sum_probs=198.4
Q ss_pred CeeEEeeeccCCeEEEEEEEEcc-----CCcEEEEEEeecCCc--chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEE
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKV-----TKELVAVKYIERGDK--IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAI 96 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~-----~~~~~aiK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 96 (298)
+|++.+.||+|+||.||++.... ....+++|.+..... ....+.+|+.++++++||||+++++.+......++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 58999999999999999998753 235688888765432 23567889999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHHhC------------------------CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEe
Q 022401 97 VMEYASGGELFERICNA------------------------GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLL 152 (298)
Q Consensus 97 v~~~~~~~sL~~~l~~~------------------------~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv 152 (298)
++||+.+++|.+++... ..++...++.++.+++.||.|||+.|++|+||+|+||++
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill 160 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLV 160 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEE
Confidence 99999999999987542 247788999999999999999999999999999999999
Q ss_pred eCCCCCCEEEeecCccccccCCC---CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCch
Q 022401 153 DGSPAPRLKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPK 228 (298)
Q Consensus 153 ~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~ 228 (298)
++++. ++|+|||++....... ......++..|+|||.+.+..++.+ +||||||+++++|++ |..||.......
T Consensus 161 ~~~~~--~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~-~Di~slG~~l~el~t~g~~p~~~~~~~~ 237 (290)
T cd05045 161 AEGRK--MKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQ-SDVWSFGVLLWEIVTLGGNPYPGIAPER 237 (290)
T ss_pred cCCCc--EEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchH-hHHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence 88876 9999999986432221 1222334568999999877766555 999999999999998 899997654322
Q ss_pred hHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchh
Q 022401 229 DFRKTIQRILSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
+.+ ........+.+..++.++.+++.+||+.||.+||++.+++..
T Consensus 238 -~~~----~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~ 282 (290)
T cd05045 238 -LFN----LLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKE 282 (290)
T ss_pred -HHH----HHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHH
Confidence 222 222223334445578999999999999999999999999864
No 281
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-41 Score=291.09 Aligned_cols=250 Identities=34% Similarity=0.553 Sum_probs=216.3
Q ss_pred EeeeccCCeEEEEEEEEccCCcEEEEEEeec---CCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEeccCCC
Q 022401 28 VRDIGSGNFGVARLMRDKVTKELVAVKYIER---GDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGG 104 (298)
Q Consensus 28 ~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~~~ 104 (298)
.++||+|-||+||-++++.+|+-||||++.+ ..+..+.+++|+.||+.+.||+|+.+.-.|+..+.+++|||-+.|.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD 648 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence 4789999999999999999999999999875 3455678999999999999999999999999999999999999776
Q ss_pred CHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeC-CCCCCEEEeecCccccccCCCCCCCCCC
Q 022401 105 ELFERIC-NAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDG-SPAPRLKICDFGYSKSSVLHSQPKSTVG 182 (298)
Q Consensus 105 sL~~~l~-~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~-~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 182 (298)
-|...++ +.+++++...+.++.||+.||+|||-++|+|+||||+||++.+ +.-+.+||+|||+++............|
T Consensus 649 MLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVVG 728 (888)
T KOG4236|consen 649 MLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVVG 728 (888)
T ss_pred HHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhcC
Confidence 6666664 5568999999999999999999999999999999999999954 3345799999999998888888888899
Q ss_pred CCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCC--CCCCCHHHHHHHHH
Q 022401 183 TPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPD--TNPISQECRDLISR 260 (298)
Q Consensus 183 ~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~ 260 (298)
++.|+|||++++++|... -|+||+|+++|.-+.|..||+..++ ....+++..+-+|. ...++++..+||..
T Consensus 729 TPAYLaPEVLrnkGyNrS-LDMWSVGVIiYVsLSGTFPFNEdEd------IndQIQNAaFMyPp~PW~eis~~AidlIn~ 801 (888)
T KOG4236|consen 729 TPAYLAPEVLRNKGYNRS-LDMWSVGVIIYVSLSGTFPFNEDED------INDQIQNAAFMYPPNPWSEISPEAIDLINN 801 (888)
T ss_pred CccccCHHHHhhcccccc-ccceeeeEEEEEEecccccCCCccc------hhHHhhccccccCCCchhhcCHHHHHHHHH
Confidence 999999999999999887 9999999999999999999997543 23344555543332 23478999999999
Q ss_pred hhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 261 IFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 261 ~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
+|+..-++|.|. ...+.||||++-
T Consensus 802 LLqVkm~kRysv--------dk~lsh~Wlq~y 825 (888)
T KOG4236|consen 802 LLQVKMRKRYSV--------DKSLSHPWLQDY 825 (888)
T ss_pred HHHHHHHHhcch--------Hhhccchhhhcc
Confidence 999999999965 677789999863
No 282
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=2.3e-39 Score=271.89 Aligned_cols=249 Identities=25% Similarity=0.417 Sum_probs=203.1
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEec
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY 100 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~ 100 (298)
+..+|++.+.||+|++|.||++.+. .+..+++|.+.........+.+|++++++++|||++++++++......+++++|
T Consensus 2 ~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd05112 2 HPSELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEF 80 (256)
T ss_pred ChhHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEc
Confidence 3468999999999999999999886 466799998876665667889999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCC--C
Q 022401 101 ASGGELFERICNA-GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ--P 177 (298)
Q Consensus 101 ~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~--~ 177 (298)
+.+++|.+++... ..++...++.++.+++.++.+||+.+++|+||+|+||+++.++. ++|+|||++........ .
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~--~~l~d~g~~~~~~~~~~~~~ 158 (256)
T cd05112 81 MEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQV--VKVSDFGMTRFVLDDQYTSS 158 (256)
T ss_pred CCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCe--EEECCCcceeecccCccccc
Confidence 9999999988654 46889999999999999999999999999999999999998776 99999998764322111 1
Q ss_pred CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHH
Q 022401 178 KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRD 256 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 256 (298)
.....+..|+|||.+.+..++.+ +|+||+|+++|++++ |..||....... ....+... .....+...++++.+
T Consensus 159 ~~~~~~~~~~aPe~~~~~~~~~~-~Dv~slG~~l~el~~~g~~p~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~ 232 (256)
T cd05112 159 TGTKFPVKWSSPEVFSFSKYSSK-SDVWSFGVLMWEVFSEGKTPYENRSNSE----VVETINAG-FRLYKPRLASQSVYE 232 (256)
T ss_pred CCCccchhhcCHhHhccCCcChH-HHHHHHHHHHHHHHcCCCCCCCcCCHHH----HHHHHhCC-CCCCCCCCCCHHHHH
Confidence 12234567999999877766555 999999999999998 899998755422 22222222 122223346899999
Q ss_pred HHHHhhhhCCCCcccccccchh
Q 022401 257 LISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 257 li~~~l~~dp~~Rps~~~~l~~ 278 (298)
++.+||+.+|++|||+.+++++
T Consensus 233 l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 233 LMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred HHHHHcccChhhCCCHHHHHHh
Confidence 9999999999999999888753
No 283
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=2.1e-40 Score=283.77 Aligned_cols=254 Identities=27% Similarity=0.452 Sum_probs=205.1
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC-cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEecc
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD-KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYA 101 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~ 101 (298)
+.|.....||+|+||.||++.+..++..+++|.+.... ...+.+.+|+.+++.++|+|++++++.+...+..++|+||+
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 101 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFL 101 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCC
Confidence 45677788999999999999998889999999886543 23456788999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC-CCCCC
Q 022401 102 SGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-QPKST 180 (298)
Q Consensus 102 ~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~-~~~~~ 180 (298)
++++|.+++.. ..+++..+..++.+++.|++|||+.|++|+||+|+||+++.++. ++|+|||++....... .....
T Consensus 102 ~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~--~kL~dfg~~~~~~~~~~~~~~~ 178 (292)
T cd06658 102 EGGALTDIVTH-TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGR--IKLSDFGFCAQVSKEVPKRKSL 178 (292)
T ss_pred CCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCC--EEEccCcchhhcccccccCcee
Confidence 99999988744 46899999999999999999999999999999999999998877 9999999876432222 12234
Q ss_pred CCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHH
Q 022401 181 VGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISR 260 (298)
Q Consensus 181 ~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 260 (298)
.++..|+|||.+.+..++.+ +|+||+|+++|++++|..||........+.. ... ......+.....+..+.+++..
T Consensus 179 ~~~~~y~aPE~~~~~~~~~~-~Dv~slGvil~el~~g~~p~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~li~~ 254 (292)
T cd06658 179 VGTPYWMAPEVISRLPYGTE-VDIWSLGIMVIEMIDGEPPYFNEPPLQAMRR-IRD--NLPPRVKDSHKVSSVLRGFLDL 254 (292)
T ss_pred ecCccccCHHHHccCCCCch-hhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHh--cCCCccccccccCHHHHHHHHH
Confidence 57788999999877776655 9999999999999999999987554322221 111 1122223333478899999999
Q ss_pred hhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 261 IFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 261 ~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
||..||.+|||+.+ +++|||+..
T Consensus 255 ~l~~~P~~Rpt~~~--------il~~~~~~~ 277 (292)
T cd06658 255 MLVREPSQRATAQE--------LLQHPFLKL 277 (292)
T ss_pred HccCChhHCcCHHH--------HhhChhhhc
Confidence 99999999998854 456777764
No 284
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=2.7e-39 Score=274.75 Aligned_cols=247 Identities=26% Similarity=0.412 Sum_probs=200.5
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC--cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEecc
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD--KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYA 101 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~ 101 (298)
-|++.+.||.|+||.||++.+..++..+|+|.+.... .....+.+|+.++++++|||++++++++..+..+++|+||+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 4788999999999999999998889999999876432 23356788999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC-CCCCC
Q 022401 102 SGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-QPKST 180 (298)
Q Consensus 102 ~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~-~~~~~ 180 (298)
++++|..++.. ..++...+..++.+++.++.+||+.|++|+||+|+||+++.++. ++|+|||++....... .....
T Consensus 85 ~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~--~~l~dfg~~~~~~~~~~~~~~~ 161 (277)
T cd06641 85 GGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGE--VKLADFGVAGQLTDTQIKRNTF 161 (277)
T ss_pred CCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCC--EEEeecccceecccchhhhccc
Confidence 99999988854 46899999999999999999999999999999999999998877 9999999875433221 11233
Q ss_pred CCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHH
Q 022401 181 VGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISR 260 (298)
Q Consensus 181 ~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 260 (298)
.++..|+|||.+.+..++.+ +|+||+|++++++++|..||....... ....+..... ......++.++.+++.+
T Consensus 162 ~~~~~y~~PE~~~~~~~~~~-~Dv~slG~~l~~l~~g~~p~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~i~~ 235 (277)
T cd06641 162 VGTPFWMAPEVIKQSAYDSK-ADIWSLGITAIELAKGEPPHSELHPMK----VLFLIPKNNP-PTLEGNYSKPLKEFVEA 235 (277)
T ss_pred cCCccccChhhhccCCCCch-hhHHHHHHHHHHHHcCCCCCCccchHH----HHHHHhcCCC-CCCCcccCHHHHHHHHH
Confidence 56778999999877766555 999999999999999999997654321 1222222211 12233478999999999
Q ss_pred hhhhCCCCcccccccchhh
Q 022401 261 IFVADPAAVSIFFFPLNMS 279 (298)
Q Consensus 261 ~l~~dp~~Rps~~~~l~~~ 279 (298)
||+.+|.+||++.+++++.
T Consensus 236 ~l~~~p~~Rp~~~~~l~~~ 254 (277)
T cd06641 236 CLNKEPSFRPTAKELLKHK 254 (277)
T ss_pred HccCChhhCcCHHHHHhCH
Confidence 9999999999886655443
No 285
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.7e-39 Score=279.60 Aligned_cols=255 Identities=21% Similarity=0.312 Sum_probs=204.4
Q ss_pred CCCCCCCCeeEEeeeccCCeEEEEEEEEc-------cCCcEEEEEEeecC--CcchHHHHHHHHHHhcC-CCCCeeeeeE
Q 022401 17 PIMHDSDRYDFVRDIGSGNFGVARLMRDK-------VTKELVAVKYIERG--DKIDENVQREIINHRSL-RHPNIVRFKE 86 (298)
Q Consensus 17 ~~~~~~~~y~~~~~lg~g~~~~vy~~~~~-------~~~~~~aiK~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~ 86 (298)
.+....++|++.+.||+|+||.||.++.. ..+..+++|..... ......+.+|+.+++.+ +||||+++++
T Consensus 9 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~ 88 (304)
T cd05101 9 RWEFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLG 88 (304)
T ss_pred cccccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeE
Confidence 34567899999999999999999999753 23457999987643 23345688999999999 8999999999
Q ss_pred EEEeCCeEEEEEeccCCCCHHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCce
Q 022401 87 VILTPTHLAIVMEYASGGELFERICNA----------------GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENT 150 (298)
Q Consensus 87 ~~~~~~~~~lv~~~~~~~sL~~~l~~~----------------~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~ni 150 (298)
++......++++||+.+++|.+++... ..++..++..++.|++.||.|||++|++|+||+|+||
T Consensus 89 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Ni 168 (304)
T cd05101 89 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNV 168 (304)
T ss_pred EEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceE
Confidence 999999999999999999999998653 2367788999999999999999999999999999999
Q ss_pred EeeCCCCCCEEEeecCccccccCCCC---CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCC
Q 022401 151 LLDGSPAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDE 226 (298)
Q Consensus 151 lv~~~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~ 226 (298)
+++.++. ++|+|||++........ .....++..|+|||++.+..++.+ +||||||+++|++++ |..||.....
T Consensus 169 li~~~~~--~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~~l~el~~~g~~p~~~~~~ 245 (304)
T cd05101 169 LVTENNV--MKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQ-SDVWSFGVLMWEIFTLGGSPYPGIPV 245 (304)
T ss_pred EEcCCCc--EEECCCccceecccccccccccCCCCCceeeCchhhccCCCCch-hhHHHHHHHHHHHHcCCCCCcccCCH
Confidence 9998876 99999999864432221 122334567999999887777666 999999999999998 7788876543
Q ss_pred chhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhh
Q 022401 227 PKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMS 279 (298)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~ 279 (298)
.+....+... .....+..++.++.+++.+||..+|.+|||+.+++...
T Consensus 246 ----~~~~~~~~~~-~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l 293 (304)
T cd05101 246 ----EELFKLLKEG-HRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDL 293 (304)
T ss_pred ----HHHHHHHHcC-CcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHH
Confidence 2223333222 22233445789999999999999999999999998754
No 286
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=9e-40 Score=280.21 Aligned_cols=253 Identities=24% Similarity=0.340 Sum_probs=198.5
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEccC--------------CcEEEEEEeecCC--cchHHHHHHHHHHhcCCCCCeeeee
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDKVT--------------KELVAVKYIERGD--KIDENVQREIINHRSLRHPNIVRFK 85 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~~~--------------~~~~aiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~ 85 (298)
.++|++.+.||+|+||.||.+++..+ ...||+|.+.... .....+.+|++++++++|+|+++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 36899999999999999999987543 2358999886542 2335688999999999999999999
Q ss_pred EEEEeCCeEEEEEeccCCCCHHHHHHhCC------------CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEee
Q 022401 86 EVILTPTHLAIVMEYASGGELFERICNAG------------RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLD 153 (298)
Q Consensus 86 ~~~~~~~~~~lv~~~~~~~sL~~~l~~~~------------~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~ 153 (298)
+++...+..++|+||+.+++|.+++.... .++...++.++.+++.|++|||+.|++|+||+|+||+++
T Consensus 84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~ 163 (295)
T cd05097 84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVG 163 (295)
T ss_pred EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEc
Confidence 99999999999999999999999885432 367888999999999999999999999999999999999
Q ss_pred CCCCCCEEEeecCccccccCCCC---CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh--CCCCCCCCCCch
Q 022401 154 GSPAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV--GGYPFEDPDEPK 228 (298)
Q Consensus 154 ~~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~--g~~pf~~~~~~~ 228 (298)
.++. ++|+|||++........ .....++..|+|||.+.+..++.+ +|+||||+++++|++ +..||.......
T Consensus 164 ~~~~--~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~DvwSlG~~l~el~~~~~~~p~~~~~~~~ 240 (295)
T cd05097 164 NHYT--IKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTA-SDVWAFGVTLWEMFTLCKEQPYSLLSDEQ 240 (295)
T ss_pred CCCc--EEecccccccccccCcceeccCcCcCceeecChhhhccCCcCch-hhHHHHHHHHHHHHHcCCCCCCcccChHH
Confidence 8776 99999998864322211 122234568999999887777655 999999999999998 567887765433
Q ss_pred hHHHHHHHHhh--cCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccch
Q 022401 229 DFRKTIQRILS--VQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 229 ~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~ 277 (298)
......+.... ...........|+.+.+++++||+.||.+|||+.+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 241 VIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred HHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 32222221111 11112233347899999999999999999999988864
No 287
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=2.6e-39 Score=272.40 Aligned_cols=246 Identities=22% Similarity=0.343 Sum_probs=198.9
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEecc
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYA 101 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~ 101 (298)
.++|++.+.||+|++|.||.+.+..++ .+++|.+.......+.+.+|+.++++++|+|++++++++. ....++++||+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~-~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05069 5 RESLRLDVKLGQGCFGEVWMGTWNGTT-KVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFM 82 (260)
T ss_pred hHHeeeeeeecCcCCCeEEEEEEcCCc-eEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcC
Confidence 367999999999999999999887554 5899988766656677889999999999999999999875 45678999999
Q ss_pred CCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCC--C
Q 022401 102 SGGELFERICNAG--RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ--P 177 (298)
Q Consensus 102 ~~~sL~~~l~~~~--~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~--~ 177 (298)
.+++|.+++.... .++...+..++.+++.||.|||+.|++|+||+|+||++++++. ++|+|||++........ .
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~--~~l~dfg~~~~~~~~~~~~~ 160 (260)
T cd05069 83 GKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLV--CKIADFGLARLIEDNEYTAR 160 (260)
T ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCe--EEECCCccceEccCCccccc
Confidence 9999999986543 4788999999999999999999999999999999999998887 99999998864322211 1
Q ss_pred CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHH
Q 022401 178 KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRD 256 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 256 (298)
....++..|+|||...+...+.+ +|+||||+++|++++ |..||......+. ...+.. ....+.....+..+.+
T Consensus 161 ~~~~~~~~y~~Pe~~~~~~~~~~-~Di~slG~~l~el~t~g~~p~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~ 234 (260)
T cd05069 161 QGAKFPIKWTAPEAALYGRFTIK-SDVWSFGILLTELVTKGRVPYPGMVNREV----LEQVER-GYRMPCPQGCPESLHE 234 (260)
T ss_pred CCCccchhhCCHHHhccCCcChH-HHHHHHHHHHHHHHhCCCCCCCCCCHHHH----HHHHHc-CCCCCCCcccCHHHHH
Confidence 12234567999998877776555 999999999999999 8899987554322 222222 2233334457899999
Q ss_pred HHHHhhhhCCCCcccccccch
Q 022401 257 LISRIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 257 li~~~l~~dp~~Rps~~~~l~ 277 (298)
++++||+.||.+||++.++++
T Consensus 235 li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 235 LMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred HHHHHccCCcccCcCHHHHHH
Confidence 999999999999999987774
No 288
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.7e-39 Score=272.40 Aligned_cols=249 Identities=31% Similarity=0.460 Sum_probs=205.8
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC---cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEec
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD---KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY 100 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~ 100 (298)
+|++.+.||+|++|.||++.+..++..+++|.+.... .....+.+|+.++++++|+|++++.+++......++|+++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 5899999999999999999999899999999987643 2334567899999999999999999999999999999999
Q ss_pred cCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCC
Q 022401 101 ASGGELFERICN----AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ 176 (298)
Q Consensus 101 ~~~~sL~~~l~~----~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~ 176 (298)
+++++|.+++.. ...+++..++.++.+++.|+.+||+.|++|+||+|+||+++.++. ++|+|||++...... .
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~--~kl~d~g~~~~~~~~-~ 157 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDL--VKIGDLGISKVLKKN-M 157 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCc--EEEeeccchhhhccC-C
Confidence 999999998865 356899999999999999999999999999999999999998776 999999988654433 2
Q ss_pred CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHH
Q 022401 177 PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRD 256 (298)
Q Consensus 177 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 256 (298)
.....++..|++||...+..++.+ +|+||+|++++++++|..||...+.. .....+...... +.....+.++.+
T Consensus 158 ~~~~~~~~~~~~Pe~~~~~~~~~~-~D~~slG~~~~~l~~g~~p~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~ 231 (256)
T cd08530 158 AKTQIGTPHYMAPEVWKGRPYSYK-SDIWSLGCLLYEMATFAPPFEARSMQ----DLRYKVQRGKYP-PIPPIYSQDLQN 231 (256)
T ss_pred cccccCCccccCHHHHCCCCCCch-hhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHhcCCCC-CCchhhCHHHHH
Confidence 334557889999999877776655 99999999999999999999876532 222222222222 222347899999
Q ss_pred HHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 257 LISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 257 li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
++.+||+.+|++|||+ .++++||++
T Consensus 232 li~~~l~~~p~~Rp~~--------~~~l~~p~~ 256 (256)
T cd08530 232 FIRSMLQVKPKLRPNC--------DKILASPAV 256 (256)
T ss_pred HHHHHcCCCcccCCCH--------HHHhcCCCC
Confidence 9999999999999987 555577764
No 289
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=1.6e-39 Score=271.79 Aligned_cols=245 Identities=36% Similarity=0.545 Sum_probs=205.9
Q ss_pred eccCCeEEEEEEEEccCCcEEEEEEeecCCc----chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEeccCCCCH
Q 022401 31 IGSGNFGVARLMRDKVTKELVAVKYIERGDK----IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 106 (298)
Q Consensus 31 lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~~~sL 106 (298)
||.|++|.||.+.+..+++.+++|++..... ....+..|+.++++++|+|++++++.+..+...+++++++.+++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 6899999999999988899999999876432 335678899999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC-CCCCCCCCCCc
Q 022401 107 FERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH-SQPKSTVGTPA 185 (298)
Q Consensus 107 ~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~-~~~~~~~~~~~ 185 (298)
.+++.....+++..+..++.|++.++.+||+.+++|+||+|+||+++.++. ++|+|||++...... .......++..
T Consensus 81 ~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~--~~l~d~~~~~~~~~~~~~~~~~~~~~~ 158 (250)
T cd05123 81 FSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGH--IKLTDFGLAKELSSEGSRTNTFCGTPE 158 (250)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCc--EEEeecCcceecccCCCcccCCcCCcc
Confidence 999988888999999999999999999999999999999999999998887 999999988654433 22334456778
Q ss_pred ccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhhhhC
Q 022401 186 YIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIFVAD 265 (298)
Q Consensus 186 ~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d 265 (298)
|++||...+...+.+ +|+||||+++|++++|..||...+. ......+..... +.+...++++.+++.+||..|
T Consensus 159 ~~~Pe~~~~~~~~~~-~D~~slG~~~~~l~~g~~p~~~~~~----~~~~~~~~~~~~--~~~~~~~~~l~~~i~~~l~~~ 231 (250)
T cd05123 159 YLAPEVLLGKGYGKA-VDWWSLGVLLYEMLTGKPPFYAEDR----KEIYEKILKDPL--RFPEFLSPEARDLISGLLQKD 231 (250)
T ss_pred ccChHHhCCCCCCch-hhHHHHHHHHHHHHHCCCCCCCCCH----HHHHHHHhcCCC--CCCCCCCHHHHHHHHHHhcCC
Confidence 999999877776555 9999999999999999999976554 233333333333 334446899999999999999
Q ss_pred CCCcccccccchhhhHHHhhhhhh
Q 022401 266 PAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 266 p~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
|++||++.. ..++++|||+
T Consensus 232 p~~R~~~~~-----~~~l~~~~~f 250 (250)
T cd05123 232 PTKRLGSGG-----AEEIKAHPFF 250 (250)
T ss_pred HhhCCCccc-----HHHHHhCCCC
Confidence 999999855 3677789986
No 290
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=2.3e-39 Score=273.73 Aligned_cols=249 Identities=23% Similarity=0.352 Sum_probs=202.3
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccCCc---EEEEEEeecCC--cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEE
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVTKE---LVAVKYIERGD--KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLA 95 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~---~~aiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 95 (298)
..++|+..+.||+|++|.||++....++. .+++|.+.... ...+.+.+|+.++++++|||++++.+++.+....+
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (268)
T cd05063 3 HPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAM 82 (268)
T ss_pred ChHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcE
Confidence 45689999999999999999999875544 68999876542 33456888999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC
Q 022401 96 IVMEYASGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH 174 (298)
Q Consensus 96 lv~~~~~~~sL~~~l~~-~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~ 174 (298)
+|+|++++++|.+++.. .+.++..++..++.+++.|++|||+.|++|+||+|+||+++.++. ++|+|||++......
T Consensus 83 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~--~kl~dfg~~~~~~~~ 160 (268)
T cd05063 83 IITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLE--CKVSDFGLSRVLEDD 160 (268)
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCc--EEECCCccceecccc
Confidence 99999999999999865 357899999999999999999999999999999999999998776 999999987644322
Q ss_pred CCCC----CCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCC
Q 022401 175 SQPK----STVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNP 249 (298)
Q Consensus 175 ~~~~----~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (298)
.... .......|++||.+.+..++.+ +||||||+++|++++ |..||......+ ....+.. ....+....
T Consensus 161 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~-~Dv~slG~il~ell~~g~~p~~~~~~~~----~~~~i~~-~~~~~~~~~ 234 (268)
T cd05063 161 PEGTYTTSGGKIPIRWTAPEAIAYRKFTSA-SDVWSFGIVMWEVMSFGERPYWDMSNHE----VMKAIND-GFRLPAPMD 234 (268)
T ss_pred cccceeccCCCcCceecCHHHhhcCCcChH-hHHHHHHHHHHHHHhCCCCCCCcCCHHH----HHHHHhc-CCCCCCCCC
Confidence 2111 1122357999999877777655 999999999999997 999997765422 2222222 223344445
Q ss_pred CCHHHHHHHHHhhhhCCCCcccccccch
Q 022401 250 ISQECRDLISRIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 250 ~~~~l~~li~~~l~~dp~~Rps~~~~l~ 277 (298)
.+.++.+++.+||+.+|.+||++.+++.
T Consensus 235 ~~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 235 CPSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred CCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 7899999999999999999999988875
No 291
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=3.4e-39 Score=274.36 Aligned_cols=255 Identities=26% Similarity=0.353 Sum_probs=197.2
Q ss_pred eeccCCeEEEEEEEEccCCcEEEEEEeecCCcc----hHHHHHHH---HHHhcCCCCCeeeeeEEEEeCCeEEEEEeccC
Q 022401 30 DIGSGNFGVARLMRDKVTKELVAVKYIERGDKI----DENVQREI---INHRSLRHPNIVRFKEVILTPTHLAIVMEYAS 102 (298)
Q Consensus 30 ~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~----~~~~~~e~---~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~ 102 (298)
.||+|+||.||++.+..+++.||+|.+...... ...+..|. ..++...||+++.+.+++..+..+++|+||+.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999999888999999988754211 11233333 34445679999999999999999999999999
Q ss_pred CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCCCCCCC
Q 022401 103 GGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVG 182 (298)
Q Consensus 103 ~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 182 (298)
+++|...+.....+++..++.++.|++.|+.|||+.+++|+||+|+||+++.++. ++|+|||++...... ......+
T Consensus 81 g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~--~kl~dfg~~~~~~~~-~~~~~~~ 157 (278)
T cd05606 81 GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGH--VRISDLGLACDFSKK-KPHASVG 157 (278)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCC--EEEccCcCccccCcc-CCcCcCC
Confidence 9999999988888999999999999999999999999999999999999998876 999999987643322 2234467
Q ss_pred CCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhh
Q 022401 183 TPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIF 262 (298)
Q Consensus 183 ~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 262 (298)
+..|+|||.+.+....+.++||||+|+++|+|++|..||........ .............. +..++.++.+++.+||
T Consensus 158 ~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~--~~~~s~~~~~li~~~l 234 (278)
T cd05606 158 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMTLTMAVEL--PDSFSPELRSLLEGLL 234 (278)
T ss_pred CcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccch-HHHHHHhhccCCCC--CCcCCHHHHHHHHHHh
Confidence 88999999987553333449999999999999999999987643221 12222222222333 3346899999999999
Q ss_pred hhCCCCcccccccchhhhHHHhhhhhhhhhh
Q 022401 263 VADPAAVSIFFFPLNMSCLLLFSFVWMFDAT 293 (298)
Q Consensus 263 ~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~~ 293 (298)
..||.+||..... ...++++|||+.+..
T Consensus 235 ~~~p~~R~~~~~~---~~~~ll~~~~~~~~~ 262 (278)
T cd05606 235 QRDVNRRLGCLGR---GAQEVKEHPFFRSLD 262 (278)
T ss_pred hcCHHhccCCCCC---CHHHHHhCccccCCC
Confidence 9999999932110 235667899987643
No 292
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=2e-39 Score=280.76 Aligned_cols=252 Identities=24% Similarity=0.340 Sum_probs=185.6
Q ss_pred EeeeccCCeEEEEEEEEcc--CCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCeeeeeEEEEe--CCeEEEEEeccCC
Q 022401 28 VRDIGSGNFGVARLMRDKV--TKELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILT--PTHLAIVMEYASG 103 (298)
Q Consensus 28 ~~~lg~g~~~~vy~~~~~~--~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~~~~~~ 103 (298)
+..||+|+||.||+|++.. ++..+|+|.+.... ....+.+|+.++++++|||++++++++.. +..++++++|+.+
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH 84 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC-CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC
Confidence 4689999999999999753 56789999886543 34567889999999999999999999854 4578999999865
Q ss_pred CCHHHHHHh---------CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCC--CCCCEEEeecCcccccc
Q 022401 104 GELFERICN---------AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGS--PAPRLKICDFGYSKSSV 172 (298)
Q Consensus 104 ~sL~~~l~~---------~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~--~~~~~~l~d~~~~~~~~ 172 (298)
+|.+.+.. ...+++..++.++.|++.||.|||+.|++|+||||+||++..+ ...+++|+|||++....
T Consensus 85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~ 163 (317)
T cd07867 85 -DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN 163 (317)
T ss_pred -cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccC
Confidence 67666632 1247889999999999999999999999999999999999432 12349999999987443
Q ss_pred CCCC----CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCch---------hHHHHHHHHh-
Q 022401 173 LHSQ----PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPK---------DFRKTIQRIL- 238 (298)
Q Consensus 173 ~~~~----~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~---------~~~~~~~~~~- 238 (298)
.... .....+++.|+|||.+.+....+.++||||+|+++|+|++|..||....+.. .+........
T Consensus 164 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (317)
T cd07867 164 SPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGF 243 (317)
T ss_pred CCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCC
Confidence 3221 1233567889999998776544555999999999999999999997543211 0110000000
Q ss_pred ----------hc--------CCC-------------CCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhh
Q 022401 239 ----------SV--------QYS-------------VPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFV 287 (298)
Q Consensus 239 ----------~~--------~~~-------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp 287 (298)
.. ... .......+..+.+++.+||+.||.+|||+ .++++||
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~--------~e~l~hp 315 (317)
T cd07867 244 PADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITS--------EQALQDP 315 (317)
T ss_pred CChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCH--------HHHhcCC
Confidence 00 000 00011235678899999999999999988 5556888
Q ss_pred hh
Q 022401 288 WM 289 (298)
Q Consensus 288 ~~ 289 (298)
|+
T Consensus 316 ~f 317 (317)
T cd07867 316 YF 317 (317)
T ss_pred CC
Confidence 85
No 293
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=5.2e-40 Score=279.64 Aligned_cols=254 Identities=29% Similarity=0.424 Sum_probs=203.1
Q ss_pred eeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc---chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEecc
Q 022401 25 YDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK---IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYA 101 (298)
Q Consensus 25 y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~ 101 (298)
|++.+.||+|++|.||++.+..+++.+++|.+..... ....+.+|+.++++++|+|++++++++.++...++++||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 6788999999999999999988899999998865432 3456788999999999999999999999999999999999
Q ss_pred CCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC-CCCC
Q 022401 102 SGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-QPKS 179 (298)
Q Consensus 102 ~~~sL~~~l~~-~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~-~~~~ 179 (298)
.+ ++.+.+.. ...+++..+..++.+++.|+.+||+.|++|+||+|+||+++.++. ++|+|||.+....... ....
T Consensus 81 ~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~--~~l~df~~~~~~~~~~~~~~~ 157 (283)
T cd05118 81 DT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGV--LKLADFGLARSFGSPVRPYTH 157 (283)
T ss_pred CC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCc--EEEeeeeeeEecCCCcccccC
Confidence 76 77777755 457899999999999999999999999999999999999998877 9999999876444332 2223
Q ss_pred CCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCC---------------CC
Q 022401 180 TVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQY---------------SV 244 (298)
Q Consensus 180 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~---------------~~ 244 (298)
..++..|+|||.+.+....+.++|+||+|+++|++++|..||...+..+........+..... ..
T Consensus 158 ~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd05118 158 YVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSF 237 (283)
T ss_pred ccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhh
Confidence 456778999999877634445599999999999999999999876654443333222111100 00
Q ss_pred C---------CCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 245 P---------DTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 245 ~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
+ ....++.++.++|.+||+.||.+||++ .+++.|||+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~--------~~ll~~~~~ 283 (283)
T cd05118 238 PKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITA--------EQALAHPYF 283 (283)
T ss_pred ccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCH--------HHHhhCCCC
Confidence 0 112367899999999999999999987 566678885
No 294
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-41 Score=313.14 Aligned_cols=262 Identities=29% Similarity=0.438 Sum_probs=223.9
Q ss_pred CCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeec---C-CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEE
Q 022401 20 HDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIER---G-DKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLA 95 (298)
Q Consensus 20 ~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~---~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 95 (298)
...++|.|+++||.|+||.|.+++++.+++.||.|++.+ - .....-|+.|-.++.--..+=|+.++..|.+++++|
T Consensus 72 l~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LY 151 (1317)
T KOG0612|consen 72 LKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLY 151 (1317)
T ss_pred CCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceE
Confidence 445789999999999999999999999999999999876 1 223355778888888777888999999999999999
Q ss_pred EEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC
Q 022401 96 IVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS 175 (298)
Q Consensus 96 lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~ 175 (298)
+||+|++||+|..+++...++++.-++.++..++.||+-||+.|+|||||||+|||+|..|+ ++|.|||.|-.....+
T Consensus 152 lVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GH--ikLADFGsClkm~~dG 229 (1317)
T KOG0612|consen 152 LVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGH--IKLADFGSCLKMDADG 229 (1317)
T ss_pred EEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCc--EeeccchhHHhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999 9999999886554433
Q ss_pred --CCCCCCCCCcccCccccccc----cCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhc--CCCCCCC
Q 022401 176 --QPKSTVGTPAYIAPEVLLRH----EYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSV--QYSVPDT 247 (298)
Q Consensus 176 --~~~~~~~~~~~~aPE~~~~~----~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~ 247 (298)
......|||.|+|||++... +.+++.+|.||+|+++|||+.|..||.. +.+.+...+|.+- .+.+|..
T Consensus 230 ~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa----dslveTY~KIm~hk~~l~FP~~ 305 (1317)
T KOG0612|consen 230 TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA----DSLVETYGKIMNHKESLSFPDE 305 (1317)
T ss_pred cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH----HHHHHHHHHHhchhhhcCCCcc
Confidence 33566799999999998732 3334459999999999999999999997 5567777777765 4555655
Q ss_pred CCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhhh
Q 022401 248 NPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDAT 293 (298)
Q Consensus 248 ~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~~ 293 (298)
..+|++..+||.+++ .+|..|.. ++-+.++-+|||+.+++
T Consensus 306 ~~VSeeakdLI~~ll-~~~e~RLg-----rngiedik~HpFF~g~~ 345 (1317)
T KOG0612|consen 306 TDVSEEAKDLIEALL-CDREVRLG-----RNGIEDIKNHPFFEGID 345 (1317)
T ss_pred cccCHHHHHHHHHHh-cChhhhcc-----cccHHHHHhCccccCCC
Confidence 669999999999999 78999985 23358888999998763
No 295
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.2e-39 Score=279.26 Aligned_cols=253 Identities=22% Similarity=0.315 Sum_probs=200.9
Q ss_pred CCCCCCeeEEeeeccCCeEEEEEEEEc-------cCCcEEEEEEeecCC--cchHHHHHHHHHHhcC-CCCCeeeeeEEE
Q 022401 19 MHDSDRYDFVRDIGSGNFGVARLMRDK-------VTKELVAVKYIERGD--KIDENVQREIINHRSL-RHPNIVRFKEVI 88 (298)
Q Consensus 19 ~~~~~~y~~~~~lg~g~~~~vy~~~~~-------~~~~~~aiK~~~~~~--~~~~~~~~e~~~l~~l-~h~~i~~~~~~~ 88 (298)
....++|.+.+.||+|++|.||++++. .....+++|.+.... .....+.+|+.+++++ +||||+++++++
T Consensus 8 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 87 (314)
T cd05099 8 EFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVC 87 (314)
T ss_pred cccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEE
Confidence 344579999999999999999999863 234578999877533 2235678899999999 699999999999
Q ss_pred EeCCeEEEEEeccCCCCHHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEe
Q 022401 89 LTPTHLAIVMEYASGGELFERICNA----------------GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLL 152 (298)
Q Consensus 89 ~~~~~~~lv~~~~~~~sL~~~l~~~----------------~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv 152 (298)
.+...+++++||+++++|.+++... ..++..++..++.|++.||.|||++|++|+||+|+||++
T Consensus 88 ~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill 167 (314)
T cd05099 88 TQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLV 167 (314)
T ss_pred ccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEE
Confidence 9989999999999999999998653 247888999999999999999999999999999999999
Q ss_pred eCCCCCCEEEeecCccccccCCC---CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCch
Q 022401 153 DGSPAPRLKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPK 228 (298)
Q Consensus 153 ~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~ 228 (298)
+.++. ++|+|||++....... ......++..|+|||.+.+..++.+ +||||||+++|++++ |..||......
T Consensus 168 ~~~~~--~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~DiwslG~~l~el~~~g~~p~~~~~~~- 243 (314)
T cd05099 168 TEDNV--MKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQ-SDVWSFGILMWEIFTLGGSPYPGIPVE- 243 (314)
T ss_pred cCCCc--EEEccccccccccccccccccccCCCCccccCHHHHccCCcCcc-chhhHHHHHHHHHHhCCCCCCCCCCHH-
Confidence 98876 9999999986443211 1122233457999999877776655 999999999999999 88898765432
Q ss_pred hHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhh
Q 022401 229 DFRKTIQRILSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMS 279 (298)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~ 279 (298)
+....+... .....+..++.++.+++.+||+.||.+|||+.+++...
T Consensus 244 ---~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l 290 (314)
T cd05099 244 ---ELFKLLREG-HRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEAL 290 (314)
T ss_pred ---HHHHHHHcC-CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 222222222 22223445789999999999999999999999988644
No 296
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.6e-39 Score=276.69 Aligned_cols=248 Identities=24% Similarity=0.365 Sum_probs=200.2
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEc-----cCCcEEEEEEeecCC-cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEE
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDK-----VTKELVAVKYIERGD-KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLA 95 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~-----~~~~~~aiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 95 (298)
..+|++.+.||+|+||.||.+... .++..+++|.+.... .....+.+|++++++++|+||+++.+++......+
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLL 83 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceE
Confidence 467999999999999999999742 356688999876533 33457889999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHHhCC---------------CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCE
Q 022401 96 IVMEYASGGELFERICNAG---------------RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRL 160 (298)
Q Consensus 96 lv~~~~~~~sL~~~l~~~~---------------~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~ 160 (298)
+++||+.+++|.+++.... .+++..+..++.|++.|++|||+.|++|+||+|+||++++++. +
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~--~ 161 (280)
T cd05092 84 MVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLV--V 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCC--E
Confidence 9999999999999986543 3788999999999999999999999999999999999998776 9
Q ss_pred EEeecCccccccCCC---CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHH
Q 022401 161 KICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQR 236 (298)
Q Consensus 161 ~l~d~~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~ 236 (298)
+|+|||++....... ......+++.|+|||.+.+..++.+ +||||||+++|+|++ |..||......+. ...
T Consensus 162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~el~~~g~~p~~~~~~~~~----~~~ 236 (280)
T cd05092 162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTE-SDIWSFGVVLWEIFTYGKQPWYQLSNTEA----IEC 236 (280)
T ss_pred EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCch-hhHHHHHHHHHHHHcCCCCCCccCCHHHH----HHH
Confidence 999999876332221 1122234578999999887777666 999999999999998 8899876554322 222
Q ss_pred HhhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccch
Q 022401 237 ILSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~ 277 (298)
+.... ....+..+|+++.+++.+||+.||.+||++.+++.
T Consensus 237 ~~~~~-~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 237 ITQGR-ELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred HHcCc-cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 22221 22334457899999999999999999999988875
No 297
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=3e-39 Score=275.51 Aligned_cols=253 Identities=28% Similarity=0.409 Sum_probs=199.4
Q ss_pred eeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc---chHHHHHHHHHHhcC---CCCCeeeeeEEEEeCCe-----
Q 022401 25 YDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK---IDENVQREIINHRSL---RHPNIVRFKEVILTPTH----- 93 (298)
Q Consensus 25 y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~---~~~~~~~e~~~l~~l---~h~~i~~~~~~~~~~~~----- 93 (298)
|++.+.||+|++|.||+++++.+++.+++|.+..... ....+.+|+.+++++ .|+|++++++++.....
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 7899999999999999999988899999999874322 223455677776655 59999999999988766
Q ss_pred EEEEEeccCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccc
Q 022401 94 LAIVMEYASGGELFERICNAG--RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSS 171 (298)
Q Consensus 94 ~~lv~~~~~~~sL~~~l~~~~--~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~ 171 (298)
+++++|++.+ +|.+++.... .+++..++.++.+++.||++||+.+++|+||+|+||+++.++. ++|+|||++...
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~--~~l~dfg~~~~~ 157 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQ--VKIADFGLARIY 157 (287)
T ss_pred eEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCC--EEEeccCcceec
Confidence 9999999975 7888886643 4899999999999999999999999999999999999998876 999999988755
Q ss_pred cCCCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcC-CCCC-----
Q 022401 172 VLHSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQ-YSVP----- 245 (298)
Q Consensus 172 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~----- 245 (298)
..........++..|+|||.+.+..++.+ +|+||+|+++|+|++|..||......+............. ..++
T Consensus 158 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~-~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (287)
T cd07838 158 SFEMALTSVVVTLWYRAPEVLLQSSYATP-VDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSL 236 (287)
T ss_pred cCCcccccccccccccChHHhccCCCCCc-chhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCccc
Confidence 44433334456788999999987777665 9999999999999999999987665554444433221100 0000
Q ss_pred ---------------CCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 246 ---------------DTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 246 ---------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
....+++.+.+++.+||+.||.+||++ .++++|||+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~--------~~il~~~~~ 287 (287)
T cd07838 237 PRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISA--------FEALQHPYF 287 (287)
T ss_pred chhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCH--------HHHhcCcCC
Confidence 011246788999999999999999987 555578885
No 298
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.8e-40 Score=299.30 Aligned_cols=258 Identities=21% Similarity=0.327 Sum_probs=187.9
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEccC-CcEEEEE------------------EeecCCcchHHHHHHHHHHhcCCCCCee
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDKVT-KELVAVK------------------YIERGDKIDENVQREIINHRSLRHPNIV 82 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~~~-~~~~aiK------------------~~~~~~~~~~~~~~e~~~l~~l~h~~i~ 82 (298)
.++|++++.||+|+||.||++..+.. +...+.| ...........+.+|+.++++++||||+
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 46899999999999999999876432 2222222 1222223345578899999999999999
Q ss_pred eeeEEEEeCCeEEEEEeccCCCCHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCC
Q 022401 83 RFKEVILTPTHLAIVMEYASGGELFERICNA-----GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPA 157 (298)
Q Consensus 83 ~~~~~~~~~~~~~lv~~~~~~~sL~~~l~~~-----~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~ 157 (298)
++++++.+....|++++++.+ ++..++... .......+..++.|++.||+|||++|++|+||||+||+++.++.
T Consensus 227 ~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~ 305 (501)
T PHA03210 227 KIEEILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGK 305 (501)
T ss_pred cEeEEEEECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCC
Confidence 999999999999999999854 666665432 22346678889999999999999999999999999999998887
Q ss_pred CCEEEeecCccccccCCCC--CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCC-CCCCCC--chhHHH
Q 022401 158 PRLKICDFGYSKSSVLHSQ--PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYP-FEDPDE--PKDFRK 232 (298)
Q Consensus 158 ~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~p-f~~~~~--~~~~~~ 232 (298)
+||+|||++........ .....++..|+|||.+.+..++.+ +|||||||++|+|++|..+ +..... ...+.+
T Consensus 306 --vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~ 382 (501)
T PHA03210 306 --IVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEI-TDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLK 382 (501)
T ss_pred --EEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcH-HHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHH
Confidence 99999999864433221 123458899999999988877666 9999999999999998754 433221 122222
Q ss_pred HHHHHhhcCCCC--------------------------CCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhh
Q 022401 233 TIQRILSVQYSV--------------------------PDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSF 286 (298)
Q Consensus 233 ~~~~~~~~~~~~--------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~h 286 (298)
.+..+....... ......+.++.++|.+||+.||.+|||+ .+++.|
T Consensus 383 ~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa--------~elL~h 454 (501)
T PHA03210 383 IIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGA--------AELLAL 454 (501)
T ss_pred HHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCH--------HHHhhC
Confidence 221111000000 0111356788899999999999999988 555578
Q ss_pred hhhhh
Q 022401 287 VWMFD 291 (298)
Q Consensus 287 p~~~~ 291 (298)
||+.+
T Consensus 455 p~f~~ 459 (501)
T PHA03210 455 PLFSA 459 (501)
T ss_pred hhhhc
Confidence 88764
No 299
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=4.5e-39 Score=270.93 Aligned_cols=248 Identities=22% Similarity=0.371 Sum_probs=200.8
Q ss_pred CCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEe
Q 022401 20 HDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVME 99 (298)
Q Consensus 20 ~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~ 99 (298)
+..++|++.+.||+|+||.||++... .+..+++|.+.......+.+.+|+.++++++|+|++++.+++.. ...++++|
T Consensus 3 ~~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e 80 (260)
T cd05073 3 IPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITE 80 (260)
T ss_pred ccccceeEEeEecCccceEEEEEEec-CCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEE
Confidence 45689999999999999999999865 45569999887665556778899999999999999999999877 77899999
Q ss_pred ccCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCC
Q 022401 100 YASGGELFERICNA--GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP 177 (298)
Q Consensus 100 ~~~~~sL~~~l~~~--~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~ 177 (298)
|+++++|.+++... ..++...+..++.+++.||.+||+.|++|+||+|+||+++.++. ++|+|||.+.........
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~--~~l~d~~~~~~~~~~~~~ 158 (260)
T cd05073 81 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLV--CKIADFGLARVIEDNEYT 158 (260)
T ss_pred eCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCc--EEECCCcceeeccCCCcc
Confidence 99999999998653 35788899999999999999999999999999999999988876 999999987643322111
Q ss_pred --CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHH
Q 022401 178 --KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQEC 254 (298)
Q Consensus 178 --~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (298)
....++..|+|||.+....++.+ +|+||||+++|++++ |..||...+.... ...+ ......+.....+.++
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~-~Di~slG~~l~~l~t~g~~p~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~ 232 (260)
T cd05073 159 AREGAKFPIKWTAPEAINFGSFTIK-SDVWSFGILLMEIVTYGRIPYPGMSNPEV----IRAL-ERGYRMPRPENCPEEL 232 (260)
T ss_pred cccCCcccccccCHhHhccCCcCcc-ccchHHHHHHHHHHhcCCCCCCCCCHHHH----HHHH-hCCCCCCCcccCCHHH
Confidence 12234567999999877666555 999999999999998 8999987544222 2222 2223334445578999
Q ss_pred HHHHHHhhhhCCCCcccccccch
Q 022401 255 RDLISRIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 255 ~~li~~~l~~dp~~Rps~~~~l~ 277 (298)
.+++.+||..||++||++.+++.
T Consensus 233 ~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 233 YNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred HHHHHHHcccCcccCcCHHHHHH
Confidence 99999999999999999877764
No 300
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=3.1e-39 Score=274.76 Aligned_cols=253 Identities=21% Similarity=0.248 Sum_probs=203.4
Q ss_pred CCCCCCeeEEeeeccCCeEEEEEEEEcc----CCcEEEEEEeecCC--cchHHHHHHHHHHhcCCCCCeeeeeEEEEe-C
Q 022401 19 MHDSDRYDFVRDIGSGNFGVARLMRDKV----TKELVAVKYIERGD--KIDENVQREIINHRSLRHPNIVRFKEVILT-P 91 (298)
Q Consensus 19 ~~~~~~y~~~~~lg~g~~~~vy~~~~~~----~~~~~aiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~ 91 (298)
.++.++|++.+.||+|+||.||.+.+.. ++..+++|.+.... .....+.+|+.++++++|+|++++++++.. +
T Consensus 2 ~~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~ 81 (280)
T cd05043 2 AISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDG 81 (280)
T ss_pred ccchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence 3567899999999999999999999875 35779999876432 224557889999999999999999998776 4
Q ss_pred CeEEEEEeccCCCCHHHHHHhC--------CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEe
Q 022401 92 THLAIVMEYASGGELFERICNA--------GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKIC 163 (298)
Q Consensus 92 ~~~~lv~~~~~~~sL~~~l~~~--------~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~ 163 (298)
...+++++++.+++|.+++... ..++..+++.++.+++.||+|||+.+++|+||+|+||+++.++. ++|+
T Consensus 82 ~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~--~kl~ 159 (280)
T cd05043 82 EPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQ--VKIT 159 (280)
T ss_pred CCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCc--EEEC
Confidence 6789999999999999988653 45889999999999999999999999999999999999988876 9999
Q ss_pred ecCccccccCCC---CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhh
Q 022401 164 DFGYSKSSVLHS---QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILS 239 (298)
Q Consensus 164 d~~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~ 239 (298)
|||+++...... ......++..|+|||.+.+..++.+ +||||||+++|++++ |..||...+..+ .. ....
T Consensus 160 d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~-~Di~slG~~l~el~~~g~~p~~~~~~~~----~~-~~~~ 233 (280)
T cd05043 160 DNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSA-SDVWSFGVLLWELMTLGQTPYVEIDPFE----MA-AYLK 233 (280)
T ss_pred CCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCch-hhHHHhHHHHHHHhcCCCCCcCcCCHHH----HH-HHHH
Confidence 999986432211 1122334567999999877777665 999999999999998 999997754322 12 2222
Q ss_pred cCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhh
Q 022401 240 VQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMS 279 (298)
Q Consensus 240 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~ 279 (298)
..........+|+++.+++.+||..||++|||+.+++...
T Consensus 234 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l 273 (280)
T cd05043 234 DGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCL 273 (280)
T ss_pred cCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHH
Confidence 2334444455789999999999999999999999988643
No 301
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=1.4e-39 Score=277.22 Aligned_cols=255 Identities=27% Similarity=0.425 Sum_probs=205.0
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEc----cCCcEEEEEEeecCCc--chHHHHHHHHHHhcCCCCCeeeeeEEEEe--CCe
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDK----VTKELVAVKYIERGDK--IDENVQREIINHRSLRHPNIVRFKEVILT--PTH 93 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~----~~~~~~aiK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~ 93 (298)
..+|++.+.||+|+||.||++... .++..+|+|.+..... ....+.+|+.++++++|+|++++++++.. ...
T Consensus 3 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~ 82 (284)
T cd05038 3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRS 82 (284)
T ss_pred hhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCc
Confidence 357899999999999999999864 3478899999886655 36778999999999999999999999877 557
Q ss_pred EEEEEeccCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCcccccc
Q 022401 94 LAIVMEYASGGELFERICNAG-RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 172 (298)
Q Consensus 94 ~~lv~~~~~~~sL~~~l~~~~-~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~ 172 (298)
.++++||+++++|.+++.... .++...+..++.+++.||.+||+.|++|+||+|+||+++.++. ++|+|||.+....
T Consensus 83 ~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~--~~l~dfg~~~~~~ 160 (284)
T cd05038 83 LRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDL--VKISDFGLAKVLP 160 (284)
T ss_pred eEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCC--EEEcccccccccc
Confidence 899999999999999997654 5899999999999999999999999999999999999998876 9999999887544
Q ss_pred CCCC----CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCch----------hHHHHHHHHh
Q 022401 173 LHSQ----PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPK----------DFRKTIQRIL 238 (298)
Q Consensus 173 ~~~~----~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~----------~~~~~~~~~~ 238 (298)
.... .........|++||...+..++.+ +|+||||+++++|++|..|+....... ..........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~-~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd05038 161 EDKDYYYVKEPGESPIFWYAPECLRTSKFSSA-SDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELL 239 (284)
T ss_pred cCCcceeccCCCCCcccccCcHHHccCCCCcc-cchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHH
Confidence 2211 112234456999999877776655 999999999999999999986543211 0122222233
Q ss_pred hcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhh
Q 022401 239 SVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMS 279 (298)
Q Consensus 239 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~ 279 (298)
......+.....+.++.+++.+||+.||.+|||+.+++++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l 280 (284)
T cd05038 240 KEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIV 280 (284)
T ss_pred HcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHH
Confidence 33334444555789999999999999999999999988654
No 302
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.8e-39 Score=280.78 Aligned_cols=255 Identities=24% Similarity=0.316 Sum_probs=196.4
Q ss_pred CeeEEeeeccCCeEEEEEEEEcc--CCcEEEEEEeecCC----cchHHHHHHHHHHhcCCCCCeeeeeEEEEeC--CeEE
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKV--TKELVAVKYIERGD----KIDENVQREIINHRSLRHPNIVRFKEVILTP--THLA 95 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~--~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~ 95 (298)
+|++.+.||+|++|.||++.+.. ++..||+|.+.... ...+.+.+|+.++++++|||++++++++.+. ..++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 58999999999999999999987 78999999987632 3346678899999999999999999999988 7899
Q ss_pred EEEeccCCCCHHHHHHh-----CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeC----CCCCCEEEeecC
Q 022401 96 IVMEYASGGELFERICN-----AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDG----SPAPRLKICDFG 166 (298)
Q Consensus 96 lv~~~~~~~sL~~~l~~-----~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~----~~~~~~~l~d~~ 166 (298)
+|+|++.+ ++.+.+.. ...+++..++.++.|++.||+|||+.+++|+||+|+||+++. ++. ++|+|||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~--~kl~Dfg 157 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGV--VKIGDLG 157 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccce--EEECCCc
Confidence 99999965 66666532 136889999999999999999999999999999999999987 555 9999999
Q ss_pred ccccccCCCC----CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCch---------hHHHH
Q 022401 167 YSKSSVLHSQ----PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPK---------DFRKT 233 (298)
Q Consensus 167 ~~~~~~~~~~----~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~---------~~~~~ 233 (298)
++........ .....++..|+|||.+.+......++|+||||+++++|++|..||....... .+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (316)
T cd07842 158 LARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERI 237 (316)
T ss_pred cccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHH
Confidence 8864432222 1233467789999988765544555999999999999999999997654322 11111
Q ss_pred HHHHhh--------------------cCCCCCCC-----------CCCCHHHHHHHHHhhhhCCCCcccccccchhhhHH
Q 022401 234 IQRILS--------------------VQYSVPDT-----------NPISQECRDLISRIFVADPAAVSIFFFPLNMSCLL 282 (298)
Q Consensus 234 ~~~~~~--------------------~~~~~~~~-----------~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~ 282 (298)
...+.. ........ ...+.++.+++.+||+.||++|||+ .+
T Consensus 238 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~--------~e 309 (316)
T cd07842 238 FEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITA--------EE 309 (316)
T ss_pred HHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCH--------HH
Confidence 110000 00000000 1356789999999999999999987 55
Q ss_pred Hhhhhhh
Q 022401 283 LFSFVWM 289 (298)
Q Consensus 283 ~~~hp~~ 289 (298)
+++|||+
T Consensus 310 il~~~~f 316 (316)
T cd07842 310 ALEHPYF 316 (316)
T ss_pred HhcCCCC
Confidence 5678875
No 303
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1.1e-39 Score=279.96 Aligned_cols=253 Identities=26% Similarity=0.459 Sum_probs=205.1
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC-cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEecc
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD-KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYA 101 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~ 101 (298)
.-|+....||+|+||.||++.+..+++.+++|.+.... ...+.+.+|+.+++.++|||++++++++..++..++++||+
T Consensus 21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~ 100 (297)
T cd06659 21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFL 100 (297)
T ss_pred hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecC
Confidence 44666778999999999999998889999999986532 33456788999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC-CCCCC
Q 022401 102 SGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-QPKST 180 (298)
Q Consensus 102 ~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~-~~~~~ 180 (298)
++++|...+.. ..+++..++.++.|++.||++||+.|++|+||+|+||+++.++. ++|+|||++....... .....
T Consensus 101 ~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~--~kL~dfg~~~~~~~~~~~~~~~ 177 (297)
T cd06659 101 QGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGR--VKLSDFGFCAQISKDVPKRKSL 177 (297)
T ss_pred CCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCc--EEEeechhHhhcccccccccce
Confidence 99999887744 56899999999999999999999999999999999999998887 9999999876333222 12334
Q ss_pred CCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCC-CCCCCCCCCHHHHHHHH
Q 022401 181 VGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQY-SVPDTNPISQECRDLIS 259 (298)
Q Consensus 181 ~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~ 259 (298)
.++..|+|||.+.+..++.+ +|+||+|+++++|++|..||........ ...+..... ........+.++.+++.
T Consensus 178 ~~~~~y~aPE~~~~~~~~~~-~Dv~slG~il~el~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~i~ 252 (297)
T cd06659 178 VGTPYWMAPEVISRTPYGTE-VDIWSLGIMVIEMVDGEPPYFSDSPVQA----MKRLRDSPPPKLKNAHKISPVLRDFLE 252 (297)
T ss_pred ecCccccCHHHHccCCCCch-hhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHhccCCCCccccCCCCHHHHHHHH
Confidence 57789999999977777655 9999999999999999999986543222 222222221 22233347899999999
Q ss_pred HhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 260 RIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 260 ~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
+||+.+|.+||++ .++++|||+..
T Consensus 253 ~~l~~~P~~Rps~--------~~ll~~~~~~~ 276 (297)
T cd06659 253 RMLTREPQERATA--------QELLDHPFLLQ 276 (297)
T ss_pred HHhcCCcccCcCH--------HHHhhChhhcc
Confidence 9999999999987 55557777764
No 304
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=2e-39 Score=288.00 Aligned_cols=255 Identities=23% Similarity=0.354 Sum_probs=203.8
Q ss_pred CCCCCCCCeeEEeeeccCCeEEEEEEEEc-----cCCcEEEEEEeecCCcc--hHHHHHHHHHHhcCC-CCCeeeeeEEE
Q 022401 17 PIMHDSDRYDFVRDIGSGNFGVARLMRDK-----VTKELVAVKYIERGDKI--DENVQREIINHRSLR-HPNIVRFKEVI 88 (298)
Q Consensus 17 ~~~~~~~~y~~~~~lg~g~~~~vy~~~~~-----~~~~~~aiK~~~~~~~~--~~~~~~e~~~l~~l~-h~~i~~~~~~~ 88 (298)
.+....++|.+.+.||+|+||.||++++. .++..||+|++...... ...+.+|+.++.++. ||||+++++++
T Consensus 31 ~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~ 110 (401)
T cd05107 31 AWEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGAC 110 (401)
T ss_pred cceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEE
Confidence 45666788999999999999999999964 34568999999754322 346788999999997 99999999999
Q ss_pred EeCCeEEEEEeccCCCCHHHHHHhCC------------------------------------------------------
Q 022401 89 LTPTHLAIVMEYASGGELFERICNAG------------------------------------------------------ 114 (298)
Q Consensus 89 ~~~~~~~lv~~~~~~~sL~~~l~~~~------------------------------------------------------ 114 (298)
......++|+||+.+++|.+++....
T Consensus 111 ~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (401)
T cd05107 111 TKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYV 190 (401)
T ss_pred ccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCcc
Confidence 99999999999999999999885431
Q ss_pred --------------------------------------------CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCce
Q 022401 115 --------------------------------------------RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENT 150 (298)
Q Consensus 115 --------------------------------------------~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~ni 150 (298)
.++...+..++.+++.||+|||+.+++|+||+|+||
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~Ni 270 (401)
T cd05107 191 PMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNV 270 (401)
T ss_pred chhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceE
Confidence 256667888999999999999999999999999999
Q ss_pred EeeCCCCCCEEEeecCccccccCCC---CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCC
Q 022401 151 LLDGSPAPRLKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDE 226 (298)
Q Consensus 151 lv~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~ 226 (298)
+++.++. ++|+|||++....... ......++..|+|||.+.+..++.+ +||||||+++++|++ |..||.....
T Consensus 271 Ll~~~~~--~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~DvwslGvil~e~l~~g~~P~~~~~~ 347 (401)
T cd05107 271 LICEGKL--VKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTL-SDVWSFGILLWEIFTLGGTPYPELPM 347 (401)
T ss_pred EEeCCCE--EEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcH-hHHHHHHHHHHHHHHcCCCCCCCCCc
Confidence 9998776 9999999986432211 1122345678999999977776555 999999999999998 8889876554
Q ss_pred chhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchh
Q 022401 227 PKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
.+.... ........+.+..++.++.+++.+||..+|.+||++.++++.
T Consensus 348 ~~~~~~----~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~ 395 (401)
T cd05107 348 NEQFYN----AIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL 395 (401)
T ss_pred hHHHHH----HHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 332222 222233333444578999999999999999999999999864
No 305
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=2e-39 Score=276.59 Aligned_cols=253 Identities=25% Similarity=0.379 Sum_probs=198.8
Q ss_pred CCCeeEEeeeccCCeEEEEEEEE----ccCCcEEEEEEeecCC--cchHHHHHHHHHHhcCCCCCeeeeeEEEEeC--Ce
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRD----KVTKELVAVKYIERGD--KIDENVQREIINHRSLRHPNIVRFKEVILTP--TH 93 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~----~~~~~~~aiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~ 93 (298)
..-|++++.||+|+||.||.++. ..++..|++|.+.... .....+.+|+.++++++|||++++.+++... ..
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (284)
T cd05079 3 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 82 (284)
T ss_pred hhhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCc
Confidence 45589999999999999999984 4568889999986442 2345688999999999999999999998775 57
Q ss_pred EEEEEeccCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCcccccc
Q 022401 94 LAIVMEYASGGELFERICNAG-RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 172 (298)
Q Consensus 94 ~~lv~~~~~~~sL~~~l~~~~-~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~ 172 (298)
.++|+||+++++|.+++.... .++..+++.++.+++.||+|||++|++|+||+|+||+++.++. ++|+|||++....
T Consensus 83 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~--~~l~dfg~~~~~~ 160 (284)
T cd05079 83 IKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQ--VKIGDFGLTKAIE 160 (284)
T ss_pred eEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCC--EEECCCccccccc
Confidence 899999999999999986543 5899999999999999999999999999999999999998877 9999999887443
Q ss_pred CCCC----CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCC-----------CchhHHHHHHHH
Q 022401 173 LHSQ----PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPD-----------EPKDFRKTIQRI 237 (298)
Q Consensus 173 ~~~~----~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~-----------~~~~~~~~~~~~ 237 (298)
.... .....++..|+|||.+.+..++.+ +||||||+++|+++++..|+.... ...........+
T Consensus 161 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~-~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd05079 161 TDKEYYTVKDDLDSPVFWYAPECLIQSKFYIA-SDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVL 239 (284)
T ss_pred cCccceeecCCCCCCccccCHHHhccCCCCcc-ccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHH
Confidence 3221 122345667999999877776665 999999999999999776543211 111111122221
Q ss_pred hhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchh
Q 022401 238 LSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 238 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
......+....+++++.+|+.+||+.||.+|||+.++++.
