Query 022406
Match_columns 297
No_of_seqs 295 out of 1474
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 04:59:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022406.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022406hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jig_A Prolyl-4 hydroxylase; h 100.0 2.3E-54 8E-59 383.7 20.3 217 26-249 4-222 (224)
2 3itq_A Prolyl 4-hydroxylase, a 100.0 6E-51 2.1E-55 359.5 14.0 187 33-248 30-216 (216)
3 3dkq_A PKHD-type hydroxylase S 100.0 1.6E-33 5.5E-38 252.0 8.7 176 36-248 13-199 (243)
4 2hbt_A EGL nine homolog 1; pro 99.9 6.5E-24 2.2E-28 190.6 15.8 171 42-247 26-216 (247)
5 2k72_A Matrix metalloproteinas 99.5 2.1E-15 7E-20 95.7 1.2 36 256-297 2-37 (37)
6 3kt7_A PKHD-type hydroxylase T 99.3 3.3E-11 1.1E-15 118.4 12.6 178 38-247 29-231 (633)
7 2rg4_A Uncharacterized protein 98.6 1E-07 3.5E-12 83.4 7.9 102 122-245 105-208 (216)
8 2rdq_A 1-deoxypentalenic acid 97.9 4.3E-05 1.5E-09 68.7 9.8 194 35-245 25-253 (288)
9 2fct_A Syringomycin biosynthes 97.8 0.00028 9.7E-09 64.1 14.2 186 43-242 22-258 (313)
10 2a1x_A Phytanoyl-COA dioxygena 97.7 0.00018 6.2E-09 65.3 10.9 199 30-244 23-254 (308)
11 3emr_A ECTD; double stranded b 97.2 0.00035 1.2E-08 64.0 6.0 196 35-243 40-267 (310)
12 2opw_A Phyhd1 protein; double- 97.2 0.0017 6E-08 58.1 10.2 99 130-242 150-264 (291)
13 2iuw_A Alkylated repair protei 97.2 0.0027 9.4E-08 55.9 10.7 178 34-239 28-225 (238)
14 3gja_A CYTC3; halogenase, beta 96.8 0.0096 3.3E-07 54.5 11.6 191 35-242 17-260 (319)
15 3s57_A Alpha-ketoglutarate-dep 96.8 0.0077 2.7E-07 51.7 10.2 175 36-239 4-198 (204)
16 3tht_A Alkylated DNA repair pr 96.2 0.012 4E-07 54.7 7.7 99 38-141 107-219 (345)
17 3i3q_A Alpha-ketoglutarate-dep 95.8 0.16 5.4E-06 43.8 12.8 108 99-239 84-198 (211)
18 3nnf_A CURA; non-HAEM Fe(II)/a 95.4 0.033 1.1E-06 50.5 7.0 126 43-173 41-177 (344)
19 2lg4_A Aurelin; antimicrobial 90.2 0.044 1.5E-06 33.9 0.0 12 286-297 29-40 (40)
20 1bei_A SHK-DNP22, potassium ch 89.0 0.11 3.6E-06 30.8 0.6 32 256-297 2-35 (35)
21 1w9y_A 1-aminocyclopropane-1-c 85.5 2.5 8.4E-05 38.3 8.0 89 121-245 156-254 (319)
22 1bgk_A BGK; neurotoxin, potass 84.6 0.31 1.1E-05 29.1 1.0 34 257-297 2-37 (37)
23 1gp6_A Leucoanthocyanidin diox 72.9 11 0.00039 34.4 8.2 89 121-246 211-309 (356)
24 3pl0_A Uncharacterized protein 69.1 8.3 0.00028 33.9 6.0 70 151-247 171-250 (254)
25 1dcs_A Deacetoxycephalosporin 68.8 9.5 0.00033 34.2 6.6 48 197-245 212-268 (311)
26 1xta_A Natrin 1; crisp, serine 64.9 1.4 4.7E-05 37.8 0.1 34 254-295 182-215 (221)
27 2cq7_A Cysteine-rich secretory 57.8 5.1 0.00017 26.1 1.8 30 258-295 12-41 (49)
28 1rju_V Metallothionein; Cu(I)- 55.2 4.5 0.00015 23.6 1.1 8 288-295 14-21 (36)
29 3oox_A Putative 2OG-Fe(II) oxy 50.8 37 0.0013 30.2 7.1 103 121-260 170-286 (312)
30 1o51_A Hypothetical protein TM 41.4 36 0.0012 25.9 4.6 74 55-128 31-114 (114)
31 2pp6_A Gifsy-2 prophage ATP-bi 41.1 22 0.00076 26.6 3.2 26 200-246 62-87 (102)
32 1nx8_A CARC, carbapenem syntha 40.9 25 0.00085 30.3 4.2 40 196-243 230-271 (273)
33 2wbq_A L-arginine beta-hydroxy 40.3 27 0.00093 31.6 4.5 43 196-246 295-341 (358)
34 2og5_A Putative oxygenase; non 39.8 26 0.00089 31.8 4.3 42 197-246 291-336 (357)
35 1odm_A Isopenicillin N synthas 39.1 36 0.0012 30.5 5.1 47 197-245 239-289 (331)
36 2dbn_A Hypothetical protein YB 36.6 12 0.00042 35.6 1.5 41 197-246 364-406 (461)
37 3pvj_A Alpha-ketoglutarate-dep 35.2 25 0.00086 30.8 3.3 37 131-173 92-128 (277)
38 1otj_A Alpha-ketoglutarate-dep 34.4 29 0.00099 30.1 3.6 34 134-173 97-130 (283)
39 1ds1_A Clavaminate synthase 1; 32.8 40 0.0014 29.9 4.3 43 195-245 257-303 (324)
40 1otj_A Alpha-ketoglutarate-dep 32.5 44 0.0015 28.9 4.4 41 197-245 235-276 (283)
41 1oih_A Putative alkylsulfatase 31.7 33 0.0011 30.1 3.5 38 130-173 102-139 (301)
42 3o2g_A Gamma-butyrobetaine dio 30.8 44 0.0015 30.8 4.3 43 195-245 326-371 (388)
43 2a05_A Cysteine-rich secretory 29.9 15 0.00053 24.5 0.7 29 259-295 23-51 (57)
44 1aqs_A Cu-MT, Cu-metallothione 28.8 18 0.00061 22.8 0.8 8 288-295 18-25 (53)
45 3r1j_A Alpha-ketoglutarate-dep 28.7 38 0.0013 30.0 3.4 37 131-173 98-134 (301)
46 2ddb_A Pseudecin, channel bloc 27.7 13 0.00045 31.3 0.1 32 256-295 173-204 (210)
47 2q4a_A Clavaminate synthase-li 27.4 32 0.0011 30.6 2.6 39 129-173 113-151 (330)
48 3dqy_A Toluene 1,2-dioxygenase 26.2 90 0.0031 22.6 4.6 29 197-234 25-53 (106)
49 3on7_A Oxidoreductase, iron/as 23.1 74 0.0025 27.8 4.2 89 121-245 151-255 (280)
50 1nx8_A CARC, carbapenem syntha 23.0 36 0.0012 29.3 2.0 38 131-174 96-135 (273)
51 2q4a_A Clavaminate synthase-li 20.8 51 0.0017 29.2 2.6 37 195-240 291-327 (330)
No 1
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=100.00 E-value=2.3e-54 Score=383.67 Aligned_cols=217 Identities=52% Similarity=0.923 Sum_probs=193.8
Q ss_pred CccccCCceeEEeccCCcEEEEcCCCCHHHHHHHHHHHhcccccceeeeCCCCcccccccccccccccCCCchHHHHHHH
Q 022406 26 STAIINPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIE 105 (297)
Q Consensus 26 ~~~~~~p~kve~ls~~P~i~~i~nfLs~~Ec~~li~~a~~~~~~s~v~~~~~g~~~~~~~R~s~~~~l~~~~~~v~~~i~ 105 (297)
+-.-+.|.|||+||++|+|++|+||||++||++||+++++.+++|+++++.+|..+.+++|+|.++|++..+++++++|+
T Consensus 4 ~~~~~~~~k~e~ls~~P~i~~~~~fLs~~Ec~~li~~~~~~~~~s~v~~~~~g~~~~~~~R~s~~~~l~~~~~~~~~~i~ 83 (224)
T 2jig_A 4 ELKEEWRGEVVHLSWSPRAFLLKNFLSDEECDYIVEKARPKMVKSSVVDNESGKSVDSEIRTSTGTWFAKGEDSVISKIE 83 (224)
T ss_dssp ---CCCCCCEEEEETTTTEEEETTCSCHHHHHHHHHHHGGGCEECEEEETTTTEEEECSSBCSEEEECCTTCSHHHHHHH
T ss_pred CcccccCcceEEEeCCCCEEEEcccCCHHHHHHHHHHhhccCeeeeeecCCCCcccccCCEEEeeeEecCCCCHHHHHHH
Confidence 33446799999999999999999999999999999999999999999877667667788999999999976789999999
Q ss_pred HHHHHhcCCCCCCCccceeeecCCCCccccccccccCcccc--cCCCceeEEEEEeecCCCCCcccccCCCCCCCCCCCC
Q 022406 106 DKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYFSDKVNI--VRGGHRLATVLMYLSDVAKGGETVFPNAEQEPPRRRT 183 (297)
Q Consensus 106 ~ri~~~~~~p~~~~E~~qv~rY~~G~~y~~H~D~~~~~~~~--~~~~~R~~T~liYLnd~~~GGeT~Fp~~~~~~~~~~~ 183 (297)
+||.+++++|....|++||+||++|++|++|+|++....+. ..+++|++|+|+||||+++||||+||.....
T Consensus 84 ~ri~~~~gl~~~~~e~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~------ 157 (224)
T 2jig_A 84 KRVAQVTMIPLENHEGLQVLHYHDGQKYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAEQK------ 157 (224)
T ss_dssp HHHHHHHTCCGGGBCCCEEEEEETTCCEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTSSSC------
T ss_pred HHHHHHhCCCcccccceEEEecCCCccccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCcccc------
Confidence 99999999999999999999999999999999998653211 2357999999999999999999999986421
Q ss_pred CCCCCcchhhhcCCeeEecCcccEEEeeecCCCCCCCCCccccCCcccccceEEEEEEEeccCccc
Q 022406 184 PATNDDLSECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIHVDSFDK 249 (297)
Q Consensus 184 ~~~~~~~~~C~~~~~~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~~~~~~ 249 (297)
.+++.+++|.+.+++|+|++|+||||+|+++||+.|++++|+||||++|+||++++||+.++++.
T Consensus 158 -~~~~~~~~c~~~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~~~~~~ 222 (224)
T 2jig_A 158 -VTGDGWSECAKRGLAVKPIKGDALMFYSLKPDGSNDPASLHGSCPTLKGDKWSATKWIHVAPIGG 222 (224)
T ss_dssp -CCSTTSCTTGGGSEEECCCTTCEEEEESBCTTSCBCGGGCEEECCEEESEEEEEEEEEESSCCCC
T ss_pred -cccccccccccCceEEecccCcEEEEEeeCCCCCCCCCCcccCCccccceEEEEEEeEEcCCcCC
Confidence 34677899998899999999999999999999999999999999999999999999999998853
No 2
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=100.00 E-value=6e-51 Score=359.47 Aligned_cols=187 Identities=38% Similarity=0.727 Sum_probs=166.4
Q ss_pred ceeEEeccCCcEEEEcCCCCHHHHHHHHHHHhcccccceeeeCCCCcccccccccccccccCCCchHHHHHHHHHHHHhc
Q 022406 33 SKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWT 112 (297)
Q Consensus 33 ~kve~ls~~P~i~~i~nfLs~~Ec~~li~~a~~~~~~s~v~~~~~g~~~~~~~R~s~~~~l~~~~~~v~~~i~~ri~~~~ 112 (297)
.+|+++|++|+|++++||||++||++|++++++.+++|++... ...+++|+|+++|++. ++++++|++||++++
T Consensus 30 v~v~~l~~~P~i~~~~~fLs~~Ec~~Li~~a~~~l~~s~v~~~----~~~~~~RtS~~~wl~~--~~~v~~i~~Ri~~~~ 103 (216)
T 3itq_A 30 IQIISKFEEPLIVVLGNVLSDEECDELIELSKSKLARSKVGSS----RDVNDIRTSSGAFLDD--NELTAKIEKRISSIM 103 (216)
T ss_dssp EEEEEEETTTTEEEEESCSCHHHHHHHHHHHHHHHC------------CCCCGGGTTCEECCC--CHHHHHHHHHHHHHH
T ss_pred EEEEEeeCCCCEEEECCcCCHHHHHHHHHHhhcccccceeccC----CccCCcEeeeeEEeCC--cHHHHHHHHHHHHhc
Confidence 4789999999999999999999999999999999999988321 3567899999999986 899999999999999
Q ss_pred CCCCCCCccceeeecCCCCccccccccccCcccccCCCceeEEEEEeecCCCCCcccccCCCCCCCCCCCCCCCCCcchh
Q 022406 113 FLPKENGEDIQVLRYEHGQKYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEQEPPRRRTPATNDDLSE 192 (297)
Q Consensus 113 ~~p~~~~E~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~~ 192 (297)
+++..++|.+||+||++||+|++|+|++..... ...++|++|+|+||||+++||||+||..
T Consensus 104 gl~~~~~E~lqv~~Y~~G~~y~~H~D~~~~~~~-~~~~~R~~T~l~YLnd~~~GGeT~Fp~~------------------ 164 (216)
T 3itq_A 104 NVPASHGEGLHILNYEVDQQYKAHYDYFAEHSR-SAANNRISTLVMYLNDVEEGGETFFPKL------------------ 164 (216)
T ss_dssp TSCGGGBCCCEEEEECBTCCEEEECSSCCTTSG-GGGGCEEEEEEEECSCCSEECCEEETTT------------------
T ss_pred CceeccccceeEEEeCCCCccccccCCCcCCCc-ccCCceEEEEEEecccCCcCceeEecCC------------------
Confidence 999999999999999999999999999875321 2247899999999999999999999985
Q ss_pred hhcCCeeEecCcccEEEeeecCCCCCCCCCccccCCcccccceEEEEEEEeccCcc
Q 022406 193 CAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIHVDSFD 248 (297)
Q Consensus 193 C~~~~~~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~~~~~ 248 (297)
+++|+|++|+||+|+|+++||+.|++++|+||||++|+||++|+|||.++|.
