Query         022402
Match_columns 297
No_of_seqs    105 out of 473
Neff          6.9 
Searched_HMMs 13730
Date          Mon Mar 25 04:54:36 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022402.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/022402hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1xfia_ e.50.1.1 (A:) Hypothet 100.0 2.8E-65   2E-69  478.8  26.2  290    6-295    71-360 (360)
  2 d2ffja1 e.50.1.1 (A:7-288) Hyp 100.0 5.5E-62   4E-66  447.3  20.2  253    6-293    23-281 (282)
  3 d2g8la1 e.50.1.1 (A:1-284) Hyp 100.0 1.6E-60 1.2E-64  437.9  19.9  249    6-294    29-284 (284)
  4 d1nhpa2 c.3.1.5 (A:120-242) NA  73.0      12  0.0009   26.7   9.3   66  127-198    15-80  (123)
  5 d1d7ya2 c.3.1.5 (A:116-236) NA  70.0       7 0.00051   28.2   7.2   64  127-198    17-80  (121)
  6 d1djqa2 c.3.1.1 (A:490-645) Tr  60.5     7.5 0.00054   28.8   5.8   57  141-201    38-94  (156)
  7 d1q1ra2 c.3.1.5 (A:115-247) Pu  56.7      13 0.00093   27.1   6.4   64  127-198    22-85  (133)
  8 d1e5qa1 c.2.1.3 (A:2-124,A:392  52.4     9.2 0.00067   28.2   5.0   35  142-182     2-36  (182)
  9 d1bg6a2 c.2.1.6 (A:4-187) N-(1  46.6     5.4  0.0004   30.1   2.8   32  143-180     2-33  (184)
 10 d1eika_ d.78.1.1 (A:) RNA poly  41.6     5.3 0.00039   27.1   1.7   20  272-291    40-59  (77)
 11 d1dzfa2 d.78.1.1 (A:144-215) E  39.2     6.6 0.00048   26.3   1.9   20  272-291    36-55  (72)
 12 d1m6ia2 c.3.1.5 (A:264-400) Ap  38.9      29  0.0021   25.0   5.9   66  126-196    23-89  (137)
 13 d1hmja_ d.78.1.1 (A:) RNA poly  38.1     6.6 0.00048   25.9   1.7   20  272-291    29-48  (68)
 14 d1xhca2 c.3.1.5 (A:104-225) NA  36.5      39  0.0028   23.7   6.2   59  127-195    19-77  (122)
 15 d2ax3a2 c.104.1.1 (A:1-211) Hy  34.6      24  0.0017   27.9   5.0   44  133-180    31-76  (211)
 16 d1mo9a2 c.3.1.5 (A:193-313) NA  28.8      81  0.0059   21.4   8.5   53  129-187     9-61  (121)
 17 d1cg5a_ a.1.1.2 (A:) Hemoglobi  27.5      33  0.0024   25.0   4.4   71    1-78      1-77  (141)
 18 d1geea_ c.2.1.2 (A:) Glucose d  24.5 1.5E+02   0.011   23.2   9.4   33  144-180     8-40  (261)
 19 d1n7ha_ c.2.1.2 (A:) GDP-manno  24.4      46  0.0034   26.8   5.3   35  144-182     2-36  (339)
 20 d1vlja_ e.22.1.2 (A:) NADH-dep  23.5 1.2E+02  0.0089   25.5   8.3   70  128-202    20-91  (398)
 21 d1f0ka_ c.87.1.2 (A:) Peptidog  22.0      40  0.0029   27.0   4.4   35  143-178     1-35  (351)
 22 d2ag5a1 c.2.1.2 (A:1-245) Dehy  20.6 1.5E+02   0.011   22.9   7.8   33  144-180     7-39  (245)
 23 d1t2aa_ c.2.1.2 (A:) GDP-manno  20.3      63  0.0046   26.1   5.3   34  143-180     1-34  (347)

No 1  
>d1xfia_ e.50.1.1 (A:) Hypothetical protein At2g17340 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=100.00  E-value=2.8e-65  Score=478.79  Aligned_cols=290  Identities=85%  Similarity=1.317  Sum_probs=256.9

Q ss_pred             HHHHHHHHHHHcccCCCCCCCchHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHH
Q 022402            6 LRNLLKEILEDMKKDPETHGGPPDCILLCRLREQVLRELGFRDIFKKVKDEENAKAISLFGDVVRLNDVIEDEGKRVESL   85 (297)
Q Consensus         6 ~~~~~~~~~~~l~~~~~~~~~~~e~~l~~~i~~~~~~~~g~~DPf~~~K~~~n~~a~~~~~~l~~~l~~~~~~~~~l~~~   85 (297)
                      +.+.|.+.+..+..+|.++++++.+.+..++++.+.+.+|..|||+++|+++|+.|++.++.+.+.++.+.++.+++.++
T Consensus        71 f~~~y~~~L~~l~~~p~~~g~~~~~~ll~~~re~~Lr~~Gf~DpY~~~K~~eN~~Al~~lp~~~~~id~i~d~~~~l~~~  150 (360)
T d1xfia_          71 FAERYAGILEDLKKDPESHGGPPDGILLCRLREQVLRELGFRDIFKKVKDEENAKAISLFPQVVSLSDAIEDDGKRLENL  150 (360)
T ss_dssp             HHHHHHHHHHHHHHCTTGGGCSCCHHHHHHHHHHHHHHTTCSCTTHHHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCcccCcccHHHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHH
Confidence            66788899999999988899998877888999999999999999999999999999999999999998888778899999