T Consensus 240 -~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 240 -EEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred -HcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 2222334445588999999999999999999999988864
No 306
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=2.6e-39 Score=273.93 Aligned_cols=243 Identities=25% Similarity=0.332 Sum_probs=193.6
Q ss_pred eeeccCCeEEEEEEEEccCCc--EEEEEEeecC--CcchHHHHHHHHHHhcC-CCCCeeeeeEEEEeCCeEEEEEeccCC
Q 022401 29 RDIGSGNFGVARLMRDKVTKE--LVAVKYIERG--DKIDENVQREIINHRSL-RHPNIVRFKEVILTPTHLAIVMEYASG 103 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~~~~~--~~aiK~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~~~~~~ 103 (298)
+.||+|+||.||++....++. .+++|.+... ......+.+|+.++.++ +|||++++++++...+..++++||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 468999999999999977665 4678877642 23345688899999999 799999999999999999999999999
Q ss_pred CCHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCc
Q 022401 104 GELFERICNAG----------------RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGY 167 (298)
Q Consensus 104 ~sL~~~l~~~~----------------~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~ 167 (298)
++|.+++.... .++..++..++.+++.|++|||+.|++|+||+|+||+++.++. ++|+|||+
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~--~kl~dfgl 158 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYV--AKIADFGL 158 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCe--EEECCCCC
Confidence 99999986532 3788999999999999999999999999999999999998877 99999998
Q ss_pred cccccCCCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCC
Q 022401 168 SKSSVLHSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPD 246 (298)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (298)
+..............+..|+|||.+....++.+ +|+||||+++++|++ |..||...+.. .....+.. ......
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~-~Di~slG~il~el~~~g~~pf~~~~~~----~~~~~~~~-~~~~~~ 232 (270)
T cd05047 159 SRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTN-SDVWSYGVLLWEIVSLGGTPYCGMTCA----ELYEKLPQ-GYRLEK 232 (270)
T ss_pred ccccchhhhccCCCCccccCChHHHccCCCCch-hhHHHHHHHHHHHHcCCCCCccccCHH----HHHHHHhC-CCCCCC
Confidence 753332222222334567999999877666555 999999999999997 99999764432 22222222 222233
Q ss_pred CCCCCHHHHHHHHHhhhhCCCCcccccccchhh
Q 022401 247 TNPISQECRDLISRIFVADPAAVSIFFFPLNMS 279 (298)
Q Consensus 247 ~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~ 279 (298)
....+.++.+++.+||+.||.+|||+.+++...
T Consensus 233 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 265 (270)
T cd05047 233 PLNCDDEVYDLMRQCWREKPYERPSFAQILVSL 265 (270)
T ss_pred CCcCCHHHHHHHHHHcccChhhCCCHHHHHHHH
Confidence 344789999999999999999999999988643
No 307
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=5.5e-39 Score=273.22 Aligned_cols=250 Identities=20% Similarity=0.306 Sum_probs=197.6
Q ss_pred CCCCCeeEEeeeccCCeEEEEEEEEccCCc----EEEEEEeecCC--cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCe
Q 022401 20 HDSDRYDFVRDIGSGNFGVARLMRDKVTKE----LVAVKYIERGD--KIDENVQREIINHRSLRHPNIVRFKEVILTPTH 93 (298)
Q Consensus 20 ~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~----~~aiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 93 (298)
+..++|++.+.||+|+||.||++.+..++. .+++|.+.... .....+..|+..+.++.||||+++++++.. ..
T Consensus 4 ~~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~ 82 (279)
T cd05111 4 LKETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-AS 82 (279)
T ss_pred CCHhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-Cc
Confidence 345789999999999999999999876665 46777765332 223456778888899999999999998754 45
Q ss_pred EEEEEeccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCcccccc
Q 022401 94 LAIVMEYASGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 172 (298)
Q Consensus 94 ~~lv~~~~~~~sL~~~l~~-~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~ 172 (298)
.+++++++++++|.+++.. ...+++..+..++.|++.||+|||+.|++|+||+|+||+++.++. ++|+|||++....
T Consensus 83 ~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~--~kl~Dfg~~~~~~ 160 (279)
T cd05111 83 LQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSI--VQIADFGVADLLY 160 (279)
T ss_pred cEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCc--EEEcCCccceecc
Confidence 7789999999999999975 456899999999999999999999999999999999999998776 9999999986443
Q ss_pred CCCC---CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCC
Q 022401 173 LHSQ---PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTN 248 (298)
Q Consensus 173 ~~~~---~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (298)
.... .....++..|++||.+.+..++.+ +||||||+++|++++ |..||..... .. ...+.......+.+.
T Consensus 161 ~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~-~Dv~slG~il~el~t~g~~p~~~~~~-~~----~~~~~~~~~~~~~~~ 234 (279)
T cd05111 161 PDDKKYFYSEHKTPIKWMALESILFGRYTHQ-SDVWSYGVTVWEMMSYGAEPYAGMRP-HE----VPDLLEKGERLAQPQ 234 (279)
T ss_pred CCCcccccCCCCCcccccCHHHhccCCcCch-hhHHHHHHHHHHHHcCCCCCCCCCCH-HH----HHHHHHCCCcCCCCC
Confidence 2221 122335567999999877777655 999999999999998 9999976543 11 122222233333344
Q ss_pred CCCHHHHHHHHHhhhhCCCCcccccccchh
Q 022401 249 PISQECRDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 249 ~~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
.++.++.+++.+||..||.+|||+.+++..
T Consensus 235 ~~~~~~~~li~~c~~~~p~~Rps~~el~~~ 264 (279)
T cd05111 235 ICTIDVYMVMVKCWMIDENVRPTFKELANE 264 (279)
T ss_pred CCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 478899999999999999999999998764
No 308
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=2.4e-39 Score=274.16 Aligned_cols=246 Identities=22% Similarity=0.320 Sum_probs=194.4
Q ss_pred eeEEeeeccCCeEEEEEEEEccCCc--EEEEEEeecC---CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeC------Ce
Q 022401 25 YDFVRDIGSGNFGVARLMRDKVTKE--LVAVKYIERG---DKIDENVQREIINHRSLRHPNIVRFKEVILTP------TH 93 (298)
Q Consensus 25 y~~~~~lg~g~~~~vy~~~~~~~~~--~~aiK~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~~ 93 (298)
+.+++.||+|+||.||+++...++. .+|+|.+... ....+.+.+|+.++++++|+||+++++++... ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3578999999999999999876654 5899987654 23345678899999999999999999987532 24
Q ss_pred EEEEEeccCCCCHHHHHHh------CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCc
Q 022401 94 LAIVMEYASGGELFERICN------AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGY 167 (298)
Q Consensus 94 ~~lv~~~~~~~sL~~~l~~------~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~ 167 (298)
.+++++|+.+++|.+++.. ...++...+..++.|++.||+|||++|++|+||||+||+++.++. ++|+|||+
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~--~kl~Dfg~ 158 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMN--VCVADFGL 158 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCC--EEECCCCc
Confidence 6899999999999887732 234789999999999999999999999999999999999988877 99999999
Q ss_pred cccccCCC---CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCC
Q 022401 168 SKSSVLHS---QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYS 243 (298)
Q Consensus 168 ~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 243 (298)
+....... .......++.|++||...+..++.+ +||||||+++|++++ |..||...... .....+.... .
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~-~Di~slG~il~el~~~g~~p~~~~~~~----~~~~~~~~~~-~ 232 (272)
T cd05075 159 SKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTK-SDVWSFGVTMWEIATRGQTPYPGVENS----EIYDYLRQGN-R 232 (272)
T ss_pred ccccCcccceecCCcccCCcccCCHHHccCCCcChH-HHHHHHHHHHHHHHcCCCCCCCCCCHH----HHHHHHHcCC-C
Confidence 87543222 1223345678999999877777665 999999999999999 78899764432 2222222222 2
Q ss_pred CCCCCCCCHHHHHHHHHhhhhCCCCcccccccchh
Q 022401 244 VPDTNPISQECRDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 244 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
.+....+++.+.+++.+||+.||++|||+.++++.
T Consensus 233 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 233 LKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 23344578999999999999999999999888864
No 309
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=2.7e-39 Score=271.67 Aligned_cols=241 Identities=26% Similarity=0.386 Sum_probs=197.0
Q ss_pred eeeccCCeEEEEEEEEcc-CCc--EEEEEEeecCCc--chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEeccCC
Q 022401 29 RDIGSGNFGVARLMRDKV-TKE--LVAVKYIERGDK--IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASG 103 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~~-~~~--~~aiK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~~ 103 (298)
+.||+|++|.||++.+.. +++ .+++|.+..... ....+.+|+.++++++||||+++++++.. ..+++++|++++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999999864 333 689998876544 45678899999999999999999999988 889999999999
Q ss_pred CCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC----CC
Q 022401 104 GELFERICNAG--RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS----QP 177 (298)
Q Consensus 104 ~sL~~~l~~~~--~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~----~~ 177 (298)
++|.+.+.+.. .++...++.++.|++.||++||++|++|+||+|+||+++.++. ++|+|||++....... ..
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~--~kl~dfg~~~~~~~~~~~~~~~ 157 (257)
T cd05040 80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDK--VKIGDFGLMRALPQNEDHYVME 157 (257)
T ss_pred CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCE--EEeccccccccccccccceecc
Confidence 99999997764 6899999999999999999999999999999999999998876 9999999886443321 11
Q ss_pred CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHH
Q 022401 178 KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRD 256 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 256 (298)
....++..|+|||.+.+..++.+ +||||||+++++|++ |..||......+. ...+.......+.+...|..+.+
T Consensus 158 ~~~~~~~~y~~pE~~~~~~~~~~-~Di~slG~~l~el~t~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 232 (257)
T cd05040 158 EHLKVPFAWCAPESLRTRTFSHA-SDVWMFGVTLWEMFTYGEEPWAGLSGSQI----LKKIDKEGERLERPEACPQDIYN 232 (257)
T ss_pred cCCCCCceecCHHHhcccCcCch-hhhHHHHHHHHHHHhCCCCCCCCCCHHHH----HHHHHhcCCcCCCCccCCHHHHH
Confidence 22345678999999877777666 999999999999998 9999976654332 22222223333444457899999
Q ss_pred HHHHhhhhCCCCcccccccch
Q 022401 257 LISRIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 257 li~~~l~~dp~~Rps~~~~l~ 277 (298)
++.+||+.+|.+|||+.++++
T Consensus 233 li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 233 VMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred HHHHHCCCCcccCCCHHHHHH
Confidence 999999999999999988875
No 310
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.8e-40 Score=285.78 Aligned_cols=255 Identities=23% Similarity=0.314 Sum_probs=202.6
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeec---CCcchHHHHHHHHHHhcC-CCCCeeeeeEEEEeCCeEEE
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIER---GDKIDENVQREIINHRSL-RHPNIVRFKEVILTPTHLAI 96 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~---~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l 96 (298)
-...|++++.||.||.+.||++.....+ .||+|.+.. +.....-+.+|+..|.+| +|.+|+++++|-..++.+|+
T Consensus 359 kg~~Yeilk~iG~GGSSkV~kV~~s~~~-iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYm 437 (677)
T KOG0596|consen 359 KGREYEILKQIGSGGSSKVFKVLNSDKQ-IYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYM 437 (677)
T ss_pred CcchhhHHHhhcCCCcceeeeeecCCCc-chhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEE
Confidence 4567999999999999999999987555 456665543 445557799999999999 58999999999999999999
Q ss_pred EEeccCCCCHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC
Q 022401 97 VMEYASGGELFERICNAGR-FSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS 175 (298)
Q Consensus 97 v~~~~~~~sL~~~l~~~~~-~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~ 175 (298)
|||+- ..+|...|.+... .+...++.+.+|++.++.++|+.||||.||||.|+++-.+. +||+|||.|.......
T Consensus 438 vmE~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVkG~---LKLIDFGIA~aI~~DT 513 (677)
T KOG0596|consen 438 VMECG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVKGR---LKLIDFGIANAIQPDT 513 (677)
T ss_pred Eeecc-cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEeee---EEeeeechhcccCccc
Confidence 99975 5689888877665 34468899999999999999999999999999999886433 9999999987555443
Q ss_pred ---CCCCCCCCCcccCccccccccCC----------CCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCC
Q 022401 176 ---QPKSTVGTPAYIAPEVLLRHEYD----------GKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQY 242 (298)
Q Consensus 176 ---~~~~~~~~~~~~aPE~~~~~~~~----------~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 242 (298)
......|++.|||||.+.....+ .+++|||||||++|+|+.|..||+... .....+..++..+.
T Consensus 514 TsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~---n~~aKl~aI~~P~~ 590 (677)
T KOG0596|consen 514 TSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII---NQIAKLHAITDPNH 590 (677)
T ss_pred cceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH---HHHHHHHhhcCCCc
Confidence 33567799999999998754332 334999999999999999999998743 23455666666655
Q ss_pred CCCCCCCC-CHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 243 SVPDTNPI-SQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 243 ~~~~~~~~-~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
.++.+.-- +.++.++++.||+.||.+|||+ -.+|+|||++-
T Consensus 591 ~Iefp~~~~~~~li~~mK~CL~rdPkkR~si--------~eLLqhpFl~~ 632 (677)
T KOG0596|consen 591 EIEFPDIPENDELIDVMKCCLARDPKKRWSI--------PELLQHPFLQI 632 (677)
T ss_pred cccccCCCCchHHHHHHHHHHhcCcccCCCc--------HHHhcCccccc
Confidence 33332212 3459999999999999999977 55667888774
No 311
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=5.1e-39 Score=275.67 Aligned_cols=258 Identities=26% Similarity=0.375 Sum_probs=200.7
Q ss_pred CCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc--chHHHHHHHHHHhcC-CCCCeeeeeEEEEeCCeEE
Q 022401 19 MHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK--IDENVQREIINHRSL-RHPNIVRFKEVILTPTHLA 95 (298)
Q Consensus 19 ~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~ 95 (298)
....++|++.+.||+|++|.||++.+..+++.+|+|.+..... ....+..|+.++.+. .||||+++++++......+
T Consensus 11 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~ 90 (296)
T cd06618 11 PADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVF 90 (296)
T ss_pred cCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEE
Confidence 4556899999999999999999999998899999999875432 233455566655555 5999999999999999999
Q ss_pred EEEeccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHhh-cCcEEecCCCCceEeeCCCCCCEEEeecCccccccC
Q 022401 96 IVMEYASGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHA-MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 173 (298)
Q Consensus 96 lv~~~~~~~sL~~~l~~-~~~~~~~~~~~i~~~l~~~l~~Lh~-~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~ 173 (298)
+++|++.+ ++.+++.. ...+++..+..++.+++.|++|||+ .|++|+||+|+||+++.++. ++|+|||++.....
T Consensus 91 ~v~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~--~kL~dfg~~~~~~~ 167 (296)
T cd06618 91 ICMELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGN--VKLCDFGISGRLVD 167 (296)
T ss_pred EEeeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCC--EEECccccchhccC
Confidence 99999854 67666654 4578999999999999999999997 59999999999999998776 99999998865433
Q ss_pred CCCCCCCCCCCcccCcccccccc----CCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhc-CCCCCCCC
Q 022401 174 HSQPKSTVGTPAYIAPEVLLRHE----YDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSV-QYSVPDTN 248 (298)
Q Consensus 174 ~~~~~~~~~~~~~~aPE~~~~~~----~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 248 (298)
........++..|+|||.+.+.. ++. ++|+||||+++|+|++|..||...... .+...++... ....+...
T Consensus 168 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~-~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~ 243 (296)
T cd06618 168 SKAKTRSAGCAAYMAPERIDPPDPNPKYDI-RADVWSLGISLVELATGQFPYKNCKTE---FEVLTKILQEEPPSLPPNE 243 (296)
T ss_pred CCcccCCCCCccccCHhhcCCCCCcccccc-chhHHHHHHHHHHHHhCCCCCCcchhH---HHHHHHHhcCCCCCCCCCC
Confidence 33333345677899999986543 444 499999999999999999999764321 1222222222 22333333
Q ss_pred CCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 249 PISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 249 ~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
.++.++.+|+.+||+.||.+||++ .+++.|||++.
T Consensus 244 ~~~~~l~~li~~~l~~~p~~Rp~~--------~~il~~~~~~~ 278 (296)
T cd06618 244 GFSPDFCSFVDLCLTKDHRKRPKY--------RELLQHPFIRR 278 (296)
T ss_pred CCCHHHHHHHHHHccCChhhCCCH--------HHHhcChhhhc
Confidence 478999999999999999999988 55557777763
No 312
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=1.7e-39 Score=282.60 Aligned_cols=256 Identities=21% Similarity=0.297 Sum_probs=194.5
Q ss_pred eeeccC--CeEEEEEEEEccCCcEEEEEEeecCCc---chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEeccCC
Q 022401 29 RDIGSG--NFGVARLMRDKVTKELVAVKYIERGDK---IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASG 103 (298)
Q Consensus 29 ~~lg~g--~~~~vy~~~~~~~~~~~aiK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~~ 103 (298)
+.||.| ++|.||.+++..+++.||+|+...... ..+.+.+|+.+++.++||||+++++++..+...++|++++.+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 456666 899999999998999999999875432 235678899999999999999999999999999999999999
Q ss_pred CCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCC----
Q 022401 104 GELFERICNAG--RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP---- 177 (298)
Q Consensus 104 ~sL~~~l~~~~--~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~---- 177 (298)
+++.+++.... .+++..+..++.|++.||+|||++|++|+||||+||+++.++. +++.||+.+.........
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 161 (328)
T cd08226 84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGL--VSLSGLSHLYSLVRNGQKAKVV 161 (328)
T ss_pred CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCc--EEEechHHHhhhhccCcccccc
Confidence 99999887643 4889999999999999999999999999999999999998876 999999754322111111
Q ss_pred ----CCCCCCCcccCccccccccC-CCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHh--------------
Q 022401 178 ----KSTVGTPAYIAPEVLLRHEY-DGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRIL-------------- 238 (298)
Q Consensus 178 ----~~~~~~~~~~aPE~~~~~~~-~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~-------------- 238 (298)
....+...|+|||++.+... ...++||||+|+++|++++|..||.................
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (328)
T cd08226 162 YDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEES 241 (328)
T ss_pred ccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhh
Confidence 11223456999999876421 23459999999999999999999987654322211111000
Q ss_pred ---------------------------hcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 239 ---------------------------SVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 239 ---------------------------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
......+.....++.+.+|+++||+.||++|||+ .++++|||+..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta--------~e~l~~~~~~~ 313 (328)
T cd08226 242 RMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSA--------SSLLSHAFFKQ 313 (328)
T ss_pred hhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCH--------HHHhhCHHHHH
Confidence 0000111122356789999999999999999988 55568888876
Q ss_pred hhh
Q 022401 292 ATE 294 (298)
Q Consensus 292 ~~~ 294 (298)
..|
T Consensus 314 ~~~ 316 (328)
T cd08226 314 VKE 316 (328)
T ss_pred HHH
Confidence 554
No 313
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=3.3e-39 Score=276.82 Aligned_cols=253 Identities=24% Similarity=0.368 Sum_probs=198.7
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEcc----------------CCcEEEEEEeecCC--cchHHHHHHHHHHhcCCCCCeee
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDKV----------------TKELVAVKYIERGD--KIDENVQREIINHRSLRHPNIVR 83 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~~----------------~~~~~aiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~ 83 (298)
.++|++.+.||+|+||.||.+++.. ++..+|+|.+.... .....+.+|+.+++.++|+|+++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 3679999999999999999986432 34568999887543 23456889999999999999999
Q ss_pred eeEEEEeCCeEEEEEeccCCCCHHHHHHhCC-----------CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEe
Q 022401 84 FKEVILTPTHLAIVMEYASGGELFERICNAG-----------RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLL 152 (298)
Q Consensus 84 ~~~~~~~~~~~~lv~~~~~~~sL~~~l~~~~-----------~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv 152 (298)
+++++......++++||+.+++|.+++.... .++..++..++.|++.|++|||+.|++|+||+|+||++
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili 163 (296)
T cd05095 84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLV 163 (296)
T ss_pred EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEE
Confidence 9999999999999999999999999986543 35677899999999999999999999999999999999
Q ss_pred eCCCCCCEEEeecCccccccCCCC---CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh--CCCCCCCCCCc
Q 022401 153 DGSPAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV--GGYPFEDPDEP 227 (298)
Q Consensus 153 ~~~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~--g~~pf~~~~~~ 227 (298)
+.++. ++|+|||++........ ......+..|++||...+..++.+ +|+||||+++|+|++ |..||......
T Consensus 164 ~~~~~--~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~-~DiwSlG~~l~el~~~~~~~p~~~~~~~ 240 (296)
T cd05095 164 GKNYT--IKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTA-SDVWAFGVTLWEILTLCKEQPYSQLSDE 240 (296)
T ss_pred cCCCC--EEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccch-hhhhHHHHHHHHHHHhCCCCCccccChH
Confidence 88776 99999998864332211 122233567999998877776555 999999999999998 77888776543
Q ss_pred hhHHHHHHHHhh--cCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccch
Q 022401 228 KDFRKTIQRILS--VQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 228 ~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~ 277 (298)
+........... .....+.+..++..+.+++.+||+.||.+||++.+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 241 QVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred HHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 332222111111 11123334457899999999999999999999988774
No 314
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=3.8e-39 Score=272.96 Aligned_cols=246 Identities=21% Similarity=0.305 Sum_probs=195.8
Q ss_pred eeEEeeeccCCeEEEEEEEEccC---CcEEEEEEeecCCc---chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCe-----
Q 022401 25 YDFVRDIGSGNFGVARLMRDKVT---KELVAVKYIERGDK---IDENVQREIINHRSLRHPNIVRFKEVILTPTH----- 93 (298)
Q Consensus 25 y~~~~~lg~g~~~~vy~~~~~~~---~~~~aiK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----- 93 (298)
|++.+.||+|+||.||.|....+ +..+|+|.+..... ....+.+|+..++.++|||++++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 67899999999999999987643 47899999875432 23567889999999999999999998866543
Q ss_pred -EEEEEeccCCCCHHHHHHhC------CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecC
Q 022401 94 -LAIVMEYASGGELFERICNA------GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFG 166 (298)
Q Consensus 94 -~~lv~~~~~~~sL~~~l~~~------~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~ 166 (298)
.+++++|+.+++|...+... ..+++..+..++.|++.||.|||+.+++|+||+|+||+++.++. ++|+|||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~--~kl~dfg 158 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMT--VCVADFG 158 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCe--EEECCcc
Confidence 79999999999998887432 35889999999999999999999999999999999999998876 9999999
Q ss_pred ccccccCCCC---CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCC
Q 022401 167 YSKSSVLHSQ---PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQY 242 (298)
Q Consensus 167 ~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~ 242 (298)
++........ ......+..|++||.+.+..++.+ +||||||+++|+|++ |..||......+ ....+....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~-~Dv~SlG~il~el~~~g~~p~~~~~~~~----~~~~~~~~~- 232 (273)
T cd05035 159 LSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSK-SDVWAFGVTMWEIATRGQTPYPGVENHE----IYDYLRHGN- 232 (273)
T ss_pred ceeeccccccccccccccCCccccCHhhcccCCCCcc-cchHHHHHHHHHHHhCCCCCCCCCCHHH----HHHHHHcCC-
Confidence 9864432221 112234567999999876666555 999999999999999 888987655422 222322222
Q ss_pred CCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchh
Q 022401 243 SVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 243 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
....+...+.++.+++.+||+.||.+|||+.++++.
T Consensus 233 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 233 RLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred CCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 223344578999999999999999999999888753
No 315
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-40 Score=265.03 Aligned_cols=256 Identities=26% Similarity=0.378 Sum_probs=208.5
Q ss_pred CCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcc--hHHHHHHHHHHhcC-CCCCeeeeeEEEEeCCeEEE
Q 022401 20 HDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKI--DENVQREIINHRSL-RHPNIVRFKEVILTPTHLAI 96 (298)
Q Consensus 20 ~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l 96 (298)
.+.++.+++..||.|..|+|++++.+.+|...|||+..+.... .+++...+.++..- .+|+|+++.|+|..+..+++
T Consensus 89 ~dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~I 168 (391)
T KOG0983|consen 89 ADINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFI 168 (391)
T ss_pred cChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHH
Confidence 4567788999999999999999999999999999998775432 34455555555444 58999999999999999999
Q ss_pred EEeccCCCCHHHHH-HhCCCCCHHHHHHHHHHHHHHHHHHh-hcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC
Q 022401 97 VMEYASGGELFERI-CNAGRFSEDEARFFFQQLISGVSYCH-AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH 174 (298)
Q Consensus 97 v~~~~~~~sL~~~l-~~~~~~~~~~~~~i~~~l~~~l~~Lh-~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~ 174 (298)
.||.|.. -+..++ ....++++..+-.+...++.||.||- +.|++|||+||+|||+|..|+ +||+|||.+.+....
T Consensus 169 cMelMs~-C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~Gn--iKlCDFGIsGrlvdS 245 (391)
T KOG0983|consen 169 CMELMST-CAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGN--IKLCDFGISGRLVDS 245 (391)
T ss_pred HHHHHHH-HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCC--EEeecccccceeecc
Confidence 9998843 344444 34567899999999999999999997 568999999999999999998 999999999888877
Q ss_pred CCCCCCCCCCcccCccccccc---cCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHh-hcCCCCCCCCCC
Q 022401 175 SQPKSTVGTPAYIAPEVLLRH---EYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRIL-SVQYSVPDTNPI 250 (298)
Q Consensus 175 ~~~~~~~~~~~~~aPE~~~~~---~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 250 (298)
.......|++-|||||.+.-. .|+.+ +||||||+.++|++||+.||...+.+ + +.+.++. +.++.++.....
T Consensus 246 kAhtrsAGC~~YMaPERidp~~~~kYDiR-aDVWSlGITlveLaTg~yPy~~c~td--F-e~ltkvln~ePP~L~~~~gF 321 (391)
T KOG0983|consen 246 KAHTRSAGCAAYMAPERIDPPDKPKYDIR-ADVWSLGITLVELATGQYPYKGCKTD--F-EVLTKVLNEEPPLLPGHMGF 321 (391)
T ss_pred cccccccCCccccCccccCCCCCCccchh-hhhhhhccchhhhhcccCCCCCCCcc--H-HHHHHHHhcCCCCCCcccCc
Confidence 777888899999999988643 56666 99999999999999999999986543 2 2233333 455566666678
Q ss_pred CHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhh
Q 022401 251 SQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMF 290 (298)
Q Consensus 251 ~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~ 290 (298)
++.+++|+..||.+|+.+||.+ .++++|||+.
T Consensus 322 Sp~F~~fv~~CL~kd~r~RP~Y--------~~Ll~h~Fi~ 353 (391)
T KOG0983|consen 322 SPDFQSFVKDCLTKDHRKRPKY--------NKLLEHPFIK 353 (391)
T ss_pred CHHHHHHHHHHhhcCcccCcch--------HHHhcCccee
Confidence 9999999999999999999977 4555666654
No 316
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=5.2e-39 Score=269.71 Aligned_cols=245 Identities=27% Similarity=0.390 Sum_probs=201.6
Q ss_pred eeEEeeeccCCeEEEEEEEEccCC----cEEEEEEeecCCc--chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEE
Q 022401 25 YDFVRDIGSGNFGVARLMRDKVTK----ELVAVKYIERGDK--IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 25 y~~~~~lg~g~~~~vy~~~~~~~~----~~~aiK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
+++.+.||.|+||.||.+.+...+ ..+++|.+..... ....+.+|+..+++++|+|++++++++.+.+..++++
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 467899999999999999998655 8899999876543 4567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCC
Q 022401 99 EYASGGELFERICNAGR--FSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ 176 (298)
Q Consensus 99 ~~~~~~sL~~~l~~~~~--~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~ 176 (298)
+++++++|.+.+..... +++..+..++.|++.|+.+||+.|++|+||+|+||++++++. ++|+|||++........
T Consensus 81 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~--~~l~dfg~~~~~~~~~~ 158 (258)
T smart00219 81 EYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLV--VKISDFGLSRDLYDDDY 158 (258)
T ss_pred eccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCe--EEEcccCCceecccccc
Confidence 99999999999876554 899999999999999999999999999999999999998886 99999999864443321
Q ss_pred CC--CCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHH
Q 022401 177 PK--STVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQE 253 (298)
Q Consensus 177 ~~--~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (298)
.. ...++..|+|||.+.+..++.+ +|+||+|+++++|++ |..||...... .....+.... ........+.+
T Consensus 159 ~~~~~~~~~~~y~~Pe~~~~~~~~~~-~Di~slG~i~~~l~~~g~~p~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~ 232 (258)
T smart00219 159 YKKKGGKLPIRWMAPESLKDGKFTSK-SDVWSFGVLLWEIFTLGESPYPGMSNE----EVLEYLKKGY-RLPKPENCPPE 232 (258)
T ss_pred cccccCCCcccccChHHhccCCCCcc-hhHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHHHhcCC-CCCCCCcCCHH
Confidence 11 2235678999999866666555 999999999999998 78888764432 2222332222 22334447899
Q ss_pred HHHHHHHhhhhCCCCcccccccch
Q 022401 254 CRDLISRIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 254 l~~li~~~l~~dp~~Rps~~~~l~ 277 (298)
+.+++.+||+.||.+|||+.++++
T Consensus 233 ~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 233 IYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred HHHHHHHHCcCChhhCcCHHHHHh
Confidence 999999999999999999988875
No 317
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=2.1e-39 Score=275.74 Aligned_cols=254 Identities=30% Similarity=0.448 Sum_probs=203.5
Q ss_pred eeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC---CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEecc
Q 022401 25 YDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG---DKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYA 101 (298)
Q Consensus 25 y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~ 101 (298)
|++.+.||+|++|.||.+....+++.+++|.+... ....+.+..|+.++++++|+|++++++++.+....++|+|++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 67889999999999999999988999999998764 333456778999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC-CCCC
Q 022401 102 SGGELFERICNA-GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-QPKS 179 (298)
Q Consensus 102 ~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~-~~~~ 179 (298)
++ +|.+++... ..+++..+..++.+++.+|++||+.|++|+||+|+||+++.++. ++|+|||.+....... ....
T Consensus 81 ~~-~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~--~~l~d~g~~~~~~~~~~~~~~ 157 (282)
T cd07829 81 DM-DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGV--LKLADFGLARAFGIPLRTYTH 157 (282)
T ss_pred Cc-CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCC--EEEecCCcccccCCCccccCc
Confidence 74 899999776 57999999999999999999999999999999999999998877 9999999886443322 2223
Q ss_pred CCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhc--------------CCCC-
Q 022401 180 TVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSV--------------QYSV- 244 (298)
Q Consensus 180 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~--------------~~~~- 244 (298)
...+..|+|||.+.+....+.++|+||||++++++++|..||...+..+.+.......... ....
T Consensus 158 ~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (282)
T cd07829 158 EVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFP 237 (282)
T ss_pred cccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccccccccc
Confidence 3456779999998776333445999999999999999999998866544433322211100 0000
Q ss_pred --------CCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 245 --------PDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 245 --------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
......+.++.+++.+||..||.+||++ .++++|||+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~--------~~~l~~p~~ 282 (282)
T cd07829 238 KFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISA--------KEALKHPYF 282 (282)
T ss_pred ccCccchHHhcccccHHHHHHHHHhhccCcccCCCH--------HHHhhCcCC
Confidence 0011247889999999999999999987 666688885
No 318
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=2.4e-39 Score=282.66 Aligned_cols=260 Identities=29% Similarity=0.402 Sum_probs=201.3
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC---CcchHHHHHHHHHHhcC-CCCCeeeeeEEEEeC--CeE
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG---DKIDENVQREIINHRSL-RHPNIVRFKEVILTP--THL 94 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~--~~~ 94 (298)
..++|++.+.||+|++|.||++.+..+++.+++|.+... ......+.+|+.+++++ +||||+++++++... ..+
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 457899999999999999999999888999999987542 22334567899999999 999999999998653 468
Q ss_pred EEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC
Q 022401 95 AIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH 174 (298)
Q Consensus 95 ~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~ 174 (298)
++|+|++.+ +|...+..+ .+++...+.++.|++.||.|||+.|++|+||+|+||+++.++. ++|+|||++......
T Consensus 85 ~lv~e~~~~-~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~--~kl~d~g~~~~~~~~ 160 (337)
T cd07852 85 YLVFEYMET-DLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCR--VKLADFGLARSLSEL 160 (337)
T ss_pred EEEeccccc-CHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCc--EEEeeccchhccccc
Confidence 999999974 888888665 7888999999999999999999999999999999999998887 999999988644332
Q ss_pred CC------CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHH-----------
Q 022401 175 SQ------PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRI----------- 237 (298)
Q Consensus 175 ~~------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~----------- 237 (298)
.. .....++..|+|||.+.+......++|+||+|+++|+|++|..||......+.........
T Consensus 161 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (337)
T cd07852 161 EENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESI 240 (337)
T ss_pred cccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHH
Confidence 21 1123467789999988765544556999999999999999999997755443322221111
Q ss_pred --------hh----cCCC--CCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 238 --------LS----VQYS--VPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 238 --------~~----~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
.. .... ......++.++.++|.+||+.||.+|||+.+++ +|||+...
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il--------~~~~~~~~ 301 (337)
T cd07852 241 KSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEAL--------EHPYVAQF 301 (337)
T ss_pred HhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHh--------hChhhhhh
Confidence 00 0000 011123688999999999999999999885554 66776544
No 319
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7e-39 Score=279.43 Aligned_cols=257 Identities=22% Similarity=0.308 Sum_probs=203.1
Q ss_pred CCCCCCeeEEeeeccCCeEEEEEEEEccC-------CcEEEEEEeecCC--cchHHHHHHHHHHhcC-CCCCeeeeeEEE
Q 022401 19 MHDSDRYDFVRDIGSGNFGVARLMRDKVT-------KELVAVKYIERGD--KIDENVQREIINHRSL-RHPNIVRFKEVI 88 (298)
Q Consensus 19 ~~~~~~y~~~~~lg~g~~~~vy~~~~~~~-------~~~~aiK~~~~~~--~~~~~~~~e~~~l~~l-~h~~i~~~~~~~ 88 (298)
.+...+|++++.||+|+||.||.+++... +..+++|.+.... .....+.+|+.+++++ +||||+++++++
T Consensus 8 ~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 87 (334)
T cd05100 8 ELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGAC 87 (334)
T ss_pred ccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEE
Confidence 34456899999999999999999986432 2368999876532 2345688999999999 799999999999
Q ss_pred EeCCeEEEEEeccCCCCHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEe
Q 022401 89 LTPTHLAIVMEYASGGELFERICNAG----------------RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLL 152 (298)
Q Consensus 89 ~~~~~~~lv~~~~~~~sL~~~l~~~~----------------~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv 152 (298)
......++++||+++++|.+++.... .++..++..++.|++.||.|||++|++|+||+|+||++
T Consensus 88 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill 167 (334)
T cd05100 88 TQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLV 167 (334)
T ss_pred ccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEE
Confidence 99999999999999999999986532 36778889999999999999999999999999999999
Q ss_pred eCCCCCCEEEeecCccccccCCC---CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCch
Q 022401 153 DGSPAPRLKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPK 228 (298)
Q Consensus 153 ~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~ 228 (298)
+.++. ++|+|||++....... ......++..|+|||.+.+..++.+ +||||||+++|+|++ |..||...+..+
T Consensus 168 ~~~~~--~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~el~~~g~~p~~~~~~~~ 244 (334)
T cd05100 168 TEDNV--MKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQ-SDVWSFGVLLWEIFTLGGSPYPGIPVEE 244 (334)
T ss_pred cCCCc--EEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCch-hhhHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence 98877 9999999886433221 1122223467999999987777666 999999999999998 888887654322
Q ss_pred hHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHH
Q 022401 229 DFRKTIQRILSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLL 283 (298)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~ 283 (298)
....+... .....+...+.++.+++.+||+.+|.+|||+.++++......
T Consensus 245 ----~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~ 294 (334)
T cd05100 245 ----LFKLLKEG-HRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVL 294 (334)
T ss_pred ----HHHHHHcC-CCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence 22222222 222334457899999999999999999999999997654443
No 320
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=2.6e-39 Score=283.05 Aligned_cols=258 Identities=24% Similarity=0.346 Sum_probs=201.5
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC---cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCC-----
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD---KIDENVQREIINHRSLRHPNIVRFKEVILTPT----- 92 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 92 (298)
..++|++.+.||+|++|.||.+.+..++..||+|++.... .....+.+|+.++++++||||+++++++..+.
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 3568999999999999999999999899999999886432 22346778999999999999999999987543
Q ss_pred -eEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccc
Q 022401 93 -HLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSS 171 (298)
Q Consensus 93 -~~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~ 171 (298)
.+++|++++ +++|..++. ...+++..++.++.|++.|++|||+.|++|+||+|+||+++.++. ++|+|||++...
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~-~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~--~kl~dfg~~~~~ 168 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMK-HEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCE--LKILDFGLARQT 168 (343)
T ss_pred ceEEEEEecC-CCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC--EEEeeccccccc
Confidence 468999998 678887775 456899999999999999999999999999999999999998877 999999988644
Q ss_pred cCCCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhh------------
Q 022401 172 VLHSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILS------------ 239 (298)
Q Consensus 172 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~------------ 239 (298)
.. ......+++.|++||.+.+....+.++|+||+|++++++++|..||...+......+.......
T Consensus 169 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (343)
T cd07880 169 DS--EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSE 246 (343)
T ss_pred cc--CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcch
Confidence 32 2223456788999999876443455599999999999999999999876543332222211000
Q ss_pred -------cCCCC------CCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 240 -------VQYSV------PDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 240 -------~~~~~------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
..... .....++.++.++|.+||+.||.+|||+ .+++.|||+...
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~--------~~~l~~~~~~~~ 304 (343)
T cd07880 247 DAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITA--------AEALAHPYFEEF 304 (343)
T ss_pred hHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCH--------HHHhcCccHhhh
Confidence 00000 0112467889999999999999999987 455567777643
No 321
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=3.2e-39 Score=274.99 Aligned_cols=254 Identities=30% Similarity=0.435 Sum_probs=200.7
Q ss_pred eeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcc--hHHHHHHHHHHhcCC-CCCeeeeeEEEEeCCeEEEEEecc
Q 022401 25 YDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKI--DENVQREIINHRSLR-HPNIVRFKEVILTPTHLAIVMEYA 101 (298)
Q Consensus 25 y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~~~~ 101 (298)
|++.+.||+|++|.||+|....+++.+++|.+...... .....+|+..+++++ |+|++++++++.++...++|+|++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 78899999999999999999888999999988654332 233456889999998 999999999999999999999999
Q ss_pred CCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCCCC
Q 022401 102 SGGELFERICNAG--RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS 179 (298)
Q Consensus 102 ~~~sL~~~l~~~~--~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~~~ 179 (298)
+++|.+.+.... .++..++..++.|++.+|.|||++|++|+||+|.||++++++. ++|+|||.+...........
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~--~~l~d~~~~~~~~~~~~~~~ 157 (283)
T cd07830 81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEV--VKIADFGLAREIRSRPPYTD 157 (283)
T ss_pred -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCC--EEEeecccceeccCCCCcCC
Confidence 778888887654 7899999999999999999999999999999999999998887 99999998875544433344
Q ss_pred CCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhh---------------cCCCC
Q 022401 180 TVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILS---------------VQYSV 244 (298)
Q Consensus 180 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~---------------~~~~~ 244 (298)
..++..|+|||.+........++|+||||++++++++|..||......+.+......+.. .....
T Consensus 158 ~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd07830 158 YVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRF 237 (283)
T ss_pred CCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccc
Confidence 557788999998865554455599999999999999999999776654433322211000 00000
Q ss_pred C---------CCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 245 P---------DTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 245 ~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
+ .....+.++.+++++||+.||++|||+. +++.|||+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~--------ei~~~~~~ 283 (283)
T cd07830 238 PQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTAS--------QALQHPYF 283 (283)
T ss_pred cccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHH--------HHhhCCCC
Confidence 0 0112368899999999999999999885 45567775
No 322
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=5.8e-39 Score=269.26 Aligned_cols=245 Identities=25% Similarity=0.352 Sum_probs=198.2
Q ss_pred CCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEE
Q 022401 19 MHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 19 ~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
+...++|++.+.||+|+||.||.+.. +++.+++|.+.... ....+.+|+.++++++|||++++.+++..+ ..++++
T Consensus 2 ~~~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~ 77 (254)
T cd05083 2 LLNLQKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV-TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVM 77 (254)
T ss_pred cccHHHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc-hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEE
Confidence 34557899999999999999998864 57789999886543 346788999999999999999999998654 478999
Q ss_pred eccCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCC
Q 022401 99 EYASGGELFERICNAG--RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ 176 (298)
Q Consensus 99 ~~~~~~sL~~~l~~~~--~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~ 176 (298)
||+.+++|.+++.... .++...+..++.|++.|+.+||+.|++||||+|+||+++.++. ++|+|||++......
T Consensus 78 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~--~kl~Dfg~~~~~~~~-- 153 (254)
T cd05083 78 ELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGV--AKVSDFGLARVGSMG-- 153 (254)
T ss_pred ECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCc--EEECCCccceecccc--
Confidence 9999999999987544 4789999999999999999999999999999999999998876 999999987643221
Q ss_pred CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHH
Q 022401 177 PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECR 255 (298)
Q Consensus 177 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 255 (298)
.........|+|||.+.+..++.+ +|+||||+++|+|++ |..||......+ ....+. ..........++.++.
T Consensus 154 ~~~~~~~~~y~~pe~~~~~~~~~~-~Dv~slG~~l~el~~~g~~p~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~ 227 (254)
T cd05083 154 VDNSKLPVKWTAPEALKHKKFSSK-SDVWSYGVLLWEVFSYGRAPYPKMSLKE----VKECVE-KGYRMEPPEGCPADVY 227 (254)
T ss_pred CCCCCCCceecCHHHhccCCcCch-hhHHHHHHHHHHHHhCCCCCCccCCHHH----HHHHHh-CCCCCCCCCcCCHHHH
Confidence 122334567999999877776655 999999999999997 899997755322 222222 2222233445789999
Q ss_pred HHHHHhhhhCCCCcccccccch
Q 022401 256 DLISRIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 256 ~li~~~l~~dp~~Rps~~~~l~ 277 (298)
+++.+||+.+|..||++.+++.
T Consensus 228 ~li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 228 VLMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred HHHHHHcCCChhhCcCHHHHHH
Confidence 9999999999999999988875
No 323
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1e-38 Score=268.35 Aligned_cols=239 Identities=25% Similarity=0.350 Sum_probs=189.8
Q ss_pred eeccCCeEEEEEEEEc--cCCcEEEEEEeecCCc--chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEeccCCCC
Q 022401 30 DIGSGNFGVARLMRDK--VTKELVAVKYIERGDK--IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGE 105 (298)
Q Consensus 30 ~lg~g~~~~vy~~~~~--~~~~~~aiK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~~~s 105 (298)
.||+|+||.||.+... ..+..+|+|++..... ..+.+.+|+.++++++||||+++++++. ....++|+||+++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 4899999999998764 3455799998865432 2356889999999999999999999875 457899999999999
Q ss_pred HHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCC----CCCC
Q 022401 106 LFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ----PKST 180 (298)
Q Consensus 106 L~~~l~~-~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~----~~~~ 180 (298)
|.+++.. ...+++..++.++.|++.|+.|||++|++|+||+|+||+++.++. ++|+|||++........ ....
T Consensus 81 L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~--~kl~dfg~~~~~~~~~~~~~~~~~~ 158 (257)
T cd05115 81 LNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHY--AKISDFGLSKALGADDSYYKARSAG 158 (257)
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCc--EEeccCCccccccCCccceeccCCC
Confidence 9998864 457899999999999999999999999999999999999998877 99999998864322211 1112
Q ss_pred CCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHH
Q 022401 181 VGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLIS 259 (298)
Q Consensus 181 ~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (298)
.++..|+|||.+....++.+ +||||||+++|++++ |..||......+ ....+..+ .....+...++++.+++.
T Consensus 159 ~~~~~y~aPE~~~~~~~~~~-~Di~slG~~l~el~~~g~~p~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~l~~li~ 232 (257)
T cd05115 159 KWPLKWYAPECINFRKFSSR-SDVWSYGITMWEAFSYGQKPYKKMKGPE----VMSFIEQG-KRLDCPAECPPEMYALMK 232 (257)
T ss_pred CCCcccCCHHHHccCCCCch-hhHHHHHHHHHHHhcCCCCCcCcCCHHH----HHHHHHCC-CCCCCCCCCCHHHHHHHH
Confidence 23467999999877666555 999999999999996 999998765422 22222222 222334457899999999
Q ss_pred HhhhhCCCCcccccccch
Q 022401 260 RIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 260 ~~l~~dp~~Rps~~~~l~ 277 (298)
+||+.||++||++.++.+
T Consensus 233 ~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 233 DCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred HHcCCChhhCcCHHHHHH
Confidence 999999999999988764
No 324
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=1.6e-38 Score=274.74 Aligned_cols=250 Identities=26% Similarity=0.396 Sum_probs=199.5
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc----chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEe
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK----IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVME 99 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~ 99 (298)
.|...+.||+|++|.||++.+..++..+++|.+..... ....+.+|+.+++.++|||++++++++.+....++|+|
T Consensus 22 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 101 (313)
T cd06633 22 IFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVME 101 (313)
T ss_pred HhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEe
Confidence 47778889999999999999988999999999875322 22457789999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCCC
Q 022401 100 YASGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK 178 (298)
Q Consensus 100 ~~~~~sL~~~l~~-~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~~ 178 (298)
|+.+ ++.+.+.. ..++++.++..++.|++.++.|||+.|++|+||+|+||+++.++. ++|+|||++.... ...
T Consensus 102 ~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~--~kL~dfg~~~~~~---~~~ 175 (313)
T cd06633 102 YCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQ--VKLADFGSASKSS---PAN 175 (313)
T ss_pred cCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCC--EEEeecCCCcccC---CCC
Confidence 9965 66666644 456899999999999999999999999999999999999998877 9999999875322 223
Q ss_pred CCCCCCcccCcccccc---ccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHH
Q 022401 179 STVGTPAYIAPEVLLR---HEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECR 255 (298)
Q Consensus 179 ~~~~~~~~~aPE~~~~---~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 255 (298)
...++..|+|||.+.. ..++. ++|+||||+++|+|++|..||...+...... .+............++.++.
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~~-~sDv~slGvil~el~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~ 250 (313)
T cd06633 176 SFVGTPYWMAPEVILAMDEGQYDG-KVDVWSLGITCIELAERKPPLFNMNAMSALY----HIAQNDSPTLQSNEWTDSFR 250 (313)
T ss_pred CccccccccChhhccccCCCCCCc-hhhHHHHHHHHHHHHhCCCCCCCCChHHHHH----HHHhcCCCCCCccccCHHHH
Confidence 4457788999999742 33444 4999999999999999999997755422222 22222222222334678999
Q ss_pred HHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 256 DLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 256 ~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
+|+.+||+.+|.+||++ .+++.|||+...
T Consensus 251 ~li~~~l~~~P~~Rp~~--------~~~l~~~~~~~~ 279 (313)
T cd06633 251 GFVDYCLQKIPQERPAS--------AELLRHDFVRRD 279 (313)
T ss_pred HHHHHHccCChhhCcCH--------HHHhcCcccCCC
Confidence 99999999999999987 555678887643
No 325
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.1e-38 Score=269.98 Aligned_cols=251 Identities=24% Similarity=0.307 Sum_probs=200.6
Q ss_pred CCCCCeeEEeeeccCCeEEEEEEEEccC---CcEEEEEEeecCC--cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeE
Q 022401 20 HDSDRYDFVRDIGSGNFGVARLMRDKVT---KELVAVKYIERGD--KIDENVQREIINHRSLRHPNIVRFKEVILTPTHL 94 (298)
Q Consensus 20 ~~~~~y~~~~~lg~g~~~~vy~~~~~~~---~~~~aiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 94 (298)
...++|.+.+.||+|++|.||.+.+... ...+++|.+.... ...+.+.+|+.++++++|||++++++++.+ ...
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~ 81 (270)
T cd05056 3 IQREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPV 81 (270)
T ss_pred echhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCc
Confidence 3456899999999999999999987543 4468999876543 334578899999999999999999999865 456
Q ss_pred EEEEeccCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccC
Q 022401 95 AIVMEYASGGELFERICNAG-RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 173 (298)
Q Consensus 95 ~lv~~~~~~~sL~~~l~~~~-~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~ 173 (298)
++|+|++++++|.+++.... .++...++.++.+++.||+|||+.|++|+||+|+||+++.++. ++|+|||++.....
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~--~~l~d~g~~~~~~~ 159 (270)
T cd05056 82 WIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDC--VKLGDFGLSRYLED 159 (270)
T ss_pred EEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCC--eEEccCceeeeccc
Confidence 79999999999999997644 5899999999999999999999999999999999999998877 99999998764332
Q ss_pred CCCC--CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCC
Q 022401 174 HSQP--KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPI 250 (298)
Q Consensus 174 ~~~~--~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (298)
.... ....+...|+|||.+....++.+ +||||||++++++++ |..||......+.. ..+.. ....+.+..+
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~il~el~~~g~~pf~~~~~~~~~----~~~~~-~~~~~~~~~~ 233 (270)
T cd05056 160 ESYYKASKGKLPIKWMAPESINFRRFTSA-SDVWMFGVCMWEILMLGVKPFQGVKNNDVI----GRIEN-GERLPMPPNC 233 (270)
T ss_pred ccceecCCCCccccccChhhhccCCCCch-hhhHHHHHHHHHHHHcCCCCCCCCCHHHHH----HHHHc-CCcCCCCCCC
Confidence 2211 12223457999999877766655 999999999999986 99999876543322 22222 2233444567
Q ss_pred CHHHHHHHHHhhhhCCCCcccccccchhh
Q 022401 251 SQECRDLISRIFVADPAAVSIFFFPLNMS 279 (298)
Q Consensus 251 ~~~l~~li~~~l~~dp~~Rps~~~~l~~~ 279 (298)
|.++.+++.+||+.+|.+|||+.+++...
T Consensus 234 ~~~~~~li~~~l~~~P~~Rpt~~~~~~~l 262 (270)
T cd05056 234 PPTLYSLMTKCWAYDPSKRPRFTELKAQL 262 (270)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 89999999999999999999998888644
No 326
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=1.9e-38 Score=274.72 Aligned_cols=243 Identities=28% Similarity=0.418 Sum_probs=195.7
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc----chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEE
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK----IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
..|+..+.||+|+||.||++++..++..+++|.+..... ....+.+|+.++++++|||++++++++..+...++|+
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 104 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVM 104 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEE
Confidence 458999999999999999999988899999999875422 2345778999999999999999999999999999999
Q ss_pred eccCCCCHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCC
Q 022401 99 EYASGGELFERIC-NAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP 177 (298)
Q Consensus 99 ~~~~~~sL~~~l~-~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~ 177 (298)
||+.+ ++.+.+. ...++++.++..++.+++.|+.+||+.|++|+||+|+||+++.++. ++|+|||++.... ..
T Consensus 105 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~--~kl~dfg~~~~~~---~~ 178 (317)
T cd06635 105 EYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQ--VKLADFGSASIAS---PA 178 (317)
T ss_pred eCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCC--EEEecCCCccccC---Cc
Confidence 99976 6666664 4556899999999999999999999999999999999999988877 9999999875332 22
Q ss_pred CCCCCCCcccCcccccc---ccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHH
Q 022401 178 KSTVGTPAYIAPEVLLR---HEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQEC 254 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~---~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (298)
....++..|+|||.+.. ...+. ++|+||+|+++|+|++|..||........ ...+............+++.+
T Consensus 179 ~~~~~~~~y~aPE~~~~~~~~~~~~-~~Dv~slGvil~el~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l 253 (317)
T cd06635 179 NSFVGTPYWMAPEVILAMDEGQYDG-KVDVWSLGITCIELAERKPPLFNMNAMSA----LYHIAQNESPTLQSNEWSDYF 253 (317)
T ss_pred ccccCCccccChhhhhcCCCCCCCc-cccHHHHHHHHHHHHhCCCCCCCccHHHH----HHHHHhccCCCCCCccccHHH
Confidence 34457788999998742 33444 49999999999999999999877543222 222222222222333478899
Q ss_pred HHHHHHhhhhCCCCcccccccc
Q 022401 255 RDLISRIFVADPAAVSIFFFPL 276 (298)
Q Consensus 255 ~~li~~~l~~dp~~Rps~~~~l 276 (298)
.+++.+||+.+|.+||++.+++
T Consensus 254 ~~li~~~l~~~p~~Rpt~~~il 275 (317)
T cd06635 254 RNFVDSCLQKIPQDRPTSEELL 275 (317)
T ss_pred HHHHHHHccCCcccCcCHHHHH
Confidence 9999999999999999885554
No 327
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.6e-38 Score=270.25 Aligned_cols=249 Identities=22% Similarity=0.339 Sum_probs=200.7
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccCCc----EEEEEEeecCCc--chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeE
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVTKE----LVAVKYIERGDK--IDENVQREIINHRSLRHPNIVRFKEVILTPTHL 94 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~----~~aiK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 94 (298)
..++|++.+.||+|+||.||++....++. .+++|....... ....+.+|+.++++++|||++++++++.. ...
T Consensus 5 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 83 (279)
T cd05057 5 KETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQV 83 (279)
T ss_pred CHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-Cce
Confidence 45789999999999999999999865554 588887765432 34567889999999999999999999877 788
Q ss_pred EEEEeccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccC
Q 022401 95 AIVMEYASGGELFERICNA-GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 173 (298)
Q Consensus 95 ~lv~~~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~ 173 (298)
++++|++.+++|.+.+... ..+++..+..++.|++.|++|||++|++|+||+|+||+++.++. ++|+|||++.....
T Consensus 84 ~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~--~kL~dfg~~~~~~~ 161 (279)
T cd05057 84 QLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQH--VKITDFGLAKLLDV 161 (279)
T ss_pred EEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCe--EEECCCcccccccC
Confidence 9999999999999998764 46899999999999999999999999999999999999988776 99999998864432
Q ss_pred CCCCC---CCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCC
Q 022401 174 HSQPK---STVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNP 249 (298)
Q Consensus 174 ~~~~~---~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (298)
..... ....+..|+|||.+....++.+ +|+||+|++++++++ |..||......+ ....+.. ....+.+..
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~-~Di~slG~~l~el~~~g~~p~~~~~~~~----~~~~~~~-~~~~~~~~~ 235 (279)
T cd05057 162 DEKEYHAEGGKVPIKWMALESILHRIYTHK-SDVWSYGVTVWELMTFGAKPYEGIPAVE----IPDLLEK-GERLPQPPI 235 (279)
T ss_pred cccceecCCCcccccccCHHHhhcCCcCch-hhHHHHHHHHHHHhcCCCCCCCCCCHHH----HHHHHhC-CCCCCCCCC
Confidence 22211 1223457999999876666655 999999999999998 999998754322 2222222 223344444
Q ss_pred CCHHHHHHHHHhhhhCCCCcccccccchh
Q 022401 250 ISQECRDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 250 ~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
.+.++.+++.+||..||..||++.++++.
T Consensus 236 ~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~ 264 (279)
T cd05057 236 CTIDVYMVLVKCWMIDAESRPTFKELINE 264 (279)
T ss_pred CCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 78899999999999999999999888753
No 328
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=5.9e-39 Score=280.81 Aligned_cols=254 Identities=21% Similarity=0.344 Sum_probs=198.5
Q ss_pred CCCCCCeeEEeeeccCCeEEEEEEEEc-----cCCcEEEEEEeecCCc--chHHHHHHHHHHhcC-CCCCeeeeeEEEEe
Q 022401 19 MHDSDRYDFVRDIGSGNFGVARLMRDK-----VTKELVAVKYIERGDK--IDENVQREIINHRSL-RHPNIVRFKEVILT 90 (298)
Q Consensus 19 ~~~~~~y~~~~~lg~g~~~~vy~~~~~-----~~~~~~aiK~~~~~~~--~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~ 90 (298)
....++|++.+.||.|+||.||+|.+. .+++.||+|++..... ....+.+|+.++.++ +||||+++++++..
T Consensus 3 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 82 (343)
T cd05103 3 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK 82 (343)
T ss_pred ccchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeec
Confidence 345579999999999999999999853 4578899999875432 234577899999999 68999999998765
Q ss_pred C-CeEEEEEeccCCCCHHHHHHhC--------------------------------------------------------
Q 022401 91 P-THLAIVMEYASGGELFERICNA-------------------------------------------------------- 113 (298)
Q Consensus 91 ~-~~~~lv~~~~~~~sL~~~l~~~-------------------------------------------------------- 113 (298)
. ..+++++||+++++|.+++...
T Consensus 83 ~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (343)
T cd05103 83 PGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVE 162 (343)
T ss_pred CCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccch
Confidence 4 5689999999999999888542
Q ss_pred -----------CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC---CCCC
Q 022401 114 -----------GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS---QPKS 179 (298)
Q Consensus 114 -----------~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~---~~~~ 179 (298)
..++...+..++.|++.||+|||++|++|+||||+||+++.++. ++|+|||++....... ....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~--~kl~dfg~~~~~~~~~~~~~~~~ 240 (343)
T cd05103 163 EEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNV--VKICDFGLARDIYKDPDYVRKGD 240 (343)
T ss_pred hhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCc--EEEEecccccccccCcchhhcCC
Confidence 12567788889999999999999999999999999999998876 9999999886432221 1122
Q ss_pred CCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHH
Q 022401 180 TVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLI 258 (298)
Q Consensus 180 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (298)
..++..|+|||.+.+..++.+ +||||||+++|++++ |..||........+.... .. ....+.+...++++.+++
T Consensus 241 ~~~~~~y~aPE~~~~~~~~~~-~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~ 315 (343)
T cd05103 241 ARLPLKWMAPETIFDRVYTIQ-SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL---KE-GTRMRAPDYTTPEMYQTM 315 (343)
T ss_pred CCCCcceECcHHhcCCCCCch-hhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHH---hc-cCCCCCCCCCCHHHHHHH
Confidence 234567999999877777665 999999999999997 889987654333222222 11 122223334678999999
Q ss_pred HHhhhhCCCCcccccccchhh
Q 022401 259 SRIFVADPAAVSIFFFPLNMS 279 (298)
Q Consensus 259 ~~~l~~dp~~Rps~~~~l~~~ 279 (298)
.+||+.||.+|||+.+++++.
T Consensus 316 ~~cl~~~p~~Rps~~eil~~l 336 (343)
T cd05103 316 LDCWHGEPSQRPTFSELVEHL 336 (343)
T ss_pred HHHccCChhhCcCHHHHHHHH
Confidence 999999999999999998753
No 329
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=7.4e-39 Score=274.11 Aligned_cols=253 Identities=27% Similarity=0.444 Sum_probs=203.6
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC-cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEeccC
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD-KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYAS 102 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~ 102 (298)
.|+....||+|++|.||.+....++..+++|.+.... .....+.+|+.+++.++|+|++++++++...+..++++||++
T Consensus 21 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 100 (292)
T cd06657 21 YLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE 100 (292)
T ss_pred HhhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCC
Confidence 3445578999999999999999899999999876433 234567889999999999999999999999999999999999
Q ss_pred CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC-CCCCCC
Q 022401 103 GGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-QPKSTV 181 (298)
Q Consensus 103 ~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~ 181 (298)
+++|.+.+. ...+++..+..++.|++.+++|||+.|++|+||+|+||+++.++. ++|+|||++....... ......
T Consensus 101 ~~~L~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~--~~l~dfg~~~~~~~~~~~~~~~~ 177 (292)
T cd06657 101 GGALTDIVT-HTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGR--VKLSDFGFCAQVSKEVPRRKSLV 177 (292)
T ss_pred CCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCC--EEEcccccceecccccccccccc
Confidence 999988774 446899999999999999999999999999999999999998877 9999999876443222 223345
Q ss_pred CCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHh
Q 022401 182 GTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRI 261 (298)
Q Consensus 182 ~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 261 (298)
++..|++||.+.+..++.+ +|+||+|+++|++++|..||.......... .... ...........++.++.+++.+|
T Consensus 178 ~~~~y~~pE~~~~~~~~~~-~Dv~slGvil~el~tg~~p~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~l~~li~~~ 253 (292)
T cd06657 178 GTPYWMAPELISRLPYGPE-VDIWSLGIMVIEMVDGEPPYFNEPPLKAMK-MIRD--NLPPKLKNLHKVSPSLKGFLDRL 253 (292)
T ss_pred cCccccCHHHhcCCCCCch-hhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHh--hCCcccCCcccCCHHHHHHHHHH
Confidence 6788999999877666555 999999999999999999998654432221 1111 11222223345789999999999
Q ss_pred hhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 262 FVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 262 l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
|+.||.+||++ .++++|||+..
T Consensus 254 l~~~P~~R~~~--------~~ll~~~~~~~ 275 (292)
T cd06657 254 LVRDPAQRATA--------AELLKHPFLAK 275 (292)
T ss_pred HhCCcccCcCH--------HHHhcChHHhc
Confidence 99999999987 45567888764
No 330
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=7.8e-39 Score=270.68 Aligned_cols=248 Identities=31% Similarity=0.470 Sum_probs=199.7
Q ss_pred CeeEEeeeccCCeEEEEEEEEcc-CCcEEEEEEeecCC-----------cchHHHHHHHHHHhc-CCCCCeeeeeEEEEe
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKV-TKELVAVKYIERGD-----------KIDENVQREIINHRS-LRHPNIVRFKEVILT 90 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~-~~~~~aiK~~~~~~-----------~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~ 90 (298)
.|++.+.||+|++|.||.+.+.. +++.+++|.+.... .....+.+|+.++.+ ++|||++++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 48899999999999999999987 67889999875321 112345667777764 799999999999999
Q ss_pred CCeEEEEEeccCCCCHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHhh-cCcEEecCCCCceEeeCCCCCCEEEeec
Q 022401 91 PTHLAIVMEYASGGELFERIC----NAGRFSEDEARFFFQQLISGVSYCHA-MQVCHRDLKLENTLLDGSPAPRLKICDF 165 (298)
Q Consensus 91 ~~~~~lv~~~~~~~sL~~~l~----~~~~~~~~~~~~i~~~l~~~l~~Lh~-~~i~H~dl~p~nilv~~~~~~~~~l~d~ 165 (298)
++..++++||+.+++|.+.+. ....+++..++.++.+++.++.+||+ .+++|+||+|+||+++.++. ++|+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~--~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDK--VTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCc--EEEecc
Confidence 999999999999999988874 34468999999999999999999996 78999999999999998887 999999
Q ss_pred CccccccCCCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCC
Q 022401 166 GYSKSSVLHSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVP 245 (298)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 245 (298)
|.+.............++..|++||.+.+..++.+ +|+||||+++|++++|..||...+... ....+........
