BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022406
(297 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P54001|P4HA1_RAT Prolyl 4-hydroxylase subunit alpha-1 OS=Rattus norvegicus GN=P4ha1
PE=2 SV=2
Length = 534
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 110/219 (50%), Gaps = 26/219 (11%)
Query: 29 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTS 88
I+ P+K + KPR + ++D E + + +LAK +L R+ V D +G+ + R S
Sbjct: 322 ILAPAKQEDEWDKPRIIRFHDIISDAEIEIVKDLAKPRLSRATVHDPETGKLTTAQYRVS 381
Query: 89 SGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYFS----DKV 144
++ +D +++ I +I T L E++QV Y G +YEPH+D+ D
Sbjct: 382 KSAWLSGYEDPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAF 441
Query: 145 NIVRGGHRLATVLMYLSDVAKGGETVFPNAEQEPPRRRTPATNDDLSECAKKGIAVKPRR 204
+ G+R+AT L Y+SDV+ GG TVFP G +V P++
Sbjct: 442 RELGTGNRIATWLFYMSDVSAGGATVFPEV----------------------GASVWPKK 479
Query: 205 GDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIH 243
G A+ +++L + D + H+ CPV+ G KW + KW+H
Sbjct: 480 GTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWLH 518
>sp|Q60715|P4HA1_MOUSE Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus GN=P4ha1 PE=2
SV=2
Length = 534
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 26/219 (11%)
Query: 29 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTS 88
I+ P+K + KPR + ++D E + + +LAK +L+R+ +++ ++G + R S
Sbjct: 322 ILAPAKQEDEWDKPRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPVTGALETVHYRIS 381
Query: 89 SGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYFS----DKV 144
++ +D +++ I +I T L E++QV Y G +YEPH+D+ D
Sbjct: 382 KSAWLSGYEDPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAF 441
Query: 145 NIVRGGHRLATVLMYLSDVAKGGETVFPNAEQEPPRRRTPATNDDLSECAKKGIAVKPRR 204
+ G+R+AT L Y+SDV+ GG TVFP G +V P++
Sbjct: 442 RELGTGNRIATWLFYMSDVSAGGATVFPEV----------------------GASVWPKK 479
Query: 205 GDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIH 243
G A+ +++L + D + H+ CPV+ G KW + KW+H
Sbjct: 480 GTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWLH 518
>sp|Q5RAG8|P4HA1_PONAB Prolyl 4-hydroxylase subunit alpha-1 OS=Pongo abelii GN=P4HA1 PE=2
SV=1
Length = 534
Score = 112 bits (279), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 113/219 (51%), Gaps = 26/219 (11%)
Query: 29 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTS 88
I+ P+K + KPR + ++D E + + +LAK +L+R+ +++ ++G+ + R S
Sbjct: 322 ILAPAKQEDEWDKPRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPITGDLETVHYRIS 381
Query: 89 SGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYFS----DKV 144
++ ++ +++ I +I T L E++QV Y G +YEPH+D+ D
Sbjct: 382 KSAWLSGYENPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAF 441
Query: 145 NIVRGGHRLATVLMYLSDVAKGGETVFPNAEQEPPRRRTPATNDDLSECAKKGIAVKPRR 204
+ G+R+AT L Y+SDV+ GG TVFP G +V P++
Sbjct: 442 KELGTGNRIATWLFYMSDVSAGGATVFPEV----------------------GASVWPKK 479