Q ss_pred             HHHHHhhhhhhccchhhhhhhcccCCCHHHHHhhhCCCCCccCcHHHHHHHhccCCCCeEEEEecCCChhhhhchHHHHH
Q 022402           86 IRGIFAGNIFDLGSAQLAEVFSKDGMSFLASCQNLVPRPWVIDDLETFKVKWSKKAWKKAVIFVDNSGADIILGILPFAR  165 (297)
Q Consensus        86 lr~al~GN~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~~~l~~~L~~~~~~~i~~i~DNaGeeiv~Dll~L~~  165 (297)
                      +|++++||+||||+....+.++.++.++.+.++++.+++|.+||++.|.++|.+.++++|+|++|||||.+|..++|+++
T Consensus       151 vr~aiAGNifD~Ga~~~~~~~~~~~~~~~~~~~~~~~rp~~vDd~d~~~~rl~~~~~k~vly~~DNaGe~Vfd~lL~~~r  230 (360)
T d1xfia_         151 VRGIFAGNIFDLGSAQLAEVFSRDGMSFLASCQNLVPRPWVIDDLENFQAKWINKSWKKAVIFVDNSGADIILGILPFAR  230 (360)
T ss_dssp             HHHHHHHHHC---------------CCHHHHTTCSCCSSCSEECHHHHHHHHTTTCCCEEEEECCBTTHHHHHTHHHHHH
T ss_pred             HHHHHHHHhhhcccccchhhhccccchHHHHHHHhhcCCCccccHHHHHHHHhcCCcceEEEEecCCchHHHHHHHHHHH
Confidence            99999999999999876666666678999999999999999999999999998766789999999999944444456789


Q ss_pred             HHHhCCCEEEEEecCCcccccCChHHHHHHHHHhhhhhhhhccccccceeecccCCcccCcCcccccHHHHHHhccCcEE
Q 022402          166 ELLRRGTQVILAANDLPSINDVTYPELIEIMSKLKDEKGQLMGVDTSKLLIANSGNDLPVIDLTAVSQELAYLASDADLV  245 (297)
Q Consensus       166 ~L~~~g~~V~~~vK~~P~vnDvT~~D~~~~l~~l~~~d~~l~~l~~~~~~vi~~G~~~~~~~l~~~s~el~~~l~~aDLV  245 (297)
                      +|+++|++|+++||+.|++||||++|+..++.+++.+++.+.|++++...|++||+..||+++.++|+||.+++++||||
T Consensus       231 ell~~g~~V~l~v~~~PilNDvT~~El~~~~~~~~~~~~~~~gld~~~~~Vv~sG~~~Pg~dL~~~s~E~~~~~~~aDLV  310 (360)
T d1xfia_         231 ELLRRGAQVVLAANELPSINDITCTELTEILSQLKDENGQLLGVDTSKLLIANSGNDLPVIDLSRVSQELAYLSSDADLV  310 (360)
T ss_dssp             HHHHTTCEEEEEEBSSCCTTBCBHHHHHHHHHHHC--CCEETTEECTTEEEEECCCCSSSCCTTSBCHHHHHHHTTCSEE
T ss_pred             HHhcCCCeEEEEECCCcchhhhhHHHHHHHHHHHhhhhhHhhhhcccceEEecCCCCCCCcChHhCCHHHHHHHhcCCEE
Confidence            99999999999999999999999999999999999999998899988889999999999999999999999999999999


Q ss_pred             EEecCCCCCCcccceeeccccccccccCCHHHHHHhCCcccCEEEEeccC
Q 022402          246 ILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQFLGGRLYDCVFKYNEV  295 (297)
Q Consensus       246 I~KG~~Ny~~~~i~~~f~~~~l~l~~~KC~~va~~lg~~~~~~v~~~~~~  295 (297)
                      |+|||||.+|+|++..|+|++|||+|+||++||+++|+++||+||+++++
T Consensus       311 I~KGMGr~~~tN~~a~f~c~~lkL~~vK~~~vA~~lGg~~~d~V~k~~~~  360 (360)
T d1xfia_         311 IVEGMGRGIETNLYAQFKCDSLKIGMVKHLEVAEFLGGRLYDCVFKFNEV  360 (360)
T ss_dssp             EEESHHHHTTBSTTCCCSSEEEEEEECCCHHHHHHHTCCTTCEEEEEECC
T ss_pred             EEcCCcchhhccchhhcCCCeehhhhhcCHHHHHHhCCccccEEEEecCC
Confidence            99999998899999999999999999999999999999999999999875


No 2  
>d2ffja1 e.50.1.1 (A:7-288) Hypothetical protein AF1104 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=100.00  E-value=5.5e-62  Score=447.27  Aligned_cols=253  Identities=22%  Similarity=0.223  Sum_probs=214.1

Q ss_pred             HHHHHHHHHHHcccCCCCCCCchHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHH
Q 022402            6 LRNLLKEILEDMKKDPETHGGPPDCILLCRLREQVLRELGFRDIFKKVKDEENAKAISLFGDVVRLNDVIEDEGKRVESL   85 (297)
Q Consensus         6 ~~~~~~~~~~~l~~~~~~~~~~~e~~l~~~i~~~~~~~~g~~DPf~~~K~~~n~~a~~~~~~l~~~l~~~~~~~~~l~~~   85 (297)
                      .+..+.+.++.+.+......+||.  +..++|+.+.+.+|+.|||+++|+++|+.|++.++.+++.+++   +.++|.++
T Consensus        23 ~~~~~~~~~~~l~~~~~~~~~p~~--~~~~i~~~i~~~~g~~DPy~~~K~~~n~~Al~~~~~~~~~l~~---~~d~l~~~   97 (282)
T d2ffja1          23 ISQCVDESLKILAENYSSRPINAH--LATRIHRRVYEILGVEDPYAEVKARANEVARQVLPLAKEIVEG---SDDPFKTA   97 (282)
T ss_dssp             HHHHHHHHHHHHHHC-----CCHH--HHHHHHHHHHHHHTCSCTTHHHHHHHHHHHHHHHHHHHHHHHH---SSSHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcHH--HHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHc---CHHHHHHH
Confidence            566677777777664344567888  9999999999999999999999999999999999999988754   34689999


