Query 022407
Match_columns 297
No_of_seqs 289 out of 2706
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 04:59:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022407.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022407hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mog_A Probable 3-hydroxybutyr 100.0 2.8E-63 9.6E-68 458.8 32.3 287 1-287 1-288 (483)
2 3k6j_A Protein F01G10.3, confi 100.0 8.1E-63 2.8E-67 449.5 33.6 275 4-289 53-327 (460)
3 3zwc_A Peroxisomal bifunctiona 100.0 2.1E-62 7.1E-67 470.8 31.7 282 4-289 315-606 (742)
4 1f0y_A HCDH, L-3-hydroxyacyl-C 100.0 1.2E-60 4.3E-65 419.6 33.1 285 1-285 11-302 (302)
5 1zej_A HBD-9, 3-hydroxyacyl-CO 100.0 3.5E-61 1.2E-65 417.2 28.5 258 6-286 13-273 (293)
6 4e12_A Diketoreductase; oxidor 100.0 6E-61 2E-65 417.6 26.0 277 5-284 4-283 (283)
7 3ado_A Lambda-crystallin; L-gu 100.0 1.3E-58 4.6E-63 404.1 28.4 240 3-242 4-249 (319)
8 2wtb_A MFP2, fatty acid multif 100.0 2.3E-58 7.9E-63 445.0 31.7 279 4-285 311-589 (725)
9 1wdk_A Fatty oxidation complex 100.0 3.2E-58 1.1E-62 443.8 28.9 279 4-285 313-593 (715)
10 1zcj_A Peroxisomal bifunctiona 100.0 3.3E-56 1.1E-60 411.4 28.8 281 4-288 36-326 (463)
11 2dpo_A L-gulonate 3-dehydrogen 100.0 2.4E-49 8.4E-54 348.0 29.1 264 4-269 5-282 (319)
12 3mog_A Probable 3-hydroxybutyr 100.0 6.5E-28 2.2E-32 222.7 17.0 154 119-278 324-477 (483)
13 3ctv_A HBD-10, 3-hydroxyacyl-C 100.0 4.7E-29 1.6E-33 185.2 4.9 106 175-280 3-109 (110)
14 3obb_A Probable 3-hydroxyisobu 99.9 3.1E-23 1.1E-27 180.6 14.6 192 5-226 3-214 (300)
15 3d1l_A Putative NADP oxidoredu 99.9 7.8E-22 2.7E-26 169.5 15.8 212 6-248 11-247 (266)
16 2ewd_A Lactate dehydrogenase,; 99.9 7.3E-23 2.5E-27 180.2 9.4 201 1-239 1-229 (317)
17 4gbj_A 6-phosphogluconate dehy 99.9 3.2E-22 1.1E-26 174.3 13.0 191 6-226 6-215 (297)
18 2h78_A Hibadh, 3-hydroxyisobut 99.9 2.8E-22 9.6E-27 175.5 12.5 194 4-225 2-213 (302)
19 3tri_A Pyrroline-5-carboxylate 99.9 1.2E-20 3.9E-25 163.3 20.9 151 6-182 4-161 (280)
20 3g0o_A 3-hydroxyisobutyrate de 99.9 9.2E-21 3.1E-25 165.9 16.0 197 4-226 6-220 (303)
21 3gt0_A Pyrroline-5-carboxylate 99.8 6.1E-20 2.1E-24 156.0 18.4 190 6-221 3-205 (247)
22 3qha_A Putative oxidoreductase 99.8 1.1E-20 3.7E-25 164.9 14.1 191 5-223 15-225 (296)
23 3pef_A 6-phosphogluconate dehy 99.8 1.4E-20 4.7E-25 163.5 14.0 193 6-226 2-212 (287)
24 3doj_A AT3G25530, dehydrogenas 99.8 1.9E-20 6.4E-25 164.4 13.9 196 4-226 20-232 (310)
25 3l6d_A Putative oxidoreductase 99.8 6.8E-20 2.3E-24 160.5 16.1 192 5-223 9-214 (306)
26 3qsg_A NAD-binding phosphogluc 99.8 2.2E-20 7.5E-25 164.0 12.6 190 3-224 22-231 (312)
27 3ggo_A Prephenate dehydrogenas 99.8 9E-19 3.1E-23 153.7 22.2 156 4-185 32-205 (314)
28 3pdu_A 3-hydroxyisobutyrate de 99.8 2.3E-20 7.7E-25 162.2 11.6 195 6-226 2-212 (287)
29 4dll_A 2-hydroxy-3-oxopropiona 99.8 2.5E-19 8.7E-24 157.8 15.9 190 5-225 31-239 (320)
30 2i76_A Hypothetical protein; N 99.8 1.1E-19 3.9E-24 156.8 11.5 213 6-253 3-240 (276)
31 4ezb_A Uncharacterized conserv 99.8 6.1E-17 2.1E-21 142.3 25.2 193 4-221 23-231 (317)
32 4e21_A 6-phosphogluconate dehy 99.8 2.4E-18 8.3E-23 153.2 16.3 192 5-224 22-273 (358)
33 3dfu_A Uncharacterized protein 99.8 1.2E-18 4.3E-23 144.7 12.7 162 1-215 2-172 (232)
34 3g79_A NDP-N-acetyl-D-galactos 99.8 2.6E-17 8.8E-22 151.2 22.4 207 4-224 17-274 (478)
35 3c24_A Putative oxidoreductase 99.8 7.1E-18 2.4E-22 146.3 17.7 155 4-185 10-184 (286)
36 2izz_A Pyrroline-5-carboxylate 99.8 1E-17 3.5E-22 147.7 18.7 154 5-184 22-186 (322)
37 2y0c_A BCEC, UDP-glucose dehyd 99.8 1.6E-17 5.5E-22 153.4 19.9 205 5-221 8-258 (478)
38 2uyy_A N-PAC protein; long-cha 99.8 3E-18 1E-22 150.7 13.7 193 5-224 30-239 (316)
39 3cky_A 2-hydroxymethyl glutara 99.8 7.2E-18 2.5E-22 147.2 15.8 195 1-223 1-212 (301)
40 1vpd_A Tartronate semialdehyde 99.8 1.3E-17 4.3E-22 145.6 16.4 193 6-224 6-214 (299)
41 3pid_A UDP-glucose 6-dehydroge 99.8 5.2E-17 1.8E-21 147.1 19.4 198 4-221 35-269 (432)
42 3gg2_A Sugar dehydrogenase, UD 99.7 7.9E-17 2.7E-21 147.8 20.0 201 6-223 3-250 (450)
43 1zcj_A Peroxisomal bifunctiona 99.7 4.4E-18 1.5E-22 156.9 11.6 110 161-272 332-446 (463)
44 4a7p_A UDP-glucose dehydrogena 99.7 8.3E-18 2.8E-22 153.6 13.2 201 6-223 9-254 (446)
45 2gf2_A Hibadh, 3-hydroxyisobut 99.7 2.9E-18 9.8E-23 149.4 9.0 188 6-225 1-210 (296)
46 3ojo_A CAP5O; rossmann fold, c 99.7 4.8E-16 1.6E-20 141.0 23.3 196 6-221 12-251 (431)
47 3ktd_A Prephenate dehydrogenas 99.7 6.5E-17 2.2E-21 142.8 17.0 155 3-185 6-187 (341)
48 1yqg_A Pyrroline-5-carboxylate 99.7 1.8E-16 6.2E-21 135.6 19.2 149 6-184 1-152 (263)
49 4gwg_A 6-phosphogluconate dehy 99.7 1.8E-17 6.3E-22 152.4 13.2 195 4-220 3-221 (484)
50 2ew2_A 2-dehydropantoate 2-red 99.7 2.4E-16 8.3E-21 138.2 19.5 195 5-213 3-240 (316)
51 1yb4_A Tartronic semialdehyde 99.7 1.4E-17 4.8E-22 144.9 10.9 189 5-224 3-211 (295)
52 2p4q_A 6-phosphogluconate dehy 99.7 1.6E-17 5.4E-22 154.0 11.7 194 6-221 11-227 (497)
53 3k96_A Glycerol-3-phosphate de 99.7 8.1E-17 2.8E-21 143.4 15.4 197 1-216 25-261 (356)
54 2q3e_A UDP-glucose 6-dehydroge 99.7 4.4E-17 1.5E-21 150.6 14.1 206 5-223 5-259 (467)
55 2f1k_A Prephenate dehydrogenas 99.7 1.2E-15 4.1E-20 131.7 20.3 153 6-186 1-168 (279)
56 2ahr_A Putative pyrroline carb 99.7 4.6E-16 1.6E-20 132.9 17.0 187 5-221 3-198 (259)
57 3b1f_A Putative prephenate deh 99.7 3.7E-16 1.3E-20 135.7 16.6 157 5-185 6-181 (290)
58 1mv8_A GMD, GDP-mannose 6-dehy 99.7 3.6E-16 1.2E-20 143.3 15.9 206 6-222 1-247 (436)
59 2g5c_A Prephenate dehydrogenas 99.7 3.9E-15 1.3E-19 128.6 20.5 155 6-186 2-174 (281)
60 2o3j_A UDP-glucose 6-dehydroge 99.7 5.2E-16 1.8E-20 143.7 15.0 204 5-223 9-265 (481)
61 2zyd_A 6-phosphogluconate dehy 99.7 4.5E-16 1.5E-20 143.9 14.4 193 5-220 15-231 (480)
62 2cvz_A Dehydrogenase, 3-hydrox 99.7 1.4E-16 4.9E-21 138.1 10.4 188 6-224 2-204 (289)
63 2rcy_A Pyrroline carboxylate r 99.7 1.9E-15 6.6E-20 129.1 16.4 147 5-185 4-156 (262)
64 2iz1_A 6-phosphogluconate dehy 99.7 2.7E-15 9.4E-20 138.7 17.3 193 6-221 6-223 (474)
65 3zwc_A Peroxisomal bifunctiona 99.7 4E-16 1.4E-20 150.2 11.9 99 188-286 636-739 (742)
66 1i36_A Conserved hypothetical 99.7 4.6E-15 1.6E-19 127.0 17.1 178 6-222 1-195 (264)
67 4huj_A Uncharacterized protein 99.6 4.6E-16 1.6E-20 129.7 9.9 152 5-185 23-198 (220)
68 2pgd_A 6-phosphogluconate dehy 99.6 1.5E-15 5.1E-20 140.7 13.8 194 6-221 3-220 (482)
69 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.6 3.2E-15 1.1E-19 138.2 16.0 197 6-221 2-221 (478)
70 3k6j_A Protein F01G10.3, confi 99.6 9.6E-17 3.3E-21 146.3 4.7 93 187-279 355-452 (460)
71 1dlj_A UDP-glucose dehydrogena 99.6 4.2E-14 1.4E-18 128.1 20.0 202 6-221 1-240 (402)
72 3vtf_A UDP-glucose 6-dehydroge 99.6 4.2E-14 1.4E-18 128.2 19.7 202 4-221 20-264 (444)
73 1np3_A Ketol-acid reductoisome 99.6 2E-14 6.8E-19 127.3 16.3 149 6-183 17-181 (338)
74 1jay_A Coenzyme F420H2:NADP+ o 99.6 4E-14 1.4E-18 117.1 14.7 157 6-185 1-181 (212)
75 2qyt_A 2-dehydropantoate 2-red 99.6 2.2E-14 7.4E-19 125.9 13.7 171 1-186 4-194 (317)
76 3dtt_A NADP oxidoreductase; st 99.6 3.6E-14 1.2E-18 120.2 14.5 163 5-185 19-213 (245)
77 1evy_A Glycerol-3-phosphate de 99.6 2.5E-14 8.6E-19 128.2 14.3 192 7-215 17-254 (366)
78 1x0v_A GPD-C, GPDH-C, glycerol 99.5 3.7E-14 1.3E-18 126.4 13.2 196 5-215 8-256 (354)
79 2raf_A Putative dinucleotide-b 99.5 8.7E-14 3E-18 114.9 14.4 135 5-186 19-177 (209)
80 3hwr_A 2-dehydropantoate 2-red 99.5 9.2E-14 3.1E-18 122.1 15.3 174 5-197 19-201 (318)
81 1yj8_A Glycerol-3-phosphate de 99.5 1.1E-13 3.7E-18 124.4 15.0 193 5-216 21-273 (375)
82 1z82_A Glycerol-3-phosphate de 99.5 3E-13 1E-17 119.7 16.4 189 6-216 15-236 (335)
83 2pv7_A T-protein [includes: ch 99.5 9.9E-14 3.4E-18 120.8 12.6 139 5-185 21-166 (298)
84 1ks9_A KPA reductase;, 2-dehyd 99.5 3.7E-14 1.3E-18 122.8 9.7 163 6-191 1-174 (291)
85 1txg_A Glycerol-3-phosphate de 99.5 4.1E-13 1.4E-17 118.6 14.9 193 6-215 1-241 (335)
86 2vns_A Metalloreductase steap3 99.5 7E-14 2.4E-18 116.0 9.0 147 5-185 28-194 (215)
87 2hjr_A Malate dehydrogenase; m 99.5 4.8E-13 1.7E-17 117.8 13.7 122 6-141 15-155 (328)
88 3ghy_A Ketopantoate reductase 99.5 3E-13 1E-17 119.7 12.1 169 5-188 3-201 (335)
89 2wtb_A MFP2, fatty acid multif 99.5 1.4E-13 4.6E-18 133.1 10.3 89 187-283 624-716 (725)
90 1pzg_A LDH, lactate dehydrogen 99.5 1.9E-13 6.4E-18 120.6 9.9 128 1-141 5-156 (331)
91 1wdk_A Fatty oxidation complex 99.5 1.8E-13 6.1E-18 132.2 10.3 88 187-283 624-715 (715)
92 3hn2_A 2-dehydropantoate 2-red 99.5 1.9E-12 6.5E-17 113.4 16.0 174 6-195 3-188 (312)
93 1t2d_A LDH-P, L-lactate dehydr 99.4 1E-12 3.5E-17 115.4 12.9 123 5-141 4-150 (322)
94 3i83_A 2-dehydropantoate 2-red 99.4 2E-12 6.9E-17 113.7 13.7 168 6-189 3-184 (320)
95 2yjz_A Metalloreductase steap4 99.0 9.4E-14 3.2E-18 113.9 0.0 147 6-185 20-182 (201)
96 1bg6_A N-(1-D-carboxylethyl)-L 99.3 1.4E-11 4.7E-16 109.8 12.9 114 1-128 1-118 (359)
97 2i6t_A Ubiquitin-conjugating e 99.3 5.6E-12 1.9E-16 109.5 10.0 118 5-141 14-149 (303)
98 1a5z_A L-lactate dehydrogenase 99.3 3.3E-11 1.1E-15 105.8 14.4 141 6-179 1-160 (319)
99 3fr7_A Putative ketol-acid red 99.3 1.4E-11 4.9E-16 111.4 12.1 153 6-181 55-232 (525)
100 1ur5_A Malate dehydrogenase; o 99.3 2.3E-11 7.8E-16 106.3 12.3 99 6-117 3-116 (309)
101 2v6b_A L-LDH, L-lactate dehydr 99.2 7.6E-11 2.6E-15 102.7 12.9 120 6-141 1-138 (304)
102 3tl2_A Malate dehydrogenase; c 99.2 1.6E-10 5.5E-15 100.8 13.6 110 1-123 4-130 (315)
103 2w2k_A D-mandelate dehydrogena 99.2 2.3E-11 8E-16 107.8 7.5 117 6-146 164-285 (348)
104 2gcg_A Glyoxylate reductase/hy 99.2 2.2E-11 7.6E-16 107.3 6.8 117 6-147 156-276 (330)
105 1hyh_A L-hicdh, L-2-hydroxyiso 99.2 2.4E-10 8.1E-15 99.9 12.9 121 6-141 2-146 (309)
106 3c7a_A Octopine dehydrogenase; 99.2 5.6E-11 1.9E-15 107.8 8.9 106 6-124 3-120 (404)
107 3ego_A Probable 2-dehydropanto 99.2 2.2E-10 7.5E-15 100.0 11.5 115 6-139 3-118 (307)
108 3ldh_A Lactate dehydrogenase; 99.1 4.7E-10 1.6E-14 98.0 12.9 105 4-122 20-140 (330)
109 1guz_A Malate dehydrogenase; o 99.1 5.7E-10 1.9E-14 97.5 13.0 99 6-116 1-115 (310)
110 3g17_A Similar to 2-dehydropan 99.1 2.6E-11 8.8E-16 105.3 3.9 166 6-200 3-177 (294)
111 2dbq_A Glyoxylate reductase; D 99.1 6.7E-11 2.3E-15 104.4 6.5 115 6-146 151-269 (334)
112 3ba1_A HPPR, hydroxyphenylpyru 99.1 2.1E-11 7.2E-16 107.3 3.0 111 6-145 165-279 (333)
113 2d4a_B Malate dehydrogenase; a 99.1 4.4E-10 1.5E-14 97.9 11.4 96 7-115 1-111 (308)
114 2d0i_A Dehydrogenase; structur 99.1 7.4E-11 2.5E-15 104.0 6.0 112 6-145 147-263 (333)
115 1lld_A L-lactate dehydrogenase 99.1 1.1E-09 3.8E-14 96.0 13.1 107 5-125 7-129 (319)
116 1ldn_A L-lactate dehydrogenase 99.1 3.8E-10 1.3E-14 98.8 10.0 103 1-116 1-120 (316)
117 3p7m_A Malate dehydrogenase; p 99.1 7.2E-10 2.5E-14 97.0 11.7 105 5-122 5-124 (321)
118 3gvi_A Malate dehydrogenase; N 99.1 9.3E-10 3.2E-14 96.3 12.4 106 5-123 7-127 (324)
119 3gvx_A Glycerate dehydrogenase 99.0 1.1E-10 3.7E-15 100.6 3.2 111 6-145 123-237 (290)
120 1gdh_A D-glycerate dehydrogena 99.0 1.5E-09 5.1E-14 95.1 10.3 114 6-144 147-265 (320)
121 4dgs_A Dehydrogenase; structur 99.0 1.2E-09 4.3E-14 96.0 9.4 111 6-145 172-286 (340)
122 1oju_A MDH, malate dehydrogena 99.0 4.3E-09 1.5E-13 90.9 11.9 106 6-124 1-122 (294)
123 1obb_A Maltase, alpha-glucosid 99.0 7.6E-09 2.6E-13 94.8 14.1 77 5-93 3-86 (480)
124 1u8x_X Maltose-6'-phosphate gl 99.0 7.9E-09 2.7E-13 94.8 13.9 78 5-94 28-112 (472)
125 3pqe_A L-LDH, L-lactate dehydr 98.9 3.5E-09 1.2E-13 92.7 10.4 109 1-124 1-126 (326)
126 3fef_A Putative glucosidase LP 98.9 5.1E-09 1.7E-13 95.2 11.7 77 1-93 1-84 (450)
127 4g2n_A D-isomer specific 2-hyd 98.9 5.6E-09 1.9E-13 92.0 10.4 112 6-144 174-290 (345)
128 1ygy_A PGDH, D-3-phosphoglycer 98.9 5.4E-09 1.8E-13 97.7 10.8 149 6-180 143-308 (529)
129 4fgw_A Glycerol-3-phosphate de 98.9 2.9E-09 1E-13 95.0 8.3 110 6-124 35-155 (391)
130 3nep_X Malate dehydrogenase; h 98.9 1.2E-08 4.2E-13 88.8 11.9 105 6-123 1-121 (314)
131 3evt_A Phosphoglycerate dehydr 98.9 2E-09 6.7E-14 94.2 6.7 114 6-145 138-255 (324)
132 1wwk_A Phosphoglycerate dehydr 98.9 8.7E-09 3E-13 89.7 10.8 114 6-145 143-260 (307)
133 3gg9_A D-3-phosphoglycerate de 98.9 8.5E-09 2.9E-13 91.2 10.6 115 6-145 161-279 (352)
134 3jtm_A Formate dehydrogenase, 98.9 3.4E-09 1.2E-13 93.7 8.0 116 6-145 165-284 (351)
135 2g76_A 3-PGDH, D-3-phosphoglyc 98.9 1E-08 3.6E-13 90.1 11.0 114 6-145 166-283 (335)
136 4aj2_A L-lactate dehydrogenase 98.8 2.8E-08 9.5E-13 87.1 12.5 105 5-123 19-139 (331)
137 2nac_A NAD-dependent formate d 98.8 9.8E-09 3.4E-13 91.9 9.8 116 6-145 192-311 (393)
138 2ekl_A D-3-phosphoglycerate de 98.8 1.1E-08 3.7E-13 89.3 9.8 114 6-145 143-260 (313)
139 2cuk_A Glycerate dehydrogenase 98.8 5.7E-09 1.9E-13 91.0 7.3 109 6-145 145-256 (311)
140 4hy3_A Phosphoglycerate oxidor 98.8 2E-08 6.7E-13 89.1 10.7 114 6-145 177-293 (365)
141 1qp8_A Formate dehydrogenase; 98.8 8.1E-09 2.8E-13 89.6 7.3 109 6-144 125-237 (303)
142 3llv_A Exopolyphosphatase-rela 98.8 1.3E-07 4.5E-12 72.4 13.4 100 5-128 6-112 (141)
143 1s6y_A 6-phospho-beta-glucosid 98.8 7.2E-08 2.5E-12 88.0 13.4 78 5-94 7-93 (450)
144 3k5p_A D-3-phosphoglycerate de 98.8 4E-08 1.4E-12 88.4 11.4 111 6-144 157-271 (416)
145 2x0j_A Malate dehydrogenase; o 98.8 8.1E-08 2.8E-12 82.7 12.2 107 6-125 1-123 (294)
146 1sc6_A PGDH, D-3-phosphoglycer 98.7 4.9E-08 1.7E-12 87.9 10.6 100 6-133 146-248 (404)
147 3hg7_A D-isomer specific 2-hyd 98.7 3.7E-09 1.3E-13 92.4 3.1 114 6-145 141-258 (324)
148 1y6j_A L-lactate dehydrogenase 98.7 1E-07 3.5E-12 83.4 12.2 105 3-123 5-126 (318)
149 2pi1_A D-lactate dehydrogenase 98.7 1.8E-08 6.1E-13 88.6 7.3 113 6-145 142-258 (334)
150 1lss_A TRK system potassium up 98.7 2.8E-07 9.5E-12 70.1 12.8 90 6-119 5-102 (140)
151 4e5n_A Thermostable phosphite 98.7 4.5E-09 1.5E-13 92.3 2.9 103 6-133 146-251 (330)
152 3d0o_A L-LDH 1, L-lactate dehy 98.7 1.2E-07 4.1E-12 82.9 12.0 103 5-121 6-124 (317)
153 3fi9_A Malate dehydrogenase; s 98.7 1.2E-07 4E-12 83.5 11.7 95 5-114 8-120 (343)
154 2j6i_A Formate dehydrogenase; 98.7 8.8E-09 3E-13 91.7 4.4 116 6-145 165-285 (364)
155 1mx3_A CTBP1, C-terminal bindi 98.7 9.1E-09 3.1E-13 90.9 4.3 103 6-133 169-274 (347)
156 1j4a_A D-LDH, D-lactate dehydr 98.7 6.2E-08 2.1E-12 85.2 9.4 113 6-145 147-263 (333)
157 1ez4_A Lactate dehydrogenase; 98.7 3E-07 1E-11 80.3 13.5 103 6-124 6-125 (318)
158 3vku_A L-LDH, L-lactate dehydr 98.7 1.9E-07 6.6E-12 81.5 12.1 105 4-124 8-129 (326)
159 3pp8_A Glyoxylate/hydroxypyruv 98.7 2.8E-09 9.5E-14 93.0 0.3 114 6-145 140-257 (315)
160 2i99_A MU-crystallin homolog; 98.6 4.2E-08 1.4E-12 85.7 7.0 89 4-119 134-225 (312)
161 3fwz_A Inner membrane protein 98.6 5E-07 1.7E-11 69.2 12.3 92 5-120 7-106 (140)
162 2xxj_A L-LDH, L-lactate dehydr 98.6 1.8E-07 6E-12 81.5 10.7 104 6-124 1-120 (310)
163 2zqz_A L-LDH, L-lactate dehydr 98.6 4.8E-07 1.6E-11 79.3 13.5 104 5-124 9-129 (326)
164 3oet_A Erythronate-4-phosphate 98.6 1.7E-08 5.7E-13 89.8 3.5 110 6-145 120-238 (381)
165 3c85_A Putative glutathione-re 98.6 4.9E-07 1.7E-11 72.4 11.7 89 6-117 40-137 (183)
166 3oj0_A Glutr, glutamyl-tRNA re 98.6 3.4E-08 1.2E-12 76.1 4.3 69 6-95 22-91 (144)
167 2yq5_A D-isomer specific 2-hyd 98.6 1.9E-08 6.6E-13 88.5 2.8 112 6-145 149-264 (343)
168 2o4c_A Erythronate-4-phosphate 98.6 2.4E-08 8.2E-13 89.0 3.2 111 6-145 117-235 (380)
169 1y81_A Conserved hypothetical 98.6 1.8E-07 6.2E-12 71.5 7.6 86 5-123 14-104 (138)
170 2g1u_A Hypothetical protein TM 98.5 8.7E-07 3E-11 69.0 11.4 39 5-43 19-57 (155)
171 3ic5_A Putative saccharopine d 98.5 2.7E-07 9.2E-12 68.0 8.0 41 4-44 4-45 (118)
172 1dxy_A D-2-hydroxyisocaproate 98.5 1.7E-07 6E-12 82.3 7.1 112 6-145 146-261 (333)
173 2hmt_A YUAA protein; RCK, KTN, 98.5 1.3E-06 4.3E-11 66.6 11.2 93 5-120 6-105 (144)
174 2duw_A Putative COA-binding pr 98.5 3.1E-07 1.1E-11 70.8 7.0 101 6-140 14-122 (145)
175 2hk9_A Shikimate dehydrogenase 98.4 4.9E-07 1.7E-11 77.4 8.4 68 6-96 130-198 (275)
176 2rir_A Dipicolinate synthase, 98.4 6.6E-07 2.2E-11 77.6 8.2 68 6-95 158-226 (300)
177 1xdw_A NAD+-dependent (R)-2-hy 98.4 1.7E-07 5.9E-12 82.3 4.2 112 6-145 147-262 (331)
178 3d4o_A Dipicolinate synthase s 98.4 8.3E-07 2.8E-11 76.7 8.4 85 6-117 156-241 (293)
179 1b8p_A Protein (malate dehydro 98.4 2.8E-06 9.7E-11 74.5 11.4 109 1-123 1-136 (329)
180 1o6z_A MDH, malate dehydrogena 98.4 3.6E-06 1.2E-10 73.0 11.9 104 6-124 1-123 (303)
181 3l4b_C TRKA K+ channel protien 98.4 5E-06 1.7E-10 68.4 12.1 89 6-118 1-98 (218)
182 3q2i_A Dehydrogenase; rossmann 98.3 5.5E-06 1.9E-10 73.4 11.5 72 4-98 12-89 (354)
183 1mld_A Malate dehydrogenase; o 98.2 6.6E-06 2.2E-10 71.7 10.9 94 6-117 1-115 (314)
184 3e9m_A Oxidoreductase, GFO/IDH 98.2 4E-06 1.4E-10 73.6 9.4 100 1-126 1-105 (330)
185 3euw_A MYO-inositol dehydrogen 98.2 1.2E-05 4.3E-10 70.8 12.3 98 1-126 1-103 (344)
186 1up7_A 6-phospho-beta-glucosid 98.2 1.6E-05 5.5E-10 71.8 13.2 73 5-92 2-81 (417)
187 1smk_A Malate dehydrogenase, g 98.2 5.5E-06 1.9E-10 72.6 9.8 100 5-123 8-128 (326)
188 1v8b_A Adenosylhomocysteinase; 98.2 3.4E-06 1.2E-10 77.1 8.8 96 6-130 258-357 (479)
189 2dc1_A L-aspartate dehydrogena 98.2 2E-06 6.8E-11 71.8 6.6 60 6-97 1-63 (236)
190 2d5c_A AROE, shikimate 5-dehyd 98.2 3.6E-06 1.2E-10 71.5 8.3 66 7-96 118-183 (263)
191 3h9u_A Adenosylhomocysteinase; 98.2 2.2E-06 7.5E-11 77.1 7.0 86 6-121 212-298 (436)
192 3d64_A Adenosylhomocysteinase; 98.2 4.2E-06 1.4E-10 76.8 8.8 87 6-121 278-365 (494)
193 3ce6_A Adenosylhomocysteinase; 98.2 6.2E-06 2.1E-10 75.9 9.2 83 6-117 275-358 (494)
194 3e18_A Oxidoreductase; dehydro 98.1 1.2E-05 4.1E-10 71.4 10.5 98 1-126 1-103 (359)
195 3ulk_A Ketol-acid reductoisome 98.1 1E-05 3.5E-10 72.3 9.6 153 6-179 38-201 (491)
196 4hkt_A Inositol 2-dehydrogenas 98.1 1.9E-05 6.6E-10 69.2 11.1 94 5-126 3-101 (331)
197 1tlt_A Putative oxidoreductase 98.1 7.3E-06 2.5E-10 71.5 8.3 74 1-97 1-78 (319)
198 3db2_A Putative NADPH-dependen 98.1 1.4E-05 4.8E-10 70.8 10.2 98 1-126 2-104 (354)
199 3p2y_A Alanine dehydrogenase/p 98.1 2E-06 6.9E-11 76.3 4.7 39 6-44 185-223 (381)
200 3n58_A Adenosylhomocysteinase; 98.1 1E-05 3.4E-10 72.9 8.9 88 6-123 248-336 (464)
201 3l9w_A Glutathione-regulated p 98.1 5.4E-05 1.8E-09 68.4 13.6 93 5-120 4-103 (413)
202 1id1_A Putative potassium chan 98.1 0.0001 3.5E-09 56.9 13.5 39 6-44 4-43 (153)
203 3uuw_A Putative oxidoreductase 98.1 1.5E-05 5.1E-10 69.2 9.6 95 5-126 6-104 (308)
204 3phh_A Shikimate dehydrogenase 98.1 7.6E-06 2.6E-10 69.4 7.3 66 6-96 119-184 (269)
205 3u95_A Glycoside hydrolase, fa 98.1 1.4E-05 4.9E-10 73.4 9.7 75 6-92 1-84 (477)
206 3hhp_A Malate dehydrogenase; M 98.1 1.2E-05 4.1E-10 69.8 8.6 101 6-124 1-122 (312)
207 3u62_A Shikimate dehydrogenase 98.1 3.9E-06 1.3E-10 70.7 5.3 38 7-44 110-148 (253)
208 2ho3_A Oxidoreductase, GFO/IDH 98.0 4.3E-05 1.5E-09 66.7 12.1 70 6-97 2-75 (325)
209 3kb6_A D-lactate dehydrogenase 98.0 3.7E-06 1.3E-10 73.8 5.2 112 6-145 142-258 (334)
210 4dio_A NAD(P) transhydrogenase 98.0 3.4E-06 1.2E-10 75.5 5.0 39 6-44 191-229 (405)
211 3qy9_A DHPR, dihydrodipicolina 98.0 1.1E-05 3.6E-10 67.6 7.7 86 5-126 3-89 (243)
212 3ezy_A Dehydrogenase; structur 98.0 2E-05 7E-10 69.4 9.9 95 6-126 3-102 (344)
213 1x7d_A Ornithine cyclodeaminas 98.0 1.4E-05 4.7E-10 70.7 8.4 95 5-120 129-226 (350)
214 2z2v_A Hypothetical protein PH 98.0 4.9E-06 1.7E-10 74.0 5.3 75 4-97 15-90 (365)
215 2egg_A AROE, shikimate 5-dehyd 98.0 6.3E-06 2.1E-10 71.2 5.8 40 5-44 141-181 (297)
216 3hdj_A Probable ornithine cycl 98.0 9E-06 3.1E-10 70.7 6.7 92 4-121 120-214 (313)
217 3rc1_A Sugar 3-ketoreductase; 98.0 4.1E-05 1.4E-09 67.7 11.0 95 5-126 27-127 (350)
218 3gvp_A Adenosylhomocysteinase 98.0 2.6E-05 8.8E-10 70.0 9.5 85 6-121 221-307 (435)
219 3cea_A MYO-inositol 2-dehydrog 98.0 6.4E-05 2.2E-09 66.2 12.1 70 5-97 8-84 (346)
220 3abi_A Putative uncharacterize 98.0 4E-06 1.4E-10 74.7 4.2 73 1-96 12-89 (365)
221 3c1a_A Putative oxidoreductase 98.0 2.5E-05 8.5E-10 68.0 9.0 68 5-97 10-82 (315)
222 3m2t_A Probable dehydrogenase; 98.0 2.3E-05 8E-10 69.5 8.8 75 1-97 1-81 (359)
223 1xea_A Oxidoreductase, GFO/IDH 98.0 6E-05 2E-09 65.8 11.3 71 6-97 3-76 (323)
224 1hye_A L-lactate/malate dehydr 98.0 0.00014 4.9E-09 63.2 13.6 105 6-124 1-126 (313)
225 3mz0_A Inositol 2-dehydrogenas 97.9 7E-05 2.4E-09 66.0 11.0 96 6-126 3-104 (344)
226 3evn_A Oxidoreductase, GFO/IDH 97.9 2.5E-05 8.6E-10 68.4 8.0 100 1-126 1-105 (329)
227 1omo_A Alanine dehydrogenase; 97.9 3.7E-05 1.3E-09 67.2 8.9 71 5-95 125-198 (322)
228 1p77_A Shikimate 5-dehydrogena 97.9 1.8E-05 6E-10 67.6 6.6 72 5-96 119-192 (272)
229 2glx_A 1,5-anhydro-D-fructose 97.9 8.5E-05 2.9E-09 65.0 11.1 70 6-97 1-75 (332)
230 4h7p_A Malate dehydrogenase; s 97.9 8.3E-05 2.9E-09 65.3 10.3 106 6-125 25-155 (345)
231 2d59_A Hypothetical protein PH 97.9 5E-05 1.7E-09 58.2 7.8 81 5-117 22-107 (144)
232 2vhw_A Alanine dehydrogenase; 97.8 5.7E-06 2E-10 74.0 2.7 39 6-44 169-207 (377)
233 1leh_A Leucine dehydrogenase; 97.8 5.2E-05 1.8E-09 67.1 8.8 39 6-44 174-212 (364)
234 3o8q_A Shikimate 5-dehydrogena 97.8 3.9E-05 1.3E-09 65.6 7.8 71 6-96 127-199 (281)
235 2eez_A Alanine dehydrogenase; 97.8 1.6E-05 5.5E-10 70.8 5.5 39 6-44 167-205 (369)
236 1iuk_A Hypothetical protein TT 97.8 2.9E-05 9.8E-10 59.3 6.0 83 5-117 13-100 (140)
237 1nyt_A Shikimate 5-dehydrogena 97.8 4.6E-05 1.6E-09 64.9 7.9 39 6-44 120-158 (271)
238 1npy_A Hypothetical shikimate 97.8 6.7E-05 2.3E-09 63.8 8.8 67 6-96 120-187 (271)
239 3jyo_A Quinate/shikimate dehyd 97.8 6.3E-05 2.2E-09 64.4 8.3 43 6-48 128-171 (283)
240 3don_A Shikimate dehydrogenase 97.8 6.9E-06 2.4E-10 70.1 2.2 38 6-43 118-156 (277)
241 3upl_A Oxidoreductase; rossman 97.8 0.00028 9.6E-09 63.9 12.7 151 5-184 23-190 (446)
242 3ec7_A Putative dehydrogenase; 97.8 0.00014 4.9E-09 64.3 10.7 97 5-126 23-125 (357)
243 5mdh_A Malate dehydrogenase; o 97.8 5.9E-05 2E-09 66.1 8.0 96 5-114 3-123 (333)
244 1dih_A Dihydrodipicolinate red 97.8 8.4E-05 2.9E-09 63.3 8.7 77 1-93 1-81 (273)
245 1jw9_B Molybdopterin biosynthe 97.7 6E-05 2.1E-09 63.3 7.2 33 6-38 32-65 (249)
246 3e82_A Putative oxidoreductase 97.7 0.00024 8.1E-09 63.1 11.2 70 4-98 6-81 (364)
247 3ohs_X Trans-1,2-dihydrobenzen 97.7 0.00018 6.1E-09 63.0 10.2 95 6-126 3-104 (334)
248 1gpj_A Glutamyl-tRNA reductase 97.7 3.2E-05 1.1E-09 69.8 5.4 71 5-96 167-239 (404)
249 3gdo_A Uncharacterized oxidore 97.7 0.00024 8.3E-09 62.9 11.0 73 1-98 1-79 (358)
250 1f06_A MESO-diaminopimelate D- 97.7 8.3E-05 2.8E-09 64.9 7.6 92 6-128 4-98 (320)
251 3ond_A Adenosylhomocysteinase; 97.7 0.00015 5.2E-09 66.2 9.5 86 6-120 266-352 (488)
252 3pwz_A Shikimate dehydrogenase 97.7 0.00012 4.2E-09 62.2 8.3 40 6-45 121-161 (272)
253 3u3x_A Oxidoreductase; structu 97.7 0.00028 9.7E-09 62.5 10.9 95 6-126 27-126 (361)
254 4g65_A TRK system potassium up 97.7 0.00011 3.9E-09 67.3 8.5 40 5-44 3-42 (461)
255 1x13_A NAD(P) transhydrogenase 97.7 3.3E-05 1.1E-09 69.6 4.8 39 6-44 173-211 (401)
256 3bio_A Oxidoreductase, GFO/IDH 97.7 0.00017 5.9E-09 62.3 9.2 68 5-97 9-78 (304)
257 3ius_A Uncharacterized conserv 97.7 0.00024 8.1E-09 60.4 9.9 40 5-44 5-44 (286)
258 2aef_A Calcium-gated potassium 97.7 0.00026 8.9E-09 58.6 9.8 90 5-121 9-107 (234)
259 2p2s_A Putative oxidoreductase 97.6 0.00018 6.3E-09 63.0 9.1 96 5-126 4-104 (336)
260 3h2s_A Putative NADH-flavin re 97.6 8.8E-05 3E-09 60.7 6.4 38 6-43 1-39 (224)
261 3dfz_A SIRC, precorrin-2 dehyd 97.6 0.00046 1.6E-08 56.7 10.4 129 6-175 32-163 (223)
262 1ydw_A AX110P-like protein; st 97.6 0.00046 1.6E-08 61.1 11.2 74 5-97 6-84 (362)
263 3fbt_A Chorismate mutase and s 97.6 0.00014 4.9E-09 62.0 7.5 40 5-44 122-162 (282)
264 3kux_A Putative oxidoreductase 97.6 0.00032 1.1E-08 61.9 9.7 92 6-126 8-105 (352)
265 3fhl_A Putative oxidoreductase 97.6 0.00017 5.9E-09 63.9 8.0 97 1-126 1-103 (362)
266 4had_A Probable oxidoreductase 97.6 0.00024 8.4E-09 62.5 8.8 73 4-98 22-100 (350)
267 1nvt_A Shikimate 5'-dehydrogen 97.5 0.00029 9.8E-09 60.4 8.9 75 6-94 129-203 (287)
268 7mdh_A Protein (malate dehydro 97.5 0.00019 6.4E-09 63.6 7.6 110 6-125 33-163 (375)
269 1h6d_A Precursor form of gluco 97.5 0.00049 1.7E-08 62.5 10.7 75 6-98 84-164 (433)
270 4gqa_A NAD binding oxidoreduct 97.5 0.00032 1.1E-08 63.3 9.1 95 6-126 27-134 (412)
271 2ixa_A Alpha-N-acetylgalactosa 97.5 0.00098 3.4E-08 60.7 12.2 76 5-97 20-104 (444)
272 4f3y_A DHPR, dihydrodipicolina 97.5 0.00016 5.6E-09 61.3 6.5 100 5-126 7-110 (272)
273 3moi_A Probable dehydrogenase; 97.5 0.00049 1.7E-08 61.5 9.6 94 6-126 3-102 (387)
274 3ew7_A LMO0794 protein; Q8Y8U8 97.5 0.00026 9E-09 57.6 7.2 38 6-43 1-39 (221)
275 3r6d_A NAD-dependent epimerase 97.4 0.00035 1.2E-08 57.1 7.8 39 5-43 5-46 (221)
276 2b0j_A 5,10-methenyltetrahydro 97.4 0.0059 2E-07 51.2 14.6 109 73-184 129-242 (358)
277 1zh8_A Oxidoreductase; TM0312, 97.4 0.00072 2.5E-08 59.3 9.8 96 5-126 18-120 (340)
278 3tnl_A Shikimate dehydrogenase 97.4 0.00037 1.3E-08 60.4 7.8 42 6-47 155-200 (315)
279 1l7d_A Nicotinamide nucleotide 97.4 0.00023 7.8E-09 63.7 6.6 39 6-44 173-211 (384)
280 1pjc_A Protein (L-alanine dehy 97.4 0.00016 5.5E-09 64.2 5.5 39 6-44 168-206 (361)
281 3f4l_A Putative oxidoreductase 97.4 0.00026 8.9E-09 62.3 6.8 70 6-98 3-79 (345)
282 3btv_A Galactose/lactose metab 97.4 0.0008 2.7E-08 61.2 10.2 73 5-97 20-102 (438)
283 3tum_A Shikimate dehydrogenase 97.4 0.00053 1.8E-08 58.1 8.3 72 5-94 125-197 (269)
284 3ijp_A DHPR, dihydrodipicolina 97.4 0.00038 1.3E-08 59.4 7.3 101 5-126 21-125 (288)
285 3t4e_A Quinate/shikimate dehyd 97.4 0.00067 2.3E-08 58.7 8.9 41 6-46 149-193 (312)
286 3dhn_A NAD-dependent epimerase 97.3 0.00014 4.9E-09 59.6 4.1 40 1-41 1-41 (227)
287 2vt3_A REX, redox-sensing tran 97.3 0.00014 4.9E-09 59.5 3.6 77 6-107 86-166 (215)
288 3e8x_A Putative NAD-dependent 97.3 0.0016 5.6E-08 53.6 10.2 39 6-44 22-61 (236)
289 1ff9_A Saccharopine reductase; 97.2 0.00037 1.3E-08 63.6 6.2 40 5-44 3-42 (450)
290 3eag_A UDP-N-acetylmuramate:L- 97.2 0.0011 3.7E-08 57.9 8.8 35 4-38 3-38 (326)
291 1zud_1 Adenylyltransferase THI 97.2 0.00071 2.4E-08 56.8 7.3 33 6-38 29-62 (251)
292 2yyy_A Glyceraldehyde-3-phosph 97.2 0.0028 9.6E-08 55.6 11.3 86 6-96 3-93 (343)
293 2axq_A Saccharopine dehydrogen 97.2 0.00021 7.3E-09 65.5 4.1 40 5-44 23-63 (467)
294 1nvm_B Acetaldehyde dehydrogen 97.2 0.0013 4.5E-08 56.9 8.9 39 1-40 1-42 (312)
295 3v5n_A Oxidoreductase; structu 97.2 0.0013 4.4E-08 59.5 9.1 73 6-98 38-124 (417)
296 3h8v_A Ubiquitin-like modifier 97.2 0.00094 3.2E-08 57.2 7.3 33 6-38 37-70 (292)
297 3lk7_A UDP-N-acetylmuramoylala 97.1 0.0039 1.3E-07 56.9 11.9 34 5-38 9-42 (451)
298 3dty_A Oxidoreductase, GFO/IDH 97.1 0.0013 4.5E-08 59.0 8.5 73 6-98 13-99 (398)
299 2nvw_A Galactose/lactose metab 97.1 0.0031 1.1E-07 58.0 10.7 72 6-97 40-121 (479)
300 3mtj_A Homoserine dehydrogenas 97.1 0.0017 6E-08 58.8 8.7 86 6-120 11-111 (444)
301 3kkj_A Amine oxidase, flavin-c 97.1 0.00047 1.6E-08 57.0 4.7 32 7-38 4-35 (336)
302 3qvo_A NMRA family protein; st 97.1 0.00048 1.6E-08 57.0 4.6 38 4-41 22-61 (236)
303 1y7t_A Malate dehydrogenase; N 97.1 0.0038 1.3E-07 54.4 10.4 33 6-38 5-45 (327)
304 2ejw_A HDH, homoserine dehydro 97.0 0.0006 2E-08 59.6 4.8 84 6-119 4-98 (332)
305 1p9l_A Dihydrodipicolinate red 97.0 0.0034 1.2E-07 52.3 9.2 32 6-37 1-35 (245)
306 3o9z_A Lipopolysaccaride biosy 97.0 0.0026 9E-08 55.0 8.8 70 5-97 3-85 (312)
307 2czc_A Glyceraldehyde-3-phosph 97.0 0.0014 5E-08 57.3 7.1 82 6-97 3-92 (334)
308 4hb9_A Similarities with proba 97.0 0.0005 1.7E-08 61.3 4.3 34 6-39 2-35 (412)
309 4fb5_A Probable oxidoreductase 97.0 0.0038 1.3E-07 55.4 10.0 70 7-98 27-108 (393)
310 3oa2_A WBPB; oxidoreductase, s 97.0 0.0028 9.6E-08 55.0 8.8 95 5-126 3-111 (318)
311 4hv4_A UDP-N-acetylmuramate--L 96.9 0.0046 1.6E-07 57.1 10.5 67 4-91 21-88 (494)
312 3h5n_A MCCB protein; ubiquitin 96.9 0.0034 1.2E-07 55.3 9.0 33 6-38 119-152 (353)
313 1c0p_A D-amino acid oxidase; a 96.9 0.001 3.5E-08 58.6 5.7 37 1-37 2-38 (363)
314 3ngx_A Bifunctional protein fo 96.9 0.00062 2.1E-08 57.4 3.9 70 6-120 151-222 (276)
315 4gmf_A Yersiniabactin biosynth 96.9 0.0007 2.4E-08 60.2 4.5 69 5-97 7-79 (372)
316 3oqb_A Oxidoreductase; structu 96.9 0.0025 8.6E-08 56.8 8.1 75 1-97 2-96 (383)
317 3dqp_A Oxidoreductase YLBE; al 96.9 0.00074 2.5E-08 55.0 4.2 36 6-41 1-37 (219)
318 4a26_A Putative C-1-tetrahydro 96.9 0.0011 3.8E-08 56.6 5.1 73 6-120 166-239 (300)
319 1lnq_A MTHK channels, potassiu 96.9 0.0051 1.8E-07 53.7 9.6 36 6-42 116-151 (336)
320 3e5r_O PP38, glyceraldehyde-3- 96.9 0.0053 1.8E-07 53.7 9.6 149 6-179 4-173 (337)
321 4h3v_A Oxidoreductase domain p 96.8 0.0036 1.2E-07 55.6 8.7 94 6-125 7-112 (390)
322 3fpf_A Mtnas, putative unchara 96.8 0.019 6.5E-07 49.1 12.5 95 5-119 123-221 (298)
323 1cf2_P Protein (glyceraldehyde 96.8 0.0017 5.7E-08 56.9 6.1 37 6-42 2-40 (337)
324 1vl6_A Malate oxidoreductase; 96.8 0.00085 2.9E-08 59.3 3.8 32 6-37 193-225 (388)
325 3i23_A Oxidoreductase, GFO/IDH 96.8 0.0061 2.1E-07 53.6 9.3 71 6-98 3-79 (349)
326 1y1p_A ARII, aldehyde reductas 96.7 0.022 7.5E-07 49.2 12.9 39 6-44 12-51 (342)
327 1a4i_A Methylenetetrahydrofola 96.7 0.0024 8.1E-08 54.6 6.1 70 6-120 166-237 (301)
328 2nu8_A Succinyl-COA ligase [AD 96.7 0.0022 7.4E-08 54.9 5.8 92 4-125 6-101 (288)
329 1y56_B Sarcosine oxidase; dehy 96.7 0.0014 4.8E-08 58.0 4.8 37 1-37 1-37 (382)
330 1j5p_A Aspartate dehydrogenase 96.7 0.0056 1.9E-07 51.0 7.9 74 6-117 13-88 (253)
331 3m2p_A UDP-N-acetylglucosamine 96.7 0.0035 1.2E-07 53.9 7.0 35 6-40 3-38 (311)
332 3do5_A HOM, homoserine dehydro 96.6 0.00095 3.3E-08 58.2 3.2 100 6-122 3-118 (327)
333 2vou_A 2,6-dihydroxypyridine h 96.6 0.0018 6.1E-08 57.9 5.0 39 1-39 1-39 (397)
334 1c1d_A L-phenylalanine dehydro 96.6 0.0073 2.5E-07 53.1 8.8 35 6-40 176-210 (355)
335 3ff4_A Uncharacterized protein 96.6 0.0018 6.1E-08 47.9 4.1 82 4-117 3-88 (122)
336 1y8q_B Anthracycline-, ubiquit 96.6 0.003 1E-07 59.7 6.3 33 6-38 18-51 (640)
337 1b7g_O Protein (glyceraldehyde 96.6 0.0067 2.3E-07 53.1 8.2 82 6-97 2-90 (340)
338 3dr3_A N-acetyl-gamma-glutamyl 96.6 0.0082 2.8E-07 52.4 8.6 99 4-123 3-109 (337)
339 3p2o_A Bifunctional protein fo 96.6 0.0022 7.5E-08 54.4 4.7 69 6-119 161-231 (285)
340 4ina_A Saccharopine dehydrogen 96.5 0.0045 1.5E-07 55.6 7.0 42 6-47 2-46 (405)
341 1edz_A 5,10-methylenetetrahydr 96.5 0.0013 4.6E-08 56.8 3.2 92 6-122 178-277 (320)
342 3l07_A Bifunctional protein fo 96.5 0.0026 8.9E-08 53.9 4.7 69 6-119 162-232 (285)
343 4a5o_A Bifunctional protein fo 96.5 0.0024 8.1E-08 54.1 4.3 32 6-37 162-194 (286)
344 4b4o_A Epimerase family protei 96.4 0.0019 6.7E-08 55.2 3.9 34 6-39 1-35 (298)
345 3ihm_A Styrene monooxygenase A 96.4 0.0019 6.6E-08 58.4 4.0 33 6-38 23-55 (430)
346 1b0a_A Protein (fold bifunctio 96.4 0.0016 5.4E-08 55.3 3.1 68 6-118 160-229 (288)
347 2dt5_A AT-rich DNA-binding pro 96.4 0.001 3.5E-08 54.2 1.8 78 5-108 80-162 (211)
348 3nix_A Flavoprotein/dehydrogen 96.4 0.0024 8.2E-08 57.3 4.4 38 1-38 1-38 (421)
349 3ip1_A Alcohol dehydrogenase, 96.4 0.021 7.3E-07 51.1 10.6 39 6-44 215-254 (404)
350 2ehd_A Oxidoreductase, oxidore 96.4 0.0062 2.1E-07 50.0 6.4 44 1-44 1-45 (234)
351 2jl1_A Triphenylmethane reduct 96.4 0.0032 1.1E-07 53.3 4.8 37 6-42 1-40 (287)
352 2x3n_A Probable FAD-dependent 96.4 0.0025 8.7E-08 56.8 4.3 35 5-39 6-40 (399)
353 2aqj_A Tryptophan halogenase, 96.4 0.0031 1.1E-07 58.8 5.1 38 1-38 1-41 (538)
354 4g65_A TRK system potassium up 96.4 0.029 1E-06 51.2 11.4 40 4-44 234-273 (461)
355 1u8f_O GAPDH, glyceraldehyde-3 96.4 0.02 6.8E-07 50.0 9.8 39 6-44 4-46 (335)
356 4ew6_A D-galactose-1-dehydroge 96.4 0.0078 2.7E-07 52.5 7.3 62 6-97 26-94 (330)
357 4gsl_A Ubiquitin-like modifier 96.4 0.0058 2E-07 57.2 6.6 33 6-38 327-360 (615)
358 4dgk_A Phytoene dehydrogenase; 96.3 0.0023 8E-08 58.8 4.1 34 5-38 1-34 (501)
359 3keo_A Redox-sensing transcrip 96.3 0.0014 4.9E-08 53.2 2.3 79 5-108 84-170 (212)
360 3oz2_A Digeranylgeranylglycero 96.3 0.0026 8.8E-08 56.2 4.1 32 8-39 7-38 (397)
361 2zbw_A Thioredoxin reductase; 96.3 0.0032 1.1E-07 54.5 4.7 38 1-38 1-38 (335)
362 3ruf_A WBGU; rossmann fold, UD 96.3 0.0026 8.8E-08 55.6 3.9 35 5-39 25-60 (351)
363 3two_A Mannitol dehydrogenase; 96.3 0.011 3.7E-07 51.9 7.9 67 6-95 178-245 (348)
364 4gx0_A TRKA domain protein; me 96.3 0.0035 1.2E-07 58.9 5.0 37 6-42 349-385 (565)
365 1xgk_A Nitrogen metabolite rep 96.3 0.0069 2.4E-07 53.3 6.7 41 1-41 1-42 (352)
366 4fgs_A Probable dehydrogenase 96.3 0.028 9.5E-07 47.6 10.1 38 7-44 30-69 (273)
367 2g82_O GAPDH, glyceraldehyde-3 96.3 0.019 6.5E-07 49.9 9.2 149 7-179 2-168 (331)
368 3e48_A Putative nucleoside-dip 96.3 0.0034 1.2E-07 53.3 4.4 36 6-41 1-38 (289)
369 1qyd_A Pinoresinol-lariciresin 96.3 0.0039 1.3E-07 53.4 4.8 34 5-38 4-38 (313)
370 1yvv_A Amine oxidase, flavin-c 96.2 0.0035 1.2E-07 54.3 4.4 33 6-38 3-35 (336)
371 3cps_A Glyceraldehyde 3-phosph 96.2 0.028 9.5E-07 49.3 10.0 151 5-179 17-187 (354)
372 2xdo_A TETX2 protein; tetracyc 96.2 0.0042 1.4E-07 55.4 4.9 33 6-38 27-59 (398)
373 2e4g_A Tryptophan halogenase; 96.2 0.0047 1.6E-07 57.8 5.3 38 1-38 21-61 (550)
374 3dme_A Conserved exported prot 96.2 0.0049 1.7E-07 53.9 5.1 33 6-38 5-37 (369)
375 1hdo_A Biliverdin IX beta redu 96.2 0.0063 2.1E-07 48.5 5.3 35 6-40 4-39 (206)
376 3ip3_A Oxidoreductase, putativ 96.2 0.0051 1.8E-07 53.7 5.1 73 6-97 3-80 (337)
377 3rp8_A Flavoprotein monooxygen 96.2 0.0044 1.5E-07 55.4 4.8 34 6-39 24-57 (407)
378 3vh1_A Ubiquitin-like modifier 96.2 0.0035 1.2E-07 58.6 4.2 32 6-37 328-360 (598)
379 1oi7_A Succinyl-COA synthetase 96.2 0.015 5.2E-07 49.6 7.9 92 4-125 6-101 (288)
380 4e6p_A Probable sorbitol dehyd 96.2 0.05 1.7E-06 45.3 11.1 39 6-44 9-48 (259)
381 1tt5_B Ubiquitin-activating en 96.2 0.0074 2.5E-07 54.6 6.2 32 6-37 41-73 (434)
382 3slg_A PBGP3 protein; structur 96.2 0.0022 7.5E-08 56.6 2.7 37 5-41 24-62 (372)
383 2ywl_A Thioredoxin reductase r 96.1 0.0055 1.9E-07 48.0 4.8 33 6-38 2-34 (180)
384 3qiv_A Short-chain dehydrogena 96.1 0.016 5.5E-07 48.1 7.9 43 5-47 9-52 (253)
385 1lc0_A Biliverdin reductase A; 96.1 0.0065 2.2E-07 52.1 5.5 88 5-125 7-102 (294)
386 3i6d_A Protoporphyrinogen oxid 96.1 0.0024 8.3E-08 58.0 2.9 37 1-37 1-43 (470)
387 3oh8_A Nucleoside-diphosphate 96.1 0.008 2.7E-07 55.7 6.2 36 5-40 147-183 (516)
388 1kyq_A Met8P, siroheme biosynt 96.1 0.0091 3.1E-07 50.5 6.0 33 6-38 14-46 (274)
389 1lu9_A Methylene tetrahydromet 96.1 0.014 4.7E-07 49.8 7.2 42 6-47 120-162 (287)
390 3ucx_A Short chain dehydrogena 96.1 0.094 3.2E-06 43.8 12.4 41 6-46 12-53 (264)
391 2bka_A CC3, TAT-interacting pr 96.1 0.0085 2.9E-07 49.3 5.7 35 6-40 19-56 (242)
392 3gpi_A NAD-dependent epimerase 96.1 0.0054 1.9E-07 51.9 4.6 35 6-40 4-38 (286)
393 3qj4_A Renalase; FAD/NAD(P)-bi 96.0 0.0038 1.3E-07 54.5 3.6 32 6-37 2-36 (342)
394 3n74_A 3-ketoacyl-(acyl-carrie 96.0 0.063 2.2E-06 44.6 11.2 40 5-44 9-49 (261)
395 3v76_A Flavoprotein; structura 96.0 0.0047 1.6E-07 55.8 4.2 35 5-39 27-61 (417)
396 1pjq_A CYSG, siroheme synthase 96.0 0.033 1.1E-06 50.8 9.9 77 6-105 13-92 (457)
397 3nrn_A Uncharacterized protein 96.0 0.0053 1.8E-07 55.2 4.6 33 6-38 1-33 (421)
398 2c2x_A Methylenetetrahydrofola 96.0 0.0071 2.4E-07 51.1 5.0 68 6-118 159-230 (281)
399 3lyl_A 3-oxoacyl-(acyl-carrier 96.0 0.016 5.5E-07 47.9 7.3 46 1-46 1-47 (247)
400 1hdg_O Holo-D-glyceraldehyde-3 96.0 0.041 1.4E-06 47.9 10.0 148 7-179 2-170 (332)
401 2ozp_A N-acetyl-gamma-glutamyl 96.0 0.03 1E-06 49.1 9.2 100 1-123 1-102 (345)
402 3ihg_A RDME; flavoenzyme, anth 96.0 0.0059 2E-07 56.8 4.9 38 1-38 1-38 (535)
403 2ep5_A 350AA long hypothetical 96.0 0.019 6.5E-07 50.5 7.7 31 5-35 4-36 (350)
404 1ys4_A Aspartate-semialdehyde 96.0 0.0067 2.3E-07 53.5 4.8 30 6-35 9-40 (354)
405 2d8a_A PH0655, probable L-thre 96.0 0.032 1.1E-06 48.8 9.2 39 6-44 169-208 (348)
406 3tfo_A Putative 3-oxoacyl-(acy 95.9 0.017 5.9E-07 48.6 7.2 42 6-47 5-47 (264)
407 3awd_A GOX2181, putative polyo 95.9 0.02 6.8E-07 47.6 7.5 39 6-44 14-53 (260)
408 2wsb_A Galactitol dehydrogenas 95.9 0.02 6.9E-07 47.4 7.5 39 6-44 12-51 (254)
409 4fn4_A Short chain dehydrogena 95.9 0.016 5.3E-07 48.6 6.7 42 7-48 8-51 (254)
410 3o38_A Short chain dehydrogena 95.9 0.12 4.2E-06 43.0 12.4 41 6-46 23-65 (266)
411 3b1j_A Glyceraldehyde 3-phosph 95.9 0.029 9.9E-07 49.0 8.6 36 6-41 3-43 (339)
412 4fs3_A Enoyl-[acyl-carrier-pro 95.9 0.011 3.9E-07 49.4 5.9 40 6-45 7-49 (256)
413 3dje_A Fructosyl amine: oxygen 95.9 0.0072 2.5E-07 54.5 4.9 33 6-38 7-40 (438)
414 3v8b_A Putative dehydrogenase, 95.9 0.062 2.1E-06 45.5 10.5 40 6-45 29-69 (283)
415 3ai3_A NADPH-sorbose reductase 95.9 0.026 9E-07 47.1 8.1 41 6-46 8-49 (263)
416 2zcu_A Uncharacterized oxidore 95.9 0.0084 2.9E-07 50.6 5.0 36 7-42 1-39 (286)
417 3c96_A Flavin-containing monoo 95.9 0.0075 2.6E-07 54.0 4.9 34 6-39 5-39 (410)
418 2d2i_A Glyceraldehyde 3-phosph 95.9 0.049 1.7E-06 48.2 9.9 36 6-41 3-43 (380)
419 3cmc_O GAPDH, glyceraldehyde-3 95.9 0.029 9.9E-07 48.9 8.4 149 6-179 2-170 (334)
420 2z1n_A Dehydrogenase; reductas 95.8 0.024 8.4E-07 47.3 7.7 41 6-46 8-49 (260)
421 1zem_A Xylitol dehydrogenase; 95.8 0.022 7.6E-07 47.6 7.4 39 6-44 8-47 (262)
422 1p3d_A UDP-N-acetylmuramate--a 95.8 0.023 7.9E-07 52.1 8.1 36 4-39 17-53 (475)
423 2yv1_A Succinyl-COA ligase [AD 95.8 0.012 4E-07 50.5 5.7 90 6-125 14-107 (294)
424 3s2e_A Zinc-containing alcohol 95.8 0.046 1.6E-06 47.5 9.7 39 6-44 168-206 (340)
425 2ae2_A Protein (tropinone redu 95.8 0.027 9.2E-07 47.0 7.9 40 6-45 10-50 (260)
426 2gf3_A MSOX, monomeric sarcosi 95.8 0.0084 2.9E-07 53.0 4.9 33 6-38 4-36 (389)
427 3h7a_A Short chain dehydrogena 95.8 0.017 5.9E-07 48.1 6.5 42 6-47 8-50 (252)
428 2uzz_A N-methyl-L-tryptophan o 95.8 0.007 2.4E-07 53.2 4.4 33 6-38 3-35 (372)
429 1e3j_A NADP(H)-dependent ketos 95.8 0.13 4.3E-06 45.0 12.4 39 6-44 170-208 (352)
