BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 022407
(297 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q45223|HBD_BRAJA 3-hydroxybutyryl-CoA dehydrogenase OS=Bradyrhizobium japonicum
(strain USDA 110) GN=hbdA PE=3 SV=1
Length = 293
Score = 319 bits (818), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 156/285 (54%), Positives = 199/285 (69%)
Query: 1 MEEKMKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQ 60
M +K +GV+G+GQMG+GIA + + G DV L D D L +I+ ++ + VSK
Sbjct: 1 MAAVIKKVGVIGAGQMGNGIAHVAALAGFDVVLNDVSADRLKSGMATINGNLARQVSKKV 60
Query: 61 LSQAMGTDAPRRLRCTSNLKDLHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNT 120
+++ T A R+ L DL D+++E VE E+VK+K+F EL + K AI+AS+T
Sbjct: 61 VTEEAKTKALSRIVAAEKLDDLADCDLVIETAVEKEEVKRKIFHELCAVLKPEAIVASDT 120
Query: 121 SSISITRLASATSRPCQVIGMHFMNPPPLMKLVEVIRGADTSDETFRATKALAERFGKTV 180
SSISITRLA+AT RP + IG+HFMNP PLM+LVE+IRG T D TF A+K + GK V
Sbjct: 121 SSISITRLAAATDRPERFIGIHFMNPVPLMELVELIRGIATDDATFEASKEFVAKLGKQV 180
Query: 181 VCSQDYAGFIVNRILMPMINEAFFTLYTGVATKEDIDAGMKLGTNQPMGPLQLADFIGLD 240
S+D+ FIVNRIL+PMINEA +TLY GV E IDA MKLG + PMGPL+LADFIGLD
Sbjct: 181 AVSEDFPAFIVNRILLPMINEAIYTLYEGVGNVEAIDAAMKLGAHHPMGPLELADFIGLD 240
Query: 241 VCLSIMKVLHTGLGDSKYAPCPLLVQYVDAGRLGKKRGIGVFDYR 285
CLSIM+VLH GL DSKY PCPLLV+YV+AG LG+K G +DYR
Sbjct: 241 TCLSIMQVLHEGLADSKYRPCPLLVKYVEAGWLGRKTQRGFYDYR 285
>sp|P45856|HBD_BACSU Probable 3-hydroxybutyryl-CoA dehydrogenase OS=Bacillus subtilis
(strain 168) GN=mmgB PE=2 SV=1
Length = 287
Score = 298 bits (762), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 148/283 (52%), Positives = 189/283 (66%)
Query: 4 KMKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQ 63
++K + V G+GQMGSGIAQ G V + D +P+A K + + + KG+ ++
Sbjct: 2 EIKQIMVAGAGQMGSGIAQTAADAGFYVRMYDVNPEAAEAGLKRLKKQLARDAEKGKRTE 61
Query: 64 AMGTDAPRRLRCTSNLKDLHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSI 123
R+ + L++ ADI++EAI E+ K ++F LD+I ILASNTSS+
Sbjct: 62 TEVKSVINRISISQTLEEAEHADIVIEAIAENMAAKTEMFKTLDRICPPHTILASNTSSL 121
Query: 124 SITRLASATSRPCQVIGMHFMNPPPLMKLVEVIRGADTSDETFRATKALAERFGKTVVCS 183
IT +A+ T+RP +VIGMHFMNP P+MKLVEVIRG TS+ET ALAE+ GKT V
Sbjct: 122 PITEIAAVTNRPQRVIGMHFMNPVPVMKLVEVIRGLATSEETALDVMALAEKMGKTAVEV 181
Query: 184 QDYAGFIVNRILMPMINEAFFTLYTGVATKEDIDAGMKLGTNQPMGPLQLADFIGLDVCL 243
D+ GF+ NR+L+PMINEA + +Y GVA E ID MKLG N PMGPL LADFIGLD CL
Sbjct: 182 NDFPGFVSNRVLLPMINEAIYCVYEGVAKPEAIDEVMKLGMNHPMGPLALADFIGLDTCL 241
Query: 244 SIMKVLHTGLGDSKYAPCPLLVQYVDAGRLGKKRGIGVFDYRR 286
SIM+VLH+GLGDSKY PCPLL +YV AG LGKK G G +DY
Sbjct: 242 SIMEVLHSGLGDSKYRPCPLLRKYVKAGWLGKKSGRGFYDYEE 284
>sp|Q9RVG1|HBD_DEIRA Probable 3-hydroxybutyryl-CoA dehydrogenase OS=Deinococcus
radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 /
LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
GN=hbd PE=3 SV=1
Length = 278
Score = 295 bits (756), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 153/281 (54%), Positives = 185/281 (65%), Gaps = 9/281 (3%)
Query: 8 MGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGT 67
GV+G+GQMG GIAQ+ G DV + D + L R I S+ K KG+L T
Sbjct: 3 FGVIGAGQMGGGIAQVAAQSGFDVVVHDQKQEFLDRGKGVIEKSLGKLHEKGKL-----T 57
Query: 68 DAPR----RLRCTSNLKDLHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSI 123
DAP R+ T++L+D D++VEAIVE++ +K LF +L +I K ILASNTSSI
Sbjct: 58 DAPETVLGRIHFTTDLQDFADCDLVVEAIVENQQIKNDLFKQLGQIVKPEGILASNTSSI 117
Query: 124 SITRLASATSRPCQVIGMHFMNPPPLMKLVEVIRGADTSDETFRATKALAERFGKTVVCS 183
IT LA+A+ RP Q IGMHFMNP PLM+LVEVIRG TSDET R AE+ GKT +
Sbjct: 118 PITALATASGRPAQFIGMHFMNPVPLMQLVEVIRGYQTSDETARIVTETAEKLGKTPLSC 177
Query: 184 QDYAGFIVNRILMPMINEAFFTLYTGVATKEDIDAGMKLGTNQPMGPLQLADFIGLDVCL 243
D+ GF+ NRILMPM+NEA + GVA E ID MKLG N PMGPL LADFIGLD CL
Sbjct: 178 NDFPGFVSNRILMPMLNEAIQCVMEGVAEPEAIDGIMKLGMNHPMGPLTLADFIGLDTCL 237
Query: 244 SIMKVLHTGLGDSKYAPCPLLVQYVDAGRLGKKRGIGVFDY 284
+IM+VLH GLGD KY P PLL + V AG LG+K G G + Y
Sbjct: 238 AIMEVLHQGLGDDKYRPSPLLRKMVQAGLLGRKSGEGFYKY 278
>sp|P77851|HBD_THETC 3-hydroxybutyryl-CoA dehydrogenase OS=Thermoanaerobacterium
thermosaccharolyticum (strain ATCC 7956 / DSM 571 / NCIB
9385 / NCA 3814) GN=hbd PE=3 SV=2
Length = 281
Score = 285 bits (729), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 144/281 (51%), Positives = 193/281 (68%)
Query: 5 MKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQA 64
M+ + V+G+G MGSGIAQ+ +G +V L D D + + +I ++Q+ V KG+++
Sbjct: 1 MQKICVIGAGTMGSGIAQVFAQNGFEVILRDIDMKFVEKGFGTIEKNLQRNVDKGKITAD 60
Query: 65 MGTDAPRRLRCTSNLKDLHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSIS 124
+ R+R T+NL+D AD +VEA +E+ D+KK++F ELD+I K ILASNTSS+S
Sbjct: 61 EKNEILSRIRGTTNLEDAKEADFVVEAAIENMDLKKQIFKELDEICKMETILASNTSSLS 120
Query: 125 ITRLASATSRPCQVIGMHFMNPPPLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQ 184
IT +ASAT RP +VIGMHF NP P+MKLVEVI+G TS++TF + LA + KT + +
Sbjct: 121 ITEIASATKRPEKVIGMHFFNPVPVMKLVEVIKGLKTSEQTFNVVRELALKVDKTPIEVK 180
Query: 185 DYAGFIVNRILMPMINEAFFTLYTGVATKEDIDAGMKLGTNQPMGPLQLADFIGLDVCLS 244
+ GF+VNRIL+PMINEA L GVAT EDID MKLG N P+GPL L+D IG DV L+
Sbjct: 181 EAPGFVVNRILIPMINEAIGILADGVATAEDIDEAMKLGANHPIGPLALSDLIGNDVVLA 240
Query: 245 IMKVLHTGLGDSKYAPCPLLVQYVDAGRLGKKRGIGVFDYR 285
IM VL+ GDSKY P PLL + V G LG+K G G F+Y+
Sbjct: 241 IMNVLYEEYGDSKYRPHPLLKKMVRGGLLGRKTGKGFFEYK 281
>sp|P52041|HBD_CLOAB 3-hydroxybutyryl-CoA dehydrogenase OS=Clostridium acetobutylicum
(strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM
B-1787) GN=hbd PE=3 SV=2
Length = 282
Score = 281 bits (718), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 146/282 (51%), Positives = 188/282 (66%)
Query: 5 MKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQA 64
MK + V+G+G MGSGIAQ G +V L D + + R I+ ++ K V KG++ +A
Sbjct: 1 MKKVCVIGAGTMGSGIAQAFAAKGFEVVLRDIKDEFVDRGLDFINKNLSKLVKKGKIEEA 60
Query: 65 MGTDAPRRLRCTSNLKDLHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSIS 124
+ R+ T +L D+++EA VE D+KK++F++LD I K ILASNTSS+S
Sbjct: 61 TKVEILTRISGTVDLNMAADCDLVIEAAVERMDIKKQIFADLDNICKPETILASNTSSLS 120
Query: 125 ITRLASATSRPCQVIGMHFMNPPPLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQ 184
IT +ASAT RP +VIGMHF NP P+MKLVEVIRG TS ETF A K + GK V
Sbjct: 121 ITEVASATKRPDKVIGMHFFNPAPVMKLVEVIRGIATSQETFDAVKETSIAIGKDPVEVA 180
Query: 185 DYAGFIVNRILMPMINEAFFTLYTGVATKEDIDAGMKLGTNQPMGPLQLADFIGLDVCLS 244
+ GF+VNRIL+PMINEA L G+A+ EDID MKLG N PMGPL+L DFIGLD+CL+
Sbjct: 181 EAPGFVVNRILIPMINEAVGILAEGIASVEDIDKAMKLGANHPMGPLELGDFIGLDICLA 240
Query: 245 IMKVLHTGLGDSKYAPCPLLVQYVDAGRLGKKRGIGVFDYRR 286
IM VL++ GDSKY P LL +YV AG LG+K G G +DY +
Sbjct: 241 IMDVLYSETGDSKYRPHTLLKKYVRAGWLGRKSGKGFYDYSK 282
>sp|P45364|HBD_CLODI 3-hydroxybutyryl-CoA dehydrogenase OS=Clostridium difficile GN=hbd
PE=3 SV=1
Length = 281
Score = 254 bits (649), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 176/279 (63%)
Query: 8 MGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGT 67
+ V+GSG MGSGI Q G DV L A+ + + ++ K V+KG+ +A
Sbjct: 3 LAVIGSGTMGSGIVQTFASCGHDVCLKSRTQGAIDKCLALLDKNLTKLVTKGKWMKATKA 62
Query: 68 DAPRRLRCTSNLKDLHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITR 127
+ + T+N +DL D+I+EA VE ++KK +F LD++ K ILA+NTSS+SIT
Sbjct: 63 EILSHVSSTTNYEDLKDMDLIIEASVEDMNIKKDVFKLLDELCKEDTILATNTSSLSITE 122
Query: 128 LASATSRPCQVIGMHFMNPPPLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQDYA 187
+AS+T RP +VIGMHF NP P+MKLVEVI G TS TF L++ K V +
Sbjct: 123 IASSTKRPDKVIGMHFFNPVPMMKLVEVISGQLTSKVTFDTVFELSKSINKVPVDVSESP 182
Query: 188 GFIVNRILMPMINEAFFTLYTGVATKEDIDAGMKLGTNQPMGPLQLADFIGLDVCLSIMK 247
GF+VNRIL+PMINEA GVA+KE+ID MKLG N PMGPL L D IGLDV L+IM
Sbjct: 183 GFVVNRILIPMINEAVGIYADGVASKEEIDEAMKLGANHPMGPLALGDLIGLDVVLAIMN 242