Q ss_pred             HHHHHhhhhhhccchhhhhhhcccCCCHHHHHhhhCCCCCccCcHHHHHHHhccCCCCeEEEEecCCChhhhhchHHHHH
Q 022402           86 IRGIFAGNIFDLGSAQLAEVFSKDGMSFLASCQNLVPRPWVIDDLETFKVKWSKKAWKKAVIFVDNSGADIILGILPFAR  165 (297)
Q Consensus        86 lr~al~GN~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~~~l~~~L~~~~~~~i~~i~DNaGeeiv~Dll~L~~  165 (297)
                      +|+|+|||.+|+|+.++...    +.++.+.+.+..+++|.+||++++++..    +++|+||+||||| +|||++ ||+
T Consensus        98 lk~a~~GN~~D~g~~~~~~~----e~~~~~~~~~~~~~~~~idd~~~l~~~~----~~~vlyl~DNaGE-iv~D~l-Li~  167 (282)
T d2ffja1          98 VIVSIVGNNFDYGVQGHKVV----EEEFRDFLKRKVQEGLKINDTERIKELS----SGKVVYLTDNAGE-IFFDTL-LMK  167 (282)
T ss_dssp             HHHHHHGGGCCC------CH----HHHHHHHHHHHHHHCCSEECHHHHHHHT----TSEEEEECCBTTH-HHHHHH-HHH
T ss_pred             HHHHHHHhhhccCcccccch----hHHHHHHHHHhhccCCccCcHHHHhhcc----CCeeEEEcCCcch-HHHHHH-HHH
Confidence            99999999999999875321    1245555666667799999999998853    4799999999995 999999 999


Q ss_pred             HHHhCCCEEEEEecCCcccccCChHHHHHHHHHhhhhhhhhccccccceeecccCCcccCcCcccccHHHHHHhccCcEE
Q 022402          166 ELLRRGTQVILAANDLPSINDVTYPELIEIMSKLKDEKGQLMGVDTSKLLIANSGNDLPVIDLTAVSQELAYLASDADLV  245 (297)
Q Consensus       166 ~L~~~g~~V~~~vK~~P~vnDvT~~D~~~~l~~l~~~d~~l~~l~~~~~~vi~~G~~~~~~~l~~~s~el~~~l~~aDLV  245 (297)
                      +|+++|++|++|||++||+||||++|+.++            ++++....++++|+++||++++++|++|+++|++||||
T Consensus       168 ~L~~~g~~V~~~vk~~P~inD~T~~D~~~~------------~l~~~~~~vi~~G~~~~g~~l~~~s~e~~~~l~~adLV  235 (282)
T d2ffja1         168 EIKRRCEKLTAVVRGRPIISDATIEDARLA------------RVDKIADELLTNGKGAIGIIMDELPDETRKALEEADLI  235 (282)
T ss_dssp             HHHTTCSEEEEEEBSSCCTTBCBHHHHHHT------------THHHHSSEEEECSSCCSSCCGGGCCHHHHHHHHHCSEE
T ss_pred             HHHHhCCEEEEEECCccccccCcHHHHHHH------------HhhhhcceeecCCCCCCccChHHCCHHHHHHHccCCEE
Confidence            999999999999999999999999999986            88886668999999999999999999999999999999


Q ss_pred             EEecCCCCC------CcccceeeccccccccccCCHHHHHHhCCcccCEEEEec
Q 022402          246 ILEGMGRGI------ETNLYAQFKCDSLKIGMVKHPEVAQFLGGRLYDCVFKYN  293 (297)
Q Consensus       246 I~KG~~Ny~------~~~i~~~f~~~~l~l~~~KC~~va~~lg~~~~~~v~~~~  293 (297)
                      |+||||||+      .+|+||+|        ++||+|||+.+|||+|++||+..
T Consensus       236 IaKG~gNyE~L~~~~~~~i~~l~--------~~KC~~vA~~~gv~~g~~V~kl~  281 (282)
T d2ffja1         236 VAKGMANYECLSDGSLKPIAFLL--------TAKCEPVARDIGVNVGDMVAKVV  281 (282)
T ss_dssp             EEESHHHHHHHC---CCSEEEEE--------ECCSHHHHHHHTSCTTCEEEEEE
T ss_pred             EEccccHHHHhhcCCCCCchHhH--------HhcCHHHHHHhCCCCcCeEEEec
Confidence            999999992      24777766        68999999999999999999975


No 3  
>d2g8la1 e.50.1.1 (A:1-284) Hypothetical protein PH1575 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=100.00  E-value=1.6e-60  Score=437.92  Aligned_cols=249  Identities=18%  Similarity=0.197  Sum_probs=220.5

Q ss_pred             HHHHHHHHHHHcccCCCCCCCchHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHH
Q 022402            6 LRNLLKEILEDMKKDPETHGGPPDCILLCRLREQVLRELGFRDIFKKVKDEENAKAISLFGDVVRLNDVIEDEGKRVESL   85 (297)
Q Consensus         6 ~~~~~~~~~~~l~~~~~~~~~~~e~~l~~~i~~~~~~~~g~~DPf~~~K~~~n~~a~~~~~~l~~~l~~~~~~~~~l~~~   85 (297)
                      .++.+.+.+..+.+...+..+|+.  +.+++|+.+.+.+|..|||+++|+++|+.|+++++.+.+.+   +   ++|.++
T Consensus        29 ~~~~~~~~~~~l~~~~~~~~~p~~--~a~~~~~~i~~~~g~~Dpy~~~K~~~n~~al~~~~~l~~~~---e---~~l~~~  100 (284)
T d2g8la1          29 RRRAMILAAKLLAKEYNENAIPAI--AGSLIFLELYKFLGNDDPFIEYKLKSEEMARKVADIIKRKL---K---LDFELA  100 (284)
T ss_dssp             HHHHHHHHHHHHHHHSSTTCCHHH--HHHHHHHHHHHHHTCSCTTHHHHHHHHHHHHHHHHHHHHHC---C---CCHHHH
T ss_pred             HHHHHHHHHHHHHHhccCCCCcHH--HHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHhHHHHHHH---h---hhHHHH
Confidence            567777777777774344556666  88999999999999999999999999999999999998764   2   469999