430 3l6e_A Oxidoreductase, short-c 95.8 0.022 7.7E-07 46.8 7.1 40 6-45 4-44 (235)
431 3pwk_A Aspartate-semialdehyde 95.8 0.053 1.8E-06 47.8 9.7 143 6-183 3-151 (366)
432 3ing_A Homoserine dehydrogenas 95.8 0.0056 1.9E-07 53.2 3.4 34 6-39 5-46 (325)
433 3cgv_A Geranylgeranyl reductas 95.8 0.0082 2.8E-07 53.2 4.6 33 6-38 5-37 (397)
434 3l77_A Short-chain alcohol deh 95.7 0.029 1E-06 45.9 7.7 43 6-48 3-46 (235)
435 3nyw_A Putative oxidoreductase 95.7 0.023 7.9E-07 47.2 7.1 43 6-48 8-51 (250)
436 3ftp_A 3-oxoacyl-[acyl-carrier 95.7 0.16 5.6E-06 42.5 12.5 42 6-47 29-71 (270)
437 3ka7_A Oxidoreductase; structu 95.7 0.0076 2.6E-07 54.0 4.4 33 6-38 1-33 (425)
438 2oln_A NIKD protein; flavoprot 95.7 0.0091 3.1E-07 53.1 4.8 33 6-38 5-37 (397)
439 3pk0_A Short-chain dehydrogena 95.7 0.025 8.4E-07 47.4 7.3 41 6-46 11-52 (262)
440 1ryi_A Glycine oxidase; flavop 95.7 0.0094 3.2E-07 52.5 4.9 32 6-37 18-49 (382)
441 3enk_A UDP-glucose 4-epimerase 95.7 0.01 3.5E-07 51.5 5.0 42 3-44 3-45 (341)
442 2gag_B Heterotetrameric sarcos 95.7 0.0072 2.5E-07 53.7 4.1 33 6-38 22-56 (405)
443 3f1l_A Uncharacterized oxidore 95.7 0.028 9.5E-07 46.7 7.5 43 6-48 13-56 (252)
444 1yb1_A 17-beta-hydroxysteroid 95.7 0.032 1.1E-06 46.9 7.9 40 6-45 32-72 (272)
445 2bi7_A UDP-galactopyranose mut 95.7 0.009 3.1E-07 53.2 4.6 33 6-38 4-36 (384)
446 3itj_A Thioredoxin reductase 1 95.7 0.0075 2.5E-07 52.1 4.0 33 5-37 22-54 (338)
447 2f00_A UDP-N-acetylmuramate--L 95.7 0.027 9.1E-07 51.9 7.9 36 4-39 18-54 (491)
448 1rjw_A ADH-HT, alcohol dehydro 95.7 0.061 2.1E-06 46.8 10.0 39 6-44 166-204 (339)
449 4g81_D Putative hexonate dehyd 95.7 0.017 5.9E-07 48.4 6.1 43 6-48 9-53 (255)
450 2pd6_A Estradiol 17-beta-dehyd 95.7 0.13 4.3E-06 42.7 11.6 39 6-44 8-47 (264)
451 3imf_A Short chain dehydrogena 95.7 0.063 2.1E-06 44.7 9.6 39 6-44 7-46 (257)
452 2rhc_B Actinorhodin polyketide 95.7 0.032 1.1E-06 47.1 7.9 40 6-45 23-63 (277)
453 3atr_A Conserved archaeal prot 95.7 0.0037 1.3E-07 56.9 2.1 34 6-39 7-40 (453)
454 1xyg_A Putative N-acetyl-gamma 95.7 0.025 8.5E-07 49.9 7.3 97 6-123 17-115 (359)
455 3fbg_A Putative arginate lyase 95.7 0.13 4.3E-06 44.9 11.9 40 5-44 151-191 (346)
456 2pnf_A 3-oxoacyl-[acyl-carrier 95.7 0.026 8.8E-07 46.5 7.1 40 6-45 8-48 (248)
457 3i1j_A Oxidoreductase, short c 95.7 0.028 9.5E-07 46.4 7.3 42 6-47 15-57 (247)
458 1fmc_A 7 alpha-hydroxysteroid 95.7 0.021 7.1E-07 47.3 6.5 39 6-44 12-51 (255)
459 3t4x_A Oxidoreductase, short c 95.7 0.027 9.3E-07 47.2 7.3 43 6-48 11-54 (267)
460 3dii_A Short-chain dehydrogena 95.7 0.1 3.5E-06 43.1 10.8 39 6-44 3-42 (247)
461 3hn7_A UDP-N-acetylmuramate-L- 95.7 0.065 2.2E-06 49.7 10.4 34 5-38 19-53 (524)
462 2jah_A Clavulanic acid dehydro 95.7 0.029 9.8E-07 46.5 7.3 40 6-45 8-48 (247)
463 3nyc_A D-arginine dehydrogenas 95.6 0.0044 1.5E-07 54.6 2.4 33 5-38 9-41 (381)
464 1ae1_A Tropinone reductase-I; 95.6 0.035 1.2E-06 46.7 7.9 40 6-45 22-62 (273)
465 3g3e_A D-amino-acid oxidase; F 95.6 0.007 2.4E-07 52.9 3.6 32 6-37 1-38 (351)
466 1uls_A Putative 3-oxoacyl-acyl 95.6 0.029 9.8E-07 46.4 7.2 44 1-44 1-45 (245)
467 2gdz_A NAD+-dependent 15-hydro 95.6 0.029 1E-06 46.9 7.4 39 6-44 8-47 (267)
468 3guy_A Short-chain dehydrogena 95.6 0.02 6.8E-07 46.8 6.2 39 6-44 2-41 (230)
469 3h9e_O Glyceraldehyde-3-phosph 95.6 0.074 2.5E-06 46.2 9.9 106 4-122 6-129 (346)
470 3c4n_A Uncharacterized protein 95.6 0.0082 2.8E-07 53.7 4.1 32 6-37 37-70 (405)
471 4dyv_A Short-chain dehydrogena 95.6 0.09 3.1E-06 44.2 10.3 39 6-44 29-68 (272)
472 3zv4_A CIS-2,3-dihydrobiphenyl 95.6 0.13 4.4E-06 43.4 11.3 44 1-44 1-45 (281)
473 3lf2_A Short chain oxidoreduct 95.6 0.039 1.3E-06 46.2 7.9 43 6-48 9-52 (265)
474 1xq1_A Putative tropinone redu 95.6 0.029 1E-06 46.8 7.1 39 6-44 15-54 (266)
475 3rui_A Ubiquitin-like modifier 95.6 0.023 7.7E-07 49.6 6.4 33 6-38 35-68 (340)
476 3svt_A Short-chain type dehydr 95.6 0.034 1.2E-06 47.0 7.6 41 6-46 12-53 (281)
477 3fpc_A NADP-dependent alcohol 95.5 0.03 1E-06 49.0 7.4 39 6-44 168-207 (352)
478 2gv8_A Monooxygenase; FMO, FAD 95.5 0.012 4.3E-07 53.3 5.1 35 4-38 5-41 (447)
479 3rkr_A Short chain oxidoreduct 95.5 0.032 1.1E-06 46.6 7.3 42 6-47 30-72 (262)
480 3c4a_A Probable tryptophan hyd 95.5 0.008 2.7E-07 53.3 3.7 34 6-39 1-36 (381)
481 3m1a_A Putative dehydrogenase; 95.5 0.062 2.1E-06 45.2 9.2 44 1-44 1-45 (281)
482 2b4q_A Rhamnolipids biosynthes 95.5 0.033 1.1E-06 47.0 7.4 39 6-44 30-69 (276)
483 2yv2_A Succinyl-COA synthetase 95.5 0.018 6.1E-07 49.4 5.7 91 5-125 13-108 (297)
484 2pyx_A Tryptophan halogenase; 95.5 0.0096 3.3E-07 55.3 4.3 36 3-38 5-52 (526)
485 1nff_A Putative oxidoreductase 95.5 0.029 9.8E-07 46.9 6.9 39 6-44 8-47 (260)
486 3ak4_A NADH-dependent quinucli 95.5 0.18 6.1E-06 41.9 11.8 39 6-44 13-52 (263)
487 3uog_A Alcohol dehydrogenase; 95.5 0.21 7.2E-06 43.8 12.8 39 6-44 191-229 (363)
488 1iy8_A Levodione reductase; ox 95.5 0.042 1.4E-06 46.0 7.9 41 6-46 14-55 (267)
489 3alj_A 2-methyl-3-hydroxypyrid 95.5 0.011 3.9E-07 52.2 4.6 34 6-39 12-45 (379)
490 3d3w_A L-xylulose reductase; u 95.5 0.037 1.3E-06 45.5 7.4 39 6-44 8-47 (244)
491 4dry_A 3-oxoacyl-[acyl-carrier 95.5 0.17 5.8E-06 42.7 11.7 42 6-47 34-76 (281)
492 1vdc_A NTR, NADPH dependent th 95.5 0.0084 2.9E-07 51.8 3.6 31 6-36 9-39 (333)
493 2zat_A Dehydrogenase/reductase 95.5 0.028 9.6E-07 46.9 6.7 39 6-44 15-54 (260)
494 3r1i_A Short-chain type dehydr 95.5 0.16 5.4E-06 42.8 11.4 41 6-46 33-74 (276)
495 2cfc_A 2-(R)-hydroxypropyl-COM 95.5 0.034 1.2E-06 45.8 7.1 39 6-44 3-42 (250)
496 1tt5_A APPBP1, amyloid protein 95.5 0.046 1.6E-06 50.7 8.6 33 6-38 33-66 (531)
497 3ioy_A Short-chain dehydrogena 95.5 0.044 1.5E-06 47.4 8.0 43 6-48 9-52 (319)
498 3fbs_A Oxidoreductase; structu 95.5 0.015 5.1E-07 49.1 5.0 32 6-37 3-34 (297)
499 3e1t_A Halogenase; flavoprotei 95.5 0.0088 3E-07 55.4 3.8 33 6-38 8-40 (512)
500 1spx_A Short-chain reductase f 95.4 0.032 1.1E-06 47.0 6.9 40 6-45 7-47 (278)
No 1
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=100.00 E-value=2.8e-63 Score=458.75 Aligned_cols=287 Identities=38% Similarity=0.621 Sum_probs=272.1
Q ss_pred CCCCCcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcc
Q 022407 1 MEEKMKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLK 80 (297)
Q Consensus 1 M~~~~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 80 (297)
|...++||+|||+|.||.+||..|+++|++|++||+++++++++.+++++.+++++++|.++.++.+....+++.+++++
T Consensus 1 Msm~~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 80 (483)
T 3mog_A 1 MSLNVQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIH 80 (483)
T ss_dssp ---CCCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGG
T ss_pred CCCCCCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHH
Confidence 54457899999999999999999999999999999999999999999999999999999998888888888999999998
Q ss_pred cccCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHHHHhhhcCCCCeEEEeecCCCCCCCcceeEecCCC
Q 022407 81 DLHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPPPLMKLVEVIRGAD 160 (297)
Q Consensus 81 ~~~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~~l~~~~~~~~~~~g~h~~~p~~~~~~vev~~~~~ 160 (297)
++++||+||+|+|++.++|+.+++++.+.+++++|++||||+++++++++.+.++.+++|+|||+|+++++++|++.+..
T Consensus 81 ~~~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~i~~ia~~~~~p~~~ig~hf~~Pa~v~~Lvevv~g~~ 160 (483)
T 3mog_A 81 ALAAADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSISITAIAAEIKNPERVAGLHFFNPAPVMKLVEVVSGLA 160 (483)
T ss_dssp GGGGCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHTTTSSSGGGEEEEEECSSTTTCCEEEEEECSS
T ss_pred HhcCCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCCHHHHHHHccCccceEEeeecChhhhCCeEEEecCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHhCCeEEEeccchhhhHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhccCCCccHHHHHHhhchH
Q 022407 161 TSDETFRATKALAERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLYTGVATKEDIDAGMKLGTNQPMGPLQLADFIGLD 240 (297)
Q Consensus 161 ~~~~~~~~~~~l~~~lG~~~v~~~d~~g~i~nri~~~~~~Ea~~l~~~g~~~~~~id~a~~~g~g~~~Gp~~~~D~~Gl~ 240 (297)
+++++++++.++++.+|+++++++|.|||++||++.++++|++.++++|++++++||.+++.|+|||+|||+++|.+|+|
T Consensus 161 Ts~e~~~~~~~l~~~lGk~~v~v~d~~Gfi~Nr~l~~~~~Ea~~l~~~g~~~~~~id~a~~~~~G~p~GP~~l~D~~Gld 240 (483)
T 3mog_A 161 TAAEVVEQLCELTLSWGKQPVRCHSTPGFIVNRVARPYYSEAWRALEEQVAAPEVIDAALRDGAGFPMGPLELTDLIGQD 240 (483)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEESCTTTTHHHHTHHHHHHHHHHHHTTCSCHHHHHHHHHHTTCCSSCHHHHHHHHCHH
T ss_pred CCHHHHHHHHHHHHHhCCEEEEEeccCcchHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhcCCCCCCHHHHHHHhchH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhc-CCCCCCCcHHHHHHHHcCCCCcccCCcccccCCC
Q 022407 241 VCLSIMKVLHTGL-GDSKYAPCPLLVQYVDAGRLGKKRGIGVFDYRRV 287 (297)
Q Consensus 241 ~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~g~~G~~~g~Gfy~y~~~ 287 (297)
+++.+++.+++.+ ++++|.|++++++|+++|++|+|+|+|||+|+++
T Consensus 241 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~v~~g~lG~k~g~GfY~y~~~ 288 (483)
T 3mog_A 241 VNFAVTCSVFNAFWQERRFLPSLVQQELVIGGRLGKKSGLGVYDWRAE 288 (483)
T ss_dssp HHHHHHHHHHHHTTSCGGGCCCHHHHHHHHTTCCBGGGTBSSSBTTSC
T ss_pred HHHHHHHHHHHHhcCCCccCchHHHHHHHHCCCCceeCCCEeEECCCC
Confidence 9999999998775 5668999999999999999999999999999763
No 2
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=100.00 E-value=8.1e-63 Score=449.50 Aligned_cols=275 Identities=27% Similarity=0.456 Sum_probs=257.5
Q ss_pred CCcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccccc
Q 022407 4 KMKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLH 83 (297)
Q Consensus 4 ~~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 83 (297)
.++||+|||+|.||.+||..|+++|++|++||++++ ++.+++++.+++++++|.++.++.+..+.++++++++++++
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e---~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~al~ 129 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ---RCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFHKLS 129 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH---HHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGGGCT
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH---HHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHHHHc
Confidence 468999999999999999999999999999999998 45677888899999999998888888889999999998899
Q ss_pred CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHHHHhhhcCCCCeEEEeecCCCCCCCcceeEecCCCChH
Q 022407 84 SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPPPLMKLVEVIRGADTSD 163 (297)
Q Consensus 84 ~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~~l~~~~~~~~~~~g~h~~~p~~~~~~vev~~~~~~~~ 163 (297)
+||+||+|+||+.++|+++|++|.+.+++++||+||||+++++++++.+.+|++++|+|||+|++.++++||+++..|++
T Consensus 130 ~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSsl~i~~ia~~~~~p~r~iG~HffnPv~~m~LvEIv~g~~Ts~ 209 (460)
T 3k6j_A 130 NCDLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSSLDLNEISSVLRDPSNLVGIHFFNPANVIRLVEIIYGSHTSS 209 (460)
T ss_dssp TCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHHHHTTSSSGGGEEEEECCSSTTTCCEEEEECCSSCCH
T ss_pred cCCEEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCChhHHHHHHhccCCcceEEEEecchhhhCCEEEEEeCCCCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCeEEEeccchhhhHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhccCCCccHHHHHHhhchHHHH
Q 022407 164 ETFRATKALAERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLYTGVATKEDIDAGMKLGTNQPMGPLQLADFIGLDVCL 243 (297)
Q Consensus 164 ~~~~~~~~l~~~lG~~~v~~~d~~g~i~nri~~~~~~Ea~~l~~~g~~~~~~id~a~~~g~g~~~Gp~~~~D~~Gl~~~~ 243 (297)
++++++.++++.+|+++++++|.|||++||++.++++||+.++++.++++++||.+++ ++|+|+|||+++|.+|+|+++
T Consensus 210 e~~~~~~~l~~~lGk~~v~v~d~pGfi~Nril~~~~~EA~~l~~~~Ga~~e~ID~a~~-~~G~pmGPf~l~D~vGlD~~~ 288 (460)
T 3k6j_A 210 QAIATAFQACESIKKLPVLVGNCKSFVFNRLLHVYFDQSQKLMYEYGYLPHQIDKIIT-NFGFLMGPMTVADMNGFDVME 288 (460)
T ss_dssp HHHHHHHHHHHHTTCEEEEESSCCHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHH-HHTBSSCHHHHHHHHCTHHHH
T ss_pred HHHHHHHHHHHHhCCEEEEEecccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH-HcCCCcCHHHHHHHhchHHHH
Confidence 9999999999999999999999999999999999999999999555599999999998 899999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCCcHHHHHHHHcCCCCcccCCcccccCCCCC
Q 022407 244 SIMKVLHTGLGDSKYAPCPLLVQYVDAGRLGKKRGIGVFDYRRVPE 289 (297)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~G~~~g~Gfy~y~~~~~ 289 (297)
.+.+.+ + +.|++++++|+++|++|+|+|+|||+|+++++
T Consensus 289 ~i~~~~----~---~~~~~~l~~~v~~G~lG~KtG~GFY~y~~~~~ 327 (460)
T 3k6j_A 289 KLKKEN----G---LEPNPIEKEMWRLKRYGRKTNKGFYKYDDKTQ 327 (460)
T ss_dssp HHHHHS----C---CCCCHHHHHHHHTTCCBGGGTBSSSEECTTTC
T ss_pred HHHHHh----c---cCchHHHHHHHHCCCCeeecCCEEEECCCCCC
Confidence 988764 2 35679999999999999999999999987654
No 3
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=100.00 E-value=2.1e-62 Score=470.84 Aligned_cols=282 Identities=35% Similarity=0.539 Sum_probs=260.1
Q ss_pred CCcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccccc
Q 022407 4 KMKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLH 83 (297)
Q Consensus 4 ~~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 83 (297)
.++||+|||+|.||++||..++.+|++|+++|++++.++++.+.+.+.+++.++++..+. ......+++.++++++++
T Consensus 315 ~i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~ 392 (742)
T 3zwc_A 315 PVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNG--QASAKPKLRFSSSTKELS 392 (742)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTT--CCCCCCCEEEESCGGGGG
T ss_pred cccEEEEEcccHHHHHHHHHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccc--hhhhhhhhcccCcHHHHh
Confidence 478999999999999999999999999999999999999999999999888777665432 234557888999999999
Q ss_pred CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHHHHhhhcCCCCeEEEeecCCCCCCCcceeEecCCCChH
Q 022407 84 SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPPPLMKLVEVIRGADTSD 163 (297)
Q Consensus 84 ~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~~l~~~~~~~~~~~g~h~~~p~~~~~~vev~~~~~~~~ 163 (297)
+||+|||+|+|+.++|+++|++|++++++++|++||||+++++++++.+.+|+|++|+||||||+.+++|||+++..|++
T Consensus 393 ~aDlVIEAV~E~l~iK~~vf~~le~~~~~~aIlASNTSsl~i~~ia~~~~~p~r~ig~HFfnP~~~m~LVEvi~g~~Ts~ 472 (742)
T 3zwc_A 393 TVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDIASSTDRPQLVIGTHFFSPAHVMRLLEVIPSRYSSP 472 (742)
T ss_dssp SCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHTTSSCGGGEEEEECCSSTTTCCEEEEEECSSCCH
T ss_pred hCCEEEEeccccHHHHHHHHHHHhhcCCCCceEEecCCcCChHHHHhhcCCccccccccccCCCCCCceEEEecCCCCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCeEEEeccchhhhHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhccCCCccHHHHHHhhchHHHH
Q 022407 164 ETFRATKALAERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLYTGVATKEDIDAGMKLGTNQPMGPLQLADFIGLDVCL 243 (297)
Q Consensus 164 ~~~~~~~~l~~~lG~~~v~~~d~~g~i~nri~~~~~~Ea~~l~~~g~~~~~~id~a~~~g~g~~~Gp~~~~D~~Gl~~~~ 243 (297)
++++.+.++.+++||+|++++|.|||++||++.++++|+++++++| +++++||.+++ ++|||+|||+++|.+|+|+..
T Consensus 473 e~~~~~~~~~~~lgK~pV~vkd~pGFi~NRi~~~~~~ea~~l~~eG-~~~~~id~a~~-~~G~pmGPf~l~D~vGlDv~~ 550 (742)
T 3zwc_A 473 TTIATVMSLSKKIGKIGVVVGNCYGFVGNRMLAPYYNQGFFLLEEG-SKPEDVDGVLE-EFGFKMGPFRVSDLAGLDVGW 550 (742)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCSTTTTHHHHHHHHHHHHHHHHHTT-CCHHHHHHHHH-HHTCSSCHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHhCCCCcccCCCCCccHHHHhhHHHHHHHHHHHcC-CCHHHHHHHHH-HcCCCCChHHHHHHhCHHHHH
Confidence 9999999999999999999999999999999999999999999998 68999999997 699999999999999999999
Q ss_pred HHHHHHHhhcCC----------CCCCCcHHHHHHHHcCCCCcccCCcccccCCCCC
Q 022407 244 SIMKVLHTGLGD----------SKYAPCPLLVQYVDAGRLGKKRGIGVFDYRRVPE 289 (297)
Q Consensus 244 ~~~~~~~~~~~~----------~~~~~~~~l~~~~~~g~~G~~~g~Gfy~y~~~~~ 289 (297)
.+.+.++...++ ..+++++++++|+++|++|+|+|+|||+|+++++
T Consensus 551 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~mv~~G~lG~KtG~GFY~Y~~~~~ 606 (742)
T 3zwc_A 551 KIRKGQGLTGPSLPPGTPVRKRGNSRYSPLGDMLCEAGRFGQKTGKGWYQYDKPLG 606 (742)
T ss_dssp HHHHHTTSSSTTSCTTCCTTEETTEECCCHHHHHHTTTCCBGGGTBSSSEESSTTC
T ss_pred HHHHHHHhhCcccCccchhhhcccccccHHHHHHHHCCCccccCCCeeEECCCCCC
Confidence 999887654332 1345678999999999999999999999987654
No 4
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=100.00 E-value=1.2e-60 Score=419.57 Aligned_cols=285 Identities=40% Similarity=0.613 Sum_probs=263.5
Q ss_pred CCCCCcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChh-----hhcccCCceEE
Q 022407 1 MEEKMKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQA-----MGTDAPRRLRC 75 (297)
Q Consensus 1 M~~~~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~~~~i~~ 75 (297)
|...+++|+|||+|.||.+||..|+++|++|++||+++++++.+.+.+++.+++++++|.++.. +......++++
T Consensus 11 ~~~~~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~ 90 (302)
T 1f0y_A 11 KKIIVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIAT 90 (302)
T ss_dssp -CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEE
T ss_pred ccccCCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEE
Confidence 5556789999999999999999999999999999999999999988888888888888876543 23334456788
Q ss_pred ecCcc-cccCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHHHHhhhcCCCCeEEEeecCCCCCCCccee
Q 022407 76 TSNLK-DLHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPPPLMKLVE 154 (297)
Q Consensus 76 ~~~~~-~~~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~~l~~~~~~~~~~~g~h~~~p~~~~~~ve 154 (297)
+++++ .+++||+||+|+|++.++++.+++++.+.++++++|+|++|+++++++++.+.++.++++.||++|++.+++++
T Consensus 91 ~~~~~~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i~~~~l~~~~~~~~~~~g~h~~~P~~~~~~~~ 170 (302)
T 1f0y_A 91 STDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQITSIANATTRQDRFAGLHFFNPVPVMKLVE 170 (302)
T ss_dssp ESCHHHHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSSCHHHHHTTSSCGGGEEEEEECSSTTTCCEEE
T ss_pred ecCHHHhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHhcCCcccEEEEecCCCcccCceEE
Confidence 88887 48999999999999999999999999999999999999999999999999888888999999999998899999
Q ss_pred EecCCCChHHHHHHHHHHHHHhCCeEEEeccchhhhHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhccCCCccHHHHH
Q 022407 155 VIRGADTSDETFRATKALAERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLYTGVATKEDIDAGMKLGTNQPMGPLQLA 234 (297)
Q Consensus 155 v~~~~~~~~~~~~~~~~l~~~lG~~~v~~~d~~g~i~nri~~~~~~Ea~~l~~~g~~~~~~id~a~~~g~g~~~Gp~~~~ 234 (297)
++.+..+++++++.+.++++.+|+.++++++.+|+++||++.+++||+++++++|++++++||.+++.|+|||+|||+++
T Consensus 171 i~~g~~~~~e~~~~~~~l~~~~G~~~v~~~~~~g~i~nr~l~~~~~Ea~~l~~~g~~~~~~id~~~~~g~g~p~GP~~~~ 250 (302)
T 1f0y_A 171 VIKTPMTSQKTFESLVDFSKALGKHPVSCKDTPGFIVNRLLVPYLMEAIRLYERGDASKEDIDTAMKLGAGYPMGPFELL 250 (302)
T ss_dssp EECCTTCCHHHHHHHHHHHHHTTCEEEEECSCTTTTHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHCCSSCHHHHH
T ss_pred EeCCCCCCHHHHHHHHHHHHHcCCceEEecCcccccHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhCCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhchHHHHHHHHHHHhhc-CCCCCCCcHHHHHHHHcCCCCcccCCcccccC
Q 022407 235 DFIGLDVCLSIMKVLHTGL-GDSKYAPCPLLVQYVDAGRLGKKRGIGVFDYR 285 (297)
Q Consensus 235 D~~Gl~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~g~~G~~~g~Gfy~y~ 285 (297)
|.+|+|.++.+++.+++.+ ++++|+|+++|++|+++|++|+|+|+|||+|+
T Consensus 251 D~~Gld~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~g~~G~k~g~Gfy~y~ 302 (302)
T 1f0y_A 251 DYVGLDTTKFIVDGWHEMDAENPLHQPSPSLNKLVAENKFGKKTGEGFYKYK 302 (302)
T ss_dssp HHHCHHHHHHHHHHHHHTTTTCGGGCCCHHHHHHHHTTCCBTTTTBSSSBCC
T ss_pred HHHHHHHHHHHHHHHHHHccCCCccCcCHHHHHHHHcCCCccccCcEeeeCC
Confidence 9999999999999999988 77679999999999999999999999999994
No 5
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=100.00 E-value=3.5e-61 Score=417.24 Aligned_cols=258 Identities=31% Similarity=0.486 Sum_probs=241.9
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcccccCC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHSA 85 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~a 85 (297)
++|+|||+|.||.+||.+|+ +|++|++||+++++++++.+. + .+..+++++++++++++++|
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~-------------l----~~~~~~~i~~~~~~~~~~~a 74 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQ-------------I----PEELLSKIEFTTTLEKVKDC 74 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHH-------------S----CGGGGGGEEEESSCTTGGGC
T ss_pred CeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHH-------------H----HHHHhCCeEEeCCHHHHcCC
Confidence 78999999999999999999 999999999999988877433 1 23345677888888889999
Q ss_pred cEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHHHHhhhcCCCCeEEEeecCCCCCCCcceeEecCCCChHHH
Q 022407 86 DIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPPPLMKLVEVIRGADTSDET 165 (297)
Q Consensus 86 D~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~~l~~~~~~~~~~~g~h~~~p~~~~~~vev~~~~~~~~~~ 165 (297)
|+||+|+||+.++|+.+|+++++. +++|+++|||+++++++++.+.++.+++|+|||+|++.++++|++++..|++++
T Consensus 75 DlVieavpe~~~vk~~l~~~l~~~--~~~IlasntSti~~~~~a~~~~~~~r~~G~Hf~~Pv~~~~lveiv~g~~t~~~~ 152 (293)
T 1zej_A 75 DIVMEAVFEDLNTKVEVLREVERL--TNAPLCSNTSVISVDDIAERLDSPSRFLGVHWMNPPHVMPLVEIVISRFTDSKT 152 (293)
T ss_dssp SEEEECCCSCHHHHHHHHHHHHTT--CCSCEEECCSSSCHHHHHTTSSCGGGEEEEEECSSTTTCCEEEEEECTTCCHHH
T ss_pred CEEEEcCcCCHHHHHHHHHHHhcC--CCCEEEEECCCcCHHHHHHHhhcccceEeEEecCccccCCEEEEECCCCCCHHH
Confidence 999999999999999999999887 899999999999999999988889999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCeEEEeccchhhhHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhccCCCc---cHHHHHHhhchHHH
Q 022407 166 FRATKALAERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLYTGVATKEDIDAGMKLGTNQPM---GPLQLADFIGLDVC 242 (297)
Q Consensus 166 ~~~~~~l~~~lG~~~v~~~d~~g~i~nri~~~~~~Ea~~l~~~g~~~~~~id~a~~~g~g~~~---Gp~~~~D~~Gl~~~ 242 (297)
+++++++++.+|+++++++|. |++||++.++++||+.++++|+ ++++||.+++.|+|+|+ |||+++|.+|+|++
T Consensus 153 ~~~~~~l~~~lGk~~v~v~d~--fi~Nrll~~~~~EA~~l~~~Gv-~~e~id~~~~~g~g~~~~~~GP~~l~D~~Gld~~ 229 (293)
T 1zej_A 153 VAFVEGFLRELGKEVVVCKGQ--SLVNRFNAAVLSEASRMIEEGV-RAEDVDRVWKHHLGLLYTLFGPLGNLDYIGLDVA 229 (293)
T ss_dssp HHHHHHHHHHTTCEEEEEESS--CHHHHHHHHHHHHHHHHHHHTC-CHHHHHHHHHTTHHHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHcCCeEEEeccc--ccHHHHHHHHHHHHHHHHHhCC-CHHHHHHHHHhcCCCCCCCCCHHHHHHHhchHHH
Confidence 999999999999999999986 9999999999999999999987 99999999999999999 99999999999999
Q ss_pred HHHHHHHHhhcCCCCCCCcHHHHHHHHcCCCCcccCCcccccCC
Q 022407 243 LSIMKVLHTGLGDSKYAPCPLLVQYVDAGRLGKKRGIGVFDYRR 286 (297)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~G~~~g~Gfy~y~~ 286 (297)
..+++.+++.+++++|+|+++|++|+++|++|+|+|+|||+|++
T Consensus 230 ~~~~~~l~~~~~~~~~~~~~~l~~~v~~G~lG~Ktg~Gfy~y~~ 273 (293)
T 1zej_A 230 YYASLYLYKRFGDEKFKPPEWLQEKIKKGEVGVKAGKGIYEYGP 273 (293)
T ss_dssp HHHHHHHHHHHCCGGGSCCHHHHHHHHTTCCBGGGTBSSSBCCT
T ss_pred HHHHHHHHHHcCCCcCCCCHHHHHHHHCCCCccccCCEeeecCc
Confidence 99999999999988899999999999999999999999999965
No 6
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=100.00 E-value=6e-61 Score=417.61 Aligned_cols=277 Identities=27% Similarity=0.458 Sum_probs=258.8
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcC-CCChhhhcccCCceEEecCccc-c
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKG-QLSQAMGTDAPRRLRCTSNLKD-L 82 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~i~~~~~~~~-~ 82 (297)
++||+|||+|.||++||..|+++|++|++||+++++++++.+.+++.++++.++| .++.+..+....+++.++++++ +
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~ 83 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQAV 83 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHHh
Confidence 6899999999999999999999999999999999999999999999999888887 6666666666677888889876 8
Q ss_pred cCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHHHHhhhcCCCCeEEEeecCCCCCCCcceeEecCCCCh
Q 022407 83 HSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPPPLMKLVEVIRGADTS 162 (297)
Q Consensus 83 ~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~~l~~~~~~~~~~~g~h~~~p~~~~~~vev~~~~~~~ 162 (297)
++||+||+|+|++.+.++.+++++.+.++++++++||||+++++++++.+.++.+++++||++|++.++++|++++..++
T Consensus 84 ~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~~~~la~~~~~~~~~ig~h~~~p~~~~~lvevv~~~~t~ 163 (283)
T 4e12_A 84 KDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPSDLVGYTGRGDKFLALHFANHVWVNNTAEVMGTTKTD 163 (283)
T ss_dssp TTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHHHHSCGGGEEEEEECSSTTTSCEEEEEECTTSC
T ss_pred ccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCCCHHHHHhhcCCCcceEEEccCCCcccCceEEEEeCCCCC
Confidence 99999999999999999999999999999999999999999999999988888999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCeEEEe-ccchhhhHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhccCCCccHHHHHHhhchHH
Q 022407 163 DETFRATKALAERFGKTVVCS-QDYAGFIVNRILMPMINEAFFTLYTGVATKEDIDAGMKLGTNQPMGPLQLADFIGLDV 241 (297)
Q Consensus 163 ~~~~~~~~~l~~~lG~~~v~~-~d~~g~i~nri~~~~~~Ea~~l~~~g~~~~~~id~a~~~g~g~~~Gp~~~~D~~Gl~~ 241 (297)
+++++.++++++.+|++++++ ++.|||++||++.++++||++++++|++++++||.+++.|+|+|+|||+++|.+|||+
T Consensus 164 ~~~~~~~~~l~~~~g~~~v~v~~~~~g~i~nr~~~~~~~ea~~l~~~g~~~~~~id~~~~~~~g~~~Gp~~~~D~~Gld~ 243 (283)
T 4e12_A 164 PEVYQQVVEFASAIGMVPIELKKEKAGYVLNSLLVPLLDAAAELLVDGIADPETIDKTWRIGTGAPKGPFEIFDIVGLTT 243 (283)
T ss_dssp HHHHHHHHHHHHHTTCEEEECSSCCTTTTHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHCCSSCHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEecCCCCEEehHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhccCCCcCHHHHHHhccHHH
Confidence 999999999999999999998 7899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCCcHHHHHHHHcCCCCcccCCccccc
Q 022407 242 CLSIMKVLHTGLGDSKYAPCPLLVQYVDAGRLGKKRGIGVFDY 284 (297)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~G~~~g~Gfy~y 284 (297)
++.++++ ..++++|+|++++++|+++|++|+|+|+|||+|
T Consensus 244 ~~~~~~~---~~~~~~~~~~~~~~~~v~~g~lG~k~g~Gfy~y 283 (283)
T 4e12_A 244 AYNISSV---SGPKQREFAAYLKENYIDKGKLGLATGEGFYRY 283 (283)
T ss_dssp HHHHHHT---SCHHHHHHHHHHHHHTGGGTCCBGGGTBSSSBC
T ss_pred HHHHHhc---cccCcccCchHHHHHHHHCCCCceeCCeEeecC
Confidence 9999883 333345788999999999999999999999999
No 7
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=100.00 E-value=1.3e-58 Score=404.07 Aligned_cols=240 Identities=27% Similarity=0.410 Sum_probs=225.9
Q ss_pred CCCcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChh-hhcccCCceEEecCccc
Q 022407 3 EKMKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQA-MGTDAPRRLRCTSNLKD 81 (297)
Q Consensus 3 ~~~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~~~~~ 81 (297)
..+.||+|||+|.||++||..++.+|++|++||++++.++++.+++++.++++.++|.++.. ..+..+.+++.++++++
T Consensus 4 p~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~ 83 (319)
T 3ado_A 4 PAAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAE 83 (319)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHH
T ss_pred CCCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHh
Confidence 34689999999999999999999999999999999999999999999999999999988654 45566788999999976
Q ss_pred -ccCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHHHHhhhcCCCCeEEEeecCCCCCCCcceeEecCCC
Q 022407 82 -LHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPPPLMKLVEVIRGAD 160 (297)
Q Consensus 82 -~~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~~l~~~~~~~~~~~g~h~~~p~~~~~~vev~~~~~ 160 (297)
+++||+||||+||+.++|+++|++|++++++++||+||||+++++++++.+.+|+|++|+||||||+++++|||+++..
T Consensus 84 a~~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSsl~is~ia~~~~~p~r~ig~HffNP~~~m~LVEiv~g~~ 163 (319)
T 3ado_A 84 AVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFTGLAHVKQCIVAHPVNPPYYIPLVELVPHPE 163 (319)
T ss_dssp HTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHTTCTTGGGEEEEEECSSTTTCCEEEEEECTT
T ss_pred HhccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhhccchhhhhhccCCCcEEEecCCCCccccchHHhcCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHhCCeEEEe-ccchhhhHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhccCCC---ccHHHHHHh
Q 022407 161 TSDETFRATKALAERFGKTVVCS-QDYAGFIVNRILMPMINEAFFTLYTGVATKEDIDAGMKLGTNQP---MGPLQLADF 236 (297)
Q Consensus 161 ~~~~~~~~~~~l~~~lG~~~v~~-~d~~g~i~nri~~~~~~Ea~~l~~~g~~~~~~id~a~~~g~g~~---~Gp~~~~D~ 236 (297)
|++++++++..+++.+|++|+++ +|.|||++||++.++++||++++++|+++++|||.+++.|+|+| +|||+++|+
T Consensus 164 Ts~~~~~~~~~~~~~~gk~pv~v~kd~pGFi~NRl~~~~~~EA~~lv~eGvas~edID~~~~~g~g~~~a~mGPf~~~Dl 243 (319)
T 3ado_A 164 TSPATVDRTHALMRKIGQSPVRVLKEIDGFVLNRLQYAIISEAWRLVEEGIVSPSDLDLVMSDGLGMRYAFIGPLETMHL 243 (319)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEECSSCCTTTTHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHTTHHHHHTTSCHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhCCccCCcCCCCCCEeHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhCCCCCCCCcchhhhhhh
Confidence 99999999999999999999854 89999999999999999999999999999999999999999987 899999999
Q ss_pred hchHHH
Q 022407 237 IGLDVC 242 (297)
Q Consensus 237 ~Gl~~~ 242 (297)
.|++..
T Consensus 244 ~G~~~~ 249 (319)
T 3ado_A 244 NAEGML 249 (319)
T ss_dssp TTTSHH
T ss_pred cCccHH
Confidence 997754
No 8
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=100.00 E-value=2.3e-58 Score=445.01 Aligned_cols=279 Identities=27% Similarity=0.485 Sum_probs=248.0
Q ss_pred CCcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccccc
Q 022407 4 KMKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLH 83 (297)
Q Consensus 4 ~~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 83 (297)
.+++|+|||+|.||.+||..|+++||+|++||++++.++++.+++++.+++++++|.+++++.+....+++.+++++.++
T Consensus 311 ~~~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~~~~~ 390 (725)
T 2wtb_A 311 KIKKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDYESFR 390 (725)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSSGGGT
T ss_pred cCcEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCHHHHC
Confidence 35789999999999999999999999999999999999999999999999998889888777777889999999997799
Q ss_pred CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHHHHhhhcCCCCeEEEeecCCCCCCCcceeEecCCCChH
Q 022407 84 SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPPPLMKLVEVIRGADTSD 163 (297)
Q Consensus 84 ~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~~l~~~~~~~~~~~g~h~~~p~~~~~~vev~~~~~~~~ 163 (297)
+||+||+|+|++.++|+.+++++.+++++++||+||||+++++++++.+.++++++|+|||+|++.++++|++.+..|++
T Consensus 391 ~aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntStl~i~~la~~~~~p~~~iG~hf~~P~~~~~lvevv~g~~t~~ 470 (725)
T 2wtb_A 391 DVDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTSTIDLNKIGERTKSQDRIVGAHFFSPAHIMPLLEIVRTNHTSA 470 (725)
T ss_dssp TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHTTTCSCTTTEEEEEECSSTTTCCEEEEEECSSCCH
T ss_pred CCCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCCCCHHHHHHHhcCCCCEEEecCCCCcccCceEEEEECCCCCH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCeEEEeccchhhhHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhccCCCccHHHHHHhhchHHHH
Q 022407 164 ETFRATKALAERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLYTGVATKEDIDAGMKLGTNQPMGPLQLADFIGLDVCL 243 (297)
Q Consensus 164 ~~~~~~~~l~~~lG~~~v~~~d~~g~i~nri~~~~~~Ea~~l~~~g~~~~~~id~a~~~g~g~~~Gp~~~~D~~Gl~~~~ 243 (297)
++++.+.++++.+|+++++++|.+||++||++.++++|++.++++| +++++||.++ .++|+|+|||+++|.+|+|+++
T Consensus 471 e~~~~~~~l~~~lGk~~v~v~d~~Gfi~Nril~~~~~Ea~~l~~~G-~~~e~id~~~-~~~g~p~Gp~~l~D~vGld~~~ 548 (725)
T 2wtb_A 471 QVIVDLLDVGKKIKKTPVVVGNCTGFAVNRMFFPYTQAAMFLVECG-ADPYLIDRAI-SKFGMPMGPFRLCDLVGFGVAI 548 (725)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHHHHHHHHHTT-CCHHHHHHHH-HHHTCSSCHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHH-HHcCCCCCHHHHHHHhchHHHH
Confidence 9999999999999999999999999999999999999999999997 7999999999 7999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCCcHHHHHHHHcCCCCcccCCcccccC
Q 022407 244 SIMKVLHTGLGDSKYAPCPLLVQYVDAGRLGKKRGIGVFDYR 285 (297)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~G~~~g~Gfy~y~ 285 (297)
.+++.+++.++++.|.| +++++|+++|++|+|+|+|||+|+
T Consensus 549 ~i~~~~~~~~~~~~~~~-~~l~~~v~~g~lG~k~g~GfY~y~ 589 (725)
T 2wtb_A 549 ATATQFIENFSERTYKS-MIIPLMQEDKRAGEATRKGFYLYD 589 (725)
T ss_dssp HHHHHHHHHSGGGCCCC-THHHHHHTTC--------------
T ss_pred HHHHHHHHhcCCccCCh-HHHHHHHHCCCceecCCceeEeCC
Confidence 99999999888722898 999999999999999999999995
No 9
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=100.00 E-value=3.2e-58 Score=443.82 Aligned_cols=279 Identities=34% Similarity=0.518 Sum_probs=265.6
Q ss_pred CCcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccccc
Q 022407 4 KMKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLH 83 (297)
Q Consensus 4 ~~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 83 (297)
.++||+|||+|.||.+||..|+++||+|++||+++++++.+.+++++.+++++++|.+++++.+....+++.+++++.++
T Consensus 313 ~i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~~~~~ 392 (715)
T 1wdk_A 313 DVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFG 392 (715)
T ss_dssp CCSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSSTTGG
T ss_pred cCCEEEEECCChhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCHHHHC
Confidence 46789999999999999999999999999999999999999999999999999999888777777778889999997799
Q ss_pred CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHHHHhhhcCCCCeEEEeecCCCCCCCcceeEecCCCChH
Q 022407 84 SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPPPLMKLVEVIRGADTSD 163 (297)
Q Consensus 84 ~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~~l~~~~~~~~~~~g~h~~~p~~~~~~vev~~~~~~~~ 163 (297)
+||+||+|+||+.++|+.+++++.+++++++||+||||+++++++++.+.++.+++|+|||+|++.++++|++.+..|++
T Consensus 393 ~aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntStl~i~~la~~~~~~~~~ig~hf~~P~~~~~lvevv~g~~t~~ 472 (715)
T 1wdk_A 393 NVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSD 472 (715)
T ss_dssp GCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHHHGGGCSCGGGEEEEECCSSTTTCCEEEEEECSSCCH
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCCCHHHHHHHhcCccceEEEEccCCcccCceEEEEECCCCCH
Confidence 99999999999999999999999999999999999999999999999988889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCeEEEeccchhhhHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhccCCCccHHHHHHhhchHHHH
Q 022407 164 ETFRATKALAERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLYTGVATKEDIDAGMKLGTNQPMGPLQLADFIGLDVCL 243 (297)
Q Consensus 164 ~~~~~~~~l~~~lG~~~v~~~d~~g~i~nri~~~~~~Ea~~l~~~g~~~~~~id~a~~~g~g~~~Gp~~~~D~~Gl~~~~ 243 (297)
++++.+.++++.+|+.+++++|.+||++||++.++++|++.++++| +++++||.++ .++|+|+|||+++|.+|+|+++
T Consensus 473 e~~~~~~~l~~~lGk~~v~v~d~~Gfi~Nril~~~~~Ea~~l~~~G-~~~~~id~~~-~~~G~p~Gp~~l~D~vGld~~~ 550 (715)
T 1wdk_A 473 LAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAG-VDFVRIDKVM-EKFGWPMGPAYLMDVVGIDTGH 550 (715)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESCTTTTHHHHHHHHHHHHHHHHHTT-CCHHHHHHHH-HHHTCSSCHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHhCCEeEEEcCCCChhhhHHHHHHHHHHHHHHHCC-CCHHHHHHHH-HHcCCCCCHHHHHHHhhHHHHH
Confidence 9999999999999999999999999999999999999999999997 7999999999 7899999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCCc--HHHHHHHHcCCCCcccCCcccccC
Q 022407 244 SIMKVLHTGLGDSKYAPC--PLLVQYVDAGRLGKKRGIGVFDYR 285 (297)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~--~~l~~~~~~g~~G~~~g~Gfy~y~ 285 (297)
.+++.+++.+++ +|+|+ +++++|+++|++|+|+|+|||+|+
T Consensus 551 ~i~~~~~~~~~~-~~~~~~~~~l~~~v~~g~lG~k~g~GfY~y~ 593 (715)
T 1wdk_A 551 HGRDVMAEGFPD-RMKDDRRSAIDALYEAKRLGQKNGKGFYAYE 593 (715)
T ss_dssp HHHHHHHHHCHH-HHCCSSCCHHHHHHHTTCCBTTTTBSSSEEC
T ss_pred HHHHHHHHhcCC-ccCCChHHHHHHHHhCchhhhcCCcEEEecc
Confidence 999999988876 79998 999999999999999999999996
No 10
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=100.00 E-value=3.3e-56 Score=411.39 Aligned_cols=281 Identities=35% Similarity=0.537 Sum_probs=250.3
Q ss_pred CCcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccccc
Q 022407 4 KMKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLH 83 (297)
Q Consensus 4 ~~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 83 (297)
.+++|+|||+|.||.+||..|+++|++|++||+++++++.+.+.+++.+++++++|.++.++.+.... +.++++++++
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~--~i~~~~~~~~ 113 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKL--RFSSSTKELS 113 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCE--EEESCGGGGT
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHh--hhcCCHHHHC
Confidence 36799999999999999999999999999999999999999988888888777776544333222223 3467777799
Q ss_pred CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHHHHhhhcCCCCeEEEeecCCCCCCCcceeEecCCCChH
Q 022407 84 SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPPPLMKLVEVIRGADTSD 163 (297)
Q Consensus 84 ~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~~l~~~~~~~~~~~g~h~~~p~~~~~~vev~~~~~~~~ 163 (297)
+||+||+|+|++.++|+.+++++.+.+++++||++|||+++++++++.+.++.+++|+|||+|++.++++|++.+..+++
T Consensus 114 ~aDlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~snTs~~~~~~la~~~~~~~~~ig~hf~~P~~~~~lvevv~g~~t~~ 193 (463)
T 1zcj_A 114 TVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDIASSTDRPQLVIGTHFFSPAHVMRLLEVIPSRYSSP 193 (463)
T ss_dssp TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHTTSSCGGGEEEEEECSSTTTCCEEEEEECSSCCH
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCcCHHHHHHHhcCCcceEEeecCCCcccceeEEEeCCCCCCH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCeEEEeccchhhhHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhccCCCccHHHHHHhhchHHHH
Q 022407 164 ETFRATKALAERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLYTGVATKEDIDAGMKLGTNQPMGPLQLADFIGLDVCL 243 (297)
Q Consensus 164 ~~~~~~~~l~~~lG~~~v~~~d~~g~i~nri~~~~~~Ea~~l~~~g~~~~~~id~a~~~g~g~~~Gp~~~~D~~Gl~~~~ 243 (297)
++++.+.++++.+|++++++++.+||++||++.++++|++.++++| +++++||.+++ ++|+|+|||+++|.+|+|++.