Query: 248 VLHTGLGDSKYAPCPLLVQYVDAGRLGKKRGIGVFDYRR 286
VL+T GD+KY PLL + V A +LG+K IG +DY +
Sbjct: 243 VLYTEFGDTKYTAHPLLAKMVRANQLGRKTKIGFYDYNK 281
>sp|P41938|HCDH2_CAEEL Probable 3-hydroxyacyl-CoA dehydrogenase B0272.3 OS=Caenorhabditis
elegans GN=B0272.3 PE=1 SV=1
Length = 309
Score = 209 bits (531), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 110/289 (38%), Positives = 172/289 (59%), Gaps = 7/289 (2%)
Query: 4 KMKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQ 63
K+ + ++G+G MGSGIAQ+ L+V +VD++ AL +A + I++S+++ K
Sbjct: 21 KINNVTIIGAGLMGSGIAQVSANAKLNVTVVDSNQSALEKAQQGIANSLKRVAKKKHADD 80
Query: 64 AMGTDAP-----RRLRCTSNLKD-LHSADIIVEAIVESEDVKKKLFSELDKITKASAILA 117
A A R++ ++N+ D + AD+++EAIVE+ D+K+KLF+E++ K + ++
Sbjct: 81 AAAQTALVSSVLDRIKMSTNVSDSVKDADLVIEAIVENIDIKRKLFAEVEVAAKPTTLIT 140
Query: 118 SNTSSISITRLASATSRPCQVIGMHFMNPPPLMKLVEVIRGADTSDETFRATKALAERFG 177
+NTSS+ + + + G+HF NP P+MKL+EV+R +TSD TF + G
Sbjct: 141 TNTSSLRLADIGLNLKDKSRFGGLHFFNPVPMMKLLEVVRHTETSDATFNQLVDYGKTVG 200
Query: 178 KTVVCSQDYAGFIVNRILMPMINEAFFTLYTGVATKEDIDAGMKLGTNQPMGPLQLADFI 237
KT V +D GFIVNR+L+P + EA G A+ EDID MKLG PMGP +L+D++
Sbjct: 201 KTTVACKDTPGFIVNRLLVPYMFEALRLYERGDASMEDIDVAMKLGAGYPMGPFELSDYV 260
Query: 238 GLDVCLSIMKVLHTGLGDS-KYAPCPLLVQYVDAGRLGKKRGIGVFDYR 285
GLD C IM H + + P PLL VD+G+ G+K G G + Y+
Sbjct: 261 GLDTCKFIMDGWHAQYPEEVAFTPSPLLNSLVDSGKNGRKSGEGFYKYK 309
>sp|O53753|FADB2_MYCTU 3-hydroxybutyryl-CoA dehydrogenase OS=Mycobacterium tuberculosis
GN=fadB2 PE=1 SV=1
Length = 286
Score = 206 bits (525), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 114/287 (39%), Positives = 180/287 (62%), Gaps = 4/287 (1%)
Query: 1 MEEKMKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKS-ISSSIQKFVSKG 59
M + ++ +GVVG+GQMGSGIA++ G++V + + +AL+ A ++ I S+++ VS G
Sbjct: 1 MSDAIQRVGVVGAGQMGSGIAEVSARAGVEVTVFEP-AEALITAGRNRIVKSLERAVSAG 59
Query: 60 QLSQAMGTDAPRRLRCTSNLKDLHSADIIVEAIVESEDVKKKLFSELDKI-TKASAILAS 118
++++ A L T++L DL +++EA+VE E VK ++F+ELD++ T A+LAS
Sbjct: 60 KVTERERDRALGLLTFTTDLNDLSDRQLVIEAVVEDEAVKSEIFAELDRVVTDPDAVLAS 119
Query: 119 NTSSISITRLASATSRPCQVIGMHFMNPPPLMKLVEVIRGADTSDETFRATKALAER-FG 177
NTSSI I ++A+AT +P +V+G+HF NP P++ LVE++R T + T+ A G
Sbjct: 120 NTSSIPIMKVAAATKQPQRVLGLHFFNPVPVLPLVELVRTLVTDEAAAARTEEFASTVLG 179
Query: 178 KTVVCSQDYAGFIVNRILMPMINEAFFTLYTGVATKEDIDAGMKLGTNQPMGPLQLADFI 237
K VV D +GF+VN +L+P + A + G AT ED+D + G + PMGPL+L+D +
Sbjct: 180 KQVVRCSDRSGFVVNALLVPYLLSAIRMVEAGFATVEDVDKAVVAGLSHPMGPLRLSDLV 239
Query: 238 GLDVCLSIMKVLHTGLGDSKYAPCPLLVQYVDAGRLGKKRGIGVFDY 284
GLD I + + Y P PLL++ V+AG+LGKK G G + Y
Sbjct: 240 GLDTLKLIADKMFEEFKEPHYGPPPLLLRMVEAGQLGKKSGRGFYTY 286
>sp|Q61425|HCDH_MOUSE Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Mus musculus
GN=Hadh PE=1 SV=2
Length = 314
Score = 205 bits (522), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 161/288 (55%), Gaps = 7/288 (2%)
Query: 5 MKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQA 64
+K + V+G G MG+GIAQ+ G V LVD D L ++ K I S+++ K
Sbjct: 27 IKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLKRMAKKKFTENP 86
Query: 65 MGTD--APRRLRCTSNLKD----LHSADIIVEAIVESEDVKKKLFSELDKITKASAILAS 118
D + L C S D +HS D++VEAIVE+ +K +LF LDK I AS
Sbjct: 87 KAGDEFVEKTLSCLSTSTDAASVVHSTDLVVEAIVENLKLKNELFQRLDKFAAEHTIFAS 146
Query: 119 NTSSISITRLASATSRPCQVIGMHFMNPPPLMKLVEVIRGADTSDETFRATKALAERFGK 178
NTSS+ IT +A+AT+R + G+HF NP P+MKLVEVI+ TS +TF + + GK
Sbjct: 147 NTSSLQITNIANATTRQDRFAGLHFFNPVPMMKLVEVIKTPMTSQKTFESLVDFCKTLGK 206
Query: 179 TVVCSQDYAGFIVNRILMPMINEAFFTLYTGVATKEDIDAGMKLGTNQPMGPLQLADFIG 238
V +D GFIVNR+L+P + EA G A+KEDID MKLG PMGP +L D++G
Sbjct: 207 HPVSCKDTPGFIVNRLLVPYLIEAVRLHERGDASKEDIDTAMKLGAGYPMGPFELLDYVG 266
Query: 239 LDVCLSIMKVLHTGLGDSK-YAPCPLLVQYVDAGRLGKKRGIGVFDYR 285
LD I+ H ++ + P P + V +LGKK G G + Y+
Sbjct: 267 LDTTKFILDGWHEMEPENPLFQPSPSMNNLVAQKKLGKKTGEGFYKYK 314
>sp|Q16836|HCDH_HUMAN Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Homo sapiens
GN=HADH PE=1 SV=3
Length = 314
Score = 203 bits (516), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/289 (40%), Positives = 166/289 (57%), Gaps = 9/289 (3%)
Query: 5 MKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQA 64
+K + V+G G MG+GIAQ+ G V LVD D L ++ K I S++K V+K + ++
Sbjct: 27 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRK-VAKKKFAEN 85
Query: 65 MGTD---APRRLRCTSNLKD----LHSADIIVEAIVESEDVKKKLFSELDKITKASAILA 117
+ + L + D +HS D++VEAIVE+ VK +LF LDK I A
Sbjct: 86 LKAGDEFVEKTLSTIATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFA 145
Query: 118 SNTSSISITRLASATSRPCQVIGMHFMNPPPLMKLVEVIRGADTSDETFRATKALAERFG 177
SNTSS+ IT +A+AT+R + G+HF NP P+MKLVEVI+ TS +TF + ++ G
Sbjct: 146 SNTSSLQITSIANATTRQDRFAGLHFFNPVPVMKLVEVIKTPMTSQKTFESLVDFSKALG 205
Query: 178 KTVVCSQDYAGFIVNRILMPMINEAFFTLYTGVATKEDIDAGMKLGTNQPMGPLQLADFI 237
K V +D GFIVNR+L+P + EA G A+KEDID MKLG PMGP +L D++
Sbjct: 206 KHPVSCKDTPGFIVNRLLVPYLMEAIRLYERGDASKEDIDTAMKLGAGYPMGPFELLDYV 265
Query: 238 GLDVCLSIMKVLHTGLGDSK-YAPCPLLVQYVDAGRLGKKRGIGVFDYR 285
GLD I+ H ++ + P P L + V + GKK G G + Y+
Sbjct: 266 GLDTTKFIVDGWHEMDAENPLHQPSPSLNKLVAENKFGKKTGEGFYKYK 314
>sp|P00348|HCDH_PIG Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Sus scrofa
GN=HADH PE=1 SV=2
Length = 314
Score = 202 bits (514), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 161/290 (55%), Gaps = 11/290 (3%)
Query: 5 MKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQA 64
+K + V+G G MG+GIAQ+ G V LVD D L ++ K I S++K K
Sbjct: 27 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENP 86
Query: 65 MGTD--APRRLRCTSNLKD----LHSADIIVEAIVESEDVKKKLFSELDKITKASAILAS 118
D + L S D +HS D++VEAIVE+ VK +LF LDK I AS
Sbjct: 87 KAGDEFVEKTLSSISTSTDAASVVHSTDLVVEAIVENLKVKSELFKRLDKFAAEHTIFAS 146
Query: 119 NTSSISITRLASATSRPCQVIGMHFMNPPPLMKLVEVIRGADTSDETFRATKALAERFGK 178
NTSS+ IT LA+AT+R + G+HF NP PLMKLVEV++ TS +T + ++ GK
Sbjct: 147 NTSSLQITSLANATTRQDRFAGLHFFNPVPLMKLVEVVKTPMTSQKTLESLVDFSKTLGK 206
Query: 179 TVVCSQDYAGFIVNRILMPMINEAFFTLYTGVATKEDIDAGMKLGTNQPMGPLQLADFIG 238
V +D GFIVNR+L+P + EA G A+KEDID MKLG PMGP +L D++G
Sbjct: 207 HPVSCKDTPGFIVNRLLVPYLIEAVRLYERGDASKEDIDTAMKLGAGYPMGPFELLDYVG 266
Query: 239 LDVCLSIMKVLHTGLGDSK---YAPCPLLVQYVDAGRLGKKRGIGVFDYR 285
LD I+ H DS+ + P P + + V + GKK G G + Y+
Sbjct: 267 LDTTKFIIDGWHE--MDSQNPLFQPSPAMNKLVAENKFGKKTGEGFYKYK 314
>sp|Q9WVK7|HCDH_RAT Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus
norvegicus GN=Hadh PE=2 SV=1
Length = 314
Score = 202 bits (513), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 160/288 (55%), Gaps = 7/288 (2%)
Query: 5 MKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQA 64
+K + V+G G MG+GIAQ+ G V LVD D L ++ K I S+++ K
Sbjct: 27 IKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLKRMAKKKFTENP 86
Query: 65 MGTD--APRRLRCTSNLKD----LHSADIIVEAIVESEDVKKKLFSELDKITKASAILAS 118
D + L S D +HS D++VEAIVE+ +K +LF LDK I AS
Sbjct: 87 KAADEFVEKTLSSLSTSTDAASVVHSTDLVVEAIVENLKLKNELFQRLDKFAAEHTIFAS 146
Query: 119 NTSSISITRLASATSRPCQVIGMHFMNPPPLMKLVEVIRGADTSDETFRATKALAERFGK 178
NTSS+ IT +A+AT+R + G+HF NP P+MKLVEVI+ TS +TF + + GK
Sbjct: 147 NTSSLQITNIANATTRQDRFAGLHFFNPVPMMKLVEVIKTPMTSQKTFESLVDFCKTLGK 206
Query: 179 TVVCSQDYAGFIVNRILMPMINEAFFTLYTGVATKEDIDAGMKLGTNQPMGPLQLADFIG 238
V +D GFIVNR+L+P + EA G A+KEDID MKLG PMGP +L D++G
Sbjct: 207 HPVSCKDTPGFIVNRLLVPYLIEAIRLHERGDASKEDIDTAMKLGAGYPMGPFELLDYVG 266
Query: 239 LDVCLSIMKVLHTGLGDSK-YAPCPLLVQYVDAGRLGKKRGIGVFDYR 285
LD I+ H ++ + P P + V +LGKK G G + Y+
Sbjct: 267 LDTTKFILDGWHEMDPENPLFQPSPSMNNLVAQKKLGKKTGEGFYKYK 314
>sp|P76083|PAAH_ECOLI 3-hydroxyadipyl-CoA dehydrogenase OS=Escherichia coli (strain K12)
