Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>022403
MAQAEEAKEVSKLSSCDAYFEAIQSRKKLPHSLQETLTAAFARIPVLSFPNVPGGRVIEI
MADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAA
AFSVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAP
TAADRLHEDFYKVILQEEPFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRN
VPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQPISDLGLPFMSSDEVKIS

High Scoring Gene Products

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  022403
        (297 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2114475 - symbol:KING1 "AT3G48530" species:370...   209  8.5e-34   2


>TAIR|locus:2114475 [details] [associations]
            symbol:KING1 "AT3G48530" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009505 "plant-type cell
            wall" evidence=IDA] InterPro:IPR000644 InterPro:IPR013785
            Pfam:PF00571 PROSITE:PS51371 SMART:SM00116 GO:GO:0005524
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003824
            Gene3D:3.20.20.70 GO:GO:0005975 GO:GO:0006633 GO:GO:0009505
            GO:GO:0042128 EMBL:AL133315 EMBL:AJ132317 EMBL:AY042839
            EMBL:AY081464 EMBL:AY087317 IPI:IPI00546485 PIR:T46197
            RefSeq:NP_190422.1 UniGene:At.20522 ProteinModelPortal:Q8LBB2
            SMR:Q8LBB2 IntAct:Q8LBB2 STRING:Q8LBB2 PaxDb:Q8LBB2 PRIDE:Q8LBB2
            EnsemblPlants:AT3G48530.1 GeneID:824012 KEGG:ath:AT3G48530
            GeneFarm:4897 TAIR:At3g48530 eggNOG:NOG268654 HOGENOM:HOG000238005
            InParanoid:Q8LBB2 OMA:KIHRIYV PhylomeDB:Q8LBB2
            ProtClustDB:CLSN2684044 Genevestigator:Q8LBB2 GermOnline:AT3G48530
            Uniprot:Q8LBB2
        Length = 424

 Score = 209 (78.6 bits), Expect = 8.5e-34, Sum P(2) = 8.5e-34
 Identities = 37/106 (34%), Positives = 64/106 (60%)

Query:   189 DFYKVILQEEPFKSTTVRSIIKSYRWAPFLPVATDDXXXXXXXXXXKYRLRNVPIIEPGT 248
             +F++V+   E +K+T VR I  ++RWAPFL +  ++          KY+++++P+++ G 
Sbjct:   163 NFFEVLTSSELYKNTKVRDISGTFRWAPFLALQKENSFLTMLLLLSKYKMKSIPVVDLGV 222

Query:   249 PDIKNYITQSAVVQGLEGCKGRDWFDIIASQPISDLGLPFMSSDEV 294
               I+N ITQS V+  L  C G  WF+    + +S++GLP MS D +
Sbjct:   223 AKIENIITQSGVIHMLAECAGLLWFEDWGIKTLSEVGLPIMSKDHI 268

 Score = 186 (70.5 bits), Expect = 8.5e-34, Sum P(2) = 8.5e-34
 Identities = 39/96 (40%), Positives = 58/96 (60%)

Query:    21 EAIQSRKKLPHSLQETLTAAFARIPVLSFPNVPGGRVIEIMADTTIPDAVKILSECNILS 80
             E +   +K   S  E L A F  IPV +FP     + IEI +DT++ +AV+ LS+  +LS
Sbjct:    33 EDLWDEQKPQLSPNEKLNACFESIPVSAFPLSSDSQDIEIRSDTSLAEAVQTLSKFKVLS 92

Query:    81 APVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAE 116
             APV   DAP  + W +RY+GIV++  I++W+L   E
Sbjct:    93 APVVDVDAPEDASWIDRYIGIVEFPGIVVWLLHQLE 128


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.134   0.394    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      297       224   0.00099  112 3  11 22  0.41    33
                                                     32  0.40    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  611 (65 KB)
  Total size of DFA:  179 KB (2103 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.75u 0.07s 16.82t   Elapsed:  00:00:02
  Total cpu time:  16.75u 0.07s 16.82t   Elapsed:  00:00:02
  Start:  Tue May 21 03:25:35 2013   End:  Tue May 21 03:25:37 2013

Back to top