T Consensus 194 e~~~~~~~l~~~lGk~~v~v~~~~gfi~Nrll~~~~~ea~~l~~~G-~~~~~id~~~~-~~g~p~Gp~~l~D~~GlD~~~ 271 (463)
T 1zcj_A 194 TTIATVMSLSKKIGKIGVVVGNCYGFVGNRMLAPYYNQGFFLLEEG-SKPEDVDGVLE-EFGFKMGPFRVSDLAGLDVGW 271 (463)
T ss_dssp HHHHHHHHHHHHTTCEEEEBCCSTTTTHHHHHHHHHHHHHHHHHTT-CCHHHHHHHHH-HHTCSSCHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHH-HcCCCCcHHHHHHHcchHHHH
Confidence 9999999999999999999999999999999999999999999998 89999999998 899999999999999999999
Q ss_pred HHHHHHH---hh-------cCCCCCCCcHHHHHHHHcCCCCcccCCcccccCCCC
Q 022407 244 SIMKVLH---TG-------LGDSKYAPCPLLVQYVDAGRLGKKRGIGVFDYRRVP 288 (297)
Q Consensus 244 ~~~~~~~---~~-------~~~~~~~~~~~l~~~~~~g~~G~~~g~Gfy~y~~~~ 288 (297)
.+++.+. .. ..++.+++++++++|+++|++|+|+|+|||+|++++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~g~lG~k~g~Gfy~y~~~g 326 (463)
T 1zcj_A 272 KIRKGQGLTGPSLPPGTPVRKRGNSRYSPLGDMLCEAGRFGQKTGKGWYQYDKPL 326 (463)
T ss_dssp HHHHHTTSSSSCCCTTCCTTEETTEECCTHHHHHHHTTCCBGGGTBSSEEESSTT
T ss_pred HHHHHHhhhcccccccccccccccccchHHHHHHHHCCCCeeecCCeeccCCCCC
Confidence 9998772 22 122233557999999999999999999999996433
No 11
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=100.00 E-value=2.4e-49 Score=348.01 Aligned_cols=264 Identities=26% Similarity=0.406 Sum_probs=231.4
Q ss_pred CCcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChh-hhcccCCceEEecCccc-
Q 022407 4 KMKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQA-MGTDAPRRLRCTSNLKD- 81 (297)
Q Consensus 4 ~~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~~~~~- 81 (297)
.++||+|||+|.||.+||..|+++||+|++||+++++++++.+++++.++.+.+.|.+... .......++++++++++
T Consensus 5 ~~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~ea 84 (319)
T 2dpo_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEA 84 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHH
T ss_pred CCceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHHH
Confidence 4689999999999999999999999999999999999999999999999999888854321 12234567888999876
Q ss_pred ccCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHHHHhhhcCCCCeEEEeecCCCCCCCcceeEecCCCC
Q 022407 82 LHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPPPLMKLVEVIRGADT 161 (297)
Q Consensus 82 ~~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~~l~~~~~~~~~~~g~h~~~p~~~~~~vev~~~~~~ 161 (297)
+++||+||+|+|++.++|+.+++++.+.+++++||+|+||+++++++++.+.++.+++++||++||+.++++|++++..+
T Consensus 85 v~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i~~~~la~~~~~~~r~ig~Hp~~P~~~~~lveiv~g~~t 164 (319)
T 2dpo_A 85 VEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFTGLAHVKQCIVAHPVNPPYYIPLVELVPHPET 164 (319)
T ss_dssp TTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHTTCTTGGGEEEEEECSSTTTCCEEEEEECTTC
T ss_pred HhcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCChHHHHHHHhcCCCCCeEEeecCCchhhcceEEEeCCCCC
Confidence 89999999999999999999999999999999999999999999999999988999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHhCCeEEEe-ccchhhhHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhccCCC---ccHHHHHHhh
Q 022407 162 SDETFRATKALAERFGKTVVCS-QDYAGFIVNRILMPMINEAFFTLYTGVATKEDIDAGMKLGTNQP---MGPLQLADFI 237 (297)
Q Consensus 162 ~~~~~~~~~~l~~~lG~~~v~~-~d~~g~i~nri~~~~~~Ea~~l~~~g~~~~~~id~a~~~g~g~~---~Gp~~~~D~~ 237 (297)
+++++++++++++.+|++++++ ++.+||++||++.++++||+.++++|++++++||.+++.|+|+| +|||+++|+.
T Consensus 165 ~~e~~~~~~~l~~~lGk~~v~v~~~~~Gfi~Nrll~a~~~EA~~l~~~g~~~~~~id~a~~~g~g~~~a~~GP~~~~dl~ 244 (319)
T 2dpo_A 165 SPATVDRTHALMRKIGQSPVRVLKEIDGFVLNRLQYAIISEAWRLVEEGIVSPSDLDLVMSDGLGMRYAFIGPLETMHLN 244 (319)
T ss_dssp CHHHHHHHHHHHHHTTCEEEECSSCCTTTTHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHTTHHHHHTTSCHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCEEEEECCCcCCchHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhCCCCCccccCHHHHHHhc
Confidence 9999999999999999999998 58999999999999999999999999999999999999999987 8999999999
Q ss_pred chHHHHHH-------HHHHHhhcCC-CCCCCcHHHHHHHH
Q 022407 238 GLDVCLSI-------MKVLHTGLGD-SKYAPCPLLVQYVD 269 (297)
Q Consensus 238 Gl~~~~~~-------~~~~~~~~~~-~~~~~~~~l~~~~~ 269 (297)
| +.+... ++.++..+++ +.|.+ ++..++.+
T Consensus 245 g-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 282 (319)
T 2dpo_A 245 A-EGMLSYSDRYSEGMKRVLKSFGSIPEFSG-ATVEKVNQ 282 (319)
T ss_dssp T-TSHHHHHHHHHHHHHHHHHTCCCCCCCCH-HHHHHHHH
T ss_pred C-chHHHHHHHHhHHHHHHHHHcCCCCCCCH-HHHHHHHH
Confidence 6 433333 3455666774 45543 44544443
No 12
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=99.95 E-value=6.5e-28 Score=222.73 Aligned_cols=154 Identities=31% Similarity=0.450 Sum_probs=138.0
Q ss_pred cCCCccHHHHhhhcCCCCeEEEeecCCCCCCCcceeEecCCCChHHHHHHHHHHHHHhCCeEEEeccchhhhHHHHHHHH
Q 022407 119 NTSSISITRLASATSRPCQVIGMHFMNPPPLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQDYAGFIVNRILMPM 198 (297)
Q Consensus 119 ~ts~~~~~~l~~~~~~~~~~~g~h~~~p~~~~~~vev~~~~~~~~~~~~~~~~l~~~lG~~~v~~~d~~g~i~nri~~~~ 198 (297)
.+++.+.++.+ ..+|.++++.++++ .+++|++.+..|++++++.+..+++++|++++.++|.|||++||++.++
T Consensus 324 ~~~~~~~~~~~--~~~~~~~v~~~~~~----~~~vev~~~~~t~~~~~~~~~~~~~~~gk~~~~~~d~~g~i~~Rll~~~ 397 (483)
T 3mog_A 324 ETQGETAQALA--IRLARPVVVIDKMA----GKVVTIAAAAVNPDSATRKAIYYLQQQGKTVLQIADYPGMLIWRTVAMI 397 (483)
T ss_dssp ECSSSCHHHHH--HHHTSCEEEEECCS----SSEEEEEECTTSCHHHHHHHHHHHHTTTCEEEECCCCTTTTHHHHHHHH
T ss_pred ccCCcchHHHh--hccccceeeeeccc----cceEEEecCCCCCHHHHHHHHHHHHHcCCceeeecccccHHHHHHHHHH
Confidence 45555555552 24568899999987 6789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCHHHHHHHHhhccCCCccHHHHHHhhchHHHHHHHHHHHhhcCCCCCCCcHHHHHHHHcCCCCcccC
Q 022407 199 INEAFFTLYTGVATKEDIDAGMKLGTNQPMGPLQLADFIGLDVCLSIMKVLHTGLGDSKYAPCPLLVQYVDAGRLGKKRG 278 (297)
Q Consensus 199 ~~Ea~~l~~~g~~~~~~id~a~~~g~g~~~Gp~~~~D~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~G~~~g 278 (297)
+|||++++++|+++++|||.+++.|+|||+|||+|+|.+|++.++.+++.+++.+++++|+|+++|++|+++|++|..-|
T Consensus 398 ~nEA~~~l~eGvas~~diD~a~~~G~G~P~GPl~~~D~~Gld~~~~~~~~l~~~~g~~~~~p~~lL~~~v~~G~~~~~~~ 477 (483)
T 3mog_A 398 INEALDALQKGVASEQDIDTAMRLGVNYPYGPLAWGAQLGWQRILRLLENLQHHYGEERYRPCSLLRQRALLESGYESEG 477 (483)
T ss_dssp HHHHHHHHHTTSSCHHHHHHHHHHHSCCSSCHHHHHHHHCHHHHHHHHHHHHHHHCCGGGCCCHHHHHHHHHHTCC----
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHhCCCCCCCHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHcCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999889999999999999987665433
No 13
>3ctv_A HBD-10, 3-hydroxyacyl-COA dehydrogenase; structural genomics, APC7539, PSI-2, protein structure initiative; 2.46A {Archaeoglobus fulgidus dsm 4304}
Probab=99.95 E-value=4.7e-29 Score=185.22 Aligned_cols=106 Identities=27% Similarity=0.362 Sum_probs=90.2
Q ss_pred HhCCeEE-EeccchhhhHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhccCCCccHHHHHHhhchHHHHHHHHHHHhhc
Q 022407 175 RFGKTVV-CSQDYAGFIVNRILMPMINEAFFTLYTGVATKEDIDAGMKLGTNQPMGPLQLADFIGLDVCLSIMKVLHTGL 253 (297)
Q Consensus 175 ~lG~~~v-~~~d~~g~i~nri~~~~~~Ea~~l~~~g~~~~~~id~a~~~g~g~~~Gp~~~~D~~Gl~~~~~~~~~~~~~~ 253 (297)
.++|.++ .++|.|||++||++.+++|||++++++|+++++|||.+++.|+|||+|||+++|.+|++.+..+++.+++.+
T Consensus 3 ~~~K~~v~~~~d~~gfi~nRll~~~~~eA~~ll~eGva~~~dID~a~~~g~G~p~GPf~~~D~~Gld~~~~~~~~l~~~~ 82 (110)
T 3ctv_A 3 SKGRPQIDSSKATDKINPMDFTFVEINEAVKLVEMGVATPQDIDTAIKLGLNRPFGPFELAKQFGAEQIAKRLEELAKQF 82 (110)
T ss_dssp --------------CCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHTTCSSCHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCCCCCcccCCCCccHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3678888 889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcHHHHHHHHcCCCCcccCCc
Q 022407 254 GDSKYAPCPLLVQYVDAGRLGKKRGIG 280 (297)
Q Consensus 254 ~~~~~~~~~~l~~~~~~g~~G~~~g~G 280 (297)
++++|+|+++|++|+++|++|+|+|+|
T Consensus 83 g~~~~~p~~~L~~~v~~G~lG~k~g~G 109 (110)
T 3ctv_A 83 GKKIFEPAKTLKEGKLEELLKAGKAEG 109 (110)
T ss_dssp CCGGGSCCHHHHTTTHHHHHHHHHHC-
T ss_pred CCCcCCCCHHHHHHHHcCCCCccCCCC
Confidence 987899999999999999999999988
No 14
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.90 E-value=3.1e-23 Score=180.64 Aligned_cols=192 Identities=18% Similarity=0.254 Sum_probs=143.4
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-cc
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LH 83 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~ 83 (297)
++||+|||+|.||.+||.+|+++||+|++|||++++.+.+ .+.|. +..+++++ ++
T Consensus 3 M~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l-----------~~~Ga-------------~~a~s~~e~~~ 58 (300)
T 3obb_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGL-----------VAAGA-------------SAARSARDAVQ 58 (300)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHH-----------HHTTC-------------EECSSHHHHHT
T ss_pred cCEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHH-----------HHcCC-------------EEcCCHHHHHh
Confidence 5799999999999999999999999999999999988876 55664 56777777 78
Q ss_pred CCcEEEEecccCHHHHHHHHHH--HHhhccCCeEEe-ecCCCccH-HHHhhhcCCCCeEEEeecCCCCCCC-------cc
Q 022407 84 SADIIVEAIVESEDVKKKLFSE--LDKITKASAILA-SNTSSISI-TRLASATSRPCQVIGMHFMNPPPLM-------KL 152 (297)
Q Consensus 84 ~aD~Vi~~v~e~~~~k~~~~~~--l~~~~~~~~ii~-s~ts~~~~-~~l~~~~~~~~~~~g~h~~~p~~~~-------~~ 152 (297)
+||+||.|+|++..++..++.. +.+.++++.+++ ++|+++.. .++++.+.. .|.+|++.|-.. +.
T Consensus 59 ~~dvv~~~l~~~~~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~----~G~~~lDaPVsGg~~~A~~G~ 134 (300)
T 3obb_A 59 GADVVISMLPASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARE----RGLAMLDAPVSGGTAGAAAGT 134 (300)
T ss_dssp TCSEEEECCSCHHHHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHT----TTCEEEECCEESCHHHHHHTC
T ss_pred cCCceeecCCchHHHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHH----cCCEEEecCCCCCHHHHHhCC
Confidence 9999999999988876655543 455556666555 44444433 456665532 245666665211 12
Q ss_pred eeEecCCCChHHHHHHHHHHHHHhCCeEEEeccc-hh---hhHHHHHH----HHHHHHHHHHHcCCCCHHHHHHHHhhcc
Q 022407 153 VEVIRGADTSDETFRATKALAERFGKTVVCSQDY-AG---FIVNRILM----PMINEAFFTLYTGVATKEDIDAGMKLGT 224 (297)
Q Consensus 153 vev~~~~~~~~~~~~~~~~l~~~lG~~~v~~~d~-~g---~i~nri~~----~~~~Ea~~l~~~g~~~~~~id~a~~~g~ 224 (297)
+.++.+ ++++++++++++|+.+|++++++++. .| .++|+++. ..+.|++.++++.+++++.+-.++..+.
T Consensus 135 L~imvG--G~~~~~~~~~p~l~~~g~~i~~~G~~G~g~~~Kl~~N~l~~~~~~a~aEa~~la~~~Gld~~~~~~vl~~~~ 212 (300)
T 3obb_A 135 LTFMVG--GDAEALEKARPLFEAMGRNIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEIMRRSS 212 (300)
T ss_dssp EEEEEE--SCHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTST
T ss_pred EEEEEe--CCHHHHHHHHHHHHHhCCCEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhCc
Confidence 445555 78999999999999999999999863 23 36777664 3578999999998899999988887665
Q ss_pred CC
Q 022407 225 NQ 226 (297)
Q Consensus 225 g~ 226 (297)
+.
T Consensus 213 ~~ 214 (300)
T 3obb_A 213 GG 214 (300)
T ss_dssp TC
T ss_pred cc
Confidence 43
No 15
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.88 E-value=7.8e-22 Score=169.51 Aligned_cols=212 Identities=13% Similarity=0.107 Sum_probs=155.1
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCc-EEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-cc
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLD-VWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LH 83 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~-V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~ 83 (297)
++|+|||+|.||..+|..|+++|++ |.+||+++++++.+.+. .| +...+++++ ++
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~----------~g-------------~~~~~~~~~~~~ 67 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQK----------VE-------------AEYTTDLAEVNP 67 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHH----------TT-------------CEEESCGGGSCS
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHH----------cC-------------CceeCCHHHHhc
Confidence 6899999999999999999999999 99999999887665211 12 245667765 78
Q ss_pred CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHHHHhhhcCCCCeEEEeecCCCC-----CCCcceeEecC
Q 022407 84 SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPP-----PLMKLVEVIRG 158 (297)
Q Consensus 84 ~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~~l~~~~~~~~~~~g~h~~~p~-----~~~~~vev~~~ 158 (297)
+||+||+|+|++. ..+++.++.+.+++++++++++++++.+.+++.+..+ -..|++.|. ...+...++.
T Consensus 68 ~~Dvvi~av~~~~--~~~v~~~l~~~~~~~~ivv~~s~~~~~~~l~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~v- 141 (266)
T 3d1l_A 68 YAKLYIVSLKDSA--FAELLQGIVEGKREEALMVHTAGSIPMNVWEGHVPHY---GVFYPMQTFSKQREVDFKEIPFFI- 141 (266)
T ss_dssp CCSEEEECCCHHH--HHHHHHHHHTTCCTTCEEEECCTTSCGGGSTTTCSSE---EEEEECCCC---CCCCCTTCCEEE-
T ss_pred CCCEEEEecCHHH--HHHHHHHHHhhcCCCcEEEECCCCCchHHHHHHHHhc---cCcCCceecCCCchhhcCCCeEEE-
Confidence 9999999999774 3678888888888899999999998887776655431 225666541 1223333333
Q ss_pred CCChHHHHHHHHHHHHHhCCeEEEeccc--hhh-----hHHHHH--HHHHHHHHHHHHcCCCCHHHH--------HHHHh
Q 022407 159 ADTSDETFRATKALAERFGKTVVCSQDY--AGF-----IVNRIL--MPMINEAFFTLYTGVATKEDI--------DAGMK 221 (297)
Q Consensus 159 ~~~~~~~~~~~~~l~~~lG~~~v~~~d~--~g~-----i~nri~--~~~~~Ea~~l~~~g~~~~~~i--------d~a~~ 221 (297)
.+++++.++.+.++++.+|++++++++. +++ +++++. ...+.|+ ++++.+.+++++ +..++
T Consensus 142 ~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ea--l~~~~Gl~~~~~~~l~~~~~~~~~~ 219 (266)
T 3d1l_A 142 EASSTEDAAFLKAIASTLSNRVYDADSEQRKSLHLAAVFTCNFTNHMYALAAE--LLKKYNLPFDVMLPLIDETARKVHE 219 (266)
T ss_dssp EESSHHHHHHHHHHHHTTCSCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHTTCCGGGGHHHHHHHHHHHHH
T ss_pred ecCCHHHHHHHHHHHHhcCCcEEEeCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHcCCCHHHHHHHHHHHHHHHHh
Confidence 2368899999999999999999988754 345 777776 3445565 445444577777 34444
Q ss_pred hcc-CCCccHHHHHHhhchHHHHHHHHH
Q 022407 222 LGT-NQPMGPLQLADFIGLDVCLSIMKV 248 (297)
Q Consensus 222 ~g~-g~~~Gp~~~~D~~Gl~~~~~~~~~ 248 (297)
.+. +.+.||+...|..+++.+...++.
T Consensus 220 ~~~~~~~~GP~~r~d~~~l~~~l~~l~~ 247 (266)
T 3d1l_A 220 LEPKTAQTGPAIRYDENVIGNHLRMLAD 247 (266)
T ss_dssp SCHHHHCCSTTTTTCHHHHHHHHHHTTT
T ss_pred cChhhhCCCCCccCCHHHHHHHHHHHhc
Confidence 443 457899999999999998887753
No 16
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=99.88 E-value=7.3e-23 Score=180.24 Aligned_cols=201 Identities=20% Similarity=0.270 Sum_probs=157.9
Q ss_pred CCCCCcEEEEECCChhHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCc
Q 022407 1 MEEKMKVMGVVGSGQMGSGIAQLGVMDGL-DVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNL 79 (297)
Q Consensus 1 M~~~~~~V~iiG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 79 (297)
|.+ .+||+|||+|.||.++|..|+.+|+ +|++||+++++++.....+.+... ......+++.++++
T Consensus 1 M~~-~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~------------~~~~~~~i~~t~d~ 67 (317)
T 2ewd_A 1 MIE-RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMV------------MFGSTSKVIGTDDY 67 (317)
T ss_dssp CCC-CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHH------------HHTCCCCEEEESCG
T ss_pred CCC-CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhh------------hcCCCcEEEECCCH
Confidence 543 3689999999999999999999999 999999999877753222221110 00123456777788
Q ss_pred ccccCCcEEEEec--------------ccCHHHHHHHHHHHHhhccCCeEE--eecCCCccHHHHhhhcCC-CCeEEEee
Q 022407 80 KDLHSADIIVEAI--------------VESEDVKKKLFSELDKITKASAIL--ASNTSSISITRLASATSR-PCQVIGMH 142 (297)
Q Consensus 80 ~~~~~aD~Vi~~v--------------~e~~~~k~~~~~~l~~~~~~~~ii--~s~ts~~~~~~l~~~~~~-~~~~~g~h 142 (297)
+++++||+||+++ +++..+++++++++.++++ ++++ +||++++....+++.... +.|++|+
T Consensus 68 ~a~~~aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~-~~iii~~sNp~~~~~~~~~~~~~~~~~rviG~- 145 (317)
T 2ewd_A 68 ADISGSDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCP-NAFVICITNPLDVMVSHFQKVSGLPHNKVCGM- 145 (317)
T ss_dssp GGGTTCSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCT-TSEEEECCSSHHHHHHHHHHHHCCCGGGEEES-
T ss_pred HHhCCCCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCC-CcEEEEeCChHHHHHHHHHHhhCCCHHHEEec-
Confidence 7799999999999 7788889999999999976 7766 577666666677776655 5677654
Q ss_pred cCCCCCCCcceeEecCCCChHHHHHHHHHHHHHhCCeEEEeccchhhhHHH---HHHHHHHHH-------HHHHHcCCCC
Q 022407 143 FMNPPPLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQDYAGFIVNR---ILMPMINEA-------FFTLYTGVAT 212 (297)
Q Consensus 143 ~~~p~~~~~~vev~~~~~~~~~~~~~~~~l~~~lG~~~v~~~d~~g~i~nr---i~~~~~~Ea-------~~l~~~g~~~ 212 (297)
.|..+.......+.+.+|+. .++.+||++++ .++++++++ ..++++|.++
T Consensus 146 -----------------~t~ld~~r~~~~la~~lg~~---~~~v~~~v~g~Hg~~~~~~~~~a~v~g~~~~~~~~~g~~~ 205 (317)
T 2ewd_A 146 -----------------AGVLDSSRFRTFIAQHFGVN---ASDVSANVIGGHGDGMVPATSSVSVGGVPLSSFIKQGLIT 205 (317)
T ss_dssp -----------------CHHHHHHHHHHHHHHHHTSC---GGGEECCEEBCSSTTCEECGGGCEETTEEHHHHHHTTSSC
T ss_pred -----------------cCcHHHHHHHHHHHHHhCcC---hhhceEEEEecCCCceeEEeeccccCCEEHHHHHhccCCC
Confidence 36778888888888999987 47888999999 888999998 8999999899
Q ss_pred HHHHHHHHhhccCCCccHHHHHHhhch
Q 022407 213 KEDIDAGMKLGTNQPMGPLQLADFIGL 239 (297)
Q Consensus 213 ~~~id~a~~~g~g~~~Gp~~~~D~~Gl 239 (297)
.+++|.+++.+ ++||++++|..|.
T Consensus 206 ~~~id~~~~~~---~~~~~ei~~~~g~ 229 (317)
T 2ewd_A 206 QEQIDEIVCHT---RIAWKEVADNLKT 229 (317)
T ss_dssp HHHHHHHHHHH---HHHHHHHHHHHSS
T ss_pred HHHHHHHHHHH---HhhHHHHHHhhcC
Confidence 99999998854 7899999998776
No 17
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.88 E-value=3.2e-22 Score=174.32 Aligned_cols=191 Identities=17% Similarity=0.234 Sum_probs=135.6
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
+||+|||+|.||.+||.+|+++||+|++|||++++.+.+ .+.|. +..+++.+ ++.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l-----------~~~G~-------------~~~~s~~e~~~~ 61 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPL-----------TKLGA-------------TVVENAIDAITP 61 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTT-----------TTTTC-------------EECSSGGGGCCT
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-----------HHcCC-------------eEeCCHHHHHhc
Confidence 589999999999999999999999999999999887654 33443 56677776 889
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEe-ecCCCccH-HHHhhhcCCCCeEEEeecCCCCCCC-------cceeE
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILA-SNTSSISI-TRLASATSRPCQVIGMHFMNPPPLM-------KLVEV 155 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~-s~ts~~~~-~~l~~~~~~~~~~~g~h~~~p~~~~-------~~vev 155 (297)
||+||.|+|++..+...+...+....+++.+++ ++|+++.. .++++.+.. .|.+|++.|-.. +...+
T Consensus 62 ~dvvi~~l~~~~~~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~----~g~~~ldapVsGg~~~a~~g~l~i 137 (297)
T 4gbj_A 62 GGIVFSVLADDAAVEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEW----YGAHYVGAPIFARPEAVRAKVGNI 137 (297)
T ss_dssp TCEEEECCSSHHHHHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHH----TTCEEEECCEECCHHHHHHTCCEE
T ss_pred CCceeeeccchhhHHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHh----cCCceecCCcCCCcccccccccee
Confidence 999999999888777666677777777776655 44443333 355554421 134555544211 12345
Q ss_pred ecCCCChHHHHHHHHHHHHHhCCeEEEeccchh-----hhHHHHHH----HHHHHHHHHHHcCCCCHHHHHHHHhhccCC
Q 022407 156 IRGADTSDETFRATKALAERFGKTVVCSQDYAG-----FIVNRILM----PMINEAFFTLYTGVATKEDIDAGMKLGTNQ 226 (297)
Q Consensus 156 ~~~~~~~~~~~~~~~~l~~~lG~~~v~~~d~~g-----~i~nri~~----~~~~Ea~~l~~~g~~~~~~id~a~~~g~g~ 226 (297)
+.+ ++++++++++++|+.+|++++++++.+| .++|+++. ..++|++.++++.+++++.+-.++..+.+.
T Consensus 138 m~g--G~~~~~~~~~~~l~~~g~~i~~~g~~~G~g~~~Kl~~N~~~~~~~~~~aEa~~la~~~Gld~~~~~~~l~~~~~~ 215 (297)
T 4gbj_A 138 CLS--GNAGAKERIKPIVENFVKGVFDFGDDPGAANVIKLAGNFMIACSLEMMGEAFTMAEKNGISRQSIYEMLTSTLFA 215 (297)
T ss_dssp EEE--ECHHHHHHHHHHHHTTCSEEEECCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTTTC
T ss_pred ecc--cchhHHHHHHHHHHHhhCCeEEecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhccc
Confidence 554 7899999999999999999999986554 36677664 467899999999889999988888766543
No 18
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.88 E-value=2.8e-22 Score=175.46 Aligned_cols=194 Identities=16% Similarity=0.206 Sum_probs=138.1
Q ss_pred CCcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-c
Q 022407 4 KMKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-L 82 (297)
Q Consensus 4 ~~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~ 82 (297)
+++||+|||+|.||.+||..|+++|++|++||+++++++.+ .+.| +...+++++ +
T Consensus 2 ~m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~-----------~~~g-------------~~~~~~~~~~~ 57 (302)
T 2h78_A 2 HMKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGL-----------VAAG-------------ASAARSARDAV 57 (302)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHH-----------HHTT-------------CEECSSHHHHH
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHH-----------HHCC-------------CeEcCCHHHHH
Confidence 35799999999999999999999999999999999987765 3333 246667766 7
Q ss_pred cCCcEEEEecccCHHHHHHHHH--HHHhhccCCeEEeecCCCccH--HHHhhhcCC-CCeEEEeecCCCCCC----Ccce
Q 022407 83 HSADIIVEAIVESEDVKKKLFS--ELDKITKASAILASNTSSISI--TRLASATSR-PCQVIGMHFMNPPPL----MKLV 153 (297)
Q Consensus 83 ~~aD~Vi~~v~e~~~~k~~~~~--~l~~~~~~~~ii~s~ts~~~~--~~l~~~~~~-~~~~~g~h~~~p~~~----~~~v 153 (297)
++||+||+|+|++..++..+.. ++.+.++++++|++.++..+. ..+.+.+.. ..+++.. ++.+... ..+.
T Consensus 58 ~~aDvvi~~vp~~~~~~~v~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~~~~~~-pv~~~~~~~~~g~l~ 136 (302)
T 2h78_A 58 QGADVVISMLPASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDA-PVSGGTAGAAAGTLT 136 (302)
T ss_dssp TTCSEEEECCSCHHHHHHHHHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTCCEEEC-CEESCHHHHHHTCEE
T ss_pred hCCCeEEEECCCHHHHHHHHcCchhHHhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCEEEEE-EccCChhhHhcCCce
Confidence 8999999999987766554431 566677777777644333332 345554432 2344442 2222110 1122
Q ss_pred eEecCCCChHHHHHHHHHHHHHhCCeEEEecc-chhh---hHHHHHHH----HHHHHHHHHHcCCCCHHHHHHHHhhccC
Q 022407 154 EVIRGADTSDETFRATKALAERFGKTVVCSQD-YAGF---IVNRILMP----MINEAFFTLYTGVATKEDIDAGMKLGTN 225 (297)
Q Consensus 154 ev~~~~~~~~~~~~~~~~l~~~lG~~~v~~~d-~~g~---i~nri~~~----~~~Ea~~l~~~g~~~~~~id~a~~~g~g 225 (297)
.++. ++++.+++++++++.+|++++++++ ..+. ++|+++.. +++|++.++++.++++++++.++..+.+
T Consensus 137 ~~~~---g~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~ 213 (302)
T 2h78_A 137 FMVG---GDAEALEKARPLFEAMGRNIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEIMRRSSG 213 (302)
T ss_dssp EEEE---SCHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTT
T ss_pred EEeC---CCHHHHHHHHHHHHHhCCCeEEcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCC
Confidence 3332 5799999999999999999998876 2333 46776654 7899999999999999999999887654
No 19
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=99.87 E-value=1.2e-20 Score=163.25 Aligned_cols=151 Identities=14% Similarity=0.221 Sum_probs=127.8
Q ss_pred cEEEEECCChhHHHHHHHHHHCCC---cEEEEeCCHHHHHHHHHHHHHHHHHHHHc-CCCChhhhcccCCceEEecCccc
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGL---DVWLVDTDPDALVRATKSISSSIQKFVSK-GQLSQAMGTDAPRRLRCTSNLKD 81 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~---~V~~~d~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~i~~~~~~~~ 81 (297)
+||+|||+|.||.+|+..|+++|+ +|++||+++++++.+. +. | +..+++..+
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~-----------~~~g-------------i~~~~~~~~ 59 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFK-----------EKCG-------------VHTTQDNRQ 59 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHH-----------HTTC-------------CEEESCHHH
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHH-----------HHcC-------------CEEeCChHH
Confidence 689999999999999999999999 9999999999877662 22 2 245556554
Q ss_pred -ccCCcEEEEecccCHHHHHHHHHHHHhh-ccCCeEEeecCCCccHHHHhhhcCCCCeEEEeecCCCCCCCccee-EecC
Q 022407 82 -LHSADIIVEAIVESEDVKKKLFSELDKI-TKASAILASNTSSISITRLASATSRPCQVIGMHFMNPPPLMKLVE-VIRG 158 (297)
Q Consensus 82 -~~~aD~Vi~~v~e~~~~k~~~~~~l~~~-~~~~~ii~s~ts~~~~~~l~~~~~~~~~~~g~h~~~p~~~~~~ve-v~~~ 158 (297)
+++||+||+|+|. +....++.++.+. ++++++|+|++++++++.+.+.++.+.++++.||+.|......++ ++++
T Consensus 60 ~~~~aDvVilav~p--~~~~~vl~~l~~~~l~~~~iiiS~~agi~~~~l~~~l~~~~~vvr~mPn~p~~v~~g~~~l~~~ 137 (280)
T 3tri_A 60 GALNADVVVLAVKP--HQIKMVCEELKDILSETKILVISLAVGVTTPLIEKWLGKASRIVRAMPNTPSSVRAGATGLFAN 137 (280)
T ss_dssp HHSSCSEEEECSCG--GGHHHHHHHHHHHHHTTTCEEEECCTTCCHHHHHHHHTCCSSEEEEECCGGGGGTCEEEEEECC
T ss_pred HHhcCCeEEEEeCH--HHHHHHHHHHHhhccCCCeEEEEecCCCCHHHHHHHcCCCCeEEEEecCChHHhcCccEEEEeC
Confidence 8899999999975 4477899999988 888889999999999999999888778999999998887666554 5677
Q ss_pred CCChHHHHHHHHHHHHHhCCeEEE
Q 022407 159 ADTSDETFRATKALAERFGKTVVC 182 (297)
Q Consensus 159 ~~~~~~~~~~~~~l~~~lG~~~v~ 182 (297)
..++++.++.++++|+.+|+.+++
T Consensus 138 ~~~~~~~~~~v~~l~~~iG~~~~v 161 (280)
T 3tri_A 138 ETVDKDQKNLAESIMRAVGLVIWV 161 (280)
T ss_dssp TTSCHHHHHHHHHHHGGGEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHCCCeEEE
Confidence 888999999999999999985544
No 20
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.85 E-value=9.2e-21 Score=165.88 Aligned_cols=197 Identities=18% Similarity=0.273 Sum_probs=137.6
Q ss_pred CCcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-c
Q 022407 4 KMKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-L 82 (297)
Q Consensus 4 ~~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~ 82 (297)
+.+||+|||+|.||.+||..|+++|++|++||+++++++.+ .+.|.. ..++++++ +
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~-----------~~~g~~------------~~~~~~~e~~ 62 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANL-----------LAEGAC------------GAAASAREFA 62 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-----------HHTTCS------------EEESSSTTTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHH-----------HHcCCc------------cccCCHHHHH
Confidence 45789999999999999999999999999999999988776 334431 22566666 7
Q ss_pred cCCcEEEEecccCHHHHHHHH--HHHHhhccCCeEEeecCCCccH--HHHhhhcC-CCCeEEEeecCC-CCC--CCccee
Q 022407 83 HSADIIVEAIVESEDVKKKLF--SELDKITKASAILASNTSSISI--TRLASATS-RPCQVIGMHFMN-PPP--LMKLVE 154 (297)
Q Consensus 83 ~~aD~Vi~~v~e~~~~k~~~~--~~l~~~~~~~~ii~s~ts~~~~--~~l~~~~~-~~~~~~g~h~~~-p~~--~~~~ve 154 (297)
++||+||+|+|++..++..++ +++.+.++++++|+..++..+. ..+.+.+. ....++. +++. .|. ..+.+.
T Consensus 63 ~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~-~pv~g~~~~a~~g~l~ 141 (303)
T 3g0o_A 63 GVVDALVILVVNAAQVRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLNMLD-APVSGGAVKAAQGEMT 141 (303)
T ss_dssp TTCSEEEECCSSHHHHHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEE-CCEESCHHHHHTTCEE
T ss_pred hcCCEEEEECCCHHHHHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCeEEe-CCCCCChhhhhcCCeE
Confidence 899999999998776655444 5577777788777644333222 34444442 2334444 3321 110 011223
Q ss_pred EecCCCChHHHHHHHHHHHHHhCCeEEEeccchh--h---hHHHHH----HHHHHHHHHHHHcCCCCHHHHHHHHhhccC
Q 022407 155 VIRGADTSDETFRATKALAERFGKTVVCSQDYAG--F---IVNRIL----MPMINEAFFTLYTGVATKEDIDAGMKLGTN 225 (297)
Q Consensus 155 v~~~~~~~~~~~~~~~~l~~~lG~~~v~~~d~~g--~---i~nri~----~~~~~Ea~~l~~~g~~~~~~id~a~~~g~g 225 (297)
++.+ ++++++++++++++.+|++++++++.+| . ++|+++ ...++|++.++++.+++++++..++..+.+
T Consensus 142 ~~~g--g~~~~~~~~~~ll~~~g~~~~~~~~~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~~ 219 (303)
T 3g0o_A 142 VMAS--GSEAAFTRLKPVLDAVASNVYRISDTPGAGSTVKIIHQLLAGVHIAAAAEAMALAARAGIPLDVMYDVVTHAAG 219 (303)
T ss_dssp EEEE--CCHHHHHHHHHHHHHHEEEEEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTT
T ss_pred EEeC--CCHHHHHHHHHHHHHHCCCEEECCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhccc
Confidence 3333 5789999999999999999999886333 2 445544 346899999999988999999999887654
Q ss_pred C
Q 022407 226 Q 226 (297)
Q Consensus 226 ~ 226 (297)
.
T Consensus 220 ~ 220 (303)
T 3g0o_A 220 N 220 (303)
T ss_dssp C
T ss_pred C
Confidence 3
No 21
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=99.85 E-value=6.1e-20 Score=156.00 Aligned_cols=190 Identities=17% Similarity=0.226 Sum_probs=139.8
Q ss_pred cEEEEECCChhHHHHHHHHHHCCC----cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGL----DVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD 81 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~----~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 81 (297)
+||+|||+|.||.+|+..|+++|+ +|++||+++++++.+.+. .| +...++.++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~----------~g-------------~~~~~~~~e 59 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEK----------YG-------------LTTTTDNNE 59 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHH----------HC-------------CEECSCHHH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHH----------hC-------------CEEeCChHH
Confidence 589999999999999999999999 999999999987765221 12 245666655
Q ss_pred -ccCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHHHHhhhcCCCCeEEEeecCCCCCCCc-ceeEecCC
Q 022407 82 -LHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPPPLMK-LVEVIRGA 159 (297)
Q Consensus 82 -~~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~~l~~~~~~~~~~~g~h~~~p~~~~~-~vev~~~~ 159 (297)
+++||+||+|++.. ..+.++.++.+.++++++++|.+++++.+.+.+.++.+.++++.||..|..... ...++.+.
T Consensus 60 ~~~~aDvVilav~~~--~~~~v~~~l~~~l~~~~~vvs~~~gi~~~~l~~~~~~~~~~v~~~p~~p~~~~~g~~~~~~~~ 137 (247)
T 3gt0_A 60 VAKNADILILSIKPD--LYASIINEIKEIIKNDAIIVTIAAGKSIESTENAFNKKVKVVRVMPNTPALVGEGMSALCPNE 137 (247)
T ss_dssp HHHHCSEEEECSCTT--THHHHC---CCSSCTTCEEEECSCCSCHHHHHHHHCSCCEEEEEECCGGGGGTCEEEEEEECT
T ss_pred HHHhCCEEEEEeCHH--HHHHHHHHHHhhcCCCCEEEEecCCCCHHHHHHHhCCCCcEEEEeCChHHHHcCceEEEEeCC
Confidence 78999999999643 366788888888888999999999999998888887777899999988876554 57788888
Q ss_pred CChHHHHHHHHHHHHHhCCeEEEeccchhh----hHH--HHHHHHHHHHHHH-HHcCCCCHHHHHHHHh
Q 022407 160 DTSDETFRATKALAERFGKTVVCSQDYAGF----IVN--RILMPMINEAFFT-LYTGVATKEDIDAGMK 221 (297)
Q Consensus 160 ~~~~~~~~~~~~l~~~lG~~~v~~~d~~g~----i~n--ri~~~~~~Ea~~l-~~~g~~~~~~id~a~~ 221 (297)
.++++.++.++++|+.+|+ ++++.+..-. +.. ..+...+.|++.. ..+.+.++++...++.
T Consensus 138 ~~~~~~~~~~~~l~~~~G~-~~~~~e~~~d~~~a~~g~gpa~~~~~~eal~~a~~~~Gl~~~~a~~~~~ 205 (247)
T 3gt0_A 138 MVTEKDLEDVLNIFNSFGQ-TEIVSEKLMDVVTSVSGSSPAYVYMIIEAMADAAVLDGMPRNQAYKFAA 205 (247)
T ss_dssp TCCHHHHHHHHHHHGGGEE-EEECCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhCCC-EEEeCHHHccHHHHHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 8999999999999999999 5555332110 010 0112334555544 4444567777666554
No 22
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.85 E-value=1.1e-20 Score=164.87 Aligned_cols=191 Identities=16% Similarity=0.213 Sum_probs=133.8
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-cc
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LH 83 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~ 83 (297)
.+||+|||+|.||.+||..|+++||+|++||+++++++.+ .+.| ++.++++++ ++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~-----------~~~g-------------~~~~~~~~~~~~ 70 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPL-----------AEAG-------------ATLADSVADVAA 70 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHH-----------HHTT-------------CEECSSHHHHTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-----------HHCC-------------CEEcCCHHHHHh
Confidence 3689999999999999999999999999999999987765 3333 356777777 66
Q ss_pred CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccH--HHHhhhcCC-CCeEEEeecCCCCCC--CcceeEecC
Q 022407 84 SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISI--TRLASATSR-PCQVIGMHFMNPPPL--MKLVEVIRG 158 (297)
Q Consensus 84 ~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~--~~l~~~~~~-~~~~~g~h~~~p~~~--~~~vev~~~ 158 (297)
||+||+|+|++..++ .++.++.+.++++++|+..++..+. .++.+.+.. ..+++....+.++.. .+.+.++.+
T Consensus 71 -aDvvi~~vp~~~~~~-~v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~~g 148 (296)
T 3qha_A 71 -ADLIHITVLDDAQVR-EVVGELAGHAKPGTVIAIHSTISDTTAVELARDLKARDIHIVDAPVSGGAAAAARGELATMVG 148 (296)
T ss_dssp -SSEEEECCSSHHHHH-HHHHHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEEEECCEESCHHHHHHTCEEEEEE
T ss_pred -CCEEEEECCChHHHH-HHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEEEeCCCcCCHHHHhcCCccEEec
Confidence 999999999876654 4557888888888777644433222 345544422 233433222222110 011223333
Q ss_pred CCChHHHHHHHHHHHHHhCCeEEEeccc-hhh---hHHHHHH----HHHHHHHHHHHcCCCCHHHH------HHHHhhc
Q 022407 159 ADTSDETFRATKALAERFGKTVVCSQDY-AGF---IVNRILM----PMINEAFFTLYTGVATKEDI------DAGMKLG 223 (297)
Q Consensus 159 ~~~~~~~~~~~~~l~~~lG~~~v~~~d~-~g~---i~nri~~----~~~~Ea~~l~~~g~~~~~~i------d~a~~~g 223 (297)
++++++++++++++.+|++++++++. .+. ++++++. ..++|++.++++.+++++++ ..++..+
T Consensus 149 --g~~~~~~~~~~ll~~~g~~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~~~~i~~~ 225 (296)
T 3qha_A 149 --ADREVYERIKPAFKHWAAVVIHAGEPGAGTRMKLARNMLTFTSYAAACEAMKLAEAAGLDLQALGRVVRHTDALTGG 225 (296)
T ss_dssp --CCHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHCC
T ss_pred --CCHHHHHHHHHHHHHHcCCeEEcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhhcchHHHHhcC
Confidence 47899999999999999999998762 221 4555443 45899999999988999999 8887643
No 23
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.84 E-value=1.4e-20 Score=163.54 Aligned_cols=193 Identities=13% Similarity=0.163 Sum_probs=137.6
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
+||+|||+|.||.++|..|+++||+|++||+++++++.+ .+.| +...+++++ +++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~-----------~~~g-------------~~~~~~~~~~~~~ 57 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEEL-----------AALG-------------AERAATPCEVVES 57 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHH-----------HHTT-------------CEECSSHHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHH-----------HHCC-------------CeecCCHHHHHhc
Confidence 589999999999999999999999999999999987765 3333 256677776 789
Q ss_pred CcEEEEecccCHHHHHHHH--HHHHhhccCCeEEeecCCCccH---HHHhhhcC-CCCeEEEeecCCC-CCC--CcceeE
Q 022407 85 ADIIVEAIVESEDVKKKLF--SELDKITKASAILASNTSSISI---TRLASATS-RPCQVIGMHFMNP-PPL--MKLVEV 155 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~--~~l~~~~~~~~ii~s~ts~~~~---~~l~~~~~-~~~~~~g~h~~~p-~~~--~~~vev 155 (297)
||+||+|+|++..++..++ .++.+.++++++++..+ +.++ ..+.+.+. ...+++. |++.. +.. .+.+.+
T Consensus 58 aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vi~~s-t~~~~~~~~~~~~~~~~g~~~~~-~pv~g~~~~a~~g~l~~ 135 (287)
T 3pef_A 58 CPVTFAMLADPAAAEEVCFGKHGVLEGIGEGRGYVDMS-TVDPATSQRIGVAVVAKGGRFLE-APVSGSKKPAEDGTLII 135 (287)
T ss_dssp CSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECS-CCCHHHHHHHHHHHHHTTCEEEE-CCEECCHHHHHHTCEEE
T ss_pred CCEEEEEcCCHHHHHHHHcCcchHhhcCCCCCEEEeCC-CCCHHHHHHHHHHHHHhCCEEEE-CCCcCCHHHHhcCCEEE
Confidence 9999999998777665554 66778888887776443 3333 23444332 2234444 33221 110 011223
Q ss_pred ecCCCChHHHHHHHHHHHHHhCCeEEEeccc-hhh---hHHHHHH----HHHHHHHHHHHcCCCCHHHHHHHHhhccCC
Q 022407 156 IRGADTSDETFRATKALAERFGKTVVCSQDY-AGF---IVNRILM----PMINEAFFTLYTGVATKEDIDAGMKLGTNQ 226 (297)
Q Consensus 156 ~~~~~~~~~~~~~~~~l~~~lG~~~v~~~d~-~g~---i~nri~~----~~~~Ea~~l~~~g~~~~~~id~a~~~g~g~ 226 (297)
+.+ ++++++++++++++.+|++++++++. .+. ++++++. ..++|++.++++.+++++++..++..+.+.
T Consensus 136 ~~g--g~~~~~~~~~~ll~~~g~~~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~~~~~ 212 (287)
T 3pef_A 136 LAA--GDRNLYDEAMPGFEKMGKKIIHLGDVGKGAEMKLVVNMVMGGMMACFCEGLALGEKAGLATDAILDVIGAGAMA 212 (287)
T ss_dssp EEE--ECHHHHHHHHHHHHHHEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHSTTC
T ss_pred EEe--CCHHHHHHHHHHHHHhCCCeEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcccc
Confidence 333 57899999999999999999998762 222 4555554 378999999999889999999998876543
No 24
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.84 E-value=1.9e-20 Score=164.38 Aligned_cols=196 Identities=10% Similarity=0.137 Sum_probs=135.8
Q ss_pred CCcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-c
Q 022407 4 KMKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-L 82 (297)
Q Consensus 4 ~~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~ 82 (297)
.++||+|||+|.||.+||..|+++||+|++||+++++++.+ .+.| +...+++++ +
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l-----------~~~g-------------~~~~~~~~~~~ 75 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDEL-----------VEHG-------------ASVCESPAEVI 75 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHH-----------HHTT-------------CEECSSHHHHH
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-----------HHCC-------------CeEcCCHHHHH
Confidence 35799999999999999999999999999999999987765 3333 246667766 7
Q ss_pred cCCcEEEEecccCHHHHHHHH--HHHHhhccCCeEEeecCCCcc-H-HHHhhhcC-CCCeEEEeecCC-CCCC--Cccee
Q 022407 83 HSADIIVEAIVESEDVKKKLF--SELDKITKASAILASNTSSIS-I-TRLASATS-RPCQVIGMHFMN-PPPL--MKLVE 154 (297)
Q Consensus 83 ~~aD~Vi~~v~e~~~~k~~~~--~~l~~~~~~~~ii~s~ts~~~-~-~~l~~~~~-~~~~~~g~h~~~-p~~~--~~~ve 154 (297)
++||+||+|+|++..++..++ .++.+.++++++|+..++..+ . ..+.+.+. ...+++. +++. .+.. .+...
T Consensus 76 ~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~v~-~pv~g~~~~a~~g~l~ 154 (310)
T 3doj_A 76 KKCKYTIAMLSDPCAALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVE-GPVSGSKKPAEDGQLI 154 (310)
T ss_dssp HHCSEEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE-CCEECCHHHHHHTCEE
T ss_pred HhCCEEEEEcCCHHHHHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEe-CCCCCChhHHhcCCeE
Confidence 899999999998777665444 556677777777764433222 2 34444332 2233433 2211 1100 01122
Q ss_pred EecCCCChHHHHHHHHHHHHHhCCeEEEeccc-hhh---hHHHHH----HHHHHHHHHHHHcCCCCHHHHHHHHhhccCC
Q 022407 155 VIRGADTSDETFRATKALAERFGKTVVCSQDY-AGF---IVNRIL----MPMINEAFFTLYTGVATKEDIDAGMKLGTNQ 226 (297)
Q Consensus 155 v~~~~~~~~~~~~~~~~l~~~lG~~~v~~~d~-~g~---i~nri~----~~~~~Ea~~l~~~g~~~~~~id~a~~~g~g~ 226 (297)
++.+ ++++++++++++++.+|++++++++. .+. ++++++ ...++|++.++++.+++++++..++..+.+.
T Consensus 155 i~~g--g~~~~~~~~~~ll~~~g~~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~~~ 232 (310)
T 3doj_A 155 ILAA--GDKALFEESIPAFDVLGKRSFYLGQVGNGAKMKLIVNMIMGSMMNAFSEGLVLADKSGLSSDTLLDILDLGAMT 232 (310)
T ss_dssp EEEE--ECHHHHHHHHHHHHHHEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHSTTC
T ss_pred EEEc--CCHHHHHHHHHHHHHhCCCEEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcccc
Confidence 3333 46899999999999999999999762 221 444444 3568999999999889999999998876543
No 25
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.83 E-value=6.8e-20 Score=160.53 Aligned_cols=192 Identities=15% Similarity=0.123 Sum_probs=134.7
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-cc
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LH 83 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~ 83 (297)
.+||+|||+|.||.+||..|+++|++|++||+++++++.+ .+.|. ...+++++ ++
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~-----------~~~g~-------------~~~~~~~e~~~ 64 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAAL-----------VAAGA-------------HLCESVKAALS 64 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHH-----------HHHTC-------------EECSSHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----------HHCCC-------------eecCCHHHHHh
Confidence 4789999999999999999999999999999999987765 23332 45666666 78
Q ss_pred CCcEEEEecccCHHHHHHHHH--HHHhhccCCeEEeecCCCccH-HHHhhhcC-CCCeEEEeecCCCCCCC--cceeEec
Q 022407 84 SADIIVEAIVESEDVKKKLFS--ELDKITKASAILASNTSSISI-TRLASATS-RPCQVIGMHFMNPPPLM--KLVEVIR 157 (297)
Q Consensus 84 ~aD~Vi~~v~e~~~~k~~~~~--~l~~~~~~~~ii~s~ts~~~~-~~l~~~~~-~~~~~~g~h~~~p~~~~--~~vev~~ 157 (297)
+||+||+|+|++..++..+ . .+....++..++.++|+.+.. .++.+.+. ...+++....+.+|... +...++.