GN=paaH PE=1 SV=1
Length = 475
Score = 200 bits (509), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 110/289 (38%), Positives = 165/289 (57%), Gaps = 1/289 (0%)
Query: 4 KMKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQ 63
++ + V+GSG MG+GIA++ G V L D +AL RA I + + V++G+L+
Sbjct: 4 NVQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTA 63
Query: 64 AMGTDAPRRLRCTSNLKDLHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSI 123
+RL +++ L +AD+++EA E +VKK LF++L ++ +L +NTSSI
Sbjct: 64 ETCERTLKRLIPVTDIHALAAADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSI 123
Query: 124 SITRLASATSRPCQVIGMHFMNPPPLMKLVEVIRGADTSDETFRATKALAERFGKTVVCS 183
SIT +A+ P +V G+HF NP P+MKLVEV+ G T+ E L +GK V
Sbjct: 124 SITAIAAEIKNPERVAGLHFFNPAPVMKLVEVVSGLATAAEVVEQLCELTLSWGKQPVRC 183
Query: 184 QDYAGFIVNRILMPMINEAFFTLYTGVATKEDIDAGMKLGTNQPMGPLQLADFIGLDVCL 243
GFIVNR+ P +EA+ L VA E IDA ++ G PMGPL+L D IG DV
Sbjct: 184 HSTPGFIVNRVARPYYSEAWRALEEQVAAPEVIDAALRDGAGFPMGPLELTDLIGQDVNF 243
Query: 244 SIM-KVLHTGLGDSKYAPCPLLVQYVDAGRLGKKRGIGVFDYRRVPESV 291
++ V + + ++ P + + V GRLGKK G+GV+D+R E+V
Sbjct: 244 AVTCSVFNAFWQERRFLPSLVQQELVIGGRLGKKSGLGVYDWRAEREAV 292
Score = 81.6 bits (200), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 76/160 (47%), Gaps = 6/160 (3%)
Query: 107 DKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPPPLMKLVEVIRGADTSDETF 166
D +T+ +L T + LA +RP VI K+V + A D
Sbjct: 312 DGVTEIDDVLLIETQGETAQALAIRLARPVVVIDKM------AGKVVTIAAAAVNPDSAT 365
Query: 167 RATKALAERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLYTGVATKEDIDAGMKLGTNQ 226
R ++ GKTV+ DY G ++ R + +INEA L GVA+++DID M+LG N
Sbjct: 366 RKAIYYLQQQGKTVLQIADYPGMLIWRTVAMIINEALDALQKGVASEQDIDTAMRLGVNY 425
Query: 227 PMGPLQLADFIGLDVCLSIMKVLHTGLGDSKYAPCPLLVQ 266
P GPL +G L +++ L G+ +Y PC LL Q
Sbjct: 426 PYGPLAWGAQLGWQRILRLLENLQHHYGEERYRPCSLLRQ 465
>sp|P34439|HCDH1_CAEEL Probable 3-hydroxyacyl-CoA dehydrogenase F54C8.1 OS=Caenorhabditis
elegans GN=F54C8.1 PE=3 SV=1
Length = 298
Score = 197 bits (502), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 112/295 (37%), Positives = 167/295 (56%), Gaps = 16/295 (5%)
Query: 3 EKMKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLS 62
+ ++ + +VGSGQMGSGIAQ+ G +V L D + AL RA K+IS S+ K +
Sbjct: 9 QNIRNVAIVGSGQMGSGIAQVTASSGFNVMLADVNKKALDRAMKAISQSVTHLSKKQK-- 66
Query: 63 QAMGTDAPR---------RLRCTSNLKD-LHSADIIVEAIVESEDVKKKLFSELDKITKA 112
GTD + R++ +N+ + AD+I+EA +E+ D+K+ +F+++++ K
Sbjct: 67 ---GTDKEKSDFVTLTMSRIKTCNNVSTAVADADLIIEAAIENIDLKRGIFAQIEQSCKK 123
Query: 113 SAILASNTSSISITRLASATSRPCQVIGMHFMNPPPLMKLVEVIRGADTSDETFRATKAL 172
+IL +NTSS + +A + G+HF NP P+MKL+EVIR DTSDET+
Sbjct: 124 DSILTTNTSSFLLEDVAKGLQDKTRFGGLHFFNPVPVMKLLEVIRSDDTSDETYATLIKF 183
Query: 173 AERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLYTGVATKEDIDAGMKLGTNQPMGPLQ 232
GKT V +D GFIVNR+L+P EA G A+ DID MKLG PMGP +
Sbjct: 184 GTAVGKTTVACKDSPGFIVNRLLIPYFFEAARMYERGDASMTDIDEAMKLGAGHPMGPFE 243
Query: 233 LADFIGLDVCLSIMKVLHTGLGDSK-YAPCPLLVQYVDAGRLGKKRGIGVFDYRR 286
LAD+IGLD +M + + + PL+ + V G+LG+K G G + Y++
Sbjct: 244 LADYIGLDTVKFVMDGWAAKYPEVQLFEASPLVDKLVAEGKLGRKTGDGFYSYKK 298
>sp|A8A2L0|FADJ_ECOHS Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O9:H4 (strain HS) GN=fadJ PE=3 SV=1
Length = 714
Score = 162 bits (410), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/282 (35%), Positives = 156/282 (55%), Gaps = 5/282 (1%)
Query: 5 MKVMGVVGSGQMGSGIAQL-GVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQ 63
+ +G++G G MG+GIA + GL V + D +P + A K ++ V + L
Sbjct: 308 LNSVGILGGGLMGAGIAYVTACKAGLPVRIKDINPQGINHALKYSWDQLEGKVRRRHLKA 367
Query: 64 AMGTDAPRRLRCTSNLKDLHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSI 123
+ + T++ + D+I+EA+ E+ ++K+++ +E+++ A I ASNTSS+
Sbjct: 368 SERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSL 427
Query: 124 SITRLASATSRPCQVIGMHFMNPPPLMKLVEVIRGADTSDETFRATKALAERFGKTVVCS 183
I +A+ +RP QVIG+HF +P M LVE+I A TS +T T LA++ GKT +
Sbjct: 428 PIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVV 487
Query: 184 QDYAGFIVNRILMPMINEAFFTLYTGVATKEDIDAGM-KLGTNQPMGPLQLADFIGLDVC 242
+D AGF VNRIL P INEA L G E IDA + K G P+GP+QL D +G+D
Sbjct: 488 RDKAGFYVNRILAPYINEAIRMLTEGERV-EHIDAALVKFGF--PVGPIQLLDEVGIDTG 544
Query: 243 LSIMKVLHTGLGDSKYAPCPLLVQYVDAGRLGKKRGIGVFDY 284
I+ VL G+ AP ++ ++ R G+K G G + Y
Sbjct: 545 TKIIPVLEAAYGERFSAPANVVSSILNDDRKGRKNGRGFYLY 586
>sp|P07896|ECHP_RAT Peroxisomal bifunctional enzyme OS=Rattus norvegicus GN=Ehhadh PE=1
SV=2
Length = 722
Score = 162 bits (410), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/290 (36%), Positives = 162/290 (55%), Gaps = 20/290 (6%)
Query: 8 MGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGT 67
+GV+G G MG GIA G+ V V++DP L A K I+ +++K S+ Q
Sbjct: 299 VGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAH--QNGQA 356
Query: 68 DAPRRLRCTSNLKDLHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITR 127
A +LR +S+ K+L + D++VEA+ E ++KKK+F+EL + K A L +NTS++++
Sbjct: 357 SAKPKLRFSSSTKELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVDD 416
Query: 128 LASATSRPCQVIGMHFMNPPPLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQDYA 187
+AS+T RP VIG HF +P +M+L+EVI +S T +L+++ GK V +
Sbjct: 417 IASSTDRPQLVIGTHFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGVVVGNCY 476
Query: 188 GFIVNRILMPMINEAFFTLYTGVATKEDIDAGM-KLGTNQPMGPLQLADFIGLDVCLSIM 246
GF+ NR+L P N+ FF L G + ED+D + + G MGP +++D GLDV I
Sbjct: 477 GFVGNRMLAPYYNQGFFLLEEG-SKPEDVDGVLEEFGFK--MGPFRVSDLAGLDVGWKIR 533
Query: 247 K-------VLHTGL-----GDSKYAPCPLLVQYVDAGRLGKKRGIGVFDY 284
K L G G+S+Y+ PL +AGR G+K G G + Y
Sbjct: 534 KGQGLTGPSLPPGTPVRKRGNSRYS--PLGDMLCEAGRFGQKTGKGWYQY 581
>sp|Q9DBM2|ECHP_MOUSE Peroxisomal bifunctional enzyme OS=Mus musculus GN=Ehhadh PE=1 SV=4
Length = 718
Score = 162 bits (409), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 164/291 (56%), Gaps = 25/291 (8%)
Query: 8 MGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSK-GQLSQAMG 66
+GV+G G MG GIA G+ V V++DP L A K I+S+++K SK GQ S
Sbjct: 298 VGVLGLGTMGRGIAISFARVGIPVVAVESDPKQLDTAKKIITSTLEKEASKSGQAS---- 353
Query: 67 TDAPRRLRCTSNLKDLHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISIT 126
A LR +S+ K+L S D+++EA+ E ++KKK+F+EL + K A L +NTS++ +
Sbjct: 354 --AKPNLRFSSSTKELSSVDLVIEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALDVD 411
Query: 127 RLASATSRPCQVIGMHFMNPPPLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQDY 186
+AS+T RP VIG HF +P +M+L+EVI +S T +L++R GK V +
Sbjct: 412 DIASSTDRPQLVIGTHFFSPAHIMRLLEVIPSRYSSPTTIATVMSLSKRIGKIGVVVGNC 471
Query: 187 AGFIVNRILMPMINEAFFTLYTGVATKEDIDAGM-KLGTNQPMGPLQLADFIGLDVCLSI 245
GF+ NR+L P N+ +F + G + ED+D + + G MGP +++D GLDV +
Sbjct: 472 YGFVGNRMLAPYYNQGYFLIEEG-SKPEDVDGVLEEFGFR--MGPFRVSDLAGLDVGWKV 528
Query: 246 MK-------VLHTGL-----GDSKYAPCPLLVQYVDAGRLGKKRGIGVFDY 284
K L G G+++Y+P ++ +AGR G+K G G + Y
Sbjct: 529 RKGQGLTGPSLPPGTPTRKRGNTRYSPIADML--CEAGRFGQKTGKGWYQY 577
>sp|A5WH99|FADB_PSYWF Fatty acid oxidation complex subunit alpha OS=Psychrobacter sp.
(strain PRwf-1) GN=fadB PE=3 SV=1
Length = 719
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/261 (37%), Positives = 139/261 (53%), Gaps = 5/261 (1%)
Query: 28 GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHSADI 87
GL + + D + L S + K V + +++ A + R+R T N D DI
Sbjct: 338 GLPIIMKDIKSEQLDLGMGEASKLLGKMVERKKMTPAQMGETLSRIRPTLNYGDFGETDI 397
Query: 88 IVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPP 147
++EA+VE+ VK + E++ + K +AILASNTS+ISIT LA+ RP +GMHF NP
Sbjct: 398 VIEAVVENPKVKHAVLKEVEGLVKDNAILASNTSTISITYLATVLERPENFVGMHFFNPV 457
Query: 148 PLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLY 207