Q ss_pred             HHHHHhhhhhhccchhhhhhhcccCCCHHHHHhhhCCCCCccCcHHHHHHHhccCCCCeEEEEecCCChhhhhchHHHHH
Q 022402           86 IRGIFAGNIFDLGSAQLAEVFSKDGMSFLASCQNLVPRPWVIDDLETFKVKWSKKAWKKAVIFVDNSGADIILGILPFAR  165 (297)
Q Consensus        86 lr~al~GN~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~~~l~~~L~~~~~~~i~~i~DNaGeeiv~Dll~L~~  165 (297)
                      +|+|+|||++|||+....       .++.+.+.+..+++|.+||+++|++.|++  +++|+||+||||| +|||++ ||+
T Consensus       101 l~~a~~GN~~D~g~~~~~-------~~~~~~~~~~~~~~~~~dd~~~~~~~l~~--~~~vl~~~DNaGE-iv~D~l-li~  169 (284)
T d2g8la1         101 VKLAIIGNVIDFSVGFSP-------EDLEEEVEKMLKDKLYIDDSKELFEEVKR--AENILYITDNVGE-HYFDAI-LIE  169 (284)
T ss_dssp             HHHHHHHHHCCTTSCSCH-------HHHHHHHHHHHTSCCSEECHHHHHHHHHH--CSEEEEECCBTTH-HHHHHH-HHH
T ss_pred             HHHHHHHhhhcccccCCc-------hhHHHHHHhhhccCCCcCCHHHHHHHHhc--CCeEEEEcCCccc-HHHhHH-HHH
Confidence            999999999999986532       35677888888999999999999999985  5799999999995 999998 999


Q ss_pred             HHHhCC-CEEEEEecCCcccccCChHHHHHHHHHhhhhhhhhccccccceeecccCCcccCcCcccccHHHHHHhccCcE
Q 022402          166 ELLRRG-TQVILAANDLPSINDVTYPELIEIMSKLKDEKGQLMGVDTSKLLIANSGNDLPVIDLTAVSQELAYLASDADL  244 (297)
Q Consensus       166 ~L~~~g-~~V~~~vK~~P~vnDvT~~D~~~~l~~l~~~d~~l~~l~~~~~~vi~~G~~~~~~~l~~~s~el~~~l~~aDL  244 (297)
                      +|+++| .+|++|||++|++||||++|+.++            ++++ ++.+|+||++.||++++++|++|+++|++|||
T Consensus       170 ~L~~~~~~~V~~~vk~~P~inD~T~~D~~~~------------~~~~-~~~vi~~G~~~~g~~l~~~s~e~~~~~~~adL  236 (284)
T d2g8la1         170 KIREISNAEVYIAGKEGPIINDATVEDLKRA------------GLEK-LGKVISTGTRIVGVPLKLVSREFMEAFNKADV  236 (284)
T ss_dssp             HHHHHCCCEEEEEEBSSCCTTBCBHHHHHHT------------TGGG-TSEEEECSSSSSSCCTTTSCHHHHHHHHHCSE
T ss_pred             HHHHCCCcEEEEEEcCccccccchHHHHHHH------------HHHH-HHHHHhCCCCCcCCChHHCCHHHHHHHccCCE
Confidence            999987 699999999999999999999985            6765 78999999999999999999999999999999


Q ss_pred             EEEecCCCCC------CcccceeeccccccccccCCHHHHHHhCCcccCEEEEecc
Q 022402          245 VILEGMGRGI------ETNLYAQFKCDSLKIGMVKHPEVAQFLGGRLYDCVFKYNE  294 (297)
Q Consensus       245 VI~KG~~Ny~------~~~i~~~f~~~~l~l~~~KC~~va~~lg~~~~~~v~~~~~  294 (297)
                      ||+||||||+      .+++||+|        ++||+|||+.+|+|+|++||++++
T Consensus       237 VI~KG~gNyE~L~~~~~~~i~~L~--------~~KC~~vA~~lg~~~g~~V~~~~~  284 (284)
T d2g8la1         237 IIAKGQGNFETLSEINDSRIFFLL--------KAKCPAVARELKVPKGALVCMRNK  284 (284)
T ss_dssp             EEEEHHHHHHHHTTSCCTTEEEEE--------ECCSHHHHHHHTSCTTCEEEEECC
T ss_pred             EEEecccHHHHHhcCCCCCeeeeh--------hcCCHHHHHHhCCCCCCeEEEeCC
Confidence            9999999992      24677766        689999999999999999999985


No 4  
>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}
Probab=72.98  E-value=12  Score=26.71  Aligned_cols=66  Identities=17%  Similarity=0.138  Sum_probs=46.8

Q ss_pred             cCcHHHHHHHhccCCCCeEEEEecCCChhhhhchHHHHHHHHhCCCEEEEEecCCcccccCChHHHHHHHHH
Q 022402          127 IDDLETFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPSINDVTYPELIEIMSK  198 (297)
Q Consensus       127 ~dd~~~l~~~L~~~~~~~i~~i~DNaGeeiv~Dll~L~~~L~~~g~~V~~~vK~~P~vnDvT~~D~~~~l~~  198 (297)
                      .+|..++.+.+.....++|++|+  +|.   ..+= +|..|.+.|.+|+++-++...+....-.++.+.+.+
T Consensus        15 ~~da~~i~~~~~~~~~k~vvViG--gG~---iG~E-~A~~l~~~g~~Vtlie~~~~~l~~~~d~~~~~~~~~   80 (123)
T d1nhpa2          15 RQWAIKLKQKTVDPEVNNVVVIG--SGY---IGIE-AAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTE   80 (123)
T ss_dssp             HHHHHHHHHHHTCTTCCEEEEEC--CSH---HHHH-HHHHHHHTTCEEEEEESSSSTTTTTCCHHHHHHHHH
T ss_pred             HHHHHHHHHHhhccCCCEEEEEC--ChH---HHHH-HHHHhhccceEEEEEEecCcccccccchhhHHHHHH
Confidence            36677788887654457999995  455   4454 679999999999998887656666555666655444


No 5  
>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}
Probab=70.04  E-value=7  Score=28.20  Aligned_cols=64  Identities=14%  Similarity=0.260  Sum_probs=46.3