T Consensus 65 ~aDvVi~~vp~~~~~~~v~-~~~~l~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~~~vdapv~g~~~~~~~~~~~i~~ 143 (306)
T 3l6d_A 65 ASPATIFVLLDNHATHEVL-GMPGVARALAHRTIVDYTTNAQDEGLALQGLVNQAGGHYVKGMIVAYPRNVGHRESHSIH 143 (306)
T ss_dssp HSSEEEECCSSHHHHHHHH-TSTTHHHHTTTCEEEECCCCCTTHHHHHHHHHHHTTCEEEEEEEESCGGGTTCTTCEEEE
T ss_pred cCCEEEEEeCCHHHHHHHh-cccchhhccCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEecccccCcccccCCceEEEE
Confidence 9999999999877655444 4 465554434444444444433 34544432 33456655333322111 1223443
Q ss_pred CCCChHHHHHHHHHHHHHhCCeEEEe--cc--chhhhHHHHH---HHHHHHHHHHHHcCCCCHHHHHHHHhhc
Q 022407 158 GADTSDETFRATKALAERFGKTVVCS--QD--YAGFIVNRIL---MPMINEAFFTLYTGVATKEDIDAGMKLG 223 (297)
Q Consensus 158 ~~~~~~~~~~~~~~l~~~lG~~~v~~--~d--~~g~i~nri~---~~~~~Ea~~l~~~g~~~~~~id~a~~~g 223 (297)
+ ++++++++++++|+.+|.+++++ ++ ..|.+++.++ ...++|++.++++.+++++++..++..+
T Consensus 144 g--g~~~~~~~~~~ll~~lg~~~~~~~~g~~~g~g~~~k~~~~~~~~~~~Ea~~la~~~Gld~~~~~~~~~~~ 214 (306)
T 3l6d_A 144 T--GDREAFEQHRALLEGLAGHTVFLPWDEALAFATVLHAHAFAAMVTFFEAVGAGDRFGLPVSKTARLLLET 214 (306)
T ss_dssp E--ECHHHHHHHHHHHHTTCSEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred c--CCHHHHHHHHHHHHHhcCCEEEecCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHh
Confidence 3 57999999999999998899999 75 4556776333 3578999999999889999988887765
No 26
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.83 E-value=2.2e-20 Score=164.05 Aligned_cols=190 Identities=16% Similarity=0.174 Sum_probs=129.1
Q ss_pred CCCcEEEEECCChhHHHHHHHHHHCCC-cEEEEeCC--HHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCc
Q 022407 3 EKMKVMGVVGSGQMGSGIAQLGVMDGL-DVWLVDTD--PDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNL 79 (297)
Q Consensus 3 ~~~~~V~iiG~G~mG~~iA~~l~~~G~-~V~~~d~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 79 (297)
..++||+|||+|.||.+||..|+++|+ +|++||++ +++.+.+ .+.|. ...+++
T Consensus 22 ~~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~-----------~~~g~-------------~~~~~~ 77 (312)
T 3qsg_A 22 SNAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRA-----------EELGV-------------SCKASV 77 (312)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHH-----------HHTTC-------------EECSCH
T ss_pred CCCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHH-----------HHCCC-------------EEeCCH
Confidence 345799999999999999999999999 99999997 4555543 33332 456676
Q ss_pred cc-ccCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccH--HHHhhhcC-C--CCeEEEeecCCCCCC--Cc
Q 022407 80 KD-LHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISI--TRLASATS-R--PCQVIGMHFMNPPPL--MK 151 (297)
Q Consensus 80 ~~-~~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~--~~l~~~~~-~--~~~~~g~h~~~p~~~--~~ 151 (297)
++ +++||+||+|+|++... +++.++.+.++++++|+..++..+. ..+.+.+. + ..+++....+.|+.. ..
T Consensus 78 ~e~~~~aDvVi~~vp~~~~~--~~~~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~~vd~pv~g~~~~~~g~ 155 (312)
T 3qsg_A 78 AEVAGECDVIFSLVTAQAAL--EVAQQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQYAAVAVMSAVKPHGHR 155 (312)
T ss_dssp HHHHHHCSEEEECSCTTTHH--HHHHHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCEEEEEEECSCSTTTGGG
T ss_pred HHHHhcCCEEEEecCchhHH--HHHHhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCeEEeccccCCchhhcCC
Confidence 66 78999999999988754 3668888888888887755544332 23443332 1 234444323332211 13
Q ss_pred ceeEecCCCChHHHHHHHHHHHHHhCCeEEEeccchh-----hhHHHHHH----HHHHHHHHHHHcCCCCHHHHHHHHhh
Q 022407 152 LVEVIRGADTSDETFRATKALAERFGKTVVCSQDYAG-----FIVNRILM----PMINEAFFTLYTGVATKEDIDAGMKL 222 (297)
Q Consensus 152 ~vev~~~~~~~~~~~~~~~~l~~~lG~~~v~~~d~~g-----~i~nri~~----~~~~Ea~~l~~~g~~~~~~id~a~~~ 222 (297)
+..++.+. ++ ++++++++.+|++++++++.+| .++++++. .+++|++.++++.+++++.++ ++..
T Consensus 156 l~i~vgg~---~~--~~~~~ll~~~g~~~~~~g~~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gld~~~~~-~l~~ 229 (312)
T 3qsg_A 156 VPLVVDGD---GA--RRFQAAFTLYGCRIEVLDGEVGGAALLKMCRSAVLKGLEALFLEALAAAEKMGLADRVLA-SLDA 229 (312)
T ss_dssp SEEEEEST---TH--HHHHHHHHTTTCEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHH-HHHH
T ss_pred EEEEecCC---hH--HHHHHHHHHhCCCeEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHh
Confidence 45555553 22 8899999999999999987444 25566554 678999999999888885444 4544
Q ss_pred cc
Q 022407 223 GT 224 (297)
Q Consensus 223 g~ 224 (297)
+.
T Consensus 230 ~~ 231 (312)
T 3qsg_A 230 SF 231 (312)
T ss_dssp HS
T ss_pred cC
Confidence 43
No 27
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.83 E-value=9e-19 Score=153.66 Aligned_cols=156 Identities=19% Similarity=0.242 Sum_probs=123.7
Q ss_pred CCcEEEEECCChhHHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc
Q 022407 4 KMKVMGVVGSGQMGSGIAQLGVMDGL--DVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD 81 (297)
Q Consensus 4 ~~~~V~iiG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 81 (297)
.++||+|||+|.||.+||..|.++|+ +|++||+++++++.+ .+.|... ...+++++
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a-----------~~~G~~~-----------~~~~~~~~ 89 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKA-----------VDLGIID-----------EGTTSIAK 89 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHH-----------HHTTSCS-----------EEESCTTG
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHH-----------HHCCCcc-----------hhcCCHHH
Confidence 35799999999999999999999999 999999999887765 3445321 24555554
Q ss_pred --ccCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCcc--HHHHhhhcCCCCeEEEeecCCCCCC--------
Q 022407 82 --LHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSIS--ITRLASATSRPCQVIGMHFMNPPPL-------- 149 (297)
Q Consensus 82 --~~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~--~~~l~~~~~~~~~~~g~h~~~p~~~-------- 149 (297)
+++||+||+|+|.+. ...++.++.+.++++++|++.+|.-. .+.+.+.++ .++++.||+.++..
T Consensus 90 ~~~~~aDvVilavp~~~--~~~vl~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~--~~~v~~hPm~G~e~sG~~~A~~ 165 (314)
T 3ggo_A 90 VEDFSPDFVMLSSPVRT--FREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILG--KRFVGGHPIAGTEKSGVEYSLD 165 (314)
T ss_dssp GGGGCCSEEEECSCGGG--HHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHG--GGEECEEECCCCCCCSGGGCCT
T ss_pred HhhccCCEEEEeCCHHH--HHHHHHHHhhccCCCcEEEECCCCcHHHHHHHHHhcC--CCEEecCcccCCcccchhhhhh
Confidence 789999999999765 56788899999999999887665532 356666553 38999999987643
Q ss_pred ----CcceeEecCCCChHHHHHHHHHHHHHhCCeEEEecc
Q 022407 150 ----MKLVEVIRGADTSDETFRATKALAERFGKTVVCSQD 185 (297)
Q Consensus 150 ----~~~vev~~~~~~~~~~~~~~~~l~~~lG~~~v~~~d 185 (297)
...+.++++..++++.+++++++++.+|.++++++.
T Consensus 166 ~Lf~g~~~il~~~~~~~~~~~~~v~~l~~~~G~~v~~~~~ 205 (314)
T 3ggo_A 166 NLYEGKKVILTPTKKTDKKRLKLVKRVWEDVGGVVEYMSP 205 (314)
T ss_dssp TTTTTCEEEECCCTTSCHHHHHHHHHHHHHTTCEEEECCH
T ss_pred hhhcCCEEEEEeCCCCCHHHHHHHHHHHHHcCCEEEEcCH
Confidence 235677777788999999999999999999988754
No 28
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.83 E-value=2.3e-20 Score=162.16 Aligned_cols=195 Identities=14% Similarity=0.166 Sum_probs=135.1
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
+||+|||+|.||.+||..|+++||+|++||+++++++.+. +.| +...+++++ +++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-----------~~g-------------~~~~~~~~~~~~~ 57 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLV-----------ALG-------------ARQASSPAEVCAA 57 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHH-----------HHT-------------CEECSCHHHHHHH
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHH-----------HCC-------------CeecCCHHHHHHc
Confidence 5799999999999999999999999999999999877652 223 246667776 789
Q ss_pred CcEEEEecccCHHHHHHHH--HHHHhhccCCeEEeecCCCcc-H-HHHhhhcC-CCCeEEEeecCCCCCCC--cceeEec
Q 022407 85 ADIIVEAIVESEDVKKKLF--SELDKITKASAILASNTSSIS-I-TRLASATS-RPCQVIGMHFMNPPPLM--KLVEVIR 157 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~--~~l~~~~~~~~ii~s~ts~~~-~-~~l~~~~~-~~~~~~g~h~~~p~~~~--~~vev~~ 157 (297)
||+||+|+|++..++..++ .++.+.++++++++..++..+ . ..+.+.+. +..+++....+.+|... +.+.++.
T Consensus 58 advvi~~v~~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~~ 137 (287)
T 3pdu_A 58 CDITIAMLADPAAAREVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRFLEAPVSGTKKPAEDGTLIILA 137 (287)
T ss_dssp CSEEEECCSSHHHHHHHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCEEEEE
T ss_pred CCEEEEEcCCHHHHHHHHcCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEECCccCCHHHHhcCCEEEEE
Confidence 9999999998766665544 556677777777664333222 2 34444332 22334333222211100 1123333
Q ss_pred CCCChHHHHHHHHHHHHHhCCeEEEecc-chhh---hHHHHH----HHHHHHHHHHHHcCCCCHHHHHHHHhhccCC
Q 022407 158 GADTSDETFRATKALAERFGKTVVCSQD-YAGF---IVNRIL----MPMINEAFFTLYTGVATKEDIDAGMKLGTNQ 226 (297)
Q Consensus 158 ~~~~~~~~~~~~~~l~~~lG~~~v~~~d-~~g~---i~nri~----~~~~~Ea~~l~~~g~~~~~~id~a~~~g~g~ 226 (297)
+ ++++.+++++++++.+|++++++++ ..+. ++++.+ ...++|++.++++.+++++++..++..+.+.
T Consensus 138 g--g~~~~~~~~~~ll~~~g~~~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~ 212 (287)
T 3pdu_A 138 A--GDQSLFTDAGPAFAALGKKCLHLGEVGQGARMKLVVNMIMGQMMTALGEGMALGRNCGLDGGQLLEVLDAGAMA 212 (287)
T ss_dssp E--ECHHHHHHTHHHHHHHEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHSTTC
T ss_pred e--CCHHHHHHHHHHHHHhCCCEEEcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcccc
Confidence 3 5789999999999999999999876 2232 444443 3467999999999889999999998876543
No 29
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.82 E-value=2.5e-19 Score=157.84 Aligned_cols=190 Identities=16% Similarity=0.234 Sum_probs=132.8
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-cc
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LH 83 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~ 83 (297)
.+||+|||+|.||.+||..|+++|++|++||+++++++.+ .+.| +..++++++ ++
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l-----------~~~g-------------~~~~~~~~e~~~ 86 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASL-----------AALG-------------ATIHEQARAAAR 86 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHH-----------HTTT-------------CEEESSHHHHHT
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHH-----------HHCC-------------CEeeCCHHHHHh
Confidence 4699999999999999999999999999999999987765 3333 356677776 78
Q ss_pred CCcEEEEecccCHHHHHHHHH-HHHhhccCCeEEeecC-CCccH-HHHhhhcCCCCeEEEeecCCCCCCCc-------ce
Q 022407 84 SADIIVEAIVESEDVKKKLFS-ELDKITKASAILASNT-SSISI-TRLASATSRPCQVIGMHFMNPPPLMK-------LV 153 (297)
Q Consensus 84 ~aD~Vi~~v~e~~~~k~~~~~-~l~~~~~~~~ii~s~t-s~~~~-~~l~~~~~~~~~~~g~h~~~p~~~~~-------~v 153 (297)
+||+||+|+|++..++..+.. .+.+.++++++|+..+ +.+.. ..+.+.+... +.+|+++|-..+ .+
T Consensus 87 ~aDvVi~~vp~~~~~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~----g~~~~~~pv~g~~~~a~~g~l 162 (320)
T 4dll_A 87 DADIVVSMLENGAVVQDVLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGAL----GIAHLDTPVSGGTVGAEQGTL 162 (320)
T ss_dssp TCSEEEECCSSHHHHHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHT----TCEEEECCEECHHHHHHHTCE
T ss_pred cCCEEEEECCCHHHHHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHc----CCEEEeCCCcCCHhHHhcCCe
Confidence 999999999987766554432 5556666666665333 33332 3444443211 233443331111 12
Q ss_pred eEecCCCChHHHHHHHHHHHHHhCCeEEEecc-chhh---hHHHHHH----HHHHHHHHHHHcCCCCHHHHHHHHhhccC
Q 022407 154 EVIRGADTSDETFRATKALAERFGKTVVCSQD-YAGF---IVNRILM----PMINEAFFTLYTGVATKEDIDAGMKLGTN 225 (297)
Q Consensus 154 ev~~~~~~~~~~~~~~~~l~~~lG~~~v~~~d-~~g~---i~nri~~----~~~~Ea~~l~~~g~~~~~~id~a~~~g~g 225 (297)
.++.+ ++++++++++++++.+ ++++++++ ..+. ++++++. .+++|++.++++.+++++++..++..+.+
T Consensus 163 ~i~~g--g~~~~~~~~~~ll~~~-~~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~~ 239 (320)
T 4dll_A 163 VIMAG--GKPADFERSLPLLKVF-GRATHVGPHGSGQLTKLANQMIVGITIGAVAEALLFATKGGADMAKVKEAITGGFA 239 (320)
T ss_dssp EEEEE--SCHHHHHHHHHHHHHH-EEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHTTSTT
T ss_pred eEEeC--CCHHHHHHHHHHHHhc-CCEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcccc
Confidence 33333 5789999999999999 88888876 2332 4455443 46899999999988999999999876654
No 30
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=99.81 E-value=1.1e-19 Score=156.84 Aligned_cols=213 Identities=11% Similarity=0.090 Sum_probs=141.5
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcE-EEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-cc
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDV-WLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LH 83 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~ 83 (297)
+||+|||+|.||..|+..|+++ ++| .+||+++++++.+.+ ..| . ..+++++ ++
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~----------~~g-------------~-~~~~~~~~~~ 57 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKDR-YEIGYILSRSIDRARNLAE----------VYG-------------G-KAATLEKHPE 57 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHH----------HTC-------------C-CCCSSCCCCC
T ss_pred ceEEEEeCCHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHH----------HcC-------------C-ccCCHHHHHh
Confidence 5799999999999999999988 999 599999987766521 111 1 2345555 78
Q ss_pred CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHHHHhhhcCCCCeEEEeec----CCCCCCCc-ceeEecC
Q 022407 84 SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHF----MNPPPLMK-LVEVIRG 158 (297)
Q Consensus 84 ~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~~l~~~~~~~~~~~g~h~----~~p~~~~~-~vev~~~ 158 (297)
+||+||+|+|++. ...++.++. +++++|++.+++++.+.+... ...+.|+ .++|.... ..++...
T Consensus 58 ~~DvVilav~~~~--~~~v~~~l~---~~~~ivi~~s~~~~~~~l~~~-----~~~~~~p~~~~~g~~~~~~~~~~~~~~ 127 (276)
T 2i76_A 58 LNGVVFVIVPDRY--IKTVANHLN---LGDAVLVHCSGFLSSEIFKKS-----GRASIHPNFSFSSLEKALEMKDQIVFG 127 (276)
T ss_dssp ---CEEECSCTTT--HHHHHTTTC---CSSCCEEECCSSSCGGGGCSS-----SEEEEEECSCC--CTTGGGCGGGCCEE
T ss_pred cCCEEEEeCChHH--HHHHHHHhc---cCCCEEEECCCCCcHHHHHHh-----hccccchhhhcCCCchhHHHhCCCeEE
Confidence 8999999999876 456666554 567777766656666655443 3445664 33332111 2222222
Q ss_pred CCChHHHHHHHHHHHHHhCCeEEEeccc--hh-----hhHHHHHHHHHHHHHHHHHcCCCC-H---------HHHHHHHh
Q 022407 159 ADTSDETFRATKALAERFGKTVVCSQDY--AG-----FIVNRILMPMINEAFFTLYTGVAT-K---------EDIDAGMK 221 (297)
Q Consensus 159 ~~~~~~~~~~~~~l~~~lG~~~v~~~d~--~g-----~i~nri~~~~~~Ea~~l~~~g~~~-~---------~~id~a~~ 221 (297)
..++++.++.++++++.+|++++++++. +. .+.++++..+++|+..+++..+.+ . ..++.+++
T Consensus 128 ~~~~~~~~~~~~~l~~~lG~~~~~v~~~~~~~~~~~~~l~~n~~~~~~~~a~~~~~~~Gl~~~~a~~~~l~~~~~~~~~~ 207 (276)
T 2i76_A 128 LEGDERGLPIVKKIAEEISGKYFVIPSEKKKAYHLAAVIASNFPVALAYLSKRIYTLLGLDEPELLIHTLMKGVADNIKK 207 (276)
T ss_dssp ECCCTTTHHHHHHHHHHHCSCEEECCGGGHHHHHHHHHHHHTTHHHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHH
T ss_pred EEeChHHHHHHHHHHHHhCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHh
Confidence 2345667999999999999988888642 11 244556677889998888854444 4 46777777
Q ss_pred hc-cCCCccHHHHHHhhchHHHHHHHHHHHhhc
Q 022407 222 LG-TNQPMGPLQLADFIGLDVCLSIMKVLHTGL 253 (297)
Q Consensus 222 ~g-~g~~~Gp~~~~D~~Gl~~~~~~~~~~~~~~ 253 (297)
.| .+.++||++..|..+++..+..++.+++.+
T Consensus 208 ~gp~~~~tgP~~r~D~~t~~~~l~~l~~~~~~~ 240 (276)
T 2i76_A 208 MRVECSLTGPVKRGDWQVVEEERREYEKIFGNT 240 (276)
T ss_dssp SCGGGGCCSHHHHTCHHHHHHHHHHHHHHHSCC
T ss_pred cChHhhCCCCcccCCHHHHHHHHHHHhccCccH
Confidence 77 666789999999999999999999875554
No 31
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.79 E-value=6.1e-17 Score=142.32 Aligned_cols=193 Identities=12% Similarity=0.087 Sum_probs=126.5
Q ss_pred CCcEEEEECCChhHHHHHHHHHHCC-CcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-
Q 022407 4 KMKVMGVVGSGQMGSGIAQLGVMDG-LDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD- 81 (297)
Q Consensus 4 ~~~~V~iiG~G~mG~~iA~~l~~~G-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~- 81 (297)
++++|+|||+|.||.+||..|+++| ++|++||++++..++..+.. +.+.+.| + ..+++++
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~----~~~~~~g-------------~-~~~s~~e~ 84 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALR----ARAAELG-------------V-EPLDDVAG 84 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHH----HHHHHTT-------------C-EEESSGGG
T ss_pred cCCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHH----HHHHHCC-------------C-CCCCHHHH
Confidence 3478999999999999999999999 99999999973211111111 1112223 1 2314444
Q ss_pred ccCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccH--HHHhhhcC-CCCeEEEeecCCCCC--CCcceeEe
Q 022407 82 LHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISI--TRLASATS-RPCQVIGMHFMNPPP--LMKLVEVI 156 (297)
Q Consensus 82 ~~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~--~~l~~~~~-~~~~~~g~h~~~p~~--~~~~vev~ 156 (297)
+++||+||.|+|++...+ .+.++.+.++++++|++.++..+. ..+.+.+. ...+++....+.|+. ...+..++
T Consensus 85 ~~~aDvVi~avp~~~~~~--~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d~pv~g~~~a~~g~l~i~v 162 (317)
T 4ezb_A 85 IACADVVLSLVVGAATKA--VAASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVEGAVMARVPPYAEKVPILV 162 (317)
T ss_dssp GGGCSEEEECCCGGGHHH--HHHHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEEEEECSCSTTTGGGSEEEE
T ss_pred HhcCCEEEEecCCHHHHH--HHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeccCCCCchhhcCCEEEEE
Confidence 889999999999887643 447788888888877754432222 34544442 234555543344332 12344445
Q ss_pred cCCCChHHHHHHHHHHHHHhCCeEEEeccchh-----hhHHHHH----HHHHHHHHHHHHcCCCCHHHHHHHHh
Q 022407 157 RGADTSDETFRATKALAERFGKTVVCSQDYAG-----FIVNRIL----MPMINEAFFTLYTGVATKEDIDAGMK 221 (297)
Q Consensus 157 ~~~~~~~~~~~~~~~l~~~lG~~~v~~~d~~g-----~i~nri~----~~~~~Ea~~l~~~g~~~~~~id~a~~ 221 (297)
.+. ++ ++++++|+.+|++++++++.+| .++++++ ..+++|++.++++.+++++.++.+..
T Consensus 163 gg~---~~--~~~~~ll~~~g~~v~~~g~~~g~a~~~Kl~~N~~~~~~~~~~~E~~~la~~~Gid~~~~~~l~~ 231 (317)
T 4ezb_A 163 AGR---RA--VEVAERLNALGMNLEAVGETPGQASSLKMIRSVMIKGVEALLIEALSSAERAGVTERILDSVQE 231 (317)
T ss_dssp EST---TH--HHHHHHHHTTTCEEEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred eCC---hH--HHHHHHHHHhCCCeEEeCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHh
Confidence 442 23 8899999999999999987444 2555544 46789999999998888866665544
No 32
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.79 E-value=2.4e-18 Score=153.19 Aligned_cols=192 Identities=13% Similarity=0.136 Sum_probs=136.1
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-cc
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LH 83 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~ 83 (297)
.++|+|||+|.||..||..|+++|++|++||+++++++.+ .+.|. ...+++++ ++
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l-----------~~~g~-------------~~~~s~~e~~~ 77 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQAL-----------EREGI-------------AGARSIEEFCA 77 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-----------HTTTC-------------BCCSSHHHHHH
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHH-----------HHCCC-------------EEeCCHHHHHh
Confidence 3699999999999999999999999999999999987765 33332 34566665 66
Q ss_pred CC---cEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccH--HHHhhhc-CCCCeEEEeecCCCCCCC-cceeEe
Q 022407 84 SA---DIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISI--TRLASAT-SRPCQVIGMHFMNPPPLM-KLVEVI 156 (297)
Q Consensus 84 ~a---D~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~--~~l~~~~-~~~~~~~g~h~~~p~~~~-~~vev~ 156 (297)
++ |+||.|+|.+ . ...++.++.+.++++++|++.+++.+. ..+++.+ .+..+++....+.++... ....++
T Consensus 78 ~a~~~DvVi~~vp~~-~-v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsGg~~~a~~G~~im 155 (358)
T 4e21_A 78 KLVKPRVVWLMVPAA-V-VDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSGGIFGLERGYCLM 155 (358)
T ss_dssp HSCSSCEEEECSCGG-G-HHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEECGGGHHHHCCEEE
T ss_pred cCCCCCEEEEeCCHH-H-HHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCCCHHHHhcCCeee
Confidence 77 9999999988 4 456778888888888888766555443 3444444 233445554332222100 011455
Q ss_pred cCCCChHHHHHHHHHHHHHhC--------------------CeEEEecc-chhh---hHHHHH----HHHHHHHHHHHHc
Q 022407 157 RGADTSDETFRATKALAERFG--------------------KTVVCSQD-YAGF---IVNRIL----MPMINEAFFTLYT 208 (297)
Q Consensus 157 ~~~~~~~~~~~~~~~l~~~lG--------------------~~~v~~~d-~~g~---i~nri~----~~~~~Ea~~l~~~ 208 (297)
.+ ++++++++++++|+.+| +.++++++ ..|. ++++.+ ...++|++.++++
T Consensus 156 ~G--G~~~a~~~~~~ll~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~G~~G~g~~~Kl~~n~l~~~~i~~~aE~~~la~~ 233 (358)
T 4e21_A 156 IG--GEKQAVERLDPVFRTLAPGIGAAPRTPGREKREGTAELGYLHCGPSGAGHFVKMVHNGIEYGLMAAYAEGLNILHH 233 (358)
T ss_dssp EE--SCHHHHHHTHHHHHHHSCCGGGSCCCTTGGGCCSSGGGTEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ec--CCHHHHHHHHHHHHHhccccccCcccccccccccccccceEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 54 68999999999999999 56778875 3443 444433 3567999999998
Q ss_pred C------------------------CCCHHHHHHHHhhcc
Q 022407 209 G------------------------VATKEDIDAGMKLGT 224 (297)
Q Consensus 209 g------------------------~~~~~~id~a~~~g~ 224 (297)
. ..+.++|-.+++.|.
T Consensus 234 a~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~~~~~~g~ 273 (358)
T 4e21_A 234 ANAGKEGQGADAETAPLRNPDFYRYDLDLADITEVWRRGS 273 (358)
T ss_dssp TTCC--------------CGGGCCCCCCHHHHHHHHTTTS
T ss_pred cccccccccccccccccccchhcccCCCHHHHHHHHhCcc
Confidence 6 578888888887654
No 33
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=99.78 E-value=1.2e-18 Score=144.73 Aligned_cols=162 Identities=14% Similarity=0.141 Sum_probs=127.1
Q ss_pred CCCCCcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcc
Q 022407 1 MEEKMKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLK 80 (297)
Q Consensus 1 M~~~~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 80 (297)
|....+||+|||+|.||.+||..|.++|++|++||+. +
T Consensus 2 ~~~~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~------------------------------------------~ 39 (232)
T 3dfu_A 2 MQAPRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP------------------------------------------E 39 (232)
T ss_dssp -CCCCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG------------------------------------------G
T ss_pred CCCCCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH------------------------------------------H
Confidence 5556689999999999999999999999999999972 1
Q ss_pred cccCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHHHHhhhcCCCCeEEEeecCCCCCCCcceeEecCCC
Q 022407 81 DLHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPPPLMKLVEVIRGAD 160 (297)
Q Consensus 81 ~~~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~~l~~~~~~~~~~~g~h~~~p~~~~~~vev~~~~~ 160 (297)
++++|| |.|+|.+. ...++.++.+.+++++++++.+++.+.+.+......+.++++.||+... ..++..
T Consensus 40 ~~~~aD--ilavP~~a--i~~vl~~l~~~l~~g~ivvd~sgs~~~~vl~~~~~~g~~fvg~HPm~g~-----~~~i~a-- 108 (232)
T 3dfu_A 40 DIRDFE--LVVIDAHG--VEGYVEKLSAFARRGQMFLHTSLTHGITVMDPLETSGGIVMSAHPIGQD-----RWVASA-- 108 (232)
T ss_dssp GGGGCS--EEEECSSC--HHHHHHHHHTTCCTTCEEEECCSSCCGGGGHHHHHTTCEEEEEEEEETT-----EEEEEE--
T ss_pred HhccCC--EEEEcHHH--HHHHHHHHHHhcCCCCEEEEECCcCHHHHHHHHHhCCCcEEEeeeCCCC-----ceeeeC--
Confidence 245688 88999873 4677788888888999988766666555444444456789999987432 223322
Q ss_pred ChHHHHHHHHHHHHHhCCeEEEecc--chhh----hHHHHHHHHHHHHHHHH---HcCCCCHHH
Q 022407 161 TSDETFRATKALAERFGKTVVCSQD--YAGF----IVNRILMPMINEAFFTL---YTGVATKED 215 (297)
Q Consensus 161 ~~~~~~~~~~~l~~~lG~~~v~~~d--~~g~----i~nri~~~~~~Ea~~l~---~~g~~~~~~ 215 (297)
.+++.++.++++++.+|.+++++.+ .+.+ ...+.+.+++++|.+++ ++|+++++|
T Consensus 109 ~d~~a~~~l~~L~~~lG~~vv~~~~~~hd~~~AAvsh~nhLv~L~~~A~~ll~~~~~g~a~~~d 172 (232)
T 3dfu_A 109 LDELGETIVGLLVGELGGSIVEIADDKRAQLAAALTYAGFLSTLQRDASYFLDEFLGDPDVTSD 172 (232)
T ss_dssp SSHHHHHHHHHHHHHTTCEECCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCEEEEeCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhh
Confidence 3788999999999999999998854 4555 66888899999999999 889989998
No 34
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=99.78 E-value=2.6e-17 Score=151.19 Aligned_cols=207 Identities=14% Similarity=0.159 Sum_probs=138.7
Q ss_pred CCcEEEEECCChhHHHHHHHHHHC-CC-cEEEEeCCHH----HHHHHHHHH------HHHHHHHHHcCCCChhhhcccCC
Q 022407 4 KMKVMGVVGSGQMGSGIAQLGVMD-GL-DVWLVDTDPD----ALVRATKSI------SSSIQKFVSKGQLSQAMGTDAPR 71 (297)
Q Consensus 4 ~~~~V~iiG~G~mG~~iA~~l~~~-G~-~V~~~d~~~~----~~~~~~~~~------~~~~~~~~~~g~~~~~~~~~~~~ 71 (297)
.++||+|||+|.||.++|..|+++ || +|++||++++ +++.+.+.. +..++.++++ .....
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~--------~~~~g 88 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGK--------VVKAG 88 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHH--------HHHTT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHh--------hcccC
Confidence 468999999999999999999999 99 9999999999 887763210 0011111110 00135
Q ss_pred ceEEecCcccccCCcEEEEecccCH----------HHHHHHHHHHHhhccCCeEEeecCCCccH---HHHhh-----hcC
Q 022407 72 RLRCTSNLKDLHSADIIVEAIVESE----------DVKKKLFSELDKITKASAILASNTSSISI---TRLAS-----ATS 133 (297)
Q Consensus 72 ~i~~~~~~~~~~~aD~Vi~~v~e~~----------~~k~~~~~~l~~~~~~~~ii~s~ts~~~~---~~l~~-----~~~ 133 (297)
+++++++.+.+++||+||+|||++. .......+.+.+.++++++++ +.||+++ ++++. ..+
T Consensus 89 ~l~~ttd~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV-~~STv~pgtt~~v~~~ile~~~g 167 (478)
T 3g79_A 89 KFECTPDFSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVV-LESTITPGTTEGMAKQILEEESG 167 (478)
T ss_dssp CEEEESCGGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEE-ECSCCCTTTTTTHHHHHHHHHHC
T ss_pred CeEEeCcHHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEE-EeCCCChHHHHHHHHHHHHHhcC
Confidence 6788888666999999999999863 223455667888888888766 3445554 23332 122
Q ss_pred C--CCeEEEeec-CCCCCCCcc---------eeEecCCCChHHHHHHHHHHHHHh-CCeEEEeccch-h---hhHHHHH-
Q 022407 134 R--PCQVIGMHF-MNPPPLMKL---------VEVIRGADTSDETFRATKALAERF-GKTVVCSQDYA-G---FIVNRIL- 195 (297)
Q Consensus 134 ~--~~~~~g~h~-~~p~~~~~~---------vev~~~~~~~~~~~~~~~~l~~~l-G~~~v~~~d~~-g---~i~nri~- 195 (297)
. ...+ ++ ++|....+. ..|+.| .+++.+++++++++.+ ++.++++++.. + .++|+++
T Consensus 168 ~~~~~d~---~v~~~Pe~~~~G~a~~~~~~~~~Iv~G--~~~~~~~~~~~ly~~~~~~~~~~~~~~~~aE~~Kl~~N~~~ 242 (478)
T 3g79_A 168 LKAGEDF---ALAHAPERVMVGRLLKNIREHDRIVGG--IDEASTKRAVELYSPVLTVGQVIPMSATAAEVTKTAENTFR 242 (478)
T ss_dssp CCBTTTB---EEEECCCCCCTTSHHHHHHHSCEEEEE--SSHHHHHHHHHHHGGGCSSCCEEEEEHHHHHHHHHHHHHHH
T ss_pred CCcCCce---eEEeCCccCCccchhhhhcCCcEEEEe--CCHHHHHHHHHHHhhhccCCeEEeCCHHHHHHHHHHHHHHH
Confidence 1 1111 11 234332221 146655 6788889999999999 88888876642 2 3566655
Q ss_pred ---HHHHHHHHHHHHcCCCCHHHHHHHHhhcc
Q 022407 196 ---MPMINEAFFTLYTGVATKEDIDAGMKLGT 224 (297)
Q Consensus 196 ---~~~~~Ea~~l~~~g~~~~~~id~a~~~g~ 224 (297)
.+++||++.++++-+++++++-.++....
T Consensus 243 a~~Ia~~nE~~~l~e~~GiD~~~v~~~~~~~~ 274 (478)
T 3g79_A 243 DLQIAAINQLALYCEAMGINVYDVRTGVDSLK 274 (478)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHCCCc
Confidence 36789999999998899999877776443
No 35
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.78 E-value=7.1e-18 Score=146.28 Aligned_cols=155 Identities=14% Similarity=0.130 Sum_probs=117.1
Q ss_pred CCcEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcccc
Q 022407 4 KMKVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDL 82 (297)
Q Consensus 4 ~~~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 82 (297)
.+++|+|||+ |.||..+|..|+++|++|++||+++++++.+ .+.|. ...+..+.+
T Consensus 10 mmm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~-----------~~~g~-------------~~~~~~~~~ 65 (286)
T 3c24_A 10 GPKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRL-----------QGMGI-------------PLTDGDGWI 65 (286)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHH-----------HHTTC-------------CCCCSSGGG
T ss_pred cCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHH-----------HhcCC-------------CcCCHHHHh
Confidence 3479999999 9999999999999999999999999877665 22231 122223347
Q ss_pred cCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHHHHhhhcCCCCeEEEeecCCCCC--------CCcc--
Q 022407 83 HSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPPP--------LMKL-- 152 (297)
Q Consensus 83 ~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~~l~~~~~~~~~~~g~h~~~p~~--------~~~~-- 152 (297)
++||+||+|+|.+. ...++.++.+.++++++|++.+++.+.+.+.+ .....++++.||+.|+. ....
T Consensus 66 ~~aDvVi~av~~~~--~~~v~~~l~~~l~~~~ivv~~s~~~~~~~l~~-~~~~~~~v~~~P~~~~~~~~~~~~~~~~g~l 142 (286)
T 3c24_A 66 DEADVVVLALPDNI--IEKVAEDIVPRVRPGTIVLILDAAAPYAGVMP-ERADITYFIGHPCHPPLFNDETDPAARTDYH 142 (286)
T ss_dssp GTCSEEEECSCHHH--HHHHHHHHGGGSCTTCEEEESCSHHHHHTCSC-CCTTSEEEEEEECCSCSSCCCCSHHHHTCSS
T ss_pred cCCCEEEEcCCchH--HHHHHHHHHHhCCCCCEEEECCCCchhHHHHh-hhCCCeEEecCCCCccccccccchhhccCcc
Confidence 89999999998765 56788888888888999988777776666654 33346899999988765 2121
Q ss_pred ------eeEecCCCChHHHHHHHHHHHHHhCC---eEEEecc
Q 022407 153 ------VEVIRGADTSDETFRATKALAERFGK---TVVCSQD 185 (297)
Q Consensus 153 ------vev~~~~~~~~~~~~~~~~l~~~lG~---~~v~~~d 185 (297)
..++.+..++++.++.+.++++.+|. +++++++
T Consensus 143 ~~~~~~~~i~~~~~~~~~~~~~v~~l~~~~G~~~~~~~~v~~ 184 (286)
T 3c24_A 143 GGIAKQAIVCALMQGPEEHYAIGADICETMWSPVTRTHRVTT 184 (286)
T ss_dssp SSSSCEEEEEEEEESCTHHHHHHHHHHHHHTCSEEEEEECCH
T ss_pred cccccceeeeeccCCCHHHHHHHHHHHHHhcCCcceEEEeCh
Confidence 22333344788999999999999999 7888754
No 36
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=99.78 E-value=1e-17 Score=147.69 Aligned_cols=154 Identities=18% Similarity=0.225 Sum_probs=117.5
Q ss_pred CcEEEEECCChhHHHHHHHHHHCC----CcEEEEeCCHH--HHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecC
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDG----LDVWLVDTDPD--ALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSN 78 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G----~~V~~~d~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 78 (297)
++||+|||+|.||.+||..|+++| ++|++||++++ +++.+ .+.| +..+++
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l-----------~~~G-------------~~~~~~ 77 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSAL-----------RKMG-------------VKLTPH 77 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHH-----------HHHT-------------CEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHH-----------HHcC-------------CEEeCC
Confidence 468999999999999999999999 89999999986 55554 1223 245555
Q ss_pred ccc-ccCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHHHHhhhcCC---CCeEEEeecCCCCCCCccee
Q 022407 79 LKD-LHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSR---PCQVIGMHFMNPPPLMKLVE 154 (297)
Q Consensus 79 ~~~-~~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~~l~~~~~~---~~~~~g~h~~~p~~~~~~ve 154 (297)
..+ +++||+||.|+|.. ...+++.++.+.++++++|++.+++++.+.+.+.+.. ..++++.++..|........
T Consensus 78 ~~e~~~~aDvVilav~~~--~~~~vl~~l~~~l~~~~ivvs~s~gi~~~~l~~~l~~~~~~~~vv~~~p~~p~~~~~g~~ 155 (322)
T 2izz_A 78 NKETVQHSDVLFLAVKPH--IIPFILDEIGADIEDRHIVVSCAAGVTISSIEKKLSAFRPAPRVIRCMTNTPVVVREGAT 155 (322)
T ss_dssp HHHHHHHCSEEEECSCGG--GHHHHHHHHGGGCCTTCEEEECCTTCCHHHHHHHHHTTSSCCEEEEEECCGGGGGTCEEE
T ss_pred hHHHhccCCEEEEEeCHH--HHHHHHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHhhcCCCCeEEEEeCCcHHHHcCCeE
Confidence 554 78999999999843 3567788888888888999888888888766655532 35788899887765444334
Q ss_pred E-ecCCCChHHHHHHHHHHHHHhCCeEEEec
Q 022407 155 V-IRGADTSDETFRATKALAERFGKTVVCSQ 184 (297)
Q Consensus 155 v-~~~~~~~~~~~~~~~~l~~~lG~~~v~~~ 184 (297)
+ +.+..++++.++.++++|+.+|..+++..
T Consensus 156 v~~~g~~~~~~~~~~v~~ll~~~G~~~~~~e 186 (322)
T 2izz_A 156 VYATGTHAQVEDGRLMEQLLSSVGFCTEVEE 186 (322)
T ss_dssp EEEECTTCCHHHHHHHHHHHHTTEEEEECCG
T ss_pred EEEeCCCCCHHHHHHHHHHHHhCCCEEEeCH
Confidence 4 45666678999999999999998766543
No 37
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=99.77 E-value=1.6e-17 Score=153.43 Aligned_cols=205 Identities=16% Similarity=0.212 Sum_probs=140.8
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHH----HHHHHHHHcCCCChhhhcccCCceEEecCcc
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSIS----SSIQKFVSKGQLSQAMGTDAPRRLRCTSNLK 80 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 80 (297)
.+||+|||+|.||.++|..|+++||+|++||+++++++.+.+... ..++.++. ......+++++++++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~--------~~~~~~~l~~ttd~~ 79 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIA--------RNRSAGRLRFSTDIE 79 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHH--------HHHHTTCEEEECCHH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHH--------HhcccCCEEEECCHH
Confidence 479999999999999999999999999999999998887633100 00000000 000124578888886
Q ss_pred c-ccCCcEEEEecccC--------HHHHHHHHHHHHhhccCCeEEeecCCCccH---HHHhhhcC----CC---CeEEEe
Q 022407 81 D-LHSADIIVEAIVES--------EDVKKKLFSELDKITKASAILASNTSSISI---TRLASATS----RP---CQVIGM 141 (297)
Q Consensus 81 ~-~~~aD~Vi~~v~e~--------~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~---~~l~~~~~----~~---~~~~g~ 141 (297)
+ +++||+||+|||++ ....+.+++.+.++++++++|+. .|++++ +.+.+.+. .+ ..+ .
T Consensus 80 ~a~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~-~STv~~gt~~~l~~~l~~~~~~g~~~~~~--~ 156 (478)
T 2y0c_A 80 AAVAHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVD-KSTVPVGTAERVRAAVAEELAKRGGDQMF--S 156 (478)
T ss_dssp HHHHHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEE-CSCCCTTHHHHHHHHHHHHHHHTTCCCCE--E
T ss_pred HHhhcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEE-eCCcCCCchHHHHHHHHHHhcCCCCCccE--E
Confidence 5 88999999999984 36678888999999998888763 446544 22322221 11 222 2
Q ss_pred ecCCCCCCCcce---------eEecCCCChH----HHHHHHHHHHHHhCC--eEEEeccc-----hhhhHHHHH---HHH
Q 022407 142 HFMNPPPLMKLV---------EVIRGADTSD----ETFRATKALAERFGK--TVVCSQDY-----AGFIVNRIL---MPM 198 (297)
Q Consensus 142 h~~~p~~~~~~v---------ev~~~~~~~~----~~~~~~~~l~~~lG~--~~v~~~d~-----~g~i~nri~---~~~ 198 (297)
..++|....+.. .++.|. .++ +..+.+.++++.+++ .++++.+. ..++.|.++ .++
T Consensus 157 v~~~Pe~~~eG~~~~~~~~p~~iviG~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~a~~ia~ 235 (478)
T 2y0c_A 157 VVSNPEFLKEGAAVDDFTRPDRIVIGC-DDDVPGERARELMKKLYAPFNRNHERTLYMDVRSAEFTKYAANAMLATRISF 235 (478)
T ss_dssp EEECCCCCCTTCHHHHHHSCSCEEEEC-CSSHHHHHHHHHHHHHTGGGGSSSCCEEEECHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEChhhhcccceeeccCCCCEEEEEE-CCCcccHHHHHHHHHHHHHHhccCCeEEcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 344565444332 455553 234 788999999998775 56777653 235666665 568
Q ss_pred HHHHHHHHHcCCCCHHHHHHHHh
Q 022407 199 INEAFFTLYTGVATKEDIDAGMK 221 (297)
Q Consensus 199 ~~Ea~~l~~~g~~~~~~id~a~~ 221 (297)
+||+..+++..+++++++..++.
T Consensus 236 ~nE~~~la~~~Gid~~~v~~~i~ 258 (478)
T 2y0c_A 236 MNELANLADRFGADIEAVRRGIG 258 (478)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHh
Confidence 99999999999899999887764
No 38
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.77 E-value=3e-18 Score=150.72 Aligned_cols=193 Identities=17% Similarity=0.204 Sum_probs=135.1
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-cc
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LH 83 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~ 83 (297)
+++|+|||+|.||..+|..|+++|++|++||+++++++.+ .+.|. ...++.++ ++
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~-----------~~~g~-------------~~~~~~~~~~~ 85 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLF-----------IQEGA-------------RLGRTPAEVVS 85 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHH-----------HHTTC-------------EECSCHHHHHH
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHH-----------HHcCC-------------EEcCCHHHHHh
Confidence 4789999999999999999999999999999999877654 22232 34555555 78
Q ss_pred CCcEEEEecccCHHHHHHHHHH--HHhhccCCeEEeecCCCcc--HHHHhhhcC-CCCeEEEeecCCCCC---CCcceeE
Q 022407 84 SADIIVEAIVESEDVKKKLFSE--LDKITKASAILASNTSSIS--ITRLASATS-RPCQVIGMHFMNPPP---LMKLVEV 155 (297)
Q Consensus 84 ~aD~Vi~~v~e~~~~k~~~~~~--l~~~~~~~~ii~s~ts~~~--~~~l~~~~~-~~~~~~g~h~~~p~~---~~~~vev 155 (297)
++|+||+|+|++..++..+... +.+.++++++|++.++..+ ..++.+.+. .+.++++.++++.+. ...+..+
T Consensus 86 ~~DvVi~av~~~~~~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~~~v~~p~~g~~~~~~~g~~~~~ 165 (316)
T 2uyy_A 86 TCDITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVIL 165 (316)
T ss_dssp HCSEEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEESCHHHHHHTCEEEE
T ss_pred cCCEEEEeCCCHHHHHHHHcCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEcCccCChhHHhhCCEEEE
Confidence 8999999999776655433321 2355666776664433322 345665552 356788776554331 1223444
Q ss_pred ecCCCChHHHHHHHHHHHHHhCCeEEEeccc-hh----hhHHHH---HHHHHHHHHHHHHcCCCCHHHHHHHHhhcc
Q 022407 156 IRGADTSDETFRATKALAERFGKTVVCSQDY-AG----FIVNRI---LMPMINEAFFTLYTGVATKEDIDAGMKLGT 224 (297)
Q Consensus 156 ~~~~~~~~~~~~~~~~l~~~lG~~~v~~~d~-~g----~i~nri---~~~~~~Ea~~l~~~g~~~~~~id~a~~~g~ 224 (297)
+.+ +++.++.+.++|+.+|..++++++. .+ ++.|.+ +..+++|++.++++.++++++++.++..+.
T Consensus 166 ~~g---~~~~~~~v~~ll~~~g~~~~~~~~~~~~~~~K~~~n~~~~~~~~~~~Ea~~la~~~G~~~~~~~~~~~~~~ 239 (316)
T 2uyy_A 166 AAG---DRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDILNQGQ 239 (316)
T ss_dssp EEE---CHHHHHHTHHHHHHHEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHST
T ss_pred eCC---CHHHHHHHHHHHHHhcCCEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCC
Confidence 444 5789999999999999999888662 22 345554 356789999999888889999988877653
No 39
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.77 E-value=7.2e-18 Score=147.23 Aligned_cols=195 Identities=18% Similarity=0.228 Sum_probs=134.7
Q ss_pred CCCCCcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcc
Q 022407 1 MEEKMKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLK 80 (297)
Q Consensus 1 M~~~~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 80 (297)
|.+ .+||+|||+|.||..+|..|+++|++|++||+++++.+.+ .+.| +...++++
T Consensus 1 M~~-~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~-----------~~~g-------------~~~~~~~~ 55 (301)
T 3cky_A 1 MEK-SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAV-----------VAQG-------------AQACENNQ 55 (301)
T ss_dssp ----CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHH-----------HTTT-------------CEECSSHH
T ss_pred CCC-CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-----------HHCC-------------CeecCCHH
Confidence 543 4699999999999999999999999999999999877665 2222 24555665
Q ss_pred c-ccCCcEEEEecccCHHHHHHHH--HHHHhhccCCeEEeecCCCcc--HHHHhhhcCC-CCeEEEeecCCCCCC---Cc
Q 022407 81 D-LHSADIIVEAIVESEDVKKKLF--SELDKITKASAILASNTSSIS--ITRLASATSR-PCQVIGMHFMNPPPL---MK 151 (297)
Q Consensus 81 ~-~~~aD~Vi~~v~e~~~~k~~~~--~~l~~~~~~~~ii~s~ts~~~--~~~l~~~~~~-~~~~~g~h~~~p~~~---~~ 151 (297)
+ ++++|+||.|+|.+.+++..+. .++.+.++++++|++.+++.+ .+.+.+.+.. ..+++.. +..+... .+
T Consensus 56 ~~~~~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~~~~~~-p~~~~~~~a~~g 134 (301)
T 3cky_A 56 KVAAASDIIFTSLPNAGIVETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYVDA-PVSGGTKGAEAG 134 (301)
T ss_dssp HHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTCEEEEC-CEESHHHHHHHT
T ss_pred HHHhCCCEEEEECCCHHHHHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEc-cCCCCHHHHHcC
Confidence 5 7889999999998776655444 267777888888887777663 3556655432 2344432 1111100 01
Q ss_pred ceeEecCCCChHHHHHHHHHHHHHhCCeEEEecc-chhh----hHHHH---HHHHHHHHHHHHHcCCCCHHHHHHHHhhc
Q 022407 152 LVEVIRGADTSDETFRATKALAERFGKTVVCSQD-YAGF----IVNRI---LMPMINEAFFTLYTGVATKEDIDAGMKLG 223 (297)
Q Consensus 152 ~vev~~~~~~~~~~~~~~~~l~~~lG~~~v~~~d-~~g~----i~nri---~~~~~~Ea~~l~~~g~~~~~~id~a~~~g 223 (297)
.+.++.+ ++++.++.+.++|+.+|..++++++ ..+. +.|.+ +...++|++.++++.+++++++...+..+
T Consensus 135 ~~~~~~~--g~~~~~~~v~~ll~~~g~~~~~~~~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~ 212 (301)
T 3cky_A 135 TLTIMVG--ASEAVFEKIQPVLSVIGKDIYHVGDTGAGDAVKIVNNLLLGCNMASLAEALVLGVKCGLKPETMQEIIGKS 212 (301)
T ss_dssp CEEEEEE--SCHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTS
T ss_pred CeEEEEC--CCHHHHHHHHHHHHHhcCCEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcC
Confidence 1233333 3788999999999999999887765 3343 34444 34578999999988788998888877644
No 40
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.76 E-value=1.3e-17 Score=145.57 Aligned_cols=193 Identities=18% Similarity=0.294 Sum_probs=134.9
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|+|||+|.||..+|..|+++|++|++||+++++.+.+ .+.| +...+++++ +++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~-----------~~~g-------------~~~~~~~~~~~~~ 61 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADV-----------IAAG-------------AETASTAKAIAEQ 61 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH-----------HHTT-------------CEECSSHHHHHHH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHH-----------HHCC-------------CeecCCHHHHHhC
Confidence 589999999999999999999999999999999887665 2223 245566655 788
Q ss_pred CcEEEEecccCHHHHHHHH--HHHHhhccCCeEEeecCCCccH--HHHhhhcCC-CCeEEEeecCC-CCC-CCcceeEec
Q 022407 85 ADIIVEAIVESEDVKKKLF--SELDKITKASAILASNTSSISI--TRLASATSR-PCQVIGMHFMN-PPP-LMKLVEVIR 157 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~--~~l~~~~~~~~ii~s~ts~~~~--~~l~~~~~~-~~~~~g~h~~~-p~~-~~~~vev~~ 157 (297)
+|+||+|+|++.+++..++ .++.+.++++++|++.+++.+. +.+.+.+.. ...++....+. ++. ..+.+.++.
T Consensus 62 ~D~vi~~v~~~~~~~~~~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~pv~~~~~~~~~~~~~~~~ 141 (299)
T 1vpd_A 62 CDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLDAPVSGGEPKAIDGTLSVMV 141 (299)
T ss_dssp CSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESHHHHHHHTCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHhCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEecCCCCHhHHhcCCEEEEe
Confidence 9999999997766554443 4677778888888766555442 456655532 23333321111 110 011234444
Q ss_pred CCCChHHHHHHHHHHHHHhCCeEEEecc-chhh---hHHHHHH----HHHHHHHHHHHcCCCCHHHHHHHHhhcc
Q 022407 158 GADTSDETFRATKALAERFGKTVVCSQD-YAGF---IVNRILM----PMINEAFFTLYTGVATKEDIDAGMKLGT 224 (297)
Q Consensus 158 ~~~~~~~~~~~~~~l~~~lG~~~v~~~d-~~g~---i~nri~~----~~~~Ea~~l~~~g~~~~~~id~a~~~g~ 224 (297)
+ ++++.++.+.++|+.+|..++++++ ..+. ++++.+. ..++|++.++++.++++++++.++..+.