T Consensus 159 g~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~-~Dv~slG~ll~~l~~g~~p~~~~~~~~----~~~~~~~~~~~~~ 233 (269)
T cd08528 159 GLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEK-ADVWAFGCILYQMCTLQPPFYSTNMLS----LATKIVEAVYEPL 233 (269)
T ss_pred cceeecccccccccccCcccCcChhhhcCCCCchH-HHHHHHHHHHHHHHhCCCcccccCHHH----HHHHHhhccCCcC
Confidence 99875444333344557888999999987776555 999999999999999999997654322 2223333333222
Q ss_pred CCCCCCHHHHHHHHHhhhhCCCCcccccccchh
Q 022401 246 DTNPISQECRDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 246 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
.....++++.+++.+||+.||++||++.++..+
T Consensus 234 ~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 234 PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 223478999999999999999999999887754
No 331
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=8.1e-39 Score=273.32 Aligned_cols=249 Identities=24% Similarity=0.371 Sum_probs=200.4
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEcc-----CCcEEEEEEeecCCc--chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCe
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKV-----TKELVAVKYIERGDK--IDENVQREIINHRSLRHPNIVRFKEVILTPTH 93 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~-----~~~~~aiK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 93 (298)
..++|++.+.||+|+||.||++.+.. ++..+++|.+..... ....+.+|+.++++++|||++++++++.+...
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~ 82 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKP 82 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCc
Confidence 45789999999999999999998753 577899998875432 23568889999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHHhC----------------------CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceE
Q 022401 94 LAIVMEYASGGELFERICNA----------------------GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTL 151 (298)
Q Consensus 94 ~~lv~~~~~~~sL~~~l~~~----------------------~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nil 151 (298)
.++++|++++++|.+++... ..++...++.++.+++.||.+||++|++|+||+|+||+
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil 162 (288)
T cd05050 83 MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCL 162 (288)
T ss_pred cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheE
Confidence 99999999999999998643 23678889999999999999999999999999999999
Q ss_pred eeCCCCCCEEEeecCccccccCCC---CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCc
Q 022401 152 LDGSPAPRLKICDFGYSKSSVLHS---QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEP 227 (298)
Q Consensus 152 v~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~ 227 (298)
++.++. ++|+|||++....... .......+..|+|||.+.+..++.+ +||||||+++|+|++ |..||......
T Consensus 163 ~~~~~~--~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Dv~slG~il~el~~~~~~p~~~~~~~ 239 (288)
T cd05050 163 VGENMV--VKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTE-SDVWAYGVVLWEIFSYGMQPYYGMAHE 239 (288)
T ss_pred ecCCCc--eEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCch-hHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 988887 9999999876332221 1122234567999999877777665 999999999999997 77888765432
Q ss_pred hhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccch
Q 022401 228 KDFRKTIQRILSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~ 277 (298)
+....+..... .+.+...+.++.+++.+||+.||.+|||+.+++.
T Consensus 240 ----~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 240 ----EVIYYVRDGNV-LSCPDNCPLELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred ----HHHHHHhcCCC-CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 23333333322 2233457899999999999999999999988774
No 332
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.5e-38 Score=266.22 Aligned_cols=241 Identities=27% Similarity=0.358 Sum_probs=196.1
Q ss_pred eeeccCCeEEEEEEEEccCCcEEEEEEeecCCc--chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEeccCCCCH
Q 022401 29 RDIGSGNFGVARLMRDKVTKELVAVKYIERGDK--IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 106 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~~~sL 106 (298)
+.||+|++|.||.+.+.. ++.+++|.+..... ....+.+|++++++++|+||+++++++.+....++|+|++.+++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l 79 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSL 79 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcH
Confidence 468999999999999977 88999998875432 345788999999999999999999999999999999999999999
Q ss_pred HHHHHh-CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCC---CCCCC
Q 022401 107 FERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP---KSTVG 182 (298)
Q Consensus 107 ~~~l~~-~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~---~~~~~ 182 (298)
.+++.. ...++...+..++.+++.++.+||+++++|+||+|+||+++.++. ++|+|||++......... .....
T Consensus 80 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~--~~l~d~g~~~~~~~~~~~~~~~~~~~ 157 (251)
T cd05041 80 LTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNV--LKISDFGMSREEEGGIYTVSDGLKQI 157 (251)
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCc--EEEeeccccccccCCcceeccccCcc
Confidence 999865 346889999999999999999999999999999999999998887 999999988644321111 12223
Q ss_pred CCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHh
Q 022401 183 TPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRI 261 (298)
Q Consensus 183 ~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 261 (298)
...|+|||.+.+..++.+ +|+||||+++|++++ |..||........ ...+ ......+.+...+.++.+++.+|
T Consensus 158 ~~~y~~PE~~~~~~~~~~-~Di~slG~i~~~l~t~~~~p~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~li~~~ 231 (251)
T cd05041 158 PIKWTAPEALNYGRYTSE-SDVWSYGILLWETFSLGDTPYPGMSNQQT----RERI-ESGYRMPAPQLCPEEIYRLMLQC 231 (251)
T ss_pred eeccCChHhhccCCCCcc-hhHHHHHHHHHHHHhccCCCCccCCHHHH----HHHH-hcCCCCCCCccCCHHHHHHHHHH
Confidence 456999999877766555 999999999999998 7888876553221 1112 22233344455789999999999
Q ss_pred hhhCCCCcccccccchh
Q 022401 262 FVADPAAVSIFFFPLNM 278 (298)
Q Consensus 262 l~~dp~~Rps~~~~l~~ 278 (298)
|+.+|.+|||+.++++.
T Consensus 232 l~~~p~~Rp~~~ell~~ 248 (251)
T cd05041 232 WAYDPENRPSFSEIYNE 248 (251)
T ss_pred hccChhhCcCHHHHHHH
Confidence 99999999999888853
No 333
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.2e-40 Score=286.28 Aligned_cols=250 Identities=38% Similarity=0.650 Sum_probs=227.0
Q ss_pred CCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcch---HHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEE
Q 022401 20 HDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKID---ENVQREIINHRSLRHPNIVRFKEVILTPTHLAI 96 (298)
Q Consensus 20 ~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 96 (298)
...+.|.+.+.||.|.|+.|..+++..++..||+|.+.+..... ..+.+|++++..+.||||++++.+.+....+|+
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lyl 132 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYL 132 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEE
Confidence 34578999999999999999999999999999999988754333 346789999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCC
Q 022401 97 VMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ 176 (298)
Q Consensus 97 v~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~ 176 (298)
|+||+.++.+.+++.+.+...+.+...++.|+..|++|||+.+++|||||.+|++++.+-+ +||+|||++........
T Consensus 133 V~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mn--ikIaDfgfS~~~~~~~~ 210 (596)
T KOG0586|consen 133 VMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMN--IKIADFGFSTFFDYGLM 210 (596)
T ss_pred EEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccc--eeeeccccceeeccccc
Confidence 9999999999999999999999999999999999999999999999999999999998887 99999999988888888
Q ss_pred CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHH
Q 022401 177 PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRD 256 (298)
Q Consensus 177 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 256 (298)
....+|++-|.|||.+.+..+....+|+||+|+++|.++.|.+||.+..- ..+-.+...+.++++.. ++.+..+
T Consensus 211 lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~l----k~Lr~rvl~gk~rIp~~--ms~dce~ 284 (596)
T KOG0586|consen 211 LQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNL----KELRPRVLRGKYRIPFY--MSCDCED 284 (596)
T ss_pred ccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccc----ccccchheeeeecccce--eechhHH
Confidence 88999999999999999999999999999999999999999999998543 45555666777777776 7899999
Q ss_pred HHHHhhhhCCCCcccccccch
Q 022401 257 LISRIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 257 li~~~l~~dp~~Rps~~~~l~ 277 (298)
+|+++|-.+|.+|++..++..
T Consensus 285 lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 285 LLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred HHHHhhccCccccCCHHHhhh
Confidence 999999999999998766554
No 334
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.9e-40 Score=289.06 Aligned_cols=256 Identities=23% Similarity=0.390 Sum_probs=211.0
Q ss_pred CCCCe-eEEeeeccCCeEEEEEEEEccCCcEEEEEEee-----cCCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCC--
Q 022401 21 DSDRY-DFVRDIGSGNFGVARLMRDKVTKELVAVKYIE-----RGDKIDENVQREIINHRSLRHPNIVRFKEVILTPT-- 92 (298)
Q Consensus 21 ~~~~y-~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~-----~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-- 92 (298)
..++| ++.++||.|+|.+||+|.+..+|-.||=-.+. ......+++..|+.+|+.|+||||++++.++.+..
T Consensus 37 p~gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~ 116 (632)
T KOG0584|consen 37 PTGRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNK 116 (632)
T ss_pred CCCceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCc
Confidence 33455 56789999999999999999888777644332 34455588999999999999999999999998764
Q ss_pred eEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcC--cEEecCCCCceEeeCCCCCCEEEeecCcccc
Q 022401 93 HLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICDFGYSKS 170 (298)
Q Consensus 93 ~~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~--i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~ 170 (298)
.+.+|+|.+..|+|+.++.+...++...++.|++||++||.|||++. |+|||||.+||||+.+.. .|||+|+|+|..
T Consensus 117 ~in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G-~VKIGDLGLAtl 195 (632)
T KOG0584|consen 117 TINFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLG-EVKIGDLGLATL 195 (632)
T ss_pred eeeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcC-ceeecchhHHHH
Confidence 58999999999999999999999999999999999999999999876 999999999999986543 599999999975
Q ss_pred ccCCCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCC
Q 022401 171 SVLHSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPI 250 (298)
Q Consensus 171 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (298)
...... ....|||.|||||+.. -.|+.. .||||||++++||+|+..||....... ...+++.++-..-....--
T Consensus 196 ~r~s~a-ksvIGTPEFMAPEmYE-E~YnE~-VDVYaFGMCmLEMvT~eYPYsEC~n~A---QIYKKV~SGiKP~sl~kV~ 269 (632)
T KOG0584|consen 196 LRKSHA-KSVIGTPEFMAPEMYE-ENYNEL-VDVYAFGMCMLEMVTSEYPYSECTNPA---QIYKKVTSGIKPAALSKVK 269 (632)
T ss_pred hhcccc-ceeccCccccChHHHh-hhcchh-hhhhhhhHHHHHHHhccCChhhhCCHH---HHHHHHHcCCCHHHhhccC
Confidence 543333 3478999999999875 556555 999999999999999999999987654 4555666655433333334
Q ss_pred CHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 251 SQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 251 ~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
.+++++||.+||.. ..+|+|+ .++|.||||+..
T Consensus 270 dPevr~fIekCl~~-~~~R~sa--------~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 270 DPEVREFIEKCLAT-KSERLSA--------KELLKDPFFDED 302 (632)
T ss_pred CHHHHHHHHHHhcC-chhccCH--------HHHhhChhhccc
Confidence 78999999999988 9999977 666688888864
No 335
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=2e-38 Score=276.33 Aligned_cols=256 Identities=25% Similarity=0.370 Sum_probs=198.4
Q ss_pred CeeEEeeeccCCeEEEEEEEEccC--CcEEEEEEeecCC---cchHHHHHHHHHHhcC-CCCCeeeeeEEEEeC----Ce
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVT--KELVAVKYIERGD---KIDENVQREIINHRSL-RHPNIVRFKEVILTP----TH 93 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~--~~~~aiK~~~~~~---~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~----~~ 93 (298)
+|++.+.||+|+||.||.+++..+ +..+|+|.+.... .....+.+|+.+++++ +||||+++++.+... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 589999999999999999999877 8899999876432 2245677899999999 599999999875432 45
Q ss_pred EEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccC
Q 022401 94 LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 173 (298)
Q Consensus 94 ~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~ 173 (298)
++++++++. ++|.+.+.....+++..++.++.|++.||+|||+.|++|+||+|+||+++.++. ++|+|||++.....
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~--~kl~Dfg~a~~~~~ 157 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCE--LKICDFGLARGFSE 157 (332)
T ss_pred EEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCC--EEeCcCCCceeccc
Confidence 788899885 589998888888999999999999999999999999999999999999998887 99999998864332
Q ss_pred CCC-----CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhc--------
Q 022401 174 HSQ-----PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSV-------- 240 (298)
Q Consensus 174 ~~~-----~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-------- 240 (298)
... .....++..|+|||.+.+......++|+||+|++++++++|..||...+....+..........
T Consensus 158 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (332)
T cd07857 158 NPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRI 237 (332)
T ss_pred ccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence 211 1223577889999987664433455999999999999999999998765433332222211000
Q ss_pred ---------------C-CCCC-CCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhh
Q 022401 241 ---------------Q-YSVP-DTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMF 290 (298)
Q Consensus 241 ---------------~-~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~ 290 (298)
. .... .....+.++.+++.+||+.||.+|||+ .+++.|||+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~--------~~ll~~~~~~ 296 (332)
T cd07857 238 GSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISV--------EEALEHPYLA 296 (332)
T ss_pred hhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCH--------HHHhcChhhh
Confidence 0 0000 112357899999999999999999987 4556788875
No 336
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-40 Score=269.43 Aligned_cols=261 Identities=34% Similarity=0.544 Sum_probs=221.3
Q ss_pred CCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchH----HHHHHHHHHhcCCCCCeeeeeEEEEeCCeEE
Q 022401 20 HDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDE----NVQREIINHRSLRHPNIVRFKEVILTPTHLA 95 (298)
Q Consensus 20 ~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~----~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 95 (298)
...++|.++++||+|.||.|.+++.+.+++.||+|++.++.-... .-..|-.+|+..+||.+..+...|.....+|
T Consensus 165 vTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlC 244 (516)
T KOG0690|consen 165 VTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLC 244 (516)
T ss_pred eccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEE
Confidence 356899999999999999999999999999999999887643322 2235778888899999999999999999999
Q ss_pred EEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC-
Q 022401 96 IVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH- 174 (298)
Q Consensus 96 lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~- 174 (298)
+||||.+||.|.-.++....+++.....+-..|+.||.|||+++||+||||.+|+++|.+|+ +|+.|||+|......
T Consensus 245 FVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGH--IKitDFGLCKE~I~~g 322 (516)
T KOG0690|consen 245 FVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGH--IKITDFGLCKEEIKYG 322 (516)
T ss_pred EEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCc--eEeeecccchhccccc
Confidence 99999999999999988888999999999999999999999999999999999999999999 999999999755444
Q ss_pred CCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHH
Q 022401 175 SQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQEC 254 (298)
Q Consensus 175 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (298)
......+|+|.|+|||++..+-|... .|.|.+|+++|||++|++||...+....+ .-+.-.....| +.++++.
T Consensus 323 ~t~kTFCGTPEYLAPEVleDnDYgra-VDWWG~GVVMYEMmCGRLPFyn~dh~kLF----eLIl~ed~kFP--r~ls~eA 395 (516)
T KOG0690|consen 323 DTTKTFCGTPEYLAPEVLEDNDYGRA-VDWWGVGVVMYEMMCGRLPFYNKDHEKLF----ELILMEDLKFP--RTLSPEA 395 (516)
T ss_pred ceeccccCChhhcCchhhccccccce-eehhhhhHHHHHHHhccCcccccchhHHH----HHHHhhhccCC--ccCCHHH
Confidence 44577889999999999988888655 99999999999999999999987764433 33344444444 4489999
Q ss_pred HHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 255 RDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 255 ~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
..|+..+|.+||.+|..- --....++..|+|+.+.
T Consensus 396 ktLLsGLL~kdP~kRLGg---GpdDakEi~~h~FF~~v 430 (516)
T KOG0690|consen 396 KTLLSGLLKKDPKKRLGG---GPDDAKEIMRHRFFASV 430 (516)
T ss_pred HHHHHHHhhcChHhhcCC---CchhHHHHHhhhhhccC
Confidence 999999999999999854 11234667788888654
No 337
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=2.6e-38 Score=264.59 Aligned_cols=240 Identities=24% Similarity=0.328 Sum_probs=193.6
Q ss_pred eeeccCCeEEEEEEEEccCCcEEEEEEeecCC--cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEeccCCCCH
Q 022401 29 RDIGSGNFGVARLMRDKVTKELVAVKYIERGD--KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 106 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~~~sL 106 (298)
+.||+|++|.||++... +++.+++|.+.... .....+.+|+.++++++|||++++++++......++|+||+++++|
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 79 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDF 79 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcH
Confidence 46899999999999865 67789999876543 2234678899999999999999999999999999999999999999
Q ss_pred HHHHHhC-CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCC--CCCCCC
Q 022401 107 FERICNA-GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP--KSTVGT 183 (298)
Q Consensus 107 ~~~l~~~-~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~ 183 (298)
.+++... ..+++..+..++.+++.+|.|||++|++|+||+|+||+++.++. ++|+|||++......... ......
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~--~~l~d~g~~~~~~~~~~~~~~~~~~~ 157 (250)
T cd05085 80 LSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNV--LKISDFGMSRQEDDGIYSSSGLKQIP 157 (250)
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCe--EEECCCccceeccccccccCCCCCCc
Confidence 9988653 45789999999999999999999999999999999999998877 999999987643322111 122335
Q ss_pred CcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhh
Q 022401 184 PAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIF 262 (298)
Q Consensus 184 ~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 262 (298)
..|+|||.+.+..++.+ +||||||+++|++++ |..||....... ....+. ..........++.++.+++.+||
T Consensus 158 ~~y~aPE~~~~~~~~~~-~Di~slG~ll~~~~~~g~~p~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~li~~~l 231 (250)
T cd05085 158 IKWTAPEALNYGRYSSE-SDVWSYGILLWETFSLGVCPYPGMTNQQ----AREQVE-KGYRMSCPQKCPDDVYKVMQRCW 231 (250)
T ss_pred ccccCHHHhccCCCCch-hHHHHHHHHHHHHhcCCCCCCCCCCHHH----HHHHHH-cCCCCCCCCCCCHHHHHHHHHHc
Confidence 67999999877766555 999999999999998 899997654322 222222 22233334457899999999999
Q ss_pred hhCCCCcccccccch
Q 022401 263 VADPAAVSIFFFPLN 277 (298)
Q Consensus 263 ~~dp~~Rps~~~~l~ 277 (298)
+.+|++||++.+++.
T Consensus 232 ~~~p~~Rp~~~~l~~ 246 (250)
T cd05085 232 DYKPENRPKFSELQK 246 (250)
T ss_pred ccCcccCCCHHHHHH
Confidence 999999999988775
No 338
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=8.2e-39 Score=279.82 Aligned_cols=255 Identities=25% Similarity=0.387 Sum_probs=197.2
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC---CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeC------Ce
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG---DKIDENVQREIINHRSLRHPNIVRFKEVILTP------TH 93 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~~ 93 (298)
++|.+.+.||+|++|.||+|.+..+++.+|+|.+... ......+.+|+.+++.++||||+++.+++... ..
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 94 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD 94 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence 6899999999999999999999888999999988653 22234577899999999999999999998754 34
Q ss_pred EEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccC
Q 022401 94 LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 173 (298)
Q Consensus 94 ~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~ 173 (298)
+++|++++.. +|.... ...+++..+..++.|++.|++|||+.|++|+||+|+||+++.++. ++|+|||++.....
T Consensus 95 ~~lv~e~~~~-~l~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~--~kL~dfg~~~~~~~ 169 (342)
T cd07879 95 FYLVMPYMQT-DLQKIM--GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCE--LKILDFGLARHADA 169 (342)
T ss_pred EEEEeccccc-CHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCC--EEEeeCCCCcCCCC
Confidence 6999999854 666554 346889999999999999999999999999999999999998877 99999998864322
Q ss_pred CCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHH----------------
Q 022401 174 HSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRI---------------- 237 (298)
Q Consensus 174 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~---------------- 237 (298)
......++..|+|||.+.+......++|+||||+++|+|++|..||...+....+.......
T Consensus 170 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (342)
T cd07879 170 --EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAA 247 (342)
T ss_pred --CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccch
Confidence 22233457789999998765444555999999999999999999998765433332222110
Q ss_pred ---hhcCCCCC------CCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 238 ---LSVQYSVP------DTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 238 ---~~~~~~~~------~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
.......+ .....+.++.++|.+||+.||.+||++ .+++.|||+.+-
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~--------~e~l~h~~f~~~ 303 (342)
T cd07879 248 KSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTA--------TEALEHPYFDSF 303 (342)
T ss_pred HHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCH--------HHHhcCcchhhc
Confidence 00000000 012357889999999999999999987 555678888654
No 339
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=3e-39 Score=282.70 Aligned_cols=256 Identities=23% Similarity=0.376 Sum_probs=199.9
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC---CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCe-----
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG---DKIDENVQREIINHRSLRHPNIVRFKEVILTPTH----- 93 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----- 93 (298)
.++|++.+.||+|++|.||.+++..++..|++|++... ......+.+|+.++++++|||++++.+++...+.
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQ 93 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccc
Confidence 46899999999999999999999989999999987653 2233456789999999999999999998766544
Q ss_pred -EEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCcccccc
Q 022401 94 -LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 172 (298)
Q Consensus 94 -~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~ 172 (298)
.++|++++ +++|.+++.. ..+++..++.++.+++.|+++||+.|++|+||+|+||+++.++. ++|+|||++....
T Consensus 94 ~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~--~kL~dfg~~~~~~ 169 (343)
T cd07851 94 DVYLVTHLM-GADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCE--LKILDFGLARHTD 169 (343)
T ss_pred cEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCC--EEEcccccccccc
Confidence 89999998 5689888854 56899999999999999999999999999999999999998877 9999999987443
Q ss_pred CCCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcC-----------
Q 022401 173 LHSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQ----------- 241 (298)
Q Consensus 173 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~----------- 241 (298)
.. .....++..|+|||.+.+......++||||||+++|++++|..||...+....+...........
T Consensus 170 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 247 (343)
T cd07851 170 DE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSES 247 (343)
T ss_pred cc--ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchh
Confidence 22 23345677899999886644444559999999999999999999987654333222211100000
Q ss_pred --------CCC------CCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 242 --------YSV------PDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 242 --------~~~------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
... ......++++.++|++||+.||.+|||+. ++++|||+..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~--------ell~h~~~~~ 303 (343)
T cd07851 248 ARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAA--------EALAHPYLAE 303 (343)
T ss_pred HHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHH--------HHhcCCCccc
Confidence 000 00113588999999999999999999884 4557777753
No 340
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=2.6e-38 Score=275.01 Aligned_cols=255 Identities=27% Similarity=0.446 Sum_probs=197.8
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC---CcchHHHHHHHHHHhcCCCCCeeeeeEEEEe-CCeEEE
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG---DKIDENVQREIINHRSLRHPNIVRFKEVILT-PTHLAI 96 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~l 96 (298)
..++|++.+.||.|++|.||++.+..+++.+++|++... ......+.+|+.++++++|||++++.+++.. ....++
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~l 87 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYF 87 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEE
Confidence 567899999999999999999999999999999987543 2234667789999999999999999999876 457899
Q ss_pred EEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCC
Q 022401 97 VMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ 176 (298)
Q Consensus 97 v~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~ 176 (298)
+++++ +++|...+.. ..+++..+..++.|++.||+|||+.|++|+||+|.||+++.++. ++|+|||.+..... .
T Consensus 88 v~e~~-~~~L~~~~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~--~~l~dfg~~~~~~~--~ 161 (328)
T cd07856 88 VTELL-GTDLHRLLTS-RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCD--LKICDFGLARIQDP--Q 161 (328)
T ss_pred Eeehh-ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCC--EEeCccccccccCC--C
Confidence 99998 5588877754 45788889999999999999999999999999999999998777 99999998764322 1
Q ss_pred CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHH-------------------
Q 022401 177 PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRI------------------- 237 (298)
Q Consensus 177 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~------------------- 237 (298)
.....++..|+|||.+.+......++|+||+|+++|++++|..||........+.......
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (328)
T cd07856 162 MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRF 241 (328)
T ss_pred cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHH
Confidence 2233467789999987664434455999999999999999999997654322211111100
Q ss_pred -hhcC--CCCC---CCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 238 -LSVQ--YSVP---DTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 238 -~~~~--~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
.... ...+ ....+++++.++|.+||+.+|++|||+.++ +.|||+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~el--------l~~~~~ 291 (328)
T cd07856 242 VQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEA--------LAHPYL 291 (328)
T ss_pred HhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHH--------hcCCcc
Confidence 0000 0001 112467899999999999999999988554 566666
No 341
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=9.5e-39 Score=279.42 Aligned_cols=256 Identities=29% Similarity=0.381 Sum_probs=195.0
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC-cchHHHHHHHHHHhcCCCCCeeeeeEEEEeC---------
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD-KIDENVQREIINHRSLRHPNIVRFKEVILTP--------- 91 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--------- 91 (298)
.++|++.+.||.|++|.||++.+..+++.|++|.+.... .....+.+|+.++++++|||++++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 378999999999999999999999999999999886543 3345678899999999999999999876543
Q ss_pred -----CeEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecC
Q 022401 92 -----THLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFG 166 (298)
Q Consensus 92 -----~~~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~ 166 (298)
...++++||++ ++|.+.+.. ..+++..++.++.|++.|++|||+.|++|+||+|+||+++.++. .++|+|||
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~-~~kl~dfg 160 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQ-GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDL-VLKIGDFG 160 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCc-eEEECCcc
Confidence 35789999996 488887754 46899999999999999999999999999999999999975442 38999999
Q ss_pred ccccccCCCC----CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHH-----
Q 022401 167 YSKSSVLHSQ----PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRI----- 237 (298)
Q Consensus 167 ~~~~~~~~~~----~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~----- 237 (298)
++........ .....++..|+|||.+........++|||||||++|+|++|..||...+............
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 240 (342)
T cd07854 161 LARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVRE 240 (342)
T ss_pred cceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCh
Confidence 8864322211 1223467789999987654444555999999999999999999997765433322222110
Q ss_pred -------------hh---cCCCCC---CCCCCCHHHHHHHHHhhhhCCCCcccccccchhhh
Q 022401 238 -------------LS---VQYSVP---DTNPISQECRDLISRIFVADPAAVSIFFFPLNMSC 280 (298)
Q Consensus 238 -------------~~---~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~ 280 (298)
.. .....+ ....++.++.+|+.+||+.||.+|||+.+++.+.|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~ 302 (342)
T cd07854 241 EDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPY 302 (342)
T ss_pred HHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCc
Confidence 00 000000 01236789999999999999999998855554333
No 342
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=2.4e-38 Score=267.81 Aligned_cols=243 Identities=23% Similarity=0.298 Sum_probs=187.1
Q ss_pred eeeccCCeEEEEEEEEc--cCCcEEEEEEeecCCc--chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEeccCCC
Q 022401 29 RDIGSGNFGVARLMRDK--VTKELVAVKYIERGDK--IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGG 104 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~--~~~~~~aiK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~~~ 104 (298)
+.||+|+||.||++... .++..+++|.+..... ....+.+|+.++++++|||++++++++.+....++|+||++++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 46899999999999864 3456789998765432 2346788999999999999999999999888999999999999
Q ss_pred CHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC---C
Q 022401 105 ELFERICNAG-----RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS---Q 176 (298)
Q Consensus 105 sL~~~l~~~~-----~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~---~ 176 (298)
+|.+++.... ..+...+..++.|++.|+.|||+.|++|+||+|+||+++.++. ++|+|||++....... .
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~--~kL~dfg~~~~~~~~~~~~~ 158 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLT--VKIGDYGLSHNKYKEDYYVT 158 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCc--EEECCccccccccCcceeec
Confidence 9999986432 3566778899999999999999999999999999999998776 9999999875332221 1
Q ss_pred CCCCCCCCcccCcccccccc------CCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCC---
Q 022401 177 PKSTVGTPAYIAPEVLLRHE------YDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPD--- 246 (298)
Q Consensus 177 ~~~~~~~~~~~aPE~~~~~~------~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~--- 246 (298)
.....++..|+|||.+.... ..+.++|+||+|+++|+|++ |..||......+...... .......+.
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~ 235 (269)
T cd05087 159 PDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTV---REQQLKLPKPRL 235 (269)
T ss_pred CCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHh---hcccCCCCCCcc
Confidence 12234567899999876432 12345999999999999996 999997765433322221 122222221
Q ss_pred CCCCCHHHHHHHHHhhhhCCCCcccccccch
Q 022401 247 TNPISQECRDLISRIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 247 ~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~ 277 (298)
....++.+.+++..|+ .+|++|||+.+++.
T Consensus 236 ~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 236 KLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred CCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 2246788999999999 68999999998885
No 343
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=1.1e-38 Score=275.83 Aligned_cols=254 Identities=23% Similarity=0.363 Sum_probs=191.0
Q ss_pred eEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC---CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEeccC
Q 022401 26 DFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG---DKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYAS 102 (298)
Q Consensus 26 ~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~ 102 (298)
.+++.+|.| +.||.++...+++.+|+|++... ......+.+|+.++++++|+||+++++++...+..++++||+.
T Consensus 5 ~i~~~~~~~--~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~ 82 (314)
T cd08216 5 LIGKCFEDL--MIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMA 82 (314)
T ss_pred hhhHhhcCC--ceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccC
Confidence 344444444 55666666668999999998754 3334578899999999999999999999999999999999999
Q ss_pred CCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCC----
Q 022401 103 GGELFERICNA--GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ---- 176 (298)
Q Consensus 103 ~~sL~~~l~~~--~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~---- 176 (298)
+++|.+++... ..+++..+..++.|++.||+|||+.+++|+||+|+||+++.++. +++.||+.+........
T Consensus 83 ~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~--~kl~d~~~~~~~~~~~~~~~~ 160 (314)
T cd08216 83 YGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGK--VVLSGLRYSVSMIKHGKRQRV 160 (314)
T ss_pred CCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCc--eEEecCccceeeccccccccc
Confidence 99999998753 45889999999999999999999999999999999999998887 99999998753322111
Q ss_pred ----CCCCCCCCcccCccccccc--cCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhh-----------
Q 022401 177 ----PKSTVGTPAYIAPEVLLRH--EYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILS----------- 239 (298)
Q Consensus 177 ----~~~~~~~~~~~aPE~~~~~--~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~----------- 239 (298)
.....++..|+|||.+... .++. ++|+||+|+++++|++|..||..........+.......
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~-~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (314)
T cd08216 161 VHDFPKSSVKNLPWLSPEVLQQNLQGYNE-KSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLY 239 (314)
T ss_pred cccccccccccccccCHHHhcCCCCCCCc-chhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhh
Confidence 1223356679999998654 3444 499999999999999999999875543322221111000
Q ss_pred -----------------cCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 240 -----------------VQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 240 -----------------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
..........++.++.+|+.+||+.||++|||+ .+++.|||+...
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~--------~~ll~~p~~~~~ 301 (314)
T cd08216 240 EDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSA--------SQLLNHSFFKQC 301 (314)
T ss_pred cCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCH--------HHHhcCchHhhh
Confidence 000001111234678999999999999999988 455577887644
No 344
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=1.2e-38 Score=268.20 Aligned_cols=249 Identities=28% Similarity=0.454 Sum_probs=197.3
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeec------CCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEE
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIER------GDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIV 97 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 97 (298)
+|.+.+.||+|++|.||++.+...+..+++|.... .......+..|..+++.++|||++++++++.+....+++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 68999999999999999999987666666666543 112223456788999999999999999999999999999
Q ss_pred EeccCCCCHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccC
Q 022401 98 MEYASGGELFERICN----AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 173 (298)
Q Consensus 98 ~~~~~~~sL~~~l~~----~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~ 173 (298)
+||+++++|.+.+.. ...+++..++.++.|++.|+.+||+.|++|+||+|+||++++ +. ++|+|||.+.....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~--~~l~d~g~~~~~~~ 157 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NL--LKIGDFGVSRLLMG 157 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CC--EeecccCceeecCC
Confidence 999999999888753 456899999999999999999999999999999999999975 33 89999998764322
Q ss_pred C-CCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCH
Q 022401 174 H-SQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQ 252 (298)
Q Consensus 174 ~-~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (298)
. .......++..|+|||.+.+..++.+ +|+||+|++++++++|..||..... ......+...... ..+..++.
T Consensus 158 ~~~~~~~~~~~~~~~~pe~~~~~~~~~~-~Dv~slG~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~ 231 (260)
T cd08222 158 SCDLATTFTGTPYYMSPEALKHQGYDSK-SDIWSLGCILYEMCCLAHAFEGQNF----LSVVLRIVEGPTP-SLPETYSR 231 (260)
T ss_pred CcccccCCCCCcCccCHHHHccCCCCch-hhHHHHHHHHHHHHhCCCCCCCccH----HHHHHHHHcCCCC-CCcchhcH
Confidence 2 22233456788999999877776665 9999999999999999999965432 2223333332221 22334789
Q ss_pred HHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhh
Q 022401 253 ECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 253 ~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~ 289 (298)
++.++|.+||..||++||++ .++++|||+
T Consensus 232 ~~~~li~~~l~~~p~~Rp~~--------~~il~~~~~ 260 (260)
T cd08222 232 QLNSIMQSMLNKDPSLRPSA--------AEILRNPFI 260 (260)
T ss_pred HHHHHHHHHhcCChhhCcCH--------HHHhhCCCC
Confidence 99999999999999999987 566678885
No 345
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=2.9e-38 Score=271.90 Aligned_cols=252 Identities=21% Similarity=0.329 Sum_probs=199.7
Q ss_pred CCCCCeeEEeeeccCCeEEEEEEEEccCCc----EEEEEEeecCCc--chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCe
Q 022401 20 HDSDRYDFVRDIGSGNFGVARLMRDKVTKE----LVAVKYIERGDK--IDENVQREIINHRSLRHPNIVRFKEVILTPTH 93 (298)
Q Consensus 20 ~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~----~~aiK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 93 (298)
+..++|+..+.||+|++|.||++.+..++. .+++|.+..... ....+.+|+.++++++||||+++++++... .
T Consensus 4 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~ 82 (303)
T cd05110 4 LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-T 82 (303)
T ss_pred cchhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-C
Confidence 456789999999999999999999876665 468887764322 233578899999999999999999998654 4
Q ss_pred EEEEEeccCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCcccccc
Q 022401 94 LAIVMEYASGGELFERICNAG-RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 172 (298)
Q Consensus 94 ~~lv~~~~~~~sL~~~l~~~~-~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~ 172 (298)
.+++++++++++|.+.+.... .++...++.++.|++.||.|||++|++|+||+|+||+++.++. ++|+|||++....
T Consensus 83 ~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~--~kL~Dfg~~~~~~ 160 (303)
T cd05110 83 IQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNH--VKITDFGLARLLE 160 (303)
T ss_pred ceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCc--eEEcccccccccc
Confidence 678999999999999986644 5889999999999999999999999999999999999988776 9999999987443
Q ss_pred CCCC---CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCC
Q 022401 173 LHSQ---PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTN 248 (298)
Q Consensus 173 ~~~~---~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (298)
.... .....++..|++||.+.+..++.+ +||||||+++|++++ |..||..... ... ..+.......+...
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~-~DiwslG~~l~el~t~g~~p~~~~~~-~~~----~~~~~~~~~~~~~~ 234 (303)
T cd05110 161 GDEKEYNADGGKMPIKWMALECIHYRKFTHQ-SDVWSYGVTIWELMTFGGKPYDGIPT-REI----PDLLEKGERLPQPP 234 (303)
T ss_pred CcccccccCCCccccccCCHHHhccCCCChH-HHHHHHHHHHHHHHhCCCCCCCCCCH-HHH----HHHHHCCCCCCCCC
Confidence 2221 112234568999999877776555 999999999999997 8899976542 112 22223333334445
Q ss_pred CCCHHHHHHHHHhhhhCCCCcccccccchhhh
Q 022401 249 PISQECRDLISRIFVADPAAVSIFFFPLNMSC 280 (298)
Q Consensus 249 ~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~ 280 (298)
..+..+.+++.+||..||++||++.+++....
T Consensus 235 ~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~ 266 (303)
T cd05110 235 ICTIDVYMVMVKCWMIDADSRPKFKELAAEFS 266 (303)
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 57889999999999999999999999886543
No 346
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-40 Score=290.84 Aligned_cols=252 Identities=30% Similarity=0.469 Sum_probs=207.6
Q ss_pred eeeccCCeEEEEEEEEccCCcEEEEEEeec-CCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEeccCCCCHH
Q 022401 29 RDIGSGNFGVARLMRDKVTKELVAVKYIER-GDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELF 107 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~~~sL~ 107 (298)
-+||.|.+|+||.+++..+...+|||-+.. ..+..+-++.|+.+.++|+|.||++.+|.+..++++-+.||-.+||||.
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS 660 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence 379999999999999999999999998764 4445566889999999999999999999999999999999999999999
Q ss_pred HHHHhC-CCC--CHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCcccccc-CCCCCCCCCCC
Q 022401 108 ERICNA-GRF--SEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSV-LHSQPKSTVGT 183 (298)
Q Consensus 108 ~~l~~~-~~~--~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~-~~~~~~~~~~~ 183 (298)
+++... +++ ++.++-.+-+||++||.|||++.|||||||-+||+|+.-.. .+||+|||-+.+.. ......+..|+
T Consensus 661 sLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySG-vlKISDFGTsKRLAginP~TETFTGT 739 (1226)
T KOG4279|consen 661 SLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSG-VLKISDFGTSKRLAGINPCTETFTGT 739 (1226)
T ss_pred HHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccc-eEEecccccchhhccCCccccccccc
Confidence 999654 456 88999999999999999999999999999999999975332 49999999876433 33344566799
Q ss_pred CcccCccccccc-cCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhh
Q 022401 184 PAYIAPEVLLRH-EYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIF 262 (298)
Q Consensus 184 ~~~~aPE~~~~~-~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 262 (298)
..|||||++..+ ..+.+++|||||||.+.||.||.+||....++. ..+-++.-.....+.+..++++.+.||.+|+
T Consensus 740 LQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgspq---AAMFkVGmyKvHP~iPeelsaeak~FilrcF 816 (1226)
T KOG4279|consen 740 LQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQ---AAMFKVGMYKVHPPIPEELSAEAKNFILRCF 816 (1226)
T ss_pred hhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChh---HhhhhhcceecCCCCcHHHHHHHHHHHHHHc
Confidence 999999998654 445777999999999999999999999877643 2222222222333445557899999999999
Q ss_pred hhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 263 VADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 263 ~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
.+||.+||++ .++++-||++..
T Consensus 817 epd~~~R~sA--------~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 817 EPDPCDRPSA--------KDLLQDPFLQHN 838 (1226)
T ss_pred CCCcccCccH--------HHhccCcccccC
Confidence 9999999988 555577888755
No 347
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1.6e-38 Score=268.65 Aligned_cols=244 Identities=24% Similarity=0.369 Sum_probs=193.8
Q ss_pred eeeccCCeEEEEEEEEccCC------cEEEEEEeecCC--cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEec
Q 022401 29 RDIGSGNFGVARLMRDKVTK------ELVAVKYIERGD--KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY 100 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~~~~------~~~aiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~ 100 (298)
+.||+|++|.||.++..... ..+++|.+.... .....+.+|+.++++++||||+++++++......++++|+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 36899999999999986433 679999876543 3456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHhC-------CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCC---CCCEEEeecCcccc
Q 022401 101 ASGGELFERICNA-------GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSP---APRLKICDFGYSKS 170 (298)
Q Consensus 101 ~~~~sL~~~l~~~-------~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~---~~~~~l~d~~~~~~ 170 (298)
+++++|.+++... ..++..++..++.+++.|++|||+.+++|+||+|+||+++.++ ...++|+|||++..
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~ 160 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARD 160 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccccc
Confidence 9999999998642 3378899999999999999999999999999999999998766 12499999998864
Q ss_pred ccCCC---CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCC
Q 022401 171 SVLHS---QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPD 246 (298)
Q Consensus 171 ~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (298)
..... .......+..|+|||.+.+...+.+ +||||||+++|+|++ |..||...+..+ ....+.. ......
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Dv~slG~il~ellt~g~~p~~~~~~~~----~~~~~~~-~~~~~~ 234 (269)
T cd05044 161 IYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQ-SDVWSFGVLMWEILTLGQQPYPALNNQE----VLQHVTA-GGRLQK 234 (269)
T ss_pred cccccccccCcccCCCccccCHHHHccCCcccc-hhHHHHHHHHHHHHHcCCCCCcccCHHH----HHHHHhc-CCccCC
Confidence 33221 1122344678999999887777555 999999999999998 999997654422 2222222 222233
Q ss_pred CCCCCHHHHHHHHHhhhhCCCCcccccccchh
Q 022401 247 TNPISQECRDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 247 ~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
....|.++.+++.+||+.+|.+||++.++++.
T Consensus 235 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 266 (269)
T cd05044 235 PENCPDKIYQLMTNCWAQDPSERPTFDRIQEI 266 (269)
T ss_pred cccchHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 44578999999999999999999999887753
No 348
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=2.4e-38 Score=277.12 Aligned_cols=255 Identities=23% Similarity=0.369 Sum_probs=196.8
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC---cchHHHHHHHHHHhcCCCCCeeeeeEEEEeC------C
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD---KIDENVQREIINHRSLRHPNIVRFKEVILTP------T 92 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~ 92 (298)
.++|++.+.||+|+||.||.+.+..++..||+|++.... .....+.+|+.++++++||||+++.+++... .
T Consensus 16 ~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (345)
T cd07877 16 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 95 (345)
T ss_pred cCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccc
Confidence 478999999999999999999998889999999887532 2235677899999999999999999988643 3
Q ss_pred eEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCcccccc
Q 022401 93 HLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 172 (298)
Q Consensus 93 ~~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~ 172 (298)
..+++++++ +++|.+.+.. ..+++..++.++.|++.|++|||+.|++|+||+|+||++++++. ++|+|||++....
T Consensus 96 ~~~lv~~~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~--~kl~dfg~~~~~~ 171 (345)
T cd07877 96 DVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE--LKILDFGLARHTD 171 (345)
T ss_pred cEEEEehhc-ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCC--EEEeccccccccc
Confidence 468888877 6788877754 46899999999999999999999999999999999999998887 9999999886432
Q ss_pred CCCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHh--------------
Q 022401 173 LHSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRIL-------------- 238 (298)
Q Consensus 173 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~-------------- 238 (298)
. ......++..|+|||.+.+......++||||+|+++|+|++|..||...+....+........
T Consensus 172 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (345)
T cd07877 172 D--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 249 (345)
T ss_pred c--cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHh
Confidence 2 222345677899999876643334459999999999999999999976554333322211110
Q ss_pred -----hcCCCCCC------CCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhh
Q 022401 239 -----SVQYSVPD------TNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMF 290 (298)
Q Consensus 239 -----~~~~~~~~------~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~ 290 (298)
......+. ....+.++.++|.+||+.||.+||++.++ ++|||+.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~--------l~h~~f~ 304 (345)
T cd07877 250 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQA--------LAHAYFA 304 (345)
T ss_pred HHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHH--------hcChhhh
Confidence 00000000 11357889999999999999999987544 4666665
No 349
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=2.5e-38 Score=267.59 Aligned_cols=244 Identities=20% Similarity=0.314 Sum_probs=186.7
Q ss_pred eeeccCCeEEEEEEEEcc--CCcEEEEEEeecCCc--chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEeccCCC
Q 022401 29 RDIGSGNFGVARLMRDKV--TKELVAVKYIERGDK--IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGG 104 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~~--~~~~~aiK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~~~ 104 (298)
+.||+|+||.||++.... ....+++|.+..... ....+.+|+..++.++|+||+++++.+.....+++|+||++++
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 368999999999996532 345688887654322 2345778999999999999999999999999999999999999
Q ss_pred CHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC---C
Q 022401 105 ELFERICNAG-----RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS---Q 176 (298)
Q Consensus 105 sL~~~l~~~~-----~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~---~ 176 (298)
+|.+++.... ..+...+..++.|++.|++|||++|++|+||||+||+++.++. ++|+|||++....... .
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~--~kl~dfg~~~~~~~~~~~~~ 158 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLS--VKIGDYGLALEQYPEDYYIT 158 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCc--EEEeccccccccccchheec
Confidence 9999986543 2457788999999999999999999999999999999998887 9999999875332211 1
Q ss_pred CCCCCCCCcccCccccccc------cCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCC---C
Q 022401 177 PKSTVGTPAYIAPEVLLRH------EYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVP---D 246 (298)
Q Consensus 177 ~~~~~~~~~~~aPE~~~~~------~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~---~ 246 (298)
.....++..|+|||..... ...+.++||||||+++|+|++ |..||......+.+..... ......+ .
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~ 235 (269)
T cd05042 159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVR---EQDIKLPKPQL 235 (269)
T ss_pred cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhh---ccCccCCCCcc
Confidence 1233455679999987532 223445999999999999999 7788877654333322222 2222222 2
Q ss_pred CCCCCHHHHHHHHHhhhhCCCCcccccccchh
Q 022401 247 TNPISQECRDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 247 ~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
...++..+.+++..|| .||++|||+.++++.
T Consensus 236 ~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~ 266 (269)
T cd05042 236 DLKYSDRWYEVMQFCW-LDPETRPTAEEVHEL 266 (269)
T ss_pred cccCCHHHHHHHHHHh-cCcccccCHHHHHHH
Confidence 3357889999999998 599999999988864
No 350
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=3.2e-38 Score=272.20 Aligned_cols=249 Identities=26% Similarity=0.409 Sum_probs=197.4
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEE
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
..|+..+.||+|++|.||.+++..++..+++|.+.... .....+.+|+.+++.++|+|++++.+++......++|+
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 45888999999999999999998889999999886432 22345678999999999999999999999999999999
Q ss_pred eccCCCCHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCC
Q 022401 99 EYASGGELFERIC-NAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP 177 (298)
Q Consensus 99 ~~~~~~sL~~~l~-~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~ 177 (298)
||+.+ ++.+.+. ...++++.++..++.+++.++.|||+.+++|+||+|+||+++.++. ++|+|||++..... .
T Consensus 95 e~~~~-~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~--~kl~dfg~~~~~~~---~ 168 (308)
T cd06634 95 EYCLG-SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGL--VKLGDFGSASIMAP---A 168 (308)
T ss_pred EccCC-CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCc--EEECCcccceeecC---c
Confidence 99964 7766664 4556899999999999999999999999999999999999988876 99999998764322 2
Q ss_pred CCCCCCCcccCcccccc---ccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHH
Q 022401 178 KSTVGTPAYIAPEVLLR---HEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQEC 254 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~---~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (298)
....++..|+|||.+.+ ...+. ++||||||+++|++++|..||...+..... ..+.............+..+
T Consensus 169 ~~~~~~~~y~aPE~~~~~~~~~~~~-~~Di~slG~il~el~~g~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 243 (308)
T cd06634 169 NXFVGTPYWMAPEVILAMDEGQYDG-KVDVWSLGITCIELAERKPPLFNMNAMSAL----YHIAQNESPALQSGHWSEYF 243 (308)
T ss_pred ccccCCccccCHHHHhhcccCCCCc-ccchHHHHHHHHHHHcCCCCCccccHHHHH----HHHhhcCCCCcCcccccHHH
Confidence 23456788999998753 23434 499999999999999999998765432221 12222222222233478899
Q ss_pred HHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhh
Q 022401 255 RDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMF 290 (298)
Q Consensus 255 ~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~ 290 (298)
.++|.+||+.+|.+||++.+ ++.|||+.
T Consensus 244 ~~li~~cl~~~P~~Rp~~~~--------ll~~~~~~ 271 (308)
T cd06634 244 RNFVDSCLQKIPQDRPTSEV--------LLKHRFVL 271 (308)
T ss_pred HHHHHHHhhCCcccCCCHHH--------HhhCcccc
Confidence 99999999999999998844 44666654
No 351
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=2.8e-38 Score=265.58 Aligned_cols=239 Identities=21% Similarity=0.193 Sum_probs=189.6
Q ss_pred eeeccCCeEEEEEEEEccCC----------cEEEEEEeecCCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEE
Q 022401 29 RDIGSGNFGVARLMRDKVTK----------ELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~~~~----------~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
+.||+|+||.||++.+..++ ..+++|.+.........+.+|+.++++++|||++++++++.. ...++|+
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~ 79 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVE 79 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEE
Confidence 46899999999999998666 357888776554446778899999999999999999999988 7789999
Q ss_pred eccCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCC-----CEEEeecCcccccc
Q 022401 99 EYASGGELFERICNAG-RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAP-----RLKICDFGYSKSSV 172 (298)
Q Consensus 99 ~~~~~~sL~~~l~~~~-~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~-----~~~l~d~~~~~~~~ 172 (298)
||+++++|.+++.... .++...+..++.|++.||+|||+.|++|+||+|+||+++.++.. .++|+|||++....
T Consensus 80 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~ 159 (259)
T cd05037 80 EYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVL 159 (259)
T ss_pred EcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCcccccc
Confidence 9999999999997666 78999999999999999999999999999999999999877621 49999999886433
Q ss_pred CCCCCCCCCCCCcccCccccccc-cCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCC
Q 022401 173 LHSQPKSTVGTPAYIAPEVLLRH-EYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPI 250 (298)
Q Consensus 173 ~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (298)
. .....+...|+|||++... .....++|+||||++++++++ |..||....... ..... ......+.. .
T Consensus 160 ~---~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~-~~~~~----~~~~~~~~~--~ 229 (259)
T cd05037 160 S---REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSE-KERFY----QDQHRLPMP--D 229 (259)
T ss_pred c---ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchh-HHHHH----hcCCCCCCC--C
Confidence 2 2233456679999998766 233444999999999999999 577887654221 11111 112222222 2
Q ss_pred CHHHHHHHHHhhhhCCCCcccccccchh
Q 022401 251 SQECRDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 251 ~~~l~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
...+.+++.+||+.||.+|||+.++++.
T Consensus 230 ~~~~~~li~~~l~~~p~~Rpt~~~il~~ 257 (259)
T cd05037 230 CAELANLINQCWTYDPTKRPSFRAILRD 257 (259)
T ss_pred chHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 4789999999999999999999888753
No 352
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=2.6e-38 Score=262.73 Aligned_cols=234 Identities=20% Similarity=0.243 Sum_probs=189.9
Q ss_pred CCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEeccCCCCHHHHHHhC
Q 022401 34 GNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNA 113 (298)
Q Consensus 34 g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~~~sL~~~l~~~ 113 (298)
|.++.||++++..+++.+|+|.+..... ..+|...+....|||++++++++......++++||+++++|.+.+...
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~ 79 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSE----YSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKF 79 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhh----hhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHh
Confidence 8899999999999999999999876532 233444444567999999999999999999999999999999999887
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCCCCCCCCCcccCccccc
Q 022401 114 GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLL 193 (298)
Q Consensus 114 ~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~ 193 (298)
..+++..+..++.|++.||+|||+.|++|+||+|+||+++.++. ++++|||.+...... .....++..|+|||...
T Consensus 80 ~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~--~~l~df~~~~~~~~~--~~~~~~~~~y~aPE~~~ 155 (237)
T cd05576 80 LNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGH--IQLTYFSRWSEVEDS--CDGEAVENMYCAPEVGG 155 (237)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCC--EEEecccchhccccc--cccCCcCccccCCcccC
Confidence 78999999999999999999999999999999999999998887 999999976533222 22334566799999987
Q ss_pred cccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCccccc
Q 022401 194 RHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFF 273 (298)
Q Consensus 194 ~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ 273 (298)
+..++.+ +|+||+|+++|++++|..|+...... .........+..++..+.++|.+||+.||++||++.
T Consensus 156 ~~~~~~~-~DvwslG~il~el~~g~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~ 224 (237)
T cd05576 156 ISEETEA-CDWWSLGAILFELLTGKTLVECHPSG----------INTHTTLNIPEWVSEEARSLLQQLLQFNPTERLGAG 224 (237)
T ss_pred CCCCCch-hhHHHHHHHHHHHHHCcchhhcCchh----------cccccccCCcccCCHHHHHHHHHHccCCHHHhcCCC
Confidence 6666555 99999999999999999887643211 011111223344789999999999999999999975
Q ss_pred ccchhhhHHHhhhhhh
Q 022401 274 FPLNMSCLLLFSFVWM 289 (298)
Q Consensus 274 ~~l~~~~~~~~~hp~~ 289 (298)
+.. ..++++|||+
T Consensus 225 ~~~---~~~~~~h~~~ 237 (237)
T cd05576 225 VAG---VEDIKSHPFF 237 (237)
T ss_pred ccc---hHHHHcCCCC
Confidence 553 5788999996
No 353
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=6.2e-38 Score=264.36 Aligned_cols=240 Identities=21% Similarity=0.238 Sum_probs=185.9
Q ss_pred eeeccCCeEEEEEEEEcc------------CCcEEEEEEeecCCc-chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEE
Q 022401 29 RDIGSGNFGVARLMRDKV------------TKELVAVKYIERGDK-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLA 95 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~~------------~~~~~aiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 95 (298)
+.||.|+||.||++.... ....+++|.+..... ....+.+|+.+++.++||||+++++++..+...+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 468999999999998532 233588887655432 2346778899999999999999999999988999
Q ss_pred EEEeccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCC-----CCEEEeecCccc
Q 022401 96 IVMEYASGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPA-----PRLKICDFGYSK 169 (298)
Q Consensus 96 lv~~~~~~~sL~~~l~~-~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~-----~~~~l~d~~~~~ 169 (298)
+++||+++++|..++.. ...+++..++.++.|++.|++|||++|++|+||+|+||+++.++. ..++++|||++.
T Consensus 81 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~ 160 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPI 160 (262)
T ss_pred EEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCc
Confidence 99999999999888865 456899999999999999999999999999999999999976543 138999999875
Q ss_pred cccCCCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHH-hCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCC
Q 022401 170 SSVLHSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVML-VGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTN 248 (298)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~-~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (298)
.... .....++..|+|||.+......+.++||||||+++|+|+ +|..||......+ ...+........ .
T Consensus 161 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-----~~~~~~~~~~~~--~ 230 (262)
T cd05077 161 TVLS---RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE-----KERFYEGQCMLV--T 230 (262)
T ss_pred cccC---cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH-----HHHHHhcCccCC--C
Confidence 3321 123346678999998865444445599999999999997 5788877643211 112222222222 2
Q ss_pred CCCHHHHHHHHHhhhhCCCCcccccccchh
Q 022401 249 PISQECRDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 249 ~~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
..++++.+++.+||+.||.+||++.++++.
T Consensus 231 ~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 231 PSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred CChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 246889999999999999999999888763
No 354
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.3e-37 Score=266.77 Aligned_cols=251 Identities=15% Similarity=0.140 Sum_probs=188.2
Q ss_pred CCCCCeeEEeeeccCCeEEEEEEEEccC---CcEEEEEEeecCCcch--H----------HHHHHHHHHhcCCCCCeeee
Q 022401 20 HDSDRYDFVRDIGSGNFGVARLMRDKVT---KELVAVKYIERGDKID--E----------NVQREIINHRSLRHPNIVRF 84 (298)
Q Consensus 20 ~~~~~y~~~~~lg~g~~~~vy~~~~~~~---~~~~aiK~~~~~~~~~--~----------~~~~e~~~l~~l~h~~i~~~ 84 (298)
...++|++.+.||+|+||.||++.+..+ +..+++|......... + ....+...+..+.|+|++++
T Consensus 9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~ 88 (294)
T PHA02882 9 ITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKY 88 (294)
T ss_pred cCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcE
Confidence 4457999999999999999999998776 6677777644332211 1 11223344566789999999
Q ss_pred eEEEEeCC----eEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCE
Q 022401 85 KEVILTPT----HLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRL 160 (298)
Q Consensus 85 ~~~~~~~~----~~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~ 160 (298)
++++.... ..++++++.. .++.+.+......++..+..++.|++.|++|||+.+++||||||+||+++.++. +
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~--~ 165 (294)
T PHA02882 89 YGCGSFKRCRMYYRFILLEKLV-ENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNR--G 165 (294)
T ss_pred EEeeeEecCCceEEEEEEehhc-cCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCc--E
Confidence 99866543 3467777763 467777766656788899999999999999999999999999999999988776 9
Q ss_pred EEeecCccccccCCC--------CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHH
Q 022401 161 KICDFGYSKSSVLHS--------QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRK 232 (298)
Q Consensus 161 ~l~d~~~~~~~~~~~--------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~ 232 (298)
+|+|||+++...... ......+++.|+|||.+.+..++.+ +||||||+++++|++|..||...........
T Consensus 166 ~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~-~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~ 244 (294)
T PHA02882 166 YIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRR-GDLESLGYCMLKWAGIKLPWKGFGHNGNLIH 244 (294)
T ss_pred EEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcH-HHHHHHHHHHHHHHhCCCCCCccccchHHHH
Confidence 999999986442211 1122358899999999887777655 9999999999999999999987743332221
Q ss_pred -----HHHHHhhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccch
Q 022401 233 -----TIQRILSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 233 -----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~ 277 (298)
...++...... ....+.++.+++..|++.+|++||++.++++
T Consensus 245 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 245 AAKCDFIKRLHEGKIK---IKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred HhHHHHHHHhhhhhhc---cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 12222222222 2346899999999999999999999988764
No 355
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1.1e-37 Score=262.52 Aligned_cols=243 Identities=23% Similarity=0.293 Sum_probs=188.4
Q ss_pred eeeccCCeEEEEEEEEcc---CCcEEEEEEeecC--CcchHHHHHHHHHHhcCCCCCeeeeeEEEE-eCCeEEEEEeccC
Q 022401 29 RDIGSGNFGVARLMRDKV---TKELVAVKYIERG--DKIDENVQREIINHRSLRHPNIVRFKEVIL-TPTHLAIVMEYAS 102 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~~---~~~~~aiK~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~~~~~ 102 (298)
+.||+|+||.||++.... .+..+|+|.+... ......+.+|+.+++.++|||++++++++. .+...+++++|+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 468999999999998643 3457999987542 223456778999999999999999999875 4556889999999
Q ss_pred CCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC-----CC
Q 022401 103 GGELFERICNA-GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH-----SQ 176 (298)
Q Consensus 103 ~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~-----~~ 176 (298)
+++|.+++... ...+...+..++.+++.||.|||+.+++|+||+|+||++++++. ++|+|||++...... ..
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~--~kl~dfg~~~~~~~~~~~~~~~ 158 (262)
T cd05058 81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFT--VKVADFGLARDIYDKEYYSVHN 158 (262)
T ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCc--EEECCccccccccCCcceeecc
Confidence 99999998754 34677888999999999999999999999999999999998877 999999988633221 11
Q ss_pred CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhC-CCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHH
Q 022401 177 PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVG-GYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECR 255 (298)
Q Consensus 177 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 255 (298)
.....++..|+|||.+.+..++.+ +||||||+++|+|++| ..||...+.. .....+..+ ...+.....|+.+.
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~-~Di~slG~~l~el~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~ 232 (262)
T cd05058 159 HTGAKLPVKWMALESLQTQKFTTK-SDVWSFGVLLWELMTRGAPPYPDVDSF----DITVYLLQG-RRLLQPEYCPDPLY 232 (262)
T ss_pred cccCcCCccccChhHhccCccchH-HHHHHHHHHHHHHHcCCCCCCCCCCHH----HHHHHHhcC-CCCCCCCcCCHHHH
Confidence 122334668999999877777665 9999999999999995 5566543322 222222222 22233344689999
Q ss_pred HHHHHhhhhCCCCcccccccchhh
Q 022401 256 DLISRIFVADPAAVSIFFFPLNMS 279 (298)
Q Consensus 256 ~li~~~l~~dp~~Rps~~~~l~~~ 279 (298)
+++.+||+.+|++||++.+++.+.
T Consensus 233 ~li~~cl~~~p~~Rp~~~~il~~l 256 (262)
T cd05058 233 EVMLSCWHPKPEMRPTFSELVSRI 256 (262)
T ss_pred HHHHHHcCCChhhCCCHHHHHHHH
Confidence 999999999999999999988643
No 356
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.8e-38 Score=267.02 Aligned_cols=240 Identities=19% Similarity=0.221 Sum_probs=188.6
Q ss_pred eeeccCCeEEEEEEEEccCCc-------EEEEEEeecCC-cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEec
Q 022401 29 RDIGSGNFGVARLMRDKVTKE-------LVAVKYIERGD-KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY 100 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~~~~~-------~~aiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~ 100 (298)
+.||.|+||.||++.+...+. .+++|...... ...+.+.+|..+++.++|||++++++++..+...++|+||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 469999999999999865443 38888775443 2345678899999999999999999999998899999999
Q ss_pred cCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCC------CEEEeecCccccccC
Q 022401 101 ASGGELFERICNAG-RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAP------RLKICDFGYSKSSVL 173 (298)
Q Consensus 101 ~~~~sL~~~l~~~~-~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~------~~~l~d~~~~~~~~~ 173 (298)
+++++|.+++.... .++...+..++.|++.||.|||+.|++|+||+|+||+++.++.. .++++|||.+.....
T Consensus 81 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~ 160 (258)
T cd05078 81 VKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLP 160 (258)
T ss_pred CCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccccCC
Confidence 99999999997644 58999999999999999999999999999999999999877652 269999998753322
Q ss_pred CCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCC-CCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCH
Q 022401 174 HSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGG-YPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQ 252 (298)
Q Consensus 174 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~-~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (298)
.....++..|+|||.+.+......++||||||+++|++++|. .||........ ..+.......+. ..+.
T Consensus 161 ---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~-----~~~~~~~~~~~~--~~~~ 230 (258)
T cd05078 161 ---KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKK-----LQFYEDRHQLPA--PKWT 230 (258)
T ss_pred ---chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHH-----HHHHHccccCCC--CCcH
Confidence 223456778999999876544344599999999999999985 56554332211 112222222222 3568
Q ss_pred HHHHHHHHhhhhCCCCcccccccchh
Q 022401 253 ECRDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 253 ~l~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
++.+++.+||+.||++|||+.++++.
T Consensus 231 ~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 231 ELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred HHHHHHHHHhccChhhCCCHHHHHHh
Confidence 99999999999999999999888863
No 357
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=6.9e-38 Score=265.78 Aligned_cols=239 Identities=22% Similarity=0.263 Sum_probs=185.6
Q ss_pred eeccCCeEEEEEEEEcc------------------------CCcEEEEEEeecCCc-chHHHHHHHHHHhcCCCCCeeee
Q 022401 30 DIGSGNFGVARLMRDKV------------------------TKELVAVKYIERGDK-IDENVQREIINHRSLRHPNIVRF 84 (298)
Q Consensus 30 ~lg~g~~~~vy~~~~~~------------------------~~~~~aiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~ 84 (298)
.||+|+||.||++.... ....+++|.+..... ....+.+|+.++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 69999999999987532 123588888765432 23467788999999999999999
Q ss_pred eEEEEeCCeEEEEEeccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCC-----C
Q 022401 85 KEVILTPTHLAIVMEYASGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPA-----P 158 (298)
Q Consensus 85 ~~~~~~~~~~~lv~~~~~~~sL~~~l~~-~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~-----~ 158 (298)
++++..+...++|+||+++++|...+.. .+.+++..+..++.|++.||+|||++|++|+||+|+||+++..+. .
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~ 161 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSP 161 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccc
Confidence 9999999999999999999999988865 557899999999999999999999999999999999999975432 2
Q ss_pred CEEEeecCccccccCCCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHH-hCCCCCCCCCCchhHHHHHHHH
Q 022401 159 RLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVML-VGGYPFEDPDEPKDFRKTIQRI 237 (298)
Q Consensus 159 ~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~-~g~~pf~~~~~~~~~~~~~~~~ 237 (298)
.++++|||.+..... .....++..|+|||.+.+......++||||||+++|+++ +|..||........ .. .
T Consensus 162 ~~kl~d~g~~~~~~~---~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~-~~----~ 233 (274)
T cd05076 162 FIKLSDPGVSFTALS---REERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK-ER----F 233 (274)
T ss_pred eeeecCCcccccccc---ccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHH-HH----H
Confidence 489999997643221 122345677999998876443345599999999999984 68899976543221 11 1
Q ss_pred hhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchh
Q 022401 238 LSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 238 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
.......+. ..++++.+++.+||+.+|.+|||+.++++.