Q ss_pred             cCcHHHHHHHhccCCCCeEEEEecCCChhhhhchHHHHHHHHhCCCEEEEEecCCcccccCChHHHHHHHHH
Q 022402          127 IDDLETFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPSINDVTYPELIEIMSK  198 (297)
Q Consensus       127 ~dd~~~l~~~L~~~~~~~i~~i~DNaGeeiv~Dll~L~~~L~~~g~~V~~~vK~~P~vnDvT~~D~~~~l~~  198 (297)
                      ++|..++.+.+..  ++++++|+  +|.   ..+= +|..|.+.|.+|+++-++..++.-.-.+++...+.+
T Consensus        17 l~Da~~l~~~~~~--~~~vvIIG--gG~---iG~E-~A~~l~~~g~~Vtli~~~~~~l~~~~~~~~~~~~~~   80 (121)
T d1d7ya2          17 LEDARRIQAGLRP--QSRLLIVG--GGV---IGLE-LAATARTAGVHVSLVETQPRLMSRAAPATLADFVAR   80 (121)
T ss_dssp             HHHHHHHHHHCCT--TCEEEEEC--CSH---HHHH-HHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHH
T ss_pred             HHHHHHHHHhhhc--CCeEEEEC--cch---hHHH-HHHHhhcccceEEEEeeccccccccCCHHHHHHHHH
Confidence            4678888888764  57999997  565   3443 668999999999999998777665555565554443


No 6  
>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}
Probab=60.52  E-value=7.5  Score=28.83  Aligned_cols=57  Identities=18%  Similarity=0.144  Sum_probs=38.2

Q ss_pred             CCCeEEEEecCCChhhhhchHHHHHHHHhCCCEEEEEecCCcccccCChHHHHHHHHHhhh
Q 022402          141 AWKKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPSINDVTYPELIEIMSKLKD  201 (297)
Q Consensus       141 ~~~~i~~i~DNaGeeiv~Dll~L~~~L~~~g~~V~~~vK~~P~vnDvT~~D~~~~l~~l~~  201 (297)
                      +.++++++-+..|+   .-+= +|+.|.+.|++|+++-+..-+...+.......+.+.+..
T Consensus        38 ~~~~vvi~d~ggg~---ig~e-~A~~la~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~l~~   94 (156)
T d1djqa2          38 IGKRVVILNADTYF---MAPS-LAEKLATAGHEVTIVSGVHLANYMHFTLEYPNMMRRLHE   94 (156)
T ss_dssp             CCSEEEEEECCCSS---HHHH-HHHHHHHTTCEEEEEESSCTTTHHHHTTCHHHHHHHHHH
T ss_pred             cCCceEEEecCCCh---HHHH-HHHHHHHcCCeEEEEecCCccccccchhHHHHHHHHHhh
Confidence            34677777778887   4565 779999999999999986434444444444444444443


No 7  
>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}
Probab=56.66  E-value=13  Score=27.07  Aligned_cols=64  Identities=17%  Similarity=0.276  Sum_probs=45.7

Q ss_pred             cCcHHHHHHHhccCCCCeEEEEecCCChhhhhchHHHHHHHHhCCCEEEEEecCCcccccCChHHHHHHHHH
Q 022402          127 IDDLETFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPSINDVTYPELIEIMSK  198 (297)
Q Consensus       127 ~dd~~~l~~~L~~~~~~~i~~i~DNaGeeiv~Dll~L~~~L~~~g~~V~~~vK~~P~vnDvT~~D~~~~l~~  198 (297)
                      .+|...+.+.+..  +++|++|+  +|.   ..+= +|..|.+.|.+|+++-++...+.....+++...+..
T Consensus        22 ~~d~~~l~~~~~~--~k~v~VIG--gG~---iG~E-~A~~l~~~g~~Vtvie~~~~~l~~~~~~~~~~~~~~   85 (133)
T d1q1ra2          22 LEDAECIRRQLIA--DNRLVVIG--GGY---IGLE-VAATAIKANMHVTLLDTAARVLERVTAPPVSAFYEH   85 (133)
T ss_dssp             HHHHHHHHHTCCT--TCEEEEEC--CSH---HHHH-HHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHH
T ss_pred             HHHHHHHHHhhcc--CCEEEEEC--Cch---HHHH-HHHHHHhhCcceeeeeecccccccccchhhhhhhhh
Confidence            3567777777653  57999995  565   4554 678999999999999998777665555666554433


No 8  
>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}
Probab=52.37  E-value=9.2  Score=28.23  Aligned_cols=35  Identities=23%  Similarity=0.200  Sum_probs=28.7

Q ss_pred             CCeEEEEecCCChhhhhchHHHHHHHHhCCCEEEEEecCCc
Q 022402          142 WKKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLP  182 (297)
Q Consensus       142 ~~~i~~i~DNaGeeiv~Dll~L~~~L~~~g~~V~~~vK~~P  182 (297)
                      .++|++|+  ||.   .... +|++|.+.|++|++.=|..+
T Consensus         2 ~K~IliiG--aG~---~G~~-~a~~L~~~g~~V~v~dr~~~   36 (182)
T d1e5qa1           2 TKSVLMLG--SGF---VTRP-TLDVLTDSGIKVTVACRTLE   36 (182)
T ss_dssp             CCEEEEEC--CST---THHH-HHHHHHTTTCEEEEEESCHH
T ss_pred             CCEEEEEC--CCH---HHHH-HHHHHHhCCCEEEEEECChH
Confidence            37899997  787   6775 99999999999998876544


No 9  
>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}
Probab=46.62  E-value=5.4  Score=30.07  Aligned_cols=32  Identities=28%  Similarity=0.264  Sum_probs=24.3

Q ss_pred             CeEEEEecCCChhhhhchHHHHHHHHhCCCEEEEEecC
Q 022402          143 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAAND  180 (297)
Q Consensus       143 ~~i~~i~DNaGeeiv~Dll~L~~~L~~~g~~V~~~vK~  180 (297)
                      ++|.+|+  +|-   .... ++..|.+.|++|+++.|.
T Consensus         2 k~iaIiG--aG~---~G~~-~A~~l~~~G~~V~~~~r~   33 (184)
T d1bg6a2           2 KTYAVLG--LGN---GGHA-FAAYLALKGQSVLAWDID   33 (184)
T ss_dssp             CEEEEEC--CSH---HHHH-HHHHHHHTTCEEEEECSC
T ss_pred             CEEEEEC--ccH---HHHH-HHHHHHHCCCEEEEEECC
Confidence            4566665  354   4565 999999999999999885