M LVEVIRG +S+E T ALA+R GK V D GF+VNR+L P AF L
Sbjct: 458 HRMPLVEVIRGEKSSEEAIATTVALAQRMGKVPVVVNDCPGFLVNRVLFPYFG-AFDLLL 516
Query: 208 TGVATKEDIDAGM-KLGTNQPMGPLQLADFIGLDVCLSIMKVLHTGLGDSKYAPCPLLVQ 266
A +D M K G PMGP L D +GLD + +V+ G D ++
Sbjct: 517 KQGADFVHVDKVMEKFG--WPMGPAYLIDVVGLDTGVHGAEVMAEGFPDRMKPDYKGAIK 574
Query: 267 YV-DAGRLGKKRGIGVFDYRR 286
++ + RLG+K G+G + Y +
Sbjct: 575 HLFENNRLGQKNGVGFYKYEK 595
>sp|Q1Q8J9|FADB_PSYCK Fatty acid oxidation complex subunit alpha OS=Psychrobacter
cryohalolentis (strain K5) GN=fadB PE=3 SV=1
Length = 719
Score = 156 bits (395), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/260 (37%), Positives = 138/260 (53%), Gaps = 5/260 (1%)
Query: 28 GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHSADI 87
GL + + D + L S + K V +G+++ A + R+R T N D DI
Sbjct: 338 GLPIIMKDIKSEQLDLGMGEASKLLGKMVDRGKITPAKMGETLSRIRPTLNYGDFAETDI 397
Query: 88 IVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPP 147
++EA+VE+ +VK+ + E++ + K ILASNTS+ISIT LA A RP +GMHF NP
Sbjct: 398 VIEAVVENPNVKRAVLKEVEGLVKDDCILASNTSTISITFLAEALERPENFVGMHFFNPV 457
Query: 148 PLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLY 207
M LVEVIRG +S+E T ALA + GK V D GF+VNR+L P AF L
Sbjct: 458 NRMPLVEVIRGEKSSEEAISTTVALATKMGKVPVVVNDCPGFLVNRVLFPYFG-AFDLLL 516
Query: 208 TGVATKEDIDAGM-KLGTNQPMGPLQLADFIGLDVCLSIMKVLHTGLGDSKYAPCPLLVQ 266
A +D M K G PMGP L D +GLD + +V+ G D ++
Sbjct: 517 KQGADFAHVDKVMEKFG--WPMGPAYLIDVVGLDTGVHGAEVMAEGFPDRMKPDYKGAIE 574
Query: 267 YV-DAGRLGKKRGIGVFDYR 285
++ + RLG+K G+G + Y
Sbjct: 575 HLYENKRLGQKNGVGFYKYE 594
>sp|Q4FQC6|FADB_PSYA2 Fatty acid oxidation complex subunit alpha OS=Psychrobacter
arcticus (strain DSM 17307 / 273-4) GN=fadB PE=3 SV=1
Length = 719
Score = 155 bits (393), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/260 (37%), Positives = 137/260 (52%), Gaps = 5/260 (1%)
Query: 28 GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHSADI 87
GL + + D + L S + K V +G+++ A + R+R T N D DI
Sbjct: 338 GLPIIMKDIKSEQLDLGMGEASKLLGKMVDRGKMTPAKMGETLSRIRPTLNYGDFAETDI 397
Query: 88 IVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPP 147
++EA+VE+ +VK+ + E++ + K ILASNTS+ISIT LA A RP +GMHF NP
Sbjct: 398 VIEAVVENPNVKRAVLKEVEGLVKDDCILASNTSTISITFLAEALERPENFVGMHFFNPV 457
Query: 148 PLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLY 207
M LVEVIRG +S+E T ALA + GK V D GF+VNR+L P AF L
Sbjct: 458 HRMPLVEVIRGEKSSEEAIATTVALASKMGKVPVVVNDCPGFLVNRVLFPYFG-AFDLLL 516
Query: 208 TGVATKEDIDAGM-KLGTNQPMGPLQLADFIGLDVCLSIMKVLHTGLGDSKYAPCPLLVQ 266
A +D M K G PMGP L D +GLD + +V+ G D ++
Sbjct: 517 KQGADFAHVDKVMEKFG--WPMGPAYLIDVVGLDTGVHGAEVMAEGFPDRMKPDYKGAIE 574
Query: 267 YV-DAGRLGKKRGIGVFDYR 285
+ + RLG+K G+G + Y
Sbjct: 575 LLYENKRLGQKNGVGFYKYE 594
>sp|B7M6M2|FADJ_ECO8A Fatty acid oxidation complex subunit alpha OS=Escherichia coli O8
(strain IAI1) GN=fadJ PE=3 SV=1
Length = 714
Score = 152 bits (384), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 143/258 (55%), Gaps = 4/258 (1%)
Query: 28 GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHSADI 87
GL V + D +P + A K ++ V + L + + T++ + D+
Sbjct: 332 GLPVRIKDINPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDL 391
Query: 88 IVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPP 147
I+EA+ E+ ++K+++ +E+++ + A I ASNTSS+ I +A+ +RP QVIG+HF +P
Sbjct: 392 IIEAVFENLELKQQMVAEVEQNSAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPV 451
Query: 148 PLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLY 207
M LVE+I A TS +T T LA++ GKT + +D AGF VNRIL P INEA L
Sbjct: 452 EKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLT 511
Query: 208 TGVATKEDIDAGM-KLGTNQPMGPLQLADFIGLDVCLSIMKVLHTGLGDSKYAPCPLLVQ 266
G E IDA + K G P+GP+QL D +G+D I+ VL G+ AP ++
Sbjct: 512 EGERV-EHIDAALVKFGF--PVGPIQLLDEVGIDTGTKIIPVLEAAYGERFSAPANVVSS 568
Query: 267 YVDAGRLGKKRGIGVFDY 284
++ R G+K G G + Y
Sbjct: 569 ILNDDRKGRKNGRGFYLY 586
>sp|Q8FFG4|FADJ_ECOL6 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=fadJ PE=3
SV=1
Length = 714
Score = 152 bits (383), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 142/258 (55%), Gaps = 4/258 (1%)
Query: 28 GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHSADI 87
GL V + D +P + A K ++ V + L + + T++ + D+
Sbjct: 332 GLPVRIKDINPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDL 391
Query: 88 IVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPP 147
I+EA+ E+ ++K+++ +E+++ A I ASNTSS+ I +A+ +RP QVIG+HF +P
Sbjct: 392 IIEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIADIAAHAARPEQVIGLHFFSPV 451
Query: 148 PLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLY 207
M LVE+I A TS +T T LA++ GKT + +D AGF VNRIL P INEA L
Sbjct: 452 EKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLT 511
Query: 208 TGVATKEDIDAGM-KLGTNQPMGPLQLADFIGLDVCLSIMKVLHTGLGDSKYAPCPLLVQ 266
G E IDA + K G P+GP+QL D +G+D I+ VL G+ AP ++
Sbjct: 512 EGERV-EHIDAALVKFGF--PVGPIQLLDEVGIDTGTKIIPVLEAAYGERFSAPANVVSS 568
Query: 267 YVDAGRLGKKRGIGVFDY 284
++ R G+K G G + Y
Sbjct: 569 ILNDDRKGRKNGRGFYLY 586
>sp|Q5R5M8|ECHP_PONAB Peroxisomal bifunctional enzyme OS=Pongo abelii GN=EHHADH PE=2 SV=1
Length = 723
Score = 152 bits (383), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 103/290 (35%), Positives = 155/290 (53%), Gaps = 20/290 (6%)
Query: 8 MGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGT 67
+GVVG G MG GI + V VD+D + L A K I+S ++K SK Q S +
Sbjct: 300 VGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKMITSVLEKEASKMQQSGHPWS 359
Query: 68 DAPRRLRCTSNLKDLHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITR 127
RL TS++K+L D+++EA+ E +KK++F+EL I K A L +NTS++ +
Sbjct: 360 GPKPRL--TSSMKELGGVDLVIEAVFEEMSLKKQVFAELSAICKPEAFLCTNTSALDVDE 417
Query: 128 LASATSRPCQVIGMHFMNPPPLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQDYA 187
+AS+T RP VIG HF +P +MKL+EVI +S T L+++ K V +
Sbjct: 418 IASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQYSSPTTIATVMNLSKKIKKIGVVVGNCF 477
Query: 188 GFIVNRILMPMINEAFFTLYTGVATKEDIDAGM-KLGTNQPMGPLQLADFIGLDVCLSIM 246
GF+ NR+L P N+A+F L G + E++D + + G MGP +++D GLDV
Sbjct: 478 GFVGNRMLNPYYNQAYFLLEEG-SKPEEVDQVLEEFGFK--MGPFRVSDLAGLDVGWKSR 534
Query: 247 K-------VLHTGL-----GDSKYAPCPLLVQYVDAGRLGKKRGIGVFDY 284
K L G G+ +Y P P ++ + GR G+K G G + Y
Sbjct: 535 KGQGLTGPTLPPGTPARKRGNRRYCPIPDVL--CELGRFGQKTGKGWYQY 582
>sp|Q32DJ4|FADJ_SHIDS Fatty acid oxidation complex subunit alpha OS=Shigella dysenteriae
serotype 1 (strain Sd197) GN=fadJ PE=3 SV=1
Length = 714
Score = 151 bits (382), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 142/258 (55%), Gaps = 4/258 (1%)
Query: 28 GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHSADI 87
GL V + D +P + A K ++ V + L + + T++ + D+
Sbjct: 332 GLPVRIKDINPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDL 391
Query: 88 IVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPP 147
I+EA+ E+ ++K+++ +E+++ A I ASNTSS+ I +A+ +RP QVIG+HF +P
Sbjct: 392 IIEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPV 451
Query: 148 PLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLY 207
M LVE+I A TS +T T LA++ GKT + +D AGF VNRIL P INEA L
Sbjct: 452 EKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLT 511
Query: 208 TGVATKEDIDAGM-KLGTNQPMGPLQLADFIGLDVCLSIMKVLHTGLGDSKYAPCPLLVQ 266
G E IDA + K G P+GP+QL D +G+D I+ VL G+ AP ++
Sbjct: 512 EGERV-EHIDAALVKFGF--PVGPIQLLDEVGIDTGTKIIPVLEAAYGERFSAPANVVSS 568
Query: 267 YVDAGRLGKKRGIGVFDY 284
++ R G+K G G + Y
Sbjct: 569 ILNDDRKGRKNGRGFYLY 586
>sp|B1IXA5|FADJ_ECOLC Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain ATCC 8739 / DSM 1576 / Crooks) GN=fadJ PE=3 SV=1