Query: 205 GDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIH 243
G A+ +++L + D + H+ CPV+ G KW + KW+H
Sbjct: 480 GTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWLH 518
>sp|P13674|P4HA1_HUMAN Prolyl 4-hydroxylase subunit alpha-1 OS=Homo sapiens GN=P4HA1 PE=1
SV=2
Length = 534
Score = 112 bits (279), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 113/219 (51%), Gaps = 26/219 (11%)
Query: 29 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTS 88
I+ P+K + KPR + ++D E + + +LAK +L+R+ +++ ++G+ + R S
Sbjct: 322 ILAPAKQEDEWDKPRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPITGDLETVHYRIS 381
Query: 89 SGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYFS----DKV 144
++ ++ +++ I +I T L E++QV Y G +YEPH+D+ D
Sbjct: 382 KSAWLSGYENPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAF 441
Query: 145 NIVRGGHRLATVLMYLSDVAKGGETVFPNAEQEPPRRRTPATNDDLSECAKKGIAVKPRR 204
+ G+R+AT L Y+SDV+ GG TVFP G +V P++
Sbjct: 442 KELGTGNRIATWLFYMSDVSAGGATVFPEV----------------------GASVWPKK 479
Query: 205 GDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIH 243
G A+ +++L + D + H+ CPV+ G KW + KW+H
Sbjct: 480 GTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWLH 518
>sp|Q1RMU3|P4HA1_BOVIN Prolyl 4-hydroxylase subunit alpha-1 OS=Bos taurus GN=P4HA1 PE=1
SV=1
Length = 534
Score = 111 bits (277), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 112/219 (51%), Gaps = 26/219 (11%)
Query: 29 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTS 88
I+ P+K + KPR + ++D E + + +LAK +L+R+ +++ ++G+ + R S
Sbjct: 322 ILAPAKQEDEWDKPRIIRFHDIISDAEIEVVKDLAKPRLRRATISNPITGDLETVHYRIS 381
Query: 89 SGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYFS----DKV 144
++ ++ +++ I +I T L E++QV Y G +YEPH+D+ D
Sbjct: 382 KSAWLSGYENPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAF 441
Query: 145 NIVRGGHRLATVLMYLSDVAKGGETVFPNAEQEPPRRRTPATNDDLSECAKKGIAVKPRR 204
+ G+R+AT L Y+SDV GG TVFP G +V P++
Sbjct: 442 KELGTGNRIATWLFYMSDVLAGGATVFPEV----------------------GASVWPKK 479
Query: 205 GDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIH 243
G A+ +++L + D + H+ CPV+ G KW + KW+H
Sbjct: 480 GTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWLH 518
>sp|Q20065|P4HA2_CAEEL Prolyl 4-hydroxylase subunit alpha-2 OS=Caenorhabditis elegans
GN=phy-2 PE=1 SV=1
Length = 539
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 109/218 (50%), Gaps = 26/218 (11%)
Query: 30 INPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSS 89
+ P KV+ + + P A +++ + D E + + LA +LKR+ V ++ +GE + + R S
Sbjct: 313 LAPIKVEILRFDPLAVLFKNVIHDSEIEVIKELASPKLKRATVQNSKTGELEHATYRISK 372
Query: 90 GTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYF----SDKVN 145
++ D +I + +I +T L + E++QV Y G Y+PH+D+ +
Sbjct: 373 SAWLKGDLDPVIDRVNRRIEDFTNLNQATSEELQVANYGLGGHYDPHFDFARKEEKNAFK 432
Query: 146 IVRGGHRLATVLMYLSDVAKGGETVFPNAEQEPPRRRTPATNDDLSECAKKGIAVKPRRG 205