No 10 
>d1eika_ d.78.1.1 (A:) RNA polymerase subunit RBP5 (RNA polymerase subunit H) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=41.63  E-value=5.3  Score=27.13  Aligned_cols=20  Identities=25%  Similarity=0.167  Sum_probs=17.5

Q ss_pred             cCCHHHHHHhCCcccCEEEE
Q 022402          272 VKHPEVAQFLGGRLYDCVFK  291 (297)
Q Consensus       272 ~KC~~va~~lg~~~~~~v~~  291 (297)
                      .+-+|+|+.+|.++||+|=.
T Consensus        40 ~~~DPva~~~g~k~GdvvkI   59 (77)
T d1eika_          40 KTTDPVAKAIGAKRGDIVKI   59 (77)
T ss_dssp             BTTSHHHHGGGCCTTCEEEE
T ss_pred             cccCHhhhhhCCcCCcEEEE
Confidence            58899999999999998743


No 11 
>d1dzfa2 d.78.1.1 (A:144-215) Eukaryotic RPB5 C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=39.19  E-value=6.6  Score=26.25  Aligned_cols=20  Identities=25%  Similarity=0.200  Sum_probs=17.6

Q ss_pred             cCCHHHHHHhCCcccCEEEE
Q 022402          272 VKHPEVAQFLGGRLYDCVFK  291 (297)
Q Consensus       272 ~KC~~va~~lg~~~~~~v~~  291 (297)
                      .+-+|+|+.+|+++||+|=.
T Consensus        36 ~~~DPva~~~g~~~GdvikI   55 (72)
T d1dzfa2          36 QRADPVALYLGLKRGEVVKI   55 (72)
T ss_dssp             CTTCHHHHHHTCCTTCEEEE
T ss_pred             cccCHhhhhcCCCCCCEEEE
Confidence            48899999999999998744


No 12 
>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.91  E-value=29  Score=24.96  Aligned_cols=66  Identities=17%  Similarity=0.132  Sum_probs=41.9

Q ss_pred             ccCcHHHHHHHhccCCCCeEEEEec-CCChhhhhchHHHHHHHHhCCCEEEEEecCCcccccCChHHHHHHH
Q 022402          126 VIDDLETFKVKWSKKAWKKAVIFVD-NSGADIILGILPFARELLRRGTQVILAANDLPSINDVTYPELIEIM  196 (297)
Q Consensus       126 ~~dd~~~l~~~L~~~~~~~i~~i~D-NaGeeiv~Dll~L~~~L~~~g~~V~~~vK~~P~vnDvT~~D~~~~l  196 (297)
                      ..+|+.++.+.++.  .+++++|+- -.|-|+...+.   +.....|.+|+++-++.-.++..-.+++...+
T Consensus        23 ~~~d~~~l~~~~~~--~k~i~IvGgG~~G~E~A~~l~---~~~~~~g~~Vt~i~~~~~~l~~~~~~~~~~~~   89 (137)
T d1m6ia2          23 KIGDFRSLEKISRE--VKSITIIGGGFLGSELACALG---RKARALGTEVIQLFPEKGNMGKILPEYLSNWT   89 (137)
T ss_dssp             SHHHHHHHHHHHHH--CSEEEEECCSHHHHHHHHHHH---HHHHHHTCEEEEECSSSSTTTTTSCHHHHHHH
T ss_pred             CHHHHHHHHHHhhc--CCEEEEECCCHHHHHHHHHHH---HHHHhcCCEEEEecccccCCcccCCHHHHHHH
Confidence            34678888877764  478999963 33444433332   34455689999998876666655556665443


No 13 
>d1hmja_ d.78.1.1 (A:) RNA polymerase subunit RBP5 (RNA polymerase subunit H) {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=38.10  E-value=6.6  Score=25.94  Aligned_cols=20  Identities=25%  Similarity=0.164  Sum_probs=17.3

Q ss_pred             cCCHHHHHHhCCcccCEEEE
Q 022402          272 VKHPEVAQFLGGRLYDCVFK  291 (297)
Q Consensus       272 ~KC~~va~~lg~~~~~~v~~  291 (297)
                      .+-+|+|+.+|.++||+|=.
T Consensus        29 ~~~DPva~~~g~k~GdvvkI   48 (68)
T d1hmja_          29 YEDDPVIQEIGAKEGDVVRV   48 (68)
T ss_pred             cccCHHHHHhCCCCCcEEEE
Confidence            48899999999999997644


No 14 
>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}
Probab=36.46  E-value=39  Score=23.67  Aligned_cols=59  Identities=25%  Similarity=0.254  Sum_probs=39.7

Q ss_pred             cCcHHHHHHHhccCCCCeEEEEecCCChhhhhchHHHHHHHHhCCCEEEEEecCCcccccCChHHHHHH
Q 022402          127 IDDLETFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPSINDVTYPELIEI  195 (297)
Q Consensus       127 ~dd~~~l~~~L~~~~~~~i~~i~DNaGeeiv~Dll~L~~~L~~~g~~V~~~vK~~P~vnDvT~~D~~~~  195 (297)
                      ++|.+.+.+.+..  ++++++|+  +|. +  .+= +|..|.+.|.+|+++-++.-+.+  .-.++...
T Consensus        19 ~~d~~~l~~~~~~--~~~vvIiG--gG~-i--G~E-~A~~l~~~g~~Vtlv~~~~~l~~--~d~~~~~~   77 (122)
T d1xhca2          19 IFDADRIKESIEN--SGEAIIIG--GGF-I--GLE-LAGNLAEAGYHVKLIHRGAMFLG--LDEELSNM   77 (122)
T ss_dssp             HHHHHHHHHHHHH--HSEEEEEE--CSH-H--HHH-HHHHHHHTTCEEEEECSSSCCTT--CCHHHHHH
T ss_pred             HHHHHHHHHHhhc--CCcEEEEC--CcH-H--HHH-HHHHhhcccceEEEEeccccccC--CCHHHHHH
Confidence            3567777877764  47899987  455 3  333 56889999999999887644443  23445443