T Consensus 165 ----~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~~~~~~ 216 (216)
T 3itq_A 165 ----NLSVHPRKGMAVYFEYFYQDQSLNELTLHGGAPVTKGEKWIATQWVRRGTYK 216 (216)
T ss_dssp ----TEEECCCTTCEEEEECCCSSHHHHHTTCEEECCEEESCEEEEEEEEESSCCC
T ss_pred ----CCEEecCCCeEEEEeccCCCCCCCCccccccceeccccEEEEEeeEecCCcC
Confidence 7999999999999999999999999999999999999999999999999873
No 3
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=100.00 E-value=1.6e-33 Score=251.99 Aligned_cols=176 Identities=18% Similarity=0.234 Sum_probs=137.4
Q ss_pred EEeccCCcEEEEcCCCCHHHHHHHHHHHhc-ccccceeeeCCCCcccccccccccccccCCCchHHHHHHHHHHHHhcCC
Q 022406 36 KQISWKPRAFVYEGFLTDLECDHLINLAKS-QLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFL 114 (297)
Q Consensus 36 e~ls~~P~i~~i~nfLs~~Ec~~li~~a~~-~~~~s~v~~~~~g~~~~~~~R~s~~~~l~~~~~~v~~~i~~ri~~~~~~ 114 (297)
|-|-..+.+++|+||||++||++||++++. .+.++.+.. | .....+|++. ++.. ++++++.|++||..+++.
T Consensus 13 ~~~~~~~~i~~i~dvLs~~Ec~~li~~~e~~~~~dg~~t~---g-~~~~~vr~n~--~l~~-d~~~~~~l~~~i~~~l~~ 85 (243)
T 3dkq_A 13 ENLYFQGMLIEIPNVFSKQEVSHLREQLDARRWIDGNQTS---G-AMATTRKRNQ--QLDK-DDPVAVALGQQIMDRLLA 85 (243)
T ss_dssp -CCCCBTTBEEECCSSCHHHHHHHHHHHHTSCCEEECCCS---S-BSSCCCEEEE--ECCT-TCHHHHHHHHHHHHHHHT
T ss_pred cccccCCCEEEECCCCCHHHHHHHHHHHhhCCCccCcccC---C-Cccccceeee--EECC-CCHHHHHHHHHHHHHHcc
Confidence 345567899999999999999999999975 455544432 2 2345567664 4442 468999999999987654
Q ss_pred C--------CCCCccceeeecCCCCccccccccccCcccccCCCceeEEEEEeecC--CCCCcccccCCCCCCCCCCCCC
Q 022406 115 P--------KENGEDIQVLRYEHGQKYEPHYDYFSDKVNIVRGGHRLATVLMYLSD--VAKGGETVFPNAEQEPPRRRTP 184 (297)
Q Consensus 115 p--------~~~~E~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd--~~~GGeT~Fp~~~~~~~~~~~~ 184 (297)
. ....|++|++||++|++|++|+|++...... .+.+|.+|+++|||| +++||||+|+...
T Consensus 86 ~~~f~~~~L~~~~e~~~~~rY~~G~~y~~H~D~~~~~~~~-~~~~r~~T~~lYLndp~~~~GGetvf~~~~--------- 155 (243)
T 3dkq_A 86 HPQFVSAALPLQFYPPLFNRYQGGETFGYHIDNAIRSTPD-GMIRTDLSATLFLSEPENYQGGELVIQDTY--------- 155 (243)
T ss_dssp CHHHHHHHCEEEEEEEEEEEECTTCEEEEECBCSEEEETT-EEEECCEEEEEECSCGGGEEECCEEEEETT---------
T ss_pred CcchhhcccccccccceEEEECCCCeeccCCCCCCCCCCC-ccccceEEEEEEeCCCCCCCCceEEEeeCC---------
Confidence 3 1235779999999999999999998653210 023689999999999 6799999999752
Q ss_pred CCCCcchhhhcCCeeEecCcccEEEeeecCCCCCCCCCccccCCcccccceEEEEEEEeccCcc
Q 022406 185 ATNDDLSECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIHVDSFD 248 (297)
Q Consensus 185 ~~~~~~~~C~~~~~~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~~~~~ 248 (297)
+...|+|++|+||+|++ .++|+||||++|+||++++||+..-.+
T Consensus 156 -----------~~~~V~P~~G~~v~F~s---------~~lH~v~pV~~G~R~~~~~Wi~s~vr~ 199 (243)
T 3dkq_A 156 -----------GQQSIKLSAGSLVLYPS---------SSLHQVTPVLSGERTAAFMWLQSMVRD 199 (243)
T ss_dssp -----------EEEEECCCTTCEEEEET---------TSEEEECCEEEECEEEEEEEEEESCCC
T ss_pred -----------CcEEEecCCCEEEEECC---------CCeEcCccccccCEEEEEEehhhccCC
Confidence 25889999999999985 589999999999999999999976554
No 4
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=99.91 E-value=6.5e-24 Score=190.63 Aligned_cols=171 Identities=19% Similarity=0.264 Sum_probs=125.1
Q ss_pred CcEEEEcCCCCHHHHHHHHHHHhc-----ccccceeeeCCCCcccccccccccccccCCCch--H----HHHHHHHHHHH
Q 022406 42 PRAFVYEGFLTDLECDHLINLAKS-----QLKRSAVADNLSGESKLSDVRTSSGTFIPKGKD--A----IIAGIEDKIAT 110 (297)
Q Consensus 42 P~i~~i~nfLs~~Ec~~li~~a~~-----~~~~s~v~~~~~g~~~~~~~R~s~~~~l~~~~~--~----v~~~i~~ri~~ 110 (297)
+.+++++|||+++||+.|++.++. .++++.+... ......++|++...|++..+. + +.+.|.+.+..
T Consensus 26 ~g~~Vid~fLs~ee~~~L~~~~~~~~~~g~~~~a~i~~~--~~~~~~~iR~d~i~wl~~~~~~~~~~~~l~~~i~~l~~~ 103 (247)
T 2hbt_A 26 HGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQ--KSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRH 103 (247)
T ss_dssp TSEEEESSSSCHHHHHHHHHHHHHHHHTTCSCSCCEEEC--CSSSTTCEECCEEEEECSCSTTCHHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCHHHHHHHHHHHHhhhhcCCccccccccc--cccccccccccceeeecccccchhHHHHHHHHHHHHHHH
Confidence 457899999999999999999875 3667766542 223567899999999987432 2 23333333333
Q ss_pred hcC-CCCC---CCccceeeecCC-CCccccccccccCcccccCCCceeEEEEEeecCC----CCCcccccCCCCCCCCCC
Q 022406 111 WTF-LPKE---NGEDIQVLRYEH-GQKYEPHYDYFSDKVNIVRGGHRLATVLMYLSDV----AKGGETVFPNAEQEPPRR 181 (297)
Q Consensus 111 ~~~-~p~~---~~E~~qv~rY~~-G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~----~~GGeT~Fp~~~~~~~~~ 181 (297)
+.. +... ..+.+|+++|.+ |++|++|.|... +.+|.+|+++|||+. +.||+|.|.....
T Consensus 104 ln~~lGl~~i~~~~e~~~~~Y~~~G~~y~~H~D~~~-------~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~----- 171 (247)
T 2hbt_A 104 CNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNPN-------GDGRCVTCIYYLNKDWDAKVSGGILRIFPEGK----- 171 (247)
T ss_dssp TTTTSTTCCEEEECCEEEEEECSSSCCEEEECSSCS-------CCSEEEEEEEECBTTCCHHHHBCCEEECCTTC-----
T ss_pred HhhhcCcccccccceEEEEEecCCCCcccccccCCC-------CCCceEEEEEEeCCCCCCCCCceeEEEecCCC-----
Confidence 222 1111 125699999996 999999999832 357999999999994 5699997544211
Q ss_pred CCCCCCCcchhhhcCCeeEecCcccEEEeeecCCCCCCCCCccccCCcccccceEEEEEEEeccCc
Q 022406 182 RTPATNDDLSECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIHVDSF 247 (297)
Q Consensus 182 ~~~~~~~~~~~C~~~~~~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~~~~ 247 (297)
.....|.|+.|++|+|.+ +..++|+++|+ .|+||+++.|++....
T Consensus 172 -------------~~~~~v~P~~grlv~F~s-------~~~~~H~V~p~-~~~R~sit~W~~~~~~ 216 (247)
T 2hbt_A 172 -------------AQFADIEPKFDRLLFFWS-------DRRNPHEVQPA-YATRYAITVWYFDADE 216 (247)
T ss_dssp -------------SSCEEECCBTTEEEEEEC-------STTCCEEECCB-SSCEEEEEEEEEEHHH
T ss_pred -------------CceEEEEcCCCEEEEEec-------CCCceeeeccC-CCEEEEEEEEEcCCch
Confidence 014789999999999986 23589999995 6899999999998764
No 5
>2k72_A Matrix metalloproteinase-23; toxin, metalloprotease, MMP23, potassium channel, cleavage on PAIR of basic residues, glycoprotein, hydrolase; NMR {Synthetic}
Probab=99.51 E-value=2.1e-15 Score=95.73 Aligned_cols=36 Identities=36% Similarity=0.851 Sum_probs=35.2
Q ss_pred ccccCccccHhHhhcCccccCcccccccccCcchhhhhcCCC
Q 022406 256 DCTDNNASCERWAALGECTKNPEYMVGSAQLPGFCRRSCKVC 297 (297)
Q Consensus 256 ~C~d~~~~C~~wa~~geC~~n~~~m~~~~~~~~~C~~sC~~C 297 (297)
.|.|.+..|+.||+.|||++||.||. ++|++|||+|
T Consensus 2 ~C~D~~~~C~~Wa~~G~C~~n~~~M~------~~C~~SC~~C 37 (37)
T 2k72_A 2 GCLDRIFVCTSWARKGFCDVRQRLMK------RLCPRSCDFC 37 (37)
T ss_dssp CCCCCCSCHHHHHTTTTTTTSHHHHH------HHCHHHHTCC
T ss_pred CCcCcchhhHHHHhCCccCCCchHHH------hHHHHHhccC
Confidence 69999999999999999999999999 9999999998
No 6
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=99.25 E-value=3.3e-11 Score=118.44 Aligned_cols=178 Identities=17% Similarity=0.191 Sum_probs=111.1
Q ss_pred eccCCc-EEEEcCCCCHHHHHHHHHHHhcc--ccccee--ee-CCCCcccccccccccc-cccCCCchHHHH--------
Q 022406 38 ISWKPR-AFVYEGFLTDLECDHLINLAKSQ--LKRSAV--AD-NLSGESKLSDVRTSSG-TFIPKGKDAIIA-------- 102 (297)
Q Consensus 38 ls~~P~-i~~i~nfLs~~Ec~~li~~a~~~--~~~s~v--~~-~~~g~~~~~~~R~s~~-~~l~~~~~~v~~-------- 102 (297)
.+..|+ -++|+|||.++..+.|.+.+... +.+... .. ..+|. ..+-.+ .+=.....+.+.
T Consensus 29 ~~s~PFpH~VIdnfl~d~lle~V~~Efp~~i~f~~KetDlYk~~Qsgd-----Lanl~~l~~e~l~~lp~l~~Lr~~L~S 103 (633)
T 3kt7_A 29 EDSQPYNWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGD-----LANLSGLDWDDLSRLPNLFKLRQILYS 103 (633)
T ss_dssp HTCSSSCCEEESSCBCHHHHHHHHHHHHHHCCCEEEECSSEEEEECCC-----TTCTTSCCTTCCTTCHHHHHHHHHHTS
T ss_pred hcCCCcceEEECCCCCHHHHHHHHHHhhhccCcccccccccceecccc-----ccccccCChhhhccChHHHHHHHHHhc
Confidence 345565 47899999999889988877632 222110 00 00010 000000 000000012222
Q ss_pred -HHHHHHHHhcCC-CCC-CCccceeeecCCCCccccccccccCcccccCCCceeEEEEEeecCC------CCCcccccCC
Q 022406 103 -GIEDKIATWTFL-PKE-NGEDIQVLRYEHGQKYEPHYDYFSDKVNIVRGGHRLATVLMYLSDV------AKGGETVFPN 173 (297)
Q Consensus 103 -~i~~ri~~~~~~-p~~-~~E~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~------~~GGeT~Fp~ 173 (297)
.+.+-|++++|+ ++. ..-.+++.+|.+|.+|.+|.|.+ +.|.+|+++|||+. +.||++.+..
T Consensus 104 ~~Fr~~Ls~iTGi~~Lsg~~~D~~~a~Y~~G~fL~~H~D~~---------~~RrvS~VLYLN~pd~~W~~e~GGeL~Lyd 174 (633)
T 3kt7_A 104 KQYRDFFGYVTKAGKLSGSKTDMSINTYTKGCHLLTHDDVI---------GSRRISFILYLPDPDRKWKSHYGGGLRLFP 174 (633)
T ss_dssp HHHHHHHHHHHTCCCCCSSCCCEEEEEECTTCEEEEECCCC---------TTEEEEEEEECSCTTSCCCGGGBCCEEECC
T ss_pred HHHHHHHHHHhCCcccCCCceeEEEEEeCCCCeeeecCCCC---------CCeEEEEEEEcCCCCCCCCccCCceEEEec
Confidence 234455667887 332 23458999999999999999963 24999999999983 3699998765
Q ss_pred CCCCCCCCCCCCCCCcchhhhcCCeeEecCcccEEEeeecCCCCCCCCCccccCCccc-ccceEEEEEEEeccCc
Q 022406 174 AEQEPPRRRTPATNDDLSECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVI-EGEKWSATKWIHVDSF 247 (297)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~C~~~~~~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~-~G~K~i~~~Wi~~~~~ 247 (297)
.+..... .. .....|.|.-|++|+|.+. ...++|++.||. ...|++++.|+|....
T Consensus 175 ~d~~~~P---------~~---d~~~~I~P~fNrLV~F~vs------p~~S~H~V~eV~~~~~RlSItGWF~~p~~ 231 (633)
T 3kt7_A 175 SILPNVP---------HS---DPSAKLVPQFNQIAFFKVL------PGFSFHDXEEVKVDKHRLSIQGWYHIPQV 231 (633)
T ss_dssp EEETTEE---------CS---SCSEEECCCTTEEEEEECC------TTTCCEEECCBCSSCCEEEEEEEEECCCT
T ss_pred CCCcCCC---------CC---CceEEEecCCCeEEEEEcC------CCCCcCCCCccCCCCCEEEEEEEeccCCC
Confidence 4311000 00 0157899999999999751 026999999998 4589999999998753
No 7
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=98.58 E-value=1e-07 Score=83.39 Aligned_cols=102 Identities=15% Similarity=0.043 Sum_probs=70.3
Q ss_pred ceeeecCCCCccccccccccCcccccCCCceeEEEEEeecCCCCCcccccCCCCCCCCCC-CCCCCCCcchhhhcCCeeE
Q 022406 122 IQVLRYEHGQKYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEQEPPRR-RTPATNDDLSECAKKGIAV 200 (297)
Q Consensus 122 ~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~~~~~~~~~-~~~~~~~~~~~C~~~~~~V 200 (297)
.-+..|.+|++|++|.+. ++.+|.++|||.++.||++.|.+......-- .....+.... ......|
T Consensus 105 ~W~~~~~~G~~~~~H~H~-----------~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~--~~~~~~i 171 (216)
T 2rg4_A 105 IWINILPEGGVHGSHIHP-----------HSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREE--LRTFRSV 171 (216)
T ss_dssp EEEEEECTTCCEEEECCT-----------TCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGG--GCSEEEE
T ss_pred EEEEEcCCCCcccCccCC-----------CCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCccc--CCCeeEe
Confidence 457789999999999883 4789999999999899999997532110000 0000000000 0112489
Q ss_pred ecCcccEEEeeecCCCCCCCCCccccCCcccc-cceEEEEEEEecc
Q 022406 201 KPRRGDALLFFSLHTNAIPDPVSLHSGCPVIE-GEKWSATKWIHVD 245 (297)
Q Consensus 201 ~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~-G~K~i~~~Wi~~~ 245 (297)
+|+.|++|||+| ...|++.|... ++|+++.--+...