Length = 714
Score = 151 bits (382), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 142/258 (55%), Gaps = 4/258 (1%)
Query: 28 GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHSADI 87
GL V + D +P + A K ++ V + L + + T++ + D+
Sbjct: 332 GLPVRIKDINPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDL 391
Query: 88 IVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPP 147
I+EA+ E+ ++K+++ +E+++ A I ASNTSS+ I +A+ +RP QVIG+HF +P
Sbjct: 392 IIEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPV 451
Query: 148 PLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLY 207
M LVE+I A TS +T T LA++ GKT + +D AGF VNRIL P INEA L
Sbjct: 452 EKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLT 511
Query: 208 TGVATKEDIDAGM-KLGTNQPMGPLQLADFIGLDVCLSIMKVLHTGLGDSKYAPCPLLVQ 266
G E IDA + K G P+GP+QL D +G+D I+ VL G+ AP ++
Sbjct: 512 EGERV-EHIDAALVKFGF--PVGPIQLLDEVGIDTGTKIIPVLEAAYGERFSAPANVVSS 568
Query: 267 YVDAGRLGKKRGIGVFDY 284
++ R G+K G G + Y
Sbjct: 569 ILNDDRKGRKNGRGFYLY 586
>sp|Q3YZM2|FADJ_SHISS Fatty acid oxidation complex subunit alpha OS=Shigella sonnei
(strain Ss046) GN=fadJ PE=3 SV=1
Length = 714
Score = 151 bits (382), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 142/258 (55%), Gaps = 4/258 (1%)
Query: 28 GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHSADI 87
GL V + D +P + A K ++ V + L + + T++ + D+
Sbjct: 332 GLPVRIKDINPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDL 391
Query: 88 IVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPP 147
I+EA+ E+ ++K+++ +E+++ A I ASNTSS+ I +A+ +RP QVIG+HF +P
Sbjct: 392 IIEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPV 451
Query: 148 PLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLY 207
M LVE+I A TS +T T LA++ GKT + +D AGF VNRIL P INEA L
Sbjct: 452 EKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLT 511
Query: 208 TGVATKEDIDAGM-KLGTNQPMGPLQLADFIGLDVCLSIMKVLHTGLGDSKYAPCPLLVQ 266
G E IDA + K G P+GP+QL D +G+D I+ VL G+ AP ++
Sbjct: 512 EGERV-EHIDAALVKFGF--PVGPIQLLDEVGIDTGTKIIPVLEAAYGERFSAPANVVSS 568
Query: 267 YVDAGRLGKKRGIGVFDY 284
++ R G+K G G + Y
Sbjct: 569 ILNDDRKGRKNGRGFYLY 586
>sp|Q83QQ0|FADJ_SHIFL Fatty acid oxidation complex subunit alpha OS=Shigella flexneri
GN=fadJ PE=3 SV=1
Length = 714
Score = 151 bits (382), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 142/258 (55%), Gaps = 4/258 (1%)
Query: 28 GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHSADI 87
GL V + D +P + A K ++ V + L + + T++ + D+
Sbjct: 332 GLPVRIKDINPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDL 391
Query: 88 IVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPP 147
I+EA+ E+ ++K+++ +E+++ A I ASNTSS+ I +A+ +RP QVIG+HF +P
Sbjct: 392 IIEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPV 451
Query: 148 PLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLY 207
M LVE+I A TS +T T LA++ GKT + +D AGF VNRIL P INEA L
Sbjct: 452 EKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLT 511
Query: 208 TGVATKEDIDAGM-KLGTNQPMGPLQLADFIGLDVCLSIMKVLHTGLGDSKYAPCPLLVQ 266
G E IDA + K G P+GP+QL D +G+D I+ VL G+ AP ++
Sbjct: 512 EGERV-EHIDAALVKFGF--PVGPIQLLDEVGIDTGTKIIPVLEAAYGERFSAPANVVSS 568
Query: 267 YVDAGRLGKKRGIGVFDY 284
++ R G+K G G + Y
Sbjct: 569 ILNDDRKGRKNGRGFYLY 586
>sp|Q0T2E6|FADJ_SHIF8 Fatty acid oxidation complex subunit alpha OS=Shigella flexneri
serotype 5b (strain 8401) GN=fadJ PE=3 SV=1
Length = 714
Score = 151 bits (382), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 142/258 (55%), Gaps = 4/258 (1%)
Query: 28 GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHSADI 87
GL V + D +P + A K ++ V + L + + T++ + D+
Sbjct: 332 GLPVRIKDINPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDL 391
Query: 88 IVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPP 147
I+EA+ E+ ++K+++ +E+++ A I ASNTSS+ I +A+ +RP QVIG+HF +P
Sbjct: 392 IIEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPV 451
Query: 148 PLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLY 207
M LVE+I A TS +T T LA++ GKT + +D AGF VNRIL P INEA L
Sbjct: 452 EKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLT 511
Query: 208 TGVATKEDIDAGM-KLGTNQPMGPLQLADFIGLDVCLSIMKVLHTGLGDSKYAPCPLLVQ 266
G E IDA + K G P+GP+QL D +G+D I+ VL G+ AP ++
Sbjct: 512 EGERV-EHIDAALVKFGF--PVGPIQLLDEVGIDTGTKIIPVLEAAYGERFSAPANVVSS 568
Query: 267 YVDAGRLGKKRGIGVFDY 284
++ R G+K G G + Y
Sbjct: 569 ILNDDRKGRKNGRGFYLY 586
>sp|B7N5V2|FADJ_ECOLU Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O17:K52:H18 (strain UMN026 / ExPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 151 bits (382), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 142/258 (55%), Gaps = 4/258 (1%)
Query: 28 GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHSADI 87
GL V + D +P + A K ++ V + L + + T++ + D+
Sbjct: 332 GLPVRIKDINPQGINHALKYSWDQLEGKVRRRHLKASERDRQLALISGTTDYRGFAHRDL 391
Query: 88 IVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPP 147
I+EA+ E+ ++K+++ +E+++ A I ASNTSS+ I +A+ +RP QVIG+HF +P
Sbjct: 392 IIEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPV 451
Query: 148 PLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLY 207
M LVE+I A TS +T T LA++ GKT + +D AGF VNRIL P INEA L
Sbjct: 452 EKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLT 511
Query: 208 TGVATKEDIDAGM-KLGTNQPMGPLQLADFIGLDVCLSIMKVLHTGLGDSKYAPCPLLVQ 266
G E IDA + K G P+GP+QL D +G+D I+ VL G+ AP ++
Sbjct: 512 EGERV-EHIDAALVKFGF--PVGPIQLLDEVGIDTGTKIIPVLEAAYGERFSAPANVVSS 568
Query: 267 YVDAGRLGKKRGIGVFDY 284
++ R G+K G G + Y
Sbjct: 569 ILNDDRKGRKNGRGFYLY 586
>sp|Q31YB7|FADJ_SHIBS Fatty acid oxidation complex subunit alpha OS=Shigella boydii
serotype 4 (strain Sb227) GN=fadJ PE=3 SV=1
Length = 714
Score = 151 bits (382), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 142/258 (55%), Gaps = 4/258 (1%)
Query: 28 GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHSADI 87
GL V + D +P + A K ++ V + L + + T++ + D+
Sbjct: 332 GLPVRIKDINPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDL 391
Query: 88 IVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPP 147
I+EA+ E+ ++K+++ +E+++ A I ASNTSS+ I +A+ +RP QVIG+HF +P
Sbjct: 392 IIEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPV 451
Query: 148 PLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLY 207
M LVE+I A TS +T T LA++ GKT + +D AGF VNRIL P INEA L
Sbjct: 452 EKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLT 511
Query: 208 TGVATKEDIDAGM-KLGTNQPMGPLQLADFIGLDVCLSIMKVLHTGLGDSKYAPCPLLVQ 266
G E IDA + K G P+GP+QL D +G+D I+ VL G+ AP ++
Sbjct: 512 KGERV-EHIDAALVKFGF--PVGPIQLLDEVGIDTGTKIIPVLEAAYGERFSAPANVVSS 568
Query: 267 YVDAGRLGKKRGIGVFDY 284
++ R G+K G G + Y
Sbjct: 569 ILNDDRKGRKNGRGFYLY 586
>sp|A7ZPF8|FADJ_ECO24 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O139:H28 (strain E24377A / ETEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 151 bits (381), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 142/258 (55%), Gaps = 4/258 (1%)
Query: 28 GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHSADI 87
GL V + D +P + A K ++ V + L + + T++ + D+
Sbjct: 332 GLPVRIKDINPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDL 391
Query: 88 IVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPP 147
I+EA+ E+ ++K+++ +E+++ A I ASNTSS+ I +A+ +RP QVIG+HF +P
Sbjct: 392 IIEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPV 451
Query: 148 PLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLY 207
M LVE+I A TS +T T LA++ GKT + +D AGF VNRIL P INEA L
Sbjct: 452 EKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLT 511
Query: 208 TGVATKEDIDAGM-KLGTNQPMGPLQLADFIGLDVCLSIMKVLHTGLGDSKYAPCPLLVQ 266