T Consensus 234 ~~~~~~~~~--~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 234 YEKKHRLPE--PSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred HHhccCCCC--CCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 122222222 246789999999999999999999888864
No 358
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-39 Score=282.17 Aligned_cols=247 Identities=28% Similarity=0.446 Sum_probs=206.4
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcch----HHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEe
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKID----ENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVME 99 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~ 99 (298)
.|.-++.||.|+||.||.|++..+...||||....+.+.. .++.+|+..|+++.|||.+...||+..+...++|||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 4788899999999999999999999999999987654333 457799999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCCC
Q 022401 100 YASGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK 178 (298)
Q Consensus 100 ~~~~~sL~~~l~~-~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~~ 178 (298)
||- ||-.+++.- ..++.+.++..|..+.+.||.|||+.+.+|||||..||+++..|. |||+|||.+... .+..
T Consensus 107 YCl-GSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~--VKLaDFGSAsi~---~PAn 180 (948)
T KOG0577|consen 107 YCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGL--VKLADFGSASIM---APAN 180 (948)
T ss_pred HHh-ccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCe--eeeccccchhhc---Cchh
Confidence 994 477777753 457899999999999999999999999999999999999999998 999999987533 4556
Q ss_pred CCCCCCcccCccccc---cccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHH-hhcCCCCCCCCCCCHHH
Q 022401 179 STVGTPAYIAPEVLL---RHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRI-LSVQYSVPDTNPISQEC 254 (298)
Q Consensus 179 ~~~~~~~~~aPE~~~---~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l 254 (298)
...|+|+|||||++. .+.|+.+ +||||||++..|+....+|+-.-+. -.....| .+..+.++ .+.+++.+
T Consensus 181 sFvGTPywMAPEVILAMDEGqYdgk-vDvWSLGITCIELAERkPPlFnMNA----MSALYHIAQNesPtLq-s~eWS~~F 254 (948)
T KOG0577|consen 181 SFVGTPYWMAPEVILAMDEGQYDGK-VDVWSLGITCIELAERKPPLFNMNA----MSALYHIAQNESPTLQ-SNEWSDYF 254 (948)
T ss_pred cccCCccccchhHheeccccccCCc-cceeeccchhhhhhhcCCCccCchH----HHHHHHHHhcCCCCCC-CchhHHHH
Confidence 788999999999875 4567787 9999999999999999988655333 2222233 33333333 55589999
Q ss_pred HHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhh
Q 022401 255 RDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMF 290 (298)
Q Consensus 255 ~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~ 290 (298)
+.||..||++=|.+|||. ..+|-|+|+.
T Consensus 255 ~~Fvd~CLqKipqeRpts--------e~ll~H~fv~ 282 (948)
T KOG0577|consen 255 RNFVDSCLQKIPQERPTS--------EELLKHRFVL 282 (948)
T ss_pred HHHHHHHHhhCcccCCcH--------HHHhhcchhc
Confidence 999999999999999987 5556778775
No 359
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=3.2e-37 Score=260.86 Aligned_cols=247 Identities=20% Similarity=0.267 Sum_probs=186.4
Q ss_pred eeeccCCeEEEEEEEEccC--CcEEEEEEeecCC--cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEeccCCC
Q 022401 29 RDIGSGNFGVARLMRDKVT--KELVAVKYIERGD--KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGG 104 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~~~--~~~~aiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~~~ 104 (298)
+.||+|+||.||+++.... ...+++|.+.... ...+.+.+|+.+++.++|||++++++.+......++|+||++++
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 3589999999999976433 3346677665432 23457889999999999999999999999999999999999999
Q ss_pred CHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC---CCC
Q 022401 105 ELFERICNA----GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH---SQP 177 (298)
Q Consensus 105 sL~~~l~~~----~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~---~~~ 177 (298)
+|.+++.+. ...+...++.++.|++.||+|||+.+++|+||+|+||+++.++. ++|+|||++...... ...
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~--~~l~Dfg~~~~~~~~~~~~~~ 158 (268)
T cd05086 81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLT--VKVGDYGIGPSRYKEDYIETE 158 (268)
T ss_pred cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCcc--EEecccccccccCcchhhhcc
Confidence 999998754 23567778899999999999999999999999999999998887 999999987532211 112
Q ss_pred CCCCCCCcccCcccccccc------CCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCC
Q 022401 178 KSTVGTPAYIAPEVLLRHE------YDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPI 250 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~------~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (298)
....++..|+|||.+.... ..+.++||||||+++|+|++ |..||......+..............+......+
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (268)
T cd05086 159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPY 238 (268)
T ss_pred cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCC
Confidence 2345678899999875321 11345999999999999997 4668876554443333332222111222223347
Q ss_pred CHHHHHHHHHhhhhCCCCcccccccchh
Q 022401 251 SQECRDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 251 ~~~l~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
++.+.+++..|| .+|.+||++.++++.
T Consensus 239 ~~~~~~l~~~c~-~~P~~Rp~~~~i~~~ 265 (268)
T cd05086 239 SERWYEVLQFCW-LSPEKRATAEEVHRL 265 (268)
T ss_pred cHHHHHHHHHHh-hCcccCCCHHHHHHH
Confidence 889999999999 789999999988753
No 360
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=2.4e-37 Score=262.06 Aligned_cols=245 Identities=21% Similarity=0.353 Sum_probs=192.0
Q ss_pred eeEEeeeccCCeEEEEEEEEc---cCCcEEEEEEeecCC---cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCC------
Q 022401 25 YDFVRDIGSGNFGVARLMRDK---VTKELVAVKYIERGD---KIDENVQREIINHRSLRHPNIVRFKEVILTPT------ 92 (298)
Q Consensus 25 y~~~~~lg~g~~~~vy~~~~~---~~~~~~aiK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------ 92 (298)
|.+.+.||+|++|.||++... .++..+|+|++.... ...+.+.+|+.++++++|||++++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 678899999999999999864 356889999887543 23456788999999999999999999886532
Q ss_pred eEEEEEeccCCCCHHHHHHhC------CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecC
Q 022401 93 HLAIVMEYASGGELFERICNA------GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFG 166 (298)
Q Consensus 93 ~~~lv~~~~~~~sL~~~l~~~------~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~ 166 (298)
..+++++|+.+++|..++... ..++...++.++.|++.|++|||+.|++|+||+|+||+++.++. ++|+|||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~--~kl~dfg 158 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMT--VCVADFG 158 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCC--EEECccc
Confidence 347889999999998776422 24788999999999999999999999999999999999988776 9999999
Q ss_pred ccccccCCC---CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCC
Q 022401 167 YSKSSVLHS---QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQY 242 (298)
Q Consensus 167 ~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~ 242 (298)
.+....... ......+.+.|++||.+....++.+ +||||||+++|++++ |..||...+.. +....+....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~-sDi~slG~il~el~~~g~~p~~~~~~~----~~~~~~~~~~- 232 (273)
T cd05074 159 LSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTH-SDVWAFGVTMWEIMTRGQTPYAGVENS----EIYNYLIKGN- 232 (273)
T ss_pred ccccccCCcceecCCCccCchhhcCHhHHhcCccchh-hhhHHHHHHHHHHhhCCCCCCCCCCHH----HHHHHHHcCC-
Confidence 887443221 1122334567999999877766655 999999999999999 78888765432 2222222222
Q ss_pred CCCCCCCCCHHHHHHHHHhhhhCCCCcccccccch
Q 022401 243 SVPDTNPISQECRDLISRIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 243 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~ 277 (298)
........+.++.+++.+||+.+|.+|||+.+++.
T Consensus 233 ~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~ 267 (273)
T cd05074 233 RLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRD 267 (273)
T ss_pred cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 22223346899999999999999999999988875
No 361
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=4.4e-37 Score=289.07 Aligned_cols=147 Identities=30% Similarity=0.454 Sum_probs=134.2
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc----chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEE
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK----IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAI 96 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 96 (298)
..++|++++.||+|+||.||++.+..+++.||+|++..... ....+..|+.++..++||||+++++++.....+|+
T Consensus 2 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 81 (669)
T cd05610 2 SIEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYL 81 (669)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEE
Confidence 35789999999999999999999998999999999875422 23567789999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccc
Q 022401 97 VMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK 169 (298)
Q Consensus 97 v~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~ 169 (298)
||||+.+++|.+++.....+++..++.++.||+.||+|||+.||+|+||||+||+++.++. ++|+|||++.
T Consensus 82 VmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~--vkL~DFGls~ 152 (669)
T cd05610 82 VMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGH--IKLTDFGLSK 152 (669)
T ss_pred EEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCC--EEEEeCCCCc
Confidence 9999999999999988888999999999999999999999999999999999999998876 9999999864
No 362
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-38 Score=279.28 Aligned_cols=252 Identities=31% Similarity=0.426 Sum_probs=208.8
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhc-CCCCCeeeeeEEEEeCCeEEEEEec
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRS-LRHPNIVRFKEVILTPTHLAIVMEY 100 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~~~ 100 (298)
.+.|++...+|.|+|+.|-.+.+..++...++|++.+.. ....+|+.++.. -+|||+++..+.+.+....|+|+|.
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~---~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~ 397 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA---DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMEL 397 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc---cccccccchhhhhcCCCcceeecceecCCceeeeeehh
Confidence 478999999999999999999999999999999998762 223445544443 4799999999999999999999999
Q ss_pred cCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEe-eCCCCCCEEEeecCccccccCCCCCCC
Q 022401 101 ASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLL-DGSPAPRLKICDFGYSKSSVLHSQPKS 179 (298)
Q Consensus 101 ~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv-~~~~~~~~~l~d~~~~~~~~~~~~~~~ 179 (298)
+.|+-+.+.+...+... .++..|+.+|+.++.|||++|++||||||+|||+ ++.++ ++|+|||.++..... ...
T Consensus 398 l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~--lrltyFG~a~~~~~~--~~t 472 (612)
T KOG0603|consen 398 LDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGH--LRLTYFGFWSELERS--CDT 472 (612)
T ss_pred ccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCc--EEEEEechhhhCchh--hcc
Confidence 99988888886666555 7888899999999999999999999999999999 56666 999999987644333 335
Q ss_pred CCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHH
Q 022401 180 TVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLIS 259 (298)
Q Consensus 180 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (298)
..-+..|.|||.+...+++.. +|+||||+++|+|++|..||...... .+...++..+.+. ..+|++.++||+
T Consensus 473 p~~t~~y~APEvl~~~~yt~a-cD~WSLGvlLy~ML~G~tp~~~~P~~---~ei~~~i~~~~~s----~~vS~~AKdLl~ 544 (612)
T KOG0603|consen 473 PALTLQYVAPEVLAIQEYTEA-CDWWSLGVLLYEMLTGRTLFAAHPAG---IEIHTRIQMPKFS----ECVSDEAKDLLQ 544 (612)
T ss_pred cchhhcccChhhhccCCCCcc-hhhHHHHHHHHHHHhCCCccccCCch---HHHHHhhcCCccc----cccCHHHHHHHH
Confidence 566788999999987777666 99999999999999999999987765 4455555555544 458999999999
Q ss_pred HhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 260 RIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 260 ~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
+||+.||.+|+++.+++.++|+ ++||++..
T Consensus 545 ~LL~~dP~~Rl~~~~i~~h~w~--~~~~t~p~ 574 (612)
T KOG0603|consen 545 QLLQVDPALRLGADEIGAHPWF--LSHPTFPP 574 (612)
T ss_pred HhccCChhhCcChhhhccCcch--hcCCCCCc
Confidence 9999999999999888866666 55555443
No 363
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-39 Score=266.80 Aligned_cols=263 Identities=29% Similarity=0.404 Sum_probs=212.7
Q ss_pred CCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCC-C-CC----eeeeeEEEEeCC
Q 022401 19 MHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLR-H-PN----IVRFKEVILTPT 92 (298)
Q Consensus 19 ~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~-h-~~----i~~~~~~~~~~~ 92 (298)
....++|++++.+|+|.||.|-.+.++.++..+|+|++..-.+..+...-|+++++++. + |+ ++.+.++|...+
T Consensus 85 D~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrg 164 (415)
T KOG0671|consen 85 DILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRG 164 (415)
T ss_pred cccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccC
Confidence 34468999999999999999999999989999999999887777888888999999993 2 33 677888899999
Q ss_pred eEEEEEeccCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCC--------------
Q 022401 93 HLAIVMEYASGGELFERICNAG--RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSP-------------- 156 (298)
Q Consensus 93 ~~~lv~~~~~~~sL~~~l~~~~--~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~-------------- 156 (298)
+.|+|+|.+ |.|+.+++.++. +++...+..+++|++.++++||+.+++|.||||+||++.++.
T Consensus 165 hiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~ 243 (415)
T KOG0671|consen 165 HICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFI 243 (415)
T ss_pred ceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCcccee
Confidence 999999998 679999997654 688999999999999999999999999999999999984221
Q ss_pred ----CCCEEEeecCccccccCCCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHH
Q 022401 157 ----APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRK 232 (298)
Q Consensus 157 ----~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~ 232 (298)
...++|+|||.++..... ...-..|..|.|||++.+-+++.+ +||||+||+|.|+.+|...|+..++.+.+ +
T Consensus 244 r~~ks~~I~vIDFGsAtf~~e~--hs~iVsTRHYRAPEViLgLGwS~p-CDvWSiGCIL~ElytG~~LFqtHen~EHL-a 319 (415)
T KOG0671|consen 244 RPLKSTAIKVIDFGSATFDHEH--HSTIVSTRHYRAPEVILGLGWSQP-CDVWSIGCILVELYTGETLFQTHENLEHL-A 319 (415)
T ss_pred ccCCCcceEEEecCCcceeccC--cceeeeccccCCchheeccCcCCc-cCceeeeeEEEEeeccceecccCCcHHHH-H
Confidence 125899999988633322 244457889999999999999888 99999999999999999999988876655 5
Q ss_pred HHHHHhhcCC------------------CCCCCC--------------------CCC---HHHHHHHHHhhhhCCCCccc
Q 022401 233 TIQRILSVQY------------------SVPDTN--------------------PIS---QECRDLISRIFVADPAAVSI 271 (298)
Q Consensus 233 ~~~~~~~~~~------------------~~~~~~--------------------~~~---~~l~~li~~~l~~dp~~Rps 271 (298)
+++++++.-+ +++... ..+ ..|.+|++.||..||.+|+|
T Consensus 320 MMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiT 399 (415)
T KOG0671|consen 320 MMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRIT 399 (415)
T ss_pred HHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCcccccc
Confidence 5555544211 111100 001 35999999999999999999
Q ss_pred ccccchhhhHHHhhhhhhhhhhh
Q 022401 272 FFFPLNMSCLLLFSFVWMFDATE 294 (298)
Q Consensus 272 ~~~~l~~~~~~~~~hp~~~~~~~ 294 (298)
+.|+ ++|||+...++
T Consensus 400 l~EA--------L~HpFF~~~~~ 414 (415)
T KOG0671|consen 400 LREA--------LSHPFFARLTP 414 (415)
T ss_pred HHHH--------hcCHHhhcCCC
Confidence 9555 58999875543
No 364
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=4.9e-39 Score=260.76 Aligned_cols=281 Identities=25% Similarity=0.348 Sum_probs=213.1
Q ss_pred cCCCCCccCCCCcCCCCCCCCCeeEEeeeccCCeEEEEEEEEccCCc----EEEEEEeecCC---cchHHHHHHHHHHhc
Q 022401 3 MDRASLTVGPAMDMPIMHDSDRYDFVRDIGSGNFGVARLMRDKVTKE----LVAVKYIERGD---KIDENVQREIINHRS 75 (298)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~----~~aiK~~~~~~---~~~~~~~~e~~~l~~ 75 (298)
+.+.+...+.....+..-+...|++++.||+|.+|.||+|....++. .+|||.++-+. ......-+|+.+++.
T Consensus 4 ~~~~~~~~~~~ser~rve~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~RE 83 (438)
T KOG0666|consen 4 SMDYDFKSKLASERERVEDLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRE 83 (438)
T ss_pred cccccchhhhhhhhhhHHHHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHH
Confidence 34555555666666666778899999999999999999997654432 68999887542 334667899999999
Q ss_pred CCCCCeeeeeEEEEe-CCeEEEEEeccCCCCHHHHHH-----hCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCc
Q 022401 76 LRHPNIVRFKEVILT-PTHLAIVMEYASGGELFERIC-----NAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLEN 149 (298)
Q Consensus 76 l~h~~i~~~~~~~~~-~~~~~lv~~~~~~~sL~~~l~-----~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~n 149 (298)
++|||++.+..++.. +..++++++|.+. +|...+. ....++...++.|+.||+.|+.|||++=++||||||.|
T Consensus 84 l~h~nvi~Lv~Vfl~~d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaN 162 (438)
T KOG0666|consen 84 LKHPNVISLVKVFLSHDKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPAN 162 (438)
T ss_pred hcCCcchhHHHHHhccCceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcce
Confidence 999999999999987 7899999999977 6766663 22358999999999999999999999999999999999
Q ss_pred eEeeCCCC--CCEEEeecCccccccCCCCC----CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCC
Q 022401 150 TLLDGSPA--PRLKICDFGYSKSSVLHSQP----KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFED 223 (298)
Q Consensus 150 ilv~~~~~--~~~~l~d~~~~~~~~~~~~~----~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~ 223 (298)
|++..++. +++||+|+|+++........ .....+..|.|||.+.+...++++.|+|++||++.||++..+.|..
T Consensus 163 IlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g 242 (438)
T KOG0666|consen 163 ILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKG 242 (438)
T ss_pred EEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccc
Confidence 99976632 35999999999855443322 2334577899999999999889999999999999999998887765
Q ss_pred CCCchhH-----HHHHHHHh---hcC--CCCCCCC------------------------------CCCHHHHHHHHHhhh
Q 022401 224 PDEPKDF-----RKTIQRIL---SVQ--YSVPDTN------------------------------PISQECRDLISRIFV 263 (298)
Q Consensus 224 ~~~~~~~-----~~~~~~~~---~~~--~~~~~~~------------------------------~~~~~l~~li~~~l~ 263 (298)
.++.... ...+.+|. +.+ .++|... .-++...+|+..||+
T Consensus 243 ~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~ 322 (438)
T KOG0666|consen 243 REEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLT 322 (438)
T ss_pred hhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhc
Confidence 4321100 11222221 111 0111111 123558899999999
Q ss_pred hCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 264 ADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 264 ~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
.||.+|+|+ .+.++|+|+.++
T Consensus 323 yDP~kRIta--------~qAleh~yF~~d 343 (438)
T KOG0666|consen 323 YDPIKRITA--------EQALEHPYFTED 343 (438)
T ss_pred cCchhhccH--------HHHhcccccccC
Confidence 999999988 555688888765
No 365
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-38 Score=280.01 Aligned_cols=250 Identities=30% Similarity=0.417 Sum_probs=201.7
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC--CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeC------C
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG--DKIDENVQREIINHRSLRHPNIVRFKEVILTP------T 92 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~ 92 (298)
.+.-|...+.||+|+||.||.++++.+|+.+|||.+... .+..+..-+|++++++++|+|||+..++-+.. .
T Consensus 11 ~~y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~ 90 (732)
T KOG4250|consen 11 ENYLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTR 90 (732)
T ss_pred CCcceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccc
Confidence 346788999999999999999999999999999998764 34456677999999999999999999885543 3
Q ss_pred eEEEEEeccCCCCHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEee--CCCCCCEEEeecCc
Q 022401 93 HLAIVMEYASGGELFERICN---AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLD--GSPAPRLKICDFGY 167 (298)
Q Consensus 93 ~~~lv~~~~~~~sL~~~l~~---~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~--~~~~~~~~l~d~~~ 167 (298)
...++||||.||+|...+.. ...+++.+++.++.++..||.|||++||+||||||.||++- .+|..-.||+|||.
T Consensus 91 ~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 91 LPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred cceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 45899999999999999953 34699999999999999999999999999999999999884 33444589999999
Q ss_pred cccccCCCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcC------
Q 022401 168 SKSSVLHSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQ------ 241 (298)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~------ 241 (298)
|+....+..-.+..||..|.+||.....++++..+|.||+||++|+++||..||..........+....+...+
T Consensus 171 Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i 250 (732)
T KOG4250|consen 171 ARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAI 250 (732)
T ss_pred cccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeE
Confidence 99888888778888999999999988655555559999999999999999999987666544333333332211
Q ss_pred -------------CCCCCCCCCCH----HHHHHHHHhhhhCCCCcc
Q 022401 242 -------------YSVPDTNPISQ----ECRDLISRIFVADPAAVS 270 (298)
Q Consensus 242 -------------~~~~~~~~~~~----~l~~li~~~l~~dp~~Rp 270 (298)
..+|.+...+. -+...+-.+|..||++|=
T Consensus 251 ~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~ 296 (732)
T KOG4250|consen 251 GAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRG 296 (732)
T ss_pred eeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence 12333333333 355667778889999886
No 366
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-37 Score=261.42 Aligned_cols=262 Identities=30% Similarity=0.467 Sum_probs=221.3
Q ss_pred CCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcch----HHHHHHHHHHhcC-CCCCeeeeeEEEEeCCe
Q 022401 19 MHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKID----ENVQREIINHRSL-RHPNIVRFKEVILTPTH 93 (298)
Q Consensus 19 ~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~----~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~ 93 (298)
++-..+|.++.+||.|+||.|-++.++.+...||||++.++.-.. +--..|..+|.-. +.|.+++++.+|..-..
T Consensus 345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDR 424 (683)
T KOG0696|consen 345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDR 424 (683)
T ss_pred ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhh
Confidence 556678999999999999999999999999999999987653221 1123455566544 46889999999998999
Q ss_pred EEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccC
Q 022401 94 LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 173 (298)
Q Consensus 94 ~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~ 173 (298)
+|+||||+.||+|-..+.+-+.+.+..+..++..|+.||-+||++||++||||.+||+++.+|+ +||.|||++.....
T Consensus 425 LyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGH--iKi~DFGmcKEni~ 502 (683)
T KOG0696|consen 425 LYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGH--IKIADFGMCKENIF 502 (683)
T ss_pred eeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCc--eEeeeccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999998 99999999974443
Q ss_pred C-CCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCH
Q 022401 174 H-SQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQ 252 (298)
Q Consensus 174 ~-~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (298)
. ....+..|+|.|+|||++...+|... .|.||+|+++|||+.|+.||.+.++.+ +.+.+......+|.. ++.
T Consensus 503 ~~~TTkTFCGTPdYiAPEIi~YqPYgks-vDWWa~GVLLyEmlaGQpPFdGeDE~e----lF~aI~ehnvsyPKs--lSk 575 (683)
T KOG0696|consen 503 DGVTTKTFCGTPDYIAPEIIAYQPYGKS-VDWWAFGVLLYEMLAGQPPFDGEDEDE----LFQAIMEHNVSYPKS--LSK 575 (683)
T ss_pred CCcceeeecCCCcccccceEEecccccc-hhHHHHHHHHHHHHcCCCCCCCCCHHH----HHHHHHHccCcCccc--ccH
Confidence 3 44467789999999999988888665 999999999999999999999988744 445555666665555 799
Q ss_pred HHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 253 ECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 253 ~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
+..++....|.+.|.+|...----+ .++-+|||+...
T Consensus 576 EAv~ickg~ltK~P~kRLGcg~~ge---~di~~H~FFR~i 612 (683)
T KOG0696|consen 576 EAVAICKGLLTKHPGKRLGCGPEGE---RDIREHPFFRRI 612 (683)
T ss_pred HHHHHHHHHhhcCCccccCCCCccc---cchhhCcchhhc
Confidence 9999999999999999987644443 567789998754
No 367
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-37 Score=234.99 Aligned_cols=259 Identities=26% Similarity=0.450 Sum_probs=210.1
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc---chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEe
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK---IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVME 99 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~ 99 (298)
.+|.-.++||+|.+|+||+++++.+++.||+|.+..+.. .-....+|+-+++.++|.||+++++..-.++.+.+|+|
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe 81 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHH
Confidence 467788999999999999999999999999999886533 34678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHH-HhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC-CC
Q 022401 100 YASGGELFERI-CNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-QP 177 (298)
Q Consensus 100 ~~~~~sL~~~l-~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~-~~ 177 (298)
+|+. .|..+. +-++.++...+..++.|+++|+.+.|+.++.|+|+||.|.+++.+|. +||.|||+++...... -.
T Consensus 82 ~cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~nge--lkladfglarafgipvrcy 158 (292)
T KOG0662|consen 82 FCDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGE--LKLADFGLARAFGIPVRCY 158 (292)
T ss_pred HhhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCc--EEecccchhhhcCCceEee
Confidence 9954 666665 34677999999999999999999999999999999999999999998 9999999998544332 33
Q ss_pred CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCC-CCCCCC-------
Q 022401 178 KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQY-SVPDTN------- 248 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~------- 248 (298)
+....+..|.+|.++.+.+.+....|+||-||++.|+.. |.+.|.+.+..+++....+-+..... .+|...
T Consensus 159 saevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~ 238 (292)
T KOG0662|consen 159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKP 238 (292)
T ss_pred eceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcc
Confidence 455678899999999998876666999999999999997 55667776666665554444322111 111111
Q ss_pred ---------------CCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 249 ---------------PISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 249 ---------------~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
+++..-++++..+|.-+|.+|+++ ...++|||+.+-
T Consensus 239 yp~ypattswsqivp~lns~grdllqkll~cnp~qrisa--------eaalqhpyf~d~ 289 (292)
T KOG0662|consen 239 YPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISA--------EAALQHPYFSDF 289 (292)
T ss_pred cCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCH--------HHHhcCcccccc
Confidence 234567899999999999999987 556689998763
No 368
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-38 Score=282.46 Aligned_cols=257 Identities=23% Similarity=0.351 Sum_probs=218.7
Q ss_pred CCCCCCCCeeEEeeeccCCeEEEEEEEEccCC---cEEEEEEeecC--CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeC
Q 022401 17 PIMHDSDRYDFVRDIGSGNFGVARLMRDKVTK---ELVAVKYIERG--DKIDENVQREIINHRSLRHPNIVRFKEVILTP 91 (298)
Q Consensus 17 ~~~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~---~~~aiK~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 91 (298)
.-.++.+...|.++||.|.||.|+.++-+..| ..||||.++.. .+...+|..|..|+-+++||||+++.|+....
T Consensus 623 akEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks 702 (996)
T KOG0196|consen 623 AKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKS 702 (996)
T ss_pred hhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecC
Confidence 34566778999999999999999999987544 47999998865 44456799999999999999999999999999
Q ss_pred CeEEEEEeccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCcccc
Q 022401 92 THLAIVMEYASGGELFERICNA-GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKS 170 (298)
Q Consensus 92 ~~~~lv~~~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~ 170 (298)
+.+.+|.|||++|+|..+|.++ ++++.-++..+++.|+.|++||.+.|+|||||-..||||+++-- ||++|||+++.
T Consensus 703 ~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLv--CKVsDFGLSRv 780 (996)
T KOG0196|consen 703 KPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLV--CKVSDFGLSRV 780 (996)
T ss_pred ceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceE--EEeccccceee
Confidence 9999999999999999999755 47999999999999999999999999999999999999998776 99999999984
Q ss_pred ccCCCCC----CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCC
Q 022401 171 SVLHSQP----KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVP 245 (298)
Q Consensus 171 ~~~~~~~----~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 245 (298)
....... .-..-..+|+|||.+...++++. +||||+|+++||.++ |..||+.-.+ .+.++. ++..+++|
T Consensus 781 ledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsA-SDVWSyGIVmWEVmSyGERPYWdmSN----QdVIka-Ie~gyRLP 854 (996)
T KOG0196|consen 781 LEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSA-SDVWSYGIVMWEVMSYGERPYWDMSN----QDVIKA-IEQGYRLP 854 (996)
T ss_pred cccCCCccccccCCccceeecChhHhhhcccCch-hhccccceEEEEecccCCCcccccch----HHHHHH-HHhccCCC
Confidence 4333311 11113478999999999999777 999999999999876 8999998665 344433 35677889
Q ss_pred CCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhH
Q 022401 246 DTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCL 281 (298)
Q Consensus 246 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~ 281 (298)
.+.++|..|.+|+.+||++|-.+||.+.||+.+.-.
T Consensus 855 pPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDk 890 (996)
T KOG0196|consen 855 PPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDK 890 (996)
T ss_pred CCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHH
Confidence 999999999999999999999999999999975533
No 369
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-39 Score=301.59 Aligned_cols=255 Identities=29% Similarity=0.420 Sum_probs=213.0
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC---CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEe
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG---DKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVME 99 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~ 99 (298)
-+|+-+..||.|.||.||.|.+..+|...|+|-+... .+..+.+.+|..++..+.|||+++.+|+-.+.+.+++.||
T Consensus 1235 ~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFME 1314 (1509)
T KOG4645|consen 1235 FRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFME 1314 (1509)
T ss_pred eeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHH
Confidence 4789999999999999999999999999999976543 3445667899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC----
Q 022401 100 YASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS---- 175 (298)
Q Consensus 100 ~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~---- 175 (298)
||.+|+|.+++..+.-.++.-...+-.|++.|+.|||+.|||||||||+||+++.+|. +|++|||.|.......
T Consensus 1315 yC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~--iK~~DFGsa~ki~~~~~~~~ 1392 (1509)
T KOG4645|consen 1315 YCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGL--IKYGDFGSAVKIKNNAQTMP 1392 (1509)
T ss_pred HhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCc--EEeecccceeEecCchhcCC
Confidence 9999999999988888888888889999999999999999999999999999999997 9999999987554443
Q ss_pred -CCCCCCCCCcccCcccccccc--CCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcC-CCCCCCCCCC
Q 022401 176 -QPKSTVGTPAYIAPEVLLRHE--YDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQ-YSVPDTNPIS 251 (298)
Q Consensus 176 -~~~~~~~~~~~~aPE~~~~~~--~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 251 (298)
......|++.|||||.+.+.+ ....++|||||||++.||+||..||...+..- ..+-++..+. +..|.. ++
T Consensus 1393 ~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~---aIMy~V~~gh~Pq~P~~--ls 1467 (1509)
T KOG4645|consen 1393 GELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEW---AIMYHVAAGHKPQIPER--LS 1467 (1509)
T ss_pred HHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchh---HHHhHHhccCCCCCchh--hh
Confidence 223456999999999988654 23445999999999999999999998876432 2233333333 334444 89
Q ss_pred HHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 252 QECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 252 ~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
++-.+||.+||..||..|-++ .++++|-|..+.
T Consensus 1468 ~~g~dFle~Cl~~dP~~Rw~~--------~qlle~~f~~~~ 1500 (1509)
T KOG4645|consen 1468 SEGRDFLEHCLEQDPKMRWTA--------SQLLEHAFGKSC 1500 (1509)
T ss_pred HhHHHHHHHHHhcCchhhhHH--------HHHHHhhccccc
Confidence 999999999999999999665 366677776543
No 370
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-38 Score=276.35 Aligned_cols=260 Identities=23% Similarity=0.357 Sum_probs=218.6
Q ss_pred CCCCcCCCCCCCCCeeEEeeeccCCeEEEEEEEEcc-CC--cEEEEEEeecCCcc--hHHHHHHHHHHhcCCCCCeeeee
Q 022401 11 GPAMDMPIMHDSDRYDFVRDIGSGNFGVARLMRDKV-TK--ELVAVKYIERGDKI--DENVQREIINHRSLRHPNIVRFK 85 (298)
Q Consensus 11 ~~~~~~~~~~~~~~y~~~~~lg~g~~~~vy~~~~~~-~~--~~~aiK~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~ 85 (298)
+|+....-.+-.++..+.+.||+|+||+|+.+.+.. +| -.||||++..+... ..+|.+|+.++.+|+|+|+++++
T Consensus 98 ~p~~~lkclIpee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLy 177 (1039)
T KOG0199|consen 98 NPSIDLKCLIPEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLY 177 (1039)
T ss_pred CcCCCcceeccHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEe
Confidence 777777778888999999999999999999999863 23 35899998876443 57899999999999999999999
Q ss_pred EEEEeCCeEEEEEeccCCCCHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEe
Q 022401 86 EVILTPTHLAIVMEYASGGELFERICN--AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKIC 163 (298)
Q Consensus 86 ~~~~~~~~~~lv~~~~~~~sL~~~l~~--~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~ 163 (298)
|+..+ ....+|+|.+..|||.+.|.. .+.+-...+..++.||+.|+.||.++++|||||-..|+++-.... +||+
T Consensus 178 GvVl~-qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprt--VKI~ 254 (1039)
T KOG0199|consen 178 GVVLD-QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRT--VKIC 254 (1039)
T ss_pred eeecc-chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccce--eeee
Confidence 99987 778899999999999999976 345888999999999999999999999999999999999987655 9999
Q ss_pred ecCccccccCCCCC----CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHh
Q 022401 164 DFGYSKSSVLHSQP----KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRIL 238 (298)
Q Consensus 164 d~~~~~~~~~~~~~----~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~ 238 (298)
|||+.+........ ........|+|||.+...+++.. +|+|++|+++|||++ |..||.+...... ++++-
T Consensus 255 DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFSha-SDvWmyGVTiWEMFtyGEePW~G~~g~qI----L~~iD 329 (1039)
T KOG0199|consen 255 DFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHA-SDVWMYGVTIWEMFTYGEEPWVGCRGIQI----LKNID 329 (1039)
T ss_pred cccceeccCCCCcceEecCCCcCcccccCHhHhcccccccc-chhhhhhhhHHhhhccCCCCCCCCCHHHH----HHhcc
Confidence 99998744433332 22234456999999999999887 999999999999998 6789998876433 33333
Q ss_pred hcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhh
Q 022401 239 SVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMS 279 (298)
Q Consensus 239 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~ 279 (298)
...+++.+..+++++.+++..||+.+|++||||.+|.+..
T Consensus 330 -~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 330 -AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred -ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 5556777777999999999999999999999998886533
No 371
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-37 Score=269.84 Aligned_cols=252 Identities=21% Similarity=0.289 Sum_probs=220.2
Q ss_pred CCCCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEE
Q 022401 17 PIMHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAI 96 (298)
Q Consensus 17 ~~~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 96 (298)
.+..+..+.....+||.|-+|.||.+.++.-.-.||||.++.+.-..++|.+|..+++.++|||+++++|+|..+-.+|+
T Consensus 261 kWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYI 340 (1157)
T KOG4278|consen 261 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYI 340 (1157)
T ss_pred hhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEE
Confidence 45556677888899999999999999998888889999998877777899999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccC-
Q 022401 97 VMEYASGGELFERICNAG--RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL- 173 (298)
Q Consensus 97 v~~~~~~~sL~~~l~~~~--~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~- 173 (298)
|+|||..|+|.+++.+.. .++.--+++++-||..|+.||..++++||||-..|.||..+-. +|+.|||+++....
T Consensus 341 iTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhi--VKvADFGLsRlMtgD 418 (1157)
T KOG4278|consen 341 ITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHI--VKVADFGLSRLMTGD 418 (1157)
T ss_pred EEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccce--EEeeccchhhhhcCC
Confidence 999999999999997543 4777788999999999999999999999999999999987776 99999999984432
Q ss_pred -CCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCC
Q 022401 174 -HSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPIS 251 (298)
Q Consensus 174 -~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (298)
+...........|+|||.+..+.++.+ +|||+||+++||+.| |..||.+.+ ...+..+++..++...+..+|
T Consensus 419 TYTAHAGAKFPIKWTAPEsLAyNtFSiK-SDVWAFGVLLWEIATYGMsPYPGid-----lSqVY~LLEkgyRM~~PeGCP 492 (1157)
T KOG4278|consen 419 TYTAHAGAKFPIKWTAPESLAYNTFSIK-SDVWAFGVLLWEIATYGMSPYPGID-----LSQVYGLLEKGYRMDGPEGCP 492 (1157)
T ss_pred ceecccCccCcccccCcccccccccccc-hhhHHHHHHHHHHHhcCCCCCCCcc-----HHHHHHHHhccccccCCCCCC
Confidence 233333445678999999999999888 999999999999998 777888765 445666777888888888899
Q ss_pred HHHHHHHHHhhhhCCCCcccccccc
Q 022401 252 QECRDLISRIFVADPAAVSIFFFPL 276 (298)
Q Consensus 252 ~~l~~li~~~l~~dp~~Rps~~~~l 276 (298)
+.+.+|+++||+++|.+||+++++-
T Consensus 493 pkVYeLMraCW~WsPsDRPsFaeiH 517 (1157)
T KOG4278|consen 493 PKVYELMRACWNWSPSDRPSFAEIH 517 (1157)
T ss_pred HHHHHHHHHHhcCCcccCccHHHHH
Confidence 9999999999999999999998765
No 372
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=5e-37 Score=268.94 Aligned_cols=248 Identities=22% Similarity=0.306 Sum_probs=206.6
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEcc----CCcEEEEEEeecC--CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEE
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDKV----TKELVAVKYIERG--DKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLA 95 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~~----~~~~~aiK~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 95 (298)
.+...+.+.||.|-||.||.+.... ..--||||..+.+ ....+.|..|..+++.++||||++++|+| .+...+
T Consensus 388 Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~-~e~P~W 466 (974)
T KOG4257|consen 388 RELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVC-VEQPMW 466 (974)
T ss_pred hhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeee-ecccee
Confidence 3445566789999999999998742 2335889988763 44467899999999999999999999998 456889
Q ss_pred EEEeccCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC
Q 022401 96 IVMEYASGGELFERICNAG-RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH 174 (298)
Q Consensus 96 lv~~~~~~~sL~~~l~~~~-~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~ 174 (298)
+|||.++.|-|+.++..+. .++..++..++.||+.+|.|||+.++|||||-..||+|.+..- +||+|||+++-....
T Consensus 467 ivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~C--VKLaDFGLSR~~ed~ 544 (974)
T KOG4257|consen 467 IVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQC--VKLADFGLSRYLEDD 544 (974)
T ss_pred EEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcce--eeecccchhhhcccc
Confidence 9999999999999997654 6899999999999999999999999999999999999998876 999999999744332
Q ss_pred --CCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCC
Q 022401 175 --SQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPIS 251 (298)
Q Consensus 175 --~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (298)
.......-...|||||.+.-..+++. +|||.||+++||++. |..||.+....+.+- .++..-++|.+.++|
T Consensus 545 ~yYkaS~~kLPIKWmaPESINfRrFTtA-SDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~-----~iEnGeRlP~P~nCP 618 (974)
T KOG4257|consen 545 AYYKASRGKLPIKWMAPESINFRRFTTA-SDVWMFGVCMWEILSLGVKPFQGVKNSDVIG-----HIENGERLPCPPNCP 618 (974)
T ss_pred chhhccccccceeecCccccchhcccch-hhHHHHHHHHHHHHHhcCCccccccccceEE-----EecCCCCCCCCCCCC
Confidence 33334445678999999988888776 999999999999886 889999876644321 123445778888899
Q ss_pred HHHHHHHHHhhhhCCCCcccccccchh
Q 022401 252 QECRDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 252 ~~l~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
+.+..+.++||.++|.+||.+.++...
T Consensus 619 p~LYslmskcWayeP~kRPrftei~~~ 645 (974)
T KOG4257|consen 619 PALYSLMSKCWAYEPSKRPRFTEIKAI 645 (974)
T ss_pred hHHHHHHHHHhccCcccCCcHHHHHHH
Confidence 999999999999999999999888763
No 373
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.2e-39 Score=253.37 Aligned_cols=262 Identities=26% Similarity=0.367 Sum_probs=208.8
Q ss_pred CCcCCCCCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc---chHHHHHHHHHHhcCCCCCeeeeeEEEE
Q 022401 13 AMDMPIMHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK---IDENVQREIINHRSLRHPNIVRFKEVIL 89 (298)
Q Consensus 13 ~~~~~~~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 89 (298)
++..|.+.+.++|+-..++|+|.||.||+|+.+.+|+.|++|++..+++ .-....+|+.+|..++|+|++.++++|.
T Consensus 7 s~~~P~~~~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~ 86 (376)
T KOG0669|consen 7 SMYEPFCDEVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICR 86 (376)
T ss_pred cccCCceecchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHh
Confidence 5678999999999999999999999999999999999999987644222 2245678999999999999999999885
Q ss_pred e--------CCeEEEEEeccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCE
Q 022401 90 T--------PTHLAIVMEYASGGELFERICNA-GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRL 160 (298)
Q Consensus 90 ~--------~~~~~lv~~~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~ 160 (298)
. ...+|+||++|.. +|..++++. ..++..++..+++++..||.|+|...|+|||+|++|++++.+|. +
T Consensus 87 tk~Tp~~r~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgi--l 163 (376)
T KOG0669|consen 87 TKATPTNRDRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGI--L 163 (376)
T ss_pred hccCCcccccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCce--E
Confidence 3 2458999999966 788888766 57999999999999999999999999999999999999999988 9
Q ss_pred EEeecCccccccCCCCCCCC-----CCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHH
Q 022401 161 KICDFGYSKSSVLHSQPKST-----VGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQ 235 (298)
Q Consensus 161 ~l~d~~~~~~~~~~~~~~~~-----~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~ 235 (298)
+|.|||+++..+........ ..+..|.+||.+.+...+++..|||.-||++.+|+++..-+++..+... ...+.
T Consensus 164 klADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqq-l~~Is 242 (376)
T KOG0669|consen 164 KLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQ-LHLIS 242 (376)
T ss_pred EeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHH-HHHHH
Confidence 99999999755544333222 2477899999999988777779999999999999999988877655333 23333
Q ss_pred HHhhcCC--CCCCCC----------------------------CCCHHHHHHHHHhhhhCCCCcccccccchh
Q 022401 236 RILSVQY--SVPDTN----------------------------PISQECRDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 236 ~~~~~~~--~~~~~~----------------------------~~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
.+++.-. .+|.-. .-+++..+++..+|..||.+|+++.+++++
T Consensus 243 ~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 243 QLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred HHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 3332110 011111 123688999999999999999988666543
No 374
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-37 Score=268.23 Aligned_cols=251 Identities=24% Similarity=0.355 Sum_probs=208.1
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcc--hHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEe
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKI--DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVME 99 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~ 99 (298)
.+...++++||+|.||.|-++.... +.+||+|....+... ..+|.+|+.+|.+++||||+.+.++|..++.+++++|
T Consensus 537 Rs~L~~~ekiGeGqFGEVhLCeveg-~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~E 615 (807)
T KOG1094|consen 537 RSRLRFKEKIGEGQFGEVHLCEVEG-PLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITE 615 (807)
T ss_pred hhheehhhhhcCcccceeEEEEecC-ceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHH
Confidence 3678899999999999999998863 689999998865443 3579999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC--
Q 022401 100 YASGGELFERICNA--GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-- 175 (298)
Q Consensus 100 ~~~~~sL~~~l~~~--~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~-- 175 (298)
|+..|.|.+++... +.........|+.||+.|++||.+.++|||||.+.|+|++.+.+ +|++|||+++......
T Consensus 616 YmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~--iKiadfgmsR~lysg~yy 693 (807)
T KOG1094|consen 616 YMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFT--IKIADFGMSRNLYSGDYY 693 (807)
T ss_pred HHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCccc--EEecCcccccccccCCce
Confidence 99999999999766 33456677889999999999999999999999999999998887 9999999998443322
Q ss_pred -CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh--CCCCCCCCCCchhHHHHHHHHhhc---CCCCCCCCC
Q 022401 176 -QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV--GGYPFEDPDEPKDFRKTIQRILSV---QYSVPDTNP 249 (298)
Q Consensus 176 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~--g~~pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 249 (298)
.........+|||+|.+..++++++ +|+|+||+++||+++ ...||....+++.... ...+... ...++.+..
T Consensus 694 ~vqgr~vlpiRwmawEsillgkFtta-SDvWafgvTlwE~~~~C~e~Py~~lt~e~vven-~~~~~~~~~~~~~l~~P~~ 771 (807)
T KOG1094|consen 694 RVQGRAVLPIRWMAWESILLGKFTTA-SDVWAFGVTLWEVFMLCREQPYSQLTDEQVVEN-AGEFFRDQGRQVVLSRPPA 771 (807)
T ss_pred eeecceeeeeeehhHHHHHhccccch-hhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHh-hhhhcCCCCcceeccCCCc
Confidence 2233445689999999999999887 999999999999874 7789988776443332 2222222 223556667
Q ss_pred CCHHHHHHHHHhhhhCCCCcccccccch
Q 022401 250 ISQECRDLISRIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 250 ~~~~l~~li~~~l~~dp~~Rps~~~~l~ 277 (298)
+|.++.+++.+||..+..+||+++++-.
T Consensus 772 cp~~lyelml~Cw~~es~~RPsFe~lh~ 799 (807)
T KOG1094|consen 772 CPQGLYELMLRCWRRESEQRPSFEQLHL 799 (807)
T ss_pred CcHHHHHHHHHHhchhhhcCCCHHHHHH
Confidence 8999999999999999999999977653
No 375
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=8.1e-36 Score=247.44 Aligned_cols=241 Identities=40% Similarity=0.627 Sum_probs=199.4
Q ss_pred CeEEEEEEEEccCCcEEEEEEeecCCcc--hHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEeccCCCCHHHHHHh
Q 022401 35 NFGVARLMRDKVTKELVAVKYIERGDKI--DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICN 112 (298)
Q Consensus 35 ~~~~vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~~~sL~~~l~~ 112 (298)
++|.||.+....++..+++|++...... .+.+.+|+..+++++|+|++++.+++......++++|++.+++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 5789999999988999999998765433 47888999999999999999999999999999999999999999999977
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCCCCCCCCCcccCcccc
Q 022401 113 AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL 192 (298)
Q Consensus 113 ~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~ 192 (298)
...++...++.++.+++.++.+||+.+++|+||+|.||+++.++. ++++|||.+.............+...|++||..
T Consensus 81 ~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~--~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~ 158 (244)
T smart00220 81 RGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGH--VKLADFGLARQLDPGGLLTTFVGTPEYMAPEVL 158 (244)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCc--EEEccccceeeeccccccccccCCcCCCCHHHH
Confidence 766899999999999999999999999999999999999998876 999999998765554444556678889999998
Q ss_pred ccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCC-CCHHHHHHHHHhhhhCCCCccc
Q 022401 193 LRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNP-ISQECRDLISRIFVADPAAVSI 271 (298)
Q Consensus 193 ~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~~l~~dp~~Rps 271 (298)
.....+.+ +|+|++|++++++++|..||........ ................. ++.++.+++.+||..||++||+
T Consensus 159 ~~~~~~~~-~Di~slG~~l~~l~~~~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~ 234 (244)
T smart00220 159 LGKGYGKA-VDVWSLGVILYELLTGKPPFPGDDQLLE---LFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLT 234 (244)
T ss_pred ccCCCCch-hhHHHHHHHHHHHHhCCCCCCCCCcHHH---HHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccC
Confidence 77777664 9999999999999999999977433322 22222223322222222 7899999999999999999998
Q ss_pred ccccchhhhHHHhhhhhh
Q 022401 272 FFFPLNMSCLLLFSFVWM 289 (298)
Q Consensus 272 ~~~~l~~~~~~~~~hp~~ 289 (298)
+.+++ +|||+
T Consensus 235 ~~~~~--------~~~~~ 244 (244)
T smart00220 235 AEEAL--------QHPFF 244 (244)
T ss_pred HHHHh--------hCCCC
Confidence 85544 67774
No 376
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-38 Score=269.34 Aligned_cols=263 Identities=27% Similarity=0.422 Sum_probs=227.4
Q ss_pred CCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC----CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeE
Q 022401 19 MHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG----DKIDENVQREIINHRSLRHPNIVRFKEVILTPTHL 94 (298)
Q Consensus 19 ~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 94 (298)
....++.+++..||-||||.|=+++.+.....+|+|++.+. .+..+.+..|-+++...+.|.|++++-.|.+++.+
T Consensus 416 ~v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyv 495 (732)
T KOG0614|consen 416 QVKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYV 495 (732)
T ss_pred ccchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhh
Confidence 34457889999999999999999988766666899988763 34446677899999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC
Q 022401 95 AIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH 174 (298)
Q Consensus 95 ~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~ 174 (298)
|++||.|-||.+...+...+.+++.+...++..++.|++|||++||++|||||+|.+++.+|. +||.|||++......
T Consensus 496 YmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy--~KLVDFGFAKki~~g 573 (732)
T KOG0614|consen 496 YMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGY--LKLVDFGFAKKIGSG 573 (732)
T ss_pred hhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCc--eEEeehhhHHHhccC
Confidence 999999999999999999999999999999999999999999999999999999999999999 999999999988888
Q ss_pred CCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHH
Q 022401 175 SQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQEC 254 (298)
Q Consensus 175 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (298)
....+.+|+|.|.|||++.+++.+.. +|.|+||+++||+++|.+||.+.+.-.......+.+ -.+..+..++...
T Consensus 574 ~KTwTFcGTpEYVAPEIILnKGHD~a-vDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGi----d~i~~Pr~I~k~a 648 (732)
T KOG0614|consen 574 RKTWTFCGTPEYVAPEIILNKGHDRA-VDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGI----DKIEFPRRITKTA 648 (732)
T ss_pred CceeeecCCcccccchhhhccCcchh-hHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhh----hhhhcccccchhH
Confidence 89999999999999999999998777 999999999999999999999987644444433333 2333345578899
Q ss_pred HHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 255 RDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 255 ~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
.++|++++..+|.+|... +..-+.++--|-|+.+
T Consensus 649 ~~Lik~LCr~~P~ERLG~---~~~gI~DIkkH~Wf~g 682 (732)
T KOG0614|consen 649 TDLIKKLCRDNPTERLGY---QKGGINDIKKHRWFEG 682 (732)
T ss_pred HHHHHHHHhcCcHhhhcc---ccCChHHHHhhhhhhc
Confidence 999999999999999974 2223456667777753
No 377
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.7e-37 Score=286.84 Aligned_cols=251 Identities=31% Similarity=0.445 Sum_probs=193.1
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC--CcchHHHHHHHHHHhcCCCCCeeeeeEEEEe----------
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG--DKIDENVQREIINHRSLRHPNIVRFKEVILT---------- 90 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---------- 90 (298)
.+|+.++.||+||||.||+++++-+|+.||||++... ......+.+|+..+.+|+|||+++.+..+..
T Consensus 479 ~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei 558 (1351)
T KOG1035|consen 479 NDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEI 558 (1351)
T ss_pred hhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccccc
Confidence 5789999999999999999999999999999999876 4555678899999999999999865443310
Q ss_pred --------------------------------------------------------------------------------
Q 022401 91 -------------------------------------------------------------------------------- 90 (298)
Q Consensus 91 -------------------------------------------------------------------------------- 90 (298)
T Consensus 559 ~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~ 638 (1351)
T KOG1035|consen 559 VASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEG 638 (1351)
T ss_pred cccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCC
Confidence
Q ss_pred ---------------------C--------CeEEEEEeccCCCCHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHHhhcCc
Q 022401 91 ---------------------P--------THLAIVMEYASGGELFERICNAGRF-SEDEARFFFQQLISGVSYCHAMQV 140 (298)
Q Consensus 91 ---------------------~--------~~~~lv~~~~~~~sL~~~l~~~~~~-~~~~~~~i~~~l~~~l~~Lh~~~i 140 (298)
+ ..+|+-||||+..++.+.+..+-.. .....|+++++|+.|+.|+|+.|+
T Consensus 639 ~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~gi 718 (1351)
T KOG1035|consen 639 SVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGI 718 (1351)
T ss_pred ccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCce
Confidence 0 2368899999887777777655443 477899999999999999999999
Q ss_pred EEecCCCCceEeeCCCCCCEEEeecCcccccc-------------------CCCCCCCCCCCCcccCcccccccc---CC
Q 022401 141 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSV-------------------LHSQPKSTVGTPAYIAPEVLLRHE---YD 198 (298)
Q Consensus 141 ~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~-------------------~~~~~~~~~~~~~~~aPE~~~~~~---~~ 198 (298)
+||||||.|||++++++ |||+|||+++... .........||..|+|||.+.+.. |+
T Consensus 719 IHRDLKP~NIFLd~~~~--VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn 796 (1351)
T KOG1035|consen 719 IHRDLKPRNIFLDSRNS--VKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYN 796 (1351)
T ss_pred eeccCCcceeEEcCCCC--eeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccccccc
Confidence 99999999999998887 9999999987411 001112234788899999987665 55
Q ss_pred CCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCC--CCCCCCHHHHHHHHHhhhhCCCCcccccccc
Q 022401 199 GKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVP--DTNPISQECRDLISRIFVADPAAVSIFFFPL 276 (298)
Q Consensus 199 ~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l 276 (298)
.+ +|+||||++++||+ .||...=+ -...+..+..+....+ ....--+.-.++|++|++.||.+|||+.++|
T Consensus 797 ~K-iDmYSLGIVlFEM~---yPF~TsME---Ra~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL 869 (1351)
T KOG1035|consen 797 SK-IDMYSLGIVLFEML---YPFGTSME---RASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELL 869 (1351)
T ss_pred ch-hhhHHHHHHHHHHh---ccCCchHH---HHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHh
Confidence 55 99999999999999 56665322 2333444444443333 0111235678899999999999999998888
Q ss_pred hhhhHH
Q 022401 277 NMSCLL 282 (298)
Q Consensus 277 ~~~~~~ 282 (298)
+.-++.
T Consensus 870 ~s~llp 875 (1351)
T KOG1035|consen 870 NSELLP 875 (1351)
T ss_pred hccCCC
Confidence 765554
No 378
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1e-35 Score=269.40 Aligned_cols=255 Identities=26% Similarity=0.434 Sum_probs=220.2
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcC-CCCCeeeeeEEEEe-----CCeEEE
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSL-RHPNIVRFKEVILT-----PTHLAI 96 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~-----~~~~~l 96 (298)
+.|+|.+++|.|.+|.||+++++.+++..|+|+........+++..|.++++.+ .|||++.+++++.. ++.+++
T Consensus 19 d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWL 98 (953)
T KOG0587|consen 19 DIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWL 98 (953)
T ss_pred CccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEE
Confidence 469999999999999999999999999999999988888889999999999988 58999999999864 457999
Q ss_pred EEeccCCCCHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccc-cccC
Q 022401 97 VMEYASGGELFERICN--AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK-SSVL 173 (298)
Q Consensus 97 v~~~~~~~sL~~~l~~--~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~-~~~~ 173 (298)
|||||.+||..+++.+ +..+.+.-+..|++.++.|+.+||++.++|+|+|-.||+++.++. +||+|||++. ..+.
T Consensus 99 VMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~--VKLvDFGvSaQldsT 176 (953)
T KOG0587|consen 99 VMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAE--VKLVDFGVSAQLDST 176 (953)
T ss_pred EeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCc--EEEeeeeeeeeeecc
Confidence 9999999999999864 446888899999999999999999999999999999999999988 9999999874 4555
Q ss_pred CCCCCCCCCCCcccCccccccc-----cCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCC
Q 022401 174 HSQPKSTVGTPAYIAPEVLLRH-----EYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTN 248 (298)
Q Consensus 174 ~~~~~~~~~~~~~~aPE~~~~~-----~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (298)
.....+..|++.|||||++... .++.. +|+||||++..||.-|.+|+-... ....+.....+.++.+..+.
T Consensus 177 ~grRnT~iGtP~WMAPEViac~e~~d~tyd~R-~D~WsLGITaIEladG~PPl~DmH---PmraLF~IpRNPPPkLkrp~ 252 (953)
T KOG0587|consen 177 VGRRNTFIGTPYWMAPEVIACDESPDATYDYR-SDLWSLGITAIEMAEGAPPLCDMH---PMRALFLIPRNPPPKLKRPK 252 (953)
T ss_pred cccccCcCCCcccccceeeecccCCCCCcccc-cchhhccceeehhcCCCCCccCcc---hhhhhccCCCCCCccccchh
Confidence 5666788899999999997643 34455 999999999999999999976532 33555555556666666677
Q ss_pred CCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 249 PISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 249 ~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
.+++++.+||+.||.+|-.+||+. ..++.|||+.+
T Consensus 253 kWs~~FndFIs~cL~Kd~e~RP~~--------~~ll~hpFi~e 287 (953)
T KOG0587|consen 253 KWSKKFNDFISTCLVKDYEQRPST--------EELLKHPFITE 287 (953)
T ss_pred hHHHHHHHHHHHHHhhccccCcch--------hhhccCCcccc
Confidence 899999999999999999999976 66668999873
No 379
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-35 Score=249.34 Aligned_cols=132 Identities=27% Similarity=0.405 Sum_probs=115.8
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCC-----C---CCeeeeeEEEEeC-
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLR-----H---PNIVRFKEVILTP- 91 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~-----h---~~i~~~~~~~~~~- 91 (298)
..++|-+.++||+|-|++||+|.+..+.+.||+|+.+......+....|+.+|++++ | .+|+++++.|...
T Consensus 76 ~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 76 NGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred cCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 348999999999999999999999999999999988877666777889999999883 2 4699999999864
Q ss_pred ---CeEEEEEeccCCCCHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHh-hcCcEEecCCCCceEee
Q 022401 92 ---THLAIVMEYASGGELFERICN--AGRFSEDEARFFFQQLISGVSYCH-AMQVCHRDLKLENTLLD 153 (298)
Q Consensus 92 ---~~~~lv~~~~~~~sL~~~l~~--~~~~~~~~~~~i~~~l~~~l~~Lh-~~~i~H~dl~p~nilv~ 153 (298)
.++|+|+|+. |.+|..++.. ...++...+++|++||+.||.||| +.||+|.||||+|||+.
T Consensus 156 pNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC 222 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence 5899999999 6688888754 346899999999999999999999 57999999999999994
No 380
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.9e-35 Score=258.34 Aligned_cols=260 Identities=30% Similarity=0.436 Sum_probs=213.0
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC----cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEE
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD----KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
+-|..++.||-|+||.|.+++...+...||.|.+.+.. ......+.|-.||..-..+-+|+++..|.++..+|+||
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence 34889999999999999999999999999999887632 22344678999999999999999999999999999999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccc-----cC
Q 022401 99 EYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSS-----VL 173 (298)
Q Consensus 99 ~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~-----~~ 173 (298)
+|++||++-++|-..+-+.+.....++..+..|+++.|+.|++||||||+|||||.+|+ +||.|||+|+.. ..
T Consensus 709 dYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGH--IKLTDFGLCTGfRWTHdsk 786 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGH--IKLTDFGLCTGFRWTHDSK 786 (1034)
T ss_pred eccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCc--eeeeeccccccceeccccc
Confidence 99999999999999999999999999999999999999999999999999999999999 999999998511 00
Q ss_pred C-------CCC-------------------------------CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHH
Q 022401 174 H-------SQP-------------------------------KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVML 215 (298)
Q Consensus 174 ~-------~~~-------------------------------~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~ 215 (298)
+ .+. ....|++.|+|||++...+++-. +|.||.|++||||+
T Consensus 787 YYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~-cdwws~gvil~em~ 865 (1034)
T KOG0608|consen 787 YYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQL-CDWWSVGVILYEML 865 (1034)
T ss_pred cccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCcccc-chhhHhhHHHHHHh
Confidence 0 000 00126788999999998888777 99999999999999
Q ss_pred hCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhhh
Q 022401 216 VGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDAT 293 (298)
Q Consensus 216 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~~ 293 (298)
.|+.||......+.-.+++.+ .....++...+++.+..++|.+++ -+++.|..- +--.++-.|||+..++
T Consensus 866 ~g~~pf~~~tp~~tq~kv~nw--~~~l~~~~~~~ls~e~~~li~kLc-~sad~RLGk-----ng~d~vKaHpfFkgID 935 (1034)
T KOG0608|consen 866 VGQPPFLADTPGETQYKVINW--RNFLHIPYQGNLSKEALDLIQKLC-CSADSRLGK-----NGADQVKAHPFFKGID 935 (1034)
T ss_pred hCCCCccCCCCCcceeeeeeh--hhccccccccccCHHHHHHHHHHh-cChhhhhcc-----cchhhhhcCccccccc
Confidence 999999876543332332222 223355666778999999999976 577788754 2234688999998653
No 381
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-35 Score=240.63 Aligned_cols=270 Identities=26% Similarity=0.415 Sum_probs=223.3
Q ss_pred CCCCCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC----CcchHHHHHHHHHHhcC-CCCCeeeeeEEEEe
Q 022401 16 MPIMHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG----DKIDENVQREIINHRSL-RHPNIVRFKEVILT 90 (298)
Q Consensus 16 ~~~~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~----~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~ 90 (298)
.......++|.++++||.|++..|..++.+.+.+.||+|+++++ .+...-...|.....+- .||.++-++.+|..
T Consensus 243 ~~~~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqt 322 (593)
T KOG0695|consen 243 ISQGLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQT 322 (593)
T ss_pred cccccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcc
Confidence 44556788999999999999999999999999999999998763 33344456666666655 68999999999999
Q ss_pred CCeEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCcccc
Q 022401 91 PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKS 170 (298)
Q Consensus 91 ~~~~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~ 170 (298)
++.+++|.||.+||.|--.+.++.++++.....+...|+.||.|||++||+++|||..||+++..|+ +||.|+|++..
T Consensus 323 esrlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaegh--ikltdygmcke 400 (593)
T KOG0695|consen 323 ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGH--IKLTDYGMCKE 400 (593)
T ss_pred cceEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCc--eeecccchhhc
Confidence 9999999999999999888888889999999999999999999999999999999999999999998 99999999974
Q ss_pred c-cCCCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCC---CchhHHH-HHHHHhhcCCCCC
Q 022401 171 S-VLHSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPD---EPKDFRK-TIQRILSVQYSVP 245 (298)
Q Consensus 171 ~-~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~---~~~~~~~-~~~~~~~~~~~~~ 245 (298)
. ......++..|+|.|.|||++++..|... .|.|+||++++||+.|+.||.-.. .+..-.+ +.+-+.+.+.++|
T Consensus 401 ~l~~gd~tstfcgtpnyiapeilrgeeygfs-vdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqirip 479 (593)
T KOG0695|consen 401 GLGPGDTTSTFCGTPNYIAPEILRGEEYGFS-VDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIP 479 (593)
T ss_pred CCCCCcccccccCCCcccchhhhcccccCce-ehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhccccc
Confidence 4 33445577889999999999999998777 999999999999999999995432 1111122 3334455555555
Q ss_pred CCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 246 DTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 246 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
.. ++-....+++..|++||.+|....--. -..++-.|+|+...
T Consensus 480 rs--lsvkas~vlkgflnkdp~erlgc~~~~--g~~dik~h~ffr~i 522 (593)
T KOG0695|consen 480 RS--LSVKASHVLKGFLNKDPKERLGCRPQT--GFSDIKSHAFFRSI 522 (593)
T ss_pred ce--eehhhHHHHHHhhcCCcHHhcCCCccc--chhhhhcchhhhhC
Confidence 44 677888999999999999998763222 46788899999854
No 382
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=3.8e-35 Score=269.98 Aligned_cols=259 Identities=16% Similarity=0.176 Sum_probs=171.9
Q ss_pred CCCCCCCeeEEeeeccCCeEEEEEEEEccC----CcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCeeeeeEE------
Q 022401 18 IMHDSDRYDFVRDIGSGNFGVARLMRDKVT----KELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEV------ 87 (298)
Q Consensus 18 ~~~~~~~y~~~~~lg~g~~~~vy~~~~~~~----~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~------ 87 (298)
.....++|++.+.||+|+||.||++.+..+ +..||+|.+...... +...++ .++...+.++..+...