T Consensus 142 ~--~~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~ 214 (299)
T 1vpd_A 142 G--GDKAIFDKYYDLMKAMAGSVVHTGDIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRGGL 214 (299)
T ss_dssp E--SCHHHHHHHHHHHHTTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTST
T ss_pred C--CCHHHHHHHHHHHHHHcCCeEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHccC
Confidence 4 4788999999999999999988865 3443 3344443 5789999999888889999888876544
No 41
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=99.75 E-value=5.2e-17 Score=147.11 Aligned_cols=198 Identities=15% Similarity=0.194 Sum_probs=132.5
Q ss_pred CCcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHH----HHHHHHHHHcCCCChhhhcccCCceEEecCc
Q 022407 4 KMKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSI----SSSIQKFVSKGQLSQAMGTDAPRRLRCTSNL 79 (297)
Q Consensus 4 ~~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 79 (297)
.++||+|||+|.||.++|..|++ |++|++||+++++++.+.+.. +..++.+++.+ ..++++++|+
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~----------~~~l~~ttd~ 103 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEK----------PLNFRATTDK 103 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHS----------CCCEEEESCH
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhc----------cCCeEEEcCH
Confidence 35799999999999999999998 999999999999988764321 01122222111 2357888887
Q ss_pred cc-ccCCcEEEEecccCH---------HHHHHHHHHHHhhccCCeEEeecCCCccH---HHHhhhcCCCCeEEEeecCCC
Q 022407 80 KD-LHSADIIVEAIVESE---------DVKKKLFSELDKITKASAILASNTSSISI---TRLASATSRPCQVIGMHFMNP 146 (297)
Q Consensus 80 ~~-~~~aD~Vi~~v~e~~---------~~k~~~~~~l~~~~~~~~ii~s~ts~~~~---~~l~~~~~~~~~~~g~h~~~p 146 (297)
++ +++||+||+|+|++. .....+.+.+.+ ++++++++ ..|++++ +++.+.+.. . ++.| +|
T Consensus 104 ~ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV-~~STv~pgtt~~l~~~l~~--~--~v~~-sP 176 (432)
T 3pid_A 104 HDAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMI-IKSTIPVGFTRDIKERLGI--D--NVIF-SP 176 (432)
T ss_dssp HHHHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEE-ECSCCCTTHHHHHHHHHTC--C--CEEE-CC
T ss_pred HHHHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEE-EeCCCChHHHHHHHHHHhh--c--cEee-cC
Confidence 65 899999999999873 234556677777 67777665 3444443 456665542 1 2222 55
Q ss_pred CCCCcc------e---eEecCCCChHHHHHHHHHHHHH--hCC-eEEEeccc-hh---hhHHHHH----HHHHHHHHHHH
Q 022407 147 PPLMKL------V---EVIRGADTSDETFRATKALAER--FGK-TVVCSQDY-AG---FIVNRIL----MPMINEAFFTL 206 (297)
Q Consensus 147 ~~~~~~------v---ev~~~~~~~~~~~~~~~~l~~~--lG~-~~v~~~d~-~g---~i~nri~----~~~~~Ea~~l~ 206 (297)
....+. . .|+.| ++++..+++.++|.. ++. .++++.+. .+ .++++.+ .+++||++.++
T Consensus 177 e~~~~G~A~~~~l~p~rIvvG--~~~~~~~~~~~ll~~~~~~~~~~v~~~~~~~AE~~Kl~~N~~~a~~Ia~~nEl~~la 254 (432)
T 3pid_A 177 EFLREGRALYDNLHPSRIVIG--ERSARAERFADLLKEGAIKQDIPTLFTDSTEAEAIKLFANTYLALRVAYFNELDSYA 254 (432)
T ss_dssp CCCCTTSHHHHHHSCSCEEES--SCSHHHHHHHHHHHHHCSSSSCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCcchhhhcccCCceEEec--CCHHHHHHHHHHHHhhhccCCCeEEecCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 443321 2 45666 456678888999987 453 34554442 22 2555554 36789999999
Q ss_pred HcCCCCHHHHHHHHh
Q 022407 207 YTGVATKEDIDAGMK 221 (297)
Q Consensus 207 ~~g~~~~~~id~a~~ 221 (297)
+.-+++++++-.++.
T Consensus 255 e~~GiD~~~v~~~~~ 269 (432)
T 3pid_A 255 ESQGLNSKQIIEGVC 269 (432)
T ss_dssp HHTTCCHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHc
Confidence 998899998877774
No 42
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=99.75 E-value=7.9e-17 Score=147.76 Aligned_cols=201 Identities=19% Similarity=0.178 Sum_probs=136.5
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHH--------HHHHHHHHHcCCCChhhhcccCCceEEec
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSI--------SSSIQKFVSKGQLSQAMGTDAPRRLRCTS 77 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~--------~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 77 (297)
+||+|||+|.||.++|..|+++|++|++||+++++++.+.+.. ...+.+.. ...++++++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~------------~~~~l~~t~ 70 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNV------------KAGRLRFGT 70 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHH------------HTTSEEEES
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhc------------ccCcEEEEC
Confidence 6999999999999999999999999999999999888764311 00011001 134578888
Q ss_pred Cccc-ccCCcEEEEecccCHH--------HHHHHHHHHHhhccCCeEEeecCCCccH---HHHhhhcC-----C--CCeE
Q 022407 78 NLKD-LHSADIIVEAIVESED--------VKKKLFSELDKITKASAILASNTSSISI---TRLASATS-----R--PCQV 138 (297)
Q Consensus 78 ~~~~-~~~aD~Vi~~v~e~~~--------~k~~~~~~l~~~~~~~~ii~s~ts~~~~---~~l~~~~~-----~--~~~~ 138 (297)
++++ +++||+||.|+|++.. ....+++.+.+.++++++|+..| ++++ +++.+.+. . ...+
T Consensus 71 d~~ea~~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~S-Tv~pgt~~~l~~~l~~~~~~~~~~~d~ 149 (450)
T 3gg2_A 71 EIEQAVPEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKS-TVPVGSYRLIRKAIQEELDKREVLIDF 149 (450)
T ss_dssp CHHHHGGGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS-CCCTTHHHHHHHHHHHHHHHTTCCCCE
T ss_pred CHHHHHhcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEee-eCCCcchHHHHHHHHHhccccCcCcce
Confidence 8887 8999999999988742 46677888999998888776433 4443 23333221 0 0111
Q ss_pred -EEeecCCCCCCCcce---------eEecCCCChHHHHHHHHHHHHHhCC--eEEEeccchh----hhHHHHH----HHH
Q 022407 139 -IGMHFMNPPPLMKLV---------EVIRGADTSDETFRATKALAERFGK--TVVCSQDYAG----FIVNRIL----MPM 198 (297)
Q Consensus 139 -~g~h~~~p~~~~~~v---------ev~~~~~~~~~~~~~~~~l~~~lG~--~~v~~~d~~g----~i~nri~----~~~ 198 (297)
+. ++|....+.. .++.|. .++++.+.++++++.+++ .++++.+..+ .++++.+ .++
T Consensus 150 ~v~---~~Pe~a~eG~~~~~~~~p~~ivvG~-~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~ 225 (450)
T 3gg2_A 150 DIA---SNPEFLKEGNAIDDFMKPDRVVVGV-DSDRARELITSLYKPMLLNNFRVLFMDIASAEMTKYAANAMLATRISF 225 (450)
T ss_dssp EEE---ECCCCCCTTSHHHHHHSCSCEEEEE-SSHHHHHHHHHHHTTTCCSCCCEEEECHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEE---echhhhcccchhhhccCCCEEEEEc-CCHHHHHHHHHHHHHHhcCCCeEEecCHHHHHHHHHHHHHHHHHHHHH
Confidence 11 2343332211 244441 468999999999999987 3566666432 2444443 467
Q ss_pred HHHHHHHHHcCCCCHHHHHHHHhhc
Q 022407 199 INEAFFTLYTGVATKEDIDAGMKLG 223 (297)
Q Consensus 199 ~~Ea~~l~~~g~~~~~~id~a~~~g 223 (297)
+||+..++++.+++++++-.++..+
T Consensus 226 ~nE~~~l~~~~Gid~~~v~~~~~~~ 250 (450)
T 3gg2_A 226 MNDVANLCERVGADVSMVRLGIGSD 250 (450)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHTS
T ss_pred HHHHHHHHHHhCCCHHHHHHHHcCC
Confidence 8999999999889999988887644
No 43
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=99.75 E-value=4.4e-18 Score=156.86 Aligned_cols=110 Identities=25% Similarity=0.245 Sum_probs=100.1
Q ss_pred ChHHHHHHHHHHHHHhCCeEEEeccchhhhHHHHHHHHHHHHHHHHHcCCCC-HHHHHHHHhhccCCCc---cHHHHHHh
Q 022407 161 TSDETFRATKALAERFGKTVVCSQDYAGFIVNRILMPMINEAFFTLYTGVAT-KEDIDAGMKLGTNQPM---GPLQLADF 236 (297)
Q Consensus 161 ~~~~~~~~~~~l~~~lG~~~v~~~d~~g~i~nri~~~~~~Ea~~l~~~g~~~-~~~id~a~~~g~g~~~---Gp~~~~D~ 236 (297)
+++++.+.+..+...+|+.+..+ .+|+++||++.+++|||++++++|+++ ++|||.+|+.|+|||+ |||+++|.
T Consensus 332 ~~~~~~~~~~~~~~~~g~~~~~~--~~g~i~~Rll~~~~nEa~~~l~eGIa~~~~dID~a~~~G~G~p~~~gGP~~~~D~ 409 (463)
T 1zcj_A 332 PDPWLSTFLSQYREVHHIEQRTI--SKEEILERCLYSLINEAFRILEEGMAARPEHIDVIYLHGYGWPRHKGGPMFYAAS 409 (463)
T ss_dssp ECHHHHHHHHHHHHHTTCCCCCC--CHHHHHHHHHHHHHHHHHHHHHTTSBSCHHHHHHHHHHHSCCCGGGCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCcccC--CHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhCCCCCCCCcChHHHHHH
Confidence 57888888888877788765543 379999999999999999999999994 9999999999999998 99999999
Q ss_pred hchHHHHHHHHHHHhhcCC-CCCCCcHHHHHHHHcCC
Q 022407 237 IGLDVCLSIMKVLHTGLGD-SKYAPCPLLVQYVDAGR 272 (297)
Q Consensus 237 ~Gl~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~g~ 272 (297)
+|++.++.+++.+++.+++ ++|+|+++|++|+++|+
T Consensus 410 ~Gl~~~~~~~~~l~~~~g~~~~~~p~~lL~~~v~~G~ 446 (463)
T 1zcj_A 410 VGLPTVLEKLQKYYRQNPDIPQLEPSDYLRRLVAQGS 446 (463)
T ss_dssp HCHHHHHHHHHHHHHHCTTCGGGSCCHHHHHHHHTTC
T ss_pred hCHHHHHHHHHHHHHHhCCCccCCCCHHHHHHHHcCC
Confidence 9999999999999999998 68999999999999874
No 44
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=99.75 E-value=8.3e-18 Score=153.57 Aligned_cols=201 Identities=14% Similarity=0.151 Sum_probs=134.9
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHH--------HHHHHHHHHHcCCCChhhhcccCCceEEec
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKS--------ISSSIQKFVSKGQLSQAMGTDAPRRLRCTS 77 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 77 (297)
-+|+|||+|.||.++|.+|+++||+|++||+++++++.+.+. +...+.+.+ ...++++++
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~------------~~g~l~~tt 76 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNV------------KAGRLSFTT 76 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHH------------HTTCEEEES
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhc------------ccCCEEEEC
Confidence 489999999999999999999999999999999998876331 001111101 135578899
Q ss_pred Cccc-ccCCcEEEEecccCHH---------HHHHHHHHHHhhccCCeEEeecCCCccH---HHHhhhc----CCCCeEEE
Q 022407 78 NLKD-LHSADIIVEAIVESED---------VKKKLFSELDKITKASAILASNTSSISI---TRLASAT----SRPCQVIG 140 (297)
Q Consensus 78 ~~~~-~~~aD~Vi~~v~e~~~---------~k~~~~~~l~~~~~~~~ii~s~ts~~~~---~~l~~~~----~~~~~~~g 140 (297)
|+++ +++||+||.|||++.. ..+.+.+.+.+.++++++++.. |++++ +++.+.+ ....-.+.
T Consensus 77 d~~ea~~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~-STv~pgtt~~l~~~l~e~~~~~d~~v~ 155 (446)
T 4a7p_A 77 DLAEGVKDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTK-STVPVGTGDEVERIIAEVAPNSGAKVV 155 (446)
T ss_dssp CHHHHHTTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEEC-SCCCTTHHHHHHHHHHHHSTTSCCEEE
T ss_pred CHHHHHhcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEe-CCCCchHHHHHHHHHHHhCCCCCceEE
Confidence 9865 8999999999987652 3566778888888888877643 35554 2333322 11111111
Q ss_pred eecCCCCCCCcc---------eeEecCCCChHHHHHHHHHHHHHhCCe---EEEeccchh----hhHHHHH----HHHHH
Q 022407 141 MHFMNPPPLMKL---------VEVIRGADTSDETFRATKALAERFGKT---VVCSQDYAG----FIVNRIL----MPMIN 200 (297)
Q Consensus 141 ~h~~~p~~~~~~---------vev~~~~~~~~~~~~~~~~l~~~lG~~---~v~~~d~~g----~i~nri~----~~~~~ 200 (297)
++|....+. ..++.| ..++++.+.++++++.+++. ++++.+..+ .++++.+ .+++|
T Consensus 156 ---~~Pe~a~eG~a~~d~~~p~~ivvG-~~~~~~~~~~~~ly~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~n 231 (446)
T 4a7p_A 156 ---SNPEFLREGAAIEDFKRPDRVVVG-TEDEFARQVMREIYRPLSLNQSAPVLFTGRRTSELIKYAANAFLAVKITFIN 231 (446)
T ss_dssp ---ECCCCCCTTSHHHHHHSCSCEEEE-CSCHHHHHHHHHHHCSCC-----CEEEECHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---eCcccccccchhhhccCCCEEEEe-CCcHHHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 133322221 134444 24588999999999998875 567766422 2555554 36789
Q ss_pred HHHHHHHcCCCCHHHHHHHHhhc
Q 022407 201 EAFFTLYTGVATKEDIDAGMKLG 223 (297)
Q Consensus 201 Ea~~l~~~g~~~~~~id~a~~~g 223 (297)
|+..++++-+++++++-.++..+
T Consensus 232 E~~~l~~~~GiD~~~v~~~~~~~ 254 (446)
T 4a7p_A 232 EIADLCEQVGADVQEVSRGIGMD 254 (446)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHTS
T ss_pred HHHHHHHHcCCCHHHHHHHHhcC
Confidence 99999999889999988777543
No 45
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.74 E-value=2.9e-18 Score=149.42 Aligned_cols=188 Identities=23% Similarity=0.273 Sum_probs=131.9
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
+||+|||+|.||..+|..|+++|++|++||+++++++.+ .+.| ++..+++++ +++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~-----------~~~g-------------~~~~~~~~~~~~~ 56 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEF-----------QDAG-------------EQVVSSPADVAEK 56 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHH-----------HTTT-------------CEECSSHHHHHHH
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----------HHcC-------------CeecCCHHHHHhc
Confidence 379999999999999999999999999999999887665 2223 245566665 788
Q ss_pred CcEEEEecccCHHHHHHHHHH---HHhhccCCeEEeecCCCccHHH---HhhhcCCCCeEEEeecCCCCCCC-------c
Q 022407 85 ADIIVEAIVESEDVKKKLFSE---LDKITKASAILASNTSSISITR---LASATSRPCQVIGMHFMNPPPLM-------K 151 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~---l~~~~~~~~ii~s~ts~~~~~~---l~~~~~~~~~~~g~h~~~p~~~~-------~ 151 (297)
+|+||.|+|.+..++. ++.+ +.+.+++++++++ ++++++.. +.+.+... +.+|.+.|... +
T Consensus 57 ~Dvvi~~vp~~~~~~~-v~~~~~~~~~~l~~~~~vv~-~s~~~~~~~~~~~~~~~~~----g~~~~~~p~~~g~~~a~~~ 130 (296)
T 2gf2_A 57 ADRIITMLPTSINAIE-AYSGANGILKKVKKGSLLID-SSTIDPAVSKELAKEVEKM----GAVFMDAPVSGGVGAARSG 130 (296)
T ss_dssp CSEEEECCSSHHHHHH-HHHSTTSGGGTCCTTCEEEE-CSCCCHHHHHHHHHHHHHT----TCEEEECCEESHHHHHHHT
T ss_pred CCEEEEeCCCHHHHHH-HHhCchhHHhcCCCCCEEEE-CCCCCHHHHHHHHHHHHHc----CCEEEEcCCCCChhHHhcC
Confidence 9999999987766544 4443 3345677888887 77777643 32333211 22333333111 1
Q ss_pred ceeEecCCCChHHHHHHHHHHHHHhCCeEEEeccc-hhh---hHHHHHH----HHHHHHHHHHHcCCCCHHHHHHHHhhc
Q 022407 152 LVEVIRGADTSDETFRATKALAERFGKTVVCSQDY-AGF---IVNRILM----PMINEAFFTLYTGVATKEDIDAGMKLG 223 (297)
Q Consensus 152 ~vev~~~~~~~~~~~~~~~~l~~~lG~~~v~~~d~-~g~---i~nri~~----~~~~Ea~~l~~~g~~~~~~id~a~~~g 223 (297)
...++.+ ++++.++.++++|+.+|..++++++. .+. ++++.+. .+++|++.++++.++++++++.++..+
T Consensus 131 ~~~~~~~--~~~~~~~~v~~l~~~~g~~~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~~~~~~G~~~~~~~~~~~~~ 208 (296)
T 2gf2_A 131 NLTFMVG--GVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLDPKLLAKILNMS 208 (296)
T ss_dssp CEEEEEE--SCGGGHHHHHHHHTTTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTS
T ss_pred cEEEEeC--CCHHHHHHHHHHHHHHcCCeEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhC
Confidence 2345544 56889999999999999998887652 222 4555553 578999999988888999999888765
Q ss_pred cC
Q 022407 224 TN 225 (297)
Q Consensus 224 ~g 225 (297)
.|
T Consensus 209 ~~ 210 (296)
T 2gf2_A 209 SG 210 (296)
T ss_dssp TT
T ss_pred cc
Confidence 43
No 46
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=99.74 E-value=4.8e-16 Score=141.00 Aligned_cols=196 Identities=14% Similarity=0.180 Sum_probs=132.7
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHH--------HHHHHHHHHHcCCCChhhhcccCCceEEec
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKS--------ISSSIQKFVSKGQLSQAMGTDAPRRLRCTS 77 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 77 (297)
.|..|||+|.||.++|.+|+++||+|++||+++++++.+.+. +...+.+.+. ..++++++
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~------------~g~l~~tt 79 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLS------------SGKLKVST 79 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHH------------TTCEEEES
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcc------------cCceEEeC
Confidence 589999999999999999999999999999999999886431 1111111111 24567777
Q ss_pred CcccccCCcEEEEecccCHH----------HHHHHHHHHHhhccCCeEEeecCCCccH---HHHhhhc-C-CC----CeE
Q 022407 78 NLKDLHSADIIVEAIVESED----------VKKKLFSELDKITKASAILASNTSSISI---TRLASAT-S-RP----CQV 138 (297)
Q Consensus 78 ~~~~~~~aD~Vi~~v~e~~~----------~k~~~~~~l~~~~~~~~ii~s~ts~~~~---~~l~~~~-~-~~----~~~ 138 (297)
++ ++||+||.|||++.. ......+.+.+.++++++++ ..||+++ +++...+ . .+ ..+
T Consensus 80 d~---~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV-~~STV~pgtt~~v~~~i~e~~g~~~~~d~ 155 (431)
T 3ojo_A 80 TP---EASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTII-VESTIAPKTMDDFVKPVIENLGFTIGEDI 155 (431)
T ss_dssp SC---CCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEE-ECSCCCTTHHHHTHHHHHHTTTCCBTTTE
T ss_pred ch---hhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEE-EecCCChhHHHHHHHHHHHHcCCCcCCCe
Confidence 63 579999999998762 23445567888888888766 3345544 2333221 1 11 111
Q ss_pred EEeecCCCCCCCcc---------eeEecCCCChHHHHHHHHHHHHHhCCeEEEeccc-hh---hhHHHHH----HHHHHH
Q 022407 139 IGMHFMNPPPLMKL---------VEVIRGADTSDETFRATKALAERFGKTVVCSQDY-AG---FIVNRIL----MPMINE 201 (297)
Q Consensus 139 ~g~h~~~p~~~~~~---------vev~~~~~~~~~~~~~~~~l~~~lG~~~v~~~d~-~g---~i~nri~----~~~~~E 201 (297)
.-. ++|....+. ..|+.| .++++.++++++++.+++.++++++. .+ .++|+++ .+++||
T Consensus 156 ~v~--~~Pe~~~~G~A~~~~~~p~~Iv~G--~~~~~~~~~~~ly~~~~~~~~~~~~~~~AE~~Kl~~N~~~a~~Ia~~nE 231 (431)
T 3ojo_A 156 YLV--HCPERVLPGKILEELVHNNRIIGG--VTKACIEAGKRVYRTFVQGEMIETDARTAEMSKLMENTYRDVNIALANE 231 (431)
T ss_dssp EEE--ECCCCCCTTSHHHHHHHSCEEEEE--SSHHHHHHHHHHHTTTCCSCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEE--ECCCcCCCcchhhcccCCCEEEEe--CCHHHHHHHHHHHHHHhCCcEEeCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 234333221 146665 47899999999999999888777653 22 3666665 367999
Q ss_pred HHHHHHcCCCCHHHHHHHHh
Q 022407 202 AFFTLYTGVATKEDIDAGMK 221 (297)
Q Consensus 202 a~~l~~~g~~~~~~id~a~~ 221 (297)
++.++++.+++++++-.++.
T Consensus 232 ~~~l~e~~GiD~~~v~~~~~ 251 (431)
T 3ojo_A 232 LTKICNNLNINVLDVIEMAN 251 (431)
T ss_dssp HHHHHHHTTCCHHHHHHHHT
T ss_pred HHHHHHHcCCCHHHHHHHHc
Confidence 99999998899988877765
No 47
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.74 E-value=6.5e-17 Score=142.81 Aligned_cols=155 Identities=15% Similarity=0.140 Sum_probs=114.0
Q ss_pred CCCcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-
Q 022407 3 EKMKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD- 81 (297)
Q Consensus 3 ~~~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~- 81 (297)
..+++|+|||+|.||.+||..|.++|++|++||++++.++.+ .+.|. ...+++++
T Consensus 6 ~~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a-----------~~~G~-------------~~~~~~~e~ 61 (341)
T 3ktd_A 6 DISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSA-----------VDEGF-------------DVSADLEAT 61 (341)
T ss_dssp CCSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHH-----------HHTTC-------------CEESCHHHH
T ss_pred CCCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----------HHcCC-------------eeeCCHHHH
Confidence 346799999999999999999999999999999999887765 33443 23455554
Q ss_pred cc----CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCc--cHHHHhhhcCCCCeEEEeecCCCCCCCc----
Q 022407 82 LH----SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSI--SITRLASATSRPCQVIGMHFMNPPPLMK---- 151 (297)
Q Consensus 82 ~~----~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~--~~~~l~~~~~~~~~~~g~h~~~p~~~~~---- 151 (297)
++ +||+||.|+|. .....++.++.++ +++++|+..+|.- ..+.+.+.+. ..++++.||+..+...+
T Consensus 62 ~~~a~~~aDlVilavP~--~~~~~vl~~l~~~-~~~~iv~Dv~Svk~~i~~~~~~~~~-~~~~v~~HPmaG~e~sG~~aa 137 (341)
T 3ktd_A 62 LQRAAAEDALIVLAVPM--TAIDSLLDAVHTH-APNNGFTDVVSVKTAVYDAVKARNM-QHRYVGSHPMAGTANSGWSAS 137 (341)
T ss_dssp HHHHHHTTCEEEECSCH--HHHHHHHHHHHHH-CTTCCEEECCSCSHHHHHHHHHTTC-GGGEECEEECCSCC-CCGGGC
T ss_pred HHhcccCCCEEEEeCCH--HHHHHHHHHHHcc-CCCCEEEEcCCCChHHHHHHHHhCC-CCcEecCCccccccccchhhh
Confidence 43 47999999994 3466788888886 6777776443332 2245555443 46899999988764221
Q ss_pred --------ceeEecCCCChHH--------HHHHHHHHHHHhCCeEEEecc
Q 022407 152 --------LVEVIRGADTSDE--------TFRATKALAERFGKTVVCSQD 185 (297)
Q Consensus 152 --------~vev~~~~~~~~~--------~~~~~~~l~~~lG~~~v~~~d 185 (297)
.+.++++..++++ .+++++++++.+|.+++++..
T Consensus 138 ~~~Lf~g~~~iltp~~~~~~e~~~~~~~~~~~~v~~l~~~~Ga~v~~~~~ 187 (341)
T 3ktd_A 138 MDGLFKRAVWVVTFDQLFDGTDINSTWISIWKDVVQMALAVGAEVVPSRV 187 (341)
T ss_dssp CSSTTTTCEEEECCGGGTSSCCCCHHHHHHHHHHHHHHHHTTCEEEECCH
T ss_pred hhHHhcCCeEEEEeCCCCChhhhccchHHHHHHHHHHHHHcCCEEEEeCH
Confidence 2446666667777 899999999999999988853
No 48
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=99.74 E-value=1.8e-16 Score=135.65 Aligned_cols=149 Identities=17% Similarity=0.267 Sum_probs=112.2
Q ss_pred cEEEEECCChhHHHHHHHHHHCC-CcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-cc
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDG-LDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LH 83 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~ 83 (297)
+||+|||+|.||..+|..|+++| ++|++||+++++++.+.+. .| +...++.++ +
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~----------~g-------------~~~~~~~~~~~- 56 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE----------LG-------------VETSATLPELH- 56 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH----------TC-------------CEEESSCCCCC-
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHh----------cC-------------CEEeCCHHHHh-
Confidence 48999999999999999999999 9999999999887765211 13 245555555 7
Q ss_pred CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHHHHhhhcCCCCeEEEeecCCCCCCC-cceeEecCCCCh
Q 022407 84 SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPPPLM-KLVEVIRGADTS 162 (297)
Q Consensus 84 ~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~~l~~~~~~~~~~~g~h~~~p~~~~-~~vev~~~~~~~ 162 (297)
++|+||+|+| +.. ...++.++.+ + +++|++.+++++++.+.+.++.+.+++...+..|.... +...++.+..++
T Consensus 57 ~~D~vi~~v~-~~~-~~~v~~~l~~--~-~~ivv~~~~g~~~~~l~~~~~~~~~~v~~~~~~~~~~~~g~~~i~~~~~~~ 131 (263)
T 1yqg_A 57 SDDVLILAVK-PQD-MEAACKNIRT--N-GALVLSVAAGLSVGTLSRYLGGTRRIVRVMPNTPGKIGLGVSGMYAEAEVS 131 (263)
T ss_dssp TTSEEEECSC-HHH-HHHHHTTCCC--T-TCEEEECCTTCCHHHHHHHTTSCCCEEEEECCGGGGGTCEEEEEECCTTSC
T ss_pred cCCEEEEEeC-chh-HHHHHHHhcc--C-CCEEEEecCCCCHHHHHHHcCCCCcEEEEcCCHHHHHcCceEEEEcCCCCC
Confidence 9999999999 333 4556665544 4 78888888999988888877655577777444344332 245667776668
Q ss_pred HHHHHHHHHHHHHhCCeEEEec
Q 022407 163 DETFRATKALAERFGKTVVCSQ 184 (297)
Q Consensus 163 ~~~~~~~~~l~~~lG~~~v~~~ 184 (297)
++.++.+.++++.+|..+ +++
T Consensus 132 ~~~~~~~~~l~~~~g~~~-~~~ 152 (263)
T 1yqg_A 132 ETDRRIADRIMKSVGLTV-WLD 152 (263)
T ss_dssp HHHHHHHHHHHHTTEEEE-ECS
T ss_pred HHHHHHHHHHHHhCCCEE-EeC
Confidence 999999999999999876 665
No 49
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.73 E-value=1.8e-17 Score=152.40 Aligned_cols=195 Identities=14% Similarity=0.159 Sum_probs=133.8
Q ss_pred CCcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-c
Q 022407 4 KMKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-L 82 (297)
Q Consensus 4 ~~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~ 82 (297)
.+++|+|||+|.||.+||..|+++||+|++||+++++++.+ .+.+.. ..++..++++++ +
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l-----------~~~g~~--------g~~i~~~~s~~e~v 63 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDF-----------LANEAK--------GTKVVGAQSLKEMV 63 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHH-----------HHTTTT--------TSSCEECSSHHHHH
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----------HhcccC--------CCceeccCCHHHHH
Confidence 34689999999999999999999999999999999988776 333211 113445666665 3
Q ss_pred c---CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccH--HHHhhhcC-CCCeEEEeecCCCCCC-CcceeE
Q 022407 83 H---SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISI--TRLASATS-RPCQVIGMHFMNPPPL-MKLVEV 155 (297)
Q Consensus 83 ~---~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~--~~l~~~~~-~~~~~~g~h~~~p~~~-~~~vev 155 (297)
+ ++|+||.|||.+..+. .++.++.+.++++.+|+..+++.+. ..+.+.+. ...++++......+.. .....+
T Consensus 64 ~~l~~aDvVil~Vp~~~~v~-~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsGg~~gA~~G~~i 142 (484)
T 4gwg_A 64 SKLKKPRRIILLVKAGQAVD-DFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSGGEEGARYGPSL 142 (484)
T ss_dssp HTBCSSCEEEECSCSSHHHH-HHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCCEE
T ss_pred hhccCCCEEEEecCChHHHH-HHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccCCHHHHhcCCee
Confidence 3 6999999999876544 5668888888888887765555543 34443332 2344555422221110 001135
Q ss_pred ecCCCChHHHHHHHHHHHHHhCCeE-------EEeccc-hhh---hHHHHH----HHHHHHHHHHHHc-CCCCHHHHHHH
Q 022407 156 IRGADTSDETFRATKALAERFGKTV-------VCSQDY-AGF---IVNRIL----MPMINEAFFTLYT-GVATKEDIDAG 219 (297)
Q Consensus 156 ~~~~~~~~~~~~~~~~l~~~lG~~~-------v~~~d~-~g~---i~nri~----~~~~~Ea~~l~~~-g~~~~~~id~a 219 (297)
+.+ ++++++++++++|+.+|.++ +++++. .|. ++++.+ ...++|++.++++ .+++++++..+
T Consensus 143 m~G--G~~ea~~~v~pll~~ig~~v~~~~~~~~~~G~~Gag~~vKmv~N~i~~~~m~~iaEa~~l~~~~~Gld~~~l~~v 220 (484)
T 4gwg_A 143 MPG--GNKEAWPHIKTIFQGIAAKVGTGEPCCDWVGDEGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGMAQDEMAQA 220 (484)
T ss_dssp EEE--ECGGGHHHHHHHHHHHSCBCTTSCBSBCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHH
T ss_pred ecC--CCHHHHHHHHHHHHHhcCcccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHH
Confidence 554 57899999999999999987 677652 332 445443 3578999999998 77898888776
Q ss_pred H
Q 022407 220 M 220 (297)
Q Consensus 220 ~ 220 (297)
+
T Consensus 221 ~ 221 (484)
T 4gwg_A 221 F 221 (484)
T ss_dssp H
T ss_pred H
Confidence 5
No 50
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=99.73 E-value=2.4e-16 Score=138.15 Aligned_cols=195 Identities=14% Similarity=0.139 Sum_probs=128.5
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc---
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD--- 81 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~--- 81 (297)
++||+|||+|.||..+|..|+++|++|++||+++++++.+. +.|............++..+++.+.
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~-----------~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIR-----------KNGLIADFNGEEVVANLPIFSPEEIDHQ 71 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HHCEEEEETTEEEEECCCEECGGGCCTT
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHH-----------hCCEEEEeCCCeeEecceeecchhhccc
Confidence 36899999999999999999999999999999998876652 2231100000000112223332222
Q ss_pred ccCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccH-HHHhhhcCCCCeEE-EeecCCCCCCC---------
Q 022407 82 LHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISI-TRLASATSRPCQVI-GMHFMNPPPLM--------- 150 (297)
Q Consensus 82 ~~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~-~~l~~~~~~~~~~~-g~h~~~p~~~~--------- 150 (297)
++++|+||.|+|.+. ...++.++.+.++++++|++.+++++. +.+.+.++. .+++ +.+++.++...
T Consensus 72 ~~~~d~vi~~v~~~~--~~~v~~~l~~~l~~~~~iv~~~~g~~~~~~l~~~~~~-~~vi~g~~~~~~~~~~p~~~~~~~~ 148 (316)
T 2ew2_A 72 NEQVDLIIALTKAQQ--LDAMFKAIQPMITEKTYVLCLLNGLGHEDVLEKYVPK-ENILVGITMWTAGLEGPGRVKLLGD 148 (316)
T ss_dssp SCCCSEEEECSCHHH--HHHHHHHHGGGCCTTCEEEECCSSSCTHHHHTTTSCG-GGEEEEEECCCCEEEETTEEEECSC
T ss_pred CCCCCEEEEEecccc--HHHHHHHHHHhcCCCCEEEEecCCCCcHHHHHHHcCC-ccEEEEEeeeeeEEcCCCEEEEecC
Confidence 348999999998653 567888899888889988888888876 556666543 3566 44443332111
Q ss_pred cceeEecCCCChHHHHHHHHHHHHHhCCeEEEeccchh-----hhHH------------------------HHHHHHHHH
Q 022407 151 KLVEVIRGADTSDETFRATKALAERFGKTVVCSQDYAG-----FIVN------------------------RILMPMINE 201 (297)
Q Consensus 151 ~~vev~~~~~~~~~~~~~~~~l~~~lG~~~v~~~d~~g-----~i~n------------------------ri~~~~~~E 201 (297)
+.+.+....+++++..+.+.++|+.+|..+++.+|..+ ++.| .++...+.|
T Consensus 149 g~~~i~~~~~~~~~~~~~~~~ll~~~g~~~~~~~d~~~~~~~Kl~~N~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~E 228 (316)
T 2ew2_A 149 GEIELENIDPSGKKFALEVVDVFQKAGLNPSYSSNVRYSIWRKACVNGTLNGLCTILDCNIAEFGALPVSESLVKTLISE 228 (316)
T ss_dssp CCEEEEESSGGGHHHHHHHHHHHHHTTCCEEECTTHHHHHHHHHHHHTTHHHHHHHHTCCHHHHHTSTTHHHHHHHHHHH
T ss_pred CcEEEeecCCCccHHHHHHHHHHHhCCCCcEEchhHHHHHHHHHHHhhhHHHHHHHhCCcHHHHHhCHHHHHHHHHHHHH
Confidence 12334444557889999999999999998888776422 1222 334566778
Q ss_pred HHHHHHcCCCCH
Q 022407 202 AFFTLYTGVATK 213 (297)
Q Consensus 202 a~~l~~~g~~~~ 213 (297)
+..+++.-++++
T Consensus 229 ~~~la~~~G~~~ 240 (316)
T 2ew2_A 229 FAAVAEKEAIYL 240 (316)
T ss_dssp HHHHHHHTTCCC
T ss_pred HHHHHHHcCCCC
Confidence 888877654553
No 51
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.73 E-value=1.4e-17 Score=144.94 Aligned_cols=189 Identities=19% Similarity=0.250 Sum_probs=130.6
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-cc
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LH 83 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~ 83 (297)
++||+|||+|.||..+|..|+++|++|++|| ++++++.+ .+.|. ...+++++ ++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~-----------~~~g~-------------~~~~~~~~~~~ 57 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGPVADEL-----------LSLGA-------------VNVETARQVTE 57 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSCCCHHH-----------HTTTC-------------BCCSSHHHHHH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHH-----------HHcCC-------------cccCCHHHHHh
Confidence 3689999999999999999999999999999 88776654 22231 23455655 78
Q ss_pred CCcEEEEecccCHHHHHHHHH--HHHhhccCCeEEeecCCCcc--HHHHhhhcCCCCeEEEeecCCCCCCCc-------c
Q 022407 84 SADIIVEAIVESEDVKKKLFS--ELDKITKASAILASNTSSIS--ITRLASATSRPCQVIGMHFMNPPPLMK-------L 152 (297)
Q Consensus 84 ~aD~Vi~~v~e~~~~k~~~~~--~l~~~~~~~~ii~s~ts~~~--~~~l~~~~~~~~~~~g~h~~~p~~~~~-------~ 152 (297)
++|+||.|+|.+.+++..+.. ++.+.++++++|++.+++.+ .+++.+.+... +.||++.|...+ .
T Consensus 58 ~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~----g~~~~~~p~~~~~~~a~~g~ 133 (295)
T 1yb4_A 58 FADIIFIMVPDTPQVEDVLFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQRVNEM----GADYLDAPVSGGEIGAREGT 133 (295)
T ss_dssp TCSEEEECCSSHHHHHHHHHSTTSSTTSCCTTEEEEECSCCCHHHHHHHHHHHHTT----TEEEEECCEESHHHHHHHTC
T ss_pred cCCEEEEECCCHHHHHHHHhCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHc----CCeEEEccCCCCHHHHHcCC
Confidence 999999999987765543332 56667778888876655533 34566555321 334444332111 1
Q ss_pred eeEecCCCChHHHHHHHHHHHHHhCCeEEEecc-chhh---hHHHHH----HHHHHHHHHHHHcCCCCHHHHHHHHhhcc
Q 022407 153 VEVIRGADTSDETFRATKALAERFGKTVVCSQD-YAGF---IVNRIL----MPMINEAFFTLYTGVATKEDIDAGMKLGT 224 (297)
Q Consensus 153 vev~~~~~~~~~~~~~~~~l~~~lG~~~v~~~d-~~g~---i~nri~----~~~~~Ea~~l~~~g~~~~~~id~a~~~g~ 224 (297)
..++.+ ++++.++++.++|+.+|.+++++++ ..+. ++++.+ ...++|++.++++.+++++++...+..+.
T Consensus 134 ~~~~~~--~~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~E~~~l~~~~G~~~~~~~~~~~~~~ 211 (295)
T 1yb4_A 134 LSIMVG--GEQKVFDRVKPLFDILGKNITLVGGNGDGQTCKVANQIIVALNIEAVSEALVFASKAGADPVRVRQALMGGF 211 (295)
T ss_dssp EEEEEE--SCHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTSSS
T ss_pred eEEEEC--CCHHHHHHHHHHHHHhcCCEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCC
Confidence 223333 3788999999999999999888865 3332 333333 35789999999988889999888876544
No 52
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.73 E-value=1.6e-17 Score=154.01 Aligned_cols=194 Identities=14% Similarity=0.156 Sum_probs=133.6
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
.+|+|||+|.||.+||..|+++||+|++||+++++++.+.+. ... ...+..++++++ +++
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~----------~~~---------~~gi~~~~s~~e~v~~ 71 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLAN----------EAK---------GKSIIGATSIEDFISK 71 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHT----------TTT---------TSSEECCSSHHHHHHT
T ss_pred CCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcc----------ccc---------CCCeEEeCCHHHHHhc
Confidence 589999999999999999999999999999999988776210 100 012455667765 555
Q ss_pred ---CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccH--HHHhhhcC-CCCeEEEeecCCCCCC-CcceeEec
Q 022407 85 ---ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISI--TRLASATS-RPCQVIGMHFMNPPPL-MKLVEVIR 157 (297)
Q Consensus 85 ---aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~--~~l~~~~~-~~~~~~g~h~~~p~~~-~~~vev~~ 157 (297)
||+||.|||.+..++ .++.++.+.++++.+|++.+++.+. ..+.+.+. ...+++++.....|.. .....++.
T Consensus 72 l~~aDvVil~Vp~~~~v~-~vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v~~pVsgg~~~a~~G~~im~ 150 (497)
T 2p4q_A 72 LKRPRKVMLLVKAGAPVD-ALINQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVGSGVSGGEEGARYGPSLMP 150 (497)
T ss_dssp SCSSCEEEECCCSSHHHH-HHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCCEEEE
T ss_pred CCCCCEEEEEcCChHHHH-HHHHHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCceeCCCcccChhHhhcCCeEEe
Confidence 999999999876644 5567888888888887765555543 34554442 2334554432222210 00113555
Q ss_pred CCCChHHHHHHHHHHHHHhCCe------EEEecc-chhh----hHHHHH---HHHHHHHHHHHHcC-CCCHHHHHHHHh
Q 022407 158 GADTSDETFRATKALAERFGKT------VVCSQD-YAGF----IVNRIL---MPMINEAFFTLYTG-VATKEDIDAGMK 221 (297)
Q Consensus 158 ~~~~~~~~~~~~~~l~~~lG~~------~v~~~d-~~g~----i~nri~---~~~~~Ea~~l~~~g-~~~~~~id~a~~ 221 (297)
+ ++++++++++++|+.+|.+ ++++++ ..|. +.|.+. ...++|++.++++. +++++++..++.
T Consensus 151 g--g~~e~~~~v~~ll~~~g~~~dGe~~v~~vg~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lGl~~~~~~~~~~ 227 (497)
T 2p4q_A 151 G--GSEEAWPHIKNIFQSISAKSDGEPCCEWVGPAGAGHYVKMVHNGIEYGDMQLICEAYDIMKRLGGFTDKEISDVFA 227 (497)
T ss_dssp E--ECGGGHHHHHHHHHHHSCEETTEESCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHH
T ss_pred c--CCHHHHHHHHHHHHHhcCccCCCCceEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHH
Confidence 4 5788999999999999998 566653 3443 445543 46789999999983 689998887763
No 53
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=99.72 E-value=8.1e-17 Score=143.43 Aligned_cols=197 Identities=14% Similarity=0.159 Sum_probs=134.2
Q ss_pred CCCCCcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChh-hhcccCCceEEecCc
Q 022407 1 MEEKMKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQA-MGTDAPRRLRCTSNL 79 (297)
Q Consensus 1 M~~~~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~~~ 79 (297)
|....+||+|||+|.||.++|..|+++|++|++||+++++++.+.+ .+..... .-.....++.+++++
T Consensus 25 m~~~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~-----------~~~~~~~l~g~~l~~~i~~t~d~ 93 (356)
T 3k96_A 25 MEPFKHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQA-----------EGVNNRYLPNYPFPETLKAYCDL 93 (356)
T ss_dssp --CCCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHH-----------HSSBTTTBTTCCCCTTEEEESCH
T ss_pred ccccCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-----------cCCCcccCCCCccCCCeEEECCH
Confidence 4444579999999999999999999999999999999988776532 2210000 000123457788888
Q ss_pred cc-ccCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHH------HHhhhcCCCCeEEEeecCCCCCCC--
Q 022407 80 KD-LHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISIT------RLASATSRPCQVIGMHFMNPPPLM-- 150 (297)
Q Consensus 80 ~~-~~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~------~l~~~~~~~~~~~g~h~~~p~~~~-- 150 (297)
++ +++||+||.++|.. ..+.+++++.+++++++++++.++++.+. .+.+.++. ..+. ....|...
T Consensus 94 ~ea~~~aDvVilaVp~~--~~~~vl~~i~~~l~~~~ivvs~~kGi~~~t~~~se~i~~~l~~-~~~~---vlsgP~~a~e 167 (356)
T 3k96_A 94 KASLEGVTDILIVVPSF--AFHEVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATELGQ-VPMA---VISGPSLATE 167 (356)
T ss_dssp HHHHTTCCEEEECCCHH--HHHHHHHHHGGGCCTTCEEEECCCSCBTTTBCHHHHHHHHHCS-CCEE---EEESSCCHHH
T ss_pred HHHHhcCCEEEECCCHH--HHHHHHHHHHHhcCCCCEEEEEeCCCCcCccCHHHHHHHHcCC-CCEE---EEECccHHHH
Confidence 65 88999999999865 47788999999999999999888887764 34454442 1221 11222211
Q ss_pred -----cceeEecCCCChHHHHHHHHHHHHHhCCeEEEeccchhh-----h----------------HH----HHHHHHHH
Q 022407 151 -----KLVEVIRGADTSDETFRATKALAERFGKTVVCSQDYAGF-----I----------------VN----RILMPMIN 200 (297)
Q Consensus 151 -----~~vev~~~~~~~~~~~~~~~~l~~~lG~~~v~~~d~~g~-----i----------------~n----ri~~~~~~ 200 (297)
+...++.+ .+++..+.+.++|...+.++++..|..|. + .+ .++...++
T Consensus 168 v~~g~pt~~via~--~~~~~~~~v~~lf~~~~~rv~~~~Di~g~e~~galkNviaia~G~~~gl~~g~N~~aal~~~~l~ 245 (356)
T 3k96_A 168 VAANLPTAVSLAS--NNSQFSKDLIERLHGQRFRVYKNDDMIGVELCGSVKNILAIATGISDGLKLGSNARAALITRGLT 245 (356)
T ss_dssp HHTTCCEEEEEEE--SCHHHHHHHHHHHCCSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHcCCCeEEEEec--CCHHHHHHHHHHhCCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHH
Confidence 11222222 57889999999999999999888886541 1 11 12234578
Q ss_pred HHHHHHHcCCCCHHHH
Q 022407 201 EAFFTLYTGVATKEDI 216 (297)
Q Consensus 201 Ea~~l~~~g~~~~~~i 216 (297)
|+.++.+.-+++++.+
T Consensus 246 E~~~l~~a~G~~~~t~ 261 (356)
T 3k96_A 246 EMGRLVSVFGGKQETL 261 (356)
T ss_dssp HHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHhCCChHhh
Confidence 9999988877777754
No 54
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=99.72 E-value=4.4e-17 Score=150.56 Aligned_cols=206 Identities=14% Similarity=0.209 Sum_probs=136.0
Q ss_pred CcEEEEECCChhHHHHHHHHHHC--CCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCC--hhh----h-cccCCceEE
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMD--GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLS--QAM----G-TDAPRRLRC 75 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~--G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~----~-~~~~~~i~~ 75 (297)
++||+|||+|.||.++|..|+++ |++|++||+++++++.+.+ |... ... . .....++++
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~------------g~~~i~e~~l~~~~~~~~~~~~~~ 72 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNS------------PTLPIYEPGLKEVVESCRGKNLFF 72 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTS------------SSCSSCCTTHHHHHHHHBTTTEEE
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhC------------CCCCcCCCCHHHHHHHhhcCCEEE
Confidence 47999999999999999999998 8999999999998876521 1110 000 0 001134677
Q ss_pred ecCccc-ccCCcEEEEecccCHHH-------------HHHHHHHHHhhccCCeEEeecCCCccH---HHHhhhcCCCC-e
Q 022407 76 TSNLKD-LHSADIIVEAIVESEDV-------------KKKLFSELDKITKASAILASNTSSISI---TRLASATSRPC-Q 137 (297)
Q Consensus 76 ~~~~~~-~~~aD~Vi~~v~e~~~~-------------k~~~~~~l~~~~~~~~ii~s~ts~~~~---~~l~~~~~~~~-~ 137 (297)
++++++ +++||+||+|+|++... ...+.+.+.+.++++++|+. +|++++ +.+.+.+.... .
T Consensus 73 t~~~~e~~~~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~-~STv~~g~~~~l~~~l~~~~~~ 151 (467)
T 2q3e_A 73 STNIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTE-KSTVPVRAAESIRRIFDANTKP 151 (467)
T ss_dssp ESCHHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEE-CSCCCTTHHHHHHHHHHHTCCT
T ss_pred ECCHHHHHhcCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEE-CCcCCchHHHHHHHHHHHhCCC
Confidence 788765 88999999999876532 34566778888888887763 333332 33444332110 0
Q ss_pred EEEee-cCCCCCCCccee---------Ee-cCCC--ChHHHHHHHHHHHHHh-CCeEEEeccc-----hhhhHHHHH---
Q 022407 138 VIGMH-FMNPPPLMKLVE---------VI-RGAD--TSDETFRATKALAERF-GKTVVCSQDY-----AGFIVNRIL--- 195 (297)
Q Consensus 138 ~~g~h-~~~p~~~~~~ve---------v~-~~~~--~~~~~~~~~~~l~~~l-G~~~v~~~d~-----~g~i~nri~--- 195 (297)
.+..+ .++|....+... ++ .++. .++++.+.+.++++.+ |..++++.+. ..++.|.++
T Consensus 152 ~~d~~V~~~Pe~~~~G~~~~d~~~~~rivvGg~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~ae~~Kl~~N~~~a~~ 231 (467)
T 2q3e_A 152 NLNLQVLSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQR 231 (467)
T ss_dssp TCEEEEEECCCCCCTTSHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHHTTTSCGGGEEEECHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEeCHHHhhcccchhhccCCCEEEECCCCCCCCHHHHHHHHHHHHHhccCCeEEecCHHHHHHHHHHHHHHHHHH
Confidence 01111 234544433221 43 3322 3788999999999998 7777777653 234666653
Q ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHhhc
Q 022407 196 MPMINEAFFTLYTGVATKEDIDAGMKLG 223 (297)
Q Consensus 196 ~~~~~Ea~~l~~~g~~~~~~id~a~~~g 223 (297)
.+++||++.++++.+++++++..++...
T Consensus 232 ia~~nE~~~l~~~~Gid~~~v~~~~~~~ 259 (467)
T 2q3e_A 232 ISSINSISALCEATGADVEEVATAIGMD 259 (467)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhCcCHHHHHHHHcCC
Confidence 5789999999999889999999887653
No 55
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.71 E-value=1.2e-15 Score=131.68 Aligned_cols=153 Identities=18% Similarity=0.144 Sum_probs=113.4
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcccccCC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHSA 85 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~a 85 (297)
|+|+|||+|.||..+|..|.++|++|++||+++++++.+ .+.|.. ....+++++++++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~-----------~~~g~~-----------~~~~~~~~~~~~~ 58 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKA-----------VERQLV-----------DEAGQDLSLLQTA 58 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-----------HHTTSC-----------SEEESCGGGGTTC
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-----------HhCCCC-----------ccccCCHHHhCCC
Confidence 489999999999999999999999999999999877665 223321 0234555555889
Q ss_pred cEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccH---HHHhhhcCCCCeEEEeecCCCCCC------------C
Q 022407 86 DIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISI---TRLASATSRPCQVIGMHFMNPPPL------------M 150 (297)
Q Consensus 86 D~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~---~~l~~~~~~~~~~~g~h~~~p~~~------------~ 150 (297)
|+||.|+|.+ ....++.++.+.++++++|++. ++... +.+.+.+ .++++.|++..+.. .
T Consensus 59 D~vi~av~~~--~~~~~~~~l~~~~~~~~~vv~~-~~~~~~~~~~~~~~~---~~~~~~~p~~g~~~~gp~~a~~~~~~g 132 (279)
T 2f1k_A 59 KIIFLCTPIQ--LILPTLEKLIPHLSPTAIVTDV-ASVKTAIAEPASQLW---SGFIGGHPMAGTAAQGIDGAEENLFVN 132 (279)
T ss_dssp SEEEECSCHH--HHHHHHHHHGGGSCTTCEEEEC-CSCCHHHHHHHHHHS---TTCEEEEECCCCSCSSGGGCCTTTTTT
T ss_pred CEEEEECCHH--HHHHHHHHHHhhCCCCCEEEEC-CCCcHHHHHHHHHHh---CCEeecCcccCCccCCHHHHhHHHhCC
Confidence 9999999854 3567888888888888888764 44443 3344433 27888888763211 1
Q ss_pred cceeEecCCCChHHHHHHHHHHHHHhCCeEEEeccc
Q 022407 151 KLVEVIRGADTSDETFRATKALAERFGKTVVCSQDY 186 (297)
Q Consensus 151 ~~vev~~~~~~~~~~~~~~~~l~~~lG~~~v~~~d~ 186 (297)
....++++..++++..+.+.++|+.+|.+++++++.
T Consensus 133 ~~~~~~~~~~~~~~~~~~v~~l~~~~g~~~~~~~~~ 168 (279)
T 2f1k_A 133 APYVLTPTEYTDPEQLACLRSVLEPLGVKIYLCTPA 168 (279)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHGGGTCEEEECCHH
T ss_pred CcEEEecCCCCCHHHHHHHHHHHHHcCCEEEEcCHH
Confidence 145566666678999999999999999999888653
No 56
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.70 E-value=4.6e-16 Score=132.88 Aligned_cols=187 Identities=13% Similarity=0.126 Sum_probs=127.4
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-cc
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LH 83 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~ 83 (297)
++||+|||+|.||..++..|.+.|++|.+||+++++++.+.+. .|. ...+++++ ++
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~----------~g~-------------~~~~~~~~~~~ 59 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQ----------LAL-------------PYAMSHQDLID 59 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHH----------HTC-------------CBCSSHHHHHH
T ss_pred ccEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHH----------cCC-------------EeeCCHHHHHh
Confidence 4689999999999999999999999999999999887665221 121 23455655 77
Q ss_pred CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHHHHhhhcCCCCeEEEeecCCCCCCCc-ceeEecCCCCh
Q 022407 84 SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPPPLMK-LVEVIRGADTS 162 (297)
Q Consensus 84 ~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~~l~~~~~~~~~~~g~h~~~p~~~~~-~vev~~~~~~~ 162 (297)
++|+||.|+|... ..+++.++ .+++++++.+++++++.+.+.++...+++..++..|..... ...++.+..++
T Consensus 60 ~~D~Vi~~v~~~~--~~~v~~~l----~~~~~vv~~~~~~~~~~l~~~~~~~~~~v~~~p~~~~~~~~g~~~i~~~~~~~ 133 (259)
T 2ahr_A 60 QVDLVILGIKPQL--FETVLKPL----HFKQPIISMAAGISLQRLATFVGQDLPLLRIMPNMNAQILQSSTALTGNALVS 133 (259)
T ss_dssp TCSEEEECSCGGG--HHHHHTTS----CCCSCEEECCTTCCHHHHHHHHCTTSCEEEEECCGGGGGTCEEEEEEECTTCC
T ss_pred cCCEEEEEeCcHh--HHHHHHHh----ccCCEEEEeCCCCCHHHHHHhcCCCCCEEEEcCCchHHHcCceEEEEcCCCCC
Confidence 9999999998432 33444433 36678888888888888887776555777777666654333 45567776679
Q ss_pred HHHHHHHHHHHHHhCCeEEEeccch-hhh------HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHh
Q 022407 163 DETFRATKALAERFGKTVVCSQDYA-GFI------VNRILMPMINEAFFTLYTGVATKEDIDAGMK 221 (297)
Q Consensus 163 ~~~~~~~~~l~~~lG~~~v~~~d~~-g~i------~nri~~~~~~Ea~~l~~~g~~~~~~id~a~~ 221 (297)
++.++.++++|+.+| .++++++.. ..+ .+.++..++......+.+.+.++++.-.++.