T Consensus 172 ~P~~G~lvlFpS---------~l~H~V~p~~~~~~RiSIsFN~~~~ 208 (216)
T 2rg4_A 172 APKVGDVLLWES---------WLRHEVPMNMAEEDRISVSFNYAWG 208 (216)
T ss_dssp CCCTTEEEEEET---------TSCEEECCCCSSSCEEEEEEEEEC-
T ss_pred cCCCCeEEEECC---------CCEEeccCCCCCCCEEEEEEEeecC
Confidence 999999999987 69999999875 5898887666433
No 8
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=97.91 E-value=4.3e-05 Score=68.65 Aligned_cols=194 Identities=13% Similarity=0.028 Sum_probs=98.4
Q ss_pred eEEeccCCcEEEEcCCCCHHHHHHHHHHHhcccccceeeeCCCCccccccccc-c--cccccCC--CchHHH--HHHHHH
Q 022406 35 VKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRT-S--SGTFIPK--GKDAII--AGIEDK 107 (297)
Q Consensus 35 ve~ls~~P~i~~i~nfLs~~Ec~~li~~a~~~~~~s~v~~~~~g~~~~~~~R~-s--~~~~l~~--~~~~v~--~~i~~r 107 (297)
++.+..+- .+++++||+++|++.|.+..+..+.......... .......+. . ...++.. .-..++ .+|.+.
T Consensus 25 ~~~f~~dG-yvvl~~~l~~e~v~~l~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~l~~~ 102 (288)
T 2rdq_A 25 DSFYEEHG-YLFLRNVLDRDLVKTVAEQMREGLVALGAADPHA-TLEELTIDSFESVDEVAMHDYVKYDAFWNNPSTIKV 102 (288)
T ss_dssp HHHHHHHS-EEEECSCSCHHHHHHHHHHHHHHHHHHSCCCTTC-CTTTCCCSCSTTSCHHHHHHHCCHHHHHTSHHHHHH
T ss_pred HHHHHhCC-EEEEeCCCCHHHHHHHHHHHHHHHHhcCCCCCCC-CcchhhhhhhcccccccccchHHHHHHHcCHHHHHH
Confidence 33344444 5689999999999999998876433211111100 000000000 0 0000000 000111 233444
Q ss_pred HHHhcCCCCCCCccceeeecCC----------CCccccccccccCcccccCCCceeEEEEEeecCCC-CCccccc-CCCC
Q 022406 108 IATWTFLPKENGEDIQVLRYEH----------GQKYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVA-KGGETVF-PNAE 175 (297)
Q Consensus 108 i~~~~~~p~~~~E~~qv~rY~~----------G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~-~GGeT~F-p~~~ 175 (297)
++.+.|-+.... ..++.+..+ |....||.|..... ...+.+|+.|+|.|+. +.|.|.| |.+.
T Consensus 103 ~~~llG~~~~l~-~~~~~~~~p~~~~~k~p~~g~~~~wHqD~~~~~-----~~~~~v~~wiaL~d~~~enG~l~vvPGSH 176 (288)
T 2rdq_A 103 FEQVFGEPVFVF-LSTTIRYYPSQAGSEEPSFHYLTPFHQDGFYIG-----PNQDFRTFWIPLIRTTRESGGVALADGSH 176 (288)
T ss_dssp HHHHHSSCEEEE-EEEEEEEECCCTTCSSCCCTTSCCSBCHHHHSC-----SCCCCEEEEEESSCCCTTTCEEEEETTTT
T ss_pred HHHHhCCCceee-eeeeeeecCCcccccccCcCCCcCccccccccC-----CCCCeEEEEEECCCCCccCCcEEEEeCCc
Confidence 455555432111 122333222 45678999986431 2346899999999985 5666655 5542
Q ss_pred CCCCCCCC----CCCC-----Ccc-hhh--hcCCeeEecCcccEEEeeecCCCCCCCCCccccCCccccc----ceEEEE
Q 022406 176 QEPPRRRT----PATN-----DDL-SEC--AKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEG----EKWSAT 239 (297)
Q Consensus 176 ~~~~~~~~----~~~~-----~~~-~~C--~~~~~~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~G----~K~i~~ 239 (297)
........ .... ... .+- ....+.+.-++|++|||. ..++|++.|.... .+|++.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~aGdv~lf~---------~~~~H~s~~N~s~~~R~~R~s~~ 247 (288)
T 2rdq_A 177 RRGKRDHVLNESFRRFGHPVRGIPPTEVSEDEHLLHSPMEPGDILLFH---------AHMCHKSIPNLSKDPRLMRMSMD 247 (288)
T ss_dssp SSCCCCCEEEEEEEETTEEEEECCGGGSCTTSCEECCCCCTTCEEEEE---------TTCCEEEECCCCCTTCCCEEEEE
T ss_pred cccccccccchhhhccCcccccCCCccccccCceeecccCCCCEEEEe---------CCceecCCCCCCCCccceEEEEE
Confidence 21110000 0000 000 000 011356777999999996 4899999998865 368888
Q ss_pred EEEecc
Q 022406 240 KWIHVD 245 (297)
Q Consensus 240 ~Wi~~~ 245 (297)
.|+...
T Consensus 248 ~~~~~~ 253 (288)
T 2rdq_A 248 TRVQPA 253 (288)
T ss_dssp EEEEET
T ss_pred EEEecC
Confidence 888554
No 9
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=97.85 E-value=0.00028 Score=64.10 Aligned_cols=186 Identities=10% Similarity=0.052 Sum_probs=94.5
Q ss_pred cEEEEcCCCCHHHHHHHHHHHhcccccc--eeeeCCCCcccc-cccccccccccCCCchHHH------HHHHHHHHHhcC
Q 022406 43 RAFVYEGFLTDLECDHLINLAKSQLKRS--AVADNLSGESKL-SDVRTSSGTFIPKGKDAII------AGIEDKIATWTF 113 (297)
Q Consensus 43 ~i~~i~nfLs~~Ec~~li~~a~~~~~~s--~v~~~~~g~~~~-~~~R~s~~~~l~~~~~~v~------~~i~~ri~~~~~ 113 (297)
..+++++||+++|++.|.+.....+... .+... +.... ...|.....+.. ++.+ .+|.+.++++.|
T Consensus 22 Gyvvl~~~l~~e~v~~l~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~~~~~~p~l~~~~~~llG 96 (313)
T 2fct_A 22 GFIGPFDAYSPEEMKETWKRTRLRLLDRSAAAYQD--LDAISGGTNIANYDRHLD---DDFLASHICRPEICDRVESILG 96 (313)
T ss_dssp SEEEEEESSCHHHHHHHHHHHHHHHTCCTTCSCCC--CCC----CGGGGBCGGGT---CHHHHHHTTCHHHHHHHHHHHC
T ss_pred CEEECCCCCCHHHHHHHHHHHHHHHhccccccccc--ccccCCccchhccccccc---cHHHHHHHcChHHHHHHHHHcC
Confidence 4568999999999999997776533211 11110 00000 001211111111 1222 334555566666
Q ss_pred CCCCCCccceeeecCCCCccccccccccCcccc------cCCCc--eeEEEEEeecCCC-CCccccc-CCCCCCCCCC--
Q 022406 114 LPKENGEDIQVLRYEHGQKYEPHYDYFSDKVNI------VRGGH--RLATVLMYLSDVA-KGGETVF-PNAEQEPPRR-- 181 (297)
Q Consensus 114 ~p~~~~E~~qv~rY~~G~~y~~H~D~~~~~~~~------~~~~~--R~~T~liYLnd~~-~GGeT~F-p~~~~~~~~~-- 181 (297)
-+.......-+.+...++...||.|...-.... ..... +.+|+.|+|.|+. +.|.|.| |.+.......
T Consensus 97 ~~~~~~~~~~~~k~Pg~~~~~wHqD~~~~~~~g~p~~~~p~~~~~~~~l~~wiaL~D~~~enG~l~~vPGSH~~~~~~~~ 176 (313)
T 2fct_A 97 PNVLCWRTEFFPKYPGDEGTDWHQADTFANASGKPQIIWPENEEFGGTITVWTAFTDANIANGCLQFIPGTQNSMNYDET 176 (313)
T ss_dssp SCEEEEEEEEEEECTTCCEECCBCCSSSCTTTSSCSEECCTTSCCCSCEEEEEESSCBCTTBTCEEEETTCTTSCCBCTT
T ss_pred CCeEeeeeeEEEeCCCCCCCCccccccccccCCCccccccccccccCeEEEEEEeccCCccCCCEEEEcCCCcCCccccc
Confidence 322111112233444334468999985421100 00011 6799999999985 5666665 5442211000
Q ss_pred --CCCC--------C-----------------CCcchhhhcCCeeEecCcccEEEeeecCCCCCCCCCccccCCccc--c
Q 022406 182 --RTPA--------T-----------------NDDLSECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVI--E 232 (297)
Q Consensus 182 --~~~~--------~-----------------~~~~~~C~~~~~~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~--~ 232 (297)
.... + +..+..-....+.+.-++|++|||. ..++|++.|.. .
T Consensus 177 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~aGd~v~f~---------~~l~H~s~~N~~ss 247 (313)
T 2fct_A 177 KRMTYEPDANNSVVKDGVRRGFFGYDYRQLQIDENWKPDEASAVPMQMKAGQFIIFW---------STLMHASYPHSGES 247 (313)
T ss_dssp SCCCCCTTTCSSCEETTEEEEBTTBCGGGGBSSTTCCCCGGGCEEECBCTTEEEEEE---------TTSEEEECCBCSSS
T ss_pred cccccChhhhhhhhhccccccccccchhhhccccccCCccCceeEeeeCCceEEEEe---------CCceeeCCCCCCCC
Confidence 0000 0 0000000123578899999999996 48999999998 4
Q ss_pred c-ceEEEEEEE
Q 022406 233 G-EKWSATKWI 242 (297)
Q Consensus 233 G-~K~i~~~Wi 242 (297)
. .|+++..-+
T Consensus 248 ~~~R~a~~~~y 258 (313)
T 2fct_A 248 QEMRMGFASRY 258 (313)
T ss_dssp SSCEEEEEEEE
T ss_pred CCceEEEEEEE
Confidence 3 677766544
No 10
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=97.73 E-value=0.00018 Score=65.30 Aligned_cols=199 Identities=12% Similarity=0.153 Sum_probs=98.9
Q ss_pred cCCceeEEeccCCcEEEEcCCCCHHHHHHHHHHHhcccccc-----ee-eeCC-CCccc-cccccc--ccccccCCCchH
Q 022406 30 INPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRS-----AV-ADNL-SGESK-LSDVRT--SSGTFIPKGKDA 99 (297)
Q Consensus 30 ~~p~kve~ls~~P~i~~i~nfLs~~Ec~~li~~a~~~~~~s-----~v-~~~~-~g~~~-~~~~R~--s~~~~l~~~~~~ 99 (297)
|.+..++.+..+- .+++++||+++|++.|.+..+..+... .. .... .+... ....+. ....|. .++
T Consensus 23 Lt~e~~~~f~~dG-yvvl~~~l~~e~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 98 (308)
T 2a1x_A 23 LTLEQRKFYEENG-FLVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKSEYAPSEKMITKVQDFQ---EDK 98 (308)
T ss_dssp CCSTHHHHHHHHS-EEEETTCSCHHHHHHHHHHHHHHHTTSCCCSSCEEECCEEECCCE-----EECCEEECCT---TSH
T ss_pred CCHHHHHHHHhCC-EEEccCCCCHHHHHHHHHHHHHHHhccccCCCccccccccccccccCchHHHHhhhhhhh---hCH
Confidence 4444444454444 568999999999999999887633211 00 0000 00000 000000 001121 233
Q ss_pred HH------HHHHHHHHHhcCCCCCCCccceeeecCC-CCc---cccccccccCcccccCCCceeEEEEEeecCCC-CCcc
Q 022406 100 II------AGIEDKIATWTFLPKENGEDIQVLRYEH-GQK---YEPHYDYFSDKVNIVRGGHRLATVLMYLSDVA-KGGE 168 (297)
Q Consensus 100 v~------~~i~~ri~~~~~~p~~~~E~~qv~rY~~-G~~---y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~-~GGe 168 (297)
.+ .+|.+.++.+.|-+.......-+.+... |+. ..||.|...-.. ....+.+|+.++|.|+. +.|.
T Consensus 99 ~~~~l~~~p~l~~~~~~llG~~~~~~~~~~~~k~P~~g~~~~~~~wHqD~~~~~~---~p~~~~v~~wiaL~D~~~enG~ 175 (308)
T 2a1x_A 99 ELFRYCTLPEILKYVECFTGPNIMAMHTMLINKPPDSGKKTSRHPLHQDLHYFPF---RPSDLIVCAWTAMEHISRNNGC 175 (308)
T ss_dssp HHHHHHHCHHHHHHHHHHHCSSEEEEEEEEEEECCC--------CCBCGGGGCCE---ECGGGEEEEEEESSCBCTTBTC
T ss_pred HHHHHHhCHHHHHHHHHhcCCCcceecceEEEcCCCCCCCccCCCCccCCccccC---CCCCCeEEEEEEeeccCCCCCc
Confidence 33 2344555566663321111122334332 332 479999753211 11246899999999985 5676
Q ss_pred ccc-CCCCCCCCCCCCCCCCC--------cchhh--hcCCeeEecCcccEEEeeecCCCCCCCCCccccCCcccc-cceE
Q 022406 169 TVF-PNAEQEPPRRRTPATND--------DLSEC--AKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIE-GEKW 236 (297)
Q Consensus 169 T~F-p~~~~~~~~~~~~~~~~--------~~~~C--~~~~~~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~-G~K~ 236 (297)
|.| |.+............+. ...+. ....+.+.-++|++|||. ..++|++.|... ..|+
T Consensus 176 l~~vPGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~aGd~vlf~---------~~~~H~s~~N~s~~~R~ 246 (308)
T 2a1x_A 176 LVVLPGTHKGSLKPHDYPKWEGGVNKMFHGIQDYEENKARVHLVMEKGDTVFFH---------PLLIHGSGQNKTQGFRK 246 (308)
T ss_dssp EEECTTGGGSCCCCCCC-----------CCCCC-CCCSCCEEECBCTTCEEEEC---------TTCCEEECCBCSSSCEE
T ss_pred EEEEcCCCCCccccccccccccCccccccCCccccccCCeEEccCCCccEEEEC---------CCccccCCCCCCCCceE
Confidence 765 44321100000000000 00011 123577888999999995 489999999875 4788
Q ss_pred EEEEEEec
Q 022406 237 SATKWIHV 244 (297)
Q Consensus 237 i~~~Wi~~ 244 (297)
+++..+..