T Consensus 127 ~~~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~-e~~~~e--~l~~~~~~~~~~~~~~~~~~~~ 203 (566)
T PLN03225 127 PSFKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV-EIWMNE--RVRRACPNSCADFVYGFLEPVS 203 (566)
T ss_pred CCCccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh-HHHHHH--HHHhhchhhHHHHHHhhhcccc
Confidence 345678999999999999999999999888 889999987543221 111111 1111122222221111
Q ss_pred EEeCCeEEEEEeccCCCCHHHHHHhCCC--------------------CCHHHHHHHHHHHHHHHHHHhhcCcEEecCCC
Q 022401 88 ILTPTHLAIVMEYASGGELFERICNAGR--------------------FSEDEARFFFQQLISGVSYCHAMQVCHRDLKL 147 (298)
Q Consensus 88 ~~~~~~~~lv~~~~~~~sL~~~l~~~~~--------------------~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p 147 (298)
...+..+++|++|+.+++|.+++..... .....+..++.|++.||.|||++||+||||||
T Consensus 204 ~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP 283 (566)
T PLN03225 204 SKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKP 283 (566)
T ss_pred cccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCH
Confidence 2345678999999999999988864321 12334667999999999999999999999999
Q ss_pred CceEeeC-CCCCCEEEeecCccccccC--CCCCCCCCCCCcccCccccccccCC---------------------CCccc
Q 022401 148 ENTLLDG-SPAPRLKICDFGYSKSSVL--HSQPKSTVGTPAYIAPEVLLRHEYD---------------------GKIAD 203 (298)
Q Consensus 148 ~nilv~~-~~~~~~~l~d~~~~~~~~~--~~~~~~~~~~~~~~aPE~~~~~~~~---------------------~~~~D 203 (298)
+||+++. ++. +||+|||++..... ........+++.|+|||.+...... ..++|
T Consensus 284 ~NILl~~~~~~--~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D 361 (566)
T PLN03225 284 QNIIFSEGSGS--FKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD 361 (566)
T ss_pred HHEEEeCCCCc--EEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence 9999985 344 99999999864322 2223445678899999975432211 12369
Q ss_pred hHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHH----------HhhcCCC------CCCCCCCCHHHHHHHHHhhhhCCC
Q 022401 204 VWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQR----------ILSVQYS------VPDTNPISQECRDLISRIFVADPA 267 (298)
Q Consensus 204 i~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~----------~~~~~~~------~~~~~~~~~~l~~li~~~l~~dp~ 267 (298)
|||+||++|+|+++..|+.. ....+...+.. ....... .......+.+..+||.+||+.||+
T Consensus 362 VwSlGviL~el~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~ 439 (566)
T PLN03225 362 IYSAGLIFLQMAFPNLRSDS--NLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGR 439 (566)
T ss_pred cHHHHHHHHHHHhCcCCCch--HHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcc
Confidence 99999999999987766432 11111111111 0000000 000011234567999999999999
Q ss_pred CcccccccchhhhHHHhhhhhhhh
Q 022401 268 AVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 268 ~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
+|||+ .++++|||++.
T Consensus 440 kR~ta--------~e~L~Hpff~~ 455 (566)
T PLN03225 440 QRISA--------KAALAHPYFDR 455 (566)
T ss_pred cCCCH--------HHHhCCcCcCC
Confidence 99987 55557888864
No 383
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-36 Score=253.11 Aligned_cols=263 Identities=26% Similarity=0.364 Sum_probs=211.6
Q ss_pred CCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHH--------HHHHHHHHhcCCCCCeeeeeEEEE-e
Q 022401 20 HDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDEN--------VQREIINHRSLRHPNIVRFKEVIL-T 90 (298)
Q Consensus 20 ~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~--------~~~e~~~l~~l~h~~i~~~~~~~~-~ 90 (298)
+-+++|-++..||.|||+.||+|-+...+++||+|+-.....+.++ .-+|..|.+.|.||.||++++++. +
T Consensus 460 tLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslD 539 (775)
T KOG1151|consen 460 TLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLD 539 (775)
T ss_pred chHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeec
Confidence 3467899999999999999999999988999999987655444332 236899999999999999999986 5
Q ss_pred CCeEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhc--CcEEecCCCCceEeeCCC-CCCEEEeecCc
Q 022401 91 PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM--QVCHRDLKLENTLLDGSP-APRLKICDFGY 167 (298)
Q Consensus 91 ~~~~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~--~i~H~dl~p~nilv~~~~-~~~~~l~d~~~ 167 (298)
...+|-|.|||+|.+|.-++.+...+++.+...|+.||+.||.||.+. -|+|-||||.|||+.+.. .+.+||.|||+
T Consensus 540 tdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGL 619 (775)
T KOG1151|consen 540 TDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGL 619 (775)
T ss_pred cccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecch
Confidence 578999999999999999999999999999999999999999999965 599999999999985433 33599999999
Q ss_pred cccccCCCCC--------CCCCCCCcccCcccccccc---CCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHH
Q 022401 168 SKSSVLHSQP--------KSTVGTPAYIAPEVLLRHE---YDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQR 236 (298)
Q Consensus 168 ~~~~~~~~~~--------~~~~~~~~~~aPE~~~~~~---~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~ 236 (298)
+......... ....|+.+|++||.+.-.. -.+.+.||||+|+++|.++.|..||+....-..+.....-
T Consensus 620 SKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTI 699 (775)
T KOG1151|consen 620 SKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTI 699 (775)
T ss_pred hhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhch
Confidence 9754433222 3345888999999865331 2244599999999999999999999886554433333333
Q ss_pred HhhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhh
Q 022401 237 ILSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMF 290 (298)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~ 290 (298)
+......+|..+.++.+..+||++||++--++|... .++-.|||+-
T Consensus 700 lkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV--------~qLA~dpyll 745 (775)
T KOG1151|consen 700 LKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDV--------QQLACDPYLL 745 (775)
T ss_pred hcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhH--------HHHccCcccc
Confidence 344556677777799999999999999999999954 6666677664
No 384
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=7.4e-36 Score=232.91 Aligned_cols=260 Identities=21% Similarity=0.402 Sum_probs=207.4
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCC-CCCeeeeeEEEEeC--CeEEEE
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLR-HPNIVRFKEVILTP--THLAIV 97 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~--~~~~lv 97 (298)
.+++|++.+++|.|.++.||.+....++..++||+++.-. .+.+.+|+.||+.|. ||||+++.++..+. ....++
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk--kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi 113 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK--KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI 113 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH--HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence 5689999999999999999999998888999999887532 367889999999996 99999999999876 467899
Q ss_pred EeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCC
Q 022401 98 MEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP 177 (298)
Q Consensus 98 ~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~ 177 (298)
||+.+..+...+ .+.++...+..++.+++.||.|+|+.||+|||+||+|++++.... .++|+|+|++.........
T Consensus 114 FE~v~n~Dfk~l---y~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~r-kLrlIDWGLAEFYHp~~eY 189 (338)
T KOG0668|consen 114 FEYVNNTDFKQL---YPTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELR-KLRLIDWGLAEFYHPGKEY 189 (338)
T ss_pred hhhhccccHHHH---hhhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhc-eeeeeecchHhhcCCCcee
Confidence 999988665543 355788999999999999999999999999999999999985543 5999999999877777766
Q ss_pred CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCC-CCCCCchhHHHHHHHHh------------------
Q 022401 178 KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPF-EDPDEPKDFRKTIQRIL------------------ 238 (298)
Q Consensus 178 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf-~~~~~~~~~~~~~~~~~------------------ 238 (298)
.....+..|--||.+.........-|+|||||++..|+....|| .+.+..+++.+..+-+.
T Consensus 190 nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~ 269 (338)
T KOG0668|consen 190 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQ 269 (338)
T ss_pred eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChh
Confidence 77777888999999887765555499999999999999999886 45455555443322210
Q ss_pred -----hcC----C----CCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhhhh
Q 022401 239 -----SVQ----Y----SVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDATE 294 (298)
Q Consensus 239 -----~~~----~----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~~~ 294 (298)
... + ......-++++..+|+..+|-.|-.+|+|+.|++ .|||+....+
T Consensus 270 ~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam--------~HpyF~~~~~ 330 (338)
T KOG0668|consen 270 FEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAM--------AHPYFAPVRE 330 (338)
T ss_pred HhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHh--------cCchHHHHHH
Confidence 000 0 0011112569999999999999999999996666 6777765444
No 385
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=6.5e-34 Score=256.12 Aligned_cols=262 Identities=18% Similarity=0.198 Sum_probs=186.2
Q ss_pred CCCCCCeeEEeeeccCCeEEEEEEEEc----------------cCCcEEEEEEeecCCcc-hH--------------HHH
Q 022401 19 MHDSDRYDFVRDIGSGNFGVARLMRDK----------------VTKELVAVKYIERGDKI-DE--------------NVQ 67 (298)
Q Consensus 19 ~~~~~~y~~~~~lg~g~~~~vy~~~~~----------------~~~~~~aiK~~~~~~~~-~~--------------~~~ 67 (298)
....++|++.++||+|+||.||++... ..++.||||.+...... .+ ...
T Consensus 141 r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~ 220 (507)
T PLN03224 141 RWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGM 220 (507)
T ss_pred CccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhH
Confidence 356889999999999999999998642 24567999998643221 11 223
Q ss_pred HHHHHHhcCCCCCe-----eeeeEEEEe--------CCeEEEEEeccCCCCHHHHHHhCC--------------------
Q 022401 68 REIINHRSLRHPNI-----VRFKEVILT--------PTHLAIVMEYASGGELFERICNAG-------------------- 114 (298)
Q Consensus 68 ~e~~~l~~l~h~~i-----~~~~~~~~~--------~~~~~lv~~~~~~~sL~~~l~~~~-------------------- 114 (298)
.|+.++.+++|.++ +++++++.. ....++|+||+.+++|.+++....
T Consensus 221 vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~ 300 (507)
T PLN03224 221 VEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDN 300 (507)
T ss_pred HHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhh
Confidence 46666667766543 567777643 356899999999999998885321
Q ss_pred ----CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCC--CCCCCCCcccC
Q 022401 115 ----RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP--KSTVGTPAYIA 188 (298)
Q Consensus 115 ----~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~~a 188 (298)
.++...++.++.+++.++.|||+.+++|+||||+||+++.++. ++|+|||++......... ....+++.|++
T Consensus 301 ~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~--~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~a 378 (507)
T PLN03224 301 MPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQ--VKIIDFGAAVDMCTGINFNPLYGMLDPRYSP 378 (507)
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCc--EEEEeCcCccccccCCccCccccCCCcceeC
Confidence 2355678889999999999999999999999999999998876 999999998643322211 22334789999
Q ss_pred ccccccccC--------------------C-CCccchHHHHHHHHHHHhCCC-CCCCCCCch-------hHHHHHHHHhh
Q 022401 189 PEVLLRHEY--------------------D-GKIADVWSCGVTLYVMLVGGY-PFEDPDEPK-------DFRKTIQRILS 239 (298)
Q Consensus 189 PE~~~~~~~--------------------~-~~~~Di~slG~ll~~l~~g~~-pf~~~~~~~-------~~~~~~~~~~~ 239 (298)
||.+..... . ....|+||+||++++|++|.. ||....... ......+....
T Consensus 379 PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~ 458 (507)
T PLN03224 379 PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKG 458 (507)
T ss_pred hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcc
Confidence 998754321 1 122699999999999999875 665321110 11112222333
Q ss_pred cCCCCCCCCCCCHHHHHHHHHhhhhCC---CCcccccccchhhhHHHhhhhhhh
Q 022401 240 VQYSVPDTNPISQECRDLISRIFVADP---AAVSIFFFPLNMSCLLLFSFVWMF 290 (298)
Q Consensus 240 ~~~~~~~~~~~~~~l~~li~~~l~~dp---~~Rps~~~~l~~~~~~~~~hp~~~ 290 (298)
...+.+.....+++.++|+.+||..+| .+|+|+ .++++|||+.
T Consensus 459 ~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa--------~eaL~Hp~f~ 504 (507)
T PLN03224 459 QKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSV--------GQALSHRFFL 504 (507)
T ss_pred cCCCcccccccChHHHHHHHHHhccCCCCcccCCCH--------HHHhCCCCcC
Confidence 444555555578999999999999866 689977 5666888885
No 386
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2.5e-34 Score=282.68 Aligned_cols=244 Identities=20% Similarity=0.211 Sum_probs=185.4
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEeccC
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYAS 102 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~ 102 (298)
..+...+.||+|+||.||++++..++..||+|.+...... ..+|+..+++++||||+++++++.++...++||||++
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~ 766 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI---PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIE 766 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc---cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCC
Confidence 3466778999999999999999888999999988654322 2346888999999999999999999999999999999
Q ss_pred CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHh---hcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCCCC
Q 022401 103 GGELFERICNAGRFSEDEARFFFQQLISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS 179 (298)
Q Consensus 103 ~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh---~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~~~ 179 (298)
+++|.+++.. ++...+..++.+++.|++||| +.+++||||||+||+++.++. .++. ++...... ....
T Consensus 767 ~g~L~~~l~~---l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~--~~~~-~~~~~~~~---~~~~ 837 (968)
T PLN00113 767 GKNLSEVLRN---LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDE--PHLR-LSLPGLLC---TDTK 837 (968)
T ss_pred CCcHHHHHhc---CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCc--eEEE-eccccccc---cCCC
Confidence 9999999853 788899999999999999999 679999999999999998776 4443 44332111 1123
Q ss_pred CCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCc-hhHHHHHHHHhhc-------CCCCCC----C
Q 022401 180 TVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEP-KDFRKTIQRILSV-------QYSVPD----T 247 (298)
Q Consensus 180 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~-------~~~~~~----~ 247 (298)
..+++.|+|||++.+..++.+ +||||+|+++|||++|..||...... ....+..+..... ...... .
T Consensus 838 ~~~t~~y~aPE~~~~~~~~~~-sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (968)
T PLN00113 838 CFISSAYVAPETRETKDITEK-SDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVN 916 (968)
T ss_pred ccccccccCcccccCCCCCcc-cchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCcc
Confidence 356789999999988777666 99999999999999999998543221 1111111111100 000100 0
Q ss_pred CCCCHHHHHHHHHhhhhCCCCcccccccchhh
Q 022401 248 NPISQECRDLISRIFVADPAAVSIFFFPLNMS 279 (298)
Q Consensus 248 ~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~ 279 (298)
.....++.+++.+||+.||++|||+.+++++.
T Consensus 917 ~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L 948 (968)
T PLN00113 917 QNEIVEVMNLALHCTATDPTARPCANDVLKTL 948 (968)
T ss_pred HHHHHHHHHHHHhhCcCCchhCcCHHHHHHHH
Confidence 01123578899999999999999999998754
No 387
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-36 Score=239.88 Aligned_cols=254 Identities=24% Similarity=0.338 Sum_probs=203.0
Q ss_pred CCCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc--chHHHHHHHHHHhcC-CCCCeeeeeEEEEeCCeE
Q 022401 18 IMHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK--IDENVQREIINHRSL-RHPNIVRFKEVILTPTHL 94 (298)
Q Consensus 18 ~~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~ 94 (298)
..+..++.+-+..||.|+||+|+++.++.+|+..|||++..... ...++..|.....+- .+|||++++|.+..++.-
T Consensus 59 ~~F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdc 138 (361)
T KOG1006|consen 59 HTFTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDC 138 (361)
T ss_pred cccccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCce
Confidence 34455667778899999999999999999999999999987543 345566677655444 689999999999999999
Q ss_pred EEEEeccCCCCHHHHH-----HhCCCCCHHHHHHHHHHHHHHHHHHh-hcCcEEecCCCCceEeeCCCCCCEEEeecCcc
Q 022401 95 AIVMEYASGGELFERI-----CNAGRFSEDEARFFFQQLISGVSYCH-AMQVCHRDLKLENTLLDGSPAPRLKICDFGYS 168 (298)
Q Consensus 95 ~lv~~~~~~~sL~~~l-----~~~~~~~~~~~~~i~~~l~~~l~~Lh-~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~ 168 (298)
++.||.|+ .|+..+- -+...+++..+-.|....+.||+||- +..++|||+||+|||++..|. +||+|||.+
T Consensus 139 WiCMELMd-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~--vKLCDFGIc 215 (361)
T KOG1006|consen 139 WICMELMD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGD--VKLCDFGIC 215 (361)
T ss_pred eeeHHHHh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCC--Eeeecccch
Confidence 99999994 4664332 24456899988899999999999997 568999999999999999998 999999998
Q ss_pred ccccCCCCCCCCCCCCcccCccccccc--cCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCC
Q 022401 169 KSSVLHSQPKSTVGTPAYIAPEVLLRH--EYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPD 246 (298)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~aPE~~~~~--~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (298)
.....+.......|+.-|+|||.+... +++.+ +|+||||+++||+.||..||.. ++...+.+..+..+.+....
T Consensus 216 GqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiR-SDvWSLGITL~EvAtG~fPyr~---w~svfeql~~Vv~gdpp~l~ 291 (361)
T KOG1006|consen 216 GQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIR-SDVWSLGITLYEVATGNFPYRK---WDSVFEQLCQVVIGDPPILL 291 (361)
T ss_pred HhHHHHHHhhhccCCccccChhccCCccCCcchh-hhhhhhcceEeeeecCCCCcch---HHHHHHHHHHHHcCCCCeec
Confidence 755555555566788899999998643 46676 9999999999999999999986 34455556666666554222
Q ss_pred ----CCCCCHHHHHHHHHhhhhCCCCcccccccchh
Q 022401 247 ----TNPISQECRDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 247 ----~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
...++..+..||.-||.+|-..||.+.+++.+
T Consensus 292 ~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 292 FDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred CcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 22478999999999999999999977555543
No 388
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=2.9e-35 Score=253.09 Aligned_cols=258 Identities=24% Similarity=0.374 Sum_probs=204.8
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCC------CCCeeeeeEEEEeCCeEE
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLR------HPNIVRFKEVILTPTHLA 95 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~~ 95 (298)
-++|.+....|+|-||+|..|.++..|..||||++.........=..|+++|++|. --+++.+.-.|.+.+++|
T Consensus 431 D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLC 510 (752)
T KOG0670|consen 431 DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLC 510 (752)
T ss_pred cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeE
Confidence 36899999999999999999999988889999999987766677788999999995 347889999999999999
Q ss_pred EEEeccCCCCHHHHHHhCCC---CCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCcccccc
Q 022401 96 IVMEYASGGELFERICNAGR---FSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 172 (298)
Q Consensus 96 lv~~~~~~~sL~~~l~~~~~---~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~ 172 (298)
+|||.. ..+|.+++...+. +....+..++.|++.||.+|-+.|++|+||||.||||+.+.. .+||||||.|....
T Consensus 511 lVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~-iLKLCDfGSA~~~~ 588 (752)
T KOG0670|consen 511 LVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKN-ILKLCDFGSASFAS 588 (752)
T ss_pred EEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcc-eeeeccCccccccc
Confidence 999988 5589999987663 778889999999999999999999999999999999987665 58999999876433
Q ss_pred CCCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHH-----------HHH--hh
Q 022401 173 LHSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTI-----------QRI--LS 239 (298)
Q Consensus 173 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~-----------~~~--~~ 239 (298)
.+. ......+-.|.|||++.+..|+.. .|+||+||+|||+.||...|.+...-..+.-.+ .+- ..
T Consensus 589 ene-itPYLVSRFYRaPEIiLG~~yd~~-iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~d 666 (752)
T KOG0670|consen 589 ENE-ITPYLVSRFYRAPEIILGLPYDYP-IDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKD 666 (752)
T ss_pred ccc-ccHHHHHHhccCcceeecCcccCC-ccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhh
Confidence 221 122334557999999999999988 999999999999999999998876544332111 110 00
Q ss_pred cCCCC-------------------------C---------CCCCCC-------HHHHHHHHHhhhhCCCCcccccccchh
Q 022401 240 VQYSV-------------------------P---------DTNPIS-------QECRDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 240 ~~~~~-------------------------~---------~~~~~~-------~~l~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
..++. | ....+| ..|.+|+..||..||++|.|.
T Consensus 667 qHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~------ 740 (752)
T KOG0670|consen 667 QHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITV------ 740 (752)
T ss_pred hhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCH------
Confidence 00000 0 000122 569999999999999999966
Q ss_pred hhHHHhhhhhhhh
Q 022401 279 SCLLLFSFVWMFD 291 (298)
Q Consensus 279 ~~~~~~~hp~~~~ 291 (298)
.++|.|||++.
T Consensus 741 --nqAL~HpFi~~ 751 (752)
T KOG0670|consen 741 --NQALKHPFITE 751 (752)
T ss_pred --HHHhcCCcccC
Confidence 67778999874
No 389
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-33 Score=259.53 Aligned_cols=255 Identities=24% Similarity=0.384 Sum_probs=208.1
Q ss_pred CCCCCCCCeeEEeeeccCCeEEEEEEEEcc-------CCcEEEEEEeecCCc--chHHHHHHHHHHhcC-CCCCeeeeeE
Q 022401 17 PIMHDSDRYDFVRDIGSGNFGVARLMRDKV-------TKELVAVKYIERGDK--IDENVQREIINHRSL-RHPNIVRFKE 86 (298)
Q Consensus 17 ~~~~~~~~y~~~~~lg~g~~~~vy~~~~~~-------~~~~~aiK~~~~~~~--~~~~~~~e~~~l~~l-~h~~i~~~~~ 86 (298)
.+....++..+.+.||+|.||.|+++.-.. ....||+|....... ..+.+..|+++++.+ +|+|++.++|
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG 369 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLG 369 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence 455566667888899999999999998431 145799998876443 356788999999999 5999999999
Q ss_pred EEEeCCeEEEEEeccCCCCHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCce
Q 022401 87 VILTPTHLAIVMEYASGGELFERICNAG----------------RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENT 150 (298)
Q Consensus 87 ~~~~~~~~~lv~~~~~~~sL~~~l~~~~----------------~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~ni 150 (298)
++...+.+++|.||+..|+|..++.... .++..+++.++.||+.|++||++..++||||-..||
T Consensus 370 ~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNV 449 (609)
T KOG0200|consen 370 ACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNV 449 (609)
T ss_pred eeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhE
Confidence 9999999999999999999999997655 488999999999999999999999999999999999
Q ss_pred EeeCCCCCCEEEeecCccccccCCCCCC--CC--CCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 022401 151 LLDGSPAPRLKICDFGYSKSSVLHSQPK--ST--VGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPD 225 (298)
Q Consensus 151 lv~~~~~~~~~l~d~~~~~~~~~~~~~~--~~--~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~ 225 (298)
++..+.. +|++|||+++......... .. .-...|||||.+....++.+ +||||+|+++||+++ |..||.+..
T Consensus 450 Li~~~~~--~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~k-SDVWSfGI~L~EifsLG~~PYp~~~ 526 (609)
T KOG0200|consen 450 LITKNKV--IKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSK-SDVWSFGILLWEIFTLGGTPYPGIP 526 (609)
T ss_pred EecCCCE--EEEccccceeccCCCCceEecCCCCccceeecCHHHhccCccccc-chhhHHHHHHHHHhhCCCCCCCCCC
Confidence 9998876 9999999998433222221 11 14567999999999888777 999999999999998 678887633
Q ss_pred CchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchh
Q 022401 226 EPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
.. .+..+ ......+...+..+++++.++++.||+.+|++||++.++.+.
T Consensus 527 ~~---~~l~~-~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~ 575 (609)
T KOG0200|consen 527 PT---EELLE-FLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEF 575 (609)
T ss_pred cH---HHHHH-HHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence 22 23333 445555666677789999999999999999999999988863
No 390
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-33 Score=235.09 Aligned_cols=246 Identities=24% Similarity=0.304 Sum_probs=191.3
Q ss_pred CCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcC--CCCCeeeeeEEEEeCC----e
Q 022401 20 HDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSL--RHPNIVRFKEVILTPT----H 93 (298)
Q Consensus 20 ~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l--~h~~i~~~~~~~~~~~----~ 93 (298)
+...+.++.+.||+|.||.||.++++ |..||||+|... ....+.+|.+|++.. +|+||+.+++.-..++ .
T Consensus 208 TiarqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~sr--dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQ 283 (513)
T KOG2052|consen 208 TIARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSR--DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQ 283 (513)
T ss_pred hhhheeEEEEEecCccccceeecccc--CCceEEEEeccc--chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEE
Confidence 45678999999999999999999997 678999998754 346778888888765 9999999999854432 5
Q ss_pred EEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhh--------cCcEEecCCCCceEeeCCCCCCEEEeec
Q 022401 94 LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA--------MQVCHRDLKLENTLLDGSPAPRLKICDF 165 (298)
Q Consensus 94 ~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~--------~~i~H~dl~p~nilv~~~~~~~~~l~d~ 165 (298)
+++|++|.+.|||.++|.. ..++....+.++..++.||+|||. ..|+|||||..||+|..++. +-|+|+
T Consensus 284 LwLvTdYHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~--C~IADL 360 (513)
T KOG2052|consen 284 LWLVTDYHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT--CCIADL 360 (513)
T ss_pred EEEeeecccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCc--EEEeec
Confidence 7999999999999999966 678999999999999999999993 23999999999999999998 999999
Q ss_pred CccccccCC-----CCCCCCCCCCcccCcccccccc----C-CCCccchHHHHHHHHHHHh----------CCCCCCCCC
Q 022401 166 GYSKSSVLH-----SQPKSTVGTPAYIAPEVLLRHE----Y-DGKIADVWSCGVTLYVMLV----------GGYPFEDPD 225 (298)
Q Consensus 166 ~~~~~~~~~-----~~~~~~~~~~~~~aPE~~~~~~----~-~~~~~Di~slG~ll~~l~~----------g~~pf~~~~ 225 (298)
|+|-+-... .......|+.+|||||++...- + +.+.+||||||.++||++- -++||.+--
T Consensus 361 GLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~V 440 (513)
T KOG2052|consen 361 GLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVV 440 (513)
T ss_pred eeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCC
Confidence 998644333 2334566999999999986542 1 2445899999999999974 246776543
Q ss_pred Cch-hHHHHHHHHhhcCCCCCCCCCCC-----HHHHHHHHHhhhhCCCCcccc
Q 022401 226 EPK-DFRKTIQRILSVQYSVPDTNPIS-----QECRDLISRIFVADPAAVSIF 272 (298)
Q Consensus 226 ~~~-~~~~~~~~~~~~~~~~~~~~~~~-----~~l~~li~~~l~~dp~~Rps~ 272 (298)
..+ .+.++.+=++....+...++.+. ..+..+++.||..||..|.|+
T Consensus 441 p~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltA 493 (513)
T KOG2052|consen 441 PSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTA 493 (513)
T ss_pred CCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHH
Confidence 333 33333333344444433333332 247778999999999999987
No 391
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-33 Score=249.98 Aligned_cols=248 Identities=22% Similarity=0.321 Sum_probs=207.9
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccCCc----EEEEEEeecCC--cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeE
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVTKE----LVAVKYIERGD--KIDENVQREIINHRSLRHPNIVRFKEVILTPTHL 94 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~----~~aiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 94 (298)
.....+..++||+|+||+||++.+-..|+ +||+|++.... +...++..|.-++.+++|||++++++++..+. +
T Consensus 694 kEtelkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~ 772 (1177)
T KOG1025|consen 694 KETELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-L 772 (1177)
T ss_pred hhhhhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-H
Confidence 33445667899999999999999865444 67888776543 34677889999999999999999999996655 8
Q ss_pred EEEEeccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccC
Q 022401 95 AIVMEYASGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 173 (298)
Q Consensus 95 ~lv~~~~~~~sL~~~l~~-~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~ 173 (298)
-+|++|+++|+|.+++.. .+.+.....+-|..||++|+.|||+++++||||-..||||....+ +|+.|||+++....
T Consensus 773 qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~h--vkitdfgla~ll~~ 850 (1177)
T KOG1025|consen 773 QLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNH--VKITDFGLAKLLAP 850 (1177)
T ss_pred HHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCe--EEEEecchhhccCc
Confidence 889999999999999864 457899999999999999999999999999999999999998887 99999999985554
Q ss_pred CCCCCC---CCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCC
Q 022401 174 HSQPKS---TVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNP 249 (298)
Q Consensus 174 ~~~~~~---~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (298)
....-. ....+-|+|-|.+....++.. +||||+|+++||++| |..|+.+... +.+.++.....+++.+..
T Consensus 851 d~~ey~~~~gK~pikwmale~i~~~~~thq-SDVWsfGVtiWElmTFGa~Py~gi~~-----~eI~dlle~geRLsqPpi 924 (1177)
T KOG1025|consen 851 DEKEYSAPGGKVPIKWMALESIRIRKYTHQ-SDVWSFGVTIWELMTFGAKPYDGIPA-----EEIPDLLEKGERLSQPPI 924 (1177)
T ss_pred ccccccccccccCcHHHHHHHhhccCCCch-hhhhhhhhhHHHHHhcCCCccCCCCH-----HHhhHHHhccccCCCCCC
Confidence 443322 224567999998888888776 999999999999998 8899988663 445666666777888888
Q ss_pred CCHHHHHHHHHhhhhCCCCcccccccch
Q 022401 250 ISQECRDLISRIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 250 ~~~~l~~li~~~l~~dp~~Rps~~~~l~ 277 (298)
++.++.-++.+||..|+..||+++++..
T Consensus 925 CtiDVy~~mvkCwmid~~~rp~fkel~~ 952 (1177)
T KOG1025|consen 925 CTIDVYMVMVKCWMIDADSRPTFKELAE 952 (1177)
T ss_pred ccHHHHHHHHHHhccCcccCccHHHHHH
Confidence 9999999999999999999999987765
No 392
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-33 Score=235.90 Aligned_cols=253 Identities=22% Similarity=0.247 Sum_probs=188.5
Q ss_pred CCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhc--CCCCCeeeeeEEEEeCC----
Q 022401 19 MHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRS--LRHPNIVRFKEVILTPT---- 92 (298)
Q Consensus 19 ~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~--l~h~~i~~~~~~~~~~~---- 92 (298)
..+....++.+.+|+|.||.||+|+-. ++.||||++.... .+.+.+|-+|... ++|+||++++++-+...
T Consensus 206 l~~l~pl~l~eli~~Grfg~V~KaqL~--~~~VAVKifp~~~--kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~ 281 (534)
T KOG3653|consen 206 LLELDPLQLLELIGRGRFGCVWKAQLD--NRLVAVKIFPEQE--KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRM 281 (534)
T ss_pred cccCCchhhHHHhhcCccceeehhhcc--CceeEEEecCHHH--HHHHHhHHHHHhccCccchhHHHhhchhccCCcccc
Confidence 344678899999999999999999885 5899999998653 4677777777764 48999999999866443
Q ss_pred eEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhh---------cCcEEecCCCCceEeeCCCCCCEEEe
Q 022401 93 HLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA---------MQVCHRDLKLENTLLDGSPAPRLKIC 163 (298)
Q Consensus 93 ~~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~---------~~i~H~dl~p~nilv~~~~~~~~~l~ 163 (298)
.+++|++|.+.|+|.++|..+ .++..+..+++..+++||+|||+ ..|+|||||..||||.+|.. +.|+
T Consensus 282 eywLVt~fh~kGsL~dyL~~n-tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlT--ccIa 358 (534)
T KOG3653|consen 282 EYWLVTEFHPKGSLCDYLKAN-TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLT--CCIA 358 (534)
T ss_pred ceeEEeeeccCCcHHHHHHhc-cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCc--EEee
Confidence 789999999999999999554 67999999999999999999995 34999999999999999998 9999
Q ss_pred ecCccccccCCC---CCCCCCCCCcccCccccccccCC-----CCccchHHHHHHHHHHHhCCC------------CCCC
Q 022401 164 DFGYSKSSVLHS---QPKSTVGTPAYIAPEVLLRHEYD-----GKIADVWSCGVTLYVMLVGGY------------PFED 223 (298)
Q Consensus 164 d~~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~-----~~~~Di~slG~ll~~l~~g~~------------pf~~ 223 (298)
|||++-+..... ......|+.+|||||++.+..-- -++.||||+|.++||++++-. ||..
T Consensus 359 DFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~ 438 (534)
T KOG3653|consen 359 DFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEA 438 (534)
T ss_pred ccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhH
Confidence 999996554332 22335689999999998765322 345899999999999997532 3321
Q ss_pred -CCCchhHHHHHHHHhhcCCCCCCCC-----CCCHHHHHHHHHhhhhCCCCcccccccchh
Q 022401 224 -PDEPKDFRKTIQRILSVQYSVPDTN-----PISQECRDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 224 -~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
......+.++..-+.....+...+. ....-+.+.++.||..||+.|.|+.=+-++
T Consensus 439 evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR 499 (534)
T KOG3653|consen 439 EVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEER 499 (534)
T ss_pred HhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHH
Confidence 1111111111111111111111111 134569999999999999999998554443
No 393
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-33 Score=227.41 Aligned_cols=258 Identities=25% Similarity=0.392 Sum_probs=202.9
Q ss_pred CCCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC---CcchHHHHHHHHHHhcCCCCCeeeeeEEEEeC---
Q 022401 18 IMHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG---DKIDENVQREIINHRSLRHPNIVRFKEVILTP--- 91 (298)
Q Consensus 18 ~~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 91 (298)
..+...+|.-++.+|.|.- .|..|-+...++.+++|..... ....++..+|...+..+.|+|+++++.++.-.
T Consensus 12 ~ftv~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l 90 (369)
T KOG0665|consen 12 TFTVPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTL 90 (369)
T ss_pred ceeeeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccH
Confidence 3556679999999999998 7778888888999999987653 22235567899999999999999999998643
Q ss_pred ---CeEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCcc
Q 022401 92 ---THLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYS 168 (298)
Q Consensus 92 ---~~~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~ 168 (298)
...|+|+|+++. +|...+. -.++-.++..++.|++.|++|||+.||+||||||+||++..+.. +|+.|||++
T Consensus 91 ~~~~e~y~v~e~m~~-nl~~vi~--~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~--lKi~dfg~a 165 (369)
T KOG0665|consen 91 EEFQEVYLVMELMDA-NLCQVIL--MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCT--LKILDFGLA 165 (369)
T ss_pred HHHHhHHHHHHhhhh-HHHHHHH--HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhh--eeeccchhh
Confidence 357999999954 7877776 34677899999999999999999999999999999999988877 999999999
Q ss_pred ccccCCCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcC-------
Q 022401 169 KSSVLHSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQ------- 241 (298)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~------- 241 (298)
......-.-.....+..|.|||++.+.++..+ +||||+||++.||++|...|.+.+..+++.+.........
T Consensus 166 r~e~~~~~mtpyVvtRyyrapevil~~~~ke~-vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL 244 (369)
T KOG0665|consen 166 RTEDTDFMMTPYVVTRYYRAPEVILGMGYKEN-VDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQL 244 (369)
T ss_pred cccCcccccCchhheeeccCchheeccCCccc-chhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHh
Confidence 86555433334456778999999999997777 9999999999999999999988766555544443322111
Q ss_pred ------------------C--CCCC---------CCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhh
Q 022401 242 ------------------Y--SVPD---------TNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMF 290 (298)
Q Consensus 242 ------------------~--~~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~ 290 (298)
+ ..++ +..-+.-+++++.+||..||++|.|+ .++|.|||+.
T Consensus 245 ~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv--------~daL~HPY~~ 314 (369)
T KOG0665|consen 245 QPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISV--------DDALRHPYIK 314 (369)
T ss_pred hHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccH--------HHHhcCCeee
Confidence 0 0010 00123568999999999999999976 5666788775
No 394
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-34 Score=231.57 Aligned_cols=265 Identities=24% Similarity=0.379 Sum_probs=202.5
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC---cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCC-----e
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD---KIDENVQREIINHRSLRHPNIVRFKEVILTPT-----H 93 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~ 93 (298)
..+.+-.+.||.|+||+||.+.+..+|+.|++|.+..-. ...+.+.+|+.++..++|.|++..+++..-.. .
T Consensus 52 q~Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqE 131 (449)
T KOG0664|consen 52 QQDIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQE 131 (449)
T ss_pred cccCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHH
Confidence 345677789999999999999999999999999876421 22356789999999999999999888865442 4
Q ss_pred EEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccC
Q 022401 94 LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 173 (298)
Q Consensus 94 ~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~ 173 (298)
+|+++|.+. .+|...+-..+.++...++-++.||++||.|||+.||.||||||.|.+++++-. +|++|||+++....
T Consensus 132 iYV~TELmQ-SDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCv--LKICDFGLARvee~ 208 (449)
T KOG0664|consen 132 LYVLTELMQ-SDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCI--LKICDFGLARTWDQ 208 (449)
T ss_pred HHHHHHHHH-hhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCce--EEecccccccccch
Confidence 577888773 356666656677999999999999999999999999999999999999986654 99999999974433
Q ss_pred CCCC--CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHh-------------
Q 022401 174 HSQP--KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRIL------------- 238 (298)
Q Consensus 174 ~~~~--~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~------------- 238 (298)
.... .....+.+|.|||++.+...++.+.||||+||++.|++..+..|+..+....+.- +-.+.
T Consensus 209 d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~l-ItdLLGTPs~EaMr~ACE 287 (449)
T KOG0664|consen 209 RDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQM-IIDLLGTPSQEAMKYACE 287 (449)
T ss_pred hhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHH-HHHHhCCCcHHHHHHHhh
Confidence 2211 2233567899999999998888889999999999999999999988765444322 11111
Q ss_pred -------hcCCC---------CCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhhhhhcCC
Q 022401 239 -------SVQYS---------VPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDATENYHS 298 (298)
Q Consensus 239 -------~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~~~~~~~ 298 (298)
..... +.....-..+...++..+|..||+.|.+. .+.+.|+++.+.+.-+||
T Consensus 288 GAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~--------~~A~~~~~~~e~R~r~~s 355 (449)
T KOG0664|consen 288 GAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISV--------EEALQHRYLEEGRLRFHS 355 (449)
T ss_pred hhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccH--------hhhcccccccccceeeee
Confidence 11111 11111234568888899999999999954 667788888877766654
No 395
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-33 Score=253.00 Aligned_cols=248 Identities=28% Similarity=0.359 Sum_probs=190.8
Q ss_pred EeeeccCCeE-EEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcC-CCCCeeeeeEEEEeCCeEEEEEeccCCCC
Q 022401 28 VRDIGSGNFG-VARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSL-RHPNIVRFKEVILTPTHLAIVMEYASGGE 105 (298)
Q Consensus 28 ~~~lg~g~~~-~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~~~~~~~s 105 (298)
.+.+|.|+.| .||.+.. .|+.||||++-.+ ......+|+..|+.- +||||+++++.-.+....|+..|.|. .+
T Consensus 514 ~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~e--~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~-~s 588 (903)
T KOG1027|consen 514 KEILGYGSNGTVVFRGVY--EGREVAVKRLLEE--FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA-CS 588 (903)
T ss_pred HHHcccCCCCcEEEEEee--CCceehHHHHhhH--hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh-hh
Confidence 3567899998 6788776 4789999987643 234567899999877 69999999999888899999999994 59
Q ss_pred HHHHHHhCC-C---CCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeC---CCCCCEEEeecCccccccCCCC--
Q 022401 106 LFERICNAG-R---FSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDG---SPAPRLKICDFGYSKSSVLHSQ-- 176 (298)
Q Consensus 106 L~~~l~~~~-~---~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~---~~~~~~~l~d~~~~~~~~~~~~-- 176 (298)
|.+++.... . ......+..+.|++.|+++||+.+|+||||||.||||+. ++..+++|+|||+|........
T Consensus 589 L~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~ 668 (903)
T KOG1027|consen 589 LQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSF 668 (903)
T ss_pred HHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcchh
Confidence 999997641 1 111345778999999999999999999999999999976 5656799999999975544333
Q ss_pred --CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhC-CCCCCCCCCchhHHHHHHHHhhcCCCCCCCC-CCCH
Q 022401 177 --PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVG-GYPFEDPDEPKDFRKTIQRILSVQYSVPDTN-PISQ 252 (298)
Q Consensus 177 --~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 252 (298)
.....|+-.|+|||++........ +||||+||++|+.++| ..||+..-+ ....|..+...+-.-. ....
T Consensus 669 ~r~s~~sGt~GW~APE~L~~~~~~~a-vDiFslGCvfyYvltgG~HpFGd~~~------R~~NIl~~~~~L~~L~~~~d~ 741 (903)
T KOG1027|consen 669 SRLSGGSGTSGWQAPEQLREDRKTQA-VDIFSLGCVFYYVLTGGSHPFGDSLE------RQANILTGNYTLVHLEPLPDC 741 (903)
T ss_pred hcccCCCCcccccCHHHHhccccCcc-cchhhcCceEEEEecCCccCCCchHH------hhhhhhcCccceeeeccCchH
Confidence 344568899999999987776554 9999999999999996 689987432 2233444444322211 1122
Q ss_pred HHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhhhhh
Q 022401 253 ECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDATEN 295 (298)
Q Consensus 253 ~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~~~~ 295 (298)
+..+||.+|++.+|..||++ .+++.|||+=+..|.
T Consensus 742 eA~dLI~~ml~~dP~~RPsa--------~~VL~HPlFW~~ekr 776 (903)
T KOG1027|consen 742 EAKDLISRMLNPDPQLRPSA--------TDVLNHPLFWDSEKR 776 (903)
T ss_pred HHHHHHHHhcCCCcccCCCH--------HHHhCCCccCChHHH
Confidence 89999999999999999988 566678887655553
No 396
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-33 Score=241.22 Aligned_cols=199 Identities=29% Similarity=0.461 Sum_probs=176.8
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchH---------HHHHHHHHHhcCC---CCCeeeeeEEEE
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDE---------NVQREIINHRSLR---HPNIVRFKEVIL 89 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~---------~~~~e~~~l~~l~---h~~i~~~~~~~~ 89 (298)
-.+|..++.+|+|+||.|+.|.++.+...|++|.+.++.-..+ .+-.|++||.+++ |+||++++++|+
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 3569999999999999999999999999999999876532222 2336999999996 999999999999
Q ss_pred eCCeEEEEEecc-CCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCcc
Q 022401 90 TPTHLAIVMEYA-SGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYS 168 (298)
Q Consensus 90 ~~~~~~lv~~~~-~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~ 168 (298)
+++.+|+++|-. +|-+|.+++.-.+.+++.+.+.|++|++.|+++||+.||+|||||-+||.++++|- +||+|||.+
T Consensus 640 ddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~--~klidfgsa 717 (772)
T KOG1152|consen 640 DDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGF--VKLIDFGSA 717 (772)
T ss_pred cCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCe--EEEeeccch
Confidence 999999999977 57889999999999999999999999999999999999999999999999999987 999999986
Q ss_pred ccccCCCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCC
Q 022401 169 KSSVLHSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFED 223 (298)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~ 223 (298)
.. ..+++-....|+..|.|||.+.+.+|-.+.-|||++|+++|-++....||..
T Consensus 718 a~-~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 718 AY-TKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred hh-hcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 42 3345556778999999999999999999989999999999999999888753
No 397
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.98 E-value=1.5e-30 Score=210.85 Aligned_cols=208 Identities=42% Similarity=0.637 Sum_probs=180.0
Q ss_pred eccCCeEEEEEEEEccCCcEEEEEEeecCCcc--hHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEeccCCCCHHH
Q 022401 31 IGSGNFGVARLMRDKVTKELVAVKYIERGDKI--DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFE 108 (298)
Q Consensus 31 lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~~~sL~~ 108 (298)
||+|.+|.||++....+++.+++|++...... .+.+.+|+..++.++|++++++++++......+++++++++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 68999999999999878999999998876542 5678999999999999999999999999999999999999899999
Q ss_pred HHHhC-CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeC-CCCCCEEEeecCccccccCCC-CCCCCCCCCc
Q 022401 109 RICNA-GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDG-SPAPRLKICDFGYSKSSVLHS-QPKSTVGTPA 185 (298)
Q Consensus 109 ~l~~~-~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~-~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~ 185 (298)
++... ..++...++.++.+++.++++||+.|++|+||+|.||+++. ++. ++|+||+.+....... ......+...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~--~~l~d~~~~~~~~~~~~~~~~~~~~~~ 158 (215)
T cd00180 81 LLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGK--VKLADFGLSKLLTSDKSLLKTIVGTPA 158 (215)
T ss_pred HHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCc--EEEecCCceEEccCCcchhhcccCCCC
Confidence 98766 57899999999999999999999999999999999999998 665 9999999876443332 1234557788
Q ss_pred ccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhhhhC
Q 022401 186 YIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIFVAD 265 (298)
Q Consensus 186 ~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d 265 (298)
|++||..........++|+|++|++++++ .++.+++.+|++.|
T Consensus 159 ~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------~~~~~~l~~~l~~~ 201 (215)
T cd00180 159 YMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------PELKDLIRKMLQKD 201 (215)
T ss_pred ccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------HHHHHHHHHHhhCC
Confidence 99999987662334449999999999999 67999999999999
Q ss_pred CCCcccccccch
Q 022401 266 PAAVSIFFFPLN 277 (298)
Q Consensus 266 p~~Rps~~~~l~ 277 (298)
|.+||++.++++
T Consensus 202 p~~R~~~~~l~~ 213 (215)
T cd00180 202 PEKRPSAKEILE 213 (215)
T ss_pred cccCcCHHHHhh
Confidence 999999877765
No 398
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.98 E-value=4e-33 Score=246.08 Aligned_cols=256 Identities=28% Similarity=0.408 Sum_probs=212.1
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcc-hHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEecc
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKI-DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYA 101 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~ 101 (298)
++|+++..+|.|.+|.||+|+++.++++.|+|++...... ..-+.+|+.+++..+||||+.+++.+.....+++.||||
T Consensus 15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEyc 94 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYC 94 (829)
T ss_pred cchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEec
Confidence 5899999999999999999999999999999999876543 456778999999999999999999999999999999999
Q ss_pred CCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccc-cccCCCCCCCC
Q 022401 102 SGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK-SSVLHSQPKST 180 (298)
Q Consensus 102 ~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~-~~~~~~~~~~~ 180 (298)
.+++|.+.-+-.+++++.++....+..++++.|||+.|-+|||||-.||++++.|+ +++.|||.+. ...........
T Consensus 95 gggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gD--vklaDfgvsaqitati~Krksf 172 (829)
T KOG0576|consen 95 GGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGD--VKLADFGVSAQITATIAKRKSF 172 (829)
T ss_pred CCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCc--eeecccCchhhhhhhhhhhhcc
Confidence 99999998888889999999999999999999999999999999999999999998 9999999875 33334555777
Q ss_pred CCCCcccCccccc---cccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHH
Q 022401 181 VGTPAYIAPEVLL---RHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDL 257 (298)
Q Consensus 181 ~~~~~~~aPE~~~---~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (298)
.|+++|+|||+.. ..+|.. .+|||++|+...|+-..+.|--... ......++.+=......+.+...+++.+-+|
T Consensus 173 iGtpywmapEvaaverkggynq-lcdiwa~gitAiel~eLqpplfdlh-pmr~l~LmTkS~~qpp~lkDk~kws~~fh~f 250 (829)
T KOG0576|consen 173 IGTPYWMAPEVAAVERKGGYNQ-LCDIWALGITAIELGELQPPLFDLH-PMRALFLMTKSGFQPPTLKDKTKWSEFFHNF 250 (829)
T ss_pred cCCccccchhHHHHHhcccccc-cccccccccchhhhhhcCCcccccc-hHHHHHHhhccCCCCCcccCCccchHHHHHH
Confidence 8999999999743 334444 4999999999999988776643322 1222233333222333455566689999999
Q ss_pred HHHhhhhCCCCcccccccchhhhHHHhhhhhhh
Q 022401 258 ISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMF 290 (298)
Q Consensus 258 i~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~ 290 (298)
++.+|.++|.+||++ ..+++|||++
T Consensus 251 vK~altknpKkRpta--------eklL~h~fvs 275 (829)
T KOG0576|consen 251 VKGALTKNPKKRPTA--------EKLLQHPFVS 275 (829)
T ss_pred HHHHhcCCCccCCCh--------hhheeceeec
Confidence 999999999999988 5555788876
No 399
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=4.5e-31 Score=203.10 Aligned_cols=203 Identities=26% Similarity=0.399 Sum_probs=168.5
Q ss_pred CCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC--CcchHHHHHHHHHHhcC-CCCCeeeeeEEEEeCCeEEE
Q 022401 20 HDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG--DKIDENVQREIINHRSL-RHPNIVRFKEVILTPTHLAI 96 (298)
Q Consensus 20 ~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l 96 (298)
...++..-+..||.|++|.|=+.++..+|...|+|.+... .+...+..+|+.+..+- .||.++.++|....+..+++
T Consensus 43 V~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwI 122 (282)
T KOG0984|consen 43 VPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWI 122 (282)
T ss_pred cchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEE
Confidence 3445566678899999999999999999999999998753 34445566788776655 79999999999999999999
Q ss_pred EEeccCCCCHHHH----HHhCCCCCHHHHHHHHHHHHHHHHHHhh-cCcEEecCCCCceEeeCCCCCCEEEeecCccccc
Q 022401 97 VMEYASGGELFER----ICNAGRFSEDEARFFFQQLISGVSYCHA-MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSS 171 (298)
Q Consensus 97 v~~~~~~~sL~~~----l~~~~~~~~~~~~~i~~~l~~~l~~Lh~-~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~ 171 (298)
.||.|+ .||..+ +..++.+++.-+-+|+..++.||.|||+ ..++|||+||+|||++.+|. +|++|||.+...
T Consensus 123 cME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~Gq--VKiCDFGIsG~L 199 (282)
T KOG0984|consen 123 CMELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQ--VKICDFGISGYL 199 (282)
T ss_pred eHHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCc--EEEcccccceee
Confidence 999994 477443 4567889999999999999999999996 47999999999999999998 999999988655
Q ss_pred cCCCCCCCCCCCCcccCccccc----cccCCCCccchHHHHHHHHHHHhCCCCCCCCCC
Q 022401 172 VLHSQPKSTVGTPAYIAPEVLL----RHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDE 226 (298)
Q Consensus 172 ~~~~~~~~~~~~~~~~aPE~~~----~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 226 (298)
..+.......|+.-|+|||.+. ..+|+.+ +||||||+.+.||.+++.||..-..
T Consensus 200 ~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vk-sDvWSLGItmiElA~lr~PY~~w~t 257 (282)
T KOG0984|consen 200 VDSIAKTMDAGCKPYMAPERINPELNQKGYSVK-SDVWSLGITMIEMAILRFPYESWGT 257 (282)
T ss_pred hhhhHHHHhcCCCccCChhhcCcccCcccceee-hhhhhhhhhhhhhhhccccccccCC
Confidence 4444444467888899999865 3366666 9999999999999999999876543
No 400
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.97 E-value=3.8e-31 Score=222.87 Aligned_cols=264 Identities=23% Similarity=0.337 Sum_probs=202.3
Q ss_pred CCCCCCCeeEEeeeccCCeEEEEEEEEcc---CCcEEEEEEeecCCcchHHHHHHHHHHhcC-CCCCeeeeeEEEEeCCe
Q 022401 18 IMHDSDRYDFVRDIGSGNFGVARLMRDKV---TKELVAVKYIERGDKIDENVQREIINHRSL-RHPNIVRFKEVILTPTH 93 (298)
Q Consensus 18 ~~~~~~~y~~~~~lg~g~~~~vy~~~~~~---~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~ 93 (298)
.....+.|.++++||+|.|+.||++.... ..+.||+|.+...... ..+.+|+++|.++ .+.||+++.+++..++.
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p-~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~ 109 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSP-SRILNELEMLYRLGGSDNIIKLNGCFRNNDQ 109 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCc-hHHHHHHHHHHHhccchhhhcchhhhccCCe
Confidence 34456789999999999999999999876 7889999998765433 5688999999999 58999999999999999
Q ss_pred EEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccC
Q 022401 94 LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 173 (298)
Q Consensus 94 ~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~ 173 (298)
.++|+||+++....++... ++..++..+++.++.||.++|++||+||||||.|++.+.... +-.|+|||++.....
T Consensus 110 v~ivlp~~~H~~f~~l~~~---l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~-rg~LvDFgLA~~~d~ 185 (418)
T KOG1167|consen 110 VAIVLPYFEHDRFRDLYRS---LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQ-RGVLVDFGLAQRYDG 185 (418)
T ss_pred eEEEecccCccCHHHHHhc---CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccC-CceEEechhHHHHHh
Confidence 9999999999888887755 568999999999999999999999999999999999987665 578999999851000
Q ss_pred --------------CCC-------------------------------CCCCCCCCcccCccccccccCCCCccchHHHH
Q 022401 174 --------------HSQ-------------------------------PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCG 208 (298)
Q Consensus 174 --------------~~~-------------------------------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG 208 (298)
... .....|+++|.|||++...+--+.+.||||.|
T Consensus 186 ~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~G 265 (418)
T KOG1167|consen 186 YQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAG 265 (418)
T ss_pred hhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeecc
Confidence 000 01113788999999998887767779999999
Q ss_pred HHHHHHHhCCCCCCCCCCc-hhHHHHHHH---------------------------------Hhhc--------CC---C
Q 022401 209 VTLYVMLVGGYPFEDPDEP-KDFRKTIQR---------------------------------ILSV--------QY---S 243 (298)
Q Consensus 209 ~ll~~l~~g~~pf~~~~~~-~~~~~~~~~---------------------------------~~~~--------~~---~ 243 (298)
++++.++++..||-...+. +.+.+...- +... .. .
T Consensus 266 VI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~ 345 (418)
T KOG1167|consen 266 VILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTE 345 (418)
T ss_pred ceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccccccccee
Confidence 9999999999997443321 111111000 0000 00 0
Q ss_pred -CCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhhhh
Q 022401 244 -VPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDATE 294 (298)
Q Consensus 244 -~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~~~ 294 (298)
..-....|..+.+|+.+||..||.+|.|+ ...|.|||+.+..+
T Consensus 346 ~~~~~d~~~~~~~dlLdk~le~np~kRitA--------EeALkHpFF~~~~~ 389 (418)
T KOG1167|consen 346 REIGSDVFPALLLDLLDKCLELNPQKRITA--------EDALKHPFFDEADR 389 (418)
T ss_pred eccccccccHHHHHHHHHHccCChhhcccH--------HHHhcCcCCcchhh
Confidence 00011245689999999999999999998 45557888876543
No 401
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.97 E-value=1.7e-29 Score=207.32 Aligned_cols=196 Identities=42% Similarity=0.700 Sum_probs=171.2
Q ss_pred eeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc--chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEeccC
Q 022401 25 YDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK--IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYAS 102 (298)
Q Consensus 25 y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~ 102 (298)
|.+.+.||.|++|.||++....+++.+++|.+..... ....+.+|+..+++++|+|++++++++......++++++++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 6788999999999999999988889999999886543 35678899999999999999999999998899999999999
Q ss_pred CCCHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC--CCCC
Q 022401 103 GGELFERICNAGR-FSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS--QPKS 179 (298)
Q Consensus 103 ~~sL~~~l~~~~~-~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~--~~~~ 179 (298)
+++|.+++..... ++...+..++.+++.++.+||+.+++|+|++|.||+++.++. ++|+|||.+....... ....
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~--~~l~d~g~~~~~~~~~~~~~~~ 158 (225)
T smart00221 81 GGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGL--VKLADFGLARFIHRDLAALLKT 158 (225)
T ss_pred CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC--EEEeeCceeeEecCcccccccc
Confidence 9999999987766 899999999999999999999999999999999999998866 9999999887554432 2344
Q ss_pred CCCCCcccCcccc-ccccCCCCccchHHHHHHHHHHHhCCCCCCC
Q 022401 180 TVGTPAYIAPEVL-LRHEYDGKIADVWSCGVTLYVMLVGGYPFED 223 (298)
Q Consensus 180 ~~~~~~~~aPE~~-~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~ 223 (298)
..+...|++||.+ ....++. ++|+|+||++++++++|..||..
T Consensus 159 ~~~~~~~~~pe~~~~~~~~~~-~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 159 VKGTPFYLAPEVLLGGKGYGE-AVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred eeccCCcCCHhHhcCCCCCCc-hhhHHHHHHHHHHHHHCCCCccc
Confidence 4567789999998 4445555 49999999999999999999965
No 402
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=7.8e-31 Score=209.53 Aligned_cols=251 Identities=24% Similarity=0.398 Sum_probs=192.8
Q ss_pred cCCCCCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcC-CCCCeeeeeEE-EEeCC
Q 022401 15 DMPIMHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSL-RHPNIVRFKEV-ILTPT 92 (298)
Q Consensus 15 ~~~~~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~-~~~~~ 92 (298)
-++-+.-.+.|.|.+.||+|.||.+-+++++.+++.+++|.+........+|.+|...---| .|.||+.-++. |...+
T Consensus 16 el~kv~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d 95 (378)
T KOG1345|consen 16 ELKKVDLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSD 95 (378)
T ss_pred cccccchhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCc
Confidence 34455566789999999999999999999999999999999999888888899988765555 47899887766 45566
Q ss_pred eEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCcccccc
Q 022401 93 HLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 172 (298)
Q Consensus 93 ~~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~ 172 (298)
.+++++||++.|+|.+-+... .+.+...+.++.|++.||.|+|+.++||||||.+||||-...-.++||+|||..+...
T Consensus 96 ~YvF~qE~aP~gdL~snv~~~-GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g 174 (378)
T KOG1345|consen 96 AYVFVQEFAPRGDLRSNVEAA-GIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVG 174 (378)
T ss_pred eEEEeeccCccchhhhhcCcc-cccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccC
Confidence 888999999999999888554 4688889999999999999999999999999999999944444489999999876332
Q ss_pred CCCCCCCCCCCCcccCcccccccc-----CCCCccchHHHHHHHHHHHhCCCCCCCCCCchh-HHHHHHHHhhcCCCCCC
Q 022401 173 LHSQPKSTVGTPAYIAPEVLLRHE-----YDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKD-FRKTIQRILSVQYSVPD 246 (298)
Q Consensus 173 ~~~~~~~~~~~~~~~aPE~~~~~~-----~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~ 246 (298)
. ..........|.+||.+.... ..+. +|+|+||++++.++||..||+.....+. ..+..+.........|.
T Consensus 175 ~--tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps-~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~ 251 (378)
T KOG1345|consen 175 T--TVKYLEYVNNYHAPELCDTVVNEKLVVNPS-TDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPK 251 (378)
T ss_pred c--eehhhhhhcccCCcHHHhhccccceEeccc-ccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCch
Confidence 2 112222345578888764321 2233 8999999999999999999996543332 22333333333333332
Q ss_pred -CCCCCHHHHHHHHHhhhhCCCCc
Q 022401 247 -TNPISQECRDLISRIFVADPAAV 269 (298)
Q Consensus 247 -~~~~~~~l~~li~~~l~~dp~~R 269 (298)
.+..++.+..+.++-|+.+|++|
T Consensus 252 ~F~~fs~~a~r~Fkk~lt~~~~dr 275 (378)
T KOG1345|consen 252 KFNPFSEKALRLFKKSLTPRFKDR 275 (378)
T ss_pred hhcccCHHHHHHHHHhcCCccccc
Confidence 33478899999999999999999
No 403
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.97 E-value=4.1e-30 Score=214.80 Aligned_cols=249 Identities=18% Similarity=0.218 Sum_probs=199.2
Q ss_pred CCCCCeeEEeeeccCCeEEEEEEEEccCC-----cEEEEEEeecCCcc--hHHHHHHHHHHhcCCCCCeeeeeEEEEe-C
Q 022401 20 HDSDRYDFVRDIGSGNFGVARLMRDKVTK-----ELVAVKYIERGDKI--DENVQREIINHRSLRHPNIVRFKEVILT-P 91 (298)
Q Consensus 20 ~~~~~y~~~~~lg~g~~~~vy~~~~~~~~-----~~~aiK~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~ 91 (298)
....++++.-.+.+|.||.||.+.++... +.+.+|.+...... ...+..|--.+..+.|||+..+.+++.. .
T Consensus 281 v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~ 360 (563)
T KOG1024|consen 281 VQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDY 360 (563)
T ss_pred hhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeecc
Confidence 44567888899999999999999765332 23455554433322 2346678888888899999999998765 4
Q ss_pred CeEEEEEeccCCCCHHHHHHh--------CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEe
Q 022401 92 THLAIVMEYASGGELFERICN--------AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKIC 163 (298)
Q Consensus 92 ~~~~lv~~~~~~~sL~~~l~~--------~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~ 163 (298)
...++++.+..-++|..++.. .+.++..++..++.|++.|++|||+.|++|.||-..|.++++.-. +||+
T Consensus 361 ~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~Lq--Vklt 438 (563)
T KOG1024|consen 361 ATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQ--VKLT 438 (563)
T ss_pred CcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhhee--EEec
Confidence 578999999999999999861 124777888999999999999999999999999999999987654 9999
Q ss_pred ecCccccc---cCCCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh-CCCCCCCCCCchhHHHHHHHHhh
Q 022401 164 DFGYSKSS---VLHSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV-GGYPFEDPDEPKDFRKTIQRILS 239 (298)
Q Consensus 164 d~~~~~~~---~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~ 239 (298)
|-.+++.. ..............|||||.+.+..++.. +|+||||+++|||+| |+.|+...+.. .+.....
T Consensus 439 DsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssa-sDvWsfGVllWELmtlg~~PyaeIDPf-----Em~~ylk 512 (563)
T KOG1024|consen 439 DSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSA-SDVWSFGVLLWELMTLGKLPYAEIDPF-----EMEHYLK 512 (563)
T ss_pred cchhccccCcccccccCCCCCCcccccCHHHHhhhhhcch-hhhHHHHHHHHHHHhcCCCCccccCHH-----HHHHHHh
Confidence 99988632 22344455566778999999999988776 999999999999998 78898876542 2344555
Q ss_pred cCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccc
Q 022401 240 VQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPL 276 (298)
Q Consensus 240 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l 276 (298)
...++..+.++|+++..++--||..+|++||+++|+.
T Consensus 513 dGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv 549 (563)
T KOG1024|consen 513 DGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLV 549 (563)
T ss_pred ccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHH
Confidence 6778888888999999999999999999999997765
No 404
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.96 E-value=5.9e-29 Score=239.22 Aligned_cols=201 Identities=14% Similarity=0.156 Sum_probs=141.0
Q ss_pred CCC-CCeeeeeEEE-------EeCCeEEEEEeccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCC
Q 022401 76 LRH-PNIVRFKEVI-------LTPTHLAIVMEYASGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLK 146 (298)
Q Consensus 76 l~h-~~i~~~~~~~-------~~~~~~~lv~~~~~~~sL~~~l~~-~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~ 146 (298)
++| +||+++.+++ .....++.++|++ +++|.+++.. ...+++.+++.+++||+.||+|||++||+|||||
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlK 107 (793)
T PLN00181 29 LSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVR 107 (793)
T ss_pred hhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCC
Confidence 344 5777777766 2334677888887 5699999965 3468999999999999999999999999999999
Q ss_pred CCceEeeCCCC-----------------CCEEEeecCccccccCCC-----------------CCCCCCCCCcccCcccc
Q 022401 147 LENTLLDGSPA-----------------PRLKICDFGYSKSSVLHS-----------------QPKSTVGTPAYIAPEVL 192 (298)
Q Consensus 147 p~nilv~~~~~-----------------~~~~l~d~~~~~~~~~~~-----------------~~~~~~~~~~~~aPE~~ 192 (298)
|+|||++..+. ..+|++|||+++...... ......+++.|+|||++
T Consensus 108 P~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~ 187 (793)
T PLN00181 108 PSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEED 187 (793)
T ss_pred chhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhh
Confidence 99999965332 236666776664321100 00112467789999999
Q ss_pred ccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccc
Q 022401 193 LRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIFVADPAAVSIF 272 (298)
Q Consensus 193 ~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~ 272 (298)
.+..++.+ +|||||||++|||++|..|+..... ......... .. +.......+...++.+||..||.+||++
T Consensus 188 ~~~~~~~~-sDVwSlGviL~ELl~~~~~~~~~~~--~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~L~~~P~~Rps~ 259 (793)
T PLN00181 188 NGSSSNCA-SDVYRLGVLLFELFCPVSSREEKSR--TMSSLRHRV----LP-PQILLNWPKEASFCLWLLHPEPSCRPSM 259 (793)
T ss_pred ccCCCCch-hhhhhHHHHHHHHhhCCCchhhHHH--HHHHHHHhh----cC-hhhhhcCHHHHHHHHHhCCCChhhCcCh
Confidence 88888665 9999999999999998887653211 111111111 11 1111124567789999999999999988
Q ss_pred cccchhhhHHHhhhhhhhhhh
Q 022401 273 FFPLNMSCLLLFSFVWMFDAT 293 (298)
Q Consensus 273 ~~~l~~~~~~~~~hp~~~~~~ 293 (298)
.++++|||+.+..