T Consensus 134 ~~~~~~~~~ll~~~G-~~~~~~~~~~d~~~al~g~~~~~~~~~~~~la~~~~~~Gl~~~~~~~~~~ 198 (259)
T 2ahr_A 134 QELQARVRDLTDSFG-STFDISEKDFDTFTALAGSSPAYIYLFIEALAKAGVKNGIPKAKALEIVT 198 (259)
T ss_dssp HHHHHHHHHHHHTTE-EEEECCGGGHHHHHHHHTTHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCC-CEEEecHHHccHHHHHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 999999999999999 577775421 111 1223333333333344444567766555544
No 57
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.70 E-value=3.7e-16 Score=135.67 Aligned_cols=157 Identities=18% Similarity=0.157 Sum_probs=117.5
Q ss_pred CcEEEEECCChhHHHHHHHHHHC--CCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMD--GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD- 81 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~--G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~- 81 (297)
+++|+|||+|.||..+|..|+++ |++|++||+++++++.+ .+.|... ..++++++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~-----------~~~g~~~-----------~~~~~~~~~ 63 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIA-----------LERGIVD-----------EATADFKVF 63 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHH-----------HHTTSCS-----------EEESCTTTT
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHH-----------HHcCCcc-----------cccCCHHHh
Confidence 47999999999999999999987 68999999999877655 2333210 24556655
Q ss_pred ccCCcEEEEecccCHHHHHHHHHHHHhh-ccCCeEEeecCCCcc--HHHHhhhcCC-CCeEEEeecC------CCCCC--
Q 022407 82 LHSADIIVEAIVESEDVKKKLFSELDKI-TKASAILASNTSSIS--ITRLASATSR-PCQVIGMHFM------NPPPL-- 149 (297)
Q Consensus 82 ~~~aD~Vi~~v~e~~~~k~~~~~~l~~~-~~~~~ii~s~ts~~~--~~~l~~~~~~-~~~~~g~h~~------~p~~~-- 149 (297)
+++||+||+|+|... ...++.++.+. ++++++|++.++... .+.+.+.++. ..++++.||+ .|...
T Consensus 64 ~~~aDvVilavp~~~--~~~v~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~~v~~~P~~g~~~~g~~~a~~ 141 (290)
T 3b1f_A 64 AALADVIILAVPIKK--TIDFIKILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQFVGSHPMAGSHKSGAVAANV 141 (290)
T ss_dssp GGGCSEEEECSCHHH--HHHHHHHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCEEEEEEEC-----CCTTSCCT
T ss_pred hcCCCEEEEcCCHHH--HHHHHHHHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCEEEEeCCcCCCCcchHHHhhH
Confidence 789999999998655 36788888888 888888875443322 2566666654 6789999988 44321
Q ss_pred ----CcceeEecCCCChHHHHHHHHHHHHHhCCeEEEecc
Q 022407 150 ----MKLVEVIRGADTSDETFRATKALAERFGKTVVCSQD 185 (297)
Q Consensus 150 ----~~~vev~~~~~~~~~~~~~~~~l~~~lG~~~v~~~d 185 (297)
...+.++++..++++.++.+.++|+.+|..++++.+
T Consensus 142 ~l~~g~~~~~~~~~~~~~~~~~~v~~l~~~~G~~~~~~~~ 181 (290)
T 3b1f_A 142 NLFENAYYIFSPSCLTKPNTIPALQDLLSGLHARYVEIDA 181 (290)
T ss_dssp TTTTTSEEEEEECTTCCTTHHHHHHHHTGGGCCEEEECCH
T ss_pred HHhCCCeEEEecCCCCCHHHHHHHHHHHHHcCCEEEEcCH
Confidence 123667777778889999999999999999887754
No 58
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=99.69 E-value=3.6e-16 Score=143.33 Aligned_cols=206 Identities=12% Similarity=0.101 Sum_probs=132.0
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHH----HHHHHHHHcCCCChhhhcccCCceEEecCccc
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSIS----SSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD 81 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 81 (297)
|||+|||+|.||.++|..|+++|++|++||+++++++.+.+... ..++.++.. .....++++++++++
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~--------~~~~g~l~~t~~~~~ 72 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQ--------GRQTGRLSGTTDFKK 72 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHH--------HHHTTCEEEESCHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHh--------hcccCceEEeCCHHH
Confidence 48999999999999999999999999999999998877632100 000000000 000234678888875
Q ss_pred -ccCCcEEEEecccCHH---------HHHHHHHHHHhhccC---CeEEeec-CCCccH--HHHhhhcCC--CCeE-EEee
Q 022407 82 -LHSADIIVEAIVESED---------VKKKLFSELDKITKA---SAILASN-TSSISI--TRLASATSR--PCQV-IGMH 142 (297)
Q Consensus 82 -~~~aD~Vi~~v~e~~~---------~k~~~~~~l~~~~~~---~~ii~s~-ts~~~~--~~l~~~~~~--~~~~-~g~h 142 (297)
+++||+||+|+|++.. ++ .+++++.+.+++ +++|+.. |..+.. +.+.+.+.. +.++ +..+
T Consensus 73 ~~~~aDvviiaVptp~~~~~~~dl~~v~-~v~~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~~~g~~~~~~~~ 151 (436)
T 1mv8_A 73 AVLDSDVSFICVGTPSKKNGDLDLGYIE-TVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDCSGKKAGVDFG 151 (436)
T ss_dssp HHHTCSEEEECCCCCBCTTSSBCCHHHH-HHHHHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHHHHSCCBTTTBE
T ss_pred HhccCCEEEEEcCCCcccCCCcchHHHH-HHHHHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHHhcCcccCCcEE
Confidence 8899999999987654 44 466888888877 7776632 333322 223332211 1111 0000
Q ss_pred -cCCCCCCCcce---------eEecCCCChHHHHHHHHHHHHHhCCeEEEeccc-----hhhhHHHHH---HHHHHHHHH
Q 022407 143 -FMNPPPLMKLV---------EVIRGADTSDETFRATKALAERFGKTVVCSQDY-----AGFIVNRIL---MPMINEAFF 204 (297)
Q Consensus 143 -~~~p~~~~~~v---------ev~~~~~~~~~~~~~~~~l~~~lG~~~v~~~d~-----~g~i~nri~---~~~~~Ea~~ 204 (297)
.++|....+.. .++.+. .+++..+.+.++++.++..+++ .+. ..++.|.+. .+++||+..
T Consensus 152 v~~~Pe~~~~G~~~~~~~~~~~iv~G~-~~~~~~~~~~~l~~~~~~~v~~-~~~~~ae~~Kl~~N~~~a~~ia~~nE~~~ 229 (436)
T 1mv8_A 152 VGTNPEFLRESTAIKDYDFPPMTVIGE-LDKQTGDLLEEIYRELDAPIIR-KTVEVAEMIKYTCNVWHAAKVTFANEIGN 229 (436)
T ss_dssp EEECCCCCCTTSHHHHHHSCSCEEEEE-SSHHHHHHHHHHHTTSSSCEEE-EEHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECcccccccccchhccCCCEEEEEc-CCHHHHHHHHHHHhccCCCEEc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12444333221 355543 3588899999999999985444 443 224555543 578999999
Q ss_pred HHHcCCCCHHHHHHHHhh
Q 022407 205 TLYTGVATKEDIDAGMKL 222 (297)
Q Consensus 205 l~~~g~~~~~~id~a~~~ 222 (297)
++++.+++++++..++..
T Consensus 230 l~~~~Gid~~~v~~~~~~ 247 (436)
T 1mv8_A 230 IAKAVGVDGREVMDVICQ 247 (436)
T ss_dssp HHHHTTSCHHHHHHHHTT
T ss_pred HHHHhCCCHHHHHHHhcC
Confidence 999988999999888764
No 59
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.68 E-value=3.9e-15 Score=128.64 Aligned_cols=155 Identities=18% Similarity=0.237 Sum_probs=113.3
Q ss_pred cEEEEECCChhHHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-c
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGL--DVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-L 82 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~ 82 (297)
++|+|||+|.||..+|..|+++|+ +|++||+++++++.+ .+.|... ...+++++ +
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~-----------~~~g~~~-----------~~~~~~~~~~ 59 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKA-----------VDLGIID-----------EGTTSIAKVE 59 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHH-----------HHTTSCS-----------EEESCGGGGG
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHH-----------HHCCCcc-----------cccCCHHHHh
Confidence 589999999999999999999999 999999999877654 2334310 23455644 7
Q ss_pred c-CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCcc--HHHHhhhcCCCCeEEEeecCCCCCC----------
Q 022407 83 H-SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSIS--ITRLASATSRPCQVIGMHFMNPPPL---------- 149 (297)
Q Consensus 83 ~-~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~--~~~l~~~~~~~~~~~g~h~~~p~~~---------- 149 (297)
+ +||+||+|+|... ...++.++.+.++++++|+..++... .+.+.+.++. ++++.|++..+..
T Consensus 60 ~~~aDvVilavp~~~--~~~v~~~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~--~~v~~~p~~~~~~~gp~~a~~~l 135 (281)
T 2g5c_A 60 DFSPDFVMLSSPVRT--FREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILGK--RFVGGHPIAGTEKSGVEYSLDNL 135 (281)
T ss_dssp GTCCSEEEECSCHHH--HHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG--GEECEEEECCCSCCSGGGCCSST
T ss_pred cCCCCEEEEcCCHHH--HHHHHHHHHhhCCCCcEEEECCCCcHHHHHHHHHhccc--cceeeccccCCccCChhhhhhHH
Confidence 8 9999999998664 44777888888888887765433322 2455555532 3788888654321
Q ss_pred -Cc-ceeEecCCCChHHHHHHHHHHHHHhCCeEEEeccc
Q 022407 150 -MK-LVEVIRGADTSDETFRATKALAERFGKTVVCSQDY 186 (297)
Q Consensus 150 -~~-~vev~~~~~~~~~~~~~~~~l~~~lG~~~v~~~d~ 186 (297)
.+ .+.++++..++++.++.+.++++.+|..++++++.
T Consensus 136 ~~g~~~~~~~~~~~~~~~~~~v~~l~~~~g~~~~~~~~~ 174 (281)
T 2g5c_A 136 YEGKKVILTPTKKTDKKRLKLVKRVWEDVGGVVEYMSPE 174 (281)
T ss_dssp TTTCEEEECCCSSSCHHHHHHHHHHHHHTTCEEEECCHH
T ss_pred hCCCCEEEecCCCCCHHHHHHHHHHHHHcCCEEEEcCHH
Confidence 12 35566666788999999999999999998887653
No 60
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=99.68 E-value=5.2e-16 Score=143.67 Aligned_cols=204 Identities=13% Similarity=0.152 Sum_probs=133.0
Q ss_pred CcEEEEECCChhHHHHHHHHHHC--CCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCC--hhhhc-----ccCCceEE
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMD--GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLS--QAMGT-----DAPRRLRC 75 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~--G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~-----~~~~~i~~ 75 (297)
++||+|||+|.||.++|..|+++ |++|++||+++++++.+.+ |... ....+ ....++++
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~------------g~~~i~e~gl~~~~~~~~~~~l~~ 76 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNS------------DKLPIYEPGLDEIVFAARGRNLFF 76 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTS------------SSCSSCCTTHHHHHHHHBTTTEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHC------------CCCCcCCCCHHHHHHHhhcCCEEE
Confidence 46999999999999999999998 7999999999998887622 1110 00000 01234678
Q ss_pred ecCccc-ccCCcEEEEecccCHH-------------HHHHHHHHHHhhccCCeEEee-cCCCccH-HHHhhhcCC--C--
Q 022407 76 TSNLKD-LHSADIIVEAIVESED-------------VKKKLFSELDKITKASAILAS-NTSSISI-TRLASATSR--P-- 135 (297)
Q Consensus 76 ~~~~~~-~~~aD~Vi~~v~e~~~-------------~k~~~~~~l~~~~~~~~ii~s-~ts~~~~-~~l~~~~~~--~-- 135 (297)
++++++ +++||+||+|+|++.. ....+++.+.++++++++|+. +|..+.. +.+++.+.. .
T Consensus 77 t~~~~~~~~~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~~~~~~ 156 (481)
T 2o3j_A 77 SSDIPKAIAEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKAAESIGCILREAQKNN 156 (481)
T ss_dssp ESCHHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHTC--
T ss_pred ECCHHHHhhcCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHHhhCcC
Confidence 888754 8899999999987542 356677888888888887763 2333332 334433321 1
Q ss_pred --Ce-EEEeecCCCCCCCcc---------eeEecCCCC---hHHHHHHHHHHHHHhCC-eEEEeccch-----hhhHHHH
Q 022407 136 --CQ-VIGMHFMNPPPLMKL---------VEVIRGADT---SDETFRATKALAERFGK-TVVCSQDYA-----GFIVNRI 194 (297)
Q Consensus 136 --~~-~~g~h~~~p~~~~~~---------vev~~~~~~---~~~~~~~~~~l~~~lG~-~~v~~~d~~-----g~i~nri 194 (297)
.. .+.. +|....+. ..++.|... ++++++.++++++.++. .++++.+.. .++.|.+
T Consensus 157 ~~~d~~v~~---~Pe~~~~G~a~~~~~~~~~iviG~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~d~~~ae~~Kl~~N~~ 233 (481)
T 2o3j_A 157 ENLKFQVLS---NPEFLAEGTAMKDLANPDRVLIGGESSPEGLQAVAELVRIYENWVPRNRIITTNTWSSELSKLVANAF 233 (481)
T ss_dssp --CCEEEEE---CCCCCCTTCHHHHHHSCSCEEEEECSSHHHHHHHHHHHHHHHTTSCGGGEEEEEHHHHHHHHHHHHHH
T ss_pred cCCceEEEe---CcccccccchhhcccCCCEEEEEecCchhhHHHHHHHHHHHHhhcCCCeEEecCHHHHHHHHHHHHHH
Confidence 11 1222 33322211 134433222 23688999999999996 677766532 2344442
Q ss_pred ---HHHHHHHHHHHHHcCCCCHHHHHHHHhhc
Q 022407 195 ---LMPMINEAFFTLYTGVATKEDIDAGMKLG 223 (297)
Q Consensus 195 ---~~~~~~Ea~~l~~~g~~~~~~id~a~~~g 223 (297)
..+++||+..+++..+++++++..++..+
T Consensus 234 ~a~~ia~~nE~~~la~~~Gid~~~v~~~~~~~ 265 (481)
T 2o3j_A 234 LAQRISSINSISAVCEATGAEISEVAHAVGYD 265 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHhCcCHHHHHHHHccC
Confidence 35789999999999888999988887654
No 61
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.68 E-value=4.5e-16 Score=143.87 Aligned_cols=193 Identities=18% Similarity=0.209 Sum_probs=132.7
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-cc
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LH 83 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~ 83 (297)
.++|+|||+|.||.+||..|+++|++|++|||++++++.+.+.. .+ ..+..++++++ ++
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~---------~~-----------~gi~~~~s~~e~v~ 74 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAEN---------PG-----------KKLVPYYTVKEFVE 74 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHS---------TT-----------SCEEECSSHHHHHH
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhC---------CC-----------CCeEEeCCHHHHHh
Confidence 36899999999999999999999999999999999887663210 00 12456677766 55
Q ss_pred C---CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccH--HHHhhhcC-CCCeEEEeecCCCCC-CCcceeEe
Q 022407 84 S---ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISI--TRLASATS-RPCQVIGMHFMNPPP-LMKLVEVI 156 (297)
Q Consensus 84 ~---aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~--~~l~~~~~-~~~~~~g~h~~~p~~-~~~~vev~ 156 (297)
+ ||+||.|||....+ +.++.++.+.++++.+|++.+++.+. ..+.+.+. ...++++......|. ......++
T Consensus 75 ~l~~aDvVil~Vp~~~~v-~~vl~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~~i~ 153 (480)
T 2zyd_A 75 SLETPRRILLMVKAGAGT-DAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIM 153 (480)
T ss_dssp TBCSSCEEEECSCSSSHH-HHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCCEEE
T ss_pred CCCCCCEEEEECCCHHHH-HHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCeeCCccccCHhHHhcCCeEE
Confidence 5 99999999986554 45667888888888888766666643 34554442 234555442222111 00011355
Q ss_pred cCCCChHHHHHHHHHHHHHhCCe-------EEEecc-chhh----hHHHHH---HHHHHHHHHHHHc-CCCCHHHHHHHH
Q 022407 157 RGADTSDETFRATKALAERFGKT-------VVCSQD-YAGF----IVNRIL---MPMINEAFFTLYT-GVATKEDIDAGM 220 (297)
Q Consensus 157 ~~~~~~~~~~~~~~~l~~~lG~~-------~v~~~d-~~g~----i~nri~---~~~~~Ea~~l~~~-g~~~~~~id~a~ 220 (297)
.+ ++++.++.++++|+.+|.+ +.++++ ..|. +.|.+. ...++|++.++++ .+++++++..++
T Consensus 154 ~g--g~~~~~~~v~~ll~~~g~~~~dGe~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lGl~~~~~~~l~ 231 (480)
T 2zyd_A 154 PG--GQKEAYELVAPILTKIAAVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLTNEELAQTF 231 (480)
T ss_dssp EE--SCHHHHHHHHHHHHHHSCBCTTSCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_pred ec--CCHHHHHHHHHHHHHHhccccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 55 5789999999999999998 566654 2332 344432 4678999999988 357888887665
No 62
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.67 E-value=1.4e-16 Score=138.10 Aligned_cols=188 Identities=15% Similarity=0.153 Sum_probs=127.8
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|+|||+|.||..+|..|++ |++|++||+++++.+.+.+ .|. ...+ +++ +++
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~-----------~g~-------------~~~~-~~~~~~~ 55 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQE-----------EFG-------------SEAV-PLERVAE 55 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHH-----------HHC-------------CEEC-CGGGGGG
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHH-----------CCC-------------cccC-HHHHHhC
Confidence 579999999999999999999 9999999999988766522 121 1233 444 789
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCc--cHHHHhhhcCC-CCeEEEeecCCC-CCC--CcceeEecC
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSI--SITRLASATSR-PCQVIGMHFMNP-PPL--MKLVEVIRG 158 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~--~~~~l~~~~~~-~~~~~g~h~~~p-~~~--~~~vev~~~ 158 (297)
+|+||+|+|.+..++ .++.++.+.+++++++++.++.. ....+.+.+.. ..+++.. ++.+ +.. .+...++.+
T Consensus 56 ~D~vi~~v~~~~~~~-~v~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~-p~~~~~~~~~~g~~~~~~~ 133 (289)
T 2cvz_A 56 ARVIFTCLPTTREVY-EVAEALYPYLREGTYWVDATSGEPEASRRLAERLREKGVTYLDA-PVSGGTSGAEAGTLTVMLG 133 (289)
T ss_dssp CSEEEECCSSHHHHH-HHHHHHTTTCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEEC-CEESHHHHHHHTCEEEEEE
T ss_pred CCEEEEeCCChHHHH-HHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEe-cCCCChhHHhhCCeEEEEC
Confidence 999999999776554 45677877788888777433322 23456665533 2344443 2211 100 011223333
Q ss_pred CCChHHHHHHHHHHHHHhCCeEEEeccc-hhh----hHHHH---HHHHHHHHHHHHHcCCCCHHHHHHHHhhcc
Q 022407 159 ADTSDETFRATKALAERFGKTVVCSQDY-AGF----IVNRI---LMPMINEAFFTLYTGVATKEDIDAGMKLGT 224 (297)
Q Consensus 159 ~~~~~~~~~~~~~l~~~lG~~~v~~~d~-~g~----i~nri---~~~~~~Ea~~l~~~g~~~~~~id~a~~~g~ 224 (297)
++++.++.+.++| .+|.+++++++. .+. +.|.+ +...++|++.++++.+++++++...+..+.
T Consensus 134 --~~~~~~~~~~~ll-~~g~~~~~~~~~~~~~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~ 204 (289)
T 2cvz_A 134 --GPEEAVERVRPFL-AYAKKVVHVGPVGAGHAVKAINNALLAVNLWAAGEGLLALVKQGVSAEKALEVINASS 204 (289)
T ss_dssp --SCHHHHHHHGGGC-TTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTST
T ss_pred --CCHHHHHHHHHHH-hhcCCeEEcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCHHHHHHHHHccC
Confidence 4788999999999 999988887653 232 23443 246789999999988889999888876554
No 63
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=99.67 E-value=1.9e-15 Score=129.14 Aligned_cols=147 Identities=15% Similarity=0.169 Sum_probs=108.6
Q ss_pred CcEEEEECCChhHHHHHHHHHHCC----CcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcc
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDG----LDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLK 80 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G----~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 80 (297)
.+||+|||+|.||.+||..|+++| ++|++||+++++ .| +...++.+
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~-----------------~g-------------~~~~~~~~ 53 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN-----------------TT-------------LNYMSSNE 53 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS-----------------SS-------------SEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc-----------------Cc-------------eEEeCCHH
Confidence 368999999999999999999999 799999998764 12 24555665
Q ss_pred c-ccCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHHHHhhhcCCCCeEEEeecCCCCCCC-cceeEecC
Q 022407 81 D-LHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPPPLM-KLVEVIRG 158 (297)
Q Consensus 81 ~-~~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~~l~~~~~~~~~~~g~h~~~p~~~~-~~vev~~~ 158 (297)
+ +++||+||+|+|... ..+++.++.+.+ ++.++++.+++++++.+.+.++...+++...+..|.... +...++.+
T Consensus 54 ~~~~~~D~vi~~v~~~~--~~~v~~~l~~~l-~~~~vv~~~~gi~~~~l~~~~~~~~~~v~~~p~~p~~~~~g~~~~~~~ 130 (262)
T 2rcy_A 54 ELARHCDIIVCAVKPDI--AGSVLNNIKPYL-SSKLLISICGGLNIGKLEEMVGSENKIVWVMPNTPCLVGEGSFIYCSN 130 (262)
T ss_dssp HHHHHCSEEEECSCTTT--HHHHHHHSGGGC-TTCEEEECCSSCCHHHHHHHHCTTSEEEEEECCGGGGGTCEEEEEEEC
T ss_pred HHHhcCCEEEEEeCHHH--HHHHHHHHHHhc-CCCEEEEECCCCCHHHHHHHhCCCCcEEEECCChHHHHcCCeEEEEeC
Confidence 5 789999999999543 567778888777 566777889999988777776654344432222232222 23335566
Q ss_pred CCChHHHHHHHHHHHHHhCCeEEEecc
Q 022407 159 ADTSDETFRATKALAERFGKTVVCSQD 185 (297)
Q Consensus 159 ~~~~~~~~~~~~~l~~~lG~~~v~~~d 185 (297)
..++++.++.+.++|+.+|+ ++++++
T Consensus 131 ~~~~~~~~~~~~~ll~~~G~-~~~~~~ 156 (262)
T 2rcy_A 131 KNVNSTDKKYVNDIFNSCGI-IHEIKE 156 (262)
T ss_dssp TTCCHHHHHHHHHHHHTSEE-EEECCG
T ss_pred CCCCHHHHHHHHHHHHhCCC-EEEeCH
Confidence 66789999999999999997 777754
No 64
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.66 E-value=2.7e-15 Score=138.67 Aligned_cols=193 Identities=18% Similarity=0.174 Sum_probs=132.8
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|+|||+|.||..+|..|+++|++|++||+++++++.+.+.. +. ..+..++++++ +++
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~----------~~----------~gi~~~~s~~e~v~~ 65 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEH----------QD----------KNLVFTKTLEEFVGS 65 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHT----------TT----------SCEEECSSHHHHHHT
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhC----------cC----------CCeEEeCCHHHHHhh
Confidence 6899999999999999999999999999999999887663210 00 12456667765 454
Q ss_pred ---CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccH--HHHhhhcCC-CCeEEEeecCCCCCC-CcceeEec
Q 022407 85 ---ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISI--TRLASATSR-PCQVIGMHFMNPPPL-MKLVEVIR 157 (297)
Q Consensus 85 ---aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~--~~l~~~~~~-~~~~~g~h~~~p~~~-~~~vev~~ 157 (297)
+|+||.|+|....++ .++.++.+.++++++|++.+++.+. ..+.+.+.. ..++++.....++.. .....++.
T Consensus 66 l~~aDvVilavp~~~~v~-~vl~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~~i~~ 144 (474)
T 2iz1_A 66 LEKPRRIMLMVQAGAATD-ATIKSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFIGTGVSGGEKGALLGPSMMP 144 (474)
T ss_dssp BCSSCEEEECCCTTHHHH-HHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEEEEEECSHHHHHHHCCCEEE
T ss_pred ccCCCEEEEEccCchHHH-HHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEECCCCCCChhhhccCCeEEe
Confidence 999999999876544 5667888888888887766655543 456665543 334554432222110 00112444
Q ss_pred CCCChHHHHHHHHHHHHHhCCe--------EEEecc-chh----hhHHHHH---HHHHHHHHHHHHc-CCCCHHHHHHHH
Q 022407 158 GADTSDETFRATKALAERFGKT--------VVCSQD-YAG----FIVNRIL---MPMINEAFFTLYT-GVATKEDIDAGM 220 (297)
Q Consensus 158 ~~~~~~~~~~~~~~l~~~lG~~--------~v~~~d-~~g----~i~nri~---~~~~~Ea~~l~~~-g~~~~~~id~a~ 220 (297)
+ ++++.++.+.++|+.+|.+ +.++++ ..| ++.|.+. ...++|++.++++ .+++++++..++
T Consensus 145 g--g~~~~~~~v~~ll~~~g~~~~~dge~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~~Gl~~~~~~~l~ 222 (474)
T 2iz1_A 145 G--GQKEAYDLVAPIFEQIAAKAPQDGKPCVAYMGANGAGHYVKMVHNGIEYGDMQLIAESYDLLKRILGLSNAEIQAIF 222 (474)
T ss_dssp E--ECHHHHHHHHHHHHHHSCBCTTTCCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHH
T ss_pred c--CCHHHHHHHHHHHHHHhcccccCCCceEEEECCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 4 4789999999999999987 456654 233 2444443 4678999999998 467888887766
Q ss_pred h
Q 022407 221 K 221 (297)
Q Consensus 221 ~ 221 (297)
.
T Consensus 223 ~ 223 (474)
T 2iz1_A 223 E 223 (474)
T ss_dssp H
T ss_pred H
Confidence 3
No 65
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=99.65 E-value=4e-16 Score=150.21 Aligned_cols=99 Identities=28% Similarity=0.308 Sum_probs=92.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHcCCC-CHHHHHHHHhhccCCCc---cHHHHHHhhchHHHHHHHHHHHhhcCC-CCCCCcH
Q 022407 188 GFIVNRILMPMINEAFFTLYTGVA-TKEDIDAGMKLGTNQPM---GPLQLADFIGLDVCLSIMKVLHTGLGD-SKYAPCP 262 (297)
Q Consensus 188 g~i~nri~~~~~~Ea~~l~~~g~~-~~~~id~a~~~g~g~~~---Gp~~~~D~~Gl~~~~~~~~~~~~~~~~-~~~~~~~ 262 (297)
..+..|++.+++||+++++++|++ ++.|||.++.+|+|||. |||+|+|.+|++.++..++.+.+.+++ ++|+|++
T Consensus 636 ~ei~~R~l~~~~nEa~~~l~egI~~~~~diD~a~~~G~Gfp~~~GGp~~~~D~~G~~~~v~~l~~l~~~~g~~~~~~P~~ 715 (742)
T 3zwc_A 636 EEILERCLYSLINEAFRILEEGMAARPEHIDVIYLHGYGWPRHKGGPMFYAASVGLPTVLEKLQKYYRQNPDIPQLEPSD 715 (742)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHSCCCGGGCCHHHHHHHHCHHHHHHHHHHHHHHCTTCGGGSCCH
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcCCCHHHHHHHHHhCcCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCCCH
Confidence 469999999999999999999998 59999999999999998 999999999999999999999999998 6899999
Q ss_pred HHHHHHHcCCCCcccCCcccccCC
Q 022407 263 LLVQYVDAGRLGKKRGIGVFDYRR 286 (297)
Q Consensus 263 ~l~~~~~~g~~G~~~g~Gfy~y~~ 286 (297)
+|++|+++|....+.++|||.+.+
T Consensus 716 ~L~~ma~~G~~~f~~~~~~~~~~~ 739 (742)
T 3zwc_A 716 YLRRLVAQGSPPLKEWQSLAGPHG 739 (742)
T ss_dssp HHHHHHHTTCCCGGGHHHHHSTTC
T ss_pred HHHHHHHcCCCcccccccccCCCC
Confidence 999999999988888888887754
No 66
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.65 E-value=4.6e-15 Score=126.98 Aligned_cols=178 Identities=13% Similarity=0.168 Sum_probs=117.4
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeC--CHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-c
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDT--DPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-L 82 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~ 82 (297)
|||+|||+|.||..||..|+++|++|++||+ +++.++.+ .+.|. + ++.++ +
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~-----------~~~g~-------------~--~~~~~~~ 54 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERA-----------RTVGV-------------T--ETSEEDV 54 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHH-----------HHHTC-------------E--ECCHHHH
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEEEeCCccCHHHHHHH-----------HHCCC-------------c--CCHHHHH
Confidence 4899999999999999999999999999998 66665543 22232 2 44545 7
Q ss_pred cCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccH---HHHhhhcCCCCeEEEeecCCCCCC--CcceeEec
Q 022407 83 HSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISI---TRLASATSRPCQVIGMHFMNPPPL--MKLVEVIR 157 (297)
Q Consensus 83 ~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~---~~l~~~~~~~~~~~g~h~~~p~~~--~~~vev~~ 157 (297)
++||+||+|+|.+...+. + .++.+.+++ ++++. ++..+ +.+.+.+.... ++..+.+.+|.. .+...++.
T Consensus 55 ~~aDvvi~~v~~~~~~~~-~-~~~~~~~~~--~vi~~-s~~~~~~~~~l~~~~~~~g-~~~~~v~~~~~~~~~g~~~~~~ 128 (264)
T 1i36_A 55 YSCPVVISAVTPGVALGA-A-RRAGRHVRG--IYVDI-NNISPETVRMASSLIEKGG-FVDAAIMGSVRRKGADIRIIAS 128 (264)
T ss_dssp HTSSEEEECSCGGGHHHH-H-HHHHTTCCS--EEEEC-SCCCHHHHHHHHHHCSSSE-EEEEEECSCHHHHGGGCEEEEE
T ss_pred hcCCEEEEECCCHHHHHH-H-HHHHHhcCc--EEEEc-cCCCHHHHHHHHHHHhhCC-eeeeeeeCCccccccCCeEEec
Confidence 899999999998765443 3 566666666 44432 34432 46777665443 666666655421 12232333
Q ss_pred CCCChHHHHHHHHHHHHHhCCeEEEeccchhh-----hHHHHH----HHHHHHHHHHHHcCCCCHHHHHHHHhh
Q 022407 158 GADTSDETFRATKALAERFGKTVVCSQDYAGF-----IVNRIL----MPMINEAFFTLYTGVATKEDIDAGMKL 222 (297)
Q Consensus 158 ~~~~~~~~~~~~~~l~~~lG~~~v~~~d~~g~-----i~nri~----~~~~~Ea~~l~~~g~~~~~~id~a~~~ 222 (297)
+. ++ +.+++ |+.+|+.++++++.+|. ++++.+ ...++|++.+.++.+++++.+ ..+..
T Consensus 129 g~---~~--~~~~~-l~~~g~~~~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~la~~~G~~~~~~-~~~~~ 195 (264)
T 1i36_A 129 GR---DA--EEFMK-LNRYGLNIEVRGREPGDASAIKMLRSSYTKGVSALLWETLTAAHRLGLEEDVL-EMLEY 195 (264)
T ss_dssp ST---TH--HHHHG-GGGGTCEEEECSSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH-HHHHT
T ss_pred CC---cH--HHhhh-HHHcCCeeEECCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHH-HHHHH
Confidence 32 22 77788 99999998888753342 444443 467899999988877777644 44443
No 67
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=99.65 E-value=4.6e-16 Score=129.70 Aligned_cols=152 Identities=18% Similarity=0.261 Sum_probs=109.0
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCCcEEE-EeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccccc
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGLDVWL-VDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLH 83 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~~V~~-~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 83 (297)
++||+|||+|.||..+|..|+++|++|++ +|+++++++.+.+. .|. ....++.+.++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~----------~g~------------~~~~~~~~~~~ 80 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDR----------FGA------------SVKAVELKDAL 80 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHH----------HTT------------TEEECCHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHH----------hCC------------CcccChHHHHh
Confidence 47999999999999999999999999999 99999887765221 121 02334445588
Q ss_pred CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCc--------------cHHHHhhhcCCCCeEEEeecCCCCCC
Q 022407 84 SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSI--------------SITRLASATSRPCQVIGMHFMNPPPL 149 (297)
Q Consensus 84 ~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~--------------~~~~l~~~~~~~~~~~g~h~~~p~~~ 149 (297)
++|+||.|+|... ..+++.++.+ . +++++++.+.++ ..+.+++.++ ..+++...++.|+..
T Consensus 81 ~aDvVilavp~~~--~~~v~~~l~~-~-~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~-~~~vv~~~~~~~~~v 155 (220)
T 4huj_A 81 QADVVILAVPYDS--IADIVTQVSD-W-GGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVP-GAKVVKAFNTLPAAV 155 (220)
T ss_dssp TSSEEEEESCGGG--HHHHHTTCSC-C-TTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHST-TCEEEEESCSSCHHH
T ss_pred cCCEEEEeCChHH--HHHHHHHhhc-c-CCCEEEEcCCCCCcccccccccCCCcHHHHHHHHCC-CCCEEECCCCCCHHH
Confidence 9999999998543 5667777665 4 467888788777 3467777775 356665544333211
Q ss_pred C---------cceeEecCCCChHHHHHHHHHHHHHhCCeEEEecc
Q 022407 150 M---------KLVEVIRGADTSDETFRATKALAERFGKTVVCSQD 185 (297)
Q Consensus 150 ~---------~~vev~~~~~~~~~~~~~~~~l~~~lG~~~v~~~d 185 (297)
. +...++.+ .+++..+.+.++++.+|++++.+++
T Consensus 156 ~~~g~~~~~~~~~v~~~g--~~~~~~~~v~~l~~~~G~~~~~~G~ 198 (220)
T 4huj_A 156 LAADPDKGTGSRVLFLSG--NHSDANRQVAELISSLGFAPVDLGT 198 (220)
T ss_dssp HTSCSBCSSCEEEEEEEE--SCHHHHHHHHHHHHHTTCEEEECCS
T ss_pred hhhCcccCCCCeeEEEeC--CCHHHHHHHHHHHHHhCCCeEeeCC
Confidence 1 12233333 5799999999999999999999876
No 68
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.64 E-value=1.5e-15 Score=140.71 Aligned_cols=194 Identities=14% Similarity=0.150 Sum_probs=132.1
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-c--
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-L-- 82 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~-- 82 (297)
++|+|||+|.||..+|..|+++|++|++||+++++++.+.+. .. . -..+..++++++ +
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~----------~~--~-------g~gi~~~~~~~e~v~~ 63 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLAN----------EA--K-------GTKVLGAHSLEEMVSK 63 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHT----------TT--T-------TSSCEECSSHHHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhc----------cc--c-------CCCeEEeCCHHHHHhh
Confidence 579999999999999999999999999999999988766220 00 0 012456677766 3
Q ss_pred -cCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccH--HHHhhhcC-CCCeEEEeecCCCCCC-CcceeEec
Q 022407 83 -HSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISI--TRLASATS-RPCQVIGMHFMNPPPL-MKLVEVIR 157 (297)
Q Consensus 83 -~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~--~~l~~~~~-~~~~~~g~h~~~p~~~-~~~vev~~ 157 (297)
+++|+||.|+|....++ .++.++.+.++++++|++.+++.+. ..+.+.+. ....+++.....++.. .....++.
T Consensus 64 l~~aDvVilaVp~~~~v~-~vl~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~pv~g~~~~a~~g~~i~~ 142 (482)
T 2pgd_A 64 LKKPRRIILLVKAGQAVD-NFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSGVSGGEDGARYGPSLMP 142 (482)
T ss_dssp BCSSCEEEECSCTTHHHH-HHHHHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCCEEEE
T ss_pred ccCCCEEEEeCCChHHHH-HHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeCCCCCCChhhhccCCeEEe
Confidence 48999999999876544 4667888888888887766655543 34544442 2345555432222210 00012444
Q ss_pred CCCChHHHHHHHHHHHHHhCCeE-------EEecc-chh----hhHHHHH---HHHHHHHHHHHHcC-CCCHHHHHHHHh
Q 022407 158 GADTSDETFRATKALAERFGKTV-------VCSQD-YAG----FIVNRIL---MPMINEAFFTLYTG-VATKEDIDAGMK 221 (297)
Q Consensus 158 ~~~~~~~~~~~~~~l~~~lG~~~-------v~~~d-~~g----~i~nri~---~~~~~Ea~~l~~~g-~~~~~~id~a~~ 221 (297)
+ ++++.++.+.++|+.+|.++ +++++ ..| ++.|.+. ..+++|++.++++. +++++++..++.
T Consensus 143 g--g~~e~~~~v~~ll~~~g~~v~d~~~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~~G~~~~~~~~~~~ 220 (482)
T 2pgd_A 143 G--GNKEAWPHIKAIFQGIAAKVGTGEPCCDWVGDDGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGLGHKEMAKAFE 220 (482)
T ss_dssp E--ECTTTHHHHHHHHHHHSCBCTTSCBSCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred C--CCHHHHHHHHHHHHHhhhhccCCCcceEEECCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHH
Confidence 4 36788999999999999886 44432 233 3445443 46789999999987 889988887764
No 69
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.64 E-value=3.2e-15 Score=138.21 Aligned_cols=197 Identities=16% Similarity=0.140 Sum_probs=133.8
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-cc-
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LH- 83 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~- 83 (297)
|+|+|||+|.||..+|..|+++|++|++||+++++++.+.+. .|.. +. ..++..++++++ ++
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~----------~g~~-~~-----~~~i~~~~~~~e~v~~ 65 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKA----------NASA-PF-----AGNLKAFETMEAFAAS 65 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH----------TTTS-TT-----GGGEEECSCHHHHHHH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----------cCCC-CC-----CCCeEEECCHHHHHhc
Confidence 479999999999999999999999999999999988766321 1211 00 023556777766 44
Q ss_pred --CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccH--HHHhhhcC-CCCeEEEeecCCCCCC-CcceeEec
Q 022407 84 --SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISI--TRLASATS-RPCQVIGMHFMNPPPL-MKLVEVIR 157 (297)
Q Consensus 84 --~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~--~~l~~~~~-~~~~~~g~h~~~p~~~-~~~vev~~ 157 (297)
++|+||.|+|....++ .++.++.+.++++++|++.+++.+. ..+.+.+. ....+++.....++.. .....++.
T Consensus 66 l~~aDvVilaVp~~~~v~-~vl~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~~i~~ 144 (478)
T 1pgj_A 66 LKKPRKALILVQAGAATD-STIEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMGISGGEEGARKGPAFFP 144 (478)
T ss_dssp BCSSCEEEECCCCSHHHH-HHHHHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEEEESHHHHHHHCCEEEE
T ss_pred ccCCCEEEEecCChHHHH-HHHHHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEEeeccCCHHHHhcCCeEec
Confidence 5999999999876544 5667888888888887766655543 45555443 2345555433222210 00112444
Q ss_pred CCCChHHHHHHHHHHHHHhCCe-------EEEecc-chhh----hHHHHH---HHHHHHHHHHHHcCCCCHHHHHHHHh
Q 022407 158 GADTSDETFRATKALAERFGKT-------VVCSQD-YAGF----IVNRIL---MPMINEAFFTLYTGVATKEDIDAGMK 221 (297)
Q Consensus 158 ~~~~~~~~~~~~~~l~~~lG~~-------~v~~~d-~~g~----i~nri~---~~~~~Ea~~l~~~g~~~~~~id~a~~ 221 (297)
+ ++++.++.++++++.+|.+ ++++++ ..|. +.|.+. ..+++|++.+++..+++++++..++.
T Consensus 145 g--g~~~~~~~v~~ll~~~g~~~~dg~~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~G~~~~~~~~l~~ 221 (478)
T 1pgj_A 145 G--GTLSVWEEIRPIVEAAAAKADDGRPCVTMNGSGGAGSCVKMYHNSGEYAILQIWGEVFDILRAMGLNNDEVAAVLE 221 (478)
T ss_dssp E--ECHHHHHHHHHHHHHHSCBCTTSCBSCCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred c--CCHHHHHHHHHHHHHhcccccCCCeeEEEeCCchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 4 4688999999999999987 556654 2332 344433 35789999999988889988888775
No 70
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.63 E-value=9.6e-17 Score=146.33 Aligned_cols=93 Identities=22% Similarity=0.270 Sum_probs=77.7
Q ss_pred hhhhHHHHHHHHHHHHHHHHHcCCCC-HHHHHHHHhhccCCCc---cHHHHHHhhchHHHHHHHHHHHhhcCCCC-CCCc
Q 022407 187 AGFIVNRILMPMINEAFFTLYTGVAT-KEDIDAGMKLGTNQPM---GPLQLADFIGLDVCLSIMKVLHTGLGDSK-YAPC 261 (297)
Q Consensus 187 ~g~i~nri~~~~~~Ea~~l~~~g~~~-~~~id~a~~~g~g~~~---Gp~~~~D~~Gl~~~~~~~~~~~~~~~~~~-~~~~ 261 (297)
...+.+|++.+++||+++++++|+++ +.|||.++.+|+|||. |||+|+|.+|++.++..++.|.+.+++.+ |+|+
T Consensus 355 ~~~i~~r~l~~~~nea~~~l~egi~~~~~diD~~~~~G~GfP~~~GGp~~~~d~~G~~~~~~~l~~l~~~~g~~~~~~p~ 434 (460)
T 3k6j_A 355 DQDVINFMLYPTVNEGYRCIEEGVISNESLIDIMFILGFGWPIHSGGPMRFGKTEGLDKIANMLVHWSSLEPKESAYIVA 434 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHTCCCSEETTEECBCSSCBSSHHHHHHHHHHHHHCTTCGGGSCC
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCcchhhhHHHHhcCCCCccccCHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 35699999999999999999999995 9999999999999998 99999999999999999999999999954 9999
Q ss_pred HHHHHHHHcCCCCcccCC
Q 022407 262 PLLVQYVDAGRLGKKRGI 279 (297)
Q Consensus 262 ~~l~~~~~~g~~G~~~g~ 279 (297)
++|++|+++|++|+|+|.
T Consensus 435 ~~L~~~a~~g~~~~~~~~ 452 (460)
T 3k6j_A 435 DALKTANVSTGSSGSSGG 452 (460)
T ss_dssp HHHHHHC-----------
T ss_pred HHHHHHHHcCCCccccCC
Confidence 999999999999999994
No 71
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=99.61 E-value=4.2e-14 Score=128.13 Aligned_cols=202 Identities=16% Similarity=0.167 Sum_probs=126.0
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCC-CChhh----hcccCCceEEecCcc
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQ-LSQAM----GTDAPRRLRCTSNLK 80 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~----~~~~~~~i~~~~~~~ 80 (297)
|||+|||+|.||.++|..|++ |++|++||+++++++.+.+ .+. +.... ......++.++++++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~-----------~~~~i~e~~l~~~~~~~~~~l~~t~~~~ 68 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINN-----------GLSPIQDEYIEYYLKSKQLSIKATLDSK 68 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHT-----------TCCSSCCHHHHHHHHHSCCCEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHc-----------CCCCcCCCCHHHHHHhccCcEEEeCCHH
Confidence 489999999999999999999 9999999999998877522 221 00000 000123466777775
Q ss_pred c-ccCCcEEEEecccCHH---------HHHHHHHHHHhhccCCeEEee-cCCCccH-HHHhhhcCCCCeEEEe-ecCCCC
Q 022407 81 D-LHSADIIVEAIVESED---------VKKKLFSELDKITKASAILAS-NTSSISI-TRLASATSRPCQVIGM-HFMNPP 147 (297)
Q Consensus 81 ~-~~~aD~Vi~~v~e~~~---------~k~~~~~~l~~~~~~~~ii~s-~ts~~~~-~~l~~~~~~~~~~~g~-h~~~p~ 147 (297)
+ +++||+||.|+|.... ....+++.+.+ ++++++|+. +|.++.. +.+.+.++.. .++.. .+..|.
T Consensus 69 ~~~~~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~~-~v~~~Pe~~~~G 146 (402)
T 1dlj_A 69 AAYKEAELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKSTIPIGFITEMRQKFQTD-RIIFSPEFLRES 146 (402)
T ss_dssp HHHHHCSEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTCS-CEEECCCCCCTT
T ss_pred HHhcCCCEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCCC-eEEECCccccCc
Confidence 4 8899999999998631 35567777877 777777664 5655554 4566655432 22211 111111
Q ss_pred CCC-cce---eEecCCCC-----hHHHHHHHHHHHHHhCC--e-EEEeccch-h----hhHHHHH---HHHHHHHHHHHH
Q 022407 148 PLM-KLV---EVIRGADT-----SDETFRATKALAERFGK--T-VVCSQDYA-G----FIVNRIL---MPMINEAFFTLY 207 (297)
Q Consensus 148 ~~~-~~v---ev~~~~~~-----~~~~~~~~~~l~~~lG~--~-~v~~~d~~-g----~i~nri~---~~~~~Ea~~l~~ 207 (297)
... ... .++.|... ..+..+.+.+++..-+. . ++++.+.. + ++.|-++ .+++||+..+++
T Consensus 147 ~a~~~~~~~~riviG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~nE~~~l~~ 226 (402)
T 1dlj_A 147 KALYDNLYPSRIIVSCEENDSPKVKADAEKFALLLKSAAKKNNVPVLIMGASEAEAVKLFANTYLALRVAYFNELDTYAE 226 (402)
T ss_dssp STTHHHHSCSCEEEECCTTSCHHHHHHHHHHHHHHHHHCSCSCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhcccCCCEEEEeCCCcccchhHHHHHHHHHHHhhhhccCCceEEecChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 011 14444322 12556777777875332 2 56666532 1 2334332 467999999999
Q ss_pred cCCCCHHHHHHHHh
Q 022407 208 TGVATKEDIDAGMK 221 (297)
Q Consensus 208 ~g~~~~~~id~a~~ 221 (297)
..+++++++..++.
T Consensus 227 ~~Gid~~~v~~~~~ 240 (402)
T 1dlj_A 227 SRKLNSHMIIQGIS 240 (402)
T ss_dssp HTTCCHHHHHHHHH
T ss_pred HhCCCHHHHHHHhc
Confidence 98899999888774
No 72
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=99.61 E-value=4.2e-14 Score=128.16 Aligned_cols=202 Identities=12% Similarity=0.102 Sum_probs=129.4
Q ss_pred CCcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHH--------HHHHHHHHHHcCCCChhhhcccCCceEE
Q 022407 4 KMKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKS--------ISSSIQKFVSKGQLSQAMGTDAPRRLRC 75 (297)
Q Consensus 4 ~~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 75 (297)
.+.+|+|||+|.||.++|..|++.||+|+.+|+++++++.+.+. +...+.+.++. +++++
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~------------g~l~~ 87 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSS------------GRLSF 87 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHT------------TCEEE
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHc------------CCeeE
Confidence 35699999999999999999999999999999999999886432 12222222333 45788
Q ss_pred ecCccc-ccCCcEEEEecccC--------HHHHHHHHHHHHhhcc----CCeEEeecCCCccH-HHHh-hhc---CCCCe
Q 022407 76 TSNLKD-LHSADIIVEAIVES--------EDVKKKLFSELDKITK----ASAILASNTSSISI-TRLA-SAT---SRPCQ 137 (297)
Q Consensus 76 ~~~~~~-~~~aD~Vi~~v~e~--------~~~k~~~~~~l~~~~~----~~~ii~s~ts~~~~-~~l~-~~~---~~~~~ 137 (297)
+++.++ +++||++|.|||++ ........+.+.+.++ ...||..+|..+.. +++. ..+ .....
T Consensus 88 tt~~~~ai~~ad~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~l~~~~~~~~ 167 (444)
T 3vtf_A 88 AESAEEAVAATDATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARAVAEEAGGVK 167 (444)
T ss_dssp CSSHHHHHHTSSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHHHHTTTTTCC
T ss_pred EcCHHHHHhcCCceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHHHHHhCCCCC
Confidence 888876 89999999999863 2234455556666553 34455555544433 2221 111 11112
Q ss_pred E-EEeecCCCCCCCcc---------eeEecCCCChHHHHHHHHHHHHHhCCeEEEeccchh---hhHHHHH----HHHHH
Q 022407 138 V-IGMHFMNPPPLMKL---------VEVIRGADTSDETFRATKALAERFGKTVVCSQDYAG---FIVNRIL----MPMIN 200 (297)
Q Consensus 138 ~-~g~h~~~p~~~~~~---------vev~~~~~~~~~~~~~~~~l~~~lG~~~v~~~d~~g---~i~nri~----~~~~~ 200 (297)
| ++ ++|..+.+. -.++.| .+++.+.+.+..+++.+....+++.-... .++++.+ .+++|
T Consensus 168 f~v~---~~PErl~eG~a~~d~~~~~riViG-~~~~~a~~~~~~ly~~~~~~~~~~~~~~AE~~Kl~eN~~ravnIa~~N 243 (444)
T 3vtf_A 168 FSVA---SNPEFLREGSALEDFFKPDRIVIG-AGDERAASFLLDVYKAVDAPKLVMKPREAELVKYASNVFLALKISFAN 243 (444)
T ss_dssp CEEE---ECCCCCCTTSHHHHHHSCSCEEEE-ESSHHHHHHHHHHTTTSCSCEEEECHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceee---cCcccccCCccccccccCCcEEEc-CCCHHHHHHHHHHHhccCCCEEEechhHHHHHHHHHHHHHHHHHHHHH
Confidence 1 22 244433321 123433 25677888899999888766555432222 2333333 47899
Q ss_pred HHHHHHHcCCCCHHHHHHHHh
Q 022407 201 EAFFTLYTGVATKEDIDAGMK 221 (297)
Q Consensus 201 Ea~~l~~~g~~~~~~id~a~~ 221 (297)
|...++++-+++..++-.++.
T Consensus 244 Ela~ice~~GiDv~eV~~a~~ 264 (444)
T 3vtf_A 244 EVGLLAKRLGVDTYRVFEAVG 264 (444)
T ss_dssp HHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHhc
Confidence 999999998899888777764
No 73
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.60 E-value=2e-14 Score=127.34 Aligned_cols=149 Identities=19% Similarity=0.192 Sum_probs=106.6
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHH-HHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-cc
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDA-LVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LH 83 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~ 83 (297)
++|+|||+|.||.++|..|..+|++|+++|+++++ .+.+ .+.|. ... +.++ ++
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a-----------~~~G~-------------~~~-~~~e~~~ 71 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKA-----------EAHGL-------------KVA-DVKTAVA 71 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHH-----------HHTTC-------------EEE-CHHHHHH
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHH-----------HHCCC-------------EEc-cHHHHHh
Confidence 68999999999999999999999999999998765 3322 22332 233 5544 78
Q ss_pred CCcEEEEecccCHHHHHHHHH-HHHhhccCCeEEeecCCCccHHHHhhhc-CCCCeEEEeecCCCCCC---------Ccc
Q 022407 84 SADIIVEAIVESEDVKKKLFS-ELDKITKASAILASNTSSISITRLASAT-SRPCQVIGMHFMNPPPL---------MKL 152 (297)
Q Consensus 84 ~aD~Vi~~v~e~~~~k~~~~~-~l~~~~~~~~ii~s~ts~~~~~~l~~~~-~~~~~~~g~h~~~p~~~---------~~~ 152 (297)
+||+||.|+|.... ..++. ++.+.++++++|++. +++.. .+.... +....+++.||..|... ...
T Consensus 72 ~aDvVilavp~~~~--~~v~~~~i~~~l~~~~ivi~~-~gv~~-~~~~~~~~~~~~vv~~~P~gp~~a~~~l~~~G~g~~ 147 (338)
T 1np3_A 72 AADVVMILTPDEFQ--GRLYKEEIEPNLKKGATLAFA-HGFSI-HYNQVVPRADLDVIMIAPKAPGHTVRSEFVKGGGIP 147 (338)
T ss_dssp TCSEEEECSCHHHH--HHHHHHHTGGGCCTTCEEEES-CCHHH-HTTSSCCCTTCEEEEEEESSCSHHHHHHHHTTCCCC
T ss_pred cCCEEEEeCCcHHH--HHHHHHHHHhhCCCCCEEEEc-CCchh-HHHhhcCCCCcEEEeccCCCCchhHHHHHhccCCCe
Confidence 99999999997653 67777 888888888888865 45554 333322 22346899999766531 111
Q ss_pred eeEecCCCChHHHHHHHHHHHHHhCC-e--EEEe
Q 022407 153 VEVIRGADTSDETFRATKALAERFGK-T--VVCS 183 (297)
Q Consensus 153 vev~~~~~~~~~~~~~~~~l~~~lG~-~--~v~~ 183 (297)
+-++++..++++..+.+..+++.+|. . ++.+
T Consensus 148 ~ii~~~~~~~~~a~~~~~~l~~~lG~~~agv~~~ 181 (338)
T 1np3_A 148 DLIAIYQDASGNAKNVALSYACGVGGGRTGIIET 181 (338)
T ss_dssp EEEEEEECSSSCHHHHHHHHHHHTTHHHHCEEEC
T ss_pred EEEEecCCCCHHHHHHHHHHHHHcCCCccceEee
Confidence 22455555778889999999999998 4 5555
No 74
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=99.58 E-value=4e-14 Score=117.05 Aligned_cols=157 Identities=15% Similarity=0.177 Sum_probs=110.5
Q ss_pred cEEEEEC-CChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-cc
Q 022407 6 KVMGVVG-SGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LH 83 (297)
Q Consensus 6 ~~V~iiG-~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~ 83 (297)
+||+||| +|.||..++..|+++|++|+++|+++++.+.+.+.... .... ..+.. +++++ ++
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~------------~~~~~-~~~~~~~~ 63 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRR----IAGD------------ASITG-MKNEDAAE 63 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHH----HHSS------------CCEEE-EEHHHHHH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc----cccc------------CCCCh-hhHHHHHh
Confidence 4899999 99999999999999999999999999887665432211 1110 11332 34444 78
Q ss_pred CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCcc--------------HHHHhhhcCCCCeEEEeecCCCCCC
Q 022407 84 SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSIS--------------ITRLASATSRPCQVIGMHFMNPPPL 149 (297)
Q Consensus 84 ~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~--------------~~~l~~~~~~~~~~~g~h~~~p~~~ 149 (297)
++|+||.|+|.+. ...++.++.+.++ ++++++.+++++ .+++++.++. .+++..++..+...