+ G+R+ATVL Y+S +GG TVF + G AV P +
Sbjct: 433 TLNTGNRIATVLFYMSQPERGGATVFNHL----------------------GTAVFPSKN 470
Query: 206 DALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIH 243
DAL +++L + D + H+ CPV+ G KW + KWIH
Sbjct: 471 DALFWYNLRRDGEGDLRTRHAACPVLLGVKWVSNKWIH 508
>sp|P16924|P4HA1_CHICK Prolyl 4-hydroxylase subunit alpha-1 OS=Gallus gallus GN=P4HA1 PE=1
SV=1
Length = 516
Score = 107 bits (268), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 107/219 (48%), Gaps = 26/219 (11%)
Query: 29 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTS 88
I+ P K + KPR + ++D E + + LAK +L R+ V D +G+ + R S
Sbjct: 304 ILGPVKQEDEWDKPRIVRFLDIISDEEIETVKELAKPRLSRATVHDPETGKLTTAHYRVS 363
Query: 89 SGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYFS----DKV 144
++ + +++ I +I T L E++QV Y G +YEPH+D+ D
Sbjct: 364 KSAWLSGYESPVVSRINTRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFGRKDEPDAF 423
Query: 145 NIVRGGHRLATVLMYLSDVAKGGETVFPNAEQEPPRRRTPATNDDLSECAKKGIAVKPRR 204
+ G+R+AT L Y+SDV+ GG TVFP G +V P++
Sbjct: 424 KELGTGNRIATWLFYMSDVSAGGATVFPEV----------------------GASVWPKK 461
Query: 205 GDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIH 243
G A+ +++L + D + H+ CPV+ G KW + KW+H
Sbjct: 462 GTAVFWYNLFPSGEGDYSTRHAACPVLVGNKWVSNKWLH 500
>sp|Q5ZLK5|P4HA2_CHICK Prolyl 4-hydroxylase subunit alpha-2 OS=Gallus gallus GN=P4HA2 PE=2
SV=1
Length = 534
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 106/217 (48%), Gaps = 24/217 (11%)
Query: 29 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTS 88
+I P K + P Y ++D E + + LAK +L R+ V D +G ++ R S
Sbjct: 324 LIAPFKEEDEWDSPHIVRYYDVMSDEEIEKIKQLAKPKLARATVRDPKTGVLTVASYRVS 383
Query: 89 SGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYFSDKVN--I 146
+++ + D ++A + ++ T L + E +QV Y G +YEPH+D+ + +
Sbjct: 384 KSSWLEEDDDPVVAKVNQRMQQITGLTVKTAELLQVANYGMGGQYEPHFDFSRRPFDSTL 443
Query: 147 VRGGHRLATVLMYLSDVAKGGETVFPNAEQEPPRRRTPATNDDLSECAKKGIAVKPRRGD 206
G+RLAT L Y+SDV GG TVFP+ G A+ P++G
Sbjct: 444 KSEGNRLATFLNYMSDVEAGGATVFPDF----------------------GAAIWPKKGT 481
Query: 207 ALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIH 243
A+ +++L + D + H+ CPV+ G KW + KW H
Sbjct: 482 AVFWYNLFRSGEGDYRTRHAACPVLVGCKWVSNKWFH 518
>sp|Q10576|P4HA1_CAEEL Prolyl 4-hydroxylase subunit alpha-1 OS=Caenorhabditis elegans
GN=dpy-18 PE=1 SV=2
Length = 559
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 108/219 (49%), Gaps = 26/219 (11%)
Query: 29 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTS 88
+ P KV+ + P A +++ ++D E + LAK +L R+ V D+++G+ + R S
Sbjct: 315 VYAPIKVEIKRFNPLAVLFKDVISDDEVAAIQELAKPKLARATVHDSVTGKLVTATYRIS 374
Query: 89 SGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYF----SDKV 144
++ + + ++ + +I T L E E++Q+ Y G Y+PH+D+ S
Sbjct: 375 KSAWLKEWEGDVVETVNKRIGYMTNLEMETAEELQIANYGIGGHYDPHFDHAKKEESKSF 434