No 15 
>d2ax3a2 c.104.1.1 (A:1-211) Hypothetical protein TM0922, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=34.57  E-value=24  Score=27.90  Aligned_cols=44  Identities=18%  Similarity=0.249  Sum_probs=29.4

Q ss_pred             HHHHhccCCCCeEEEEe--cCCChhhhhchHHHHHHHHhCCCEEEEEecC
Q 022402          133 FKVKWSKKAWKKAVIFV--DNSGADIILGILPFARELLRRGTQVILAAND  180 (297)
Q Consensus       133 l~~~L~~~~~~~i~~i~--DNaGeeiv~Dll~L~~~L~~~g~~V~~~vK~  180 (297)
                      +.+.+.+...++|++++  -|-|.   .-+. +|++|...|.+|.++.-.
T Consensus        31 i~~~~~~~~~~~vlvl~G~GNNGG---DGl~-~Ar~L~~~g~~V~v~~~~   76 (211)
T d2ax3a2          31 MEEELGNLSDYRFLVLCGGGNNGG---DGFV-VARNLLGVVKDVLVVFLG   76 (211)
T ss_dssp             HHHHHSCCTTCEEEEEECSSHHHH---HHHH-HHHHHTTTSSEEEEEECC
T ss_pred             HHHhcccccCCcEEEEECCCCCch---hHHH-HHHHHHhcCCeeEEEecC
Confidence            33444432346888888  45555   3456 999999999999877643


No 16 
>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}
Probab=28.78  E-value=81  Score=21.41  Aligned_cols=53  Identities=9%  Similarity=0.043  Sum_probs=37.4

Q ss_pred             cHHHHHHHhccCCCCeEEEEecCCChhhhhchHHHHHHHHhCCCEEEEEecCCcccccC
Q 022402          129 DLETFKVKWSKKAWKKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPSINDV  187 (297)
Q Consensus       129 d~~~l~~~L~~~~~~~i~~i~DNaGeeiv~Dll~L~~~L~~~g~~V~~~vK~~P~vnDv  187 (297)
                      |+..+.+.+...++++|++|+  +|. +=.+   +|..|.+.|.+|+++.+..+...-.
T Consensus         9 ~~~~~~~~l~~~~~~~vvVvG--gG~-ig~E---~A~~l~~~g~~vt~i~~~~~~l~~~   61 (121)
T d1mo9a2           9 DHATLVEELDYEPGSTVVVVG--GSK-TAVE---YGCFFNATGRRTVMLVRTEPLKLIK   61 (121)
T ss_dssp             EHHHHHHHCCSCCCSEEEEEC--CSH-HHHH---HHHHHHHTTCEEEEECSSCTTTTCC
T ss_pred             eHHHHHHHHhhCCCCEEEEEC--CCH-HHHH---HHHHHHhcchhheEeeccchhhccc
Confidence            455566666655568999997  555 4333   4578888999999999987666433


No 17 
>d1cg5a_ a.1.1.2 (A:) Hemoglobin, alpha-chain {Cartilaginous fish akaei (Dasyatis akajei) [TaxId: 31902]}
Probab=27.46  E-value=33  Score=24.96  Aligned_cols=71  Identities=13%  Similarity=0.149  Sum_probs=41.6

Q ss_pred             CchHHHHHHHHHHHHHcccCCCCCCCchHHHHHHHHHHHH---HHhc---CCCCchHHHHHHHHHHHHHHHHHHHHHhhh
Q 022402            1 MLTSELRNLLKEILEDMKKDPETHGGPPDCILLCRLREQV---LREL---GFRDIFKKVKDEENAKAISLFGDVVRLNDV   74 (297)
Q Consensus         1 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~e~~l~~~i~~~~---~~~~---g~~DPf~~~K~~~n~~a~~~~~~l~~~l~~   74 (297)
                      |||+..+...++.+..+..+.  .....+  ++.|+++..   ...+   +..++   .-.+-...+..++..+...++.
T Consensus         1 ~Ls~~~k~~i~~sW~~v~~d~--~~~G~~--~~~rLF~~~P~~k~~F~~f~~~~~---~~~~l~~H~~~v~~~l~~~I~~   73 (141)
T d1cg5a_           1 VLSSQNKKAIEELGNLIKANA--EAWGAD--ALARLFELHPQTKTYFSKFSGFEA---CNEQVKKHGKRVMNALADATHH   73 (141)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTH--HHHHHH--HHHHHHHHCGGGGGGGTTCSCCST---TSHHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCHHHHHHHHHHHHHHHcCH--HHHHHH--HHHHHHHHChHHHHHHHHcCCCCc---CChHHHHHHHHHHHHHHHHHHh
Confidence            789999999999888887753  233344  777776653   1222   22221   1122334455566777777776


Q ss_pred             hhhh
Q 022402           75 IEDE   78 (297)
Q Consensus        75 ~~~~   78 (297)
                      +++.
T Consensus        74 Ldd~   77 (141)
T d1cg5a_          74 LDNL   77 (141)
T ss_dssp             TTSH
T ss_pred             ccch
Confidence            6653


No 18 
>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}
Probab=24.54  E-value=1.5e+02  Score=23.21  Aligned_cols=33  Identities=21%  Similarity=0.309  Sum_probs=21.1

Q ss_pred             eEEEEecCCChhhhhchHHHHHHHHhCCCEEEEEecC
Q 022402          144 KAVIFVDNSGADIILGILPFARELLRRGTQVILAAND  180 (297)
Q Consensus       144 ~i~~i~DNaGeeiv~Dll~L~~~L~~~g~~V~~~vK~  180 (297)
                      ++.+|+--++.   .... +++.|.+.|.+|+++-+.
T Consensus         8 K~alITGas~G---IG~a-ia~~la~~G~~Vv~~~r~   40 (261)
T d1geea_           8 KVVVITGSSTG---LGKS-MAIRFATEKAKVVVNYRS   40 (261)
T ss_dssp             CEEEETTCSSH---HHHH-HHHHHHHTTCEEEEEESS
T ss_pred             CEEEEeCCCcH---HHHH-HHHHHHHCCCEEEEEeCC
Confidence            45555555555   4666 677777777777777654