T Consensus 260 --------~eil~h~~~~~~~ 272 (793)
T PLN00181 260 --------SELLQSEFINEPR 272 (793)
T ss_pred --------HHHhhchhhhhhh
Confidence 4555788887643
No 405
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.95 E-value=8.9e-27 Score=201.73 Aligned_cols=252 Identities=23% Similarity=0.200 Sum_probs=195.8
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCC-cEEEEEEeecCCcch-HHHHHHHHHHhcCC----CCCeeeeeEEE-EeCCeEEE
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTK-ELVAVKYIERGDKID-ENVQREIINHRSLR----HPNIVRFKEVI-LTPTHLAI 96 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~-~~~aiK~~~~~~~~~-~~~~~e~~~l~~l~----h~~i~~~~~~~-~~~~~~~l 96 (298)
+|.+.+.||+|+||.||.+.+..++ ..+|+|......... ..+..|..++..+. .+++..+++.+ ..+..-++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 8999999999999999999997664 578888776643222 26788888888886 36899999998 47778899
Q ss_pred EEeccCCCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCC-C--CCEEEeecCccc--
Q 022401 97 VMEYASGGELFERICNA--GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSP-A--PRLKICDFGYSK-- 169 (298)
Q Consensus 97 v~~~~~~~sL~~~l~~~--~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~-~--~~~~l~d~~~~~-- 169 (298)
||+.. |.+|.++.... ..++..++..++.|++.+|++||+.|++||||||.|+.+...+ . ..++|.|||+++
T Consensus 99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~ 177 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRF 177 (322)
T ss_pred EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccc
Confidence 99988 77999988544 4799999999999999999999999999999999999997654 1 359999999998
Q ss_pred cccCCCC---------CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhc
Q 022401 170 SSVLHSQ---------PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSV 240 (298)
Q Consensus 170 ~~~~~~~---------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 240 (298)
....... .....|+.+|.|+..+.+...... .|+||+++++.+++.|.+||..........+..+.....
T Consensus 178 ~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~-DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~ 256 (322)
T KOG1164|consen 178 KYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRR-DDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKL 256 (322)
T ss_pred cccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCc-hhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhhh
Confidence 3211111 122348999999999988888776 999999999999999999997766543322222222111
Q ss_pred CCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchh
Q 022401 241 QYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 241 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
.... .....+.++.++...+-+.+...+|.+..+.+.
T Consensus 257 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~ 293 (322)
T KOG1164|consen 257 LTDR-FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAEL 293 (322)
T ss_pred cccc-ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHH
Confidence 1111 222356789999888888999999999777764
No 406
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.95 E-value=5.1e-27 Score=185.91 Aligned_cols=165 Identities=19% Similarity=0.202 Sum_probs=122.8
Q ss_pred CCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCCCCCCC
Q 022401 104 GELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVG 182 (298)
Q Consensus 104 ~sL~~~l~~-~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 182 (298)
|+|.+++.. +..+++.+++.++.|++.||+|||+.+ ||+||+++.++. +++ ||++...... ...+
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~--~~~--fG~~~~~~~~----~~~g 66 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGL--LKL--DGSVAFKTPE----QSRV 66 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccc--eee--ccceEeeccc----cCCC
Confidence 588888876 456999999999999999999999998 999999998887 777 9987643322 2257
Q ss_pred CCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchh-HHHHHHHHhhcCCC-CCCCCCCCH--HHHHHH
Q 022401 183 TPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKD-FRKTIQRILSVQYS-VPDTNPISQ--ECRDLI 258 (298)
Q Consensus 183 ~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~--~l~~li 258 (298)
++.|+|||++.+..++.+ +||||+|+++|+|++|..||........ +............. .+....++. ++.+++
T Consensus 67 ~~~y~aPE~~~~~~~~~~-~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 145 (176)
T smart00750 67 DPYFMAPEVIQGQSYTEK-ADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFM 145 (176)
T ss_pred cccccChHHhcCCCCcch-hhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHH
Confidence 899999999988887665 9999999999999999999976543222 22222221111110 011112333 699999
Q ss_pred HHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 259 SRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 259 ~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
.+||+.||.+||++ .+++.|+|+..
T Consensus 146 ~~cl~~~p~~Rp~~--------~~ll~~~~~~~ 170 (176)
T smart00750 146 RVCASRLPQRREAA--------NHYLAHCRALF 170 (176)
T ss_pred HHHHhcccccccCH--------HHHHHHHHHHH
Confidence 99999999999987 45556777663
No 407
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.94 E-value=3.5e-26 Score=180.16 Aligned_cols=253 Identities=21% Similarity=0.245 Sum_probs=200.8
Q ss_pred CCCCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCC-CCeeeeeEEEEeCCeEE
Q 022401 17 PIMHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRH-PNIVRFKEVILTPTHLA 95 (298)
Q Consensus 17 ~~~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~ 95 (298)
+-.+..++|.++++||+|+||.+|.+..-.+|..||||.-... ...+.+.-|..+.+.|++ .+|..+..+......-.
T Consensus 9 ~~~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~-a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynv 87 (341)
T KOG1163|consen 9 EELIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSK-AKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNV 87 (341)
T ss_pred hhheeccceEEEEeecCCchhheeeeeeccCCceEEEEeeccc-CCCcchhHHHHHHHHhccCCCCchhhhhccccccce
Confidence 4456678999999999999999999999999999999965443 344667788899998865 78888888888888889
Q ss_pred EEEeccCCCCHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCC-CEEEeecCccccccC
Q 022401 96 IVMEYASGGELFERIC-NAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAP-RLKICDFGYSKSSVL 173 (298)
Q Consensus 96 lv~~~~~~~sL~~~l~-~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~-~~~l~d~~~~~~~~~ 173 (298)
+||+.. |-||.+++. -...++..+++-++-|++.-++|+|.++++||||||+|.+..-+.++ ++.|+|||++.....
T Consensus 88 lVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d 166 (341)
T KOG1163|consen 88 LVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRD 166 (341)
T ss_pred eeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhcc
Confidence 999998 679988875 33468999999999999999999999999999999999999765554 489999999964332
Q ss_pred --------CCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCC
Q 022401 174 --------HSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVP 245 (298)
Q Consensus 174 --------~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 245 (298)
........|+.+|.|-..+.+...+.. .|+-|+|+++.++--|.+||++..... ......++.+.....+
T Consensus 167 ~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRR-DDmeSvgYvLmYfnrG~LPWQglka~t-k~QKyEkI~EkK~s~~ 244 (341)
T KOG1163|consen 167 IRTRQHIPYREDRNLTGTARYASINAHLGIEQSRR-DDMESVGYVLMYFNRGSLPWQGLKAAT-KKQKYEKISEKKMSTP 244 (341)
T ss_pred ccccccCccccCCccceeeeehhhhhhhhhhhhhh-hhhhhhcceeeeeecCCCcccccchhh-HHHHHHHHHHhhcCCC
Confidence 223344558889999888777776666 999999999999999999999876433 2334445554444433
Q ss_pred C---CCCCCHHHHHHHHHhhhhCCCCccccc
Q 022401 246 D---TNPISQECRDLISRIFVADPAAVSIFF 273 (298)
Q Consensus 246 ~---~~~~~~~l~~li~~~l~~dp~~Rps~~ 273 (298)
. ....|.|+.-.+.-|-..-=++-|.+.
T Consensus 245 ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ 275 (341)
T KOG1163|consen 245 IEVLCKGFPAEFAMYLNYCRGLGFEEKPDYM 275 (341)
T ss_pred HHHHhCCCcHHHHHHHHHHhhcCCCCCCcHH
Confidence 2 445789999999999888777777763
No 408
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.94 E-value=1.8e-25 Score=183.58 Aligned_cols=252 Identities=21% Similarity=0.285 Sum_probs=204.4
Q ss_pred CCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcC-CCCCeeeeeEEEEeCCeEEEE
Q 022401 19 MHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSL-RHPNIVRFKEVILTPTHLAIV 97 (298)
Q Consensus 19 ~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 97 (298)
....-.|+++++||+|.||+.+.+.+-.++.+||||. +.-.....+++.|....+.| ..++|...+.+.....+-.+|
T Consensus 24 ~~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKf-EPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLV 102 (449)
T KOG1165|consen 24 LMVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKF-EPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILV 102 (449)
T ss_pred eEecccceeccccccCcceeeecccccccCceEEEEe-ccccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhh
Confidence 3445679999999999999999999999999999995 44445568889999999888 569999998887777777899
Q ss_pred EeccCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCC---CEEEeecCccccccC
Q 022401 98 MEYASGGELFERICNAG-RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAP---RLKICDFGYSKSSVL 173 (298)
Q Consensus 98 ~~~~~~~sL~~~l~~~~-~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~---~~~l~d~~~~~~~~~ 173 (298)
++.. |-||.+++.--+ .++..++..++.|++.-++++|++++|+|||||+|.||...+.. .+.++|||++.....
T Consensus 103 idLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrD 181 (449)
T KOG1165|consen 103 IDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRD 181 (449)
T ss_pred hhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcC
Confidence 9988 679999886544 69999999999999999999999999999999999999754443 489999999963322
Q ss_pred --------CCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCC
Q 022401 174 --------HSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVP 245 (298)
Q Consensus 174 --------~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 245 (298)
+.......|+.+|||--.+.+...+.+ .|+-|||=++.+++-|.+||++... +...+..++|.......+
T Consensus 182 p~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRR-DDLEaLGHvFmYFLRGsLPWQGLKA-~tnK~kYeKIGe~Kr~T~ 259 (449)
T KOG1165|consen 182 PKTKQHIPYREHKSLSGTARYMSINTHLGREQSRR-DDLEALGHVFMYFLRGSLPWQGLKA-DTNKEKYEKIGETKRSTP 259 (449)
T ss_pred ccccccCccccccccccceeeeEeeccccchhhhh-hhHHHhhhhhhhhccCCCccccccC-cchHHHHHHhccccccCC
Confidence 334456679999999999988888777 9999999999999999999999876 444666667665544333
Q ss_pred C---CCCCCHHHHHHHHHhhhhCCCCcccccc
Q 022401 246 D---TNPISQECRDLISRIFVADPAAVSIFFF 274 (298)
Q Consensus 246 ~---~~~~~~~l~~li~~~l~~dp~~Rps~~~ 274 (298)
. ..+.|.++..-++-.-..+=.+-|.+.-
T Consensus 260 i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdy 291 (449)
T KOG1165|consen 260 IEVLCEGFPEEFATYLRYVRRLDFFETPDYDY 291 (449)
T ss_pred HHHHHhcCHHHHHHHHHHHHhcCcccCCCHHH
Confidence 2 2347788888888777777777777643
No 409
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.92 E-value=3.4e-26 Score=210.42 Aligned_cols=256 Identities=30% Similarity=0.472 Sum_probs=194.0
Q ss_pred eEEeeeccCCeEEEEEEEEccCCcEEEEEEeec---CC----cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEE
Q 022401 26 DFVRDIGSGNFGVARLMRDKVTKELVAVKYIER---GD----KIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 26 ~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~---~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
.....+|.|++|.++.+........+..|.+.. .. .....+..|.-+-.+++|+|++..+..+.+.....-.|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 567889999999888888776666566664431 11 11122456777778889999988877776665555559
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCC-
Q 022401 99 EYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP- 177 (298)
Q Consensus 99 ~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~- 177 (298)
||+++ +|..++.....++..++--+++|++.|++|+|+.|+.|+|+|++|+++..++. +|++|||.+.........
T Consensus 401 E~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~--lki~Dfg~~~vf~~~~e~~ 477 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGI--LKIIDFGAASVFRYPWEKN 477 (601)
T ss_pred hcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCc--eEEeecCcceeeccCcchh
Confidence 99999 99999988888999999999999999999999999999999999999999987 999999987644333322
Q ss_pred ----CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHH---HHhhcCCCCCCCCCC
Q 022401 178 ----KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQ---RILSVQYSVPDTNPI 250 (298)
Q Consensus 178 ----~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 250 (298)
....|+.-|+|||.+.+..|++...||||.|+++..|.+|+.||......+.-..... ..............+
T Consensus 478 ~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 557 (601)
T KOG0590|consen 478 IHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLL 557 (601)
T ss_pred hhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHhc
Confidence 3345778899999999999999999999999999999999999988765443210000 000000111122247
Q ss_pred CHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 251 SQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 251 ~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
|.+-+.+|.+||+.||.+|.|+.+|+ +-+|+++.
T Consensus 558 p~~~~~~~~~~l~~~P~~R~ti~~i~--------~d~W~~~i 591 (601)
T KOG0590|consen 558 PRETRIIIYRMLQLDPTKRITIEQIL--------NDEWIRSI 591 (601)
T ss_pred hhhHHHHHHHHccCChhheecHHHHh--------hChHhhhc
Confidence 88999999999999999999986665 55666544
No 410
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.92 E-value=1.4e-22 Score=174.99 Aligned_cols=250 Identities=36% Similarity=0.578 Sum_probs=196.1
Q ss_pred eeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc----chHHHHHHHHHHhcCCCC-CeeeeeEEEEeCCeEEEEEe
Q 022401 25 YDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK----IDENVQREIINHRSLRHP-NIVRFKEVILTPTHLAIVME 99 (298)
Q Consensus 25 y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~----~~~~~~~e~~~l~~l~h~-~i~~~~~~~~~~~~~~lv~~ 99 (298)
|.+.+.||.|+|+.||.+.+. ..+++|.+..... ....+.+|..++..+.|+ +++++.+.+......+++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence 789999999999999999997 6789998876433 345688899999999988 79999999977778899999
Q ss_pred ccCCCCHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC-
Q 022401 100 YASGGELFERICNAG---RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS- 175 (298)
Q Consensus 100 ~~~~~sL~~~l~~~~---~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~- 175 (298)
++.++++.+.+.... .++......++.+++.++.++|+.+++|+|++|+||+++..+. .+++.|||.+.......
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~-~~~l~dfg~~~~~~~~~~ 157 (384)
T COG0515 79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGR-VVKLIDFGLAKLLPDPGS 157 (384)
T ss_pred cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCC-eEEEeccCcceecCCCCc
Confidence 999999997776665 7899999999999999999999999999999999999987772 28999999886333222
Q ss_pred ------CCCCCCCCCcccCccccccc--cCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCC-C--
Q 022401 176 ------QPKSTVGTPAYIAPEVLLRH--EYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYS-V-- 244 (298)
Q Consensus 176 ------~~~~~~~~~~~~aPE~~~~~--~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~-- 244 (298)
......++..|++||...+. .......|+|++|++++++++|..||...............+...... .
T Consensus 158 ~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (384)
T COG0515 158 TSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLAS 237 (384)
T ss_pred cccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCccccc
Confidence 23566789999999998874 344555999999999999999999977765421122222222222222 1
Q ss_pred CCCCCC----CHHHHHHHHHhhhhCCCCcccccccchh
Q 022401 245 PDTNPI----SQECRDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 245 ~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
...... ...+.+++..++..+|..|.+..+....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 238 PLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred ccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 111111 2579999999999999999988665543
No 411
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.91 E-value=5.3e-25 Score=176.55 Aligned_cols=245 Identities=20% Similarity=0.311 Sum_probs=198.2
Q ss_pred CCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeec---CCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEE
Q 022401 20 HDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIER---GDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAI 96 (298)
Q Consensus 20 ~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 96 (298)
++.++..++.+|.+.-.|..|+++++++ -++.|++.. ..+....|..|.-.++.+.||||+++++.|..+-.+.+
T Consensus 187 id~~~lnl~tkl~e~hsgelwrgrwqgn--divakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~ 264 (448)
T KOG0195|consen 187 IDVSSLNLITKLAESHSGELWRGRWQGN--DIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVI 264 (448)
T ss_pred cchhhhhhhhhhccCCCcccccccccCc--chhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceE
Confidence 4556677888999999999999999754 466676543 44555678888888999999999999999999999999
Q ss_pred EEeccCCCCHHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHhhcC--cEEecCCCCceEeeCCCCCCEEEeecCcccccc
Q 022401 97 VMEYASGGELFERICNAGR--FSEDEARFFFQQLISGVSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 172 (298)
Q Consensus 97 v~~~~~~~sL~~~l~~~~~--~~~~~~~~i~~~l~~~l~~Lh~~~--i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~ 172 (298)
+..|++.+||...++++.. .+-.+..+++.++++|+.|||+.. +.-.-|+..+|++|.+-..++-.+|-.++.
T Consensus 265 isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsf--- 341 (448)
T KOG0195|consen 265 ISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSF--- 341 (448)
T ss_pred eeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeee---
Confidence 9999999999999987654 678899999999999999999865 555678899999999888777667655433
Q ss_pred CCCCCCCCCCCCcccCccccccccCC--CCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCC
Q 022401 173 LHSQPKSTVGTPAYIAPEVLLRHEYD--GKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPI 250 (298)
Q Consensus 173 ~~~~~~~~~~~~~~~aPE~~~~~~~~--~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (298)
+.....-+|.|++||.++.+..+ .+++|+|||++++||+.|...||.....-+ --.++.-...+...++..
T Consensus 342 ---qe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspme----cgmkialeglrv~ippgi 414 (448)
T KOG0195|consen 342 ---QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPME----CGMKIALEGLRVHIPPGI 414 (448)
T ss_pred ---eccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchh----hhhhhhhccccccCCCCc
Confidence 22334457889999999877654 445999999999999999999998876532 222334445566677778
Q ss_pred CHHHHHHHHHhhhhCCCCcccccccc
Q 022401 251 SQECRDLISRIFVADPAAVSIFFFPL 276 (298)
Q Consensus 251 ~~~l~~li~~~l~~dp~~Rps~~~~l 276 (298)
+.....++.-|++.||.+||.+..++
T Consensus 415 s~hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 415 SRHMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred cHHHHHHHHHHhcCCCCcCCCcceeh
Confidence 99999999999999999999998776
No 412
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.91 E-value=1.1e-23 Score=182.63 Aligned_cols=164 Identities=16% Similarity=0.101 Sum_probs=125.3
Q ss_pred CCCCCCeeEEeeeccCCeEEEEEEEEcc-CCcEEEEEEeecC------CcchHHHHHHHHHHhcCCCCCeee-eeEEEEe
Q 022401 19 MHDSDRYDFVRDIGSGNFGVARLMRDKV-TKELVAVKYIERG------DKIDENVQREIINHRSLRHPNIVR-FKEVILT 90 (298)
Q Consensus 19 ~~~~~~y~~~~~lg~g~~~~vy~~~~~~-~~~~~aiK~~~~~------~~~~~~~~~e~~~l~~l~h~~i~~-~~~~~~~ 90 (298)
..-.++|++.+.||+|+||.||+|.+.. +++.+|+|+.... ......+.+|+.++++++|+|+++ +++
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---- 89 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---- 89 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE----
Confidence 3456789999999999999999999875 6777899986532 112456889999999999999985 433
Q ss_pred CCeEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecC-CCCceEeeCCCCCCEEEeecCccc
Q 022401 91 PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDL-KLENTLLDGSPAPRLKICDFGYSK 169 (298)
Q Consensus 91 ~~~~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl-~p~nilv~~~~~~~~~l~d~~~~~ 169 (298)
....++||||++|++|.. .. +.. ...++.+++.+|.|||+.|++|||| ||+||+++.++. ++|+|||++.
T Consensus 90 ~~~~~LVmE~~~G~~L~~-~~---~~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~--ikLiDFGlA~ 160 (365)
T PRK09188 90 TGKDGLVRGWTEGVPLHL-AR---PHG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGE--AAVIDFQLAS 160 (365)
T ss_pred cCCcEEEEEccCCCCHHH-hC---ccc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCC--EEEEECccce
Confidence 245799999999999963 21 111 1467889999999999999999999 999999987776 9999999987
Q ss_pred cccCCCCC---------CCCCCCCcccCccccccc
Q 022401 170 SSVLHSQP---------KSTVGTPAYIAPEVLLRH 195 (298)
Q Consensus 170 ~~~~~~~~---------~~~~~~~~~~aPE~~~~~ 195 (298)
........ ....++..|.+||.+...
T Consensus 161 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 161 VFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred ecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 44332211 122356678888876543
No 413
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.90 E-value=8.2e-25 Score=193.56 Aligned_cols=245 Identities=27% Similarity=0.429 Sum_probs=200.5
Q ss_pred eeccCCeEEEEEEEE---ccCCcEEEEEEeecCC---cchHHHHHHHHHHhcCC-CCCeeeeeEEEEeCCeEEEEEeccC
Q 022401 30 DIGSGNFGVARLMRD---KVTKELVAVKYIERGD---KIDENVQREIINHRSLR-HPNIVRFKEVILTPTHLAIVMEYAS 102 (298)
Q Consensus 30 ~lg~g~~~~vy~~~~---~~~~~~~aiK~~~~~~---~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~~~~~ 102 (298)
++|+|.+|.|++++. ...+..|++|+..+.. +.......|..++...+ ||.+++++..+..+...+++.++..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 478999999887764 3457788999876532 11223445667777776 9999999999999999999999999
Q ss_pred CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCCCCCCC
Q 022401 103 GGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVG 182 (298)
Q Consensus 103 ~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 182 (298)
++.+...+.+...+++.....+...++.+++++|+.+++|+|+|++||+++.+|+ +++.|||.++........ +|
T Consensus 81 gg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Gh--i~~tdfglske~v~~~~~---cg 155 (612)
T KOG0603|consen 81 GGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGH--IKLTDFGLSKEAVKEKIA---CG 155 (612)
T ss_pred cchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCc--cccCCchhhhHhHhhhhc---cc
Confidence 9999999988888999999999999999999999999999999999999999998 999999988754433332 88
Q ss_pred CCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhh
Q 022401 183 TPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIF 262 (298)
Q Consensus 183 ~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 262 (298)
+..|+|||+.. +... ++|-||+|++++++++|..||.. +....|....+..|. .++.+.++++..++
T Consensus 156 t~eymApEI~~--gh~~-a~D~ws~gvl~felltg~~pf~~--------~~~~~Il~~~~~~p~--~l~~~a~~~~~~l~ 222 (612)
T KOG0603|consen 156 TYEYRAPEIIN--GHLS-AADWWSFGVLAFELLTGTLPFGG--------DTMKRILKAELEMPR--ELSAEARSLFRQLF 222 (612)
T ss_pred chhhhhhHhhh--ccCC-cccchhhhhhHHHHhhCCCCCch--------HHHHHHhhhccCCch--hhhHHHHHHHHHHH
Confidence 99999999987 3333 48999999999999999999998 445555555554443 37899999999999
Q ss_pred hhCCCCcccccccchhhhHHHhhhhhhhhhhhh
Q 022401 263 VADPAAVSIFFFPLNMSCLLLFSFVWMFDATEN 295 (298)
Q Consensus 263 ~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~~~~ 295 (298)
..+|..|.-..-- ...+..+|+|++...+|
T Consensus 223 ~r~p~nrLg~~~~---~~~eik~h~f~~~i~~~ 252 (612)
T KOG0603|consen 223 KRNPENRLGAGPD---GVDEIKQHEFFQSIDWN 252 (612)
T ss_pred hhCHHHHhccCcc---hhHHHhccchheeeeHh
Confidence 9999999866321 24788999999987765
No 414
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.90 E-value=5.8e-23 Score=171.03 Aligned_cols=231 Identities=21% Similarity=0.223 Sum_probs=148.6
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc----chHHHHHHHHHHhcCC----------CCCeeeeeEEEE
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK----IDENVQREIINHRSLR----------HPNIVRFKEVIL 89 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~----~~~~~~~e~~~l~~l~----------h~~i~~~~~~~~ 89 (298)
....++.||.|+++.||.+.+..+++.+++|++....+ ..+++++|......+. |-.++...+...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 47889999999999999999999999999999875432 2345666665555432 223444444432
Q ss_pred e------------CCe-----EEEEEeccCCCCHHHHHH---hCCCC----CHHHHHHHHHHHHHHHHHHhhcCcEEecC
Q 022401 90 T------------PTH-----LAIVMEYASGGELFERIC---NAGRF----SEDEARFFFQQLISGVSYCHAMQVCHRDL 145 (298)
Q Consensus 90 ~------------~~~-----~~lv~~~~~~~sL~~~l~---~~~~~----~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl 145 (298)
. .+. .+++|+.+ .++|..++. ..... ...-...+..|+++.+++||+.|++|+||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi 171 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDI 171 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEeccc
Confidence 1 112 36778877 457877753 22222 22233445689999999999999999999
Q ss_pred CCCceEeeCCCCCCEEEeecCccccccCCCCCCCCCCCCcccCccccccc-------cCCCCccchHHHHHHHHHHHhCC
Q 022401 146 KLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRH-------EYDGKIADVWSCGVTLYVMLVGG 218 (298)
Q Consensus 146 ~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-------~~~~~~~Di~slG~ll~~l~~g~ 218 (298)
+|+|++++.+|. ++|+||+...+....... ...+..|.+||..... ...+.+.|.|+||+++|.+.++.
T Consensus 172 ~~~nfll~~~G~--v~Lg~F~~~~r~g~~~~~--~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~ 247 (288)
T PF14531_consen 172 KPENFLLDQDGG--VFLGDFSSLVRAGTRYRC--SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGR 247 (288)
T ss_dssp SGGGEEE-TTS---EEE--GGGEEETTEEEEG--GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS
T ss_pred ceeeEEEcCCCC--EEEcChHHHeecCceeec--cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHcc
Confidence 999999999998 999999876543332221 3445778889865432 11233489999999999999999
Q ss_pred CCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCc
Q 022401 219 YPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIFVADPAAV 269 (298)
Q Consensus 219 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R 269 (298)
.||........ ....+....++|+.++++|+.+|+.||++|
T Consensus 248 lPf~~~~~~~~----------~~~~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 248 LPFGLSSPEAD----------PEWDFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp -STCCCGGGST----------SGGGGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred CCCCCCCcccc----------ccccchhcCCcCHHHHHHHHHHccCCcccC
Confidence 99987543211 111233334689999999999999999988
No 415
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.88 E-value=1.4e-22 Score=164.04 Aligned_cols=170 Identities=15% Similarity=0.160 Sum_probs=128.4
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHH----------HHHHHHHHhcCCCCCeeeeeEEEEe
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDEN----------VQREIINHRSLRHPNIVRFKEVILT 90 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~----------~~~e~~~l~~l~h~~i~~~~~~~~~ 90 (298)
..++|++.+.+|.|+||.||.+.. ++..+|+|.+.......+. +.+|+..+.++.|++|..+.+++..
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~ 106 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL 106 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence 358999999999999999999766 3557999998754322222 5788889999999999999988664
Q ss_pred C--------CeEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEE
Q 022401 91 P--------THLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKI 162 (298)
Q Consensus 91 ~--------~~~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l 162 (298)
. ...+++|||++|.+|.+... +++ ....+++.++..+|+.|++|||++|.|+++++++ ++|
T Consensus 107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~----~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g---i~l 175 (232)
T PRK10359 107 AERKTLRYAHTYIMLIEYIEGVELNDMPE----ISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG---LRI 175 (232)
T ss_pred cccccccccCCeEEEEEEECCccHHHhhh----ccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC---EEE
Confidence 3 35789999999999977632 233 2466999999999999999999999999998766 899
Q ss_pred eecCccccccCCCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHH
Q 022401 163 CDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVML 215 (298)
Q Consensus 163 ~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~ 215 (298)
+|||.......... . ........+..+ +|+|+||+.+..+.
T Consensus 176 iDfg~~~~~~e~~a------~-----d~~vler~y~~~-~di~~lg~~~~~~~ 216 (232)
T PRK10359 176 IDLSGKRCTAQRKA------K-----DRIDLERHYGIK-NEIKDLGYYLLIYK 216 (232)
T ss_pred EECCCcccccchhh------H-----HHHHHHhHhccc-ccccceeEeehHHH
Confidence 99997643311110 0 012333445544 99999999876654
No 416
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.88 E-value=2.3e-22 Score=160.55 Aligned_cols=137 Identities=20% Similarity=0.181 Sum_probs=107.7
Q ss_pred EeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcc----------hH-----------------HHHHHHHHHhcCCCCC
Q 022401 28 VRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKI----------DE-----------------NVQREIINHRSLRHPN 80 (298)
Q Consensus 28 ~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~----------~~-----------------~~~~e~~~l~~l~h~~ 80 (298)
...||+|++|.||.|.+. +|+.||+|++..+... .. ...+|..++.++.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 468999999999999997 8999999998754211 01 1234889999998777
Q ss_pred eeeeeEEEEeCCeEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHH-hhcCcEEecCCCCceEeeCCCCCC
Q 022401 81 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYC-HAMQVCHRDLKLENTLLDGSPAPR 159 (298)
Q Consensus 81 i~~~~~~~~~~~~~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~L-h~~~i~H~dl~p~nilv~~~~~~~ 159 (298)
+.....+... ..++||||++++++.........++..++..++.|++.+|.++ |+.|++|+||||+||+++. +.
T Consensus 81 v~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~~-~~-- 155 (190)
T cd05147 81 IPCPEPILLK--SHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYHD-GK-- 155 (190)
T ss_pred CCCCcEEEec--CCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEEC-Cc--
Confidence 6443333222 2379999999877765544556789999999999999999999 7999999999999999984 44
Q ss_pred EEEeecCcccc
Q 022401 160 LKICDFGYSKS 170 (298)
Q Consensus 160 ~~l~d~~~~~~ 170 (298)
++|+|||++..
T Consensus 156 v~LiDFG~a~~ 166 (190)
T cd05147 156 LYIIDVSQSVE 166 (190)
T ss_pred EEEEEcccccc
Confidence 99999998763
No 417
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.88 E-value=3.4e-23 Score=192.57 Aligned_cols=237 Identities=24% Similarity=0.350 Sum_probs=178.4
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcc--hHHHH---HHHHHHhcCCCCCeeeeeEEEEeCCeEEEEE
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKI--DENVQ---REIINHRSLRHPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~---~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (298)
.|...+.||++.|=.|.+|++.. | .+++|++.+.... ...+. .+++ ....++||.+++.-..+.++..|+|.
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~e-G-~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvR 100 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDRE-G-LVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVR 100 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCC-c-eEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHH
Confidence 78999999999999999999863 3 4999998765322 23333 3333 44458999999999887888889999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCC-
Q 022401 99 EYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP- 177 (298)
Q Consensus 99 ~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~- 177 (298)
+|... +|.+.++.++-+..-+.+.|+.|++.|+..+|+.|++|||||.+|||+++=.. +.|.||............
T Consensus 101 qyvkh-nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW--~~LtDFAsFKPtYLPeDNP 177 (1431)
T KOG1240|consen 101 QYVKH-NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNW--LYLTDFASFKPTYLPEDNP 177 (1431)
T ss_pred HHHhh-hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeech--hhhhcccccCCccCCCCCc
Confidence 99854 89999998888899999999999999999999999999999999999987766 999999865422221111
Q ss_pred -------CCCCCCCcccCcccccccc---------C-CCCccchHHHHHHHHHHHh-CCCCCCCC-------CCchhHHH
Q 022401 178 -------KSTVGTPAYIAPEVLLRHE---------Y-DGKIADVWSCGVTLYVMLV-GGYPFEDP-------DEPKDFRK 232 (298)
Q Consensus 178 -------~~~~~~~~~~aPE~~~~~~---------~-~~~~~Di~slG~ll~~l~~-g~~pf~~~-------~~~~~~~~ 232 (298)
.+......|+|||.+.... + -.++-||||+||++.|+++ |.+||.-. .+......
T Consensus 178 adf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~~~~~e~ 257 (1431)
T KOG1240|consen 178 ADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGNADDPEQ 257 (1431)
T ss_pred ccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccCccCHHH
Confidence 2223455799999876532 1 2344799999999999998 67787531 00111111
Q ss_pred HHHHHhhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchh
Q 022401 233 TIQRILSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
.+.+ . -+..++.+|..|++.||.+|.++.+.|..
T Consensus 258 ~Le~----------I--ed~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 258 LLEK----------I--EDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred HHHh----------C--cCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 1111 1 13469999999999999999999998876
No 418
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.87 E-value=2.3e-21 Score=155.29 Aligned_cols=139 Identities=18% Similarity=0.139 Sum_probs=109.6
Q ss_pred EEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcc---------------------------hHHHHHHHHHHhcCCCC
Q 022401 27 FVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKI---------------------------DENVQREIINHRSLRHP 79 (298)
Q Consensus 27 ~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~---------------------------~~~~~~e~~~l~~l~h~ 79 (298)
+.+.||+|++|.||.|.+. +|+.||+|++..+... ......|...+.++.++
T Consensus 1 ~~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 79 (190)
T cd05145 1 INGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA 79 (190)
T ss_pred CCceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 3578999999999999987 8999999998754211 11235788889999998
Q ss_pred CeeeeeEEEEeCCeEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhh-cCcEEecCCCCceEeeCCCCC
Q 022401 80 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA-MQVCHRDLKLENTLLDGSPAP 158 (298)
Q Consensus 80 ~i~~~~~~~~~~~~~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~-~~i~H~dl~p~nilv~~~~~~ 158 (298)
++.....+.... .++||||++|+++.........++......++.+++.++.++|+ .|++|+||||+||+++ ++.
T Consensus 80 ~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~- 155 (190)
T cd05145 80 GVPVPEPILLKK--NVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGK- 155 (190)
T ss_pred CCCCceEEEecC--CEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCC-
Confidence 875544443332 47999999887554433344567888999999999999999999 9999999999999998 555
Q ss_pred CEEEeecCccccc
Q 022401 159 RLKICDFGYSKSS 171 (298)
Q Consensus 159 ~~~l~d~~~~~~~ 171 (298)
++|+|||++...
T Consensus 156 -~~liDFG~a~~~ 167 (190)
T cd05145 156 -PYIIDVSQAVEL 167 (190)
T ss_pred -EEEEEcccceec
Confidence 999999988643
No 419
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.87 E-value=2.5e-21 Score=153.55 Aligned_cols=186 Identities=16% Similarity=0.145 Sum_probs=138.9
Q ss_pred eeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchH-----HHHHHHHHHhcCC-CCCeeeeeEEEEeCCeEEEEE
Q 022401 25 YDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDE-----NVQREIINHRSLR-HPNIVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 25 y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~-----~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 98 (298)
..+...|+.|+||+||.+.. .+..++.+.+........ .+.+|++++++++ ++++.+++++ +..++++
T Consensus 4 ~~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvm 77 (218)
T PRK12274 4 PAVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDR 77 (218)
T ss_pred cccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEE
Confidence 45678999999999997766 567788787776655433 5789999999995 5889999886 3468999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecC-CCCceEeeCCCCCCEEEeecCccccccCCCCC
Q 022401 99 EYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDL-KLENTLLDGSPAPRLKICDFGYSKSSVLHSQP 177 (298)
Q Consensus 99 ~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl-~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~ 177 (298)
+|+.|.+|...... ....++.+++.++.++|+.|++|+|| +|+||+++.++. ++|+|||++.........
T Consensus 78 eyI~G~~L~~~~~~-------~~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~--i~LIDFG~A~~~~~~~~~ 148 (218)
T PRK12274 78 SYLAGAAMYQRPPR-------GDLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGS--PAVIDFQLAVRGNPRARW 148 (218)
T ss_pred eeecCccHHhhhhh-------hhHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCC--EEEEECCCceecCCcchH
Confidence 99999888654321 12357789999999999999999999 799999988776 999999998744332210
Q ss_pred --------------CCCCCCCcccCccccccc-cCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 022401 178 --------------KSTVGTPAYIAPEVLLRH-EYDGKIADVWSCGVTLYVMLVGGYPFEDPD 225 (298)
Q Consensus 178 --------------~~~~~~~~~~aPE~~~~~-~~~~~~~Di~slG~ll~~l~~g~~pf~~~~ 225 (298)
.....++.+++|+...-- ..+-...+.++.|+-+|.++|+..|+...+
T Consensus 149 ~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 149 MRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 001146667777754322 222233688999999999999998876644
No 420
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.87 E-value=2.5e-21 Score=162.98 Aligned_cols=195 Identities=27% Similarity=0.366 Sum_probs=145.6
Q ss_pred CCCCeeeeeEEEEe---------------------------CCeEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHH
Q 022401 77 RHPNIVRFKEVILT---------------------------PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLI 129 (298)
Q Consensus 77 ~h~~i~~~~~~~~~---------------------------~~~~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~ 129 (298)
+||||+.+.+.|.+ +..+|+||..++. +|..++-.+ ..+.....-++.|++
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~-~~s~r~~~~~laQlL 351 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTR-HRSYRTGRVILAQLL 351 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcC-CCchHHHHHHHHHHH
Confidence 59999999888754 3468999999855 898888544 447778888999999
Q ss_pred HHHHHHhhcCcEEecCCCCceEe--eCCCCCCEEEeecCccccccC-------CCCCCCCCCCCcccCcccccccc----
Q 022401 130 SGVSYCHAMQVCHRDLKLENTLL--DGSPAPRLKICDFGYSKSSVL-------HSQPKSTVGTPAYIAPEVLLRHE---- 196 (298)
Q Consensus 130 ~~l~~Lh~~~i~H~dl~p~nilv--~~~~~~~~~l~d~~~~~~~~~-------~~~~~~~~~~~~~~aPE~~~~~~---- 196 (298)
+|+.|||++|+.|+|+|.+||++ ++|+.+.+++.|||+|-.... .+..-...|+...+|||+...-+
T Consensus 352 Eav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~a 431 (598)
T KOG4158|consen 352 EAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNA 431 (598)
T ss_pred HHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCce
Confidence 99999999999999999999999 667777899999998742222 22223344677789999875432
Q ss_pred -CCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCccccccc
Q 022401 197 -YDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFP 275 (298)
Q Consensus 197 -~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~ 275 (298)
.+..++|.|+.|.+.||+++...||....+...-... ..+.+. .+.+..+|+.+++++..+|+.||.+|++..-+
T Consensus 432 vvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~---Yqe~qL-Palp~~vpp~~rqlV~~lL~r~pskRvsp~iA 507 (598)
T KOG4158|consen 432 VVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRT---YQESQL-PALPSRVPPVARQLVFDLLKRDPSKRVSPNIA 507 (598)
T ss_pred eeccchhhhhhhhhhHHHHhccCCcccccchheechhh---hhhhhC-CCCcccCChHHHHHHHHHhcCCccccCCccHH
Confidence 2234599999999999999999999885532111111 111111 23345589999999999999999999998544
Q ss_pred ch
Q 022401 276 LN 277 (298)
Q Consensus 276 l~ 277 (298)
-+
T Consensus 508 AN 509 (598)
T KOG4158|consen 508 AN 509 (598)
T ss_pred Hh
Confidence 43
No 421
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.84 E-value=9.2e-21 Score=167.57 Aligned_cols=203 Identities=23% Similarity=0.287 Sum_probs=157.6
Q ss_pred HhcCCCCCeeeeeEEEEeCCeEEEEEeccCCCCHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHhhcCc-EEecCCCCce
Q 022401 73 HRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQV-CHRDLKLENT 150 (298)
Q Consensus 73 l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~~~sL~~~l~~-~~~~~~~~~~~i~~~l~~~l~~Lh~~~i-~H~dl~p~ni 150 (298)
|+.+.|.|+.+++|.+.++...++|.++|.-|+|.+.+.. ...++......++++++.|+.|||+..+ .|+.+++.|.
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nC 80 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNC 80 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccc
Confidence 3568999999999999999999999999999999999987 4468888999999999999999997765 9999999999
Q ss_pred EeeCCCCCCEEEeecCccccccCC---CCCCCCCCCCcccCccccccccC------CCCccchHHHHHHHHHHHhCCCCC
Q 022401 151 LLDGSPAPRLKICDFGYSKSSVLH---SQPKSTVGTPAYIAPEVLLRHEY------DGKIADVWSCGVTLYVMLVGGYPF 221 (298)
Q Consensus 151 lv~~~~~~~~~l~d~~~~~~~~~~---~~~~~~~~~~~~~aPE~~~~~~~------~~~~~Di~slG~ll~~l~~g~~pf 221 (298)
+++.... +|+.|||+....... ...........|.|||.+..... .+++.|+||+|++++|+++...||
T Consensus 81 lvd~~w~--lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~ 158 (484)
T KOG1023|consen 81 LVDSRWV--LKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPF 158 (484)
T ss_pred eeeeeEE--EEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcc
Confidence 9998887 999999986543221 11111123456999999876421 244599999999999999999999
Q ss_pred CCCCCchhHHHHHHHHhh-cC----CCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccch
Q 022401 222 EDPDEPKDFRKTIQRILS-VQ----YSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLN 277 (298)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~ 277 (298)
..........+.+..+.. +. +........++++..++.+||..+|..||++.++-.
T Consensus 159 ~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~ 219 (484)
T KOG1023|consen 159 DLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRS 219 (484)
T ss_pred ccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHh
Confidence 886544432444444333 11 122222246678999999999999999999977654
No 422
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.84 E-value=9.6e-21 Score=176.10 Aligned_cols=229 Identities=29% Similarity=0.469 Sum_probs=168.2
Q ss_pred CCCCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEE
Q 022401 17 PIMHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAI 96 (298)
Q Consensus 17 ~~~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 96 (298)
...+..++|..++.+..|++|.||.++++.+.+.+|+| +.++... .++ ++.....|.++
T Consensus 77 ~~~p~e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~li---lRn---ilt~a~npfvv-------------- 135 (1205)
T KOG0606|consen 77 RRAPSESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNLI---LRN---ILTFAGNPFVV-------------- 135 (1205)
T ss_pred ccCCCccccceeEeeccCCCCceeeeeccccccchhhc-ccccchh---hhc---cccccCCccee--------------
Confidence 34556789999999999999999999999888889995 3333211 111 23333334333
Q ss_pred EEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC-
Q 022401 97 VMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS- 175 (298)
Q Consensus 97 v~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~- 175 (298)
++=...+.+-++++..- +.+++|||+.||+|+|+||+|.+|..-|+ +|+.|||++..+....
T Consensus 136 -------gDc~tllk~~g~lPvdm--------vla~Eylh~ygivhrdlkpdnllIT~mGh--iKlTDfgLsk~GLms~a 198 (1205)
T KOG0606|consen 136 -------GDCATLLKNIGPLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLITSMGH--IKLTDFGLSKKGLMSLA 198 (1205)
T ss_pred -------chhhhhcccCCCCcchh--------hHHhHhhccCCeecCCCCCCcceeeeccc--ccccchhhhhhhhhhcc
Confidence 22234444545544432 78899999999999999999999999998 9999999986332211
Q ss_pred ---------------CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhc
Q 022401 176 ---------------QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSV 240 (298)
Q Consensus 176 ---------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 240 (298)
..+...+++.|.|||++...+|... .|.|++|+++|+++-|..||.+...++.+...+..
T Consensus 199 tnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkp-vdwwamGiIlyeFLVgcvpffGdtpeelfg~visd---- 273 (1205)
T KOG0606|consen 199 TNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKP-VDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISD---- 273 (1205)
T ss_pred chhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCC-ccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhh----
Confidence 1133368999999999988888655 99999999999999999999987665544444443
Q ss_pred CCCCCC-CCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhhh
Q 022401 241 QYSVPD-TNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDAT 293 (298)
Q Consensus 241 ~~~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~~ 293 (298)
...++. ...+++|.+++++++|..+|..|.-.. ..+++-+|+|++..+
T Consensus 274 ~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~-----ga~evk~h~ff~~LD 322 (1205)
T KOG0606|consen 274 DIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTG-----GALEVKQHGFFQLLD 322 (1205)
T ss_pred hccccccCcCCCHHHHHHHHHHHHhChHhhcccc-----hhhhhhhccceeecc
Confidence 333332 233789999999999999999998664 345778899988654
No 423
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.83 E-value=2.1e-20 Score=176.33 Aligned_cols=198 Identities=24% Similarity=0.317 Sum_probs=159.1
Q ss_pred CCCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCC---CCCeeeeeEEEEeCCeE
Q 022401 18 IMHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLR---HPNIVRFKEVILTPTHL 94 (298)
Q Consensus 18 ~~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~ 94 (298)
....+.+|.|-+.+|+|++|.||.|.... |+.+|+|+-....-+. |---.+++.||+ -+.|+.+..+..-.+.-
T Consensus 693 ~~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WE--fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S 769 (974)
T KOG1166|consen 693 FEVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWE--FYICLQVMERLKPQMLPSIMHISSAHVFQNAS 769 (974)
T ss_pred eeecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCcee--eeehHHHHHhhchhhhcchHHHHHHHccCCcc
Confidence 34567899999999999999999999976 9999999766543322 111224444554 35677777777777888
Q ss_pred EEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEee-----CCCCCCEEEeecCccc
Q 022401 95 AIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLD-----GSPAPRLKICDFGYSK 169 (298)
Q Consensus 95 ~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~-----~~~~~~~~l~d~~~~~ 169 (298)
++|.+|.+.|||.++++....+++..+..++.|++..+++||..+||||||||+|.++. +.+..-++|+|||.+.
T Consensus 770 ~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~si 849 (974)
T KOG1166|consen 770 VLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSI 849 (974)
T ss_pred eeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccce
Confidence 89999999999999999888899999999999999999999999999999999999994 2233459999999875
Q ss_pred cccCC---CCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCC
Q 022401 170 SSVLH---SQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGY 219 (298)
Q Consensus 170 ~~~~~---~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~ 219 (298)
..... ..-.....+..+-++|+..+..++.. +|.|.++-+++.|+.|..
T Consensus 850 Dm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq-~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 850 DMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQ-IDYFGLAATVHVMLFGKY 901 (974)
T ss_pred eeeEcCCCcEEeeeeccccchhHHHhcCCCCchh-hhhHHHHHHHHHHHHHHH
Confidence 33222 22244557888999999999999887 999999999999999873
No 424
>smart00090 RIO RIO-like kinase.
Probab=99.81 E-value=2.4e-19 Score=147.92 Aligned_cols=139 Identities=17% Similarity=0.091 Sum_probs=109.9
Q ss_pred CeeEEeeeccCCeEEEEEEE-EccCCcEEEEEEeecCCcc-------------------------hHHHHHHHHHHhcCC
Q 022401 24 RYDFVRDIGSGNFGVARLMR-DKVTKELVAVKYIERGDKI-------------------------DENVQREIINHRSLR 77 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~-~~~~~~~~aiK~~~~~~~~-------------------------~~~~~~e~~~l~~l~ 77 (298)
-|++.+.||+|++|.||.|. +..+|+.||+|++...... ...+..|...+.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 48899999999999999999 6678999999998754210 122457899998886
Q ss_pred CCC--eeeeeEEEEeCCeEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcC-cEEecCCCCceEeeC
Q 022401 78 HPN--IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ-VCHRDLKLENTLLDG 154 (298)
Q Consensus 78 h~~--i~~~~~~~~~~~~~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~-i~H~dl~p~nilv~~ 154 (298)
+.+ +.++++. ...++|||++++.++.............+...++.+++.++.+||+.| ++|+||+|+||+++
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~- 183 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH- 183 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-
Confidence 533 3344432 234799999999888665544556677778899999999999999999 99999999999998
Q ss_pred CCCCCEEEeecCccc
Q 022401 155 SPAPRLKICDFGYSK 169 (298)
Q Consensus 155 ~~~~~~~l~d~~~~~ 169 (298)
++. ++|+|||.+.
T Consensus 184 ~~~--i~LiDFg~a~ 196 (237)
T smart00090 184 DGK--VVIIDVSQSV 196 (237)
T ss_pred CCC--EEEEEChhhh
Confidence 554 9999999765
No 425
>PRK10345 hypothetical protein; Provisional
Probab=99.81 E-value=1e-18 Score=140.87 Aligned_cols=134 Identities=19% Similarity=0.229 Sum_probs=105.3
Q ss_pred EEeeeccCCeEEEEEEEEccCCcEEEEEEeecC-CcchHHHHHHHHHHhcC-----CCCCeeeeeEEEEeCC---eEE-E
Q 022401 27 FVRDIGSGNFGVARLMRDKVTKELVAVKYIERG-DKIDENVQREIINHRSL-----RHPNIVRFKEVILTPT---HLA-I 96 (298)
Q Consensus 27 ~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~-~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~---~~~-l 96 (298)
-.+.||+|++|.||. +..++.. +||+.... ....+.+.+|+.+++.+ .||||++++++++.+. .++ +
T Consensus 6 ~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~ 82 (210)
T PRK10345 6 EQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV 82 (210)
T ss_pred CcceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence 357899999999995 6556655 68887654 23446789999999999 5799999999998874 333 7
Q ss_pred EEec--cCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHH-HHHhhcCcEEecCCCCceEeeCC--CCCCEEEeecC
Q 022401 97 VMEY--ASGGELFERICNAGRFSEDEARFFFQQLISGV-SYCHAMQVCHRDLKLENTLLDGS--PAPRLKICDFG 166 (298)
Q Consensus 97 v~~~--~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l-~~Lh~~~i~H~dl~p~nilv~~~--~~~~~~l~d~~ 166 (298)
|+|| +.+++|.+++.+. .+++. ..++.+++.++ +|||+.+|+|+||||+||+++.. +..+++|+|++
T Consensus 83 I~e~~G~~~~tL~~~l~~~-~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~ 154 (210)
T PRK10345 83 IADFDGKPSITLTEFAEQC-RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNI 154 (210)
T ss_pred EecCCCCcchhHHHHHHcc-cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECC
Confidence 8999 4478999999664 45555 35678888777 99999999999999999999753 33369999954
No 426
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.78 E-value=3.8e-18 Score=139.05 Aligned_cols=132 Identities=22% Similarity=0.215 Sum_probs=110.6
Q ss_pred eeeccCCeEEEEEEEEccCCcEEEEEEeecCCcc---------hHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEe
Q 022401 29 RDIGSGNFGVARLMRDKVTKELVAVKYIERGDKI---------DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVME 99 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~---------~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~ 99 (298)
+.||+|++|.||.+.. .+..+++|........ ...+.+|+.++..+.|+++.....++.+....++++|
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e 79 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVME 79 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEE
Confidence 5789999999999987 5667899976532211 1346689999999999998887778777888899999
Q ss_pred ccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccc
Q 022401 100 YASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK 169 (298)
Q Consensus 100 ~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~ 169 (298)
|++|.+|.+.+..... ....++.+++.++.++|+.|++|+|++|.||+++ ++. ++|+|||.+.
T Consensus 80 ~~~G~~L~~~~~~~~~----~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~--~~liDf~~a~ 142 (211)
T PRK14879 80 YIEGEPLKDLINSNGM----EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGK--IYLIDFGLAE 142 (211)
T ss_pred EeCCcCHHHHHHhccH----HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCC--EEEEECCccc
Confidence 9999999998865432 7889999999999999999999999999999998 444 9999999765
No 427
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.75 E-value=1.2e-17 Score=134.76 Aligned_cols=128 Identities=21% Similarity=0.183 Sum_probs=104.1
Q ss_pred eeccCCeEEEEEEEEccCCcEEEEEEeecCCc---------chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEec
Q 022401 30 DIGSGNFGVARLMRDKVTKELVAVKYIERGDK---------IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY 100 (298)
Q Consensus 30 ~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~---------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~ 100 (298)
.||+|++|.||.+.. ++..+++|....... ....+.+|+.+++.+.++++.....++......++++|+
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 78 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEY 78 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
Confidence 379999999999985 467799998653211 124466899999999988876666666677778899999
Q ss_pred cCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccc
Q 022401 101 ASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK 169 (298)
Q Consensus 101 ~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~ 169 (298)
++|++|.+.+..... .++.+++.+|.+||+.|++|+|++|.||+++ ++. ++++|||++.
T Consensus 79 ~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~--~~liDfg~a~ 137 (199)
T TIGR03724 79 IEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDK--LYLIDFGLGK 137 (199)
T ss_pred ECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCc--EEEEECCCCc
Confidence 999999988754321 7899999999999999999999999999998 554 9999999765
No 428
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.74 E-value=1e-18 Score=152.29 Aligned_cols=178 Identities=22% Similarity=0.275 Sum_probs=132.0
Q ss_pred CeEEEEEeccCCCCHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCcc
Q 022401 92 THLAIVMEYASGGELFERICNAG---RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYS 168 (298)
Q Consensus 92 ~~~~lv~~~~~~~sL~~~l~~~~---~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~ 168 (298)
.++|+.|++|...+|.+++.... ..+....+.++.|++.+++| ++.+|+|++|.||+...+.. ++|+|||+.
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q--~kIgDFgl~ 403 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQ--LKIGDFGLV 403 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchh--hhhhhhhhe
Confidence 46899999999999999996443 36778899999999999999 99999999999999988776 999999987
Q ss_pred ccccCCC-------CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcC
Q 022401 169 KSSVLHS-------QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQ 241 (298)
Q Consensus 169 ~~~~~~~-------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 241 (298)
....... ......++..||+||++.+..+..+ +|||+||++++|++. +|.... .-......+..+.
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~k-vdIyaLGlil~EL~~---~f~T~~---er~~t~~d~r~g~ 476 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEK-VDIYALGLILAELLI---QFSTQF---ERIATLTDIRDGI 476 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhh-cchhhHHHHHHHHHH---HhccHH---HHHHhhhhhhcCC
Confidence 6443333 2234458899999999999999777 999999999999996 121111 1122233333333
Q ss_pred CCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhh
Q 022401 242 YSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMF 290 (298)
Q Consensus 242 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~ 290 (298)
++.....+ .++-..|+.+|+...|.+||++ ....-|+|++
T Consensus 477 ip~~~~~d-~p~e~~ll~~lls~~p~~RP~~--------~~~~~~~~~~ 516 (516)
T KOG1033|consen 477 IPPEFLQD-YPEEYTLLQQLLSPSPEERPSA--------IEVALHEFLQ 516 (516)
T ss_pred CChHHhhc-CcHHHHHHHHhcCCCcccCchH--------HHHhhhhhcC
Confidence 32111111 2455689999999999999944 6666677653
No 429
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.74 E-value=2.1e-17 Score=133.31 Aligned_cols=133 Identities=21% Similarity=0.246 Sum_probs=104.4
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCc-----------------------chHHHHHHHHHHhcCCCCC
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDK-----------------------IDENVQREIINHRSLRHPN 80 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~-----------------------~~~~~~~e~~~l~~l~h~~ 80 (298)
.|.+.+.||+|++|.||.+... +|+.+++|++..+.. .......|..++..+.+++
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 94 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG 94 (198)
T ss_pred hhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC
Confidence 3888999999999999999875 789999998764321 0122566888888887764
Q ss_pred --eeeeeEEEEeCCeEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCC
Q 022401 81 --IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAP 158 (298)
Q Consensus 81 --i~~~~~~~~~~~~~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~ 158 (298)
+...++ ....++++||++|.+|...... .....++.+++.++.++|+.|++|+||+|+||+++.++.
T Consensus 95 i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~- 163 (198)
T cd05144 95 FPVPKPID----WNRHAVVMEYIDGVELYRVRVL------EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEK- 163 (198)
T ss_pred CCCCceee----cCCceEEEEEeCCcchhhcccc------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCc-
Confidence 333333 3455899999999988765421 345678899999999999999999999999999988776
Q ss_pred CEEEeecCccc
Q 022401 159 RLKICDFGYSK 169 (298)
Q Consensus 159 ~~~l~d~~~~~ 169 (298)
++|+|||++.
T Consensus 164 -~~liDfg~~~ 173 (198)
T cd05144 164 -IYIIDWPQMV 173 (198)
T ss_pred -EEEEECCccc
Confidence 9999999875
No 430
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.73 E-value=5.2e-17 Score=149.92 Aligned_cols=135 Identities=20% Similarity=0.122 Sum_probs=108.7
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecC-C--------cchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCe
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERG-D--------KIDENVQREIINHRSLRHPNIVRFKEVILTPTH 93 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~-~--------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 93 (298)
..|...+.||+|+||.||++..... .+++|..... . ...+.+.+|+.+++.++|+++.....+..+...
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~ 410 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE 410 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence 3456689999999999999887543 3444433211 1 112457789999999999999988888777778
Q ss_pred EEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCcccc
Q 022401 94 LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKS 170 (298)
Q Consensus 94 ~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~ 170 (298)
.++|+||+++++|.+.+. ....++.+++.++.+||+.|++|||+||+||+++ ++. ++|+|||++..
T Consensus 411 ~~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~-~~~--~~liDFGla~~ 476 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVR-DDR--LYLIDFGLGKY 476 (535)
T ss_pred CEEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEEE-CCc--EEEEeCccccc
Confidence 899999999999998884 4577899999999999999999999999999994 444 99999998763
No 431
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.70 E-value=2.1e-18 Score=159.14 Aligned_cols=261 Identities=30% Similarity=0.456 Sum_probs=200.6
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEcc-CCcEEEEEEeecCC---cchHHHHHHHHHHhcCC-CCCeeeeeEEEEeCCeEE
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKV-TKELVAVKYIERGD---KIDENVQREIINHRSLR-HPNIVRFKEVILTPTHLA 95 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~-~~~~~aiK~~~~~~---~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 95 (298)
....|.+.+.||+|.++.|-.+.... ....++.|.+.... ...+....|..+...+. |+|++.+++...+.+..+
T Consensus 18 ~~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~ 97 (601)
T KOG0590|consen 18 PNSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYL 97 (601)
T ss_pred ccccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccc
Confidence 46789999999999999988887743 34556666554432 23344556777777776 999999999999999999
Q ss_pred EEEeccCCCCHHHHH-HhCC-CCCHHHHHHHHHHHHHHHHHHh-hcCcEEecCCCCceEeeCCCCCCEEEeecCcccccc
Q 022401 96 IVMEYASGGELFERI-CNAG-RFSEDEARFFFQQLISGVSYCH-AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 172 (298)
Q Consensus 96 lv~~~~~~~sL~~~l-~~~~-~~~~~~~~~i~~~l~~~l~~Lh-~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~ 172 (298)
+..++..|+++...+ .... ..+....-.++.|+..++.|+| ..++.|+|++|+|.+++..+. ..++.||+++....
T Consensus 98 ~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~-~l~~~df~~At~~~ 176 (601)
T KOG0590|consen 98 LSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGS-ALKIADFGLATAYR 176 (601)
T ss_pred cccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCC-cccCCCchhhcccc
Confidence 999999999998888 4444 5777888999999999999999 999999999999999998882 38999999987444
Q ss_pred C-CC---CCCCCCC-CCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCC
Q 022401 173 L-HS---QPKSTVG-TPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDT 247 (298)
Q Consensus 173 ~-~~---~~~~~~~-~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (298)
. .+ ......+ ++.|.+||...+..+..+..|+||.|+++..+++|..|+......+.......... ..+.....
T Consensus 177 ~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~ 255 (601)
T KOG0590|consen 177 NKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNK-GRFTQLPW 255 (601)
T ss_pred ccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccc-cccccCcc
Confidence 4 22 2233446 89999999998877777779999999999999999999987665442211111111 12223344
Q ss_pred CCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhh
Q 022401 248 NPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFD 291 (298)
Q Consensus 248 ~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~ 291 (298)
...+....+++.+++..+|..|.+..+ +-.+||+.+
T Consensus 256 ~~~~~~~~~~l~k~l~~~~~~r~s~~~--------~~~d~~~~~ 291 (601)
T KOG0590|consen 256 NSISDQAHDLLHKILKENPSNRLSIEE--------LKLDNWLSS 291 (601)
T ss_pred ccCChhhhhcccccccCCchhcccccc--------ccccccccc
Confidence 457889999999999999999998744 446677665
No 432
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.67 E-value=2.2e-16 Score=126.12 Aligned_cols=132 Identities=21% Similarity=0.263 Sum_probs=93.1
Q ss_pred EeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHH-------------------------HHHHHHHHhcCCCCC--
Q 022401 28 VRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDEN-------------------------VQREIINHRSLRHPN-- 80 (298)
Q Consensus 28 ~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~-------------------------~~~e~~~l~~l~h~~-- 80 (298)
.+.||+|++|.||.+.+. +++.||+|++......... ...|...+.++.+.+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 578999999999999987 7889999988754321111 123444444443332
Q ss_pred eeeeeEEEEeCCeEEEEEeccCCCCHHH-HHHhCCCCCHHHHHHHHHHHHHHHHHHhh-cCcEEecCCCCceEeeCCCCC
Q 022401 81 IVRFKEVILTPTHLAIVMEYASGGELFE-RICNAGRFSEDEARFFFQQLISGVSYCHA-MQVCHRDLKLENTLLDGSPAP 158 (298)
Q Consensus 81 i~~~~~~~~~~~~~~lv~~~~~~~sL~~-~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~-~~i~H~dl~p~nilv~~~~~~ 158 (298)
+.+.+++ ...++++||++++++.. .+.... . ......++.+++.++.++|+ .|++|+||+|+||+++ ++.
T Consensus 81 ~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~-~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~~- 152 (187)
T cd05119 81 VPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR-L-LEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DGK- 152 (187)
T ss_pred CCceEec----CCCEEEEEEeCCCCccChhhhhhh-h-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CCc-
Confidence 3333332 24589999998843321 111111 1 16678899999999999999 9999999999999999 555
Q ss_pred CEEEeecCccc
Q 022401 159 RLKICDFGYSK 169 (298)
Q Consensus 159 ~~~l~d~~~~~ 169 (298)
++++|||.+.
T Consensus 153 -~~liDfg~a~ 162 (187)
T cd05119 153 -VYIIDVPQAV 162 (187)
T ss_pred -EEEEECcccc
Confidence 9999999875
No 433
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.67 E-value=1.4e-15 Score=125.72 Aligned_cols=132 Identities=20% Similarity=0.237 Sum_probs=100.2
Q ss_pred eeec-cCCeEEEEEEEEccCCcEEEEEEeecCC--------------cchHHHHHHHHHHhcCCCCCe--eeeeEEEEeC
Q 022401 29 RDIG-SGNFGVARLMRDKVTKELVAVKYIERGD--------------KIDENVQREIINHRSLRHPNI--VRFKEVILTP 91 (298)
Q Consensus 29 ~~lg-~g~~~~vy~~~~~~~~~~~aiK~~~~~~--------------~~~~~~~~e~~~l~~l~h~~i--~~~~~~~~~~ 91 (298)
..|| .||.|+||.+... +..+++|.+.... .....+.+|+.++.++.|+++ ...+++....
T Consensus 37 ~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 4566 7888888888774 6679999886421 122457789999999998775 5666654332
Q ss_pred C----eEEEEEeccCC-CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecC
Q 022401 92 T----HLAIVMEYASG-GELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFG 166 (298)
Q Consensus 92 ~----~~~lv~~~~~~-~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~ 166 (298)
. ..++|+++++| .+|.+.+.. .++++.. +.+++.++.+||+.|++|+||+|.||+++.++. ++|+|||
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~-~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~--v~LIDfg 187 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQE-APLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDGK--FWLIDFD 187 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhc-CCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCC--EEEEECC
Confidence 2 23599999987 688888754 3455543 568999999999999999999999999988775 9999999
Q ss_pred ccc
Q 022401 167 YSK 169 (298)
Q Consensus 167 ~~~ 169 (298)
.+.
T Consensus 188 ~~~ 190 (239)
T PRK01723 188 RGE 190 (239)
T ss_pred Ccc
Confidence 765
No 434
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.64 E-value=2e-15 Score=115.91 Aligned_cols=131 Identities=24% Similarity=0.265 Sum_probs=110.0
Q ss_pred EEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCC--CCeeeeeEEEEeCCeEEEEEeccCCC
Q 022401 27 FVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRH--PNIVRFKEVILTPTHLAIVMEYASGG 104 (298)
Q Consensus 27 ~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv~~~~~~~ 104 (298)
+++.|++|.++.||++.... ..+++|....... ...+.+|...++.+++ .++.+++.+....+..+++++++.+.