Query: 145 NIVRGGHRLATVLMYLSDVAKGGETVFPNAEQEPPRRRTPATNDDLSECAKKGIAVKPRR 204
+ G+R+ATVL Y+S + GG TVF A+ + P +
Sbjct: 435 ESLGTGNRIATVLFYMSQPSHGGGTVFTEAKS----------------------TILPTK 472
Query: 205 GDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIH 243
DAL +++L+ +P + H+ CPV+ G KW + KWIH
Sbjct: 473 NDALFWYNLYKQGDGNPDTRHAACPVLVGIKWVSNKWIH 511
>sp|Q6W3E9|P4HA3_RAT Prolyl 4-hydroxylase subunit alpha-3 OS=Rattus norvegicus GN=P4ha3
PE=2 SV=1
Length = 544
Score = 104 bits (259), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 111/221 (50%), Gaps = 31/221 (14%)
Query: 29 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLS-DVRT 87
++ P++ + I +P +Y F++D E + LA+ L+RS VA SGE +L + R
Sbjct: 333 LLQPARKEVIHLRPLVALYHDFVSDEEAQKIRELAEPWLQRSVVA---SGEKQLQVEYRI 389
Query: 88 SSGTFIPKGKDAIIAGIEDKIATWTFLPKE--NGEDIQVLRYEHGQKYEPHYDYF---SD 142
S ++ D ++ ++ +IA T L + E +QV+ Y G YEPH+D+ S
Sbjct: 390 SKSAWLKDTVDPVLVTLDRRIAALTGLDIQPPYAEYLQVVNYGIGGHYEPHFDHATSPSS 449
Query: 143 KVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEQEPPRRRTPATNDDLSECAKKGIAVKP 202
+ ++ G+R AT+++YLS V GG T F +V
Sbjct: 450 PLYKMKSGNRAATLMIYLSSVEAGGATAF----------------------IYGNFSVPV 487
Query: 203 RRGDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIH 243
+ AL +++LH + D +LH+GCPV+ G+KW A KWIH
Sbjct: 488 VKNAALFWWNLHRSGEGDDDTLHAGCPVLVGDKWVANKWIH 528
>sp|Q60716|P4HA2_MOUSE Prolyl 4-hydroxylase subunit alpha-2 OS=Mus musculus GN=P4ha2 PE=2
SV=1
Length = 537
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 26/219 (11%)
Query: 29 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTS 88
+I P K + P Y ++D E + + +AK +L R+ V D +G ++ R S
Sbjct: 325 LIAPFKEEDEWDSPHIVRYYDVMSDEEIERIKEIAKPKLARATVRDPKTGVLTVASYRVS 384
Query: 89 SGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYF----SDKV 144
+++ + D ++A + ++ T L + E +QV Y G +YEPH+D+ D
Sbjct: 385 KSSWLEEDDDPVVARVNRRMQHITGLTVKTAELLQVANYGMGGQYEPHFDFSRSDDEDAF 444
Query: 145 NIVRGGHRLATVLMYLSDVAKGGETVFPNAEQEPPRRRTPATNDDLSECAKKGIAVKPRR 204
+ G+R+AT L Y+SDV GG TVFP+ G A+ P++
Sbjct: 445 KRLGTGNRVATFLNYMSDVEAGGATVFPDL----------------------GAAIWPKK 482
Query: 205 GDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIH 243
G A+ +++L + D + H+ CPV+ G KW + KW H
Sbjct: 483 GTAVFWYNLLRSGEGDYRTRHAACPVLVGCKWVSNKWFH 521
>sp|Q6W3F0|P4HA3_MOUSE Prolyl 4-hydroxylase subunit alpha-3 OS=Mus musculus GN=P4ha3 PE=2
SV=1
Length = 542
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 111/221 (50%), Gaps = 31/221 (14%)
Query: 29 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLS-DVRT 87
++ P++ + + +P +Y F++D E + LA+ L+RS VA SGE +L + R
Sbjct: 331 LLQPARKEVVHLRPLIALYHDFVSDEEAQKIRELAEPWLQRSVVA---SGEKQLQVEYRI 387
Query: 88 SSGTFIPKGKDAIIAGIEDKIATWTFLPKE--NGEDIQVLRYEHGQKYEPHYDYF---SD 142
S ++ D ++ ++ +IA T L + E +QV+ Y G YEPH+D+ S
Sbjct: 388 SKSAWLKDTVDPMLVTLDHRIAALTGLDIQPPYAEYLQVVNYGIGGHYEPHFDHATSPSS 447