No 19 
>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=24.45  E-value=46  Score=26.78  Aligned_cols=35  Identities=20%  Similarity=0.198  Sum_probs=29.3

Q ss_pred             eEEEEecCCChhhhhchHHHHHHHHhCCCEEEEEecCCc
Q 022402          144 KAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLP  182 (297)
Q Consensus       144 ~i~~i~DNaGeeiv~Dll~L~~~L~~~g~~V~~~vK~~P  182 (297)
                      ++.+|+-=+|+   ...- |+++|++.|++|+.+.|..+
T Consensus         2 k~~LVTGatGf---iG~~-lv~~Ll~~g~~V~~~~r~~~   36 (339)
T d1n7ha_           2 KIALITGITGQ---DGSY-LTEFLLGKGYEVHGLIRRSS   36 (339)
T ss_dssp             CEEEEETTTSH---HHHH-HHHHHHHTTCEEEEEECCCS
T ss_pred             CEEEEeCCccH---HHHH-HHHHHHHCcCEEEEEECCCc
Confidence            56778888998   6886 99999999999999998543


No 20 
>d1vlja_ e.22.1.2 (A:) NADH-dependent butanol dehydrogenase A (TM0820) {Thermotoga maritima [TaxId: 2336]}
Probab=23.46  E-value=1.2e+02  Score=25.48  Aligned_cols=70  Identities=9%  Similarity=0.135  Sum_probs=43.9

Q ss_pred             CcHHHHHHHhccCCCCeEEEEecCCChhh--hhchHHHHHHHHhCCCEEEEEecCCcccccCChHHHHHHHHHhhhh
Q 022402          128 DDLETFKVKWSKKAWKKAVIFVDNSGADI--ILGILPFARELLRRGTQVILAANDLPSINDVTYPELIEIMSKLKDE  202 (297)
Q Consensus       128 dd~~~l~~~L~~~~~~~i~~i~DNaGeei--v~Dll~L~~~L~~~g~~V~~~vK~~P~vnDvT~~D~~~~l~~l~~~  202 (297)
                      +-++++-+.+++.+.+++++|+|.....-  +.|.  +.+.|.+.|.++...-.   +..++|.+++...++.+...
T Consensus        20 g~~~~l~~~l~~~g~~rvliVt~~~~~~~~g~~~~--l~~~L~~~gi~~~~f~~---v~~~pt~~~v~~~~~~~~~~   91 (398)
T d1vlja_          20 GTIPKIGEEIKNAGIRKVLFLYGGGSIKKNGVYDQ--VVDSLKKHGIEWVEVSG---VKPNPVLSKVHEAVEVAKKE   91 (398)
T ss_dssp             TCGGGHHHHHHHTTCCEEEEEECSSHHHHSSHHHH--HHHHHHHTTCEEEEECC---CCSSCBHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHhcCCCeEEEEECCcHHHHhhHHHH--HHHHHHhcCCeEEEEcC---ccCCCCHHHHHHHhhhcccc
Confidence            34455556665545579999998754322  3455  35677778877765411   33456788888877777643


No 21 
>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}
Probab=22.03  E-value=40  Score=26.95  Aligned_cols=35  Identities=23%  Similarity=0.451  Sum_probs=23.4

Q ss_pred             CeEEEEecCCChhhhhchHHHHHHHHhCCCEEEEEe
Q 022402          143 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAA  178 (297)
Q Consensus       143 ~~i~~i~DNaGeeiv~Dll~L~~~L~~~g~~V~~~v  178 (297)
                      |+|++.+==.|.++.=-+- |+++|.+.|++|+|+.
T Consensus         1 kkili~~~GtGGHv~~a~a-l~~~L~~~G~eV~~i~   35 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLA-VAHHLMAQGWQVRWLG   35 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHH-HHHHHHTTTCEEEEEE
T ss_pred             CEEEEEcCCcHHHHHHHHH-HHHHHHhCCCEEEEEE
Confidence            4677776322355655565 8888888888888764


No 22 
>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.64  E-value=1.5e+02  Score=22.87  Aligned_cols=33  Identities=24%  Similarity=0.376  Sum_probs=26.4

Q ss_pred             eEEEEecCCChhhhhchHHHHHHHHhCCCEEEEEecC
Q 022402          144 KAVIFVDNSGADIILGILPFARELLRRGTQVILAAND  180 (297)
Q Consensus       144 ~i~~i~DNaGeeiv~Dll~L~~~L~~~g~~V~~~vK~  180 (297)
                      ++.+|+==+|.   .... +++.|.+.|.+|+++-+.
T Consensus         7 K~alITGas~G---IG~a-ia~~la~~G~~Vi~~~r~   39 (245)
T d2ag5a1           7 KVIILTAAAQG---IGQA-AALAFAREGAKVIATDIN   39 (245)
T ss_dssp             CEEEESSTTSH---HHHH-HHHHHHHTTCEEEEEESC
T ss_pred             CEEEEeCCCCH---HHHH-HHHHHHHcCCEEEEEeCC
Confidence            55666666666   5887 899999999999999865


No 23 
>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.29  E-value=63  Score=26.06  Aligned_cols=34  Identities=21%  Similarity=0.276  Sum_probs=27.5

Q ss_pred             CeEEEEecCCChhhhhchHHHHHHHHhCCCEEEEEecC
Q 022402          143 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAAND  180 (297)
Q Consensus       143 ~~i~~i~DNaGeeiv~Dll~L~~~L~~~g~~V~~~vK~  180 (297)
                      |+|.+|+-=+|+   ..-- |+++|++.|++|+..+|.
T Consensus         1 kKI~LVTG~tGf---IG~~-l~~~Ll~~g~~V~~i~r~   34 (347)
T d1t2aa_           1 RNVALITGITGQ---DGSY-LAEFLLEKGYEVHGIVRR   34 (347)
T ss_dssp             CCEEEEETTTSH---HHHH-HHHHHHHTTCEEEEEECC
T ss_pred             CCEEEEecCCcH---HHHH-HHHHHHHCcCEEEEEECC
Confidence            367567777798   6776 889999999999998874


Done!