T Consensus 247 ~~~~~y~~ 254 (308)
T 2a1x_A 247 AISCHFAS 254 (308)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEC
Confidence 87765543
No 11
>3emr_A ECTD; double stranded beta helix, oxidoreductase; HET: MSE; 1.85A {Virgibacillus salexigens}
Probab=97.24 E-value=0.00035 Score=63.98 Aligned_cols=196 Identities=14% Similarity=0.049 Sum_probs=95.5
Q ss_pred eEEeccCCcEEEEcCCCCHHHHHHHHHHHhcccccceeeeCCCC--cccccccccccccccCCCchHHHH------HHHH
Q 022406 35 VKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSG--ESKLSDVRTSSGTFIPKGKDAIIA------GIED 106 (297)
Q Consensus 35 ve~ls~~P~i~~i~nfLs~~Ec~~li~~a~~~~~~s~v~~~~~g--~~~~~~~R~s~~~~l~~~~~~v~~------~i~~ 106 (297)
++.+..+- .+++++||+++|++.|.+..+..+......+.... +.....+|.-..++. .++++. +|.+
T Consensus 40 i~~f~~dG-yvvi~~~ls~eev~~lr~~i~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~f~~l~~~p~l~~ 115 (310)
T 3emr_A 40 LDSYEKNG-FLQIKNFFSEDEVIDMQKAIFELQDSIKDVASDKVIREPESNDIRSIFHVHQ---DDNYFQDVANDKRILD 115 (310)
T ss_dssp HHHHHHHS-EEEETTCSCHHHHHHHHHHHHHHHHHTTTCCCTTEEECTTTCCEEEEECHHH---HCHHHHHHHTCHHHHH
T ss_pred HHHHHhCC-EEEccCCCCHHHHHHHHHHHHHHHhcccccCCccceecCCCcceeEEeehhh---ccHHHHHHHhChHHHH
Confidence 33343344 56899999999999999988764322111000000 000011222111111 123332 2334
Q ss_pred HHHHhcCCCCCCCccceeeecC-CCCccccccccccCcccccCCCceeEEEEEeecCCC-CCccccc-CCCCCCCCCC-C
Q 022406 107 KIATWTFLPKENGEDIQVLRYE-HGQKYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVA-KGGETVF-PNAEQEPPRR-R 182 (297)
Q Consensus 107 ri~~~~~~p~~~~E~~qv~rY~-~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~-~GGeT~F-p~~~~~~~~~-~ 182 (297)
.++.+.|-.....-..-+.+-. .|....||.|...-.........+.+|+.|+|.|+. +.|.|.| |.+....... +
T Consensus 116 i~~~llG~~~~l~~s~~~~k~p~~g~~~~wHqD~~~~~~~~g~P~~~~v~~wiaL~D~t~enG~l~viPGSH~~~~~~~g 195 (310)
T 3emr_A 116 IVRHLLGSDVYVHQSRINYKPGFKGKEFDWHSDFETWHVEDGMPRMRAISVSIALSDNYSFNGPLMLIPGSHNYFVSCVG 195 (310)
T ss_dssp HHHHHHTSCEEEEEEEEECCCTTCCCCEEEECHHHHHHHHHCCCSSCEEEEEEESSCBCSSSCCCEECTTGGGEEEECCC
T ss_pred HHHHHcCCceEEEeeEEEEcCCCCCCCCCcCCCCccccccCCCcccceEEEEEEecCCCCcCCCEEEEeCCCCCcccccc
Confidence 4445555322111111112222 356788999974311000011257899999999984 5666655 4432110000 0
Q ss_pred CCCCC-----------C-----cchh-hhc-C-CeeEecCcccEEEeeecCCCCCCCCCccccCCccccc-ceEEEEEEE
Q 022406 183 TPATN-----------D-----DLSE-CAK-K-GIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEG-EKWSATKWI 242 (297)
Q Consensus 183 ~~~~~-----------~-----~~~~-C~~-~-~~~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~G-~K~i~~~Wi 242 (297)
..+.+ + ...+ ..+ . -+.+.-++|++|||. ..++|++.+-... .|+++..-+
T Consensus 196 ~~p~~~~~~~l~~~~~g~p~~~~~~~~~~~~~~~v~~~~~aGdvl~f~---------~~~~H~s~~N~S~~~R~~l~~~y 266 (310)
T 3emr_A 196 ETPDNNYKESLKKQKLGVPDEESLRELTRIGGGISVPTGKAGSVTLFE---------SNTMHGSTSNITPYPRNNLFMVY 266 (310)
T ss_dssp -----------------CCCHHHHHHHHHHHTSCBCCCBSTTCEEEEE---------TTCCEEECCCCSSCCCCEEEEEE
T ss_pred cccccccccccccccccCCCHHHHHHHHhccCceEEeeeCCceEEEEe---------CCceecCCCCCCCCCeEEEEEEE
Confidence 00000 0 0000 001 1 466777899999996 4899999998754 677665544
Q ss_pred e
Q 022406 243 H 243 (297)
Q Consensus 243 ~ 243 (297)
.
T Consensus 267 ~ 267 (310)
T 3emr_A 267 N 267 (310)
T ss_dssp E
T ss_pred e
Confidence 3
No 12
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=97.20 E-value=0.0017 Score=58.11 Aligned_cols=99 Identities=16% Similarity=0.164 Sum_probs=59.9
Q ss_pred CCccccccccccCcccccCCCceeEEEEEeecCCC-CCccccc-CCCCCCCCCC-------CCCCC------CCcchhhh
Q 022406 130 GQKYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVA-KGGETVF-PNAEQEPPRR-------RTPAT------NDDLSECA 194 (297)
Q Consensus 130 G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~-~GGeT~F-p~~~~~~~~~-------~~~~~------~~~~~~C~ 194 (297)
|+...||.|...-.. ....+.+|+.|+|.|+. ++|.|.| |.+....... +.... ...+..
T Consensus 150 ~~~~~wHqD~~~~~~---~p~~~~~~~wi~L~d~~~~nG~l~~vPGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 224 (291)
T 2opw_A 150 GGEVSPHQDASFLYT---EPLGRVLGVWIAVEDATLENGCLWFIPGSHTSGVSRRMVRAPVGSAPGTSFLGSEPARDN-- 224 (291)
T ss_dssp BCCEEEECGGGTSCE---ESSSCEEEEEEESSCBCTTTTCEEEETTCSSSCCSEEEEECC----CCEEEEECCCCCCG--
T ss_pred CCCcCCeeCCccccc---CCCCceEEEEEEcccCCCCCCCEEEECCccCCCcccccccCCCCCCCcceeeccccCCCc--
Confidence 455789999864211 11227899999999985 5667765 5542211000 00000 001111
Q ss_pred cCCeeEecCcccEEEeeecCCCCCCCCCccccCCccccc-ceEEEEEEE
Q 022406 195 KKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEG-EKWSATKWI 242 (297)
Q Consensus 195 ~~~~~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~G-~K~i~~~Wi 242 (297)
...+.+.-++|++|||. ..++|++.|.... .|++++.-+
T Consensus 225 ~~~v~~~~~aGd~~~f~---------~~~~H~s~~N~s~~~R~~~~~~~ 264 (291)
T 2opw_A 225 SLFVPTPVQRGALVLIH---------GEVVHKSKQNLSDRSRQAYTFHL 264 (291)
T ss_dssp GGCEEECBCTTCEEEEE---------TTCEEEECCBCSSSCCCEEEEEE
T ss_pred CCeeecccCCCcEEEEc---------CCceecCCCCCCCCceEEEEEEE
Confidence 13578889999999996 4799999998864 677665544
No 13
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=97.15 E-value=0.0027 Score=55.88 Aligned_cols=178 Identities=16% Similarity=0.144 Sum_probs=96.1
Q ss_pred eeEEeccCCc----EEEEcCCCCHHHHHHHHHHHhc--ccccceeeeCCCCccccc----------ccccccccccCC-C
Q 022406 34 KVKQISWKPR----AFVYEGFLTDLECDHLINLAKS--QLKRSAVADNLSGESKLS----------DVRTSSGTFIPK-G 96 (297)
Q Consensus 34 kve~ls~~P~----i~~i~nfLs~~Ec~~li~~a~~--~~~~s~v~~~~~g~~~~~----------~~R~s~~~~l~~-~ 96 (297)
...+++..|. +.++++||+++|.+.|++.... .+....... .|..+.. .++-+....-.. .
T Consensus 28 g~~~~~~~p~~i~gl~~~~~fl~~~e~~~Ll~~l~~~~~w~~~~~~~--~g~~~~~~R~~~~~g~~~Y~Ys~~~~~~~p~ 105 (238)
T 2iuw_A 28 GVYEISLSPTGVSRVCLYPGFVDVKEADWILEQLCQDVPWKQRTGIR--EDITYQQPRLTAWYGELPYTYSRITMEPNPH 105 (238)
T ss_dssp EEEEEECCSSSCEEEEEETTSSCHHHHHHHHHHHHHHSCCBCCEEES--SSCEEECSSEEEEEECCCTTSCHHHHCCBSS
T ss_pred cceeeecCCCCCCcEEEECCCCCHHHHHHHHHHHHHhCCCccCceec--CCcccccCCeeEEcCCCccccCCcccCCCCC
Confidence 3444544444 8999999999999999988643 243322210 1111110 111111100010 2
Q ss_pred chHHHHHHHHHHHHhcCCCCCCCccceeeecCCCC-ccccccccccCcccccCCCceeEEEEEeecCCCCCcccccCCCC
Q 022406 97 KDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQ-KYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAE 175 (297)
Q Consensus 97 ~~~v~~~i~~ri~~~~~~p~~~~E~~qv~rY~~G~-~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~~~ 175 (297)
..+.+..|.++++++.+.+ .+..-|..|.+|+ .-.+|.|....- ..+..++|+-+ |+..+|-...
T Consensus 106 wp~~l~~l~~~~~~~~g~~---~n~~LvN~Y~~G~d~i~~H~D~~~~~----~~~~~IaslSL-------G~~~~f~f~~ 171 (238)
T 2iuw_A 106 WHPVLRTLKNRIEENTGHT---FNSLLCNLYRNEKDSVDWHSDDEPSL----GRCPIIASLSF-------GATRTFEMRK 171 (238)
T ss_dssp CCHHHHHHHHHHHHHHSCC---CCEEEEEEECSTTCCEEEECCCCGGG----CSSCCEEEEEE-------ESCEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhCCC---CCEEEEEEECCCCCceeCCcCChhhc----CCCCcEEEEEC-------CCCEEEEEec
Confidence 3567778888888876543 2457788999997 999999984321 01245555553 3343432210
Q ss_pred CCCCCCCCCCCCCcchhhhcCCeeEecCcccEEEeeecCCCCCCCCCccccCCccc--ccceEEEE
Q 022406 176 QEPPRRRTPATNDDLSECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVI--EGEKWSAT 239 (297)
Q Consensus 176 ~~~~~~~~~~~~~~~~~C~~~~~~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~--~G~K~i~~ 239 (297)
.... ...+ .......+.|.-..|++|++.- .......|++.+.. .|.|+.+|
T Consensus 172 ~~~~-----~~~~--~~~~~~~~~i~L~~gsllvM~G-----~~r~~w~H~I~~~~~~~~~RIsLT 225 (238)
T 2iuw_A 172 KPPP-----EENG--DYTYVERVKIPLDHGTLLIMEG-----ATQADWQHRVPKEYHSREPRVNLT 225 (238)
T ss_dssp CCC---------------CCCEEEEEECTTCEEEEEE-----THHHHEEEEECCCSSCCCCEEEEE
T ss_pred cCCc-----cccC--cccCCceEEEEcCCCCEEEECh-----hhhCccEecCCCcCCCCCCEEEEE
Confidence 0000 0000 0000124789999999999963 11223569988763 56666655
No 14
>3gja_A CYTC3; halogenase, beta barrel, biosynthetic protein; 2.20A {Streptomyces} PDB: 3gjb_A*
Probab=96.82 E-value=0.0096 Score=54.48 Aligned_cols=191 Identities=12% Similarity=0.086 Sum_probs=94.9
Q ss_pred eEEeccCCcEEEEcCCCCHHHHHHHHHHHhccccc--ceeeeCCCCcccccccccccccccCCCchHHHH------HHHH
Q 022406 35 VKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKR--SAVADNLSGESKLSDVRTSSGTFIPKGKDAIIA------GIED 106 (297)
Q Consensus 35 ve~ls~~P~i~~i~nfLs~~Ec~~li~~a~~~~~~--s~v~~~~~g~~~~~~~R~s~~~~l~~~~~~v~~------~i~~ 106 (297)
++.+..+- .++++++|+++|++.|.+..+..+.. ..+.....|. ..|.....+. .++++. +|.+
T Consensus 17 ~~~f~~~G-yv~i~~~l~~~~v~~l~~~i~~~l~~~~~~~~~~~~g~----~~~~~~~~~~---~~~~f~~l~~~p~l~~ 88 (319)
T 3gja_A 17 VARFERDG-YIGPVKIFEPEEMTRRWNIIRRQLLDRSLAIYPDSNGK----ANISNYDRHL---DIDLLAEHIMRPEIVD 88 (319)
T ss_dssp HHHHHHHS-EEEEEESSCHHHHHHHHHHHHHHHHCCTTCSSCSCSSH----HHHTTTTGGG---TCHHHHHHHHCHHHHH
T ss_pred HHHHHHCC-EEECcCCCCHHHHHHHHHHHHHHhhcCccccccCCCcc----chhhhhhhcc---cCHHHHHHHcChHHHH
Confidence 34444445 56889999999999999888764321 1111110111 1232222221 123332 3444
Q ss_pred HHHHhcCCCCCCCccceeeecCCCCccccccccccCcccc------cCCC--c---eeEEEEEeecCCC-CCccccc-CC
Q 022406 107 KIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYFSDKVNI------VRGG--H---RLATVLMYLSDVA-KGGETVF-PN 173 (297)
Q Consensus 107 ri~~~~~~p~~~~E~~qv~rY~~G~~y~~H~D~~~~~~~~------~~~~--~---R~~T~liYLnd~~-~GGeT~F-p~ 173 (297)
.++.+.|-.....-..-+.+...++...||.|...-.... .... . +.+|+.++|.|+. +-|.|.| |.