Query: 143 KVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEQEPPRRRTPATNDDLSECAKKGIAVKP 202
+ ++ G+R+AT ++YLS V GG T F +V
Sbjct: 448 PLYRMKSGNRVATFMIYLSSVEAGGATAF----------------------IYGNFSVPV 485
Query: 203 RRGDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIH 243
+ AL +++LH + D +LH+GCPV+ G+KW A KWIH
Sbjct: 486 VKNAALFWWNLHRSGEGDGDTLHAGCPVLVGDKWVANKWIH 526
>sp|Q7Z4N8|P4HA3_HUMAN Prolyl 4-hydroxylase subunit alpha-3 OS=Homo sapiens GN=P4HA3 PE=1
SV=1
Length = 544
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 109/221 (49%), Gaps = 31/221 (14%)
Query: 29 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLS-DVRT 87
++ P + + I +P +Y F++D E + LA+ L+RS VA SGE +L + R
Sbjct: 333 LLQPIRKEVIHLEPYIALYHDFVSDSEAQKIRELAEPWLQRSVVA---SGEKQLQVEYRI 389
Query: 88 SSGTFIPKGKDAIIAGIEDKIATWTFLPKE--NGEDIQVLRYEHGQKYEPHYDYF---SD 142
S ++ D + + +IA T L E +QV+ Y G YEPH+D+ S
Sbjct: 390 SKSAWLKDTVDPKLVTLNHRIAALTGLDVRPPYAEYLQVVNYGIGGHYEPHFDHATSPSS 449
Query: 143 KVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEQEPPRRRTPATNDDLSECAKKGIAVKP 202
+ ++ G+R+AT ++YLS V GG T F A ++V
Sbjct: 450 PLYRMKSGNRVATFMIYLSSVEAGGATAFIYA----------------------NLSVPV 487
Query: 203 RRGDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIH 243
R AL +++LH + D +LH+GCPV+ G+KW A KWIH
Sbjct: 488 VRNAALFWWNLHRSGEGDSDTLHAGCPVLVGDKWVANKWIH 528
>sp|O15460|P4HA2_HUMAN Prolyl 4-hydroxylase subunit alpha-2 OS=Homo sapiens GN=P4HA2 PE=1
SV=1
Length = 535
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 26/219 (11%)
Query: 29 IINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTS 88
+I P K + P Y ++D E + + +AK +L R+ V D +G ++ R S
Sbjct: 323 LIAPFKEEDEWDSPHIVRYYDVMSDEEIERIKEIAKPKLARATVRDPKTGVLTVASYRVS 382
Query: 89 SGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYF----SDKV 144
+++ + D ++A + ++ T L + E +QV Y G +YEPH+D+ D
Sbjct: 383 KSSWLEEDDDPVVARVNRRMQHITGLTVKTAELLQVANYGVGGQYEPHFDFSRNDERDTF 442
Query: 145 NIVRGGHRLATVLMYLSDVAKGGETVFPNAEQEPPRRRTPATNDDLSECAKKGIAVKPRR 204
+ G+R+AT L Y+SDV GG TVFP+ G A+ P++
Sbjct: 443 KHLGTGNRVATFLNYMSDVEAGGATVFPDL----------------------GAAIWPKK 480
Query: 205 GDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIH 243
G A+ +++L + D + H+ CPV+ G KW + KW H
Sbjct: 481 GTAVFWYNLLRSGEGDYRTRHAACPVLVGCKWVSNKWFH 519
>sp|Q5UP57|P4H_MIMIV Putative prolyl 4-hydroxylase OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L593 PE=1 SV=1
Length = 242
Score = 102 bits (253), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 97/211 (45%), Gaps = 34/211 (16%)
Query: 43 RAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIA 102
+ FV + +C ++ A +L S V LSG K ++R S +I K + ++
Sbjct: 59 KPFVLNNLINPTKCQEIMQFANGKLFDSQV---LSGTDK--NIRNSQQMWISKN-NPMVK 112
Query: 103 GIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYFSDKVN-----IVRGGHRLATVL 157
I + I +P +N ED+QV+RY Q Y H+D D I RGG R+ TVL
Sbjct: 113 PIFENICRQFNVPFDNAEDLQVVRYLPNQYYNEHHDSCCDSSKQCSEFIERGGQRILTVL 172