T Consensus 64 ~~D~Vi~~~~~~~--~~~~~~~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~~-~~~v~~~~~~~~~~ 139 (212)
T 1jay_A 64 ACDIAVLTIPWEH--AIDTARDLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLES-EKVVSALHTIPAAR 139 (212)
T ss_dssp HCSEEEECSCHHH--HHHHHHHTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTC-SCEEECCTTCCHHH
T ss_pred cCCEEEEeCChhh--HHHHHHHHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCCC-CeEEEEccchHHHH
Confidence 8999999998544 4467777776664 788888888776 5777777753 56776543222111
Q ss_pred -------CcceeEecCCCChHHHHHHHHHHHHHh-CCeEEEecc
Q 022407 150 -------MKLVEVIRGADTSDETFRATKALAERF-GKTVVCSQD 185 (297)
Q Consensus 150 -------~~~vev~~~~~~~~~~~~~~~~l~~~l-G~~~v~~~d 185 (297)
..+..++.+. +++.++.+.++++.+ |+.++++++
T Consensus 140 ~~~~~~~~~~~~~~~g~--~~~~~~~v~~l~~~~~G~~~~~~~~ 181 (212)
T 1jay_A 140 FANLDEKFDWDVPVCGD--DDESKKVVMSLISEIDGLRPLDAGP 181 (212)
T ss_dssp HHCTTCCCCEEEEEEES--CHHHHHHHHHHHHHSTTEEEEEEES
T ss_pred hhCcCCCCCccEEEECC--cHHHHHHHHHHHHHcCCCCceeccc
Confidence 1133455553 588999999999999 999988876
No 75
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=99.57 E-value=2.2e-14 Score=125.89 Aligned_cols=171 Identities=13% Similarity=0.138 Sum_probs=109.4
Q ss_pred CCCCCcEEEEECCChhHHHHHHHHHHC-----C-CcEEEEeCCHHHHHHHHHHHHHHHHHHHH-cCCCChh-hhcccCCc
Q 022407 1 MEEKMKVMGVVGSGQMGSGIAQLGVMD-----G-LDVWLVDTDPDALVRATKSISSSIQKFVS-KGQLSQA-MGTDAPRR 72 (297)
Q Consensus 1 M~~~~~~V~iiG~G~mG~~iA~~l~~~-----G-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~-~~~~~~~~ 72 (297)
|....+||+|||+|.||..+|..|+++ | ++|++||+ +++++.+ .+ .|..... .......+
T Consensus 4 m~~~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l-----------~~~~g~~~~~~~~~~~~~~ 71 (317)
T 2qyt_A 4 MNQQPIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAI-----------RAAGGLRVVTPSRDFLARP 71 (317)
T ss_dssp ---CCEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHH-----------HHHTSEEEECSSCEEEECC
T ss_pred CCCCCCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHH-----------HhcCCeEEEeCCCCeEEec
Confidence 555567999999999999999999999 9 99999999 7666654 22 3321000 00001112
Q ss_pred eEEecCcccccCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccH-HHHhhhcCCCCeEEEeecCCCCCC--
Q 022407 73 LRCTSNLKDLHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISI-TRLASATSRPCQVIGMHFMNPPPL-- 149 (297)
Q Consensus 73 i~~~~~~~~~~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~-~~l~~~~~~~~~~~g~h~~~p~~~-- 149 (297)
+..+++.+.++++|+||.|++... ...++.++.+.++++++|++.+.++.. +.+.+.++...-+.++.++..+..
T Consensus 72 ~~~~~~~~~~~~~D~vil~vk~~~--~~~v~~~i~~~l~~~~~iv~~~nG~~~~~~l~~~l~~~~v~~g~~~~~a~~~~p 149 (317)
T 2qyt_A 72 TCVTDNPAEVGTVDYILFCTKDYD--MERGVAEIRPMIGQNTKILPLLNGADIAERMRTYLPDTVVWKGCVYISARKSAP 149 (317)
T ss_dssp SEEESCHHHHCCEEEEEECCSSSC--HHHHHHHHGGGEEEEEEEEECSCSSSHHHHHTTTSCTTTBCEEEEEEEEEEEET
T ss_pred ceEecCccccCCCCEEEEecCccc--HHHHHHHHHhhcCCCCEEEEccCCCCcHHHHHHHCCCCcEEEEEEEEEEEEcCC
Confidence 344455555789999999998766 367778888888888888877888877 566666654322233333222211
Q ss_pred ------Cc-ceeEecC--CCChHHHHHHHHHHHHHhCCeEEEeccc
Q 022407 150 ------MK-LVEVIRG--ADTSDETFRATKALAERFGKTVVCSQDY 186 (297)
Q Consensus 150 ------~~-~vev~~~--~~~~~~~~~~~~~l~~~lG~~~v~~~d~ 186 (297)
.. ...++.. ...+++.+ .+.++|+..|..+++.+|.
T Consensus 150 g~~~~~~~g~~~~ig~~~~~~~~~~~-~~~~ll~~~g~~~~~~~di 194 (317)
T 2qyt_A 150 GLITLEADRELFYFGSGLPEQTDDEV-RLAELLTAAGIRAYNPTDI 194 (317)
T ss_dssp TEEEEEEEEEEEEEECCSSSCCHHHH-HHHHHHHHTTCCEECCSCH
T ss_pred CEEEEcCCCceEEEcCCCCCCcCHHH-HHHHHHHHCCCCCEEchHH
Confidence 01 1111322 23456667 8899999999988877764
No 76
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.57 E-value=3.6e-14 Score=120.15 Aligned_cols=163 Identities=17% Similarity=0.286 Sum_probs=100.7
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHH-HH-HHHHHHHHH-HHHHHHcCCCChhhhcccCCceEEecCccc
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDA-LV-RATKSISSS-IQKFVSKGQLSQAMGTDAPRRLRCTSNLKD 81 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~-~~-~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 81 (297)
.+||+|||+|.||.+||..|+++|++|++||+++++ +. .......+. +..+.+. ...... ++.++
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-~~~~e 86 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPE-----------HPHVHL-AAFAD 86 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGG-----------STTCEE-EEHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhh-----------cCceec-cCHHH
Confidence 479999999999999999999999999999999886 11 100000000 0111111 111233 34444
Q ss_pred -ccCCcEEEEecccCHHHHHHHHHHH-HhhccCCeEEeecCCCc----------------cH-HHHhhhcCCCCeEE-Ee
Q 022407 82 -LHSADIIVEAIVESEDVKKKLFSEL-DKITKASAILASNTSSI----------------SI-TRLASATSRPCQVI-GM 141 (297)
Q Consensus 82 -~~~aD~Vi~~v~e~~~~k~~~~~~l-~~~~~~~~ii~s~ts~~----------------~~-~~l~~~~~~~~~~~-g~ 141 (297)
+++||+||.|+|.+... .++.++ .+.+ ++++|++.+.++ .. +.+++.++. .+++ ++
T Consensus 87 ~~~~aDvVilavp~~~~~--~~~~~i~~~~l-~g~ivi~~s~~~~~~~G~~~t~~~~~~~~~~~~l~~~l~~-~~vv~~~ 162 (245)
T 3dtt_A 87 VAAGAELVVNATEGASSI--AALTAAGAENL-AGKILVDIANPLDFSHGMPPTLNPVNTDSLGEQIQRTFPE-AKVVKTL 162 (245)
T ss_dssp HHHHCSEEEECSCGGGHH--HHHHHHCHHHH-TTSEEEECCCCEECTTCSSCEESSCSSCCHHHHHHHHSTT-SEEEECS
T ss_pred HHhcCCEEEEccCcHHHH--HHHHHhhhhhc-CCCEEEECCCCCCCcCCccccccCCCCccHHHHHHHHCCC-CeEEEee
Confidence 78999999999976643 455566 5555 566666555322 22 456666653 4554 45
Q ss_pred ecCCCCCCC--------cceeEecCCCChHHHHHHHHHHHHHhCCe-EEEecc
Q 022407 142 HFMNPPPLM--------KLVEVIRGADTSDETFRATKALAERFGKT-VVCSQD 185 (297)
Q Consensus 142 h~~~p~~~~--------~~vev~~~~~~~~~~~~~~~~l~~~lG~~-~v~~~d 185 (297)
++.+.|... ++.-++.+ .+++.++.++++|+.+|+. ++++++
T Consensus 163 ~~~~a~v~~~~~~a~~g~~~~~v~g--~d~~~~~~v~~ll~~~g~~~~~~~G~ 213 (245)
T 3dtt_A 163 NTMNASLMVDPGRAAGGDHSVFVSG--NDAAAKAEVATLLKSLGHQDVIDLGD 213 (245)
T ss_dssp TTSCHHHHHCGGGTGGGCCCEEEEC--SCHHHHHHHHHHHHHTTCCCEEEEES
T ss_pred cccCHHHhcCccccCCCCeeEEEEC--CCHHHHHHHHHHHHHcCCCceeccCc
Confidence 554433111 12223334 4789999999999999975 477766
No 77
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=99.57 E-value=2.5e-14 Score=128.18 Aligned_cols=192 Identities=15% Similarity=0.123 Sum_probs=121.2
Q ss_pred EEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChh-hhcccCCceEEecCccc-ccC
Q 022407 7 VMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQA-MGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 7 ~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~~~~~-~~~ 84 (297)
||+|||+|.||.+||..|+++|++|++||+++++++.+.+ .+..... ........+..++++++ +++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNE-----------KRENVLFLKGVQLASNITFTSDVEKAYNG 85 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHH-----------HTBCTTTSTTCBCCTTEEEESCHHHHHTT
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-----------cCcccccccccccccceeeeCCHHHHHcC
Confidence 8999999999999999999999999999999988776522 1210000 00011234566777765 789
Q ss_pred CcEEEEecccCHHHHHHHHHH----HHhhccC-CeEEeecCCCccHH---HHhhhcCC--CC-eEEEeecCCCCCCC---
Q 022407 85 ADIIVEAIVESEDVKKKLFSE----LDKITKA-SAILASNTSSISIT---RLASATSR--PC-QVIGMHFMNPPPLM--- 150 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~----l~~~~~~-~~ii~s~ts~~~~~---~l~~~~~~--~~-~~~g~h~~~p~~~~--- 150 (297)
||+||.|+|. .....++.+ +.+.+++ +++|++.++++.+. .+.+.+.. +. ... ....|...
T Consensus 86 aDvVilav~~--~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~~~~~~~~~~l~~~~~~~~~~---v~~gp~~~~~~ 160 (366)
T 1evy_A 86 AEIILFVIPT--QFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGEFLPSPLLS---VLAGPSFAIEV 160 (366)
T ss_dssp CSSEEECCCH--HHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCTTTCCCHHHHHTTTSCGGGEE---EEESSCCHHHH
T ss_pred CCEEEECCCh--HHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCCccccCHHHHHHHHCCCCcEE---EEeCCChHHHH
Confidence 9999999985 345677777 8887877 77777777666542 12222211 11 111 11122211
Q ss_pred --cc-eeEecCCCChHHHHHHHHHHHHHh--CCeEEEeccchhh-----hH----------------HH----HHHHHHH
Q 022407 151 --KL-VEVIRGADTSDETFRATKALAERF--GKTVVCSQDYAGF-----IV----------------NR----ILMPMIN 200 (297)
Q Consensus 151 --~~-vev~~~~~~~~~~~~~~~~l~~~l--G~~~v~~~d~~g~-----i~----------------nr----i~~~~~~ 200 (297)
.. ..++.+ ..+++.++.+.++|... +..+++..|..+. +. ++ +....++
T Consensus 161 ~~g~~~~~~~~-~~~~~~~~~v~~ll~~~g~g~~~~~~~di~~~~~~k~~~n~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 239 (366)
T 1evy_A 161 ATGVFTCVSIA-SADINVARRLQRIMSTGDRSFVCWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLL 239 (366)
T ss_dssp HTTCCEEEEEE-CSSHHHHHHHHHHHSCTTSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HhCCceEEEEe-cCCHHHHHHHHHHhcCCCCeEEEEEcCCchHHHHHHHHHhHHHHHHHHHhhccCCccHHHHHHHHHHH
Confidence 11 112222 35678899999999999 8877777765431 11 12 2335688
Q ss_pred HHHHHHHcCCCCHHH
Q 022407 201 EAFFTLYTGVATKED 215 (297)
Q Consensus 201 Ea~~l~~~g~~~~~~ 215 (297)
|++.+++..++++++
T Consensus 240 E~~~la~a~Gi~~~~ 254 (366)
T 1evy_A 240 EIRDLTAALGGDGSA 254 (366)
T ss_dssp HHHHHHHHTTCCCTT
T ss_pred HHHHHHHHhCCCCcc
Confidence 999999876666543
No 78
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=99.55 E-value=3.7e-14 Score=126.44 Aligned_cols=196 Identities=16% Similarity=0.116 Sum_probs=123.8
Q ss_pred CcEEEEECCChhHHHHHHHHHHCC-------CcEEEEeCCHH-----HHHHHHHHHHHHHHHHHHcCCCChh-hhcccCC
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDG-------LDVWLVDTDPD-----ALVRATKSISSSIQKFVSKGQLSQA-MGTDAPR 71 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G-------~~V~~~d~~~~-----~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~ 71 (297)
.+||+|||+|.||.++|..|+++| ++|++||++++ ..+.+. +.+..... .......
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~-----------~~~~~~~~~~~~~~~~ 76 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIIN-----------TQHENVKYLPGHKLPP 76 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHH-----------HHSCCTTTSTTCCCCT
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHH-----------hcCcccccCCcccCcc
Confidence 369999999999999999999999 99999999987 655442 11110000 0001123
Q ss_pred ceEEecCccc-ccCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccH--------HH-HhhhcCCCCeEEEe
Q 022407 72 RLRCTSNLKD-LHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISI--------TR-LASATSRPCQVIGM 141 (297)
Q Consensus 72 ~i~~~~~~~~-~~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~--------~~-l~~~~~~~~~~~g~ 141 (297)
++..++++++ +++||+||+|+|+. ....++.++.+.++++++|++.++++.+ .+ +.+.++.+..+. .
T Consensus 77 ~~~~~~~~~~~~~~aD~Vilav~~~--~~~~v~~~i~~~l~~~~ivv~~~~Gi~~~~~~~~~l~~~l~~~~~~~~~v~-~ 153 (354)
T 1x0v_A 77 NVVAVPDVVQAAEDADILIFVVPHQ--FIGKICDQLKGHLKANATGISLIKGVDEGPNGLKLISEVIGERLGIPMSVL-M 153 (354)
T ss_dssp TEEEESSHHHHHTTCSEEEECCCGG--GHHHHHHHHTTCSCTTCEEEECCCCBCSSSSSCCBHHHHHHHHHTCCEEEE-E
T ss_pred CeEEEcCHHHHHcCCCEEEEeCCHH--HHHHHHHHHHhhCCCCCEEEEECCccCCCCCccccHHHHHHHHcCCCEEEE-E
Confidence 4666777765 78999999999974 3677888898888889998888877652 11 222233211111 1
Q ss_pred ecCCCCCC-Ccc-eeEecCCCChHHHHHHHHHHHHHhCCeEEEeccchhh-----hH----------------H----HH
Q 022407 142 HFMNPPPL-MKL-VEVIRGADTSDETFRATKALAERFGKTVVCSQDYAGF-----IV----------------N----RI 194 (297)
Q Consensus 142 h~~~p~~~-~~~-vev~~~~~~~~~~~~~~~~l~~~lG~~~v~~~d~~g~-----i~----------------n----ri 194 (297)
.+..+... .+. ..++.+ ..+++..+.+.++|+..|..+++..|..+. +. + .+
T Consensus 154 gp~~a~~v~~g~~~~~~~~-~~~~~~~~~v~~ll~~~g~~~~~~~di~~~~~~k~~~N~~~~~~g~~~~~~~~~n~~~~~ 232 (354)
T 1x0v_A 154 GANIASEVADEKFCETTIG-CKDPAQGQLLKELMQTPNFRITVVQEVDTVEICGALKNVVAVGAGFCDGLGFGDNTKAAV 232 (354)
T ss_dssp CSCCHHHHHTTCCEEEEEE-CSSHHHHHHHHHHHCBTTEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred CCCcHHHHHhcCCceEEEE-ECCHHHHHHHHHHhCCCCEEEEEcCCchHhHHHHHHHHHHHHHHHHHHHccCCccHHHHH
Confidence 11111000 011 112222 356788999999999999988888775431 11 2 22
Q ss_pred HHHHHHHHHHHHHcCCC---CHHH
Q 022407 195 LMPMINEAFFTLYTGVA---TKED 215 (297)
Q Consensus 195 ~~~~~~Ea~~l~~~g~~---~~~~ 215 (297)
+...++|+..+++.-++ ++++
T Consensus 233 ~~~~~~E~~~la~a~G~~~~~~~~ 256 (354)
T 1x0v_A 233 IRLGLMEMIAFAKLFCSGPVSSAT 256 (354)
T ss_dssp HHHHHHHHHHHHHHHSSSCCCGGG
T ss_pred HHHHHHHHHHHHHHhcCCCCCccc
Confidence 34567899988876444 5544
No 79
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.55 E-value=8.7e-14 Score=114.89 Aligned_cols=135 Identities=15% Similarity=0.144 Sum_probs=99.4
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcccccC
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHS 84 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 84 (297)
.++|+|||+|.||.++|..|+++|++|++||++++ .+++
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~-----------------------------------------~~~~ 57 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ-----------------------------------------ATTL 57 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC-----------------------------------------CSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH-----------------------------------------Hhcc
Confidence 47899999999999999999999999999998753 3457
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCcc---------------HHHHhhhcCCCCeEEE-eecCCCCC
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSIS---------------ITRLASATSRPCQVIG-MHFMNPPP 148 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~---------------~~~l~~~~~~~~~~~g-~h~~~p~~ 148 (297)
||+||.|+| .. ..+.++.++.+.++ ++++++.+++++ .+.+++.++ ..+++. .|++..|.
T Consensus 58 aD~vi~av~-~~-~~~~v~~~l~~~~~-~~~vi~~~~g~~~~~~~~l~~~~~~~~~~~l~~~l~-~~~vv~~~~~~~~p~ 133 (209)
T 2raf_A 58 GEIVIMAVP-YP-ALAALAKQYATQLK-GKIVVDITNPLNFDTWDDLVVPADSSAAQELQQQLP-DSQVLKAFNTTFAAT 133 (209)
T ss_dssp CSEEEECSC-HH-HHHHHHHHTHHHHT-TSEEEECCCCBCTTTSSSBSSCTTCCHHHHHHHHCT-TSEEEECSTTSCHHH
T ss_pred CCEEEEcCC-cH-HHHHHHHHHHHhcC-CCEEEEECCCCCccccccccCCCCCcHHHHHHHHCC-CCcEEEeeecccHhh
Confidence 999999998 33 35577888877777 888887777665 345666554 357776 56544331
Q ss_pred C-----C---cceeEecCCCChHHHHHHHHHHHHHhCCeEEEeccc
Q 022407 149 L-----M---KLVEVIRGADTSDETFRATKALAERFGKTVVCSQDY 186 (297)
Q Consensus 149 ~-----~---~~vev~~~~~~~~~~~~~~~~l~~~lG~~~v~~~d~ 186 (297)
. . +...++.+ .+++..+.+.++++.+|.+++++++.
T Consensus 134 ~~~~~~~g~~~~~~~~~g--~~~~~~~~v~~ll~~~G~~~~~~~~i 177 (209)
T 2raf_A 134 LQSGQVNGKEPTTVLVAG--NDDSAKQRFTRALADSPLEVKDAGKL 177 (209)
T ss_dssp HHHSEETTTEECEEEEEE--SCHHHHHHHHHHTTTSSCEEEEEESG
T ss_pred ccccccCCCCCceeEEcC--CCHHHHHHHHHHHHHcCCceEeCCCH
Confidence 1 1 12222332 46789999999999999999988773
No 80
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=99.55 E-value=9.2e-14 Score=122.13 Aligned_cols=174 Identities=14% Similarity=0.201 Sum_probs=118.3
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcccccC
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHS 84 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 84 (297)
.+||+|||+|.||..+|..|+++|++|++| +++++++.+. +.|............++..+++.+++++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~-----------~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIE-----------ATGLRLETQSFDEQVKVSASSDPSAVQG 86 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHH-----------HHCEEEECSSCEEEECCEEESCGGGGTT
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHH-----------hCCeEEEcCCCcEEEeeeeeCCHHHcCC
Confidence 479999999999999999999999999999 9988777652 2231100000011234556677777889
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccH-HHHhhhcCCCCeEEEee-c-----CCCCCCCc--ceeE
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISI-TRLASATSRPCQVIGMH-F-----MNPPPLMK--LVEV 155 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~-~~l~~~~~~~~~~~g~h-~-----~~p~~~~~--~vev 155 (297)
+|+||.|+|... ...+++++.+.++++++|++.++++.. +.+.+.++ .++++.. + ..|-.... .-.+
T Consensus 87 ~D~vilavk~~~--~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~l~~~~~--~~vl~g~~~~~a~~~gP~~~~~~~~g~~ 162 (318)
T 3hwr_A 87 ADLVLFCVKSTD--TQSAALAMKPALAKSALVLSLQNGVENADTLRSLLE--QEVAAAVVYVATEMAGPGHVRHHGRGEL 162 (318)
T ss_dssp CSEEEECCCGGG--HHHHHHHHTTTSCTTCEEEEECSSSSHHHHHHHHCC--SEEEEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred CCEEEEEccccc--HHHHHHHHHHhcCCCCEEEEeCCCCCcHHHHHHHcC--CcEEEEEEEEeEEEcCCeEEEEcCCceE
Confidence 999999999763 567888999999999999999999998 56666665 4454321 1 12221111 0112
Q ss_pred ecCCCChHHHHHHHHHHHHHhCCeEEEeccchhhhHHHHHHH
Q 022407 156 IRGADTSDETFRATKALAERFGKTVVCSQDYAGFIVNRILMP 197 (297)
Q Consensus 156 ~~~~~~~~~~~~~~~~l~~~lG~~~v~~~d~~g~i~nri~~~ 197 (297)
..+. .+..+.+.++|...|..+.+..|..+..+..++..
T Consensus 163 ~ig~---~~~~~~l~~~l~~~~~~~~~~~Di~~~~w~Kl~~N 201 (318)
T 3hwr_A 163 VIEP---TSHGANLAAIFAAAGVPVETSDNVRGALWAKLILN 201 (318)
T ss_dssp EECC---CTTTHHHHHHHHHTTCCEEECSCHHHHHHHHHHHH
T ss_pred EEcC---CHHHHHHHHHHHhCCCCcEechHHHHHHHHHHHHH
Confidence 2232 23456778889999998888888777655555443
No 81
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=99.54 E-value=1.1e-13 Score=124.44 Aligned_cols=193 Identities=13% Similarity=0.167 Sum_probs=123.6
Q ss_pred CcEEEEECCChhHHHHHHHHHHCC-------CcEEEEeCCHH-----HHHHHHHHHHHHHHHHHHcCCCChh-hhcccCC
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDG-------LDVWLVDTDPD-----ALVRATKSISSSIQKFVSKGQLSQA-MGTDAPR 71 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G-------~~V~~~d~~~~-----~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~ 71 (297)
++||+|||+|.||.+||..|+++| ++|++||++++ +++.+. +.+..... .......
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~-----------~~~~~~~~~~~~~~~~ 89 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIIN-----------NKHENTKYLKGVPLPH 89 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHH-----------HHCBCTTTSTTCBCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHH-----------hcCcccccCCcccCcC
Confidence 468999999999999999999999 99999999987 555432 21110000 0001223
Q ss_pred ceEEecCccc-ccCCcEEEEecccCHHHHHHHHHHHHh----hccCCeEEeecCCCccH-----HH----HhhhcCCCCe
Q 022407 72 RLRCTSNLKD-LHSADIIVEAIVESEDVKKKLFSELDK----ITKASAILASNTSSISI-----TR----LASATSRPCQ 137 (297)
Q Consensus 72 ~i~~~~~~~~-~~~aD~Vi~~v~e~~~~k~~~~~~l~~----~~~~~~ii~s~ts~~~~-----~~----l~~~~~~~~~ 137 (297)
++..++++++ +++||+||+|+|+ ...++++.++.+ .+++++++++.++++++ .. +.+.++.+..
T Consensus 90 ~i~~~~~~~ea~~~aDvVilav~~--~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~~~~~~~~~l~~~l~~~~~~~~~ 167 (375)
T 1yj8_A 90 NIVAHSDLASVINDADLLIFIVPC--QYLESVLASIKESESIKIASHAKAISLTKGFIVKKNQMKLCSNYISDFLNIPCS 167 (375)
T ss_dssp TEEEESSTHHHHTTCSEEEECCCH--HHHHHHHHHHTC---CCCCTTCEEEECCCSCEEETTEEECHHHHHHHHSSSCEE
T ss_pred CeEEECCHHHHHcCCCEEEEcCCH--HHHHHHHHHHhhhhhccCCCCCEEEEeCCccccCCccccCHHHHHHHHcCCCEE
Confidence 5677777766 7899999999985 447788888888 88889998888877654 11 2222221111
Q ss_pred EEEeecCCCCCCC------cceeEecCCCChHHHHHHHHHHHHHhCCeEEEeccchhh-----hH---------------
Q 022407 138 VIGMHFMNPPPLM------KLVEVIRGADTSDETFRATKALAERFGKTVVCSQDYAGF-----IV--------------- 191 (297)
Q Consensus 138 ~~g~h~~~p~~~~------~~vev~~~~~~~~~~~~~~~~l~~~lG~~~v~~~d~~g~-----i~--------------- 191 (297)
+. ..|... ....++.+ ..+++..+.+.++|...|..+++..|..+. +.
T Consensus 168 v~-----~gp~~a~~v~~g~~~~~~~~-~~~~~~~~~v~~ll~~~g~~~~~~~di~~~~~~k~l~N~~~~~~g~~~~~~~ 241 (375)
T 1yj8_A 168 AL-----SGANIAMDVAMENFSEATIG-GNDKDSLVIWQRVFDLPYFKINCVNETIEVEICGALKNIITLACGFCDGLNL 241 (375)
T ss_dssp EE-----ECSCCHHHHHTTCCEEEEEE-CSCHHHHHHHHHHHCBTTEEEEEESCSHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EE-----eCCchHHHHHhCCCeEEEEe-cCCHHHHHHHHHHhCCCCeEEEEeCCcHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 11 122211 11112222 256788899999999999988888876441 11
Q ss_pred -HH----HHHHHHHHHHHHHHcC--CCCHHHH
Q 022407 192 -NR----ILMPMINEAFFTLYTG--VATKEDI 216 (297)
Q Consensus 192 -nr----i~~~~~~Ea~~l~~~g--~~~~~~i 216 (297)
++ ++...++|+..+++.- +++++.+
T Consensus 242 ~~n~~~a~~~~~~~E~~~la~a~G~G~~~~~~ 273 (375)
T 1yj8_A 242 PTNSKSAIIRNGINEMILFGKVFFQKFNENIL 273 (375)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHSSCCCGGGG
T ss_pred ChhHHHHHHHHHHHHHHHHHHHhccCCCcchh
Confidence 11 2235678888888664 4665443
No 82
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=99.52 E-value=3e-13 Score=119.69 Aligned_cols=189 Identities=15% Similarity=0.093 Sum_probs=112.7
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcccccCC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHSA 85 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~a 85 (297)
+||+|||+|.||+.||..|+++|++|++|||++++++.+ .+.|... ....... .+..++++++++++
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l-----------~~~g~~~-~~~~~~~-~~~~~~~~~~~~~a 81 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLI-----------NVSHTSP-YVEESKI-TVRATNDLEEIKKE 81 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHH-----------HHHSCBT-TBTTCCC-CSEEESCGGGCCTT
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHH-----------HHhCCcc-cCCCCee-eEEEeCCHHHhcCC
Confidence 699999999999999999999999999999999887765 2223100 0000001 35666776668899
Q ss_pred cEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHH---HHhhhcC--CCC-eEEEeecCCCCC--CCcceeEec
Q 022407 86 DIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISIT---RLASATS--RPC-QVIGMHFMNPPP--LMKLVEVIR 157 (297)
Q Consensus 86 D~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~---~l~~~~~--~~~-~~~g~h~~~p~~--~~~~vev~~ 157 (297)
|+||.|+|. .. ..+++.++.+ +++++++.+.++++. .+++.+. .+. ..+...+..+.. ......++.
T Consensus 82 DvVil~vk~-~~-~~~v~~~l~~---~~~~vv~~~nGi~~~~~~~l~~~~~~~~~~~~~~~~~P~~~~~~~~g~~~~~~~ 156 (335)
T 1z82_A 82 DILVIAIPV-QY-IREHLLRLPV---KPSMVLNLSKGIEIKTGKRVSEIVEEILGCPYAVLSGPSHAEEVAKKLPTAVTL 156 (335)
T ss_dssp EEEEECSCG-GG-HHHHHTTCSS---CCSEEEECCCCCCTTTCCCHHHHHHHHTCCCEEEEESSCCHHHHHTTCCEEEEE
T ss_pred CEEEEECCH-HH-HHHHHHHhCc---CCCEEEEEeCCCCCCccCcHHHHHHHHcCCceEEEECCccHHHHhCCCceEEEE
Confidence 999999985 33 3445544433 566777666555432 2222211 011 111111111100 011112222
Q ss_pred CCCChHHHHHHHHHHHHHhCCeEEEeccchhh-----hH----------------H----HHHHHHHHHHHHHHHcCCCC
Q 022407 158 GADTSDETFRATKALAERFGKTVVCSQDYAGF-----IV----------------N----RILMPMINEAFFTLYTGVAT 212 (297)
Q Consensus 158 ~~~~~~~~~~~~~~l~~~lG~~~v~~~d~~g~-----i~----------------n----ri~~~~~~Ea~~l~~~g~~~ 212 (297)
+. .+ ++.+.++|...|..+++..|..+. +. + .++...+.|+..+++..+++
T Consensus 157 g~-~~---~~~~~~ll~~~g~~~~~~~di~~~~~~k~l~N~~~~~~g~~~g~~~~~n~~~a~~~~~~~E~~~la~a~G~~ 232 (335)
T 1z82_A 157 AG-EN---SKELQKRISTEYFRVYTCEDVVGVEIAGALKNVIAIAAGILDGFGGWDNAKAALETRGIYEIARFGMFFGAD 232 (335)
T ss_dssp EE-TT---HHHHHHHHCCSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred Ee-hh---HHHHHHHhCCCCEEEEecCchHHHHHHHHHHhHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHhCCC
Confidence 21 12 778899999999888877765331 11 2 23346788999999887777
Q ss_pred HHHH
Q 022407 213 KEDI 216 (297)
Q Consensus 213 ~~~i 216 (297)
++.+
T Consensus 233 ~~~~ 236 (335)
T 1z82_A 233 QKTF 236 (335)
T ss_dssp HHHH
T ss_pred hhhh
Confidence 7654
No 83
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.52 E-value=9.9e-14 Score=120.81 Aligned_cols=139 Identities=17% Similarity=0.228 Sum_probs=103.1
Q ss_pred CcEEEEEC-CChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccccc
Q 022407 5 MKVMGVVG-SGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLH 83 (297)
Q Consensus 5 ~~~V~iiG-~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 83 (297)
+++|+||| +|.||.++|..|+++|++|++||++++. +..+.++
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~------------------------------------~~~~~~~ 64 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA------------------------------------VAESILA 64 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG------------------------------------GHHHHHT
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc------------------------------------CHHHHhc
Confidence 45899999 9999999999999999999999988641 0112357
Q ss_pred CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCcc--HHHHhhhcCCCCeEEEeecCCCCCC----CcceeEec
Q 022407 84 SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSIS--ITRLASATSRPCQVIGMHFMNPPPL----MKLVEVIR 157 (297)
Q Consensus 84 ~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~--~~~l~~~~~~~~~~~g~h~~~p~~~----~~~vev~~ 157 (297)
+||+||.|+|... ...++.++.+.++++++|+..++.-. .+.+.... +.++++.||+.+|.. ...+.+++
T Consensus 65 ~aDvVilavp~~~--~~~vl~~l~~~l~~~~iv~~~~svk~~~~~~~~~~~--~~~~v~~hP~~g~~~~~~~g~~~~l~~ 140 (298)
T 2pv7_A 65 NADVVIVSVPINL--TLETIERLKPYLTENMLLADLTSVKREPLAKMLEVH--TGAVLGLHPMFGADIASMAKQVVVRCD 140 (298)
T ss_dssp TCSEEEECSCGGG--HHHHHHHHGGGCCTTSEEEECCSCCHHHHHHHHHHC--SSEEEEEEECSCTTCSCCTTCEEEEEE
T ss_pred CCCEEEEeCCHHH--HHHHHHHHHhhcCCCcEEEECCCCCcHHHHHHHHhc--CCCEEeeCCCCCCCchhhcCCeEEEec
Confidence 8999999999766 66788889888888887765443321 24454443 468999999765532 11233444
Q ss_pred CCCChHHHHHHHHHHHHHhCCeEEEecc
Q 022407 158 GADTSDETFRATKALAERFGKTVVCSQD 185 (297)
Q Consensus 158 ~~~~~~~~~~~~~~l~~~lG~~~v~~~d 185 (297)
+ .+++.++.+.++++.+|..++++.+
T Consensus 141 ~--~~~~~~~~v~~l~~~~G~~~~~~~~ 166 (298)
T 2pv7_A 141 G--RFPERYEWLLEQIQIWGAKIYQTNA 166 (298)
T ss_dssp E--ECGGGTHHHHHHHHHTTCEEEECCH
T ss_pred C--CCHHHHHHHHHHHHHcCCEEEECCH
Confidence 4 2678899999999999999888754
No 84
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=99.51 E-value=3.7e-14 Score=122.80 Aligned_cols=163 Identities=9% Similarity=0.062 Sum_probs=106.5
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcccccCC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHSA 85 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~a 85 (297)
|||+|||+|.||..+|..|+++|++|++||+++++++.+ ...+.. . .....++. .++.+.++++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l-----------~~~~~~-~---~~~~~~~~-~~~~~~~~~~ 64 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSV-----------NLVETD-G---SIFNESLT-ANDPDFLATS 64 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEE-----------EEECTT-S---CEEEEEEE-ESCHHHHHTC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCccceeeE-----------EEEcCC-C---ceeeeeee-ecCccccCCC
Confidence 489999999999999999999999999999997644321 111100 0 00001112 2344457899
Q ss_pred cEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccH-HHHhhhcCCCCeEE-EeecC-----CCCCCC----ccee
Q 022407 86 DIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISI-TRLASATSRPCQVI-GMHFM-----NPPPLM----KLVE 154 (297)
Q Consensus 86 D~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~-~~l~~~~~~~~~~~-g~h~~-----~p~~~~----~~ve 154 (297)
|+||.|+|... ...++.++.+.++++++|++.++++.. +.+.+.++ . ++ |.+++ .| ... +.+.
T Consensus 65 d~vi~~v~~~~--~~~v~~~l~~~l~~~~~vv~~~~g~~~~~~l~~~~~--~-~~~g~~~~~~~~~~p-~~~~~~~g~~~ 138 (291)
T 1ks9_A 65 DLLLVTLKAWQ--VSDAVKSLASTLPVTTPILLIHNGMGTIEELQNIQQ--P-LLMGTTTHAARRDGN-VIIHVANGITH 138 (291)
T ss_dssp SEEEECSCGGG--HHHHHHHHHTTSCTTSCEEEECSSSCTTGGGTTCCS--C-EEEEEECCEEEEETT-EEEEEECCCEE
T ss_pred CEEEEEecHHh--HHHHHHHHHhhCCCCCEEEEecCCCCcHHHHHHhcC--C-eEEEEEeEccEEcCC-EEEEecccceE
Confidence 99999999765 467888898888888888777777766 35555443 2 33 43332 23 110 1122
Q ss_pred EecCCCChHHHHHHHHHHHHHhCCeEEEeccchhhhH
Q 022407 155 VIRGADTSDETFRATKALAERFGKTVVCSQDYAGFIV 191 (297)
Q Consensus 155 v~~~~~~~~~~~~~~~~l~~~lG~~~v~~~d~~g~i~ 191 (297)
+... .++++.++.+.++|+.+|..+++.+|..+..+
T Consensus 139 i~~~-~~~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~ 174 (291)
T 1ks9_A 139 IGPA-RQQDGDYSYLADILQTVLPDVAWHNNIRAELW 174 (291)
T ss_dssp EEES-SGGGTTCTHHHHHHHTTSSCEEECTTHHHHHH
T ss_pred EccC-CCCcchHHHHHHHHHhcCCCCeecHHHHHHHH
Confidence 2221 24567788899999999999888887655433
No 85
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=99.49 E-value=4.1e-13 Score=118.64 Aligned_cols=193 Identities=15% Similarity=0.130 Sum_probs=121.8
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeC--CHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEec--Cccc
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDT--DPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTS--NLKD 81 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~--~~~~ 81 (297)
|||+|||+|.||..+|..|+++|++|++||+ ++++++.+ .+.|....... . ..++..++ ++++
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~-----------~~~~~~~~~g~-~-~~~~~~~~~~~~~~ 67 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSI-----------SAGREHPRLGV-K-LNGVEIFWPEQLEK 67 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHH-----------HTTCCBTTTTB-C-CCSEEEECGGGHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHH-----------HHhCcCcccCc-c-ccceEEecHHhHHH
Confidence 4899999999999999999999999999999 88877655 33332100000 0 13345555 5555
Q ss_pred -ccCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCc---c---HHHHhhhcCC--CCeEEEeecCCCCCCC--
Q 022407 82 -LHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSI---S---ITRLASATSR--PCQVIGMHFMNPPPLM-- 150 (297)
Q Consensus 82 -~~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~---~---~~~l~~~~~~--~~~~~g~h~~~p~~~~-- 150 (297)
++++|+||.|+|... ...++.++.+ ++++++|++.+.++ + .+.+.+.++. +..........|....
T Consensus 68 ~~~~~D~vi~~v~~~~--~~~v~~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~p~~~~~~ 144 (335)
T 1txg_A 68 CLENAEVVLLGVSTDG--VLPVMSRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRLKHDLRERTVAITGPAIAREV 144 (335)
T ss_dssp HHTTCSEEEECSCGGG--HHHHHHHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTTSTTCGGGEEEEESSCCHHHH
T ss_pred HHhcCCEEEEcCChHH--HHHHHHHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHHhcCCCCcEEEEECCCcHHHH
Confidence 789999999999763 5677888888 88888888777666 2 2345444432 1100001111222110
Q ss_pred --cc-eeEecCCCChHHHHHHHHHHHHHhCCeEEEeccchhh---------------------hH-----HH----HHHH
Q 022407 151 --KL-VEVIRGADTSDETFRATKALAERFGKTVVCSQDYAGF---------------------IV-----NR----ILMP 197 (297)
Q Consensus 151 --~~-vev~~~~~~~~~~~~~~~~l~~~lG~~~v~~~d~~g~---------------------i~-----nr----i~~~ 197 (297)
.. ..++.+. .+++.++.+.++|+..|..+++..|..+. +. ++ ++..
T Consensus 145 ~~g~~~~~~~~~-~~~~~~~~~~~ll~~~g~~~~~~~di~~~~~~k~~~N~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~ 223 (335)
T 1txg_A 145 AKRMPTTVVFSS-PSESSANKMKEIFETEYFGVEVTTDIIGTEITSALKNVYSIAIAWIRGYESRKNVEMSNAKGVIATR 223 (335)
T ss_dssp HTTCCEEEEEEC-SCHHHHHHHHHHHCBTTEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHH
T ss_pred HccCCcEEEEEe-CCHHHHHHHHHHhCCCcEEEEecCchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence 11 1233332 46788999999999999888877774321 11 22 2345
Q ss_pred HHHHHHHHHHcCCCCHHH
Q 022407 198 MINEAFFTLYTGVATKED 215 (297)
Q Consensus 198 ~~~Ea~~l~~~g~~~~~~ 215 (297)
.++|+..+++.-++++++
T Consensus 224 ~~~E~~~la~~~G~~~~~ 241 (335)
T 1txg_A 224 AINEMAELIEILGGDRET 241 (335)
T ss_dssp HHHHHHHHHHHHTSCGGG
T ss_pred HHHHHHHHHHHHCCCcch
Confidence 678998888765556544
No 86
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=99.49 E-value=7e-14 Score=115.97 Aligned_cols=147 Identities=22% Similarity=0.256 Sum_probs=101.2
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-cc
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LH 83 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~ 83 (297)
.++|+|||+|.||..+|..|+++|++|+++|+++++++.+ .+.| +... +.++ ++
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~-----------~~~g-------------~~~~-~~~~~~~ 82 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARL-----------FPSA-------------AQVT-FQEEAVS 82 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHH-----------SBTT-------------SEEE-EHHHHTT
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----------HHcC-------------Ccee-cHHHHHh
Confidence 4689999999999999999999999999999998876554 1112 2333 4444 78
Q ss_pred CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHHHHh----------hhcCCCCeEEEeecCCCCC-----
Q 022407 84 SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLA----------SATSRPCQVIGMHFMNPPP----- 148 (297)
Q Consensus 84 ~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~~l~----------~~~~~~~~~~g~h~~~p~~----- 148 (297)
++|+||.|+|... ...+++ +.+.. +++++++.+++.+.+.+. +.++ ..+++.. +++..
T Consensus 83 ~~DvVi~av~~~~--~~~v~~-l~~~~-~~~~vv~~s~g~~~~~l~~~~~~~~~l~~~l~-~~~vv~~--~n~~~~~~~~ 155 (215)
T 2vns_A 83 SPEVIFVAVFREH--YSSLCS-LSDQL-AGKILVDVSNPTEQEHLQHRESNAEYLASLFP-TCTVVKA--FNVISAWTLQ 155 (215)
T ss_dssp SCSEEEECSCGGG--SGGGGG-GHHHH-TTCEEEECCCCCHHHHHHCSSCHHHHHHHHCT-TSEEEEE--CTTBCHHHHH
T ss_pred CCCEEEECCChHH--HHHHHH-HHHhc-CCCEEEEeCCCcccccccccccHHHHHHHHCC-CCeEEec--cccccHhHhc
Confidence 9999999998643 334444 55555 678888888888765442 3343 2355542 12211
Q ss_pred --C--CcceeEecCCCChHHHHHHHHHHHHHhCCeEEEecc
Q 022407 149 --L--MKLVEVIRGADTSDETFRATKALAERFGKTVVCSQD 185 (297)
Q Consensus 149 --~--~~~vev~~~~~~~~~~~~~~~~l~~~lG~~~v~~~d 185 (297)
. .+...++.+ ++++.++.++++++.+|.+++++++
T Consensus 156 ~~~~~g~~~~~~~g--~~~~~~~~v~~ll~~~G~~~~~~g~ 194 (215)
T 2vns_A 156 AGPRDGNRQVPICG--DQPEAKRAVSEMALAMGFMPVDMGS 194 (215)
T ss_dssp TCSCSSCCEEEEEE--SCHHHHHHHHHHHHHTTCEEEECCS
T ss_pred ccccCCceeEEEec--CCHHHHHHHHHHHHHcCCceEeecc
Confidence 0 111123332 5789999999999999999999876
No 87
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=99.47 E-value=4.8e-13 Score=117.76 Aligned_cols=122 Identities=20% Similarity=0.296 Sum_probs=87.8
Q ss_pred cEEEEECCChhHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcccccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGL-DVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 84 (297)
+||+|||+|.||.++|..|+..|+ +|++||+++++++.....+.+....+ ....+++.+++++++++
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~------------~~~~~i~~t~d~~al~~ 82 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALI------------GSPAKIFGENNYEYLQN 82 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHH------------TCCCCEEEESCGGGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhcc------------CCCCEEEECCCHHHHCC
Confidence 589999999999999999999999 99999999998876544444433211 12346778788877999
Q ss_pred CcEEEEec--cc------------CHHHHHHHHHHHHhhccCCeEE--eecCCCccHHHHhhhcC--CCCeEEEe
Q 022407 85 ADIIVEAI--VE------------SEDVKKKLFSELDKITKASAIL--ASNTSSISITRLASATS--RPCQVIGM 141 (297)
Q Consensus 85 aD~Vi~~v--~e------------~~~~k~~~~~~l~~~~~~~~ii--~s~ts~~~~~~l~~~~~--~~~~~~g~ 141 (297)
||+||+++ |. +..+++++++++.++++ ++++ +||++++. ..++.... .|.|++|+
T Consensus 83 aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p-~a~viv~tNP~~~~-t~~~~~~~~~~~~rviG~ 155 (328)
T 2hjr_A 83 SDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCP-NAFVICITNPLDAM-VYYFKEKSGIPANKVCGM 155 (328)
T ss_dssp CSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCT-TCEEEECCSSHHHH-HHHHHHHHCCCGGGEEES
T ss_pred CCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCC-CeEEEEecCchHHH-HHHHHHhcCCChhhEEEe
Confidence 99999998 54 34678899999999984 5544 56655543 33333222 34566654
No 88
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=99.47 E-value=3e-13 Score=119.72 Aligned_cols=169 Identities=16% Similarity=0.243 Sum_probs=109.2
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcccccC
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHS 84 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 84 (297)
.+||+|||+|.||..+|..|+++|++|++|+++ +..+.+ .+.|............++..+++++++++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~-~~~~~~-----------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG-ATLQAL-----------QTAGLRLTEDGATHTLPVRATHDAAALGE 70 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH-HHHHHH-----------HHTCEEEEETTEEEEECCEEESCHHHHCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh-HHHHHH-----------HHCCCEEecCCCeEEEeeeEECCHHHcCC
Confidence 468999999999999999999999999999995 444443 33332110000011123455667777889
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCcc-------------------H-HHHhhhcCCCCeEE-Eeec
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSIS-------------------I-TRLASATSRPCQVI-GMHF 143 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~-------------------~-~~l~~~~~~~~~~~-g~h~ 143 (297)
+|+||.|+|.. . ...+++++.+.++++++|++.+.+++ . +.+.+.++. .+++ +..+
T Consensus 71 ~D~Vilavk~~-~-~~~~~~~l~~~l~~~~~iv~~~nGi~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~-~~v~~gv~~ 147 (335)
T 3ghy_A 71 QDVVIVAVKAP-A-LESVAAGIAPLIGPGTCVVVAMNGVPWWFFDRPGPLQGQRLQAVDPHGRIAQAIPT-RHVLGCVVH 147 (335)
T ss_dssp CSEEEECCCHH-H-HHHHHGGGSSSCCTTCEEEECCSSSCTTTTCSSSTTTTCCCTTTCTTSHHHHHSCG-GGEEEEEEC
T ss_pred CCEEEEeCCch-h-HHHHHHHHHhhCCCCCEEEEECCCCccccccccccccccccccCCcHHHHHHhcCc-ccEEEEEEE
Confidence 99999999863 3 45777888888888999988888853 2 245555543 3443 3322
Q ss_pred CC----CCCCCc---ceeEecC--CCChHHHHHHHHHHHHHhCCeEEEeccchh
Q 022407 144 MN----PPPLMK---LVEVIRG--ADTSDETFRATKALAERFGKTVVCSQDYAG 188 (297)
Q Consensus 144 ~~----p~~~~~---~vev~~~--~~~~~~~~~~~~~l~~~lG~~~v~~~d~~g 188 (297)
.. .|.... .-.+..| ...+.+..+.+.++|...|..+.+..|..+
T Consensus 148 ~~a~~~~pg~v~~~~~g~~~iG~~~~~~~~~~~~l~~~l~~~g~~~~~~~di~~ 201 (335)
T 3ghy_A 148 LTCATVSPGHIRHGNGRRLILGEPAGGASPRLASIAALFGRAGLQAECSEAIQR 201 (335)
T ss_dssp CCEEESSTTEEEECSCCEEEEECTTCSCCHHHHHHHHHHHHTTCEEEECSCHHH
T ss_pred EEEEEcCCcEEEECCCCeEEEecCCCCcCHHHHHHHHHHHhCCCCcEeCchHHH
Confidence 21 111100 0112222 223456778888999999998888777655
No 89
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=99.46 E-value=1.4e-13 Score=133.13 Aligned_cols=89 Identities=25% Similarity=0.390 Sum_probs=83.4
Q ss_pred hhhhHHHHHHHHHHHHHHHHHcCCC-CHHHHHHHHhhccCCCc---cHHHHHHhhchHHHHHHHHHHHhhcCCCCCCCcH
Q 022407 187 AGFIVNRILMPMINEAFFTLYTGVA-TKEDIDAGMKLGTNQPM---GPLQLADFIGLDVCLSIMKVLHTGLGDSKYAPCP 262 (297)
Q Consensus 187 ~g~i~nri~~~~~~Ea~~l~~~g~~-~~~~id~a~~~g~g~~~---Gp~~~~D~~Gl~~~~~~~~~~~~~~~~~~~~~~~ 262 (297)
.+.+.+|++.+++||+++++++|++ +++|||.++.+|+|||. |||+|+|.+|++.++..++.+++.+++ +|+|++
T Consensus 624 ~~~i~~r~l~~~~nea~~~l~egi~~~~~diD~~~~~G~g~p~~~GGp~~~~d~~G~~~~~~~~~~~~~~~g~-~~~p~~ 702 (725)
T 2wtb_A 624 EKDIIEMTFFPVVNEACRVFAEGIAVKAADLDIAGIMGMGFPPYRGGIMFWADSIGSKYIYSRLDEWSKAYGE-FFKPCA 702 (725)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHCCCGGGCCHHHHHHHHCHHHHHHHHHHHHHHHCG-GGCCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHhCHHHHHHHHHHHHHHcCC-CCCCCH
Confidence 3579999999999999999999998 79999999999999999 999999999999999999999999996 799999
Q ss_pred HHHHHHHcCCCCcccCCcccc
Q 022407 263 LLVQYVDAGRLGKKRGIGVFD 283 (297)
Q Consensus 263 ~l~~~~~~g~~G~~~g~Gfy~ 283 (297)
+|++|+++| ++||.
T Consensus 703 ~l~~~~~~g-------~~f~~ 716 (725)
T 2wtb_A 703 FLAERGSKG-------VLLSA 716 (725)
T ss_dssp HHHHHHHHT-------CCSSS
T ss_pred HHHHHHHcC-------CCccc
Confidence 999999876 57985
No 90
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=99.46 E-value=1.9e-13 Score=120.57 Aligned_cols=128 Identities=16% Similarity=0.263 Sum_probs=89.5
Q ss_pred CCCCCcEEEEECCChhHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCc
Q 022407 1 MEEKMKVMGVVGSGQMGSGIAQLGVMDGL-DVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNL 79 (297)
Q Consensus 1 M~~~~~~V~iiG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 79 (297)
|....+||+|||+|.||.++|..|+..|+ +|++||+++++++.....+.+.+..+ + ...+++.++|+
T Consensus 5 ~~~~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~---~---------~~~~i~~t~d~ 72 (331)
T 1pzg_A 5 LVQRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVV---D---------TNVSVRAEYSY 72 (331)
T ss_dssp CCSCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHT---T---------CCCCEEEECSH
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhcc---C---------CCCEEEEeCCH
Confidence 33344799999999999999999999999 99999999988877544444443211 1 23457778888
Q ss_pred c-cccCCcEEEEec--ccCH-----------------HHHHHHHHHHHhhccCCeEE--eecCCCccHHHHhhhcC-CCC
Q 022407 80 K-DLHSADIIVEAI--VESE-----------------DVKKKLFSELDKITKASAIL--ASNTSSISITRLASATS-RPC 136 (297)
Q Consensus 80 ~-~~~~aD~Vi~~v--~e~~-----------------~~k~~~~~~l~~~~~~~~ii--~s~ts~~~~~~l~~~~~-~~~ 136 (297)
+ ++++||+||+++ |++. .+++++++++.+++ +++++ .||++++....+.+... .+.