T Consensus 89 ~~~~llG~~~~~~~s~~~~k~Pg~~~~~wHqD~~y~~~~g~p~~~~P~~~~~p~~~~~v~~wiaL~d~t~enG~l~vvPG 168 (319)
T 3gja_A 89 RVGSLIGRNLLCWRSEFFPKYQGDEGTDWHQAATFAHATGKPQIIWPSDEGRPAFIGTITVWTAFTHSTEQNGCLQLMPG 168 (319)
T ss_dssp HHHHHHCSSEEEEEEEEEEECTTCCCEEEEEECCBCTTTCCBSEECCCCSSSCEECCCEEEEEESSCBCTTTTCEEECSC
T ss_pred HHHHHcCCceEEeeeeEeecCCCCCCCCcccCCcccccCCCccccCccccccccccceEEEEEEeccCCCcCcCEEEEeC
Confidence 5555666322111111233444333478999975321100 0000 1 3599999999984 5566655 54
Q ss_pred CCCCCCCC--------CC---------------------CCCCCcchhhhcCCeeEecCcccEEEeeecCCCCCCCCCcc
Q 022406 174 AEQEPPRR--------RT---------------------PATNDDLSECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSL 224 (297)
Q Consensus 174 ~~~~~~~~--------~~---------------------~~~~~~~~~C~~~~~~V~P~~G~allF~n~~~~g~~D~~~l 224 (297)
+....... .. +..+..|..-....+.+.-++|++|||.. .++
T Consensus 169 SH~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~~~d~~~l~~~~~~~~~~~~~v~~~~~aGd~v~f~~---------~~~ 239 (319)
T 3gja_A 169 THTSMNYDESKGMDYDADAINQREKDGIKRGFFGYDYRSLQKDPDWKPDESQAYPMVLKPGEAVIFWS---------NTM 239 (319)
T ss_dssp C---CEECCC------------------------------------------CCBCCBCTTEEEEEET---------TSC
T ss_pred CccCcccCcccccccCchhhhhhccccccccccccchhhhccccccccccCceeEeeECCCeEEEEcC---------Ccc
Confidence 32111000 00 00000010001234677788999999964 899
Q ss_pred ccCCccc--cc-ceEEEEEEE
Q 022406 225 HSGCPVI--EG-EKWSATKWI 242 (297)
Q Consensus 225 H~g~PV~--~G-~K~i~~~Wi 242 (297)
|++.|-. +. .|+++..-+
T Consensus 240 H~s~~N~~ts~~~R~a~~~~y 260 (319)
T 3gja_A 240 HASLPHTGSKTDYRMGFAARY 260 (319)
T ss_dssp EEECCCCSCTTCCEEEEEEEE
T ss_pred ccCCCCCCCCCCcEEEEEEEE
Confidence 9999998 54 677665433
No 15
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=96.81 E-value=0.0077 Score=51.72 Aligned_cols=175 Identities=16% Similarity=0.110 Sum_probs=96.4
Q ss_pred EEeccCCcEEEEcCCCCHHHHHHHHHHHhc--cc---ccceeeeCCCCcccc------------cccccccccccCCCch
Q 022406 36 KQISWKPRAFVYEGFLTDLECDHLINLAKS--QL---KRSAVADNLSGESKL------------SDVRTSSGTFIPKGKD 98 (297)
Q Consensus 36 e~ls~~P~i~~i~nfLs~~Ec~~li~~a~~--~~---~~s~v~~~~~g~~~~------------~~~R~s~~~~l~~~~~ 98 (297)
+.+-.+-..+.+++||+++|.++|.+.... .+ +...+.- .|+.+. ..++-|..........
T Consensus 4 ~~~~~~~~~~~~~~~l~~~~a~~l~~~l~~~~~w~~~~~~~~~~--~gk~~~~pR~~~wyg~~~~~Y~Ysg~~~~~~pwp 81 (204)
T 3s57_A 4 RHIRAEGLDSSYTVLFGKAEADEIFQELEKEVEYFTGALARVQV--FGKWHSVPRKQATYGDAGLTYTFSGLTLSPKPWI 81 (204)
T ss_dssp EEEEETTEEEEEEECSCHHHHHHHHHHHHHHCCCCCGGGGEEEE--TTEEEECSSEEEEEECTTCCEEETTEEECCEECC
T ss_pred ceeeeCCceEEecCcCCHHHHHHHHHHHHHhCCCCCcccceEEE--CCeEeccCcEEEEECCCCCCcccCCCcccCCCCC
Confidence 444555667889999999999999987643 35 3222221 122111 1223222222222236
Q ss_pred HHHHHHHHHHHHhcCCCCCCCccceeeecCCCC-ccccccccccCcccccCCCceeEEEEEeecCCCCCcccccCCCCCC
Q 022406 99 AIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQ-KYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEQE 177 (297)
Q Consensus 99 ~v~~~i~~ri~~~~~~p~~~~E~~qv~rY~~G~-~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~~~~~ 177 (297)
+.+..|.++++++++.+. +..-+..|.+|+ .-.+|.|....- ..+.-++|+-+ |+...|-.....
T Consensus 82 ~~L~~l~~~~~~~~g~~~---n~~LvN~Y~~G~d~i~~H~D~~~~~----~~~~~IasvSL-------G~~~~f~~~~~~ 147 (204)
T 3s57_A 82 PVLERIRDHVSGVTGQTF---NFVLINRYKDGSDHICEHRDDEREL----APGSPIASVSF-------GASRDFVFRHKD 147 (204)
T ss_dssp HHHHHHHHHHHHHHCCCC---SEEEEEEESSTTCCEEEECCCCTTB----CTTCCEEEEEE-------ESCEEEEEEEGG
T ss_pred HHHHHHHHHHHHHhCCCC---ceeEEEEECCCCCcccceecChhhc----cCCCcEEEEEC-------CCceEEEEEEcC
Confidence 788899999988776542 356788999999 899999984320 01233444432 233333111000
Q ss_pred CCCCCCCCCCCcchhhhcCCeeEecCcccEEEeeecCCCCCCCCCccccCCccc--ccceEEEE
Q 022406 178 PPRRRTPATNDDLSECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVI--EGEKWSAT 239 (297)
Q Consensus 178 ~~~~~~~~~~~~~~~C~~~~~~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~--~G~K~i~~ 239 (297)
....+. . -....+.|.-..|++|++.. .......|++-+.. .|.|+.+|
T Consensus 148 ~~~~~~-~-------~~~~~~~~~L~~GsllvM~g-----~~q~~w~H~Ip~~~~~~~~RislT 198 (204)
T 3s57_A 148 SRGKSP-S-------RRVAVVRLPLAHGSLLMMNH-----PTNTHWYHSLPVRKKVLAPRVNLT 198 (204)
T ss_dssp GCSSSC-S-------CCCCCEEEEECTTEEEEEET-----THHHHEEEEECCCTTCCSCEEEEE
T ss_pred CCcccc-c-------cCCceEEEECCCCCEEEECc-----hhhheeEeeccccCCCCCCEEEEE
Confidence 000000 0 00125789999999999952 22223568877765 26677665
No 16
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=96.15 E-value=0.012 Score=54.66 Aligned_cols=99 Identities=16% Similarity=0.238 Sum_probs=52.7
Q ss_pred eccCCcEEEEcCCCCHHHHHHHHHHHhcccccceeeeCCCCcccc---------ccccccccc-----ccCCCchHHHHH
Q 022406 38 ISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKL---------SDVRTSSGT-----FIPKGKDAIIAG 103 (297)
Q Consensus 38 ls~~P~i~~i~nfLs~~Ec~~li~~a~~~~~~s~v~~~~~g~~~~---------~~~R~s~~~-----~l~~~~~~v~~~ 103 (297)
.+.-|.+.++++|||++|-+.|++... +.+..... .|.... ..++-+... .++....+.+..
T Consensus 107 ~~lp~Gl~~~p~fis~~Ee~~Ll~~i~--w~~~~~~~--~~~~~l~~Rr~~~yG~~Y~Ys~~~~~~~~p~p~~~P~~L~~ 182 (345)
T 3tht_A 107 QALPPGLMVVEEIISSEEEKMLLESVD--WTEDTDNQ--NSQKSLKHRRVKHFGYEFHYENNNVDKDKPLSGGLPDICES 182 (345)
T ss_dssp CSCCTTEEEETTCSCHHHHHHHHTTCC--------------------CEEECCC------------------CCCHHHHH
T ss_pred ccCCCceEEEcCcCCHHHHHHHHHhcc--cCCccccc--cCcccccCceEEEECCcccccccccccCCCCCcCcCHHHHH
Confidence 455678999999999999998886553 21111000 000000 112211111 111123456677
Q ss_pred HHHHHHHhcCCCCCCCccceeeecCCCCcccccccccc
Q 022406 104 IEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYFS 141 (297)
Q Consensus 104 i~~ri~~~~~~p~~~~E~~qv~rY~~G~~y~~H~D~~~ 141 (297)
|.+|+......+ ...+...|..|.+|+.-.+|.|...
T Consensus 183 l~~r~~~~~~~~-~~~n~~lvN~Y~~G~~I~~H~D~~~ 219 (345)
T 3tht_A 183 FLEKWLRKGYIK-HKPDQMTINQYEPGQGIPAHIDTHS 219 (345)
T ss_dssp HHHHHHHHTSCS-SCCSEEEEEEECTTCCEEEECCCTT
T ss_pred HHHHHHhcccCC-CCCCEEEEEEecCCCCEeeccCCch
Confidence 888876532112 2234577889999999999999854
No 17
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=95.80 E-value=0.16 Score=43.76 Aligned_cols=108 Identities=17% Similarity=0.160 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHHhcCCCCCCCccceeeecCCCCccccccccccCcccccCCCceeEEEEEeecCCCCCcccccCCCCCCC
Q 022406 99 AIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEQEP 178 (297)
Q Consensus 99 ~v~~~i~~ri~~~~~~p~~~~E~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~~~~~~ 178 (297)
+.+..|.+++....+++...-+..-|..|.+|+.-.+|.|..... -+..++|+-+ |++.+|-......
T Consensus 84 ~~L~~l~~~~~~~~g~~~~~pn~~LvN~Y~~G~~i~~H~D~~e~~-----~~~pI~svSL-------G~~~~f~f~~~~~ 151 (211)
T 3i3q_A 84 QSFHNLCQRAATAAGYPDFQPDACLINRYAPGAKLSLHQDKDEPD-----LRAPIVSVSL-------GLPAIFQFGGLKR 151 (211)
T ss_dssp HHHHHHHHHHHHHTTCTTCCCCEEEEEEECTTCCEEEECCCCCSC-----TTSCEEEEEE-------ESCEEEEECCSST
T ss_pred HHHHHHHHHHHHhcCCCCcCCCEEEEEEEcCCCCcccccCCCccc-----cCCCEEEEEC-------CCCeEEEEecccC
Confidence 467788888887776543223567888999999999999963211 1234666553 5555554321100
Q ss_pred CCCCCCCCCCcchhhhcCCeeEecCcccEEEeeecCCCCCCCCCccccCCccccc-------ceEEEE
Q 022406 179 PRRRTPATNDDLSECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEG-------EKWSAT 239 (297)
Q Consensus 179 ~~~~~~~~~~~~~~C~~~~~~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~G-------~K~i~~ 239 (297)
. +..+.|.-..|++|++.. ..- ...|++.++..+ .|+.+|
T Consensus 152 ~---------------~~~~~i~L~~GsllvM~G-----~~r-~~~H~I~~~~~~~~p~~~~~RIsLT 198 (211)
T 3i3q_A 152 N---------------DPLKRLLLEHGDVVVWGG-----ESR-LFYHGIQPLKAGFHPLTIDCRYNLT 198 (211)
T ss_dssp T---------------SCCEEEEECTTCEEEECG-----GGT-TCCEEECCCCCCCBTTTBTCEEEEE
T ss_pred C---------------CceEEEECCCCCEEEECc-----hHH-ceEeccCcccCCcCCCCCCCEEEEE
Confidence 0 125789999999999942 222 257999888763 465555
No 18
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A
Probab=95.36 E-value=0.033 Score=50.48 Aligned_cols=126 Identities=10% Similarity=-0.018 Sum_probs=66.2
Q ss_pred cEEEEcCCCCHHHHHHHHHHHhcccccceeeeCCC--Cccccccccccccc---ccCCCchHHHHHHHHHHHHhcCCCCC
Q 022406 43 RAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLS--GESKLSDVRTSSGT---FIPKGKDAIIAGIEDKIATWTFLPKE 117 (297)
Q Consensus 43 ~i~~i~nfLs~~Ec~~li~~a~~~~~~s~v~~~~~--g~~~~~~~R~s~~~---~l~~~~~~v~~~i~~ri~~~~~~p~~ 117 (297)
..+++.+++|++|.+.|++..+.....+.+..... -+.....+|+..-. +.-.....+.+++..-+..++|-..-
T Consensus 41 GYLvlk~vFs~eEv~~l~~el~~~~~d~~~~k~~~~i~~~~s~~lrs~~H~~~~f~~h~~s~l~~rll~vl~~LlG~el~ 120 (344)
T 3nnf_A 41 GYCQIKKIFDFSAIKTIQKTLDQAKQESQISKEKVTLKLGGIDDIDTNDHAYDLVKYDFVSSFIQEKLALLNYITGKNLM 120 (344)
T ss_dssp SEEEETTCSCHHHHHHHHHHHHHHHHHCCCCSHHHHHHTTSCCCCBCSEEEECSSCHHHHHHHHGGGHHHHHHHHTSCEE
T ss_pred ceEEEcCCCCHHHHHHHHHHHHHHhhchhhhcccceecCCCccchhcccccchhHHHHHHHHHHHHHHHHHHHHhCCcee
Confidence 45689999999999999999886544433321000 00112345532111 11000012333344444444443321
Q ss_pred CCccceeeecCCCC-cccccccc--ccCcccccCCCceeEEEEEeecCCC--CCcccc-cCC
Q 022406 118 NGEDIQVLRYEHGQ-KYEPHYDY--FSDKVNIVRGGHRLATVLMYLSDVA--KGGETV-FPN 173 (297)
Q Consensus 118 ~~E~~qv~rY~~G~-~y~~H~D~--~~~~~~~~~~~~R~~T~liYLnd~~--~GGeT~-Fp~ 173 (297)
. -.-+...+.+|+ -|-||.|. +.-. ....|-+|+-|=|.+.. .+|... -|.