Query: 158 MYLSDVAKGGETVFPNAEQEPPRRRTPATNDDLSECAKKGIAVKPRRGDALLFFSLHTNA 217
+YL++ G T FPN Q+ KP+ GDAL+F+ L N+
Sbjct: 173 IYLNNEFSDGHTYFPNLNQK----------------------FKPKTGDALVFYPLANNS 210
Query: 218 IP-DPVSLHSGCPVIEGEKWSATKWIHVDSF 247
P SLH+G PV GEKW A W F
Sbjct: 211 NKCHPYSLHAGMPVTSGEKWIANLWFRERKF 241
>sp|Q75UG4|P4HA3_BOVIN Prolyl 4-hydroxylase subunit alpha-3 OS=Bos taurus GN=P4HA3 PE=2
SV=1
Length = 544
Score = 101 bits (251), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 31/227 (13%)
Query: 23 SFSSTAIINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKL 82
S S ++ P + + I +P +Y F++D E + LA+ L+RS VA SGE +L
Sbjct: 327 SSSPYLLLQPVRKEVIHLEPYVVLYHDFVSDAEAQTIRGLAEPWLQRSVVA---SGEKQL 383
Query: 83 S-DVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKE--NGEDIQVLRYEHGQKYEPHYDY 139
+ R S ++ D ++ ++ +IA T L + E +QV+ Y G YEPH+D+
Sbjct: 384 PVEYRISKSAWLKDTVDPVLVTLDHRIAALTGLDVQPPYAEYLQVVNYGIGGHYEPHFDH 443
Query: 140 F---SDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEQEPPRRRTPATNDDLSECAKK 196
S + + G+R+AT ++YLS V GG T F
Sbjct: 444 ATSPSSPLYRMNSGNRVATFMIYLSSVEAGGATAF----------------------IYG 481
Query: 197 GIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIH 243
+V + AL +++LH + D +LH+ CPV+ G+KW A KWIH
Sbjct: 482 NFSVPVVKNAALFWWNLHRSGEGDGDTLHAACPVLVGDKWVANKWIH 528
>sp|Q9NXG6|P4HTM_HUMAN Transmembrane prolyl 4-hydroxylase OS=Homo sapiens GN=P4HTM PE=1
SV=2
Length = 502
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 88/194 (45%), Gaps = 37/194 (19%)
Query: 85 VRTSSGTFIPKGKDA--IIAGIEDKIATWTFLPKEN---GEDIQVLRYEHGQKYEPHYD- 138
VR S T++ +G+ A I+ I ++ T L E E +QV+RY G Y H D
Sbjct: 272 VRNSHHTWLYQGEGAHHIMRAIRQRVLRLTRLSPEIVELSEPLQVVRYGEGGHYHAHVDS 331
Query: 139 -------------YFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEQEPPRRRTPA 185
+++ R TVL YL++V GGETVFP A+ +
Sbjct: 332 GPVYPETICSHTKLVANESVPFETSCRYMTVLFYLNNVTGGGETVFPVADNRTYDEMSLI 391
Query: 186 TND-DLSE----CAKKGIAVKPRRGDALLFFSLHTNAIPD---------PVSLHSGCPVI 231
+D DL + C K + VKP++G A+ ++ N +PD SLH GC V
Sbjct: 392 QDDVDLRDTRRHCDKGNLRVKPQQGTAVFWY----NYLPDGQGWVGDVDDYSLHGGCLVT 447
Query: 232 EGEKWSATKWIHVD 245
G KW A WI+VD
Sbjct: 448 RGTKWIANNWINVD 461
Score = 35.8 bits (81), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 35 VKQISWKPRAFVYEGFLTDLECDHLINLAKSQ-LKRSAVADNLSGESKLSDVRTSS 89
++ +S KP F GFLTD EC +I+LA+ + L+RS + E +S ++ S
Sbjct: 135 IRTLSLKPLLFEIPGFLTDEECRLIIHLAQMKGLQRSQILPTEEYEEAMSTMQVSQ 190
>sp|Q8BG58|P4HTM_MOUSE Transmembrane prolyl 4-hydroxylase OS=Mus musculus GN=P4htm PE=2
SV=1
Length = 503
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 88/194 (45%), Gaps = 37/194 (19%)
Query: 85 VRTSSGTFIPKGKDA--IIAGIEDKIATWTFLPKEN---GEDIQVLRYEHGQKYEPHYD- 138
VR S T++ +G+ A ++ I ++ T L E E +QV+RY G Y H D
Sbjct: 273 VRNSHHTWLHQGEGAHHVMRAIRQRVLRLTRLSPEIVEFSEPLQVVRYGEGGHYHAHVDS 332