G E IDA + K G P+GP+QL D +G+D I+ VL G+ AP ++
Sbjct: 512 EGERV-EHIDAALVKFGF--PVGPIQLLDEVGIDTGTKIIPVLEAAYGERFSAPANVVSS 568
Query: 267 YVDAGRLGKKRGIGVFDY 284
++ R G+K G G + Y
Sbjct: 569 ILNDDRKGRKNGRGFYLY 586
>sp|B2TWV4|FADJ_SHIB3 Fatty acid oxidation complex subunit alpha OS=Shigella boydii
serotype 18 (strain CDC 3083-94 / BS512) GN=fadJ PE=3
SV=1
Length = 714
Score = 151 bits (381), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 142/258 (55%), Gaps = 4/258 (1%)
Query: 28 GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHSADI 87
GL V + D +P + A K ++ V + L + + T++ + D+
Sbjct: 332 GLPVRIKDINPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDL 391
Query: 88 IVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPP 147
I+EA+ E+ ++K+++ +E+++ A I ASNTSS+ I +A+ +RP QVIG+HF +P
Sbjct: 392 IIEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPV 451
Query: 148 PLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLY 207
M LVE+I A TS +T T LA++ GKT + +D AGF VNRIL P INEA L
Sbjct: 452 EKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLT 511
Query: 208 TGVATKEDIDAGM-KLGTNQPMGPLQLADFIGLDVCLSIMKVLHTGLGDSKYAPCPLLVQ 266
G E IDA + K G P+GP+QL D +G+D I+ VL G+ AP ++
Sbjct: 512 KGERV-EHIDAALVKFGF--PVGPIQLLDEVGIDTGTKIIPVLEAAYGERFSAPANVVSS 568
Query: 267 YVDAGRLGKKRGIGVFDY 284
++ R G+K G G + Y
Sbjct: 569 ILNDDRKGRKNGRGFYLY 586
>sp|B6I6Q4|FADJ_ECOSE Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain SE11) GN=fadJ PE=3 SV=1
Length = 714
Score = 151 bits (381), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 142/258 (55%), Gaps = 4/258 (1%)
Query: 28 GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHSADI 87
GL V + D +P + A K ++ V + L + + T++ + D+
Sbjct: 332 GLPVRIKDINPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDL 391
Query: 88 IVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPP 147
I+EA+ E+ ++K+++ +E+++ A I ASNTSS+ I +A+ +RP QVIG+HF +P
Sbjct: 392 IIEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPV 451
Query: 148 PLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLY 207
M LVE+I A TS +T T LA++ GKT + +D AGF VNRIL P INEA L
Sbjct: 452 EKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLT 511
Query: 208 TGVATKEDIDAGM-KLGTNQPMGPLQLADFIGLDVCLSIMKVLHTGLGDSKYAPCPLLVQ 266
G E IDA + K G P+GP+QL D +G+D I+ VL G+ AP ++
Sbjct: 512 EGERV-EHIDAALVKFGF--PVGPIQLLDEVGIDTGTKIIPVLEAAYGERFSAPANVVSS 568
Query: 267 YVDAGRLGKKRGIGVFDY 284
++ R G+K G G + Y
Sbjct: 569 ILNDDRKGRKNGRGFYLY 586
>sp|B7LBJ5|FADJ_ECO55 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain 55989 / EAEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 150 bits (380), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 143/258 (55%), Gaps = 4/258 (1%)
Query: 28 GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHSADI 87
GL V + D +P + A K ++ V + L + + T++ + D+
Sbjct: 332 GLPVRIKDINPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDL 391
Query: 88 IVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPP 147
I+EA+ E+ ++K+++ +E+++ + A I ASNTSS+ I +A+ +RP QVIG+HF +P
Sbjct: 392 IIEAVFENLELKQQMVAEVEQNSAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPV 451
Query: 148 PLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLY 207
M LVE+I A TS +T T LA++ GKT + +D AGF VNRIL P INEA L
Sbjct: 452 EKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLT 511
Query: 208 TGVATKEDIDAGM-KLGTNQPMGPLQLADFIGLDVCLSIMKVLHTGLGDSKYAPCPLLVQ 266
G E IDA + K G P+GP+QL D +G+D I+ VL G+ AP ++
Sbjct: 512 EGERV-EHIDAVLVKFGF--PVGPIQLLDEVGIDTGTKIIPVLEAAYGERFSAPANVVSS 568
Query: 267 YVDAGRLGKKRGIGVFDY 284
++ R G+K G G + Y
Sbjct: 569 ILNDDRKGRKNGRGFYLY 586
>sp|B2I2J9|FADB_ACIBC Fatty acid oxidation complex subunit alpha OS=Acinetobacter
baumannii (strain ACICU) GN=fadB PE=3 SV=1
Length = 717
Score = 150 bits (380), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 139/260 (53%), Gaps = 5/260 (1%)
Query: 28 GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHSADI 87
G + + D L K ++ + K V + ++ A + R+R T + ++ DI
Sbjct: 338 GTPIIMKDIGNPQLALGMKEANNLLTKQVERKKMKPAQMGETLARIRPTLSYEEFKEVDI 397
Query: 88 IVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPP 147
++EA+ E+ VK+ + +E +K + + I+ASNTS+ISITRLA A RP +GMHF NP
Sbjct: 398 VIEAVTENPKVKEIVLAETEKNVRENTIIASNTSTISITRLAKALQRPENFVGMHFFNPV 457
Query: 148 PLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLY 207
+M LVEVIRG TS+E T LA++ GKT + D GF+VNR+L P AF L
Sbjct: 458 HMMPLVEVIRGEKTSEEAIATTVVLAQKMGKTPIVVNDCPGFLVNRVLFPYFG-AFDLLV 516
Query: 208 TGVATKEDIDAGM-KLGTNQPMGPLQLADFIGLDVCLSIMKVLHTGLGDSKYAPCPLLVQ 266
A + ID M K G PMGP L D +G+D + +V+ G D ++
Sbjct: 517 KDGADFQQIDNVMSKFG--WPMGPAYLIDVVGIDTGVHGAEVMAEGFPDRMKPDYKGAIE 574
Query: 267 YV-DAGRLGKKRGIGVFDYR 285
+ +A RLG+K +G + Y
Sbjct: 575 AMYEAKRLGQKNDVGFYKYE 594
>sp|P77399|FADJ_ECOLI Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain K12) GN=fadJ PE=1 SV=1
Length = 714
Score = 150 bits (380), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 92/258 (35%), Positives = 142/258 (55%), Gaps = 4/258 (1%)
Query: 28 GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHSADI 87
G+ V + D +P + A K ++ V + L + + T++ + D+
Sbjct: 332 GIPVRIKDINPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDL 391
Query: 88 IVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPP 147
I+EA+ E+ ++K+++ +E+++ A I ASNTSS+ I +A+ +RP QVIG+HF +P
Sbjct: 392 IIEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPV 451
Query: 148 PLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLY 207
M LVE+I A TS +T T LA++ GKT + +D AGF VNRIL P INEA L
Sbjct: 452 EKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLT 511
Query: 208 TGVATKEDIDAGM-KLGTNQPMGPLQLADFIGLDVCLSIMKVLHTGLGDSKYAPCPLLVQ 266
G E IDA + K G P+GP+QL D +G+D I+ VL G+ AP ++
Sbjct: 512 QGERV-EHIDAALVKFGF--PVGPIQLLDEVGIDTGTKIIPVLEAAYGERFSAPANVVSS 568
Query: 267 YVDAGRLGKKRGIGVFDY 284
++ R G+K G G + Y
Sbjct: 569 ILNDDRKGRKNGRGFYLY 586
>sp|B1X9L4|FADJ_ECODH Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain K12 / DH10B) GN=fadJ PE=3 SV=1
Length = 714
Score = 150 bits (380), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 92/258 (35%), Positives = 142/258 (55%), Gaps = 4/258 (1%)
Query: 28 GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHSADI 87
G+ V + D +P + A K ++ V + L + + T++ + D+
Sbjct: 332 GIPVRIKDINPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDL 391
Query: 88 IVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPP 147
I+EA+ E+ ++K+++ +E+++ A I ASNTSS+ I +A+ +RP QVIG+HF +P
Sbjct: 392 IIEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPV 451
Query: 148 PLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLY 207
M LVE+I A TS +T T LA++ GKT + +D AGF VNRIL P INEA L
Sbjct: 452 EKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLT 511
Query: 208 TGVATKEDIDAGM-KLGTNQPMGPLQLADFIGLDVCLSIMKVLHTGLGDSKYAPCPLLVQ 266
G E IDA + K G P+GP+QL D +G+D I+ VL G+ AP ++
Sbjct: 512 QGERV-EHIDAALVKFGF--PVGPIQLLDEVGIDTGTKIIPVLEAAYGERFSAPANVVSS 568
Query: 267 YVDAGRLGKKRGIGVFDY 284
++ R G+K G G + Y
Sbjct: 569 ILNDDRKGRKNGRGFYLY 586
>sp|C4ZVN2|FADJ_ECOBW Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain K12 / MC4100 / BW2952) GN=fadJ PE=3 SV=1
Length = 714
Score = 150 bits (380), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 92/258 (35%), Positives = 142/258 (55%), Gaps = 4/258 (1%)
Query: 28 GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHSADI 87
G+ V + D +P + A K ++ V + L + + T++ + D+
Sbjct: 332 GIPVRIKDINPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDL 391
Query: 88 IVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPP 147