T Consensus 121 i-~qs~~fe~kPG~KGFpWH~D~~~F~~~----~~eD~a~S~WIpLd~i~~e~nGGM~~VP~ 177 (344)
T 3nnf_A 121 I-MHNALFSVEPNHKGLPWHVGVGSFSFT----KTEDFGASIWIPLDKITKEHRGGMQYVST 177 (344)
T ss_dssp E-EEEEEEEECBTCCBSCSBCTTTTTTTB----CTTSCEEEEEEESSCBCTTTBCSEEEECT
T ss_pred e-eecceEeeCCCCCCCCceecccccccc----cCCCCeEEEEEECCCCCccCCCceEEecC
Confidence 1 123456677775 58999994 3221 12458888888898765 355544 463
No 19
>2lg4_A Aurelin; antimicrobial protein; NMR {Aurelia aurita}
Probab=90.24 E-value=0.044 Score=33.90 Aligned_cols=12 Identities=33% Similarity=1.182 Sum_probs=10.4
Q ss_pred CcchhhhhcCCC
Q 022406 286 LPGFCRRSCKVC 297 (297)
Q Consensus 286 ~~~~C~~sC~~C 297 (297)
+.-+|+|+||.|
T Consensus 29 ~r~~C~kTCG~C 40 (40)
T 2lg4_A 29 LRANCKKTCGLC 40 (40)
Confidence 448999999998
No 20
>1bei_A SHK-DNP22, potassium channel toxin SHK; potassium channel inhibitor, SEA anemone, immunosuppressant neurotoxin; HET: DNP; NMR {Stichodactyla helianthus} SCOP: g.19.1.1 PDB: 1roo_A 2k9e_A* 1c2u_A*
Probab=88.98 E-value=0.11 Score=30.80 Aligned_cols=32 Identities=31% Similarity=1.031 Sum_probs=21.7
Q ss_pred ccccCc--cccHhHhhcCccccCcccccccccCcchhhhhcCCC
Q 022406 256 DCTDNN--ASCERWAALGECTKNPEYMVGSAQLPGFCRRSCKVC 297 (297)
Q Consensus 256 ~C~d~~--~~C~~wa~~geC~~n~~~m~~~~~~~~~C~~sC~~C 297 (297)
.|.|.- +.|... .|...-.|-+ .+|+|.||.|
T Consensus 2 ~c~d~ipks~ct~f----rcr~smkyrl------~~crktcgtc 35 (35)
T 1bei_A 2 SCIDTIPKSRCTAF----QCKHSMAYRL------SFCRKTCGTC 35 (35)
T ss_dssp CCCCCSCTTTTSHH----HHTTCC-CTT------TTSHHHHTCC
T ss_pred chHhhCchhhhhhh----hhhhhHHHHH------HHHHhhccCC
Confidence 355553 235433 3788877877 9999999998
No 21
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=85.46 E-value=2.5 Score=38.34 Aligned_cols=89 Identities=18% Similarity=0.216 Sum_probs=57.5
Q ss_pred cceeeecCCC------CccccccccccCcccccCCCceeEEEEEeecCCCCCcccccCCCCCCCCCCCCCCCCCcchhhh
Q 022406 121 DIQVLRYEHG------QKYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEQEPPRRRTPATNDDLSECA 194 (297)
Q Consensus 121 ~~qv~rY~~G------~~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~~C~ 194 (297)
.+++.+|.+- ....+|.|. -.+|+|+ .|...||=-+..+.
T Consensus 156 ~lrl~~YPp~~~~~~~~g~~~HtD~------------g~lTlL~--qd~~v~GLQV~~~g-------------------- 201 (319)
T 1w9y_A 156 GTKVSNYPPCPKPDLIKGLRAHTDA------------GGIILLF--QDDKVSGLQLLKDG-------------------- 201 (319)
T ss_dssp EEEEEECCCCSCGGGGSSCCCBCCS------------SSEEEEE--ESSSCCCEEEEETT--------------------
T ss_pred eeEEEecCCCcccccccccccccCC------------CceEEEE--ecCCCCeeeEeeCC--------------------
Confidence 4788899853 224567775 2688884 44445664444321
Q ss_pred cCCeeEecCcccEEEeee----cCCCCCCCCCccccCCcccccceEEEEEEEecc
Q 022406 195 KKGIAVKPRRGDALLFFS----LHTNAIPDPVSLHSGCPVIEGEKWSATKWIHVD 245 (297)
Q Consensus 195 ~~~~~V~P~~G~allF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~~ 245 (297)
..+.|+|..|..||--- ...|| .=..+.|++..-..++|+++.-+++-.
T Consensus 202 -~Wi~V~p~pgalvVNiGD~l~~~SnG-~~kS~~HRVv~~~~~~R~Sia~F~~p~ 254 (319)
T 1w9y_A 202 -QWIDVPPMRHSIVVNLGDQLEVITNG-KYKSVMHRVIAQKDGARMSLASFYNPG 254 (319)
T ss_dssp -EEEECCCCTTCEEEEECHHHHHHTTT-SSCCCCEEECCCSSSCCEEEEEEEECC
T ss_pred -eEEEcccCCCcEEEEhHHHHHHHhCC-eeecccceecCCCCCCceEEEEEecCC
Confidence 26899999998887421 12233 235789999766567899998888654
No 22
>1bgk_A BGK; neurotoxin, potassium channel inhibitor; NMR {Bunodosoma granulifera} SCOP: g.19.1.1
Probab=84.61 E-value=0.31 Score=29.08 Aligned_cols=34 Identities=29% Similarity=0.882 Sum_probs=26.5
Q ss_pred cccCc--cccHhHhhcCccccCcccccccccCcchhhhhcCCC
Q 022406 257 CTDNN--ASCERWAALGECTKNPEYMVGSAQLPGFCRRSCKVC 297 (297)
Q Consensus 257 C~d~~--~~C~~wa~~geC~~n~~~m~~~~~~~~~C~~sC~~C 297 (297)
|.|.- ..|..=-..|.|.....|- .||.|.||.|
T Consensus 2 ckd~f~~~~ckh~k~~~nc~tsqky~-------~ncaktc~~c 37 (37)
T 1bgk_A 2 CRDWFKETACRHAKSLGNCRTSQKYR-------ANCAKTCELC 37 (37)
T ss_dssp CCCCSCHHHHHHHHHHSTTTTSHHHH-------TTTHHHHTCC
T ss_pred chhHHHHHHHHHHHHcCCcchhHHHH-------HHHHHHhccC
Confidence 55543 3477777888999888876 7999999998
No 23
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=72.92 E-value=11 Score=34.41 Aligned_cols=89 Identities=17% Similarity=0.173 Sum_probs=56.6
Q ss_pred cceeeecCCC------CccccccccccCcccccCCCceeEEEEEeecCCCCCcccccCCCCCCCCCCCCCCCCCcchhhh
Q 022406 121 DIQVLRYEHG------QKYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEQEPPRRRTPATNDDLSECA 194 (297)
Q Consensus 121 ~~qv~rY~~G------~~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~~C~ 194 (297)
.+++.+|.+- ....+|.|. -.+|+|+. |. .||=-++.+.
T Consensus 211 ~lrl~~YPp~~~~~~~~g~~~HtD~------------g~lTlL~q--d~-v~GLQV~~~g-------------------- 255 (356)
T 1gp6_A 211 QMKINYYPKCPQPELALGVEAHTDV------------SALTFILH--NM-VPGLQLFYEG-------------------- 255 (356)
T ss_dssp EEEEEEECCCSSTTTCCSEEEECCC------------SSEEEEEE--CS-CCCEEEEETT--------------------
T ss_pred eeeeeecCCCCCcccccCcCCccCC------------CeEEEEEE--cC-CCCeEEecCC--------------------
Confidence 4778899853 124567775 25888854 42 4564444321
Q ss_pred cCCeeEecCcccEEEeee----cCCCCCCCCCccccCCcccccceEEEEEEEeccC
Q 022406 195 KKGIAVKPRRGDALLFFS----LHTNAIPDPVSLHSGCPVIEGEKWSATKWIHVDS 246 (297)
Q Consensus 195 ~~~~~V~P~~G~allF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~~~ 246 (297)
..+.|+|..|..||--- ...|| .-..++|++..-...+|+++.-+++-..
T Consensus 256 -~Wi~V~p~pgalvVNiGD~l~~~TnG-~~kS~~HRVv~~~~~~R~Sia~F~~P~~ 309 (356)
T 1gp6_A 256 -KWVTAKCVPDSIVMHIGDTLEILSNG-KYKSILHRGLVNKEKVRISWAVFCEPPK 309 (356)
T ss_dssp -EEEECCCCTTCEEEEECHHHHHHTTT-SSCCCCEEECCCSSCCEEEEEEEEECCT
T ss_pred -cEEECcCCCCeEEEEeccHHHHhcCC-EeeccCceecCCCCCCEEEEEEeecCCC
Confidence 26899999999887431 12233 2357899997555568999988886543
No 24
>3pl0_A Uncharacterized protein; quorum sensing, biofilm formation, double-stranded beta-HELI structural genomics; HET: MSE; 1.91A {Methylibium petroleiphilum}
Probab=69.14 E-value=8.3 Score=33.86 Aligned_cols=70 Identities=21% Similarity=0.291 Sum_probs=44.4
Q ss_pred ceeEEEEEeecCCCCCcccccCCCCCCCCCCCCCCCCCcchhhhcCCeeEe-cCcccEEEeeecCCCCCCCCCccccCCc
Q 022406 151 HRLATVLMYLSDVAKGGETVFPNAEQEPPRRRTPATNDDLSECAKKGIAVK-PRRGDALLFFSLHTNAIPDPVSLHSGCP 229 (297)
Q Consensus 151 ~R~~T~liYLnd~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~~C~~~~~~V~-P~~G~allF~n~~~~g~~D~~~lH~g~P 229 (297)
.-++.++|--+.+ .||+|.....+.. ....++ -..|+++++. |.+.+|.+.|
T Consensus 171 d~v~v~lv~R~Ni-~GGet~I~~~~~~------------------~~~~~~l~~p~d~llv~--------D~~~~H~vTp 223 (254)
T 3pl0_A 171 DFVAVVFIGRQGV-RGGETRVFDAAGP------------------QGVRFTLEQPWTVLLLD--------DQQVIHESTP 223 (254)
T ss_dssp SEEEEEEEEEESE-EECCEEEEETTSS------------------EEEEECCCSTTCEEEEE--------TTTEEEEECC
T ss_pred CEEEEEEecCCcc-ccceEEEEcCCCC------------------ccceeEecCCCcEEEEe--------CCcccCCCCc
Confidence 4566777777666 5888875443211 123333 3679998885 6789999999
Q ss_pred ccc---------cceEEEEEEEeccCc
Q 022406 230 VIE---------GEKWSATKWIHVDSF 247 (297)
Q Consensus 230 V~~---------G~K~i~~~Wi~~~~~ 247 (297)
|.. |.+-++..=++...|
T Consensus 224 I~~~~~~~~~~~g~RDvlVvtf~~~~~ 250 (254)
T 3pl0_A 224 LLPLDPADPAVPAHRDTLVLTYRSGGF 250 (254)
T ss_dssp EEESCTTCTTSCCEEEEEEEEEESSSC
T ss_pred cccCCCCCCCCceEEEEEEEEecCCcc
Confidence 984 556666655544433
No 25
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=68.84 E-value=9.5 Score=34.19 Aligned_cols=48 Identities=15% Similarity=0.085 Sum_probs=32.3
Q ss_pred CeeEecCcccEEEeee----cCCCCCCCCCccccCCccc-----ccceEEEEEEEecc
Q 022406 197 GIAVKPRRGDALLFFS----LHTNAIPDPVSLHSGCPVI-----EGEKWSATKWIHVD 245 (297)
Q Consensus 197 ~~~V~P~~G~allF~n----~~~~g~~D~~~lH~g~PV~-----~G~K~i~~~Wi~~~ 245 (297)
.+.|+|..|..||--- ...||. =..+.|++.... ..+|+++.-+++-.
T Consensus 212 W~~V~p~pg~lvVNiGD~l~~~TnG~-~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~ 268 (311)
T 1dcs_A 212 FTDLPYRPDAVLVFCGAIATLVTGGQ-VKAPRHHVAAPRRDQIAGSSRTSSVFFLRPN 268 (311)
T ss_dssp EEECCCCTTCEEEEECHHHHHHTTSC-SCCCCEEECCC----CTTCCEEEEEEEECCC
T ss_pred EEeCcCCCCeEEEEHHHHHHHHhCCc-ccCCCceEeCCCcccCCCCCeEEEEEEEcCC
Confidence 6899999998887421 123332 357899997654 45799988887544
No 26
>1xta_A Natrin 1; crisp, serine protease, ION channel blocking, cobra, toxin; 1.58A {Naja atra} PDB: 2giz_A 1xx5_A 3mz8_A 1rc9_A 1wvr_A
Probab=64.90 E-value=1.4 Score=37.79 Aligned_cols=34 Identities=15% Similarity=0.422 Sum_probs=29.1
Q ss_pred ccccccCccccHhHhhcCccccCcccccccccCcchhhhhcC
Q 022406 254 GGDCTDNNASCERWAALGECTKNPEYMVGSAQLPGFCRRSCK 295 (297)
Q Consensus 254 ~~~C~d~~~~C~~wa~~geC~~n~~~m~~~~~~~~~C~~sC~ 295 (297)
+..+.|...+|+.|.+..-|.. .||. .+|+.||.
T Consensus 182 ~~~~~d~~~~C~~~~~~~~c~~--~~~~------~~c~~~c~ 215 (221)
T 1xta_A 182 PCTIYNKLTNCDSLLKQSSCQD--DWIK------SNCPASCF 215 (221)
T ss_dssp BCCSCCSSSCHHHHHHHHCTTS--HHHH------HHCHHHHH
T ss_pred cccCCcccccchhhHhcCCCCC--hhHh------hCCcccCC
Confidence 3456789999999999999987 5899 99999994
No 27
>2cq7_A Cysteine-rich secretory protein-2; crisp, crisp-2, TPX-1, CRD, cystein-rich domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=57.76 E-value=5.1 Score=26.11 Aligned_cols=30 Identities=20% Similarity=0.543 Sum_probs=25.4
Q ss_pred ccCccccHhHhhcCccccCcccccccccCcchhhhhcC
Q 022406 258 TDNNASCERWAALGECTKNPEYMVGSAQLPGFCRRSCK 295 (297)
Q Consensus 258 ~d~~~~C~~wa~~geC~~n~~~m~~~~~~~~~C~~sC~ 295 (297)
.|...+|..-++.--|+. .+|. .+|+.||-
T Consensus 12 ~D~ysNC~~l~~~~gC~~--~~~k------~~C~ATC~ 41 (49)
T 2cq7_A 12 QDLLSNCDSLKNTAGCEH--ELLK------EKCKATCL 41 (49)
T ss_dssp CCSSSSHHHHHTTTCTTS--SSSS------STTHHHHS
T ss_pred cccccChHHHHHHcCCCC--hhhh------cCCCCeee
Confidence 366689999999988997 4798 99999994
No 28
>1rju_V Metallothionein; Cu(I)-thiolate, metal binding protein; 1.44A {Synthetic} SCOP: g.46.1.1 PDB: 1aoo_A 1aqq_A 1aqr_A 1fmy_A
Probab=55.18 E-value=4.5 Score=23.58 Aligned_cols=8 Identities=38% Similarity=1.086 Sum_probs=5.8
Q ss_pred chhhhhcC
Q 022406 288 GFCRRSCK 295 (297)
Q Consensus 288 ~~C~~sC~ 295 (297)
..|+|||.