Query: 139 -------------YFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEQEPPRRRTPA 185
+++ R TVL YL++V GGETVFP A+ +
Sbjct: 333 GPVYPETICSHTKLVANESVPFETSCRYMTVLFYLNNVTGGGETVFPVADNRTYDEMSLI 392
Query: 186 TND-DLSE----CAKKGIAVKPRRGDALLFFSLHTNAIPD---------PVSLHSGCPVI 231
+D DL + C K + VKP++G A+ ++ N +PD SLH GC V
Sbjct: 393 QDDVDLRDTRRHCDKGNLRVKPQQGTAVFWY----NYLPDGQGWVGEVDDYSLHGGCLVT 448
Query: 232 EGEKWSATKWIHVD 245
G KW A WI+VD
Sbjct: 449 RGTKWIANNWINVD 462
Score = 34.3 bits (77), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 35 VKQISWKPRAFVYEGFLTDLECDHLINLAKSQ-LKRSAVADNLSGESKLSDVRTSS 89
++ +S KP F GFL+D EC +I+LA+ + L+RS + E +S ++ S
Sbjct: 136 IRTLSLKPLLFEIPGFLSDEECRLIIHLAQMKGLQRSQILPTEEYEEAMSAMQVSQ 191
>sp|Q19269|NAS14_CAEEL Zinc metalloproteinase nas-14 OS=Caenorhabditis elegans GN=nas-14
PE=2 SV=2
Length = 503
Score = 37.0 bits (84), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 6/41 (14%)
Query: 257 CTDNNASCERWAALGECTKNPEYMVGSAQLPGFCRRSCKVC 297
C D NA C W LG C + +YM +CR++C +C
Sbjct: 380 CEDLNAHCGMWEQLGHCQHSVKYMA------HYCRKACNLC 414
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 6/41 (14%)
Query: 257 CTDNNASCERWAALGECTKNPEYMVGSAQLPGFCRRSCKVC 297
C D N C WA +GEC ++M FC+ SC C
Sbjct: 469 CEDKNLFCSYWAKIGECNSESKFM------KIFCKASCGKC 503
>sp|Q19673|TYR3_CAEEL Putative tyrosinase-like protein tyr-3 OS=Caenorhabditis elegans
GN=tyr-3 PE=3 SV=5
Length = 693
Score = 35.8 bits (81), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 6/42 (14%)
Query: 256 DCTDNNASCERWAALGECTKNPEYMVGSAQLPGFCRRSCKVC 297
+C+D + +C W+ GEC KNP +M + CR SC+ C
Sbjct: 515 ECSDRHTNCAMWSRSGECNKNPLWMSEN------CRSSCQKC 550
Score = 35.4 bits (80), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 7/43 (16%)
Query: 255 GDCTDNNASCERWAALGECTKNPEYMVGSAQLPGFCRRSCKVC 297
G C D + C WA GEC KN +P CRRSC C
Sbjct: 632 GPCADYHYDCAAWARRGECLKN-------KWMPENCRRSCNTC 667
Score = 34.7 bits (78), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 6/41 (14%)
Query: 257 CTDNNASCERWAALGECTKNPEYMVGSAQLPGFCRRSCKVC 297
C + N C W+A GEC KNP YM +C+ SC+ C
Sbjct: 472 CFNENECCGPWSAKGECQKNPVYMN------VWCKASCRQC 506
Score = 31.2 bits (69), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 6/41 (14%)
Query: 257 CTDNNASCERWAALGECTKNPEYMVGSAQLPGFCRRSCKVC 297
C + + C WA G+C NP YM C+ SC VC
Sbjct: 591 CYNEDQCCPIWAQRGQCRSNPGYMTCQ------CKVSCGVC 625
>sp|Q05305|VG88_BPML5 Gene 88 protein OS=Mycobacterium phage L5 GN=88 PE=4 SV=1
Length = 239
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 14/110 (12%)
Query: 108 IATWTFLPKENGEDIQVLRYE---------HGQKYEPHYDYFS---DKVNIVRGGHRLAT 155
+A W + ++N D+Q Y H Q+ + YFS D +++ R
Sbjct: 122 VAAWGRVIRDN-PDVQFWAYTRVQTAAVYLHSQRLDNLALYFSADPDNIDVARFLEDKGI 180
Query: 156 VLMYLSDVAKGGETVFPNAEQEPPRRRT-PATNDDLSECAKKGIAVKPRR 204
+ Y+ G+ FP A + P + ND S CA+ G+ V RR
Sbjct: 181 NIAYVDTTFAKGKAEFPTAVRCPENNKAIDLINDKGSACARCGLCVNGRR 230