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK-GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCc-hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 46789999999999999853 6799998866544 5678899999999976 58889988887778899999999887
Q ss_pred CHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhc---CcEEecCCCCceEeeCCCCCCEEEeecCccc
Q 022401 105 ELFERICNAGRFSEDEARFFFQQLISGVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICDFGYSK 169 (298)
Q Consensus 105 sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~---~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~ 169 (298)
++... +......++.+++.++..||.. +++|+|++|.||+++..+. +++.||+.+.
T Consensus 79 ~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~--~~l~Df~~~~ 137 (155)
T cd05120 79 TLDEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKI--LGIIDWEYAG 137 (155)
T ss_pred ecccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcE--EEEEeccccc
Confidence 77543 5566778899999999999984 6999999999999997655 9999999765
No 435
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.60 E-value=3.5e-14 Score=127.65 Aligned_cols=167 Identities=19% Similarity=0.262 Sum_probs=130.8
Q ss_pred EEEEccCCcEEEEEEeecCCc-chHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEeccCCCCHHHHHHhCCCCCHH
Q 022401 41 LMRDKVTKELVAVKYIERGDK-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED 119 (298)
Q Consensus 41 ~~~~~~~~~~~aiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~~~sL~~~l~~~~~~~~~ 119 (298)
.+..+.++.++.+..+..... ..+...+.+.-++.++||||+++++.++.+...|+|+|.+. .|...+.+.+ ..
T Consensus 30 ~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l~---~~ 104 (690)
T KOG1243|consen 30 DGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKELG---KE 104 (690)
T ss_pred ccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHhH---HH
Confidence 455666788888888876554 33557788899999999999999999999999999999984 5677776643 66
Q ss_pred HHHHHHHHHHHHHHHHh-hcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCC-CCCCCCCCcccCccccccccC
Q 022401 120 EARFFFQQLISGVSYCH-AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLLRHEY 197 (298)
Q Consensus 120 ~~~~i~~~l~~~l~~Lh-~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~ 197 (298)
.+...+.||+.||.+|| +.+++|+||.-..|+|+..|+ .||++|.++........ .........|..|+.+....
T Consensus 105 ~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~Ge--WkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s~- 181 (690)
T KOG1243|consen 105 EVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGE--WKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPSE- 181 (690)
T ss_pred HHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCc--EEEeeeEEEeccccCCcccccchhhhcccChhhcCccc-
Confidence 78888999999999997 678999999999999999998 99999998764433332 11222233467777654433
Q ss_pred CCCccchHHHHHHHHHHHhC
Q 022401 198 DGKIADVWSCGVTLYVMLVG 217 (298)
Q Consensus 198 ~~~~~Di~slG~ll~~l~~g 217 (298)
.. .|.|.|||++++++.|
T Consensus 182 -~s-~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 182 -WS-IDSWGLGCLIEELFNG 199 (690)
T ss_pred -cc-hhhhhHHHHHHHHhCc
Confidence 22 6999999999999988
No 436
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.54 E-value=8e-15 Score=121.29 Aligned_cols=195 Identities=16% Similarity=0.254 Sum_probs=136.5
Q ss_pred hcCCCCCeeeeeEEEEeCC-----eEEEEEeccCCCCHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHhhcC--cEE
Q 022401 74 RSLRHPNIVRFKEVILTPT-----HLAIVMEYASGGELFERICNA----GRFSEDEARFFFQQLISGVSYCHAMQ--VCH 142 (298)
Q Consensus 74 ~~l~h~~i~~~~~~~~~~~-----~~~lv~~~~~~~sL~~~l~~~----~~~~~~~~~~i~~~l~~~l~~Lh~~~--i~H 142 (298)
-++-|.||++++.|+.+.+ ...++.+|+..+++..+|.+. ..+......+|+-||+.||.|||+.. ++|
T Consensus 122 lqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppiih 201 (458)
T KOG1266|consen 122 LQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIH 201 (458)
T ss_pred HHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCcccc
Confidence 3456999999999986543 478899999999999998643 34788889999999999999999875 999
Q ss_pred ecCCCCceEeeCCCCCCEEEeecCcccccc-----CCCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhC
Q 022401 143 RDLKLENTLLDGSPAPRLKICDFGYSKSSV-----LHSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVG 217 (298)
Q Consensus 143 ~dl~p~nilv~~~~~~~~~l~d~~~~~~~~-----~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g 217 (298)
+++....|++..+|- +|++--.....-. .........+.++|.+||.=....-+.. +|||++|....+|..+
T Consensus 202 gnlTc~tifiq~ngL--Ikig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a-~dIy~fgmcAlemail 278 (458)
T KOG1266|consen 202 GNLTCDTIFIQHNGL--IKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGA-SDIYKFGMCALEMAIL 278 (458)
T ss_pred CCcchhheeecCCce--EEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccc-hhhhhhhHHHHHHHHh
Confidence 999999999997776 6665433221000 0111233446788999997544444454 9999999999999887
Q ss_pred CCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhh
Q 022401 218 GYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMS 279 (298)
Q Consensus 218 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~ 279 (298)
..--................+-+.. ++.-+.++..|++-.|..||++...++|+
T Consensus 279 Eiq~tnseS~~~~ee~ia~~i~~le--------n~lqr~~i~kcl~~eP~~rp~ar~llfHp 332 (458)
T KOG1266|consen 279 EIQSTNSESKVEVEENIANVIIGLE--------NGLQRGSITKCLEGEPNGRPDARLLLFHP 332 (458)
T ss_pred eeccCCCcceeehhhhhhhheeecc--------CccccCcCcccccCCCCCCcchhhhhcCc
Confidence 7433332222222222222221111 12345689999999999999997777654
No 437
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.53 E-value=8.2e-15 Score=130.23 Aligned_cols=244 Identities=20% Similarity=0.160 Sum_probs=183.2
Q ss_pred CCCCeeEEeeecc--CCeEEEEEEEE--ccCCcEEEEEEeec---CCcchHHHHHHHHHHhcC-CCCCeeeeeEEEEeCC
Q 022401 21 DSDRYDFVRDIGS--GNFGVARLMRD--KVTKELVAVKYIER---GDKIDENVQREIINHRSL-RHPNIVRFKEVILTPT 92 (298)
Q Consensus 21 ~~~~y~~~~~lg~--g~~~~vy~~~~--~~~~~~~aiK~~~~---~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~ 92 (298)
....+.+.+.+|. |.+|.+|.++. ..++..+++|.-.. .......-.+|+...+++ .|++.++....++..+
T Consensus 112 ~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~ 191 (524)
T KOG0601|consen 112 FDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSG 191 (524)
T ss_pred hhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCC
Confidence 3456788889999 99999999998 78889999997432 223333445666666667 4899999888898999
Q ss_pred eEEEEEeccCCCCHHHHHHhCCC-CCHHHHHHHHHHHHH----HHHHHhhcCcEEecCCCCceEeeCC-CCCCEEEeecC
Q 022401 93 HLAIVMEYASGGELFERICNAGR-FSEDEARFFFQQLIS----GVSYCHAMQVCHRDLKLENTLLDGS-PAPRLKICDFG 166 (298)
Q Consensus 93 ~~~lv~~~~~~~sL~~~l~~~~~-~~~~~~~~i~~~l~~----~l~~Lh~~~i~H~dl~p~nilv~~~-~~~~~~l~d~~ 166 (298)
..++-+|.+. .+|..+...-.. ++...++..+.+... |+.++|+.+++|-|++|.||+...+ .. ++++||+
T Consensus 192 ~lfiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s--~~~~df~ 268 (524)
T KOG0601|consen 192 ILFIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTS--CKLTDFG 268 (524)
T ss_pred cceeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccce--eecCCcc
Confidence 9999999995 577777665554 788899999999999 9999999999999999999999888 44 8999999
Q ss_pred ccccccCCCCC------CCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCC--CCchhHHHHHHHHh
Q 022401 167 YSKSSVLHSQP------KSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDP--DEPKDFRKTIQRIL 238 (298)
Q Consensus 167 ~~~~~~~~~~~------~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~--~~~~~~~~~~~~~~ 238 (298)
+.......... ....+...|++||...+ .+ ....|+|++|.++.+..++..++..+ ..+..+....
T Consensus 269 ~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~-~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~---- 342 (524)
T KOG0601|consen 269 LVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LA-TFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY---- 342 (524)
T ss_pred eeEEccCCccccceeeeecCCCCceEeChhhhcc-cc-chHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc----
Confidence 88654443322 22256778999998633 33 34489999999999999888766655 3333222111
Q ss_pred hcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccc
Q 022401 239 SVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPL 276 (298)
Q Consensus 239 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l 276 (298)
.........+.++...+.+|+..+|..|++++.+.
T Consensus 343 ---ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~ 377 (524)
T KOG0601|consen 343 ---IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILT 377 (524)
T ss_pred ---CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHh
Confidence 11222333567888899999999999999874444
No 438
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.45 E-value=5.2e-13 Score=104.82 Aligned_cols=127 Identities=19% Similarity=0.237 Sum_probs=94.5
Q ss_pred EeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCee-eeeEEEEeCCeEEEEEeccCCCCH
Q 022401 28 VRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHPNIV-RFKEVILTPTHLAIVMEYASGGEL 106 (298)
Q Consensus 28 ~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~lv~~~~~~~sL 106 (298)
++.++.|.++.||.++.. +..+++|...........+.+|..+++.+.+.+++ +++.+. ....++|+|+++|.++
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l 78 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSEL 78 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcc
Confidence 467889999999999875 67899998765543334567888999888655544 344432 3345789999999877
Q ss_pred HHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCc-----EEecCCCCceEeeCCCCCCEEEeecCccc
Q 022401 107 FERICNAGRFSEDEARFFFQQLISGVSYCHAMQV-----CHRDLKLENTLLDGSPAPRLKICDFGYSK 169 (298)
Q Consensus 107 ~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i-----~H~dl~p~nilv~~~~~~~~~l~d~~~~~ 169 (298)
... . .....++.+++.++..||+.++ +|+|++|.||+++ ++. ++++||+.+.
T Consensus 79 ~~~----~----~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~--~~liDf~~a~ 135 (170)
T cd05151 79 LTE----D----FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGR--LWLIDWEYAG 135 (170)
T ss_pred ccc----c----ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCe--EEEEeccccc
Confidence 543 0 1123456889999999999885 9999999999998 444 8999999654
No 439
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.41 E-value=4e-12 Score=100.98 Aligned_cols=134 Identities=15% Similarity=0.197 Sum_probs=94.8
Q ss_pred EeeeccCCeEEEEEEEEcc------CCcEEEEEEeecC-------------C-c---------chHHH----HHHHHHHh
Q 022401 28 VRDIGSGNFGVARLMRDKV------TKELVAVKYIERG-------------D-K---------IDENV----QREIINHR 74 (298)
Q Consensus 28 ~~~lg~g~~~~vy~~~~~~------~~~~~aiK~~~~~-------------~-~---------~~~~~----~~e~~~l~ 74 (298)
...||.|..+.||.|.... .+..+|+|++..+ . + ....+ .+|...|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 4578999999999998753 3578999987421 0 0 01222 27888888
Q ss_pred cCCC--CCeeeeeEEEEeCCeEEEEEeccCCCCHHH-HHHhCCCCCHHHHHHHHHHHHHHHHHH-hhcCcEEecCCCCce
Q 022401 75 SLRH--PNIVRFKEVILTPTHLAIVMEYASGGELFE-RICNAGRFSEDEARFFFQQLISGVSYC-HAMQVCHRDLKLENT 150 (298)
Q Consensus 75 ~l~h--~~i~~~~~~~~~~~~~~lv~~~~~~~sL~~-~l~~~~~~~~~~~~~i~~~l~~~l~~L-h~~~i~H~dl~p~ni 150 (298)
++.. -++.+.+++ ..-++|||++.+..+.. .+ ....++..+...+..+++.++..| |+.|++||||++.||
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~L-kd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NI 156 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKL-KDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNM 156 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhh-hccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHE
Confidence 8853 334444443 45678999997643321 22 222455667778889999999998 899999999999999
Q ss_pred EeeCCCCCCEEEeecCccc
Q 022401 151 LLDGSPAPRLKICDFGYSK 169 (298)
Q Consensus 151 lv~~~~~~~~~l~d~~~~~ 169 (298)
++.+ +. ++++||+-+.
T Consensus 157 L~~~-~~--v~iIDF~qav 172 (197)
T cd05146 157 LWHD-GK--VWFIDVSQSV 172 (197)
T ss_pred EEEC-Cc--EEEEECCCce
Confidence 9974 33 9999999654
No 440
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.40 E-value=3e-12 Score=114.92 Aligned_cols=137 Identities=17% Similarity=0.178 Sum_probs=93.9
Q ss_pred eeeccCCeEEEEEEEEccCCcEEEEEEeecCCcch-------------------------------H----------HHH
Q 022401 29 RDIGSGNFGVARLMRDKVTKELVAVKYIERGDKID-------------------------------E----------NVQ 67 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~-------------------------------~----------~~~ 67 (298)
+.||.|++|.||+|+.+ +|+.||||+...+.... + ++.
T Consensus 123 ~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 123 KPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred cceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 57999999999999976 68899999975431000 0 122
Q ss_pred HHHHHHhcC----C-CCCeeeeeEEEEeCCeEEEEEeccCCCCHHHHHHhC-CCCCHHHHHHHHHHHHH-HHHHHhhcCc
Q 022401 68 REIINHRSL----R-HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNA-GRFSEDEARFFFQQLIS-GVSYCHAMQV 140 (298)
Q Consensus 68 ~e~~~l~~l----~-h~~i~~~~~~~~~~~~~~lv~~~~~~~sL~~~l~~~-~~~~~~~~~~i~~~l~~-~l~~Lh~~~i 140 (298)
+|...+.++ + ++++.-..-+.......++||||++|.+|.+..... ... ....++..++. .+..+|..|+
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~---~~~~ia~~~~~~~l~ql~~~g~ 278 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGL---DRKALAENLARSFLNQVLRDGF 278 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCC---CHHHHHHHHHHHHHHHHHhCCc
Confidence 344444433 2 344333222333345678999999999998776432 112 23456666665 4788999999
Q ss_pred EEecCCCCceEeeCCCCCCEEEeecCccccc
Q 022401 141 CHRDLKLENTLLDGSPAPRLKICDFGYSKSS 171 (298)
Q Consensus 141 ~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~ 171 (298)
+|+|++|.||+++.++. ++++|||++...
T Consensus 279 ~H~D~hPgNilv~~~g~--i~liDfG~~~~l 307 (437)
T TIGR01982 279 FHADLHPGNIFVLKDGK--IIALDFGIVGRL 307 (437)
T ss_pred eeCCCCcccEEECCCCc--EEEEeCCCeeEC
Confidence 99999999999988876 999999987643
No 441
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.38 E-value=3.7e-13 Score=126.26 Aligned_cols=262 Identities=25% Similarity=0.321 Sum_probs=194.1
Q ss_pred CCCCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcc----hHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeE
Q 022401 19 MHDSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKI----DENVQREIINHRSLRHPNIVRFKEVILTPTHL 94 (298)
Q Consensus 19 ~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 94 (298)
..+.+.+.+.+.+..|.++.++.+.-..+|...+.|........ .+....+-+++..-.+|-++.....+......
T Consensus 800 rsS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~ 879 (1205)
T KOG0606|consen 800 RSSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPL 879 (1205)
T ss_pred cCCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCc
Confidence 35778999999999999999999988878866676654432211 12222233333333456666544444456678
Q ss_pred EEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCC
Q 022401 95 AIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH 174 (298)
Q Consensus 95 ~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~ 174 (298)
++++++.++++|...+++.+..+..-....+..+.+++++||+..+.|+|++|.|.+...+++ .++.+|+.......-
T Consensus 880 ~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh--~~l~~~~t~~~vg~~ 957 (1205)
T KOG0606|consen 880 PLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGH--RPLTDFGTLSKVGLI 957 (1205)
T ss_pred chhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCC--cccCccccccccccc
Confidence 999999999999999998887777778888889999999999999999999999999998888 788888732100000
Q ss_pred --------------------------------CCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCC
Q 022401 175 --------------------------------SQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFE 222 (298)
Q Consensus 175 --------------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~ 222 (298)
.......+++.|.+||...+...... +|.|+.|+++++.++|..||+
T Consensus 958 ~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~-ad~~~~g~~l~e~l~g~pp~n 1036 (1205)
T KOG0606|consen 958 PPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSA-ADWWSSGVCLFEVLTGIPPFN 1036 (1205)
T ss_pred cCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCc-chhhhhhhhhhhhhcCCCCCC
Confidence 00111236788999999888877665 999999999999999999999
Q ss_pred CCCCchhHHHHHHHHhhcCCCCCC-CCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 223 DPDEPKDFRKTIQRILSVQYSVPD-TNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
.... .+..+.+.+....++. +...+++.++++...+..+|.+|..+...- .+-.|||+++.
T Consensus 1037 a~tp----q~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~-----e~k~~~~~~~~ 1098 (1205)
T KOG0606|consen 1037 AETP----QQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAA-----EVKGHPFFQDV 1098 (1205)
T ss_pred Ccch----hhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCccccc-----ccccCCccCCC
Confidence 8765 3444556666665554 334688999999999999999999885333 45578877754
No 442
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.37 E-value=7.4e-13 Score=117.90 Aligned_cols=249 Identities=18% Similarity=0.148 Sum_probs=174.2
Q ss_pred CCCeeEEeeeccCCeEEEEEEEEc-cCCcEEEEEEeecCCcch-HHH--HHHHHHHhcC-CCCCeeeeeEEEEeCCeEEE
Q 022401 22 SDRYDFVRDIGSGNFGVARLMRDK-VTKELVAVKYIERGDKID-ENV--QREIINHRSL-RHPNIVRFKEVILTPTHLAI 96 (298)
Q Consensus 22 ~~~y~~~~~lg~g~~~~vy~~~~~-~~~~~~aiK~~~~~~~~~-~~~--~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l 96 (298)
..+|.++..||.|.|+.|+....+ .++..|++|-........ +++ ..|+.+...+ .|.+.+.....+......|+
T Consensus 264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~i 343 (524)
T KOG0601|consen 264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYI 343 (524)
T ss_pred cCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccC
Confidence 358999999999999999887755 567788888665432221 221 2455555555 47777777677767777779
Q ss_pred EEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCC
Q 022401 97 VMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ 176 (298)
Q Consensus 97 v~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~ 176 (298)
--||+.++++.....-...+++...+++..+++.++.++|+..++|+|++|+||++..++ ...+++||+...... ..
T Consensus 344 p~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~-~~~~~~~~~~~t~~~--~~ 420 (524)
T KOG0601|consen 344 PLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDG-FFSKLGDFGCWTRLA--FS 420 (524)
T ss_pred chhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccch-hhhhccccccccccc--ee
Confidence 999999988877665555688899999999999999999999999999999999998764 348899999776411 11
Q ss_pred CCCCCCCCcccC-ccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHH
Q 022401 177 PKSTVGTPAYIA-PEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECR 255 (298)
Q Consensus 177 ~~~~~~~~~~~a-PE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 255 (298)
........++.+ .|.+........+.|++|||.-+.+.+++...-....... .+..+ ..+........+.
T Consensus 421 ~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~~-------~i~~~--~~p~~~~~~~~~q 491 (524)
T KOG0601|consen 421 SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQSL-------TIRSG--DTPNLPGLKLQLQ 491 (524)
T ss_pred cccccccccccccchhhccccccccccccccccccccccccCcccCcccccce-------eeecc--cccCCCchHHhhh
Confidence 122233344442 5555555444555999999999999998764322211100 11111 2233333457788
Q ss_pred HHHHHhhhhCCCCcccccccchhhhHH
Q 022401 256 DLISRIFVADPAAVSIFFFPLNMSCLL 282 (298)
Q Consensus 256 ~li~~~l~~dp~~Rps~~~~l~~~~~~ 282 (298)
.+..-+...++..||.+.+...++-+.
T Consensus 492 ~~~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 492 VLLKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred hhhhhhcCCccccchhhhhhcccchhh
Confidence 888999999999999987776655443
No 443
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.36 E-value=7.7e-12 Score=96.32 Aligned_cols=129 Identities=23% Similarity=0.212 Sum_probs=102.2
Q ss_pred eeeccCCeEEEEEEEEccCCcEEEEEEeecC----Ccch-----HHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEe
Q 022401 29 RDIGSGNFGVARLMRDKVTKELVAVKYIERG----DKID-----ENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVME 99 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~----~~~~-----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~ 99 (298)
..+++|+-+.+|.+... |..+++|.-... +... ++-.+|..++.++.--++....-+..+.....++||
T Consensus 2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me 79 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVME 79 (204)
T ss_pred chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEE
Confidence 35789999999988664 445777754321 2222 334578999998887788777778888999999999
Q ss_pred ccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccc
Q 022401 100 YASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK 169 (298)
Q Consensus 100 ~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~ 169 (298)
|.+|..|.+.+... ...+++.+-.-+.-||..||+||||+++||++++++ +.++|||++.
T Consensus 80 ~I~G~~lkd~l~~~-------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~---i~~IDfGLg~ 139 (204)
T COG3642 80 YIEGELLKDALEEA-------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR---IYFIDFGLGE 139 (204)
T ss_pred EeCChhHHHHHHhc-------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc---EEEEECCccc
Confidence 99999999888665 255778888888899999999999999999998665 8999999875
No 444
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.35 E-value=1.4e-11 Score=94.58 Aligned_cols=141 Identities=16% Similarity=0.097 Sum_probs=108.8
Q ss_pred EEeeeccCCeEEEEEEEEccCCcEEEEEEeec---------CCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEE
Q 022401 27 FVRDIGSGNFGVARLMRDKVTKELVAVKYIER---------GDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIV 97 (298)
Q Consensus 27 ~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~---------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 97 (298)
....+.+|+.+.|+.+... |+.++||.-.. ......+-++|...+.++.--+|....-++.+.+.-.+.
T Consensus 11 ~l~likQGAEArv~~~~~~--Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ 88 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS--GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIY 88 (229)
T ss_pred cceeeeccceeeEeeeccC--CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEE
Confidence 6788999999999988774 77788885322 112234566899999888777777777788888888999
Q ss_pred EeccCC-CCHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCC-CEEEeecCccc
Q 022401 98 MEYASG-GELFERICNAG--RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAP-RLKICDFGYSK 169 (298)
Q Consensus 98 ~~~~~~-~sL~~~l~~~~--~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~-~~~l~d~~~~~ 169 (298)
|||.+| .++.+++.... .....-...+++.+-..+..||.++++||||..+||++.+++.. .+.++|||++.
T Consensus 89 ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 89 MEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSS 164 (229)
T ss_pred EEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchh
Confidence 999977 46666664332 33333447899999999999999999999999999999877764 25899999875
No 445
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.35 E-value=6.4e-11 Score=104.08 Aligned_cols=212 Identities=18% Similarity=0.224 Sum_probs=149.1
Q ss_pred EEEEEEEEccCCcEEEEEEeecCCcchH-HHHHHHHHHhcCCCCCeeeeeEEEE----eCCeEEEEEeccCC-CCHHHHH
Q 022401 37 GVARLMRDKVTKELVAVKYIERGDKIDE-NVQREIINHRSLRHPNIVRFKEVIL----TPTHLAIVMEYASG-GELFERI 110 (298)
Q Consensus 37 ~~vy~~~~~~~~~~~aiK~~~~~~~~~~-~~~~e~~~l~~l~h~~i~~~~~~~~----~~~~~~lv~~~~~~-~sL~~~l 110 (298)
.+.|++....+|..|++|++.-...... ..-..++.++++.|.|++++.+++. .+..+++|++|.++ .+|.++-
T Consensus 290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~ 369 (655)
T KOG3741|consen 290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLY 369 (655)
T ss_pred ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHH
Confidence 4889999999999999999843222222 3345678899999999999999986 45689999999975 5565543
Q ss_pred H---------------hCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCC
Q 022401 111 C---------------NAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS 175 (298)
Q Consensus 111 ~---------------~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~ 175 (298)
. ++...++..+|.++.|+..||.++|+.|+...-|.+.+|+++.+. ++++...|.........
T Consensus 370 F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~--RIriS~C~i~Dvl~~d~ 447 (655)
T KOG3741|consen 370 FANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKM--RIRISGCGIMDVLQEDP 447 (655)
T ss_pred ccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcc--eEEEecccceeeecCCC
Confidence 2 223477899999999999999999999999999999999998665 48877665433211111
Q ss_pred CCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHH
Q 022401 176 QPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECR 255 (298)
Q Consensus 176 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 255 (298)
. +.+.. -.+.|.--||.++..+.||..--...+..... ....+ ...++.+++
T Consensus 448 -----------~--~~le~----~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s--~~~~I---------~~~yS~D~r 499 (655)
T KOG3741|consen 448 -----------T--EPLES----QQQNDLRDLGLLLLALATGTENSNRTDSTQSS--HLTRI---------TTTYSTDLR 499 (655)
T ss_pred -----------C--cchhH----HhhhhHHHHHHHHHHHhhcccccccccchHHH--HHHHh---------hhhhhHHHH
Confidence 0 11111 22379999999999999997432222221111 01111 112678999
Q ss_pred HHHHHhhhhCCCCcccccccchhh
Q 022401 256 DLISRIFVADPAAVSIFFFPLNMS 279 (298)
Q Consensus 256 ~li~~~l~~dp~~Rps~~~~l~~~ 279 (298)
.+|.-+...++++ .++.+++-|.
T Consensus 500 n~v~yl~s~~~~~-ksI~~llp~~ 522 (655)
T KOG3741|consen 500 NVVEYLESLNFRE-KSIQDLLPMI 522 (655)
T ss_pred HHHHHHHhcCccc-ccHHHHHHHH
Confidence 9999999999997 5565555444
No 446
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.34 E-value=1.1e-12 Score=119.31 Aligned_cols=140 Identities=24% Similarity=0.311 Sum_probs=90.0
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcc-----------------------------------hHH---
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKI-----------------------------------DEN--- 65 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~-----------------------------------~~~--- 65 (298)
.|+. +.||.|++|.||.|+.+.+|+.||||+...+-.. ...
T Consensus 121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ 199 (537)
T PRK04750 121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHD 199 (537)
T ss_pred hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHH
Confidence 4666 7899999999999999877999999998643110 011
Q ss_pred ---HHHHHHHHhcC----CCCCeeeeeEEEE-eCCeEEEEEeccCCCCHHHH--HHhCC----CCCHHHHHHHHHHHHHH
Q 022401 66 ---VQREIINHRSL----RHPNIVRFKEVIL-TPTHLAIVMEYASGGELFER--ICNAG----RFSEDEARFFFQQLISG 131 (298)
Q Consensus 66 ---~~~e~~~l~~l----~h~~i~~~~~~~~-~~~~~~lv~~~~~~~sL~~~--l~~~~----~~~~~~~~~i~~~l~~~ 131 (298)
+.+|...+.++ .+.+.+.+=.++. .....++||||++|+++.+. +...+ .+.+..+..++.|+
T Consensus 200 ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi--- 276 (537)
T PRK04750 200 ELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV--- 276 (537)
T ss_pred hhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH---
Confidence 12233333333 2333333223332 24566799999999999764 22222 12233333334443
Q ss_pred HHHHhhcCcEEecCCCCceEeeCCC--CCCEEEeecCccccc
Q 022401 132 VSYCHAMQVCHRDLKLENTLLDGSP--APRLKICDFGYSKSS 171 (298)
Q Consensus 132 l~~Lh~~~i~H~dl~p~nilv~~~~--~~~~~l~d~~~~~~~ 171 (298)
...|++|+|++|.||+++.++ .+++++.|||++...
T Consensus 277 ----f~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l 314 (537)
T PRK04750 277 ----FRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSL 314 (537)
T ss_pred ----HhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEEC
Confidence 468999999999999998776 224999999987533
No 447
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.31 E-value=5.6e-13 Score=120.45 Aligned_cols=231 Identities=18% Similarity=0.247 Sum_probs=143.8
Q ss_pred CCCcCCCCCCCCCeeEEeeeccCCeE---EEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCeeeeeEEE
Q 022401 12 PAMDMPIMHDSDRYDFVRDIGSGNFG---VARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVI 88 (298)
Q Consensus 12 ~~~~~~~~~~~~~y~~~~~lg~g~~~---~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 88 (298)
-.+..++.....+|+..+.+|..+-| ..|.+.....+.....|... .+.+.+....+++++|
T Consensus 26 ~~~~l~~~~~~~~~~~~~~~~~~g~g~~~~ly~~~~~~sk~~~~~~s~~-----~~~ld~~~~~~~~lr~---------- 90 (700)
T KOG2137|consen 26 IVQVLPGPKESQSYRSLNQVGSAGPGDAWKLYAGKKSGSKAPTLKKSAV-----VWMLDKRASSLQQLRG---------- 90 (700)
T ss_pred eeEecCCcccccccccccceeecCCCchhhhhhhhccCccCccccceee-----eeecChhhhHHHHHhc----------
Confidence 34567788888999999999876655 55666555554444233221 1222223334444555
Q ss_pred EeCCeEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHh-hcCcEEecCCCCceEeeCCCCCCEEEeecCc
Q 022401 89 LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCH-AMQVCHRDLKLENTLLDGSPAPRLKICDFGY 167 (298)
Q Consensus 89 ~~~~~~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh-~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~ 167 (298)
.+...+ .-+....=+.+++.|+.++| +.++||++|.|++|.++.++. .|++.|++
T Consensus 91 ---------~~~vs~-------------aTe~~f~nl~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~--wkl~Gf~f 146 (700)
T KOG2137|consen 91 ---------LDGVSK-------------ATEDGFANLGNVADGLAFLHRSAKVVHGNIQPEAIVVNANGD--WKLAGFSF 146 (700)
T ss_pred ---------ccchhh-------------cccHhhhhhhcccchhhhhccCcceeecccchhheeeccCcc--eeeccchh
Confidence 011100 01111222344559999999 568999999999999999988 99999998
Q ss_pred cccccCCCC----------CCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCC-CCCCCCchhHHHHHHH
Q 022401 168 SKSSVLHSQ----------PKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYP-FEDPDEPKDFRKTIQR 236 (298)
Q Consensus 168 ~~~~~~~~~----------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~p-f~~~~~~~~~~~~~~~ 236 (298)
+........ .........|.+||.+.+...... +|+||+|+++|-+..|..+ +...+...........
T Consensus 147 ~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~~~~~-sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~ 225 (700)
T KOG2137|consen 147 CVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTTNTPA-SDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNL 225 (700)
T ss_pred hhccCCCCccccccCCCCCChhhccCcccccchhhcccccccc-ccceeeeeEEEEEecCCcchhhccCCcchhhhhhcc
Confidence 753322111 111224567999999988555555 9999999999998855544 3333222211111111
Q ss_pred HhhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhh
Q 022401 237 ILSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDA 292 (298)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~ 292 (298)
.........+++|+++++=+.+++..|+..||++ ......||++|+
T Consensus 226 --~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~--------~~l~~~~ff~D~ 271 (700)
T KOG2137|consen 226 --LNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTL--------DLLLSIPFFSDP 271 (700)
T ss_pred --cccccccccccCcHHHHHHHHHHhcCCcccCcch--------hhhhcccccCCc
Confidence 1111222335689999999999999999999966 455567777664
No 448
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.29 E-value=6.7e-11 Score=101.65 Aligned_cols=239 Identities=13% Similarity=0.088 Sum_probs=154.8
Q ss_pred eeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCeeeeeEE------EEe-CCeEEEE
Q 022401 25 YDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEV------ILT-PTHLAIV 97 (298)
Q Consensus 25 y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~------~~~-~~~~~lv 97 (298)
...++.||+|+.+.+|......+ .+-|++....--.+ -++-..+.+.-.||-+-.=+.+ .-+ .....++
T Consensus 13 i~~gr~LgqGgea~ly~l~e~~d---~VAKIYh~Pppa~~-aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGfl 88 (637)
T COG4248 13 IPPGRPLGQGGEADLYTLGEVRD---QVAKIYHAPPPAAQ-AQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFL 88 (637)
T ss_pred cCCCccccCCccceeeecchhhc---hhheeecCCCchHH-HHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEe
Confidence 34568899999999998766433 46677655332111 1111122222245433221111 011 2236777
Q ss_pred EeccCCCC-HHHHH------HhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCcccc
Q 022401 98 MEYASGGE-LFERI------CNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKS 170 (298)
Q Consensus 98 ~~~~~~~s-L~~~l------~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~ 170 (298)
|+...+.- ...+. ...+..+...+++.++.++.+-..||+.|.+-||++++|++|++++. ++|.|-+....
T Consensus 89 mP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~--V~LVdsDsfqi 166 (637)
T COG4248 89 MPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSK--VVLVDSDSFQI 166 (637)
T ss_pred cccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCce--EEEEcccceee
Confidence 87776531 11111 22345778899999999999999999999999999999999998887 99999876655
Q ss_pred ccCCCCCCCCCCCCcccCccccccc-----cCCCCccchHHHHHHHHHHHhC-CCCCCCCCC----chhHHHHHHHHhhc
Q 022401 171 SVLHSQPKSTVGTPAYIAPEVLLRH-----EYDGKIADVWSCGVTLYVMLVG-GYPFEDPDE----PKDFRKTIQRILSV 240 (298)
Q Consensus 171 ~~~~~~~~~~~~~~~~~aPE~~~~~-----~~~~~~~Di~slG~ll~~l~~g-~~pf~~~~~----~~~~~~~~~~~~~~ 240 (298)
...........+..+|++||...-. ..+.+ +|.|.||+++++++.| ..||.+... ....+. .|..+
T Consensus 167 ~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~-hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~---~Ia~g 242 (637)
T COG4248 167 NANGTLHLCPVGVSEFTPPELQTLPSFVGFERTAN-HDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLET---DIAHG 242 (637)
T ss_pred ccCCceEecccCccccCCHHHhccccccccCCCcc-ccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchh---hhhcc
Confidence 5556666777889999999976522 33455 8999999999999987 789876421 111111 11111
Q ss_pred CC--------------CCCCCCCCCHHHHHHHHHhhhh--CCCCccccc
Q 022401 241 QY--------------SVPDTNPISQECRDLISRIFVA--DPAAVSIFF 273 (298)
Q Consensus 241 ~~--------------~~~~~~~~~~~l~~li~~~l~~--dp~~Rps~~ 273 (298)
.+ .......+++++..+..+|+.. ++.-|||++
T Consensus 243 ~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~ 291 (637)
T COG4248 243 RFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAK 291 (637)
T ss_pred eeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHH
Confidence 11 1111123679999999999965 456899874
No 449
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.19 E-value=2e-10 Score=94.06 Aligned_cols=139 Identities=19% Similarity=0.261 Sum_probs=101.4
Q ss_pred eeeccCCeEEEEEEEEccCCcEEEEEEeecCCc--chHHHHHHHHHHhcCCCCC--eeeeeEEEEeC---CeEEEEEecc
Q 022401 29 RDIGSGNFGVARLMRDKVTKELVAVKYIERGDK--IDENVQREIINHRSLRHPN--IVRFKEVILTP---THLAIVMEYA 101 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~e~~~l~~l~h~~--i~~~~~~~~~~---~~~~lv~~~~ 101 (298)
+.|+.|..+.+|++.... |..+++|....... ....+.+|..+++.+.+.+ +.+++.+.... +..++|++++
T Consensus 4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i 82 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV 82 (223)
T ss_pred eecCCCccceEEEEEecC-CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence 678999999999998753 57899998765433 3557789999999886533 56666665543 2568999999
Q ss_pred CCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhh--------------------------------------------
Q 022401 102 SGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA-------------------------------------------- 137 (298)
Q Consensus 102 ~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~-------------------------------------------- 137 (298)
+|.++...+.. ..++......++.++++++..||+
T Consensus 83 ~G~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (223)
T cd05154 83 DGRVLRDRLLR-PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLL 161 (223)
T ss_pred CCEecCCCCCC-CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHH
Confidence 99888665422 345666666777777777777763
Q ss_pred ------------cCcEEecCCCCceEeeCCCCCCEEEeecCccc
Q 022401 138 ------------MQVCHRDLKLENTLLDGSPAPRLKICDFGYSK 169 (298)
Q Consensus 138 ------------~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~ 169 (298)
..++|+|++|.||+++.++...+.++||+.+.
T Consensus 162 ~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~ 205 (223)
T cd05154 162 RWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT 205 (223)
T ss_pred HHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence 23589999999999987422237899998654
No 450
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.17 E-value=1.2e-09 Score=91.50 Aligned_cols=130 Identities=14% Similarity=0.034 Sum_probs=91.9
Q ss_pred EEEEEEEccCCcEEEEEEeecCCcc------------hHHHHHHHHHHhcCCCCCee--eeeEEEEe-----CCeEEEEE
Q 022401 38 VARLMRDKVTKELVAVKYIERGDKI------------DENVQREIINHRSLRHPNIV--RFKEVILT-----PTHLAIVM 98 (298)
Q Consensus 38 ~vy~~~~~~~~~~~aiK~~~~~~~~------------~~~~~~e~~~l~~l~h~~i~--~~~~~~~~-----~~~~~lv~ 98 (298)
.|+.... .|+.|.+|........ ...+.+|...+.++...+|. +.+.+.+. ...-++|+
T Consensus 37 rvvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVt 114 (268)
T PRK15123 37 RTLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIIT 114 (268)
T ss_pred eEEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEE
Confidence 3444433 5678999976432211 11367888888877544432 33445443 23467999
Q ss_pred eccCCC-CHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeC-----CCCCCEEEeecCccc
Q 022401 99 EYASGG-ELFERICN--AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDG-----SPAPRLKICDFGYSK 169 (298)
Q Consensus 99 ~~~~~~-sL~~~l~~--~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~-----~~~~~~~l~d~~~~~ 169 (298)
|++++. +|.+++.. ..+.+......++.+++..+..||..|++|+|+++.||+++. ++...+.|+||+-+.
T Consensus 115 e~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 115 EDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ 193 (268)
T ss_pred eeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence 999875 78888753 334566778899999999999999999999999999999975 334569999999653
No 451
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.96 E-value=4.8e-09 Score=85.85 Aligned_cols=130 Identities=21% Similarity=0.226 Sum_probs=96.2
Q ss_pred eeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC-----------------------cchHHHHHHHHHHhcCCCC--
Q 022401 25 YDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD-----------------------KIDENVQREIINHRSLRHP-- 79 (298)
Q Consensus 25 y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~-----------------------~~~~~~~~e~~~l~~l~h~-- 79 (298)
+.++..||-|.-|.||.+.+. .|..+++|.=..+. .......+|.++|.+|...
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 467899999999999999997 67889999532110 0112356788999988655
Q ss_pred CeeeeeEEEEeCCeEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCC
Q 022401 80 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPR 159 (298)
Q Consensus 80 ~i~~~~~~~~~~~~~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~ 159 (298)
.+.+.++ .+.-.+|||+.+|..|...- ++......++..|+..+..+=..|++|||+++-||+++.+|.
T Consensus 172 ~VP~P~~----~nRHaVvMe~ieG~eL~~~r-----~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~-- 240 (304)
T COG0478 172 KVPKPIA----WNRHAVVMEYIEGVELYRLR-----LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGD-- 240 (304)
T ss_pred CCCCccc----cccceeeeehcccceeeccc-----CcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCC--
Confidence 5555544 45668899999987664332 134455556666777666666999999999999999999987
Q ss_pred EEEeecC
Q 022401 160 LKICDFG 166 (298)
Q Consensus 160 ~~l~d~~ 166 (298)
++++||-
T Consensus 241 ~~vIDwP 247 (304)
T COG0478 241 IVVIDWP 247 (304)
T ss_pred EEEEeCc
Confidence 9999995
No 452
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.94 E-value=1.3e-08 Score=80.67 Aligned_cols=122 Identities=25% Similarity=0.284 Sum_probs=76.8
Q ss_pred EEEEEEEccCCcEEEEEEeecC--------------Cc--------c-----hHHHHHHHHHHhcCCCCC--eeeeeEEE
Q 022401 38 VARLMRDKVTKELVAVKYIERG--------------DK--------I-----DENVQREIINHRSLRHPN--IVRFKEVI 88 (298)
Q Consensus 38 ~vy~~~~~~~~~~~aiK~~~~~--------------~~--------~-----~~~~~~e~~~l~~l~h~~--i~~~~~~~ 88 (298)
.||.|... +|..+|+|+...+ .+ . .....+|...|.++..-+ +.+.+++
T Consensus 1 ~Vy~~~~~-~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~- 78 (188)
T PF01163_consen 1 DVYHAIDP-DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY- 78 (188)
T ss_dssp EEEEEEEC-TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE-
T ss_pred CEEEEECC-CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE-
Confidence 37888774 5678999986421 00 0 123567999999997654 4455443
Q ss_pred EeCCeEEEEEeccC--CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHH-HhhcCcEEecCCCCceEeeCCCCCCEEEeec
Q 022401 89 LTPTHLAIVMEYAS--GGELFERICNAGRFSEDEARFFFQQLISGVSY-CHAMQVCHRDLKLENTLLDGSPAPRLKICDF 165 (298)
Q Consensus 89 ~~~~~~~lv~~~~~--~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~-Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~ 165 (298)
.. -++||||++ |..+..+.... ++......++.+++..+.. +|+.|++||||++.||+++.+ . ++++||
T Consensus 79 -~~--~~ivME~I~~~G~~~~~l~~~~--~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~--~~iIDf 150 (188)
T PF01163_consen 79 -NR--NVIVMEYIGEDGVPLPRLKDVD--LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-K--VYIIDF 150 (188)
T ss_dssp -ET--TEEEEE--EETTEEGGCHHHCG--GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-C--EEE--G
T ss_pred -eC--CEEEEEecCCCccchhhHHhcc--ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-e--EEEEec
Confidence 22 358999998 76665544322 1133456677777774444 689999999999999999877 3 999999
Q ss_pred Cccc
Q 022401 166 GYSK 169 (298)
Q Consensus 166 ~~~~ 169 (298)
+.+.
T Consensus 151 ~qav 154 (188)
T PF01163_consen 151 GQAV 154 (188)
T ss_dssp TTEE
T ss_pred Ccce
Confidence 9654
No 453
>PRK09902 hypothetical protein; Provisional
Probab=98.94 E-value=2.6e-08 Score=79.51 Aligned_cols=136 Identities=9% Similarity=0.051 Sum_probs=99.9
Q ss_pred ccCCeEEEEEEEEccCCcEEEEEEeecC-------CcchHHHHHHHHHHhcCCCCC--eeeeeEEEEe--C--CeEEEEE
Q 022401 32 GSGNFGVARLMRDKVTKELVAVKYIERG-------DKIDENVQREIINHRSLRHPN--IVRFKEVILT--P--THLAIVM 98 (298)
Q Consensus 32 g~g~~~~vy~~~~~~~~~~~aiK~~~~~-------~~~~~~~~~e~~~l~~l~h~~--i~~~~~~~~~--~--~~~~lv~ 98 (298)
+.||-|-|+..... |..+-+|+.... +.....+.+|...++++..-+ +.+++..... . ..-++|+
T Consensus 27 ~rgG~SgV~r~~~~--g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 27 RRNGMSGVQCVERN--GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT 104 (216)
T ss_pred CCCCcceEEEEEeC--CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence 34888888887764 446888886521 345678999999998885322 4444422111 1 2357888
Q ss_pred eccC-CCCHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccc
Q 022401 99 EYAS-GGELFERICNA--GRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK 169 (298)
Q Consensus 99 ~~~~-~~sL~~~l~~~--~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~ 169 (298)
+..+ ..+|.+++.+. .+.+......++.+++.++..||+.|+.|+|+.+.||+++.++...+.++||.-++
T Consensus 105 e~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 105 EDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred EeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence 8664 36888877553 34577888899999999999999999999999999999986665569999998543
No 454
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.86 E-value=3.9e-08 Score=79.63 Aligned_cols=107 Identities=19% Similarity=0.200 Sum_probs=82.7
Q ss_pred hHHHHHHHHHHhcCCCCCe--eeeeEEEEeC----CeEEEEEeccCC-CCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHH
Q 022401 63 DENVQREIINHRSLRHPNI--VRFKEVILTP----THLAIVMEYASG-GELFERICNAGRFSEDEARFFFQQLISGVSYC 135 (298)
Q Consensus 63 ~~~~~~e~~~l~~l~h~~i--~~~~~~~~~~----~~~~lv~~~~~~-~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~L 135 (298)
.....+|...+.++...+| .+.+++.+.. ...++|++++++ .+|.+++......+......++.+++..+..|
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~l 134 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKL 134 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHH
Confidence 3567788888877754333 3444554442 245889999987 47888887755577788899999999999999
Q ss_pred hhcCcEEecCCCCceEeeCCC-CCCEEEeecCccc
Q 022401 136 HAMQVCHRDLKLENTLLDGSP-APRLKICDFGYSK 169 (298)
Q Consensus 136 h~~~i~H~dl~p~nilv~~~~-~~~~~l~d~~~~~ 169 (298)
|+.|++|+|+++.|||++.++ ...+.++||+-+.
T Consensus 135 H~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~ 169 (206)
T PF06293_consen 135 HDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMR 169 (206)
T ss_pred HHCcCCCCCCCcccEEEeCCCCceeEEEEcchhce
Confidence 999999999999999998775 4459999998654
No 455
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.80 E-value=1.8e-07 Score=75.12 Aligned_cols=135 Identities=16% Similarity=0.145 Sum_probs=90.6
Q ss_pred CCCCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHH----------HHHHHHHHhcC---CCCCeeeeeEE
Q 022401 21 DSDRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDEN----------VQREIINHRSL---RHPNIVRFKEV 87 (298)
Q Consensus 21 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~----------~~~e~~~l~~l---~h~~i~~~~~~ 87 (298)
..++|.+.+++-......|-+..- +|+.+++|.........++ ..+++....++ ..-....++.+
T Consensus 29 ~~~~~~~~kv~k~~~r~~ValIei--~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~ 106 (229)
T PF06176_consen 29 LDNNYKIIKVFKNTKRNYVALIEI--DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLA 106 (229)
T ss_pred HhCCceEEEeecCCCccEEEEEEE--CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceee
Confidence 357899999999888777776665 4678999987653322222 12233333333 22333333333
Q ss_pred EE-----eCCeEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEE
Q 022401 88 IL-----TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKI 162 (298)
Q Consensus 88 ~~-----~~~~~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l 162 (298)
.+ .....++++||++|..|.+... +++ .+...+.+++.-||+.|++|||.+|.|++++.++ +++
T Consensus 107 ~ekk~~~~~~~~~ll~EYIeG~~l~d~~~----i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~~---i~i 175 (229)
T PF06176_consen 107 AEKKIFRYTSSYVLLMEYIEGVELNDIED----IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNNG---IRI 175 (229)
T ss_pred eeeeeccceeEEEEEEEEecCeecccchh----cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEECCc---EEE
Confidence 22 2345678999999988765432 222 2456677889999999999999999999998655 899
Q ss_pred eecCcc
Q 022401 163 CDFGYS 168 (298)
Q Consensus 163 ~d~~~~ 168 (298)
.|++..
T Consensus 176 ID~~~k 181 (229)
T PF06176_consen 176 IDTQGK 181 (229)
T ss_pred EECccc
Confidence 999754
No 456
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.55 E-value=1.9e-06 Score=70.78 Aligned_cols=72 Identities=17% Similarity=0.169 Sum_probs=53.7
Q ss_pred eeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCC--eeeeeEEEEeCCeEEEEEeccCCCC
Q 022401 29 RDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHPN--IVRFKEVILTPTHLAIVMEYASGGE 105 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~--i~~~~~~~~~~~~~~lv~~~~~~~s 105 (298)
..|++|..+.||+. .+..+++|...... ......+|.+.++.+..-+ +.+.+.+..+.+...+||++++|.+
T Consensus 7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~-~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~ 80 (226)
T TIGR02172 7 TQTGEGGNGESYTH----KTGKWMLKLYNPGF-DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKR 80 (226)
T ss_pred eeecCCCCcceeEe----cCCCEEEEeCCCCC-CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCcc
Confidence 57899999999973 24457889876533 3456788999998886443 4667777777778889999999863
No 457
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.54 E-value=6.5e-07 Score=86.30 Aligned_cols=204 Identities=20% Similarity=0.229 Sum_probs=142.8
Q ss_pred HHHHHHHHhcCCCCCeeeeeEEEEeCCeE----EEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcE
Q 022401 66 VQREIINHRSLRHPNIVRFKEVILTPTHL----AIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVC 141 (298)
Q Consensus 66 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~~----~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~ 141 (298)
...|...+..+.|+|+.....|....... .+..+++.+.++...+..-+..+..+.+.+..++..|+.++|+....
T Consensus 229 ~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~~l~ 308 (1351)
T KOG1035|consen 229 TEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSLSLE 308 (1351)
T ss_pred HHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHhccc
Confidence 34566777888999999999998765443 35567888999999999999999999999999999999999998666
Q ss_pred EecCCCC---ceEeeCCCCCCEEEe--ecCccccccCCCCCCCCCCCCcccCccccccccCCCC-ccchHHHHHHHHHHH
Q 022401 142 HRDLKLE---NTLLDGSPAPRLKIC--DFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRHEYDGK-IADVWSCGVTLYVML 215 (298)
Q Consensus 142 H~dl~p~---nilv~~~~~~~~~l~--d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~-~~Di~slG~ll~~l~ 215 (298)
|.-+.-. +.-++..+. +..+ ||+.+.................+.++|....+..... ..|+|.+|.+...+.
T Consensus 309 ~v~L~~s~~~~~~~~~e~~--~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~~ 386 (1351)
T KOG1035|consen 309 HVVLSASSSKESTVDGEGV--VAISLSDFDSSKPLPDNEKSFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQLS 386 (1351)
T ss_pred eeEEecccccccccCccce--eecchhhhcccccCCCcccchhhcCccccccccccccccchhhhhhHHHHHHHHHhhhh
Confidence 6555544 222233333 4444 8877766655555555566667788887765554322 279999999999998
Q ss_pred hCCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchhhhHHHhhhhhhhhhhh
Q 022401 216 VGGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNMSCLLLFSFVWMFDATE 294 (298)
Q Consensus 216 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~~~~~~~hp~~~~~~~ 294 (298)
.|..+-..... ...+.. . ....+..+.+..|+..++++|+++ .+++.|||+..+..
T Consensus 387 ~~~~i~~~~~~-------~~~~l~-------~-~~~~~~~d~~~~~~~~~~~~Rl~~--------~~ll~~~f~~~~~~ 442 (1351)
T KOG1035|consen 387 QGEDISEKSAV-------PVSLLD-------V-LSTSELLDALPKCLDEDSEERLSA--------LELLTHPFLRFPTD 442 (1351)
T ss_pred hcCcccccccc-------hhhhhc-------c-ccchhhhhhhhhhcchhhhhccch--------hhhhhchhcccccc
Confidence 77644222111 111111 1 012278889999999999999976 66667888765544
No 458
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.45 E-value=1.5e-06 Score=79.14 Aligned_cols=136 Identities=20% Similarity=0.204 Sum_probs=91.3
Q ss_pred eeeccCCeEEEEEEEEccCCcEEEEEEeecCCcch-----------------------------------HH------HH
Q 022401 29 RDIGSGNFGVARLMRDKVTKELVAVKYIERGDKID-----------------------------------EN------VQ 67 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~-----------------------------------~~------~~ 67 (298)
+.++.++-|.||.|+-+ +|+.||||+...+-+.. +. +.
T Consensus 131 ~PiAsASIaQVH~A~L~-sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~ 209 (517)
T COG0661 131 EPIASASIAQVHRAVLK-SGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR 209 (517)
T ss_pred CchhhhhHhhheeEEec-CCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence 56788999999999998 48999999875321000 11 22
Q ss_pred HHHHHHhcC-----CCCCeeeeeEEEEeCCeEEEEEeccCCCCHHHHHH-hCCCCCHHHHHHHHHHHHHH-HHHHhhcCc
Q 022401 68 REIINHRSL-----RHPNIVRFKEVILTPTHLAIVMEYASGGELFERIC-NAGRFSEDEARFFFQQLISG-VSYCHAMQV 140 (298)
Q Consensus 68 ~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~~~~~~~sL~~~l~-~~~~~~~~~~~~i~~~l~~~-l~~Lh~~~i 140 (298)
+|...+.++ ..+++.-..-|.+....-.++|||++|..+.+... .....+...+. ..++++ ++.+=..|+
T Consensus 210 ~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia---~~~~~~f~~q~~~dgf 286 (517)
T COG0661 210 REAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELA---ELLVRAFLRQLLRDGF 286 (517)
T ss_pred HHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHHHH---HHHHHHHHHHHHhcCc
Confidence 344444444 24555555555555677889999999998877742 22344533333 333322 334445899
Q ss_pred EEecCCCCceEeeCCCCCCEEEeecCcccc
Q 022401 141 CHRDLKLENTLLDGSPAPRLKICDFGYSKS 170 (298)
Q Consensus 141 ~H~dl~p~nilv~~~~~~~~~l~d~~~~~~ 170 (298)
.|+|.+|-||+++.++. +.+.|||+...
T Consensus 287 fHaDpHpGNi~v~~~g~--i~~lDfGi~g~ 314 (517)
T COG0661 287 FHADPHPGNILVRSDGR--IVLLDFGIVGR 314 (517)
T ss_pred cccCCCccceEEecCCc--EEEEcCcceec
Confidence 99999999999999977 99999998653
No 459
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.36 E-value=3.5e-06 Score=64.92 Aligned_cols=130 Identities=18% Similarity=0.153 Sum_probs=93.0
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCeee-eeEEEEeCCeEEEEEecc
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHPNIVR-FKEVILTPTHLAIVMEYA 101 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~-~~~~~~~~~~~~lv~~~~ 101 (298)
..-+..+.|+.|.+|.||++.+. |..+|+|+.. .+.....+..|.+++..+...++-+ ++.|..+ ++.|+|.
T Consensus 22 ~~~~v~~~L~KG~~s~Vyl~~~~--~~~~a~Kvrr-~ds~r~~l~kEakiLeil~g~~~~p~vy~yg~~----~i~me~i 94 (201)
T COG2112 22 YELRVEKELAKGTTSVVYLGEWR--GGEVALKVRR-RDSPRRNLEKEAKILEILAGEGVTPEVYFYGED----FIRMEYI 94 (201)
T ss_pred hhhhhhhhhhcccccEEEEeecc--CceEEEEEec-CCcchhhHHHHHHHHHHhhhcCCCceEEEechh----hhhhhhh
Confidence 34456788999999999999986 5578999544 4455678899999999998776644 4444322 2339999
Q ss_pred CCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCC--CceEeeCCCCCCEEEeecCccc
Q 022401 102 SGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKL--ENTLLDGSPAPRLKICDFGYSK 169 (298)
Q Consensus 102 ~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p--~nilv~~~~~~~~~l~d~~~~~ 169 (298)
.|.+|....... +. +-+..++....-|-..||-|+.|+- .||++++. . +.|+||..++
T Consensus 95 ~G~~L~~~~~~~---~r----k~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~-~--~~iIDFd~At 154 (201)
T COG2112 95 DGRPLGKLEIGG---DR----KHLLRVLEKAYKLDRLGIEHGELSRPWKNVLVNDR-D--VYIIDFDSAT 154 (201)
T ss_pred cCcchhhhhhcc---cH----HHHHHHHHHHHHHHHhccchhhhcCCceeEEecCC-c--EEEEEccchh
Confidence 998887765332 22 2344566666778889999999975 56666543 4 8999999765
No 460
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.34 E-value=7.1e-06 Score=66.80 Aligned_cols=133 Identities=17% Similarity=0.147 Sum_probs=83.6
Q ss_pred EeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcch-------------------------HHHHHHHHHHhcCCCCCe-
Q 022401 28 VRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKID-------------------------ENVQREIINHRSLRHPNI- 81 (298)
Q Consensus 28 ~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~-------------------------~~~~~e~~~l~~l~h~~i- 81 (298)
...|++|.-+.||.|... ++..+|+|++....... .-..+|..-|+++...++
T Consensus 53 ~g~istGKEA~Vy~a~~~-~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVr 131 (268)
T COG1718 53 VGCISTGKEANVYLAETG-DGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVR 131 (268)
T ss_pred EeeecCCcceEEEeeccC-CCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 347778888999999874 57889999986321110 012245555555532222
Q ss_pred -eeeeEEEEeCCeEEEEEeccCCCC-HHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhh-cCcEEecCCCCceEeeCCCCC
Q 022401 82 -VRFKEVILTPTHLAIVMEYASGGE-LFERICNAGRFSEDEARFFFQQLISGVSYCHA-MQVCHRDLKLENTLLDGSPAP 158 (298)
Q Consensus 82 -~~~~~~~~~~~~~~lv~~~~~~~s-L~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~-~~i~H~dl~p~nilv~~~~~~ 158 (298)
.+.+.+ ..-.+|||++.... -.-.|..- ++...+...+..++++.+.-|=. .++||+||+.-|||+. ++.
T Consensus 132 vP~Pi~~----~~nVLvMEfIg~~g~pAP~LkDv-~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~-~~~- 204 (268)
T COG1718 132 VPEPIAF----RNNVLVMEFIGDDGLPAPRLKDV-PLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH-DGE- 204 (268)
T ss_pred CCCceee----cCCeEEEEeccCCCCCCCCcccC-CcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE-CCe-
Confidence 222222 13357999985431 11112111 12333677778888888887765 9999999999999999 554
Q ss_pred CEEEeecCccc
Q 022401 159 RLKICDFGYSK 169 (298)
Q Consensus 159 ~~~l~d~~~~~ 169 (298)
++++|++=+.
T Consensus 205 -p~iID~~QaV 214 (268)
T COG1718 205 -PYIIDVSQAV 214 (268)
T ss_pred -EEEEECcccc
Confidence 8999998443
No 461
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.30 E-value=1.3e-05 Score=65.91 Aligned_cols=78 Identities=18% Similarity=0.179 Sum_probs=55.4
Q ss_pred EeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCC--CeeeeeEEEE---eCCeEEEEEeccC
Q 022401 28 VRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHP--NIVRFKEVIL---TPTHLAIVMEYAS 102 (298)
Q Consensus 28 ~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~--~i~~~~~~~~---~~~~~~lv~~~~~ 102 (298)
++.++.|..+.||.+.... +.+++|..... .....+.+|..+++.+... .+.+++.... .....++++++.+
T Consensus 2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~-~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~ 78 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP-DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIP 78 (239)
T ss_dssp EEEEEESSSSEEEEEEETT--SEEEEEEESSH-HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEES
T ss_pred CccCCCCCeeeEEEEEECC--cEEEEEEeCCC-CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEec
Confidence 4678999999999999864 47999987655 4456677888888777432 2445555332 3346799999999
Q ss_pred CCCHHH
Q 022401 103 GGELFE 108 (298)
Q Consensus 103 ~~sL~~ 108 (298)
|.++..
T Consensus 79 g~~~~~ 84 (239)
T PF01636_consen 79 GRPLDD 84 (239)
T ss_dssp SEEHHH
T ss_pred cccccc
Confidence 988776
No 462
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.24 E-value=1.9e-05 Score=65.68 Aligned_cols=76 Identities=12% Similarity=0.039 Sum_probs=52.3
Q ss_pred eeccCCe-EEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCC-CCCeeeeeEEEEeCCeEEEEEeccCCCCHH
Q 022401 30 DIGSGNF-GVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLR-HPNIVRFKEVILTPTHLAIVMEYASGGELF 107 (298)
Q Consensus 30 ~lg~g~~-~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~~~~~~~sL~ 107 (298)
.|..|.. ..||.+... +..+++|+..... .....+|+.+++.+. +--+.+++++...++..++|+++.+|.++.
T Consensus 5 ~~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~--~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~ 80 (244)
T cd05150 5 RVTEGQSGATVYRLDGK--NPGLYLKIAPSGP--TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAA 80 (244)
T ss_pred ecCCCCCcCeEEEEcCC--CCcEEEEecCCCc--ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHh
Confidence 4455555 688988764 3568888776543 345677888887773 334556777766666788999999998776
Q ss_pred HH
Q 022401 108 ER 109 (298)
Q Consensus 108 ~~ 109 (298)
..
T Consensus 81 ~~ 82 (244)
T cd05150 81 AL 82 (244)
T ss_pred Hh
Confidence 43
No 463
>PLN02876 acyl-CoA dehydrogenase
Probab=98.22 E-value=2.6e-05 Score=76.17 Aligned_cols=80 Identities=19% Similarity=0.213 Sum_probs=57.1
Q ss_pred EEeeeccCCeEEEEEEEEccCC--cEEEEEEeecCC--cchHHHHHHHHHHhcCC-CCCe--eeeeEEEEeC---CeEEE
Q 022401 27 FVRDIGSGNFGVARLMRDKVTK--ELVAVKYIERGD--KIDENVQREIINHRSLR-HPNI--VRFKEVILTP---THLAI 96 (298)
Q Consensus 27 ~~~~lg~g~~~~vy~~~~~~~~--~~~aiK~~~~~~--~~~~~~~~e~~~l~~l~-h~~i--~~~~~~~~~~---~~~~l 96 (298)
-++.++.|.+..+|.+.....+ ..+++|+..... .....+.+|..+++.+. |.++ .+++.++.+. +..|+
T Consensus 42 ~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~fl 121 (822)
T PLN02876 42 KVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFY 121 (822)
T ss_pred eEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceE
Confidence 3677888999999998765432 467888765433 22346789999999885 6665 6777777654 45789
Q ss_pred EEeccCCCCH
Q 022401 97 VMEYASGGEL 106 (298)
Q Consensus 97 v~~~~~~~sL 106 (298)
|||+++|..+
T Consensus 122 VME~v~G~~~ 131 (822)
T PLN02876 122 IMEYLEGRIF 131 (822)
T ss_pred EEEecCCccc
Confidence 9999988653
No 464
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=98.22 E-value=4.8e-05 Score=60.85 Aligned_cols=129 Identities=21% Similarity=0.187 Sum_probs=91.1
Q ss_pred eeeccCCeEEEEEEEEccCCcEEEEEEeecCC-----------------cchHHHHHHHHHHhcCC------CCCeeeee
Q 022401 29 RDIGSGNFGVARLMRDKVTKELVAVKYIERGD-----------------KIDENVQREIINHRSLR------HPNIVRFK 85 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~-----------------~~~~~~~~e~~~l~~l~------h~~i~~~~ 85 (298)
..||+|+.-.||.--+. ....||+..... ....+..+|+....++. +.+|.+++
T Consensus 7 ~~i~~G~~R~cy~HP~d---p~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~ 83 (199)
T PF10707_consen 7 DLIAQGGERDCYQHPDD---PNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY 83 (199)
T ss_pred cccccCCCceEEECCCC---CCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence 56899999999965443 235888876554 22345666776666665 78899999
Q ss_pred EEEEeCCeEEEEEeccC------CCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCC-
Q 022401 86 EVILTPTHLAIVMEYAS------GGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAP- 158 (298)
Q Consensus 86 ~~~~~~~~~~lv~~~~~------~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~- 158 (298)
|+.+.+....+|+|... .-||.+++.+. .++. .+ ...+-...++|-+.+|+.+|++|.||++......