T Consensus 14 eqcqkscs 21 (36)
T 1rju_V 14 EQCQKSCS 21 (36)
T ss_dssp GGGTTSCC
T ss_pred HHHhhcCC
Confidence 66888874
No 29
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=50.83 E-value=37 Score=30.21 Aligned_cols=103 Identities=19% Similarity=0.273 Sum_probs=58.3
Q ss_pred cceeeecCCC------CccccccccccCcccccCCCceeEEEEEeecCCCCCcccccCCCCCCCCCCCCCCCCCcchhhh
Q 022406 121 DIQVLRYEHG------QKYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEQEPPRRRTPATNDDLSECA 194 (297)
Q Consensus 121 ~~qv~rY~~G------~~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~~C~ 194 (297)
.+++++|.+- -.-.+|.|. -.+|+|+ .|. .||=-+....+
T Consensus 170 ~lr~~~Ypp~~~~~~~~g~~~HtD~------------g~lTlL~--qd~-v~GLqV~~~~g------------------- 215 (312)
T 3oox_A 170 VLRLLHYPPIPKDATGVRAGAHGDI------------NTITLLL--GAE-EGGLEVLDRDG------------------- 215 (312)
T ss_dssp EEEEEEECCCSSCCC--CEEEECCC------------SSEEEEE--CCT-TSCEEEECTTS-------------------
T ss_pred eeeeEecCCCCCCcCCcCccceecC------------ceEEEEe--EcC-cCceEEECCCC-------------------
Confidence 4788889862 123467775 2688884 442 45533432211
Q ss_pred cCCeeEecCcccEEEeee----cCCCCCCCCCccccCCccc----ccceEEEEEEEeccCcccccCCccccccC
Q 022406 195 KKGIAVKPRRGDALLFFS----LHTNAIPDPVSLHSGCPVI----EGEKWSATKWIHVDSFDKIVEEGGDCTDN 260 (297)
Q Consensus 195 ~~~~~V~P~~G~allF~n----~~~~g~~D~~~lH~g~PV~----~G~K~i~~~Wi~~~~~~~~~~~~~~C~d~ 260 (297)
..+.|+|..|..||--- ...|| .-..+.|++.... ...|+++.-+++-.. +........|.+.
T Consensus 216 -~W~~V~p~pg~~vVNiGD~l~~~TnG-~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~-d~~i~pl~~~v~~ 286 (312)
T 3oox_A 216 -QWLPINPPPGCLVINIGDMLERLTNN-VLPSTVHRVVNPPPERRGVPRYSTPFFLHFAS-DYEIKTLQNCVTA 286 (312)
T ss_dssp -CEEECCCCSSCEEEEECHHHHHHTTT-SSCCCCEEECCCCGGGTTSCEEECCEEECCCT-TCEECCCGGGCCS
T ss_pred -cEEECCCCCCeEEEEhHHHHHHHhCC-eecCCCceEeCCCccCCCCCEEEEEEEecCCC-CcEEecCccccCC
Confidence 26899999999887421 12333 2357889985431 235888888775432 2221223456554
No 30
>1o51_A Hypothetical protein TM0021; ferredoxin-like fold, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.50A {Thermotoga maritima} SCOP: d.58.5.4
Probab=41.37 E-value=36 Score=25.92 Aligned_cols=74 Identities=15% Similarity=0.093 Sum_probs=36.8
Q ss_pred HHHHHHHHHhc-ccccceeeeCCCCcccccccccccccccCCC---------chHHHHHHHHHHHHhcCCCCCCCcccee
Q 022406 55 ECDHLINLAKS-QLKRSAVADNLSGESKLSDVRTSSGTFIPKG---------KDAIIAGIEDKIATWTFLPKENGEDIQV 124 (297)
Q Consensus 55 Ec~~li~~a~~-~~~~s~v~~~~~g~~~~~~~R~s~~~~l~~~---------~~~v~~~i~~ri~~~~~~p~~~~E~~qv 124 (297)
..+.|+++++. ++..++|..+..|......+++.....+... ..+-++++.+++.++..-..-..++.++
T Consensus 31 L~~~Iv~~~~~~GiaGaTV~rgi~GfG~~g~ih~~~~l~ls~dlPV~Ie~Vd~~eki~~~l~~l~~~v~~Glvt~e~V~V 110 (114)
T 1o51_A 31 LFEYLVKRAYELGMKGVTVYRGIMGFGHKRHMHRSDFFSLSPDLPIVLEIVDEEERINLFLKEIDNIDFDGLVFTADVNV 110 (114)
T ss_dssp HHHHHHHHHHHTTCSCCEEEECSCCCCC-------------CCCEEEEEEEECHHHHHHHHHHHHTCCCCSEEEEEEEEC
T ss_pred HHHHHHHHHHHCCCCeEEEEcCcEEECCCCCEEccceeecCCCCCEEEEEEcCHHHHHHHHHHHHHHhCCCEEEEEEEEE
Confidence 35778888776 5667778766666544444555444333321 2455677777777765422223577888
Q ss_pred eecC
Q 022406 125 LRYE 128 (297)
Q Consensus 125 ~rY~ 128 (297)
.+|.
T Consensus 111 ~r~~ 114 (114)
T 1o51_A 111 VKMG 114 (114)
T ss_dssp CC--
T ss_pred EecC
Confidence 8873
No 31
>2pp6_A Gifsy-2 prophage ATP-binding sugar transporter-LI protein; beta barrel, 4 helix bundle, structural genomics, PSI-2; 2.70A {Salmonella typhimurium LT2} SCOP: b.106.1.2
Probab=41.13 E-value=22 Score=26.61 Aligned_cols=26 Identities=31% Similarity=0.673 Sum_probs=22.3
Q ss_pred EecCcccEEEeeecCCCCCCCCCccccCCcccccceEEEEEEEeccC
Q 022406 200 VKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIHVDS 246 (297)
Q Consensus 200 V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~~~ 246 (297)
.+|++|+.|+| .|..|+.+.|-+...
T Consensus 62 YrP~r~D~Vv~---------------------~Gk~y~Vtr~~~~ng 87 (102)
T 2pp6_A 62 VIPRRGDRVVL---------------------RGSEFTVTRIRRFNG 87 (102)
T ss_dssp CCCCTTCEEEE---------------------TTEEEEEEEEEEETT
T ss_pred cccCCCCEEEE---------------------cCcEEEEEEEEEECC
Confidence 78999999998 389999999987664
No 32
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=40.91 E-value=25 Score=30.33 Aligned_cols=40 Identities=10% Similarity=-0.138 Sum_probs=33.1
Q ss_pred CCeeEecCcccEEEeeecCCCCCCCCCccccCCcccc--cceEEEEEEEe
Q 022406 196 KGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIE--GEKWSATKWIH 243 (297)
Q Consensus 196 ~~~~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~--G~K~i~~~Wi~ 243 (297)
..+.++=++|++|||.| .+++|+..+-.. +.|+..+.|+.
T Consensus 230 ~~~~~~w~~GD~~i~DN--------~~vlH~R~~f~~~~~~R~l~R~~i~ 271 (273)
T 1nx8_A 230 YYYKHFWEDGDLLIMDN--------RRVIHEREEFNDDDIVRRLYRGQTA 271 (273)
T ss_dssp TEEEECCCTTCEEEEET--------TTEEEEECCCCCTTCEEEEEEEEEE
T ss_pred eEEEeEecCCCEEEEEC--------CeeeeccccCCCCCCCeEEEEeecc
Confidence 35788889999999987 489999999764 47888888874
No 33
>2wbq_A L-arginine beta-hydroxylase; oxidoreductase, non-heme Fe(II) hydroxylase, cbeta- hydroxylation, L-arginine oxygenase, NRPS, viomycin; HET: ZZU; 1.10A {Streptomyces vinaceus} PDB: 2wbp_A* 2wbo_A*
Probab=40.33 E-value=27 Score=31.56 Aligned_cols=43 Identities=16% Similarity=0.235 Sum_probs=34.8
Q ss_pred CCeeEecCcccEEEeeecCCCCCCCCCccccCCccc---cc-ceEEEEEEEeccC
Q 022406 196 KGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVI---EG-EKWSATKWIHVDS 246 (297)
Q Consensus 196 ~~~~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~---~G-~K~i~~~Wi~~~~ 246 (297)
..+.++=++|++|||.| .+++|+..+.. .| .||....|+....
T Consensus 295 ~~~~~~w~pGDv~i~DN--------r~vlH~R~~f~~~~~~~~R~L~R~~i~~d~ 341 (358)
T 2wbq_A 295 SLYELVLDQGDVAFIDN--------RRAVHGRRAFQPRYDGRDRWLKRINITRDL 341 (358)
T ss_dssp HCEEEECCTTCEEEEET--------TTEEEEECCCCCCCSSCCCEEEEEEEESCG
T ss_pred hceEEeecCCCEEEEeC--------cccccCCCCCCCCCCCCCceEEEEEEecCc
Confidence 35688889999999987 58999988865 24 7999999997653
No 34
>2og5_A Putative oxygenase; non-ribosomal peptide synthesis, iron(II)/alpha-ketoglutarat dependent hydroxylase, jelly-roll fold; 1.45A {Streptomyces coelicolor} PDB: 2og6_A 2og7_A*
Probab=39.80 E-value=26 Score=31.80 Aligned_cols=42 Identities=12% Similarity=0.306 Sum_probs=34.8
Q ss_pred CeeEecCcccEEEeeecCCCCCCCCCccccCCcccc----cceEEEEEEEeccC
Q 022406 197 GIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIE----GEKWSATKWIHVDS 246 (297)
Q Consensus 197 ~~~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~----G~K~i~~~Wi~~~~ 246 (297)
.+.++=++|++|||.| .+++|+..+... +.||....|+....
T Consensus 291 ~~~~~w~pGDivi~DN--------~~vlH~R~~f~d~~~~~~R~L~R~~i~~d~ 336 (357)
T 2og5_A 291 AVTHRLLPGELAIVDN--------RVTVHGRTEFTPRYDGTDRWLQRTFVLTDL 336 (357)
T ss_dssp CEEECCCTTCEEEEET--------TTEEEEECCCCCCCSSCSCEEEEEEEESCG
T ss_pred eEEEeeCCCCEEEEeC--------CccccCCCCCCCCCCCCCcEEEEEEEcccc
Confidence 5788889999999987 589999888752 48999999997653
No 35
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=39.08 E-value=36 Score=30.54 Aligned_cols=47 Identities=13% Similarity=0.054 Sum_probs=31.1
Q ss_pred CeeEecCcccEEEeee----cCCCCCCCCCccccCCcccccceEEEEEEEecc
Q 022406 197 GIAVKPRRGDALLFFS----LHTNAIPDPVSLHSGCPVIEGEKWSATKWIHVD 245 (297)
Q Consensus 197 ~~~V~P~~G~allF~n----~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~~ 245 (297)
.+.|+|..|..||--- ...|| .=..+.|++.. ...+|+++.-+++-.
T Consensus 239 Wi~V~p~pgalvVNiGD~l~~~TnG-~~kS~~HRVv~-~~~~R~Sia~F~~P~ 289 (331)
T 1odm_A 239 YQDIEADDTGYLINCGSYMAHLTNN-YYKAPIHRVKW-VNAERQSLPFFVNLG 289 (331)
T ss_dssp EEECCCCTTSEEEEECHHHHHHTTT-SSCCCCEEEEC-CCSCEEEEEEEECCC
T ss_pred eEECCCCCCeEEEEccHHHHHHhCC-EeeCCCceeCC-CCCCEEEEEEEEcCC
Confidence 5889999999887421 12333 23578999843 245799988888543
No 36
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=36.57 E-value=12 Score=35.56 Aligned_cols=41 Identities=22% Similarity=0.477 Sum_probs=32.6
Q ss_pred CeeEec--CcccEEEeeecCCCCCCCCCccccCCcccccceEEEEEEEeccC
Q 022406 197 GIAVKP--RRGDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIHVDS 246 (297)
Q Consensus 197 ~~~V~P--~~G~allF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~Wi~~~~ 246 (297)
.+.+.| +.||.|+|.+ ++.|++.|+..|..+....+|-..|
T Consensus 364 ~mv~iP~vePGD~V~WH~---------D~iH~V~~~h~g~~~s~V~YIpa~P 406 (461)
T 2dbn_A 364 ALTSIPKLEAGDSVWWHC---------DVIHSVAPVENQQGWGNVMYIPAAP 406 (461)
T ss_dssp TCEECCCBCTTCEEEEET---------TCCEEECCBSSCCSCCCEEECCBCE
T ss_pred ceeeCCCCCCCCEEEEcC---------CCccccccCCCCCcceeEEEecCCC
Confidence 344555 5699999975 7999999999999998888885444
No 37
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=35.15 E-value=25 Score=30.76 Aligned_cols=37 Identities=24% Similarity=0.132 Sum_probs=26.8
Q ss_pred CccccccccccCcccccCCCceeEEEEEeecCCCCCcccccCC
Q 022406 131 QKYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPN 173 (297)
Q Consensus 131 ~~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~ 173 (297)
+...||.|..+.. ..-.+++|.-+.-+..||+|.|-+
T Consensus 92 ~~~~wH~D~sy~~------~pp~~~~l~~~~~p~~GG~T~~~d 128 (277)
T 3pvj_A 92 DNAVWHTDVTFLP------TPALGAVLSAKQLPAYGGDTLWAS 128 (277)
T ss_dssp GGSSCBCTTTTSS------SCCCEEEEEEEECCSSCCCEEEEE
T ss_pred cCCCceeeCCCcC------CCCceEEEEeeccCCCCCCcEeee
Confidence 4567999997653 123467777777778999999854
No 38
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=34.39 E-value=29 Score=30.10 Aligned_cols=34 Identities=18% Similarity=0.152 Sum_probs=24.8
Q ss_pred ccccccccCcccccCCCceeEEEEEeecCCCCCcccccCC
Q 022406 134 EPHYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPN 173 (297)
Q Consensus 134 ~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~ 173 (297)
.||.|..... ..-.+++|.-+.-+..||+|.|-+
T Consensus 97 ~wHtD~sy~~------~pp~~~~L~c~~~p~~GG~T~~~d 130 (283)
T 1otj_A 97 NWHTDVTFIE------TPPAGAILAAKELPSTGGDTLWTS 130 (283)
T ss_dssp SCBCTTTTSS------SCEEEEEEEEEECCSSCCCEEEEE
T ss_pred CcEeeccCcc------CCCceEEEEEEecCCCCCcceeee
Confidence 5899987643 234567777777778899999855
No 39
>1ds1_A Clavaminate synthase 1; oxygenase, trifunctional enzyme, oxidoreductase,lyase; HET: AKG; 1.08A {Streptomyces clavuligerus} SCOP: b.82.2.2 PDB: 1drt_A* 1ds0_A 1dry_A* 1gvg_A*
Probab=32.85 E-value=40 Score=29.94 Aligned_cols=43 Identities=26% Similarity=0.390 Sum_probs=35.3
Q ss_pred cCCeeEecCcccEEEeeecCCCCCCCCCccccCCcccc---c-ceEEEEEEEecc
Q 022406 195 KKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIE---G-EKWSATKWIHVD 245 (297)
Q Consensus 195 ~~~~~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~---G-~K~i~~~Wi~~~ 245 (297)
+..+.++=++|++|||.| .+++|+-.+... | .||....|+...