I+EA+ E+ ++K+++ +E+++ A I ASNTSS+ I +A+ +RP QVIG+HF +P
Sbjct: 392 IIEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPV 451
Query: 148 PLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLY 207
M LVE+I A TS +T T LA++ GKT + +D AGF VNRIL P INEA L
Sbjct: 452 EKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLT 511
Query: 208 TGVATKEDIDAGM-KLGTNQPMGPLQLADFIGLDVCLSIMKVLHTGLGDSKYAPCPLLVQ 266
G E IDA + K G P+GP+QL D +G+D I+ VL G+ AP ++
Sbjct: 512 QGERV-EHIDAALVKFGF--PVGPIQLLDEVGIDTGTKIIPVLEAAYGERFSAPANVVSS 568
Query: 267 YVDAGRLGKKRGIGVFDY 284
++ R G+K G G + Y
Sbjct: 569 ILNDDRKGRKNGRGFYLY 586
>sp|B0VLX4|FADB_ACIBS Fatty acid oxidation complex subunit alpha OS=Acinetobacter
baumannii (strain SDF) GN=fadB PE=3 SV=1
Length = 717
Score = 150 bits (380), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 139/260 (53%), Gaps = 5/260 (1%)
Query: 28 GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHSADI 87
G + + D L K ++ + K V + ++ A + R+R T + ++ DI
Sbjct: 338 GTPIIMKDIGNPQLALGMKEANNLLTKQVERKKMKPAQMGETLARIRPTLSYEEFKEVDI 397
Query: 88 IVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPP 147
++EA+ E+ VK+ + +E +K + + I+ASNTS+ISITRLA A RP +GMHF NP
Sbjct: 398 VIEAVTENPKVKEIVLAETEKNVRENTIIASNTSTISITRLAKALQRPENFVGMHFFNPV 457
Query: 148 PLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLY 207
+M LVEVIRG TS+E T LA++ GKT + D GF+VNR+L P AF L
Sbjct: 458 HMMPLVEVIRGEKTSEEAIATTVVLAQKMGKTPIVVNDCPGFLVNRVLFPYFG-AFDLLV 516
Query: 208 TGVATKEDIDAGM-KLGTNQPMGPLQLADFIGLDVCLSIMKVLHTGLGDSKYAPCPLLVQ 266
A + ID M K G PMGP L D +G+D + +V+ G D ++
Sbjct: 517 KDGADFQQIDNVMSKFG--WPMGPAYLIDVVGIDTGVHGAEVMAEGFPDRMKPDYKGAIE 574
Query: 267 YV-DAGRLGKKRGIGVFDYR 285
+ +A RLG+K +G + Y
Sbjct: 575 AMYEAKRLGQKNDVGFYKYE 594
>sp|Q08426|ECHP_HUMAN Peroxisomal bifunctional enzyme OS=Homo sapiens GN=EHHADH PE=1 SV=3
Length = 723
Score = 150 bits (378), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/290 (35%), Positives = 155/290 (53%), Gaps = 20/290 (6%)
Query: 8 MGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGT 67
+GVVG G MG GI + V VD+D + L A K I+S ++K SK Q S +
Sbjct: 300 VGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKMITSVLEKEASKMQQSGHPWS 359
Query: 68 DAPRRLRCTSNLKDLHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITR 127
RL TS++K+L D+++EA+ E +KK++F+EL + K A L +NTS++ +
Sbjct: 360 GPKPRL--TSSVKELGGVDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDE 417
Query: 128 LASATSRPCQVIGMHFMNPPPLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQDYA 187
+AS+T RP VIG HF +P +MKL+EVI +S T L+++ K V +
Sbjct: 418 IASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQYSSPTTIATVMNLSKKIKKIGVVVGNCF 477
Query: 188 GFIVNRILMPMINEAFFTLYTGVATKEDIDAGM-KLGTNQPMGPLQLADFIGLDVCLSIM 246
GF+ NR+L P N+A+F L G + E++D + + G MGP +++D GLDV
Sbjct: 478 GFVGNRMLNPYYNQAYFLLEEG-SKPEEVDQVLEEFGFK--MGPFRVSDLAGLDVGWKSR 534
Query: 247 K-------VLHTGL-----GDSKYAPCPLLVQYVDAGRLGKKRGIGVFDY 284
K L G G+ +Y P P ++ + GR G+K G G + Y
Sbjct: 535 KGQGLTGPTLLPGTPARKRGNRRYCPIPDVL--CELGRFGQKTGKGWYQY 582
>sp|B0VE45|FADB_ACIBY Fatty acid oxidation complex subunit alpha OS=Acinetobacter
baumannii (strain AYE) GN=fadB PE=3 SV=1
Length = 717
Score = 149 bits (375), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 138/260 (53%), Gaps = 5/260 (1%)
Query: 28 GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHSADI 87
G + + D L K ++ + K V + ++ + R+R T + ++ DI
Sbjct: 338 GTPIIMKDIGNPQLALGMKEANNLLTKQVERKKMKPVQMGETLARIRPTLSYEEFKEVDI 397
Query: 88 IVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPP 147
++EA+ E+ VK+ + +E +K + + I+ASNTS+ISITRLA A RP +GMHF NP
Sbjct: 398 VIEAVTENPKVKEIVLAETEKNVRENTIIASNTSTISITRLAKALQRPENFVGMHFFNPV 457
Query: 148 PLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLY 207
+M LVEVIRG TS+E T LA++ GKT + D GF+VNR+L P AF L
Sbjct: 458 HMMPLVEVIRGEKTSEEAIATTVVLAQKMGKTPIVVNDCPGFLVNRVLFPYFG-AFDLLV 516
Query: 208 TGVATKEDIDAGM-KLGTNQPMGPLQLADFIGLDVCLSIMKVLHTGLGDSKYAPCPLLVQ 266
A + ID M K G PMGP L D +G+D + +V+ G D ++
Sbjct: 517 KDGADFQQIDNVMSKFG--WPMGPAYLIDVVGIDTGVHGAEVMAEGFPDRMKPDYKGAIE 574
Query: 267 YV-DAGRLGKKRGIGVFDYR 285
+ +A RLG+K +G + Y
Sbjct: 575 AMYEAKRLGQKNDVGFYKYE 594
>sp|B7I3P1|FADB_ACIB5 Fatty acid oxidation complex subunit alpha OS=Acinetobacter
baumannii (strain AB0057) GN=fadB PE=3 SV=1
Length = 717
Score = 149 bits (375), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 138/260 (53%), Gaps = 5/260 (1%)
Query: 28 GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHSADI 87
G + + D L K ++ + K V + ++ + R+R T + ++ DI
Sbjct: 338 GTPIIMKDIGNPQLALGMKEANNLLTKQVERKKMKPVQMGETLARIRPTLSYEEFKEVDI 397
Query: 88 IVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPP 147
++EA+ E+ VK+ + +E +K + + I+ASNTS+ISITRLA A RP +GMHF NP
Sbjct: 398 VIEAVTENPKVKEIVLAETEKNVRENTIIASNTSTISITRLAKALQRPENFVGMHFFNPV 457
Query: 148 PLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLY 207
+M LVEVIRG TS+E T LA++ GKT + D GF+VNR+L P AF L
Sbjct: 458 HMMPLVEVIRGEKTSEEAIATTVVLAQKMGKTPIVVNDCPGFLVNRVLFPYFG-AFDLLV 516
Query: 208 TGVATKEDIDAGM-KLGTNQPMGPLQLADFIGLDVCLSIMKVLHTGLGDSKYAPCPLLVQ 266
A + ID M K G PMGP L D +G+D + +V+ G D ++
Sbjct: 517 KDGADFQQIDNVMSKFG--WPMGPAYLIDVVGIDTGVHGAEVMAEGFPDRMKPDYKGAIE 574
Query: 267 YV-DAGRLGKKRGIGVFDYR 285
+ +A RLG+K +G + Y
Sbjct: 575 AMYEAKRLGQKNDVGFYKYE 594
>sp|B7H1I0|FADB_ACIB3 Fatty acid oxidation complex subunit alpha OS=Acinetobacter
baumannii (strain AB307-0294) GN=fadB PE=3 SV=1
Length = 717
Score = 149 bits (375), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 138/260 (53%), Gaps = 5/260 (1%)
Query: 28 GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHSADI 87
G + + D L K ++ + K V + ++ + R+R T + ++ DI
Sbjct: 338 GTPIIMKDIGNPQLALGMKEANNLLTKQVERKKMKPVQMGETLARIRPTLSYEEFKEVDI 397
Query: 88 IVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPP 147
++EA+ E+ VK+ + +E +K + + I+ASNTS+ISITRLA A RP +GMHF NP
Sbjct: 398 VIEAVTENPKVKEIVLAETEKNVRENTIIASNTSTISITRLAKALQRPENFVGMHFFNPV 457
Query: 148 PLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLY 207
+M LVEVIRG TS+E T LA++ GKT + D GF+VNR+L P AF L
Sbjct: 458 HMMPLVEVIRGEKTSEEAIATTVVLAQKMGKTPIVVNDCPGFLVNRVLFPYFG-AFDLLV 516
Query: 208 TGVATKEDIDAGM-KLGTNQPMGPLQLADFIGLDVCLSIMKVLHTGLGDSKYAPCPLLVQ 266
A + ID M K G PMGP L D +G+D + +V+ G D ++
Sbjct: 517 KDGADFQQIDNVMSKFG--WPMGPAYLIDVVGIDTGVHGAEVMAEGFPDRMKPDYKGAIE 574
Query: 267 YV-DAGRLGKKRGIGVFDYR 285
+ +A RLG+K +G + Y
Sbjct: 575 AMYEAKRLGQKNDVGFYKYE 594
>sp|Q1R972|FADJ_ECOUT Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain UTI89 / UPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 149 bits (375), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 140/258 (54%), Gaps = 4/258 (1%)
Query: 28 GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHSADI 87
GL V + D +P + A K ++ V + L + + T++ D+
Sbjct: 332 GLPVRIKDINPRGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYCGFAHRDL 391
Query: 88 IVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPP 147
I+EA+ E+ ++K+++ +E+++ I ASNTSS+ I +A+ +RP QVIG+HF +P
Sbjct: 392 IIEAVFENLELKQQMVAEVEQNCATHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPV 451
Query: 148 PLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLY 207
M LVE+I A TS +T T LA++ GKT + +D AGF VNRIL P INEA L
Sbjct: 452 EKMPLVEIIPHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLT 511
Query: 208 TGVATKEDIDAGM-KLGTNQPMGPLQLADFIGLDVCLSIMKVLHTGLGDSKYAPCPLLVQ 266
G E IDA + K G P+GP+QL D +G+D IM VL G+ AP ++
Sbjct: 512 EGERI-EHIDAALVKFGF--PVGPIQLLDEVGIDTGTKIMPVLEAAYGERFSAPANVVSS 568
Query: 267 YVDAGRLGKKRGIGVFDY 284
++ R G+K G G + Y