T Consensus 84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~-~~~~-~~---~~~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~~~~ 158 (199)
T PF10707_consen 84 GFVETNLGLGLVVELIRDADGNISPTLEDYLKEG-GLTE-EL---RQALDEFKRYLLDHHIVIRDLNPHNIVVQRRDSGE 158 (199)
T ss_pred EEEecCCceEEEEEEEECCCCCcCccHHHHHHcC-CccH-HH---HHHHHHHHHHHHHcCCeecCCCcccEEEEecCCCc
Confidence 99999999999998773 24677777443 3555 33 3344455667789999999999999999654432
Q ss_pred -CEEEeec
Q 022401 159 -RLKICDF 165 (298)
Q Consensus 159 -~~~l~d~ 165 (298)
+++|+|-
T Consensus 159 ~~lvlIDG 166 (199)
T PF10707_consen 159 FRLVLIDG 166 (199)
T ss_pred eEEEEEeC
Confidence 4777773
No 465
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=98.14 E-value=0.00033 Score=55.81 Aligned_cols=130 Identities=20% Similarity=0.307 Sum_probs=89.5
Q ss_pred CCCCCCCCeeEEeeeccCCe-EEEEEEEEccCCcEEEEEEeec----C----------C--------cchHHHHHHHHHH
Q 022401 17 PIMHDSDRYDFVRDIGSGNF-GVARLMRDKVTKELVAVKYIER----G----------D--------KIDENVQREIINH 73 (298)
Q Consensus 17 ~~~~~~~~y~~~~~lg~g~~-~~vy~~~~~~~~~~~aiK~~~~----~----------~--------~~~~~~~~e~~~l 73 (298)
|...-..+++.++.||.|.. |.||+++-. |+.||+|.+.. . . ...+-|..|-...
T Consensus 31 ~F~~h~~~I~flefLg~g~~~~~V~kv~I~--g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAf 108 (207)
T PF13095_consen 31 PFTHHGDDIEFLEFLGHGSHDGYVFKVEID--GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAF 108 (207)
T ss_pred CcCCCCCcEeeeeecCCCCceeEEEEEEEC--CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhh
Confidence 33334589999999999999 999999885 67999999431 0 0 1112355677766
Q ss_pred hcCC---CCCe--eeeeEEEEeC------------------CeEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHH
Q 022401 74 RSLR---HPNI--VRFKEVILTP------------------THLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS 130 (298)
Q Consensus 74 ~~l~---h~~i--~~~~~~~~~~------------------~~~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~ 130 (298)
-+|+ +.++ ++++|+..-. -...+|.|+.+... .++...+. ++.+
T Consensus 109 gRLke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~---------~~~~~~~~----~~~~ 175 (207)
T PF13095_consen 109 GRLKEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP---------PLQIRDIP----QMLR 175 (207)
T ss_pred HHHHhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc---------ccchhHHH----HHHH
Confidence 6664 4566 8999997422 12467888775533 23344444 4555
Q ss_pred HHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCcc
Q 022401 131 GVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYS 168 (298)
Q Consensus 131 ~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~ 168 (298)
-+..+|..||+-+|+++.|.. + =+|+||+.+
T Consensus 176 dl~~~~k~gI~~~Dv~~~ny~----~---G~lvDfs~~ 206 (207)
T PF13095_consen 176 DLKILHKLGIVPRDVKPRNYR----G---GKLVDFSSS 206 (207)
T ss_pred HHHHHHHCCeeeccCcccccc----C---CEEEecccC
Confidence 566699999999999999986 2 378999853
No 466
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.10 E-value=3.6e-05 Score=70.16 Aligned_cols=137 Identities=18% Similarity=0.180 Sum_probs=84.6
Q ss_pred eeeccCCeEEEEEEEEccCCcEEEEEEeecCCcch--------------------------------HH------HHHHH
Q 022401 29 RDIGSGNFGVARLMRDKVTKELVAVKYIERGDKID--------------------------------EN------VQREI 70 (298)
Q Consensus 29 ~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~--------------------------------~~------~~~e~ 70 (298)
+.|+..+.+.|+.|+-+. |+.||||+...+-+.. +. |.+|.
T Consensus 167 ~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA 245 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA 245 (538)
T ss_pred chhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence 568888999999999985 8899999865321110 01 22222
Q ss_pred HHH----hcCCCCC------eeeeeEEEEeCCeEEEEEeccCCCCHHHHHH-hCCCCCHHHHHHHHHHHHHH-HHHHhhc
Q 022401 71 INH----RSLRHPN------IVRFKEVILTPTHLAIVMEYASGGELFERIC-NAGRFSEDEARFFFQQLISG-VSYCHAM 138 (298)
Q Consensus 71 ~~l----~~l~h~~------i~~~~~~~~~~~~~~lv~~~~~~~sL~~~l~-~~~~~~~~~~~~i~~~l~~~-l~~Lh~~ 138 (298)
+-. +.+.|-+ |.+++ ........++|||++|..+.+.-. ....++...+ +..+.++ ++.+=..
T Consensus 246 ~Nae~~~~~f~~~~~~~~V~VP~Vy--~~~st~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i---~~~l~~~~~~qIf~~ 320 (538)
T KOG1235|consen 246 KNAERFRENFKDFSLLTYVLVPKVY--WDLSTKRVLTMEYVDGIKINDLDAIDKRGISPHDI---LNKLVEAYLEQIFKT 320 (538)
T ss_pred HhHHHHHHHHHhcccccceeCCeeh--hhcCcceEEEEEecCCccCCCHHHHHHcCCCHHHH---HHHHHHHHHHHHHhc
Confidence 222 2223444 22221 223456789999999987766532 1223455433 3333332 1233368
Q ss_pred CcEEecCCCCceEeeCC--CCCCEEEeecCccccc
Q 022401 139 QVCHRDLKLENTLLDGS--PAPRLKICDFGYSKSS 171 (298)
Q Consensus 139 ~i~H~dl~p~nilv~~~--~~~~~~l~d~~~~~~~ 171 (298)
|++|+|-+|-||+++.+ +..++.+.|+|+....
T Consensus 321 GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~i 355 (538)
T KOG1235|consen 321 GFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVI 355 (538)
T ss_pred CCccCCCCCCcEEEecCCCCCccEEEEcccccccc
Confidence 89999999999999853 3557999999987643
No 467
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.03 E-value=3.7e-05 Score=63.63 Aligned_cols=72 Identities=11% Similarity=-0.011 Sum_probs=44.6
Q ss_pred eeeccCCeE-EEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCC---CeeeeeEEEEeC---CeEEEEEecc
Q 022401 29 RDIGSGNFG-VARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHP---NIVRFKEVILTP---THLAIVMEYA 101 (298)
Q Consensus 29 ~~lg~g~~~-~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~~---~~~~lv~~~~ 101 (298)
+.++.|+.. .||.+. ..+++|.... ......+.+|...++.+... -+.++++..... ...+++|+++
T Consensus 3 ~~~~~gG~~n~vy~~~-----~~~VlR~~~~-~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i 76 (235)
T cd05155 3 EPVDSGGTDNATFRLG-----DDMSVRLPSA-AGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWL 76 (235)
T ss_pred eeccCCCcccceEEcC-----CceEEEcCCc-cchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEee
Confidence 567777776 588762 2478886554 33345788899888877532 233333333222 2347899999
Q ss_pred CCCCH
Q 022401 102 SGGEL 106 (298)
Q Consensus 102 ~~~sL 106 (298)
+|.++
T Consensus 77 ~G~~l 81 (235)
T cd05155 77 EGETA 81 (235)
T ss_pred cCCCC
Confidence 98776
No 468
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.98 E-value=0.00011 Score=60.59 Aligned_cols=75 Identities=15% Similarity=0.257 Sum_probs=47.8
Q ss_pred EeeeccCCeEEEEEEEEcc-CCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCee-eeeEEEEeCCeEEEEEeccCCCC
Q 022401 28 VRDIGSGNFGVARLMRDKV-TKELVAVKYIERGDKIDENVQREIINHRSLRHPNIV-RFKEVILTPTHLAIVMEYASGGE 105 (298)
Q Consensus 28 ~~~lg~g~~~~vy~~~~~~-~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~lv~~~~~~~s 105 (298)
++.|..|-...+|++.... .+..|++|+........-...+|..+++.+...++. +++... +. .+++||++|.+
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl~P~v~~~~--~~--~~l~e~i~G~~ 78 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKHGLAPKLYATF--QN--GLIYEFIPGRT 78 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhCCCCCeEEEEe--CC--cEEEEeeCCCc
Confidence 4667777778999887543 256788997765433323345788888887544443 343332 22 37999998876
Q ss_pred H
Q 022401 106 L 106 (298)
Q Consensus 106 L 106 (298)
+
T Consensus 79 l 79 (235)
T cd05157 79 L 79 (235)
T ss_pred C
Confidence 5
No 469
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.89 E-value=6.9e-06 Score=69.39 Aligned_cols=130 Identities=15% Similarity=0.157 Sum_probs=89.7
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcc-----------------h------HHHHHHHHHHhcCCCCC
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKI-----------------D------ENVQREIINHRSLRHPN 80 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~-----------------~------~~~~~e~~~l~~l~h~~ 80 (298)
-+.+++.||-|.-+.||.+.+. .|+..++|.=..+... . -...+|...++.|....
T Consensus 93 v~svGnqIGVGKESDIY~v~d~-~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~g 171 (465)
T KOG2268|consen 93 VESVGNQIGVGKESDIYVVADE-EGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERG 171 (465)
T ss_pred hhhhccccccccccceEEEecC-CCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcC
Confidence 3678899999999999999886 5778899853221100 0 11235677777664322
Q ss_pred --eeeeeEEEEeCCeEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCC
Q 022401 81 --IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAP 158 (298)
Q Consensus 81 --i~~~~~~~~~~~~~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~ 158 (298)
+.+.+ +.+.-++||+...|.+|...-.-. + ...+...+...|-.|-.+|++|||.+--||++..++.
T Consensus 172 fpVPkpi----D~~RH~Vvmelv~g~Pl~~v~~v~---d---~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~dd~~- 240 (465)
T KOG2268|consen 172 FPVPKPI----DHNRHCVVMELVDGYPLRQVRHVE---D---PPTLYDDLMGLIVRLANHGLIHGDFNEFNIMVKDDDK- 240 (465)
T ss_pred CCCCCcc----cccceeeHHHhhcccceeeeeecC---C---hHHHHHHHHHHHHHHHHcCceecccchheeEEecCCC-
Confidence 22332 345778999999998886554221 2 2334445555666788999999999999999998776
Q ss_pred CEEEeecC
Q 022401 159 RLKICDFG 166 (298)
Q Consensus 159 ~~~l~d~~ 166 (298)
++++||-
T Consensus 241 -i~vIDFP 247 (465)
T KOG2268|consen 241 -IVVIDFP 247 (465)
T ss_pred -EEEeech
Confidence 9999996
No 470
>PRK10593 hypothetical protein; Provisional
Probab=97.85 E-value=0.00051 Score=58.88 Aligned_cols=80 Identities=13% Similarity=0.057 Sum_probs=57.0
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCC---CCeeeeeEEEEe---CCeEEEE
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRH---PNIVRFKEVILT---PTHLAIV 97 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~---~~~~~lv 97 (298)
+..-.+.||.|..+.||..... ++ .+++|... .......+..|...++.+.. -.+.++++++.. .+..++|
T Consensus 15 ~~~~~~~i~~G~~~~vy~~~~~-~~-~~~~k~~~-~~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LV 91 (297)
T PRK10593 15 KLSRVECISEQPYAALWALYDS-QG-NPMPLMAR-SFSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLL 91 (297)
T ss_pred hhheeeecCCccceeEEEEEcC-CC-CEEEEEec-ccccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEE
Confidence 3455678999999999998654 23 47778743 32234678889999988843 356777777654 3568999
Q ss_pred EeccCCCCH
Q 022401 98 MEYASGGEL 106 (298)
Q Consensus 98 ~~~~~~~sL 106 (298)
||+.+|.++
T Consensus 92 mE~i~G~~~ 100 (297)
T PRK10593 92 LERLRGVSV 100 (297)
T ss_pred EeccCCEec
Confidence 999988654
No 471
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.81 E-value=0.00014 Score=61.00 Aligned_cols=130 Identities=14% Similarity=0.107 Sum_probs=73.5
Q ss_pred eccCCeEEEEEEEEccCCcEEEEEEeecCCcch-HHHHHHHHHHhcCCCCCee-eeeEEEEeCCeEEEEEeccCCCCHHH
Q 022401 31 IGSGNFGVARLMRDKVTKELVAVKYIERGDKID-ENVQREIINHRSLRHPNIV-RFKEVILTPTHLAIVMEYASGGELFE 108 (298)
Q Consensus 31 lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~lv~~~~~~~sL~~ 108 (298)
+..|-...+|++.. ++..+++|......... -...+|..+++.+...++. +++... . -++|++|++|.++..
T Consensus 4 ~~~G~tn~~y~~~~--~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~--~--~~~v~e~i~G~~~~~ 77 (256)
T TIGR02721 4 LSGGLTNRSWRIEH--PGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVN--E--HWLLVEWLEGEVITL 77 (256)
T ss_pred CCCcCcCCeEEEEe--CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEe--C--CEEEEEeccCccccc
Confidence 45566678888863 46678899765443221 2357788888888543332 333332 2 257999998866532
Q ss_pred H-----------------HHhCC----CCCHH-HHHHHHHHH---------HHHHHHHhh--------cCcEEecCCCCc
Q 022401 109 R-----------------ICNAG----RFSED-EARFFFQQL---------ISGVSYCHA--------MQVCHRDLKLEN 149 (298)
Q Consensus 109 ~-----------------l~~~~----~~~~~-~~~~i~~~l---------~~~l~~Lh~--------~~i~H~dl~p~n 149 (298)
. ++..+ +++.. .+..+..++ ...+..+.. ..++|+|+.|.|
T Consensus 78 ~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~N 157 (256)
T TIGR02721 78 DQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYN 157 (256)
T ss_pred ccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCc
Confidence 1 11111 11211 111111111 111222221 248999999999
Q ss_pred eEeeCCCCCCEEEeecCccc
Q 022401 150 TLLDGSPAPRLKICDFGYSK 169 (298)
Q Consensus 150 ilv~~~~~~~~~l~d~~~~~ 169 (298)
|++++++ +.++||+.+.
T Consensus 158 il~~~~~---~~lIDwE~a~ 174 (256)
T TIGR02721 158 LVVTPQG---LKLIDWEYAS 174 (256)
T ss_pred EEEeCCC---CEEEeccccC
Confidence 9998765 6899998664
No 472
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.78 E-value=0.0014 Score=58.17 Aligned_cols=76 Identities=18% Similarity=0.095 Sum_probs=53.0
Q ss_pred EeeeccCCeEEEEEEEEccCCcEEEEEEeecC--------CcchHHHHHHHHHHhcCC---CCCeeeeeEEEEeCCeEEE
Q 022401 28 VRDIGSGNFGVARLMRDKVTKELVAVKYIERG--------DKIDENVQREIINHRSLR---HPNIVRFKEVILTPTHLAI 96 (298)
Q Consensus 28 ~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~--------~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~l 96 (298)
.+.||.|.+..||.+.....++.++||+-... ....++...|.+.|+.+. ...+.+++.+ ++...++
T Consensus 31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~l 108 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVT 108 (401)
T ss_pred eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEE
Confidence 46789999999999998644457999985311 123456677888887762 2345666665 5566789
Q ss_pred EEeccCCCC
Q 022401 97 VMEYASGGE 105 (298)
Q Consensus 97 v~~~~~~~s 105 (298)
|||++++..
T Consensus 109 VME~L~~~~ 117 (401)
T PRK09550 109 VMEDLSDHK 117 (401)
T ss_pred EEecCCCcc
Confidence 999987643
No 473
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=97.76 E-value=5.6e-06 Score=75.43 Aligned_cols=238 Identities=20% Similarity=0.206 Sum_probs=148.3
Q ss_pred CeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCC-eeeeeEEEEeCCeEEEEEeccC
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHPN-IVRFKEVILTPTHLAIVMEYAS 102 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~~~~lv~~~~~ 102 (298)
.+......+.++++.+++.+...+.-. ..+.+... ....-++++|.+.+||| .+.-.+-+..+....++++++.
T Consensus 243 ws~~fh~fvK~altknpKkRptaeklL-~h~fvs~~----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s 317 (829)
T KOG0576|consen 243 WSEFFHNFVKGALTKNPKKRPTAEKLL-QHPFVSQT----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICS 317 (829)
T ss_pred chHHHHHHHHHHhcCCCccCCChhhhe-eceeeccc----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhc
Confidence 456667788899999999888755443 35544433 44566889999999999 4444444445567788999987
Q ss_pred CC-CHHHHH-HhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEecCCCCceEeeCCCCCCEEEeecCccccccCCCCCCCC
Q 022401 103 GG-ELFERI-CNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST 180 (298)
Q Consensus 103 ~~-sL~~~l-~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~~~~ 180 (298)
++ +-.... .....+...+...+.+.-.+++++||+.--+|+| ||+..+.. .+..+++..............
T Consensus 318 ~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~~~---~~~~~~~v~~~L~~~~~~~t~ 390 (829)
T KOG0576|consen 318 TGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGSEEE---VKLLDFAVPPQLTRTMKPRTA 390 (829)
T ss_pred CCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----cccccccc---cccccccCCcccCcccccccC
Confidence 65 221111 0111233445555667777889999988667887 67665433 688999977644444455677
Q ss_pred CCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCCCCCchhHHHHHHHHhhcC--CCCCCCCCCCHHHH-HH
Q 022401 181 VGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFEDPDEPKDFRKTIQRILSVQ--YSVPDTNPISQECR-DL 257 (298)
Q Consensus 181 ~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~-~l 257 (298)
.+++.+++||....+.+... .|.|++|.-..++.-|..|-...... ...+..+. +.+.....++.-.. ++
T Consensus 391 ~~~~~~~~pev~~~~~~~~~-p~~~~~~~~~~~~ap~~pPr~~P~~~------~~~~g~~p~s~~L~~~~aw~~~~~~~~ 463 (829)
T KOG0576|consen 391 IGTPEPLAPEVIQENTIDGC-PDSGSLAVSAIQMAPGLPPRSSPPAV------LPMIGNGPNSPMLTDKSAWSPVFHRDF 463 (829)
T ss_pred CCCCCCCCchhhcccccccC-CCccCCCcchhhcCCCCCCCCCCccc------cCCCCCCCCccccchhhhcCcccccCC
Confidence 78999999999888888777 89999998666777666653321100 00000000 00000001111122 36
Q ss_pred HHHhhhhCCCCcccccccchhhh
Q 022401 258 ISRIFVADPAAVSIFFFPLNMSC 280 (298)
Q Consensus 258 i~~~l~~dp~~Rps~~~~l~~~~ 280 (298)
...|+..-|..|+....++.+..
T Consensus 464 ~~~~~~g~P~~pkv~mgacfsKv 486 (829)
T KOG0576|consen 464 PAPCLNGLPPTPKVHMGACFSKV 486 (829)
T ss_pred cccccCCCCCCCcchhhHHHHHH
Confidence 66778888888887766665443
No 474
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.65 E-value=0.00078 Score=57.69 Aligned_cols=137 Identities=16% Similarity=0.068 Sum_probs=79.4
Q ss_pred EEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCC--eeeeeEE------EEeCCeEEEEE
Q 022401 27 FVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHPN--IVRFKEV------ILTPTHLAIVM 98 (298)
Q Consensus 27 ~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~--i~~~~~~------~~~~~~~~lv~ 98 (298)
-++.+..|....+|.+... +..+++|++.. ........|..+++.+...+ +.+++.. ...++..++++
T Consensus 18 ~i~~i~~G~~n~~y~v~~~--~~~~vLr~~~~--~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~ 93 (296)
T cd05153 18 SFEGISAGIENTNYFVTTD--SGRYVLTLFEK--VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALV 93 (296)
T ss_pred heecccCccccceEEEEeC--CCcEEEEEcCC--CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEE
Confidence 3667777877899988653 34689998764 23455666777777664322 3333331 12345678999
Q ss_pred eccCCCCHHH----HH----------Hh---CCCC-----CHHH-H------------HHHHHHHHHHHHHHhh------
Q 022401 99 EYASGGELFE----RI----------CN---AGRF-----SEDE-A------------RFFFQQLISGVSYCHA------ 137 (298)
Q Consensus 99 ~~~~~~sL~~----~l----------~~---~~~~-----~~~~-~------------~~i~~~l~~~l~~Lh~------ 137 (298)
++.+|.++.. .. +. .... .... . ......+..++..+.+
T Consensus 94 ~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~ 173 (296)
T cd05153 94 EFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDL 173 (296)
T ss_pred EeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcC
Confidence 9998866521 10 10 0000 0000 0 0011112233444442
Q ss_pred -cCcEEecCCCCceEeeCCCCCCEEEeecCccc
Q 022401 138 -MQVCHRDLKLENTLLDGSPAPRLKICDFGYSK 169 (298)
Q Consensus 138 -~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~ 169 (298)
.+++|+|++|.||++++++. +.|.||+.+.
T Consensus 174 ~~~l~HgD~~~~Nil~~~~~~--~~iIDfe~a~ 204 (296)
T cd05153 174 PRGVIHADLFRDNVLFDGDEL--SGVIDFYFAC 204 (296)
T ss_pred CCcCCccCcCcccEEEeCCce--EEEeehhhhc
Confidence 46999999999999987654 6799998654
No 475
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.64 E-value=0.00028 Score=56.17 Aligned_cols=97 Identities=14% Similarity=0.078 Sum_probs=76.3
Q ss_pred HHHHHHHhcCCC-CCeeeeeEEEEeCCeEEEEEeccCCCCHHH---HHHhCCCCCHHHHHHHHHHHHHHHHHHhh---cC
Q 022401 67 QREIINHRSLRH-PNIVRFKEVILTPTHLAIVMEYASGGELFE---RICNAGRFSEDEARFFFQQLISGVSYCHA---MQ 139 (298)
Q Consensus 67 ~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~~~~~~~sL~~---~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~---~~ 139 (298)
.+|..+++.+++ +++.+++|+| .-+++.|+...+++.. .+.+....+...+..++.+++..+.+|+. ..
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~C----G~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~ 82 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSC----GRFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGF 82 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeEC----CCEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 357788888876 6999999998 3355778887665532 12233345788999999999999999987 34
Q ss_pred cEEecCCCCceEeeCCCCCCEEEeecCccc
Q 022401 140 VCHRDLKLENTLLDGSPAPRLKICDFGYSK 169 (298)
Q Consensus 140 i~H~dl~p~nilv~~~~~~~~~l~d~~~~~ 169 (298)
+.-+|++++|+-+++++. +|+.|.+.+.
T Consensus 83 ~~lcDv~~~nfgv~~~~~--lk~iDld~v~ 110 (188)
T PF12260_consen 83 FYLCDVSPDNFGVNDDGR--LKLIDLDDVF 110 (188)
T ss_pred EEEeecchHHeEEeCCCc--EEEEechhcc
Confidence 889999999999998877 9999999764
No 476
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.63 E-value=0.0006 Score=58.62 Aligned_cols=76 Identities=13% Similarity=0.144 Sum_probs=47.6
Q ss_pred EeeeccCCeEEEEEEEEcc------CCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCe-eeeeEEEEeCCeEEEEEec
Q 022401 28 VRDIGSGNFGVARLMRDKV------TKELVAVKYIERGDKIDENVQREIINHRSLRHPNI-VRFKEVILTPTHLAIVMEY 100 (298)
Q Consensus 28 ~~~lg~g~~~~vy~~~~~~------~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~~~ 100 (298)
++.+..|-...+|++.... .++.+++|+............+|..+++.+...++ .++++++. + ..|++|
T Consensus 3 i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~--~--~~v~e~ 78 (302)
T cd05156 3 VSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSERNLGPKLYGIFP--N--GRIEEF 78 (302)
T ss_pred EEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhCCCCCceEEEeC--C--Cchhhe
Confidence 3455556666888887643 25789999877654444556778888887754333 34444442 2 247888
Q ss_pred cCCCCHH
Q 022401 101 ASGGELF 107 (298)
Q Consensus 101 ~~~~sL~ 107 (298)
++|.++.
T Consensus 79 i~G~~l~ 85 (302)
T cd05156 79 IPSRTLT 85 (302)
T ss_pred eCCCcCC
Confidence 8876653
No 477
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.44 E-value=0.0014 Score=56.84 Aligned_cols=136 Identities=18% Similarity=0.191 Sum_probs=87.2
Q ss_pred eEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCC-----------------------cch----HHHHHHHHHHhcCCC
Q 022401 26 DFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGD-----------------------KID----ENVQREIINHRSLRH 78 (298)
Q Consensus 26 ~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~-----------------------~~~----~~~~~e~~~l~~l~h 78 (298)
.+-..|..|.-+.||.|... +|..+|||++..+- ... -...+|+.-|.++..
T Consensus 147 ~inGCiSTGKEANVYHat~~-dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~ 225 (520)
T KOG2270|consen 147 EINGCISTGKEANVYHATEE-DGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNN 225 (520)
T ss_pred ecccccccCccceeEeeecC-CCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHh
Confidence 34567888999999998876 57779999875210 000 112356777777754
Q ss_pred CCeeeeeEEEEeCCeEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHH-hhcCcEEecCCCCceEeeCCCC
Q 022401 79 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYC-HAMQVCHRDLKLENTLLDGSPA 157 (298)
Q Consensus 79 ~~i~~~~~~~~~~~~~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~L-h~~~i~H~dl~p~nilv~~~~~ 157 (298)
.+|.-..-+.. ..-.+||+++....-..-.-....++...+..+-.+++.-+.-| |.+++||.||+=-|+|+-.+.
T Consensus 226 aGIP~PePIlL--k~hVLVM~FlGrdgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~LyhdG~- 302 (520)
T KOG2270|consen 226 AGIPCPEPILL--KNHVLVMEFLGRDGWAAPKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLYHDGK- 302 (520)
T ss_pred cCCCCCCceee--ecceEeeeeccCCCCcCcccccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheEECCE-
Confidence 44322222211 12357889885322211111334567777777777888777777 578999999999999997443
Q ss_pred CCEEEeecCc
Q 022401 158 PRLKICDFGY 167 (298)
Q Consensus 158 ~~~~l~d~~~ 167 (298)
++++|.+=
T Consensus 303 --lyiIDVSQ 310 (520)
T KOG2270|consen 303 --LYIIDVSQ 310 (520)
T ss_pred --EEEEEccc
Confidence 89999863
No 478
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.29 E-value=0.0063 Score=52.45 Aligned_cols=140 Identities=17% Similarity=0.156 Sum_probs=79.0
Q ss_pred eeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCC--eeeeeEE------EEeCCeEEE
Q 022401 25 YDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHPN--IVRFKEV------ILTPTHLAI 96 (298)
Q Consensus 25 y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~--i~~~~~~------~~~~~~~~l 96 (298)
..-++.++.|....+|.+... ++ .+++|+..... .......|.++++.|...+ +.+++.. ....+..++
T Consensus 24 ~~~i~~~~~G~~n~~y~v~t~-~~-~~vLK~~~~~~-~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~ 100 (307)
T TIGR00938 24 LLSLKGIAEGVENSNYLLTTD-VG-RYILTLYEKRV-KAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPAC 100 (307)
T ss_pred ceeccccCCccccceEEEEeC-CC-cEEEEEecCCC-CHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEE
Confidence 444667777777899988753 34 58889765432 2334455666666663222 2333321 112456789
Q ss_pred EEeccCCCCHH-----------HHH---HhC-CCC--------CHHHH-----H----------HHHHHHHHHHHHHh--
Q 022401 97 VMEYASGGELF-----------ERI---CNA-GRF--------SEDEA-----R----------FFFQQLISGVSYCH-- 136 (298)
Q Consensus 97 v~~~~~~~sL~-----------~~l---~~~-~~~--------~~~~~-----~----------~i~~~l~~~l~~Lh-- 136 (298)
++++++|.++. ..+ +.. ..+ ..... . .....+...++++.
T Consensus 101 l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~ 180 (307)
T TIGR00938 101 LVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKF 180 (307)
T ss_pred EEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhh
Confidence 99999885431 111 110 000 00100 0 00112333455553
Q ss_pred -----hcCcEEecCCCCceEeeCCCCCCEEEeecCccc
Q 022401 137 -----AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK 169 (298)
Q Consensus 137 -----~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~ 169 (298)
..+++|+|+++.|++++.++. +.+.||+.+.
T Consensus 181 ~~~~~~~~l~HgD~~~~Nvl~~~~~~--~~vIDfd~~~ 216 (307)
T TIGR00938 181 WPRDLPRGVIHADLFPDNVLFDGDSV--KGVIDFYFAC 216 (307)
T ss_pred hhhcCCCccCCCCCCcCcEEEECCce--EEEeeccccc
Confidence 267999999999999987764 6899998654
No 479
>PRK05231 homoserine kinase; Provisional
Probab=97.27 E-value=0.0042 Score=53.84 Aligned_cols=75 Identities=13% Similarity=0.077 Sum_probs=42.4
Q ss_pred EeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcC-----CCCCeeeee---EEEEeCCeEEEEEe
Q 022401 28 VRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSL-----RHPNIVRFK---EVILTPTHLAIVME 99 (298)
Q Consensus 28 ~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~---~~~~~~~~~~lv~~ 99 (298)
.+.++.|....+|.+... +| .+++|++.. ...+....+...++.| ..|.+++-. .+....+..+++++
T Consensus 27 ~~~l~~G~~n~~y~v~t~-~g-~~vLK~~~~--~~~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~ 102 (319)
T PRK05231 27 LKGIAEGIENSNFFLTTT-QG-EYVLTLFER--LTAEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVT 102 (319)
T ss_pred cchhccccccceEEEEeC-CC-cEEEEEecc--CChHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEE
Confidence 455667777789988764 33 589998762 1223333444444444 233333210 01123456789999
Q ss_pred ccCCCCH
Q 022401 100 YASGGEL 106 (298)
Q Consensus 100 ~~~~~sL 106 (298)
+.+|..+
T Consensus 103 ~l~G~~~ 109 (319)
T PRK05231 103 FLEGKWP 109 (319)
T ss_pred ecCCCCC
Confidence 9988643
No 480
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=97.24 E-value=0.0087 Score=52.24 Aligned_cols=72 Identities=19% Similarity=0.164 Sum_probs=47.3
Q ss_pred eeccCCeEEEEEEEEccCCcEEEEEEeec-----C---CcchHHHHHHHHHHhcCC--CCC-eeeeeEEEEeCCeEEEEE
Q 022401 30 DIGSGNFGVARLMRDKVTKELVAVKYIER-----G---DKIDENVQREIINHRSLR--HPN-IVRFKEVILTPTHLAIVM 98 (298)
Q Consensus 30 ~lg~g~~~~vy~~~~~~~~~~~aiK~~~~-----~---~~~~~~~~~e~~~l~~l~--h~~-i~~~~~~~~~~~~~~lv~ 98 (298)
.+|.|....||.+.....++.++||+-.. + +...++..-|...|+... .|. +.+++.+ ++....+||
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~--D~e~~~~vM 79 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHF--DTEMAVTVM 79 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEE--ccccceehH
Confidence 47999999999999864446799997532 1 233345556777776653 354 4444433 666677899
Q ss_pred eccCC
Q 022401 99 EYASG 103 (298)
Q Consensus 99 ~~~~~ 103 (298)
|+.+.
T Consensus 80 EdL~~ 84 (370)
T TIGR01767 80 EDLSH 84 (370)
T ss_pred hhCcc
Confidence 98854
No 481
>PLN02236 choline kinase
Probab=97.12 E-value=0.006 Score=53.48 Aligned_cols=141 Identities=16% Similarity=0.206 Sum_probs=79.0
Q ss_pred CCeeEEeeeccCCeEEEEEEEEcc----CCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCee-eeeEEEEeCCeEEEE
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKV----TKELVAVKYIERGDKIDENVQREIINHRSLRHPNIV-RFKEVILTPTHLAIV 97 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~----~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~lv 97 (298)
+...+. .+..|-...+|++.... .++.+++|+........-...+|..+++.+..-++- ++++.+.. . .|
T Consensus 37 ~~~~i~-~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR~~E~~~~~~l~~~gl~P~~~~~~~~-g---~v 111 (344)
T PLN02236 37 EALQVI-PLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDRDDEIRTFECMSRHGQGPRLLGRFPN-G---RV 111 (344)
T ss_pred CcEEEE-EcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeechHHHHHHHHHHHHcCCCCceEEEECC-c---eE
Confidence 344444 55557777999987432 246799998866543333346788888888554443 44455422 2 47
Q ss_pred EeccCCCCHHHH----------H-------HhCC-C----CC-HHHHHHHHHH-----------------HHHHHHHH--
Q 022401 98 MEYASGGELFER----------I-------CNAG-R----FS-EDEARFFFQQ-----------------LISGVSYC-- 135 (298)
Q Consensus 98 ~~~~~~~sL~~~----------l-------~~~~-~----~~-~~~~~~i~~~-----------------l~~~l~~L-- 135 (298)
.+|+++.++... + +... + .+ ...+..++.+ +...+..|
T Consensus 112 ~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~ 191 (344)
T PLN02236 112 EEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEK 191 (344)
T ss_pred EEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHH
Confidence 888877665321 0 1111 0 11 1222222211 11112222
Q ss_pred --h----hcCcEEecCCCCceEeeCCCCCCEEEeecCccc
Q 022401 136 --H----AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK 169 (298)
Q Consensus 136 --h----~~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~ 169 (298)
. ...++|+|+++.||++++.+ ..+.++||..+.
T Consensus 192 ~~~~~~~~~~~cH~Dl~~~Nil~~~~~-~~~~lID~Eya~ 230 (344)
T PLN02236 192 ELSGDDQEIGFCHNDLQYGNIMIDEET-RAITIIDYEYAS 230 (344)
T ss_pred HhcccCCCceEEeCCCCcCcEEEeCCC-CcEEEEeehhcc
Confidence 1 23589999999999998532 239999998764
No 482
>PRK12396 5-methylribose kinase; Reviewed
Probab=97.04 E-value=0.0063 Score=53.77 Aligned_cols=78 Identities=18% Similarity=0.140 Sum_probs=51.5
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccCCcEEEEEEeec----C---CcchHHHHHHHHHHhcCC--CCC-eeeeeEEEEeCC
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVTKELVAVKYIER----G---DKIDENVQREIINHRSLR--HPN-IVRFKEVILTPT 92 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~----~---~~~~~~~~~e~~~l~~l~--h~~-i~~~~~~~~~~~ 92 (298)
+.++ .+.||.|....||.+.+...++.++||+-.. . +...++..-|.+.|+.+. .|. +.+++.+ ++.
T Consensus 30 ~~~~-~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~--D~e 106 (409)
T PRK12396 30 KGLQ-CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF--DSV 106 (409)
T ss_pred ccce-eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE--CcH
Confidence 3444 6788999999999999843356799997532 1 223355666777777663 354 4445443 666
Q ss_pred eEEEEEeccCC
Q 022401 93 HLAIVMEYASG 103 (298)
Q Consensus 93 ~~~lv~~~~~~ 103 (298)
...+|||+++.
T Consensus 107 ~~~~vMEdL~~ 117 (409)
T PRK12396 107 MNCCVMEDLSD 117 (409)
T ss_pred HhhHHHHhCcc
Confidence 66778888854
No 483
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=97.04 E-value=0.0065 Score=52.96 Aligned_cols=79 Identities=14% Similarity=0.175 Sum_probs=47.2
Q ss_pred CCeeEEeeeccCCeEEEEEEEEccC---CcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCee-eeeEEEEeCCeEEEEE
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKVT---KELVAVKYIERGDKIDENVQREIINHRSLRHPNIV-RFKEVILTPTHLAIVM 98 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~~---~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~lv~ 98 (298)
+..++.. +..|=...+|++..... +..|++|+........-...+|..+++.+..-++- ++++++ . +. +|.
T Consensus 15 ~~i~i~~-l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~IdR~~E~~il~~l~~~gl~P~~l~~~-~-~G--~i~ 89 (330)
T PLN02421 15 SDFSVER-ISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDYVIDRERELQAIKYLSAAGFGAKLLGVF-G-NG--MIQ 89 (330)
T ss_pred CceEEEE-eCCcccceEEEEEecCCCCCCceEEEEEecCCcCeEechHHHHHHHHHHHhcCCCCceeEEe-C-Cc--Eee
Confidence 3444444 44466668888865432 33789998765543333346788888888655543 455554 2 22 478
Q ss_pred eccCCCCH
Q 022401 99 EYASGGEL 106 (298)
Q Consensus 99 ~~~~~~sL 106 (298)
+|+++.++
T Consensus 90 ~fi~g~~l 97 (330)
T PLN02421 90 SFINARTL 97 (330)
T ss_pred hhhcCCCC
Confidence 88877655
No 484
>PLN02756 S-methyl-5-thioribose kinase
Probab=97.00 E-value=0.022 Score=50.74 Aligned_cols=73 Identities=16% Similarity=0.180 Sum_probs=48.9
Q ss_pred EEeeeccCCeEEEEEEEEccCCcEEEEEEeec-----CC---cchHHHHHHHHHHhcCC---CCCeeeeeEEEEeCCeEE
Q 022401 27 FVRDIGSGNFGVARLMRDKVTKELVAVKYIER-----GD---KIDENVQREIINHRSLR---HPNIVRFKEVILTPTHLA 95 (298)
Q Consensus 27 ~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~-----~~---~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~ 95 (298)
-.+.+|.|....||.+.+. ++.++||+-.. +. ....+...|...|+.+. ...+.+++.++. ..-+
T Consensus 36 ~~~eiggGn~N~VyrV~~~--~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~v 111 (418)
T PLN02756 36 KIKEVGDGNLNFVYIVVSS--SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMAL 111 (418)
T ss_pred eEEEcCCCceeeEEEEEcC--CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCE
Confidence 4778899999999999874 44699998652 11 12334445566666553 246777877765 4456
Q ss_pred EEEeccCC
Q 022401 96 IVMEYASG 103 (298)
Q Consensus 96 lv~~~~~~ 103 (298)
++||++++
T Consensus 112 lvME~L~~ 119 (418)
T PLN02756 112 IGMRYLEP 119 (418)
T ss_pred EEEeecCC
Confidence 68999966
No 485
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=96.76 E-value=0.018 Score=49.03 Aligned_cols=76 Identities=11% Similarity=0.065 Sum_probs=48.0
Q ss_pred eeEEeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCC---CCCeeeeeEEEEeCCeEEEEEecc
Q 022401 25 YDFVRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLR---HPNIVRFKEVILTPTHLAIVMEYA 101 (298)
Q Consensus 25 y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~~~~ 101 (298)
.+-.+.++.|....+|.+. .+++.+.+|+-. ......+..|..-|+.|. .-.+.+++++....+.-++++||.
T Consensus 19 i~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~--~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l 94 (288)
T PF03881_consen 19 ITSIEPVSGGDINEAYRLD--TDGGSYFVKVNS--ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFL 94 (288)
T ss_dssp --EEEEE--SSSSEEEEEE--TTS-EEEEEEEE--GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE--
T ss_pred eeeeEecCCCChhheEEEE--CCCccEEEEecC--hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEee
Confidence 4567788889999999887 467789999877 334466778888887773 455778888877776779999999
Q ss_pred CCC
Q 022401 102 SGG 104 (298)
Q Consensus 102 ~~~ 104 (298)
+.+
T Consensus 95 ~~~ 97 (288)
T PF03881_consen 95 EMG 97 (288)
T ss_dssp ---
T ss_pred cCC
Confidence 765
No 486
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=96.67 E-value=0.018 Score=48.76 Aligned_cols=30 Identities=23% Similarity=0.325 Sum_probs=23.7
Q ss_pred CcEEecCCCCceEeeCCCCCCEEEeecCccc
Q 022401 139 QVCHRDLKLENTLLDGSPAPRLKICDFGYSK 169 (298)
Q Consensus 139 ~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~ 169 (298)
.++|+|++|.||++++++. ..-|.||+.+.
T Consensus 186 ~lvHGD~~~~Nilv~~~~~-~~gviDWe~a~ 215 (276)
T cd05152 186 VLVHGDLHPGHILIDEDAR-VTGLIDWTEAK 215 (276)
T ss_pred eeEeCCCCCCcEEEeCCCC-EEEEECcHhcc
Confidence 4899999999999986433 24699998654
No 487
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=96.59 E-value=0.031 Score=48.13 Aligned_cols=139 Identities=16% Similarity=0.104 Sum_probs=78.2
Q ss_pred eeEEeeeccCCeEEEEEEEEccCCcEEEEEEee--cCCcchHHHHHHHHHHhcCCC--CCeeeeeEEEEeCC--eEEEEE
Q 022401 25 YDFVRDIGSGNFGVARLMRDKVTKELVAVKYIE--RGDKIDENVQREIINHRSLRH--PNIVRFKEVILTPT--HLAIVM 98 (298)
Q Consensus 25 y~~~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~--~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~--~~~lv~ 98 (298)
..+++....|-...+|..... ++.+++.... ..........+|...++.+.- --....+++|.++. ..+.||
T Consensus 27 ~~~v~~~~~G~sn~t~~~~~~--~~~~vlR~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~ 104 (321)
T COG3173 27 LLIVEEISGGWSNDTFRLGDT--GQKYVLRKPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVM 104 (321)
T ss_pred CceeeeccCCcccceEEEecC--CceEEEecCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEE
Confidence 445555544444466666554 6678888321 122333455677777777643 22334455555554 668999
Q ss_pred eccCCCCHHHHHHhCCCCCHHHHHHHHH-HHHHHHHHHhh----------------------------------------
Q 022401 99 EYASGGELFERICNAGRFSEDEARFFFQ-QLISGVSYCHA---------------------------------------- 137 (298)
Q Consensus 99 ~~~~~~sL~~~l~~~~~~~~~~~~~i~~-~l~~~l~~Lh~---------------------------------------- 137 (298)
++..|..+.+.+... +.. .+++. .++..|..||+
T Consensus 105 ~~veGe~~~~~~~~~---~~~--~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~ 179 (321)
T COG3173 105 EWVEGEVVWSALPPE---SLG--RQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPL 179 (321)
T ss_pred EEecceeccCcCCcc---cch--HHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCch
Confidence 999883222111000 000 11111 33333333332
Q ss_pred ------------------cCcEEecCCCCceEeeCCCCCCEEEeecCcccccc
Q 022401 138 ------------------MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 172 (298)
Q Consensus 138 ------------------~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~~~~ 172 (298)
..++|||+++.|+++++++. +=|.||+++....
T Consensus 180 ~~~~~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~~~~--~gVlDwe~~~lGD 230 (321)
T COG3173 180 ADRLIKWLEANRPPWAGPPVLVHGDYRPGNLIIDPGRP--TGVLDWELATLGD 230 (321)
T ss_pred HHHHHHHHHhcCCCcCCCceeeeCCcccCCEEEeCCCe--eEEEeccccccCC
Confidence 22699999999999998887 8899999876433
No 488
>PRK11768 serine/threonine protein kinase; Provisional
Probab=96.55 E-value=0.13 Score=44.84 Aligned_cols=70 Identities=13% Similarity=0.069 Sum_probs=42.4
Q ss_pred CeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCC--ee---eeeE--EEEeCCeEEEEEeccCCCC
Q 022401 35 NFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHPN--IV---RFKE--VILTPTHLAIVMEYASGGE 105 (298)
Q Consensus 35 ~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~--i~---~~~~--~~~~~~~~~lv~~~~~~~s 105 (298)
....||.+... ++..+++|+...+......+..|+..+..|.... ++ ..-| ....++..+.++++.+|..
T Consensus 37 ~eN~vy~v~~~-~~~~~vlKv~r~~~~~~~~i~~E~~~l~~L~~~gipv~~p~~~~G~~~~~~~g~~~~l~~~~~G~~ 113 (325)
T PRK11768 37 YENRVYQFGDE-DGRRVVAKFYRPERWSDAQILEEHAFALELAEAEIPVVAPLAFNGQTLHEHQGFRFALFPRRGGRA 113 (325)
T ss_pred ccceEEEEecC-CCCEEEEEEcCcccCCHHHHHHHHHHHHHHHHCCCCCCCCccCCCCEEEEECCEEEEEEeeeCCCC
Confidence 34578888764 4557999987655445666777777776663211 11 1112 1223456788999988754
No 489
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=96.53 E-value=0.0054 Score=55.44 Aligned_cols=157 Identities=17% Similarity=0.192 Sum_probs=89.9
Q ss_pred HHHHHHHHHhcCCCCCeeeeeEEEEeC-CeEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCcEEe
Q 022401 65 NVQREIINHRSLRHPNIVRFKEVILTP-THLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHR 143 (298)
Q Consensus 65 ~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~~~i~H~ 143 (298)
++.-...+++.++|+|+...+.+.... ....+|+|++ +.||.+.+..+. +...... ..|+.|-
T Consensus 28 ~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~-~~Sled~~~~~~-l~~~s~~--------------~~~~~~~ 91 (725)
T KOG1093|consen 28 QILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHY-TMSLEDILKTGN-LKDESLL--------------AHGVLHL 91 (725)
T ss_pred HHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhh-ccchHHHHHhcc-cchhhhc--------------cccccee
Confidence 344556788889999999999887643 4578899998 668888775543 2111111 1222221
Q ss_pred cCCCCceEeeCCCCCCEEEeecCccccccCCCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHhCCCCCCC
Q 022401 144 DLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLVGGYPFED 223 (298)
Q Consensus 144 dl~p~nilv~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~ 223 (298)
|+ ++..| -++... .... .+++||||+|.++.++.-|...+..
T Consensus 92 -----~~---------~~~td-~~~t~~------~~~~-----------------~pKsdVwsl~~i~~el~L~~~l~~~ 133 (725)
T KOG1093|consen 92 -----NI---------IYITD-HFLTKY------PSPI-----------------GPKSDVWSLGFIILELYLGISLEAE 133 (725)
T ss_pred -----hh---------hhccc-cccccC------CCCC-----------------CcchhhhhHHHHHHHHHHhhHHHHH
Confidence 12 22222 010100 0000 1259999999999999888766544
Q ss_pred CCCchhHHHHHHHHhhcCCCCC----------CCCCCCHHHHHHHHHhhhhCCCCcccccccchhh
Q 022401 224 PDEPKDFRKTIQRILSVQYSVP----------DTNPISQECRDLISRIFVADPAAVSIFFFPLNMS 279 (298)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~~ 279 (298)
....+ ..+.+..-..... ..-.++..+..+...|+...|..||...+..++.
T Consensus 134 ~~~s~----~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~k~~ 195 (725)
T KOG1093|consen 134 LTESE----YLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPLPMELSKRC 195 (725)
T ss_pred HHHHH----HHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccchhHHhcCc
Confidence 33221 1122111111000 0012467788999999999999999776665543
No 490
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=96.47 E-value=0.0078 Score=48.81 Aligned_cols=55 Identities=16% Similarity=0.109 Sum_probs=33.6
Q ss_pred CcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCe-eeeeEEEEeCCeEEEEEeccCCCCH
Q 022401 48 KELVAVKYIERGDKIDENVQREIINHRSLRHPNI-VRFKEVILTPTHLAIVMEYASGGEL 106 (298)
Q Consensus 48 ~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~~~~~~~sL 106 (298)
++.|++++........-....|..+++.+...++ .++++.+ .+ . .|.+|+++.+|
T Consensus 2 ~~~~~~Ri~g~~t~~~idr~~E~~~~~~l~~~g~~p~~~~~~-~~-g--~v~e~i~g~~l 57 (211)
T PF01633_consen 2 PEKYLVRIPGEGTENFIDRENENEALKLLSEAGLGPKIIYFF-EN-G--RVEEFIEGRTL 57 (211)
T ss_dssp TSEEEEEEEESCGCSHHHHHHHHHHHHHHHHTTSSS-EEEEE-TT-E--EEEE--SSEE-
T ss_pred CCEEEEEeCCCCcccccCHHHHHHHHHHHHHcCCCCeEEEEc-CC-C--cEEEEeccccc
Confidence 4578999888776566667788888888865555 3444443 22 2 35588876654
No 491
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=96.39 E-value=0.14 Score=43.98 Aligned_cols=29 Identities=31% Similarity=0.615 Sum_probs=24.2
Q ss_pred cCcEEecCCCCceEeeCCCCCCEEEeecCccc
Q 022401 138 MQVCHRDLKLENTLLDGSPAPRLKICDFGYSK 169 (298)
Q Consensus 138 ~~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~ 169 (298)
.+++|||+++.||+++. +. +.++||+.+.
T Consensus 187 ~~liHgD~~~~Nil~~~-~~--i~lIDfd~~~ 215 (313)
T TIGR02906 187 RGFCHQDYAYHNILLKD-NE--VYVIDFDYCT 215 (313)
T ss_pred CceEcCCCCcccEEEeC-Cc--EEEEECcccc
Confidence 57899999999999986 44 8899998543
No 492
>PTZ00384 choline kinase; Provisional
Probab=96.37 E-value=0.044 Score=48.69 Aligned_cols=78 Identities=10% Similarity=0.024 Sum_probs=44.8
Q ss_pred CeeEEeeeccCCeEEEEEEEEccC-CcE-----EEEEEeecCCcchHHHHHHHHHHhcCCCCCee-eeeEEEEeCCeEEE
Q 022401 24 RYDFVRDIGSGNFGVARLMRDKVT-KEL-----VAVKYIERGDKIDENVQREIINHRSLRHPNIV-RFKEVILTPTHLAI 96 (298)
Q Consensus 24 ~y~~~~~lg~g~~~~vy~~~~~~~-~~~-----~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~l 96 (298)
..++ +.+..|-...+|++..... +.. |.++.........-.-.+|..+++.+...++- ++++.+. -++
T Consensus 52 ~i~i-~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~IdR~~E~~i~~~Ls~~glgP~l~~~f~----~g~ 126 (383)
T PTZ00384 52 FIEI-KKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVIDNDLQYNIAKLLGDNNFGPKIIGRFG----DFT 126 (383)
T ss_pred cEEE-EEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEeccHHHHHHHHHHHhCCCCCeEEEecC----CEE
Confidence 3444 4555577789998875432 122 44443322222222335688888888665554 4555542 257
Q ss_pred EEeccCCCCH
Q 022401 97 VMEYASGGEL 106 (298)
Q Consensus 97 v~~~~~~~sL 106 (298)
+.+|++|.++
T Consensus 127 l~efIeGr~l 136 (383)
T PTZ00384 127 IQEWVEGNTM 136 (383)
T ss_pred EEEEeccccC
Confidence 8899988766
No 493
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=96.29 E-value=0.14 Score=44.11 Aligned_cols=29 Identities=21% Similarity=0.266 Sum_probs=25.6
Q ss_pred CcEEecCCCCceEeeCCCCCCEEEeecCccc
Q 022401 139 QVCHRDLKLENTLLDGSPAPRLKICDFGYSK 169 (298)
Q Consensus 139 ~i~H~dl~p~nilv~~~~~~~~~l~d~~~~~ 169 (298)
+++|+|+.++|+++++++. +.++||..+.
T Consensus 197 ~lcHgD~~~~Nvl~~~~~~--~~iIDfd~~~ 225 (309)
T TIGR02904 197 VLVHGKLSLSHFLYDETRG--GYFINFEKAS 225 (309)
T ss_pred eeeCCCCcHHhEEEcCCCC--EEEEEhhhcc
Confidence 6999999999999988776 8999998654
No 494
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=95.90 E-value=0.0015 Score=65.80 Aligned_cols=202 Identities=13% Similarity=0.072 Sum_probs=123.5
Q ss_pred HHHHHhcCCCCCeeeeeEEEEeC--CeEEEEEeccCCCCHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHhhcC---
Q 022401 69 EIINHRSLRHPNIVRFKEVILTP--THLAIVMEYASGGELFERICNA----GRFSEDEARFFFQQLISGVSYCHAMQ--- 139 (298)
Q Consensus 69 e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~~~~~~~sL~~~l~~~----~~~~~~~~~~i~~~l~~~l~~Lh~~~--- 139 (298)
|..-.+...|+++.....-.... ...+..+.++.+|.+.+.+-++ +..+..-+....++.+....-.|+..
T Consensus 1279 e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg 1358 (2724)
T KOG1826|consen 1279 ERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLG 1358 (2724)
T ss_pred hhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCC
Confidence 33444556788876654444332 2457788888888888887543 33444444444444455555545321
Q ss_pred --cEEecCCCCceEeeCCCCCCEEEeecCccc-cccCCCCCCCCCCCCcccCccccccccCCCCccchHHHHHHHHHHHh
Q 022401 140 --VCHRDLKLENTLLDGSPAPRLKICDFGYSK-SSVLHSQPKSTVGTPAYIAPEVLLRHEYDGKIADVWSCGVTLYVMLV 216 (298)
Q Consensus 140 --i~H~dl~p~nilv~~~~~~~~~l~d~~~~~-~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ll~~l~~ 216 (298)
-+|.++++.|.++..+.. ++++++|+.+ ........+...+++.|+.+++...-.++.+ +|+|..|+.+|..-.
T Consensus 1359 ~T~v~~~Lkf~lpmIVtny~--v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N~ik~t~r-sdilr~s~~ly~rs~ 1435 (2724)
T KOG1826|consen 1359 NTNVSKSLKFTLPMIVTNYN--VKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKNEIKFTKR-SDILRRSLSLYLRSD 1435 (2724)
T ss_pred ccchhhhhhhhccceecCCc--ccccccccccccCchHhhhhhhhCCHHHHHHHHHHHHhhhhH-HHHHHHHHHHHHHhc
Confidence 689999999999987766 9999999987 3333344456667888999998877777666 999999999988776
Q ss_pred CCCCCCCCCCchhHHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHhhhhCCCCcccccccchh
Q 022401 217 GGYPFEDPDEPKDFRKTIQRILSVQYSVPDTNPISQECRDLISRIFVADPAAVSIFFFPLNM 278 (298)
Q Consensus 217 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~l~~ 278 (298)
|..+|..- .....+.+..........-..|.+.......+|-..-..||.-..++.+
T Consensus 1436 ~n~~fi~f-----lq~~Lkgiidn~tf~sIe~l~pgdaNve~~~~Ll~K~~~rp~q~isls~ 1492 (2724)
T KOG1826|consen 1436 GNAYFIFF-----LQPALKGIIDNHTFFSIEKLKPGDANVEALHRLLWKYMERPGQYISLSR 1492 (2724)
T ss_pred ccHHHHHH-----HHHHHcCcccccccccccccCCCcccHHHHHHHHHHhhhcchhhhhccc
Confidence 66554321 1112222211111111111134555555555666666677755444443
No 495
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=95.60 E-value=0.043 Score=47.81 Aligned_cols=83 Identities=25% Similarity=0.283 Sum_probs=57.7
Q ss_pred CCeeeeeEEEEeC-CeEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhh-cCcEEecCCCCceEeeCCC
Q 022401 79 PNIVRFKEVILTP-THLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA-MQVCHRDLKLENTLLDGSP 156 (298)
Q Consensus 79 ~~i~~~~~~~~~~-~~~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh~-~~i~H~dl~p~nilv~~~~ 156 (298)
++..+..-+-.++ ...|++|++- |+++.. + .--...++..++++.+..+.-+.. -.+-|+|+...||+++ .|
T Consensus 285 ~~~e~~~vv~~de~~y~yl~~kdh-gt~is~-i---k~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~G 358 (488)
T COG5072 285 VFLETLKVVSLDETLYLYLHFKDH-GTPISI-I---KADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EG 358 (488)
T ss_pred hhhhcceEEecCCceEEEEEEecC-Cceeee-e---ecccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cC
Confidence 4444433333233 3567788775 445432 1 112567888899988888877764 3689999999999999 77
Q ss_pred CCCEEEeecCccc
Q 022401 157 APRLKICDFGYSK 169 (298)
Q Consensus 157 ~~~~~l~d~~~~~ 169 (298)
+ +.|+||.+++
T Consensus 359 n--vtLIDfklsR 369 (488)
T COG5072 359 N--VTLIDFKLSR 369 (488)
T ss_pred c--eEEEEeeeee
Confidence 7 9999999987
No 496
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=95.14 E-value=0.13 Score=44.61 Aligned_cols=131 Identities=16% Similarity=0.178 Sum_probs=75.2
Q ss_pred CeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCC------eeeeeEEEE--eCC--eEEEEEeccCCC
Q 022401 35 NFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHPN------IVRFKEVIL--TPT--HLAIVMEYASGG 104 (298)
Q Consensus 35 ~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~--~~~--~~~lv~~~~~~~ 104 (298)
....+|.+... +|+ +++|+.... .....+..|+..++-|.-.+ +...-|-.. -.. ..+.+++|++|.
T Consensus 37 ~eN~~f~~~~~-~g~-~iLki~~~~-~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~~l~G~ 113 (331)
T COG2334 37 EENSNFRVQTE-DGR-YILKIYRPG-WTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAALFEYLPGR 113 (331)
T ss_pred ccCceEEEEec-CCC-eEEEEecCC-CCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEEEEecCCc
Confidence 44577888775 333 599998887 66677777887777663211 122211111 123 778899999988
Q ss_pred CHHH-H----H----------H----hCC----C-C---CHH----H---------HHHHHHHHHHHHHHHh--------
Q 022401 105 ELFE-R----I----------C----NAG----R-F---SED----E---------ARFFFQQLISGVSYCH-------- 136 (298)
Q Consensus 105 sL~~-~----l----------~----~~~----~-~---~~~----~---------~~~i~~~l~~~l~~Lh-------- 136 (298)
.+.. . + + ..+ . . ... . -.....++...+..+.
T Consensus 114 ~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~~~~lp 193 (331)
T COG2334 114 PLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLLARLPAHLP 193 (331)
T ss_pred CcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHHhhchhhCC
Confidence 7762 1 1 0 000 0 0 000 0 0012223333333333
Q ss_pred hcC--cEEecCCCCceEeeCCCCCCEEEeecCccc
Q 022401 137 AMQ--VCHRDLKLENTLLDGSPAPRLKICDFGYSK 169 (298)
Q Consensus 137 ~~~--i~H~dl~p~nilv~~~~~~~~~l~d~~~~~ 169 (298)
+.+ ++|+|+.|.||+++.+.. .+-+.||+-+.
T Consensus 194 ~~~~~iIH~D~~~~NVl~d~~~~-~~g~iDFdDa~ 227 (331)
T COG2334 194 ALGDQIIHGDLHPDNVLFDDDTD-VSGFIDFDDAG 227 (331)
T ss_pred cccceeeecCCCccceeEcCCCC-eeeEEEccccc
Confidence 233 899999999999987763 36789998654
No 497
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=95.13 E-value=0.13 Score=41.83 Aligned_cols=86 Identities=17% Similarity=0.134 Sum_probs=55.7
Q ss_pred hHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEeccCCCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHh--hcCc
Q 022401 63 DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCH--AMQV 140 (298)
Q Consensus 63 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~~~~sL~~~l~~~~~~~~~~~~~i~~~l~~~l~~Lh--~~~i 140 (298)
..-+.++..++.++ -+|+++..- ....+.++.|+|..-.. . +. -++..=+.+|...| +.+.
T Consensus 102 ~~~y~nky~v~Arm--hGilrL~ND--n~~~yGvIlE~Cy~~~i---~------~~----N~i~agi~~L~~fH~~~~~~ 164 (308)
T PF07387_consen 102 DALYFNKYRVFARM--HGILRLKND--NNYKYGVILERCYKIKI---N------FS----NFITAGIKDLMDFHSENQHC 164 (308)
T ss_pred hhhhhhhhhHHHHh--hheeEeecC--CCceeEEEEeeccCccc---c------hh----HHHHHhHHHHHHhhccCCCe
Confidence 34566676766644 356666532 33467899998854211 0 01 11112245566778 3569
Q ss_pred EEecCCCCceEeeCCCCCCEEEeecCc
Q 022401 141 CHRDLKLENTLLDGSPAPRLKICDFGY 167 (298)
Q Consensus 141 ~H~dl~p~nilv~~~~~~~~~l~d~~~ 167 (298)
.|||..|+||+.|..|. +||.|-+.
T Consensus 165 lHGD~np~NiM~D~~G~--lKlVDP~~ 189 (308)
T PF07387_consen 165 LHGDCNPDNIMCDKFGY--LKLVDPVC 189 (308)
T ss_pred ecCCCChhheeecCCCC--EEecChhh
Confidence 99999999999999999 99999763
No 498
>PTZ00296 choline kinase; Provisional
Probab=95.04 E-value=0.31 Score=44.28 Aligned_cols=79 Identities=16% Similarity=0.042 Sum_probs=47.7
Q ss_pred CCeeEEeeeccCCeEEEEEEEEcc--------CCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCee-eeeEEEEeCCe
Q 022401 23 DRYDFVRDIGSGNFGVARLMRDKV--------TKELVAVKYIERGDKIDENVQREIINHRSLRHPNIV-RFKEVILTPTH 93 (298)
Q Consensus 23 ~~y~~~~~lg~g~~~~vy~~~~~~--------~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~ 93 (298)
++. -++.|..|=.-.+|++.... .++.|+++++-.+....-...+|..+++.+...++- ++++.+.
T Consensus 106 ~~I-~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~lIdR~~E~~v~~~ls~~gi~P~l~~~f~---- 180 (442)
T PTZ00296 106 DDV-RVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDELYNPISEFEVYKTMSKYRIAPQLLNTFS---- 180 (442)
T ss_pred ccE-EEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCccceeCHHHHHHHHHHHHHCCCCCceEEEeC----
Confidence 344 56666666667888887542 145789998766544333456677777777544443 3444431
Q ss_pred EEEEEeccCCCCH
Q 022401 94 LAIVMEYASGGEL 106 (298)
Q Consensus 94 ~~lv~~~~~~~sL 106 (298)
-+.+.+|.+|.+|
T Consensus 181 gg~I~efi~g~~l 193 (442)
T PTZ00296 181 GGRIEEWLYGDPL 193 (442)
T ss_pred CCEEEEeeCCccC
Confidence 2346788877644
No 499
>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []. Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process
Probab=94.79 E-value=0.14 Score=42.70 Aligned_cols=79 Identities=15% Similarity=0.123 Sum_probs=53.9
Q ss_pred EeeeccCCeEEEEEEEEccCCcEEEEEEeecCCcchHHHHHHHHHHhcCCCCCeeeeeEEEEeCCeEEEEEecc-CCCCH
Q 022401 28 VRDIGSGNFGVARLMRDKVTKELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYA-SGGEL 106 (298)
Q Consensus 28 ~~~lg~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~~~~-~~~sL 106 (298)
...+..|..+.|+.++.. +|+.+++|+.........+...+ ..|+...-.+.+++++. +...-.+++|+. ++.+|
T Consensus 7 ~~~~~~g~~s~V~pv~~~-dG~~avLKl~~p~~~~~~E~~g~-~~L~~w~G~GaVrll~~--d~~~~AlLLErl~~g~~L 82 (253)
T PF04655_consen 7 DGPPAHGSSSLVVPVRRA-DGTPAVLKLAPPHAEAEHEARGE-AALRWWNGRGAVRLLAA--DPERGALLLERLDPGRSL 82 (253)
T ss_pred CCCCCCCcceEEEEEEcC-CCCeEEEEecCCcccchhhhhHH-hHhheeCCCCceeeecc--ccccchhhhhhccCCCch
Confidence 345667888999999865 68899999877655433332222 34777788888899886 344566688888 55677
Q ss_pred HHHH
Q 022401 107 FERI 110 (298)
Q Consensus 107 ~~~l 110 (298)
.+..
T Consensus 83 ~~~~ 86 (253)
T PF04655_consen 83 ASLP 86 (253)
T ss_pred hhcc
Confidence 5443
No 500
>PRK06148 hypothetical protein; Provisional
Probab=94.64 E-value=1 Score=45.57 Aligned_cols=32 Identities=34% Similarity=0.484 Sum_probs=25.6
Q ss_pred cCcEEecCCCCceEeeCCCCCCEE-EeecCccc
Q 022401 138 MQVCHRDLKLENTLLDGSPAPRLK-ICDFGYSK 169 (298)
Q Consensus 138 ~~i~H~dl~p~nilv~~~~~~~~~-l~d~~~~~ 169 (298)
.+++|+|+++.||+++.++..++. |+|||-+.
T Consensus 203 ~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~ 235 (1013)
T PRK06148 203 AQVIHNDANDYNILVDADDGERISGLIDFGDAV 235 (1013)
T ss_pred cceECCCCCcccEEEcCCCCcceEEEEECcccc
Confidence 569999999999999877532355 99999765
Done!