T Consensus 257 ~~~~~~~w~~GDv~i~DN--------~~~lH~R~~f~~~~~~~~R~L~R~~v~~d 303 (324)
T 1ds1_A 257 EVTEAVYLEPGDLLIVDN--------FRTTHARTPFSPRWDGKDRWLHRVYIRTD 303 (324)
T ss_dssp HTCEEECCCTTCEEEEET--------TTEEEEECCCCCCCSSCCCEEEEEEEECS
T ss_pred hccEEEeeCCCCEEEEeC--------CceeecCCccCCCCCCCCcEEEEEEEecC
Confidence 346889999999999987 489999888753 3 799999999655
No 40
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=32.52 E-value=44 Score=28.92 Aligned_cols=41 Identities=12% Similarity=0.019 Sum_probs=34.0
Q ss_pred CeeEecCcccEEEeeecCCCCCCCCCccccCCccc-ccceEEEEEEEecc
Q 022406 197 GIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVI-EGEKWSATKWIHVD 245 (297)
Q Consensus 197 ~~~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~-~G~K~i~~~Wi~~~ 245 (297)
.+.++=++|++|||.| .+++|+..+-. .+.|+....|+...
T Consensus 235 ~~~~~w~~GDv~i~DN--------~~~lH~r~~f~~~~~R~l~R~~i~~d 276 (283)
T 1otj_A 235 QVRWRWQPNDIAIWDN--------RVTQHYANADYLPQRRIMHRATILGD 276 (283)
T ss_dssp EEEECCCTTCEEEEET--------TSEEEEECCCCTTSCEEEEEEEEECC
T ss_pred EEEeeEcCCCEEEEEC--------cceeecccCCCCCCceEEEEEEEecC
Confidence 4788889999999987 48999999976 45788989999653
No 41
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=31.68 E-value=33 Score=30.10 Aligned_cols=38 Identities=26% Similarity=0.250 Sum_probs=26.5
Q ss_pred CCccccccccccCcccccCCCceeEEEEEeecCCCCCcccccCC
Q 022406 130 GQKYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPN 173 (297)
Q Consensus 130 G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~ 173 (297)
+....||.|..+.. ..-.+++|.-+.-+..||+|.|-+
T Consensus 102 ~~~~~wHtD~sy~~------~pP~~~~L~c~~~p~~GG~T~~ad 139 (301)
T 1oih_A 102 QRANSWHTDVTFVE------AYPKASILRSVVAPASGGDTVWAN 139 (301)
T ss_dssp -CCCSCBCTTTTSS------SCCSEEEEEEEECCSSCCCEEEEE
T ss_pred CcCcCCEecccCcC------CCCceEEEEEeecCCCCCcccccc
Confidence 34567999997653 233567777777778899998854
No 42
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=30.83 E-value=44 Score=30.76 Aligned_cols=43 Identities=16% Similarity=0.131 Sum_probs=35.3
Q ss_pred cCCeeEecCcccEEEeeecCCCCCCCCCccccCCcccc--c-ceEEEEEEEecc
Q 022406 195 KKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIE--G-EKWSATKWIHVD 245 (297)
Q Consensus 195 ~~~~~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~--G-~K~i~~~Wi~~~ 245 (297)
+..+.++=++|++|||.| .+++|+..+... | .|+....|+...
T Consensus 326 ~~~~~~~~~pGd~vi~DN--------r~~lH~R~~f~~~~~~~R~L~r~yi~~d 371 (388)
T 3o2g_A 326 ESKFTFKMNPGDVITFDN--------WRLLHGRRSYEAGTEISRHLEGAYADWD 371 (388)
T ss_dssp TTCEEECCCTTCEEEEET--------TTEEEEECCCCCCSSCSCEEEEEEECHH
T ss_pred hhEEEEEcCCCcEEEEeC--------cEEeeCCCCcCCCCCCCEEEEEEEEcch
Confidence 345889999999999987 589999988774 4 899999999654
No 43
>2a05_A Cysteine-rich secretory protein-2; alpha helices, 5 disulphide bonds, 2 domains, signaling protein; NMR {Mus musculus}
Probab=29.89 E-value=15 Score=24.55 Aligned_cols=29 Identities=21% Similarity=0.527 Sum_probs=24.6
Q ss_pred cCccccHhHhhcCccccCcccccccccCcchhhhhcC
Q 022406 259 DNNASCERWAALGECTKNPEYMVGSAQLPGFCRRSCK 295 (297)
Q Consensus 259 d~~~~C~~wa~~geC~~n~~~m~~~~~~~~~C~~sC~ 295 (297)
|...+|....+.--|+.+ +|+ .+|+.||.
T Consensus 23 D~~sNC~~l~~~~~C~~~--~~k------~~C~AtC~ 51 (57)
T 2a05_A 23 DLLSNCESLKTSAGCKHE--LLK------TKCQATCL 51 (57)
T ss_dssp CSSTTHHHHHHHSCTTST--THH------HHSHHHHT
T ss_pred ccccccHHHHHhcCCCCh--hHh------cCCCCccc
Confidence 666889999998889974 788 99999994
No 44
>1aqs_A Cu-MT, Cu-metallothionein; copper detoxification, metal-thiolate cluster; NMR {Saccharomyces cerevisiae} SCOP: g.46.1.1
Probab=28.77 E-value=18 Score=22.77 Aligned_cols=8 Identities=38% Similarity=1.086 Sum_probs=5.0
Q ss_pred chhhhhcC
Q 022406 288 GFCRRSCK 295 (297)
Q Consensus 288 ~~C~~sC~ 295 (297)
..|+|||.
T Consensus 18 eqcqkscs 25 (53)
T 1aqs_A 18 EQCQKSCS 25 (53)
T ss_dssp TTSTTSCS
T ss_pred HHHhhcCC
Confidence 55777663
No 45
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=28.68 E-value=38 Score=30.05 Aligned_cols=37 Identities=19% Similarity=0.171 Sum_probs=25.9
Q ss_pred CccccccccccCcccccCCCceeEEEEEeecCCCCCcccccCC
Q 022406 131 QKYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPN 173 (297)
Q Consensus 131 ~~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~ 173 (297)
....||.|..+.. ..-.+++|.-+.-+..||+|.|-+
T Consensus 98 ~~~~wH~D~s~~~------~pp~~~~l~~~~~p~~GG~T~fad 134 (301)
T 3r1j_A 98 KATRWHTDVTFAA------NYPAASILRAVTLPSYGGSTLWAS 134 (301)
T ss_dssp -CCSCBCTTTTSS------SCCSEEEEEEEECCSSCCCEEEEE
T ss_pred CCCCCccccCCcc------CCCceeEEEEeecCCCCCCCeeEc
Confidence 4567999998753 223467777777778999999853
No 46
>2ddb_A Pseudecin, channel blocker; crisp, snake venom, CNG channel, toxin; 1.90A {Pseudechis porphyriacus} PDB: 2epf_A 2dda_A
Probab=27.66 E-value=13 Score=31.25 Aligned_cols=32 Identities=22% Similarity=0.572 Sum_probs=26.9
Q ss_pred ccccCccccHhHhhcCccccCcccccccccCcchhhhhcC
Q 022406 256 DCTDNNASCERWAALGECTKNPEYMVGSAQLPGFCRRSCK 295 (297)
Q Consensus 256 ~C~d~~~~C~~wa~~geC~~n~~~m~~~~~~~~~C~~sC~ 295 (297)
...|...+|+.|.+..-|.. .+|. .+|+.||-
T Consensus 173 ~~~~~~~~c~~~~~~~~c~~--~~~~------~~c~~~c~ 204 (210)
T 2ddb_A 173 NYNNDFSNCKSLAKKSKCQT--EWIK------KKCPASCF 204 (210)
T ss_dssp CCCCSSTTHHHHHHHHTTCS--HHHH------HHCHHHHH
T ss_pred cccCccccchhHhhcCCCCC--hhHh------cCCccccC
Confidence 34588899999999988976 4788 99999993
No 47
>2q4a_A Clavaminate synthase-like protein AT3G21360; ensemble refinement, refinement methodology development, AT3 structural genomics; 2.39A {Arabidopsis thaliana} SCOP: b.82.2.8 PDB: 1y0z_A
Probab=27.37 E-value=32 Score=30.64 Aligned_cols=39 Identities=18% Similarity=0.058 Sum_probs=27.1
Q ss_pred CCCccccccccccCcccccCCCceeEEEEEeecCCCCCcccccCC
Q 022406 129 HGQKYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPN 173 (297)
Q Consensus 129 ~G~~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~ 173 (297)
.+....+|.|..+.. ..-.+++|.-+.-+.+||+|.|-+
T Consensus 113 ~~~~~~~HtD~sy~~------~pP~~~~L~c~~~p~~GG~T~~ad 151 (330)
T 2q4a_A 113 PDQKIPFHHEMAQVR------EFPSKLFFYCEIEPKCGGETPIVL 151 (330)
T ss_dssp TTSCEEEECTTTTST------TCCSEEEEEEEECCSEECCCCEEE
T ss_pred CccccccccccCCCC------CCCceEEEECcCCCCcCCceeeec
Confidence 345667999987643 122466776677777899999865
No 48
>3dqy_A Toluene 1,2-dioxygenase system ferredoxin subunit; rieske, iron-sulfur cluster, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport; 1.20A {Pseudomonas putida} SCOP: b.33.1.0 PDB: 4emj_B*
Probab=26.21 E-value=90 Score=22.57 Aligned_cols=29 Identities=14% Similarity=0.177 Sum_probs=21.7
Q ss_pred CeeEecCcccEEEeeecCCCCCCCCCccccCCcccccc
Q 022406 197 GIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEGE 234 (297)
Q Consensus 197 ~~~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~G~ 234 (297)
.+.|--..|....|.| ...|.++|+..|.
T Consensus 25 ~i~v~r~~g~~~A~~~---------~CpH~g~~L~~g~ 53 (106)
T 3dqy_A 25 PVMVCNVDGEFFAVQD---------TCTHGDWALSDGY 53 (106)
T ss_dssp CEEEEEETTEEEEEES---------BCSSSSCBGGGSE
T ss_pred EEEEEEECCEEEEEeC---------cCCCCCCCCcCcE
Confidence 4555546788888876 6889999998763
No 49
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=23.13 E-value=74 Score=27.76 Aligned_cols=89 Identities=18% Similarity=0.187 Sum_probs=53.0
Q ss_pred cceeeecCCCC--------ccccccccccCcccccCCCceeEEEEEeecCCCCCcccccCCCCCCCCCCCCCCCCCcchh
Q 022406 121 DIQVLRYEHGQ--------KYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEQEPPRRRTPATNDDLSE 192 (297)
Q Consensus 121 ~~qv~rY~~G~--------~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~~~~~~~~~~~~~~~~~~~~ 192 (297)
.+++++|.+-. ...+|.|. -.+|+|+ .| ..||=-+....+
T Consensus 151 ~lr~~~YP~~~~~~~~~~~g~~~HtD~------------g~lTlL~--qd-~~~GLqV~~~~g----------------- 198 (280)
T 3on7_A 151 LLRILHYPPMTGDEEMGAIRAAAHEDI------------NLITVLP--TA-NEPGLQVKAKDG----------------- 198 (280)
T ss_dssp EEEEEEECCCCTTCCCCSEEEEEECCC------------SSEEEEE--CC-SCCCEEEECTTS-----------------
T ss_pred eEEEEECCCCCCccccCcccccCCCCC------------CeEEEEE--ec-CCCCeEEEcCCC-----------------
Confidence 47888998531 13467775 2678884 44 345543442211
Q ss_pred hhcCCeeEecCcccEEEeee----cCCCCCCCCCccccCCccc----ccceEEEEEEEecc
Q 022406 193 CAKKGIAVKPRRGDALLFFS----LHTNAIPDPVSLHSGCPVI----EGEKWSATKWIHVD 245 (297)
Q Consensus 193 C~~~~~~V~P~~G~allF~n----~~~~g~~D~~~lH~g~PV~----~G~K~i~~~Wi~~~ 245 (297)
..+.|+|..|..||--- ...|| .-..+.|++.... ..+||++.-+++-.
T Consensus 199 ---~W~~V~p~pg~~vVNiGD~l~~~Tng-~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~ 255 (280)
T 3on7_A 199 ---SWLDVPSDFGNIIINIGDMLQEASDG-YFPSTSHRVINPEGTDKTKSRISLPLFLHPH 255 (280)
T ss_dssp ---CEEECCCCTTCEEEEECHHHHHHTTT-SSCCCCEEEECCTTCCTTSCEEECCEEECCC
T ss_pred ---CEEECcCCCCEEEEEcChHHHHHhCC-cccCCCceEeCCCCCCCCCCeEEEEEEEcCC
Confidence 26899999999888421 12333 2357889974431 34788888777443
No 50
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=23.01 E-value=36 Score=29.30 Aligned_cols=38 Identities=13% Similarity=-0.165 Sum_probs=25.6
Q ss_pred CccccccccccCcccccCCCceeEEEEEeecCCC--CCcccccCCC
Q 022406 131 QKYEPHYDYFSDKVNIVRGGHRLATVLMYLSDVA--KGGETVFPNA 174 (297)
Q Consensus 131 ~~y~~H~D~~~~~~~~~~~~~R~~T~liYLnd~~--~GGeT~Fp~~ 174 (297)
....+|.|..... ..-.+++|.-+.-+. +||+|.|-+.
T Consensus 96 ~~~~~HtD~sy~~------~pp~~~~L~c~~~p~~~~GG~T~~~d~ 135 (273)
T 1nx8_A 96 GQLPFHADGGLLL------SQVDQVFLYAAEIKNVKFRGATTVCDH 135 (273)
T ss_dssp SCEEEECTTTTTT------CCCCEEEEEEEEEESCSSSSCEEEEEH
T ss_pred cCCCCcCCCCCcc------CCCeeEEEEeEeCCCCCCCCcchhhhH
Confidence 3456899987643 123456666666666 8999999763
No 51
>2q4a_A Clavaminate synthase-like protein AT3G21360; ensemble refinement, refinement methodology development, AT3 structural genomics; 2.39A {Arabidopsis thaliana} SCOP: b.82.2.8 PDB: 1y0z_A
Probab=20.78 E-value=51 Score=29.24 Aligned_cols=37 Identities=30% Similarity=0.341 Sum_probs=28.5
Q ss_pred cCCeeEecCcccEEEeeecCCCCCCCCCccccCCcccccceEEEEE
Q 022406 195 KKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATK 240 (297)
Q Consensus 195 ~~~~~V~P~~G~allF~n~~~~g~~D~~~lH~g~PV~~G~K~i~~~ 240 (297)
+..+.++=++|++|||.| .+++|+..|- .|.+.++..
T Consensus 291 ~~~~~~~w~~GDv~i~DN--------~~~lH~R~~f-~g~rR~l~r 327 (330)
T 2q4a_A 291 EECVAVPWQRGDVLLIDN--------WAVLHSRRPF-DPPRRVLAS 327 (330)
T ss_dssp HHCBCCCCCTTCEEEEET--------TTEEEEECCE-ESCCEEEEE
T ss_pred hhEeecCCCCCCEEEEec--------ccccccCCCC-CCCceEEEe
Confidence 345778889999999987 4899999995 676655543
Done!