>sp|Q23490|MLT7_CAEEL Peroxidase mlt-7 OS=Caenorhabditis elegans GN=mlt-7 PE=1 SV=1
Length = 724
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 257 CTDNNASCERWAALGECTKNPEYMVGSAQL 286
C D++ C WA++GEC N ++M + QL
Sbjct: 42 CCDHHEWCRFWASIGECNANKDWMTENCQL 71
>sp|B3ERM8|LON_AMOA5 Lon protease OS=Amoebophilus asiaticus (strain 5a2) GN=lon PE=3
SV=1
Length = 827
Score = 32.0 bits (71), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 71 AVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATW-------TFLPKENGEDIQ 123
A +L + K+ D +G +GK + GI++KI L KEN +DIQ
Sbjct: 713 AALASLYTQRKVKDKVAMTGEITLRGKVLPVGGIKEKILAAKRAGIKEVILSKENKKDIQ 772
Query: 124 VLRYEHGQKYEPHYDYFSDKV 144
++ + Q + HY F ++V
Sbjct: 773 EIKQKDIQDLKFHYVEFVEEV 793
>sp|Q921W4|QORL1_MOUSE Quinone oxidoreductase-like protein 1 OS=Mus musculus GN=Cryzl1
PE=2 SV=1
Length = 348
Score = 31.6 bits (70), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 86 RTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLR-YEHGQKYEPHYDYFSDKV 144
R SG + G+ +D++ L E+ +V+R +EH ++P +++
Sbjct: 64 REVSGIVLEVGRKVTFFQPDDEVVGILPLDSEDPGLCEVIRVHEHYLVHKPEKVSWTEAA 123
Query: 145 NIVRGGHRLATVLMYLSDVAKG 166
++R G R T L YLS ++ G
Sbjct: 124 GVIRDGVRACTALYYLSQLSPG 145
>sp|Q6WIH4|MEP4_ARTOT Extracellular metalloproteinase 4 OS=Arthroderma otae GN=MEP4 PE=1
SV=1
Length = 649
Score = 31.6 bits (70), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Query: 244 VDSFDKIVEEGGDCTDNNASCERWAALGE------CTKNPEYMVGSAQLPGFC 290
V + D I++ + T CE W A + NPE VGS+++PG C
Sbjct: 597 VQARDAIIDADMNLTKGANRCELWKAFAKRGLGVGAAYNPEKRVGSSRVPGGC 649
>sp|C5FIK0|MEP4_ARTOC Extracellular metalloproteinase 4 OS=Arthroderma otae (strain ATCC
MYA-4605 / CBS 113480) GN=MEP4 PE=3 SV=2
Length = 649
Score = 31.6 bits (70), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Query: 244 VDSFDKIVEEGGDCTDNNASCERWAALGE------CTKNPEYMVGSAQLPGFC 290
V + D I++ + T CE W A + NPE VGS+++PG C
Sbjct: 597 VQARDAIIDADMNLTKGANRCELWKAFAKRGLGVGAAYNPEKRVGSSRVPGGC 649
>sp|Q21388|NAS10_CAEEL Zinc metalloproteinase nas-10 OS=Caenorhabditis elegans GN=nas-10
PE=2 SV=1
Length = 560
Score = 31.2 bits (69), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Query: 244 VDSFDKIVEEGGDCTDNNASCERWAALGECTKNPEYMVGSAQLPGFCRRSCKVC 297
V+ +K+ + C D N C W AL + NP + V + CR+SC C
Sbjct: 511 VEILNKMYCKSAGCDDKNVYCGAW-ALQDLCNNPNHNV---WMRSNCRKSCNFC 560
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 118,696,219
Number of Sequences: 539616
Number of extensions: 5182483
Number of successful extensions: 10358
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 10288
Number of HSP's gapped (non-prelim): 40
length of query: 297
length of database: 191,569,459
effective HSP length: 117
effective length of query: 180
effective length of database: 128,434,387
effective search space: 23118189660
effective search space used: 23118189660
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)