Sbjct: 569 ILNDDRKGRKNGRGFYLY 586
>sp|A1ADI8|FADJ_ECOK1 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O1:K1 / APEC GN=fadJ PE=3 SV=1
Length = 714
Score = 149 bits (375), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 140/258 (54%), Gaps = 4/258 (1%)
Query: 28 GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHSADI 87
GL V + D +P + A K ++ V + L + + T++ D+
Sbjct: 332 GLPVRIKDINPRGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYCGFAHRDL 391
Query: 88 IVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPP 147
I+EA+ E+ ++K+++ +E+++ I ASNTSS+ I +A+ +RP QVIG+HF +P
Sbjct: 392 IIEAVFENLELKQQMVAEVEQNCATHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPV 451
Query: 148 PLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLY 207
M LVE+I A TS +T T LA++ GKT + +D AGF VNRIL P INEA L
Sbjct: 452 EKMPLVEIIPHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLT 511
Query: 208 TGVATKEDIDAGM-KLGTNQPMGPLQLADFIGLDVCLSIMKVLHTGLGDSKYAPCPLLVQ 266
G E IDA + K G P+GP+QL D +G+D IM VL G+ AP ++
Sbjct: 512 EGERI-EHIDAALVKFGF--PVGPIQLLDEVGIDTGTKIMPVLEAAYGERFSAPANVVSS 568
Query: 267 YVDAGRLGKKRGIGVFDY 284
++ R G+K G G + Y
Sbjct: 569 ILNDDRKGRKNGRGFYLY 586
>sp|B7UFZ8|FADJ_ECO27 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O127:H6 (strain E2348/69 / EPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 148 bits (374), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 140/258 (54%), Gaps = 4/258 (1%)
Query: 28 GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHSADI 87
GL V + D +P + A K ++ V + L + + T++ D+
Sbjct: 332 GLPVRIKDINPRGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYCGFAHRDL 391
Query: 88 IVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPP 147
I+EA+ E+ ++K+++ +E+++ I ASNTSS+ I +A+ +RP QVIG+HF +P
Sbjct: 392 IIEAVFENLELKQQMVAEVEQNCATHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPV 451
Query: 148 PLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLY 207
M LVE+I A TS +T T LA++ GKT + +D AGF VNRIL P INEA L
Sbjct: 452 EKMPLVEIIPHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLT 511
Query: 208 TGVATKEDIDAGM-KLGTNQPMGPLQLADFIGLDVCLSIMKVLHTGLGDSKYAPCPLLVQ 266
G E IDA + K G P+GP+QL D +G+D IM VL G+ AP ++
Sbjct: 512 EGERI-EHIDAALVKFGF--PVGPIQLLDEVGIDTGTKIMPVLEAAYGERFSAPANVVSS 568
Query: 267 YVDAGRLGKKRGIGVFDY 284
++ R G+K G G + Y
Sbjct: 569 ILNDDRKGRKNGRGFYLY 586
>sp|B7MGV7|FADJ_ECO45 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O45:K1 (strain S88 / ExPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 148 bits (374), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 140/258 (54%), Gaps = 4/258 (1%)
Query: 28 GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHSADI 87
GL V + D +P + A K ++ V + L + + T++ D+
Sbjct: 332 GLPVRIKDINPRGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYCGFAHRDL 391
Query: 88 IVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPP 147
I+EA+ E+ ++K+++ +E+++ I ASNTSS+ I +A+ +RP QVIG+HF +P
Sbjct: 392 IIEAVFENLELKQQMVAEVEQNCATHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPV 451
Query: 148 PLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLY 207
M LVE+I A TS +T T LA++ GKT + +D AGF VNRIL P INEA L
Sbjct: 452 EKMPLVEIIPHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLT 511
Query: 208 TGVATKEDIDAGM-KLGTNQPMGPLQLADFIGLDVCLSIMKVLHTGLGDSKYAPCPLLVQ 266
G E IDA + K G P+GP+QL D +G+D IM VL G+ AP ++
Sbjct: 512 EGERI-EHIDAALVKFGF--PVGPIQLLDEVGIDTGTKIMPVLEAAYGERFSAPANVVSS 568
Query: 267 YVDAGRLGKKRGIGVFDY 284
++ R G+K G G + Y
Sbjct: 569 ILNDDRKGRKNGRGFYLY 586
>sp|B7LLD0|FADJ_ESCF3 Fatty acid oxidation complex subunit alpha OS=Escherichia
fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73)
GN=fadJ PE=3 SV=1
Length = 714
Score = 148 bits (374), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 143/272 (52%), Gaps = 8/272 (2%)
Query: 28 GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHSADI 87
GL V + D +P + A K + V + + ++ T++ + D+
Sbjct: 332 GLPVRIKDINPQGINHALKYSWQLLDAKVRRRHIKAGEQARQLAKISGTTDYQGFAHRDV 391
Query: 88 IVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPP 147
++EA+ E +K+++ +E++K I ASNTSSI I+ +A+ +RP QVIG+HF +P
Sbjct: 392 VIEAVFEDLSLKQQMVAEVEKNCGLHTIFASNTSSIPISDIAAHATRPEQVIGLHFFSPV 451
Query: 148 PLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLY 207
M LVEVI A TS++T LA++ GKT + QD AGF VNRIL P INEA L
Sbjct: 452 EKMPLVEVIPHAATSEKTIATIVKLAKKQGKTPIVVQDKAGFYVNRILAPYINEAIRLLT 511
Query: 208 TGVATKEDIDAGM-KLGTNQPMGPLQLADFIGLDVCLSIMKVLHTGLGDSKYAPCPLLVQ 266
G E ID + K G P+GP+QL D +G+D I+ VL G+ AP ++
Sbjct: 512 EGEKV-ETIDTALVKFGF--PVGPIQLLDEVGIDTGTKIIPVLEAAYGERFSAPANVVSS 568
Query: 267 YVDAGRLGKKRGIGVFDY----RRVPESVKPN 294
++ R G+K G G + Y R+ + V P
Sbjct: 569 ILNDDRKGRKNGRGFYLYGAKGRKSKKQVDPE 600
>sp|Q8XCP2|FADJ_ECO57 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O157:H7 GN=fadJ PE=3 SV=1
Length = 714
Score = 148 bits (374), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 141/258 (54%), Gaps = 4/258 (1%)
Query: 28 GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHSADI 87
G+ V + D +P + A K ++ V + L + + T++ + D+
Sbjct: 332 GIPVRIKDINPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDL 391
Query: 88 IVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPP 147
I+EA+ E+ ++K+++ +E+++ A I ASNTSS+ I +A+ +RP QVIG+HF +P
Sbjct: 392 IIEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPV 451
Query: 148 PLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLY 207
M LVE+I A TS +T T LA++ GKT + +D AGF VNRIL P INEA L
Sbjct: 452 EKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLT 511
Query: 208 TGVATKEDIDAGM-KLGTNQPMGPLQLADFIGLDVCLSIMKVLHTGLGDSKYAPCPLLVQ 266
G IDA + K G P+GP+QL D +G+D I+ VL G+ AP ++
Sbjct: 512 EGERVAH-IDAALVKFGF--PVGPIQLLDEVGIDTGTKIIPVLEAAYGERFSAPANVVSS 568
Query: 267 YVDAGRLGKKRGIGVFDY 284
++ R G+K G G + Y
Sbjct: 569 ILNDDRKGRKNGRGFYLY 586
>sp|B5YXY4|FADJ_ECO5E Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O157:H7 (strain EC4115 / EHEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 148 bits (374), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 141/258 (54%), Gaps = 4/258 (1%)
Query: 28 GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHSADI 87
G+ V + D +P + A K ++ V + L + + T++ + D+
Sbjct: 332 GIPVRIKDINPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDL 391
Query: 88 IVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPP 147
I+EA+ E+ ++K+++ +E+++ A I ASNTSS+ I +A+ +RP QVIG+HF +P
Sbjct: 392 IIEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPV 451
Query: 148 PLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLY 207
M LVE+I A TS +T T LA++ GKT + +D AGF VNRIL P INEA L
Sbjct: 452 EKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLT 511
Query: 208 TGVATKEDIDAGM-KLGTNQPMGPLQLADFIGLDVCLSIMKVLHTGLGDSKYAPCPLLVQ 266
G IDA + K G P+GP+QL D +G+D I+ VL G+ AP ++
Sbjct: 512 EGERVAH-IDAALVKFGF--PVGPIQLLDEVGIDTGTKIIPVLEAAYGERFSAPANVVSS 568
Query: 267 YVDAGRLGKKRGIGVFDY 284
++ R G+K G G + Y
Sbjct: 569 ILNDDRKGRKNGRGFYLY 586
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,952,849
Number of Sequences: 539616
Number of extensions: 4032497
Number of successful extensions: 13201
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 256
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 12345
Number of HSP's gapped (non-prelim): 386
length of query: 297
length of database: 191,569,459
effective HSP length: 117
effective length of query: 180
effective length of database: 128,434,387
effective search space: 23118189660
effective search space used: 23118189660
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)