T Consensus 73 ~ea~~~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~tNP~~~~t~~~~~~~~~~~~ 151 (331)
T 1pzg_A 73 EAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIVVTNPLDCMVKVMCEASGVPTN 151 (331)
T ss_dssp HHHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHHHHHHHHHHHCCCGG
T ss_pred HHHhCCCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcCchHHHHHHHHHhcCCChh
Confidence 8 599999999998 6543 34788899999998 56555 45555443222223322 345
Q ss_pred eEEEe
Q 022407 137 QVIGM 141 (297)
Q Consensus 137 ~~~g~ 141 (297)
|++|+
T Consensus 152 rviG~ 156 (331)
T 1pzg_A 152 MICGM 156 (331)
T ss_dssp GEEEC
T ss_pred cEEec
Confidence 66665
No 91
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.45 E-value=1.8e-13 Score=132.21 Aligned_cols=88 Identities=26% Similarity=0.466 Sum_probs=81.7
Q ss_pred hhhhHHHHHHHHHHHHHHHHHcCCC-CHHHHHHHHhhccCCCc---cHHHHHHhhchHHHHHHHHHHHhhcCCCCCCCcH
Q 022407 187 AGFIVNRILMPMINEAFFTLYTGVA-TKEDIDAGMKLGTNQPM---GPLQLADFIGLDVCLSIMKVLHTGLGDSKYAPCP 262 (297)
Q Consensus 187 ~g~i~nri~~~~~~Ea~~l~~~g~~-~~~~id~a~~~g~g~~~---Gp~~~~D~~Gl~~~~~~~~~~~~~~~~~~~~~~~ 262 (297)
.+.+.+|++.+++||+++++++|++ +++|||.++.+|+|||. |||+|+|.+|++.++..++.+ +.+++ +|+|++
T Consensus 624 ~~~i~~r~l~~~~nea~~~l~egi~~~~~diD~~~~~G~g~p~~~GGp~~~~d~~G~~~~~~~~~~~-~~~g~-~~~p~~ 701 (715)
T 1wdk_A 624 DEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVYGIGFPLFRGGALRYIDSIGVAEFVALADQY-AELGA-LYHPTA 701 (715)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSSSSHHHHHHHHHHHTCCCGGGCCHHHHHHHHCHHHHHHHHHHT-GGGCG-GGCCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHhCCCCCCCCCCHHHHHHHhCHHHHHHHHHHH-HhcCC-CCCCCH
Confidence 3569999999999999999999998 79999999999999999 999999999999999999999 88885 899999
Q ss_pred HHHHHHHcCCCCcccCCcccc
Q 022407 263 LLVQYVDAGRLGKKRGIGVFD 283 (297)
Q Consensus 263 ~l~~~~~~g~~G~~~g~Gfy~ 283 (297)
+|++|+++| ++||.
T Consensus 702 ~l~~~~~~g-------~~f~~ 715 (715)
T 1wdk_A 702 KLREMAKNG-------QSFFG 715 (715)
T ss_dssp HHHHHHHTT-------CCSCC
T ss_pred HHHHHHHcC-------CCCCC
Confidence 999999887 57883
No 92
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=99.45 E-value=1.9e-12 Score=113.41 Aligned_cols=174 Identities=11% Similarity=0.123 Sum_probs=112.9
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCh-hhhcccCCceEEecCcccccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQ-AMGTDAPRRLRCTSNLKDLHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~~~~~~~~ 84 (297)
+||+|||+|.||+.+|..|+++|++|++|+|++ .+.+ .+.|.... .........+..+++.++++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~~~i-----------~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~ 69 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD--YEAI-----------AGNGLKVFSINGDFTLPHVKGYRAPEEIGP 69 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT--HHHH-----------HHTCEEEEETTCCEEESCCCEESCHHHHCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc--HHHH-----------HhCCCEEEcCCCeEEEeeceeecCHHHcCC
Confidence 589999999999999999999999999999985 2333 23332100 000000113345566666889
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccH-HHHhhhcCCCCeEEE-eec-----CCCCCC---Cc-ce
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISI-TRLASATSRPCQVIG-MHF-----MNPPPL---MK-LV 153 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~-~~l~~~~~~~~~~~g-~h~-----~~p~~~---~~-~v 153 (297)
+|+||.|++... ...+++++.+.++++++|++...++.. +.+.+.++. .+++. +.+ ..|-.. .+ .+
T Consensus 70 ~D~vilavk~~~--~~~~l~~l~~~l~~~~~iv~l~nGi~~~~~l~~~~~~-~~v~~~~~~~~a~~~~p~~v~~~~~g~~ 146 (312)
T 3hn2_A 70 MDLVLVGLKTFA--NSRYEELIRPLVEEGTQILTLQNGLGNEEALATLFGA-ERIIGGVAFLCSNRGEPGEVHHLGAGRI 146 (312)
T ss_dssp CSEEEECCCGGG--GGGHHHHHGGGCCTTCEEEECCSSSSHHHHHHHHTCG-GGEEEEEEEEECCBCSSSEEEECEEEEE
T ss_pred CCEEEEecCCCC--cHHHHHHHHhhcCCCCEEEEecCCCCcHHHHHHHCCC-CcEEEEEEEeeeEEcCCcEEEECCCCeE
Confidence 999999998654 447888899999999999999999975 566666643 23333 221 112111 01 12
Q ss_pred eEecCCCChHHHHHHHHHHHHHhCCeEEEeccchhhhHHHHH
Q 022407 154 EVIRGADTSDETFRATKALAERFGKTVVCSQDYAGFIVNRIL 195 (297)
Q Consensus 154 ev~~~~~~~~~~~~~~~~l~~~lG~~~v~~~d~~g~i~nri~ 195 (297)
.+-.....+.+..+.+.++|...|....+..|..+..+..++
T Consensus 147 ~ig~~~~~~~~~~~~l~~~l~~~g~~~~~~~di~~~~w~Kl~ 188 (312)
T 3hn2_A 147 ILGEFLPRDTGRIEELAAMFRQAGVDCRTTDDLKRARWEKLV 188 (312)
T ss_dssp EEEESSCCCSHHHHHHHHHHHHTTCCEEECSCHHHHHHHHHH
T ss_pred EEecCCCCccHHHHHHHHHHHhCCCCcEEChHHHHHHHHHHH
Confidence 222223344567788899999999988888887654444433
No 93
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=99.43 E-value=1e-12 Score=115.37 Aligned_cols=123 Identities=20% Similarity=0.259 Sum_probs=87.2
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccccc
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGL-DVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLH 83 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 83 (297)
++||+|||+|.||.++|..|+..|+ +|.++|+++++++.....+++.+... ....+++.++++++++
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~------------~~~~~i~~t~d~~al~ 71 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMA------------YSNCKVSGSNTYDDLA 71 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHH------------TCCCCEEEECCGGGGT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhc------------CCCcEEEECCCHHHhC
Confidence 4699999999999999999999999 99999999988876555444433211 1224577778887799
Q ss_pred CCcEEEEec--ccCH-----------------HHHHHHHHHHHhhccCCeEE--eecCCCccHHHHhhhcC--CCCeEEE
Q 022407 84 SADIIVEAI--VESE-----------------DVKKKLFSELDKITKASAIL--ASNTSSISITRLASATS--RPCQVIG 140 (297)
Q Consensus 84 ~aD~Vi~~v--~e~~-----------------~~k~~~~~~l~~~~~~~~ii--~s~ts~~~~~~l~~~~~--~~~~~~g 140 (297)
+||+||+++ |++. .+++++++++.++++ ++++ +||++++. ..++.... .+.|++|
T Consensus 72 ~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p-~a~iiv~tNP~~~~-t~~~~~~~g~~~~rviG 149 (322)
T 1t2d_A 72 GADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCP-NAFIIVVTNPVDVM-VQLLHQHSGVPKNKIIG 149 (322)
T ss_dssp TCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCT-TSEEEECSSSHHHH-HHHHHHHHCCCGGGEEE
T ss_pred CCCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCC-CeEEEEecCChHHH-HHHHHHhcCCChHHEEe
Confidence 999999998 5432 368889999999984 5544 46655544 33333222 3455555
Q ss_pred e
Q 022407 141 M 141 (297)
Q Consensus 141 ~ 141 (297)
+
T Consensus 150 ~ 150 (322)
T 1t2d_A 150 L 150 (322)
T ss_dssp C
T ss_pred c
Confidence 4
No 94
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=99.42 E-value=2e-12 Score=113.66 Aligned_cols=168 Identities=19% Similarity=0.223 Sum_probs=110.2
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCC-CCh-hhhcccCCceEEecCccccc
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQ-LSQ-AMGTDAPRRLRCTSNLKDLH 83 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~-~~~-~~~~~~~~~i~~~~~~~~~~ 83 (297)
+||+|||+|.||+.+|..|+++|++|++|+|++ .+.+ .+.|. +.. ...+.....+..+++.+++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~~~i-----------~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~ 69 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD--YETV-----------KAKGIRIRSATLGDYTFRPAAVVRSAAELE 69 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT--HHHH-----------HHHCEEEEETTTCCEEECCSCEESCGGGCS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh--HHHH-----------HhCCcEEeecCCCcEEEeeeeeECCHHHcC
Confidence 689999999999999999999999999999986 2333 22231 000 00000111244566777754
Q ss_pred -CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccH-HHHhhhcCCCCeEE-EeecC-----CCCCCC--cce
Q 022407 84 -SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISI-TRLASATSRPCQVI-GMHFM-----NPPPLM--KLV 153 (297)
Q Consensus 84 -~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~-~~l~~~~~~~~~~~-g~h~~-----~p~~~~--~~v 153 (297)
++|+||.|+|... ...+++++.+.++++++|++.+.++.. +.+.+.++.. +++ |..+. .|-.+. ..-
T Consensus 70 ~~~DlVilavK~~~--~~~~l~~l~~~l~~~t~Iv~~~nGi~~~~~l~~~~~~~-~vl~g~~~~~a~~~~pg~v~~~~~~ 146 (320)
T 3i83_A 70 TKPDCTLLCIKVVE--GADRVGLLRDAVAPDTGIVLISNGIDIEPEVAAAFPDN-EVISGLAFIGVTRTAPGEIWHQAYG 146 (320)
T ss_dssp SCCSEEEECCCCCT--TCCHHHHHTTSCCTTCEEEEECSSSSCSHHHHHHSTTS-CEEEEEEEEEEEEEETTEEEEEEEE
T ss_pred CCCCEEEEecCCCC--hHHHHHHHHhhcCCCCEEEEeCCCCChHHHHHHHCCCC-cEEEEEEEeceEEcCCCEEEECCCC
Confidence 8999999998765 346778888888889988888999875 6677766543 333 33222 121111 011
Q ss_pred eEecC--CCChHHHHHHHHHHHHHhCCeEEEeccchhh
Q 022407 154 EVIRG--ADTSDETFRATKALAERFGKTVVCSQDYAGF 189 (297)
Q Consensus 154 ev~~~--~~~~~~~~~~~~~l~~~lG~~~v~~~d~~g~ 189 (297)
.+..+ ...+.+..+.+.++|...|..+.+..|..+.
T Consensus 147 ~~~ig~~~~~~~~~~~~l~~~l~~~~~~~~~~~di~~~ 184 (320)
T 3i83_A 147 RLMLGNYPGGVSERVKTLAAAFEEAGIDGIATENITTA 184 (320)
T ss_dssp EEEEEESSSCCCHHHHHHHHHHHHTTSCEEECSCHHHH
T ss_pred EEEEecCCCCccHHHHHHHHHHHhCCCCceECHHHHHH
Confidence 22222 2344567788899999999988888876554
No 95
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=99.02 E-value=9.4e-14 Score=113.88 Aligned_cols=147 Identities=16% Similarity=0.205 Sum_probs=97.1
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcc-cccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLK-DLHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~~~~ 84 (297)
++|+|||+|.||..+|..|.++|++|++||++++ .+.+ .+.| +... +.+ .+++
T Consensus 20 ~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~-~~~~-----------~~~g-------------~~~~-~~~~~~~~ 73 (201)
T 2yjz_A 20 GVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ-VSSL-----------LPRG-------------AEVL-CYSEAASR 73 (201)
Confidence 5899999999999999999999999999999876 3222 1112 1223 343 3788
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccH--------HHHhhhcCCCCeEEEeecCCCCCCCc--ce-
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISI--------TRLASATSRPCQVIGMHFMNPPPLMK--LV- 153 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~--------~~l~~~~~~~~~~~g~h~~~p~~~~~--~v- 153 (297)
+|+||.++|.. .+ +.++ ++... .++++|++.+++++. +.+.+.++. .+++...+..|..... .+
T Consensus 74 aDvVilav~~~-~~-~~v~-~l~~~-~~~~ivI~~~~G~~~~~~~~~~~~~l~~~~~~-~~vvra~~n~~a~~~~~g~l~ 148 (201)
T 2yjz_A 74 SDVIVLAVHRE-HY-DFLA-ELADS-LKGRVLIDVSNNQKMNQYPESNAEYLAQLVPG-AHVVKAFNTISAWALQSGTLD 148 (201)
Confidence 99999999864 33 3444 44443 356777777777752 344444432 3444443333332221 11
Q ss_pred ----eEecCCCChHHHHHHHHHHHHHhCCeEEEecc
Q 022407 154 ----EVIRGADTSDETFRATKALAERFGKTVVCSQD 185 (297)
Q Consensus 154 ----ev~~~~~~~~~~~~~~~~l~~~lG~~~v~~~d 185 (297)
.++.+ .+++.++.+.++|+.+|++++++++
T Consensus 149 g~~~~~~~g--~~~~~~~~v~~ll~~~G~~~~~~G~ 182 (201)
T 2yjz_A 149 ASRQVFVCG--NDSKAKDRVMDIARTLGLTPLDQGS 182 (201)
Confidence 23443 4688899999999999999998876
No 96
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=99.32 E-value=1.4e-11 Score=109.84 Aligned_cols=114 Identities=17% Similarity=0.214 Sum_probs=76.8
Q ss_pred CCCCCcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhh-cccCCce-EEecC
Q 022407 1 MEEKMKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMG-TDAPRRL-RCTSN 78 (297)
Q Consensus 1 M~~~~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~i-~~~~~ 78 (297)
|++ .+||+|||+|.||..+|..|+++|++|++||+++++++.+. +.+.+.-... .....++ ..+++
T Consensus 1 mm~-~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~ 68 (359)
T 1bg6_A 1 MIE-SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQ-----------DRGAIIAEGPGLAGTAHPDLLTSD 68 (359)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HHTSEEEESSSCCEEECCSEEESC
T ss_pred CCC-cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH-----------hcCCeEEeccccccccccceecCC
Confidence 433 36999999999999999999999999999999998877652 2211100000 0001122 34566
Q ss_pred ccc-ccCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCC-CccHHHH
Q 022407 79 LKD-LHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTS-SISITRL 128 (297)
Q Consensus 79 ~~~-~~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts-~~~~~~l 128 (297)
+++ ++++|+||.|+|.... ..++.++.+.++++++|++..+ +....++
T Consensus 69 ~~~~~~~~D~vi~~v~~~~~--~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~ 118 (359)
T 1bg6_A 69 IGLAVKDADVILIVVPAIHH--ASIAANIASYISEGQLIILNPGATGGALEF 118 (359)
T ss_dssp HHHHHTTCSEEEECSCGGGH--HHHHHHHGGGCCTTCEEEESSCCSSHHHHH
T ss_pred HHHHHhcCCEEEEeCCchHH--HHHHHHHHHhCCCCCEEEEcCCCchHHHHH
Confidence 666 7899999999998764 5778888888888887665533 4343333
No 97
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=99.32 E-value=5.6e-12 Score=109.54 Aligned_cols=118 Identities=16% Similarity=0.218 Sum_probs=81.7
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcccc
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGL--DVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDL 82 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 82 (297)
++||+|||+|.||.++|..++..|+ +|.++|++++....+.+.. + . ...+++.++|++++
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~-~-----~------------~~~~i~~t~d~~~l 75 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLE-I-----F------------NLPNVEISKDLSAS 75 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHH-H-----H------------TCTTEEEESCGGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHh-h-----h------------cCCCeEEeCCHHHH
Confidence 4799999999999999999999999 9999999986222221111 0 0 01256777888889
Q ss_pred cCCcEEEEec-------------ccCHHHHHHHHHHHHhhccCCeEE--eecCCCccHHHHhhhcCC-CCeEEEe
Q 022407 83 HSADIIVEAI-------------VESEDVKKKLFSELDKITKASAIL--ASNTSSISITRLASATSR-PCQVIGM 141 (297)
Q Consensus 83 ~~aD~Vi~~v-------------~e~~~~k~~~~~~l~~~~~~~~ii--~s~ts~~~~~~l~~~~~~-~~~~~g~ 141 (297)
++||+||+++ .++..++++++.++.+++ +++++ +||++.+-...+.+.... +.|++|+
T Consensus 76 ~~aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~sNP~~~~t~~~~~~~~~p~~rviG~ 149 (303)
T 2i6t_A 76 AHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLVASQPVEIMTYVTWKLSTFPANRVIGI 149 (303)
T ss_dssp TTCSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEECSSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEcCChHHHHHHHHHHhcCCCHHHeeCC
Confidence 9999999997 888889999999999998 55554 466444333333333222 3566665
No 98
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=99.31 E-value=3.3e-11 Score=105.77 Aligned_cols=141 Identities=21% Similarity=0.320 Sum_probs=91.0
Q ss_pred cEEEEECCChhHHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccccc
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGL--DVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLH 83 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 83 (297)
+||+|||+|.||.++|..|+.+|+ +|+++|+++++++.....+.+.+. .. ...++.. ++.++++
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~----~~---------~~~~i~~-~d~~~~~ 66 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTP----FT---------RRANIYA-GDYADLK 66 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGG----GS---------CCCEEEE-CCGGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhh----hc---------CCcEEEe-CCHHHhC
Confidence 489999999999999999999999 999999999887765433332211 00 1123444 3566789
Q ss_pred CCcEEEEecccCH--------------HHHHHHHHHHHhhccCCeEEeecCCCccH-HHHh-hhcC-CCCeEEEeecCCC
Q 022407 84 SADIIVEAIVESE--------------DVKKKLFSELDKITKASAILASNTSSISI-TRLA-SATS-RPCQVIGMHFMNP 146 (297)
Q Consensus 84 ~aD~Vi~~v~e~~--------------~~k~~~~~~l~~~~~~~~ii~s~ts~~~~-~~l~-~~~~-~~~~~~g~h~~~p 146 (297)
+||+||++++... .+++.+++.+.++++ +++++..|.+... +.+. +... .+.|++|+
T Consensus 67 ~aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~-~~~ii~~tNp~~~~~~~~~~~~~~~~~rviG~----- 140 (319)
T 1a5z_A 67 GSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAP-DSIVIVVTNPVDVLTYFFLKESGMDPRKVFGS----- 140 (319)
T ss_dssp TCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEECSSSHHHHHHHHHHHHTCCTTTEEEC-----
T ss_pred CCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CeEEEEeCCcHHHHHHHHHHHhCCChhhEEee-----
Confidence 9999999998532 356788888988875 5544323333333 3333 2222 34556554
Q ss_pred CCCCcceeEecCCCChHHHHHHHHHHHHHhCCe
Q 022407 147 PPLMKLVEVIRGADTSDETFRATKALAERFGKT 179 (297)
Q Consensus 147 ~~~~~~vev~~~~~~~~~~~~~~~~l~~~lG~~ 179 (297)
.|..+.......+.+.+|..
T Consensus 141 -------------~t~ld~~r~~~~la~~lgv~ 160 (319)
T 1a5z_A 141 -------------GTVLDTARLRTLIAQHCGFS 160 (319)
T ss_dssp -------------TTHHHHHHHHHHHHHHHTCC
T ss_pred -------------CccHHHHHHHHHHHHHhCcC
Confidence 35555555555566677754
No 99
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=99.30 E-value=1.4e-11 Score=111.42 Aligned_cols=153 Identities=15% Similarity=0.163 Sum_probs=108.1
Q ss_pred cEEEEECCChhHHHHHHHHHHC------CCcEEEEeCCHH-HHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMD------GLDVWLVDTDPD-ALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSN 78 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~------G~~V~~~d~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 78 (297)
++|+|||+|.||.++|..|.++ |++|++.+++.+ ..+.+ .+.|.... . ....+
T Consensus 55 KkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A-----------~e~G~~v~-------d--~ta~s 114 (525)
T 3fr7_A 55 KQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEA-----------RAAGFTEE-------S--GTLGD 114 (525)
T ss_dssp SEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHH-----------HHTTCCTT-------T--TCEEE
T ss_pred CEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHH-----------HHCCCEEe-------c--CCCCC
Confidence 7999999999999999999999 999998776543 23332 34453210 0 01134
Q ss_pred ccc-ccCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHHHHhh---hcCCCCeEEEeecCCCCCC-----
Q 022407 79 LKD-LHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLAS---ATSRPCQVIGMHFMNPPPL----- 149 (297)
Q Consensus 79 ~~~-~~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~~l~~---~~~~~~~~~g~h~~~p~~~----- 149 (297)
.++ +++||+||.++|.... ..++.++.+.++++++| +-..++.+..+.+ .++....++.++|..|.+.
T Consensus 115 ~aEAa~~ADVVILaVP~~~~--~eVl~eI~p~LK~GaIL-s~AaGf~I~~le~~~i~~p~dv~VVrVmPNtPg~~VR~~y 191 (525)
T 3fr7_A 115 IWETVSGSDLVLLLISDAAQ--ADNYEKIFSHMKPNSIL-GLSHGFLLGHLQSAGLDFPKNISVIAVCPKGMGPSVRRLY 191 (525)
T ss_dssp HHHHHHHCSEEEECSCHHHH--HHHHHHHHHHSCTTCEE-EESSSHHHHHHHHTTCCCCTTSEEEEEEESSCHHHHHHHH
T ss_pred HHHHHhcCCEEEECCChHHH--HHHHHHHHHhcCCCCeE-EEeCCCCHHHHhhhcccCCCCCcEEEEecCCCchhHHHHH
Confidence 444 8899999999997554 35788899999999985 5778888877664 3444468999999888764
Q ss_pred --------Ccce-eEecCCCChHHHHHHHHHHHHHhCCeEE
Q 022407 150 --------MKLV-EVIRGADTSDETFRATKALAERFGKTVV 181 (297)
Q Consensus 150 --------~~~v-ev~~~~~~~~~~~~~~~~l~~~lG~~~v 181 (297)
.+.. -+..+...+.+..+.+..++..+|...+
T Consensus 192 ~~G~~~~g~Gv~~liAv~qd~tgea~e~alala~aiG~~~v 232 (525)
T 3fr7_A 192 VQGKEINGAGINSSFAVHQDVDGRATDVALGWSVALGSPFT 232 (525)
T ss_dssp HHHTTSTTCSCCEEEEEEECSSSCHHHHHHHHHHHTTCSEE
T ss_pred hcccccccCCccEEEEcCCCCCHHHHHHHHHHHHHCCCCee
Confidence 1121 2333334566789999999999999743
No 100
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=99.29 E-value=2.3e-11 Score=106.26 Aligned_cols=99 Identities=20% Similarity=0.266 Sum_probs=72.9
Q ss_pred cEEEEECCChhHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcccccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGL-DVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 84 (297)
+||+|||+|.||.++|..|+..|+ +|.++|+++++++.....+.+... ......+++.+++++++++
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~------------~~~~~~~i~~t~d~~a~~~ 70 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASP------------IEGFDVRVTGTNNYADTAN 70 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHH------------HHTCCCCEEEESCGGGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHh------------hcCCCeEEEECCCHHHHCC
Confidence 589999999999999999999997 999999998877643222221110 0112345677788877999
Q ss_pred CcEEEEec--------------ccCHHHHHHHHHHHHhhccCCeEEe
Q 022407 85 ADIIVEAI--------------VESEDVKKKLFSELDKITKASAILA 117 (297)
Q Consensus 85 aD~Vi~~v--------------~e~~~~k~~~~~~l~~~~~~~~ii~ 117 (297)
||+||+++ .++..+++++++.+.+++ ++++++
T Consensus 71 aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi 116 (309)
T 1ur5_A 71 SDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLS-PNAVII 116 (309)
T ss_dssp CSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGC-TTCEEE
T ss_pred CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEE
Confidence 99999997 333466778888899887 565543
No 101
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=99.24 E-value=7.6e-11 Score=102.73 Aligned_cols=120 Identities=23% Similarity=0.328 Sum_probs=78.2
Q ss_pred cEEEEECCChhHHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccccc
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGL--DVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLH 83 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 83 (297)
+||+|||+|.||.++|..|+..|+ +|+++|+++++++..... ...+. + . ....+++. ++.++++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~--------l~~~~--~--~-~~~~~i~~-~~~~a~~ 66 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAED--------IAHAA--P--V-SHGTRVWH-GGHSELA 66 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHH--------HTTSC--C--T-TSCCEEEE-ECGGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHh--------hhhhh--h--h-cCCeEEEE-CCHHHhC
Confidence 489999999999999999999999 999999998766532111 11111 0 0 01123443 5667799
Q ss_pred CCcEEEEec--cc------------CHHHHHHHHHHHHhhccCCeEE--eecCCCccHHHHhhhcCCCCeEEEe
Q 022407 84 SADIIVEAI--VE------------SEDVKKKLFSELDKITKASAIL--ASNTSSISITRLASATSRPCQVIGM 141 (297)
Q Consensus 84 ~aD~Vi~~v--~e------------~~~~k~~~~~~l~~~~~~~~ii--~s~ts~~~~~~l~~~~~~~~~~~g~ 141 (297)
+||+||+++ |. +..+++++++++.+++ +++++ +||++.+....+.+.. .+.|++|+
T Consensus 67 ~aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~~~vi~~tNP~~~~~~~~~~~~-~~~rviG~ 138 (304)
T 2v6b_A 67 DAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAA-PDAVLLVTSNPVDLLTDLATQLA-PGQPVIGS 138 (304)
T ss_dssp TCSEEEECC------------CHHHHHHHHHHHHHHHHHHC-SSSEEEECSSSHHHHHHHHHHHS-CSSCEEEC
T ss_pred CCCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhC-CCeEEEEecCchHHHHHHHHHhC-ChhcEEeC
Confidence 999999998 32 3346788888899986 55544 3554444334444443 45566554
No 102
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=99.21 E-value=1.6e-10 Score=100.81 Aligned_cols=110 Identities=23% Similarity=0.244 Sum_probs=73.8
Q ss_pred CCCCCcEEEEECCChhHHHHHHHHHHCCC-cEEEEeCC--HHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEec
Q 022407 1 MEEKMKVMGVVGSGQMGSGIAQLGVMDGL-DVWLVDTD--PDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTS 77 (297)
Q Consensus 1 M~~~~~~V~iiG~G~mG~~iA~~l~~~G~-~V~~~d~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 77 (297)
|....+||+|||+|.||.++|..++..|+ +|+++|++ +++++.....+.+... ......+++.++
T Consensus 4 m~~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~------------~~~~~~~i~~t~ 71 (315)
T 3tl2_A 4 MTIKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASP------------VQGFDANIIGTS 71 (315)
T ss_dssp CCCCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHH------------HHTCCCCEEEES
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhh------------hccCCCEEEEcC
Confidence 54456799999999999999999999999 99999999 5554433222222210 111234567778
Q ss_pred CcccccCCcEEEEeccc--------------CHHHHHHHHHHHHhhccCCeEEeecCCCc
Q 022407 78 NLKDLHSADIIVEAIVE--------------SEDVKKKLFSELDKITKASAILASNTSSI 123 (297)
Q Consensus 78 ~~~~~~~aD~Vi~~v~e--------------~~~~k~~~~~~l~~~~~~~~ii~s~ts~~ 123 (297)
+++++++||+||++... +..+.+.+...+.++++ +++++.-|...
T Consensus 72 d~~a~~~aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p-~a~vlvvsNPv 130 (315)
T 3tl2_A 72 DYADTADSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSP-NAIIVVLTNPV 130 (315)
T ss_dssp CGGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEECCSSH
T ss_pred CHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEECCChH
Confidence 88889999999998721 12244556666778775 55444344433
No 103
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=99.20 E-value=2.3e-11 Score=107.81 Aligned_cols=117 Identities=17% Similarity=0.193 Sum_probs=82.6
Q ss_pred cEEEEECCChhHHHHHHHHH-HCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-cc
Q 022407 6 KVMGVVGSGQMGSGIAQLGV-MDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LH 83 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~-~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~ 83 (297)
++|+|||+|.||..+|..+. ..|++|.+||++++..+.. .+.|. ...+++++ ++
T Consensus 164 ~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~-----------~~~g~-------------~~~~~l~ell~ 219 (348)
T 2w2k_A 164 HVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETE-----------KALGA-------------ERVDSLEELAR 219 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHH-----------HHHTC-------------EECSSHHHHHH
T ss_pred CEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhH-----------hhcCc-------------EEeCCHHHHhc
Confidence 68999999999999999999 9999999999987654432 11121 34446665 78
Q ss_pred CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCC--ccHHHHhhhcCCC-CeEEEeecCCC
Q 022407 84 SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSS--ISITRLASATSRP-CQVIGMHFMNP 146 (297)
Q Consensus 84 ~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~--~~~~~l~~~~~~~-~~~~g~h~~~p 146 (297)
+||+|+.++|...+.+..+.+++.+.++++++++..+++ ...+.+.+.+... ....++++|.+
T Consensus 220 ~aDvVil~vp~~~~t~~li~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~ 285 (348)
T 2w2k_A 220 RSDCVSVSVPYMKLTHHLIDEAFFAAMKPGSRIVNTARGPVISQDALIAALKSGKLLSAGLDVHEF 285 (348)
T ss_dssp HCSEEEECCCCSGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESSCTT
T ss_pred cCCEEEEeCCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHhCCceEEEeccCCC
Confidence 999999999987765444434555678889888743333 2335677766542 23367888874
No 104
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=99.18 E-value=2.2e-11 Score=107.31 Aligned_cols=117 Identities=16% Similarity=0.196 Sum_probs=81.0
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|+|||+|.||..+|..+...|++|++||+++++.+.. .+.| +... ++++ +++
T Consensus 156 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~-----------~~~g-------------~~~~-~l~e~l~~ 210 (330)
T 2gcg_A 156 STVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEA-----------AEFQ-------------AEFV-STPELAAQ 210 (330)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHH-----------HTTT-------------CEEC-CHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHH-----------HhcC-------------ceeC-CHHHHHhh
Confidence 689999999999999999999999999999987644332 1112 2333 5655 789
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCC--ccHHHHhhhcCC-CCeEEEeecCCCC
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSS--ISITRLASATSR-PCQVIGMHFMNPP 147 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~--~~~~~l~~~~~~-~~~~~g~h~~~p~ 147 (297)
||+|+.++|...+.+..+.+++.+.++++++++..+++ ...+.+.+.+.. .....++++|.+.
T Consensus 211 aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~e 276 (330)
T 2gcg_A 211 SDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPE 276 (330)
T ss_dssp CSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSS
T ss_pred CCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHcCCccEEEeCCCCCC
Confidence 99999999987654433334555677888888744333 233566665532 2345778887754
No 105
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=99.18 E-value=2.4e-10 Score=99.89 Aligned_cols=121 Identities=15% Similarity=0.274 Sum_probs=78.8
Q ss_pred cEEEEECCChhHHHHHHHHHHCC--CcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEE-ecCcccc
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDG--LDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRC-TSNLKDL 82 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G--~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~-~~~~~~~ 82 (297)
+||+|||+|.||.++|..|+.+| ++|++||+++++++.....+.+... . ....+.. +++++++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~-------~-------~~~~~~~~~~d~~~~ 67 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMA-------N-------LEAHGNIVINDWAAL 67 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGG-------G-------SSSCCEEEESCGGGG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhh-------h-------cCCCeEEEeCCHHHh
Confidence 58999999999999999999999 7999999999887665433221110 0 0011233 4667669
Q ss_pred cCCcEEEEecccCH------------------HHHHHHHHHHHhhccCCeEEeecCCCccH-HHHhhhc-C-CCCeEEEe
Q 022407 83 HSADIIVEAIVESE------------------DVKKKLFSELDKITKASAILASNTSSISI-TRLASAT-S-RPCQVIGM 141 (297)
Q Consensus 83 ~~aD~Vi~~v~e~~------------------~~k~~~~~~l~~~~~~~~ii~s~ts~~~~-~~l~~~~-~-~~~~~~g~ 141 (297)
++||+||.+++... .+.+++++++.++++ +++++..|.+..+ ..+.... . .+.+++|+
T Consensus 68 ~~aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~-~~~ii~~tNp~~~~~~~~~~~~~~~~~rvig~ 146 (309)
T 1hyh_A 68 ADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGF-HGVLVVISNPVDVITALFQHVTGFPAHKVIGT 146 (309)
T ss_dssp TTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTC-CSEEEECSSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CCCCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC-CcEEEEEcCcHHHHHHHHHHhcCCCHHHEeec
Confidence 99999999998644 235677888888775 5544434444433 2233221 1 23466665
No 106
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=99.17 E-value=5.6e-11 Score=107.76 Aligned_cols=106 Identities=17% Similarity=0.306 Sum_probs=76.2
Q ss_pred cEEEEECCChhHHHHHHHHHH-CCCcEEEEe---CCHHHHHHHHHHHHHHHHHHHHcCCCC-h-----hhhcccCCceE-
Q 022407 6 KVMGVVGSGQMGSGIAQLGVM-DGLDVWLVD---TDPDALVRATKSISSSIQKFVSKGQLS-Q-----AMGTDAPRRLR- 74 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~-~G~~V~~~d---~~~~~~~~~~~~~~~~~~~~~~~g~~~-~-----~~~~~~~~~i~- 74 (297)
+||+|||+|.||..+|..|++ +|++|++|| +++++++.+ .+.+.+. . .+......++.
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~-----------~~~~g~~~~~~~~~~~~~~~~~~~~~ 71 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKA-----------LGADELTVIVNEKDGTQTEVKSRPKV 71 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHH-----------HTTSCEEEEEECSSSCEEEEEECCSE
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHH-----------HhhccceeeeecCCCccceeeccceE
Confidence 689999999999999999998 599999999 777766553 2221100 0 00001112333
Q ss_pred EecCccc-ccCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCcc
Q 022407 75 CTSNLKD-LHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSIS 124 (297)
Q Consensus 75 ~~~~~~~-~~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~ 124 (297)
+++++++ +++||+||+|+|... ...+++++.++++++++|++++++..
T Consensus 72 ~~~~~~~a~~~aD~Vilav~~~~--~~~v~~~l~~~l~~~~ivv~~~~~~G 120 (404)
T 3c7a_A 72 ITKDPEIAISGADVVILTVPAFA--HEGYFQAMAPYVQDSALIVGLPSQAG 120 (404)
T ss_dssp EESCHHHHHTTCSEEEECSCGGG--HHHHHHHHTTTCCTTCEEEETTCCTT
T ss_pred EeCCHHHHhCCCCEEEEeCchHH--HHHHHHHHHhhCCCCcEEEEcCCCcc
Confidence 5667765 789999999999766 57888999999988999988655554
No 107
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=99.15 E-value=2.2e-10 Score=99.99 Aligned_cols=115 Identities=16% Similarity=0.148 Sum_probs=76.0
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcccccCC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHSA 85 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~a 85 (297)
+||+|||+|.||+.+|..|+ +|++|++|+|++++++.+ .+.|.............+.. +.+....+
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~~~~~l-----------~~~G~~~~~~~~~~~~~~~~--~~~~~~~~ 68 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQEQAAAI-----------QSEGIRLYKGGEEFRADCSA--DTSINSDF 68 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHH-----------HHHCEEEEETTEEEEECCEE--ESSCCSCC
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCHHHHHHH-----------HhCCceEecCCCeecccccc--cccccCCC
Confidence 68999999999999999999 999999999998877665 22332100000000011111 12236789
Q ss_pred cEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHH-HHhhhcCCCCeEE
Q 022407 86 DIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISIT-RLASATSRPCQVI 139 (297)
Q Consensus 86 D~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~-~l~~~~~~~~~~~ 139 (297)
|+||.|++... ...++..+.+. ++++ |++...++... .+.+.++. .+++
T Consensus 69 D~vilavK~~~--~~~~l~~l~~~-~~~~-ivs~~nGi~~~e~l~~~~~~-~~vl 118 (307)
T 3ego_A 69 DLLVVTVKQHQ--LQSVFSSLERI-GKTN-ILFLQNGMGHIHDLKDWHVG-HSIY 118 (307)
T ss_dssp SEEEECCCGGG--HHHHHHHTTSS-CCCE-EEECCSSSHHHHHHHTCCCS-CEEE
T ss_pred CEEEEEeCHHH--HHHHHHHhhcC-CCCe-EEEecCCccHHHHHHHhCCC-CcEE
Confidence 99999997543 45666777665 5677 78889999885 55555443 3443
No 108
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=99.14 E-value=4.7e-10 Score=97.99 Aligned_cols=105 Identities=15% Similarity=0.138 Sum_probs=76.1
Q ss_pred CCcEEEEECCChhHHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc
Q 022407 4 KMKVMGVVGSGQMGSGIAQLGVMDGL--DVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD 81 (297)
Q Consensus 4 ~~~~V~iiG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 81 (297)
..+||+|||+|.||.++|..++..|+ +|.++|+++++++.....+.+... . ....++..++++++
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~----~---------~~~~~i~~t~d~~~ 86 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSL----F---------LHTAKIVSGKDYSV 86 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGG----G---------SCCSEEEEESSSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhh----c---------ccCCeEEEcCCHHH
Confidence 35799999999999999999999997 999999999877654333333210 0 12345667788989
Q ss_pred ccCCcEEEEec--------------ccCHHHHHHHHHHHHhhccCCeEEeecCCC
Q 022407 82 LHSADIIVEAI--------------VESEDVKKKLFSELDKITKASAILASNTSS 122 (297)
Q Consensus 82 ~~~aD~Vi~~v--------------~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~ 122 (297)
+++||+||.+. ..+..+++++..++.++++ +++++.-|..
T Consensus 87 ~~daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P-~a~ilvvtNP 140 (330)
T 3ldh_A 87 SAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSP-DCLKELHPEL 140 (330)
T ss_dssp CSSCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCT-TCEEEECSSS
T ss_pred hCCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCC-CceEEeCCCc
Confidence 99999999874 3344567788888999864 5544433433
No 109
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=99.13 E-value=5.7e-10 Score=97.47 Aligned_cols=99 Identities=15% Similarity=0.150 Sum_probs=69.0
Q ss_pred cEEEEECCChhHHHHHHHHHHC--CCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccccc
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMD--GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLH 83 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~--G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 83 (297)
+||+|||+|.||.++|..|+.. |++|++||+++++++.....+.+.... .....++..++++++++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~------------~~~~~~i~~t~d~~~l~ 68 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPV------------GLFDTKVTGSNDYADTA 68 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHH------------HTCCCEEEEESCGGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhc------------ccCCcEEEECCCHHHHC
Confidence 4899999999999999999985 899999999998777432211111100 01123566778888899
Q ss_pred CCcEEEEecccC--------------HHHHHHHHHHHHhhccCCeEE
Q 022407 84 SADIIVEAIVES--------------EDVKKKLFSELDKITKASAIL 116 (297)
Q Consensus 84 ~aD~Vi~~v~e~--------------~~~k~~~~~~l~~~~~~~~ii 116 (297)
+||+||++++.. ..+.+.+.+.+.+++++..++
T Consensus 69 ~aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~vi 115 (310)
T 1guz_A 69 NSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIII 115 (310)
T ss_dssp TCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEE
T ss_pred CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEE
Confidence 999999999642 133456667788886544433
No 110
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=99.12 E-value=2.6e-11 Score=105.27 Aligned_cols=166 Identities=11% Similarity=0.120 Sum_probs=105.7
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcccc-cC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDL-HS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~-~~ 84 (297)
+||+|||+|.||..+|..|+++|++|++|+|+++.++.. ...|. ....+. .++.+.+ .+
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~~~~~~~-----------~~~g~--------~~~~~~-~~~~~~~~~~ 62 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYY-----------TVPHA--------PAQDIV-VKGYEDVTNT 62 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSCEEEEEE-----------SSTTS--------CCEEEE-EEEGGGCCSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEeccCcEEEE-----------ecCCe--------ecccee-cCchHhcCCC
Confidence 589999999999999999999999999999996543210 01111 011121 2233444 78
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHHHHhhhcCCCCeEEEe-e-----cCCCCCCC-cceeEec
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGM-H-----FMNPPPLM-KLVEVIR 157 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~~l~~~~~~~~~~~g~-h-----~~~p~~~~-~~vev~~ 157 (297)
+|+||.|++... ...+++++.+.++++++|++...++...+. ++. .++++. . ...|-... ....+..
T Consensus 63 ~D~vilavk~~~--~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~---~~~-~~v~~g~~~~~a~~~~pg~v~~~~~~~~~ 136 (294)
T 3g17_A 63 FDVIIIAVKTHQ--LDAVIPHLTYLAHEDTLIILAQNGYGQLEH---IPF-KNVCQAVVYISGQKKGDVVTHFRDYQLRI 136 (294)
T ss_dssp EEEEEECSCGGG--HHHHGGGHHHHEEEEEEEEECCSSCCCGGG---CCC-SCEEECEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCEEEEeCCccC--HHHHHHHHHHhhCCCCEEEEeccCcccHhh---CCC-CcEEEEEEEEEEEEcCCCEEEECCCEEec
Confidence 999999998653 557888888889889999989999887544 332 233322 1 11221110 0011211
Q ss_pred CCCChHHHHHHHHHHHHHhCCeEEEeccchhhhHHHHHHHH-HH
Q 022407 158 GADTSDETFRATKALAERFGKTVVCSQDYAGFIVNRILMPM-IN 200 (297)
Q Consensus 158 ~~~~~~~~~~~~~~l~~~lG~~~v~~~d~~g~i~nri~~~~-~~ 200 (297)
.+.+..+.+.++|..-|.+..+..|..+..+..++... +|
T Consensus 137 ---~~~~~~~~l~~~l~~~~~~~~~~~di~~~~w~Kl~~N~~in 177 (294)
T 3g17_A 137 ---QDNALTRQFRDLVQDSQIDIVLEANIQQAIWYKLLVNLGIN 177 (294)
T ss_dssp ---ECSHHHHHHHHHTTTSSCEEEEESSHHHHHHHHHHHHHHHH
T ss_pred ---CccHHHHHHHHHHHhCCCceEEChHHHHHHHHHHHHHHHHH
Confidence 13456677788888888888888887776555555433 44
No 111
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=99.11 E-value=6.7e-11 Score=104.39 Aligned_cols=115 Identities=19% Similarity=0.241 Sum_probs=80.1
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|+|||+|.||..+|..+...|++|++||++++. +.. .+.|. .. .++++ +++
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~-----------~~~g~-------------~~-~~l~~~l~~ 204 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKE-EVE-----------RELNA-------------EF-KPLEDLLRE 204 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHH-----------HHHCC-------------EE-CCHHHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcch-hhH-----------hhcCc-------------cc-CCHHHHHhh
Confidence 68999999999999999999999999999999875 322 11221 23 35655 789
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccH--HHHhhhcCC-CCeEEEeecCCC
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISI--TRLASATSR-PCQVIGMHFMNP 146 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~--~~l~~~~~~-~~~~~g~h~~~p 146 (297)
||+|+.++|...+.+..+.+++.+.++++++++..+.+..+ ..+.+.+.. +-...+++++++
T Consensus 205 aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~ 269 (334)
T 2dbq_A 205 SDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEE 269 (334)
T ss_dssp CSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSS
T ss_pred CCEEEECCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCeeEEEecCCCC
Confidence 99999999987754433334555677888888744433322 356665532 233477888873
No 112
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=99.11 E-value=2.1e-11 Score=107.25 Aligned_cols=111 Identities=14% Similarity=0.181 Sum_probs=79.3
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|+|||+|.||..+|..+...|++|++||++++..+ | .....++++ +++
T Consensus 165 ~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~~~~----------------g-------------~~~~~~l~ell~~ 215 (333)
T 3ba1_A 165 KRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKKPNT----------------N-------------YTYYGSVVELASN 215 (333)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCCTTC----------------C-------------SEEESCHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCchhcc----------------C-------------ceecCCHHHHHhc
Confidence 6899999999999999999999999999999865310 1 134456666 789
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccH--HHHhhhcCC-CCeEEEeecCC
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISI--TRLASATSR-PCQVIGMHFMN 145 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~--~~l~~~~~~-~~~~~g~h~~~ 145 (297)
||+|+.++|...+.+..+-++..+.++++++++..+.+..+ ..+.+.+.. ..+..++++|.
T Consensus 216 aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~srG~~vd~~aL~~aL~~g~i~ga~lDv~~ 279 (333)
T 3ba1_A 216 SDILVVACPLTPETTHIINREVIDALGPKGVLINIGRGPHVDEPELVSALVEGRLGGAGLDVFE 279 (333)
T ss_dssp CSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEECSCGGGBCHHHHHHHHHHTSSCEEEESCCT
T ss_pred CCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHcCCCeEEEEecCC
Confidence 99999999987654333323444567888888744444332 566666643 34567888887
No 113
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=99.11 E-value=4.4e-10 Score=97.95 Aligned_cols=96 Identities=18% Similarity=0.368 Sum_probs=70.2
Q ss_pred EEEEECCChhHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcccccCC
Q 022407 7 VMGVVGSGQMGSGIAQLGVMDGL-DVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHSA 85 (297)
Q Consensus 7 ~V~iiG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~a 85 (297)
||+|||+|.||.++|..++..|+ +|.++|+++++++.....+.+.... .+ ...+++.+++++++++|
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~---~~---------~~~~i~~t~d~~a~~~a 68 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAE---LG---------VDIRISGSNSYEDMRGS 68 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHH---HT---------CCCCEEEESCGGGGTTC
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhh---cC---------CCeEEEECCCHHHhCCC
Confidence 69999999999999999998888 7999999988776533332222110 01 12346666788789999
Q ss_pred cEEEEec--------------ccCHHHHHHHHHHHHhhccCCeE
Q 022407 86 DIIVEAI--------------VESEDVKKKLFSELDKITKASAI 115 (297)
Q Consensus 86 D~Vi~~v--------------~e~~~~k~~~~~~l~~~~~~~~i 115 (297)
|+||++. ..+..+++++.+++.+++ ++++
T Consensus 69 D~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~ 111 (308)
T 2d4a_B 69 DIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYA-KDAI 111 (308)
T ss_dssp SEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHC-TTCE
T ss_pred CEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHC-CCeE
Confidence 9999993 445566888888899987 4553
No 114
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=99.10 E-value=7.4e-11 Score=103.97 Aligned_cols=112 Identities=17% Similarity=0.237 Sum_probs=77.8
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|+|||+|.||..+|..+...|++|++||++++. +.. .+.| +... ++++ +++
T Consensus 147 ~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~-----------~~~g-------------~~~~-~l~e~l~~ 200 (333)
T 2d0i_A 147 KKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKV-NVE-----------KELK-------------ARYM-DIDELLEK 200 (333)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCH-HHH-----------HHHT-------------EEEC-CHHHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcch-hhh-----------hhcC-------------ceec-CHHHHHhh
Confidence 68999999999999999999999999999999875 222 1112 1233 5655 789
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccH---HHHhhhcCC-CCeEEEeecCC
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISI---TRLASATSR-PCQVIGMHFMN 145 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~---~~l~~~~~~-~~~~~g~h~~~ 145 (297)
||+|+.++|...+.+..+.+++.+.++++ +++ |++.-.+ ..+.+.+.. .....+++++.
T Consensus 201 aDiVil~vp~~~~t~~~i~~~~~~~mk~g-ili-n~srg~~vd~~aL~~aL~~~~i~gaglDv~~ 263 (333)
T 2d0i_A 201 SDIVILALPLTRDTYHIINEERVKKLEGK-YLV-NIGRGALVDEKAVTEAIKQGKLKGYATDVFE 263 (333)
T ss_dssp CSEEEECCCCCTTTTTSBCHHHHHHTBTC-EEE-ECSCGGGBCHHHHHHHHHTTCBCEEEESCCS
T ss_pred CCEEEEcCCCChHHHHHhCHHHHhhCCCC-EEE-ECCCCcccCHHHHHHHHHcCCceEEEecCCC
Confidence 99999999988554433333445567778 665 4443332 345666543 24558889887
No 115
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=99.09 E-value=1.1e-09 Score=95.98 Aligned_cols=107 Identities=19% Similarity=0.273 Sum_probs=74.3
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcccc
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGL--DVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDL 82 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 82 (297)
++||+|||+|.||..+|..|+.+|+ +|+++|+++++++.....+. .+.. .. ...++..+++.+++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~--------~~~~----~~-~~~~v~~~~~~~~~ 73 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQ--------HGSS----FY-PTVSIDGSDDPEIC 73 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHH--------HTGG----GS-TTCEEEEESCGGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHH--------hhhh----hc-CCeEEEeCCCHHHh
Confidence 4799999999999999999999999 99999999876652111111 1110 00 01234455566778
Q ss_pred cCCcEEEEeccc--------------CHHHHHHHHHHHHhhccCCeEEeecCCCccH
Q 022407 83 HSADIIVEAIVE--------------SEDVKKKLFSELDKITKASAILASNTSSISI 125 (297)
Q Consensus 83 ~~aD~Vi~~v~e--------------~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~ 125 (297)
++||+||.++.. +..+.+.++.++.++ .++++|++.+.++..
T Consensus 74 ~~aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~~~Np~~~ 129 (319)
T 1lld_A 74 RDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYMLITNPVDI 129 (319)
T ss_dssp TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCSSHHH
T ss_pred CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEecCchHH
Confidence 999999999932 124555778888886 567777767777665
No 116
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=99.08 E-value=3.8e-10 Score=98.80 Aligned_cols=103 Identities=14% Similarity=0.230 Sum_probs=69.4
Q ss_pred CCC-CCcEEEEECCChhHHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEec
Q 022407 1 MEE-KMKVMGVVGSGQMGSGIAQLGVMDGL--DVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTS 77 (297)
Q Consensus 1 M~~-~~~~V~iiG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 77 (297)
|.. .++||+|||+|.||.++|..++..|. +|.++|+++++++.....+.+. .... ....+++ .+
T Consensus 1 m~~~~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~-------~~~~-----~~~~~i~-~~ 67 (316)
T 1ldn_A 1 MKNNGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHG-------KVFA-----PKPVDIW-HG 67 (316)
T ss_dssp CTTTTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHH-------TTSS-----SSCCEEE-EC
T ss_pred CCCCCCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHH-------hhhc-----CCCeEEE-cC
Confidence 643 45799999999999999999988775 8999999987555322222211 0000 0012233 34
Q ss_pred CcccccCCcEEEEecc--------------cCHHHHHHHHHHHHhhccCCeEE
Q 022407 78 NLKDLHSADIIVEAIV--------------ESEDVKKKLFSELDKITKASAIL 116 (297)
Q Consensus 78 ~~~~~~~aD~Vi~~v~--------------e~~~~k~~~~~~l~~~~~~~~ii 116 (297)
+.+++++||+||++.+ ++..+++++.+.+.+++++..++
T Consensus 68 ~~~al~~aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~i 120 (316)
T 1ldn_A 68 DYDDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFL 120 (316)
T ss_dssp CGGGTTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEE
T ss_pred cHHHhCCCCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEE
Confidence 5667999999999953 33467888888999987544333
No 117
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=99.08 E-value=7.2e-10 Score=96.96 Aligned_cols=105 Identities=20% Similarity=0.281 Sum_probs=71.1
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccccc
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGL-DVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLH 83 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 83 (297)
.+||+|||+|.||.++|..|+..|+ +|.++|+++++++.....+.+.... .....+++.++++++++
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~------------~~~~~~v~~t~d~~a~~ 72 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPI------------EGVDFKVRGTNDYKDLE 72 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHH------------HTCCCCEEEESCGGGGT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhh------------cCCCcEEEEcCCHHHHC
Confidence 4799999999999999999999998 9999999998765432222221110 00123455567788899
Q ss_pred CCcEEEEeccc--------------CHHHHHHHHHHHHhhccCCeEEeecCCC
Q 022407 84 SADIIVEAIVE--------------SEDVKKKLFSELDKITKASAILASNTSS 122 (297)
Q Consensus 84 ~aD~Vi~~v~e--------------~~~~k~~~~~~l~~~~~~~~ii~s~ts~ 122 (297)
+||+||.+... +..+.+.+...+.++++ +++++.-|..
T Consensus 73 ~aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p-~a~vivvtNP 124 (321)
T 3p7m_A 73 NSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCP-NAFVICITNP 124 (321)
T ss_dssp TCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEECCSS
T ss_pred CCCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCC-CcEEEEecCc
Confidence 99999998632 22345566667888874 5544433433
No 118
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=99.08 E-value=9.3e-10 Score=96.29 Aligned_cols=106 Identities=19% Similarity=0.270 Sum_probs=72.8
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccccc
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGL-DVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLH 83 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 83 (297)
.+||+|||+|.||.++|..|+..|+ +|+++|+++++++.....+.+.... . + ...++..++++++++
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~-~--~---------~~~~v~~t~d~~a~~ 74 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPV-D--G---------FDAKFTGANDYAAIE 74 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHH-H--T---------CCCCEEEESSGGGGT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhh-c--C---------CCCEEEEeCCHHHHC
Confidence 4699999999999999999999999 9999999998876443333332211 1 0 123456677888899
Q ss_pred CCcEEEEeccc--------------CHHHHHHHHHHHHhhccCCeEEeecCCCc
Q 022407 84 SADIIVEAIVE--------------SEDVKKKLFSELDKITKASAILASNTSSI 123 (297)
Q Consensus 84 ~aD~Vi~~v~e--------------~~~~k~~~~~~l~~~~~~~~ii~s~ts~~ 123 (297)
+||+||.+... +..+.+++...+.+++ ++++++.-|...
T Consensus 75 ~aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~iivvtNPv 127 (324)
T 3gvi_A 75 GADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYA-PEAFVICITNPL 127 (324)
T ss_dssp TCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSH
T ss_pred CCCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHC-CCeEEEecCCCc
Confidence 99999998631 1234455666677887 455544334333
No 119
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=99.01 E-value=1.1e-10 Score=100.60 Aligned_cols=111 Identities=14% Similarity=0.117 Sum_probs=78.4
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|+|||+|.||..+|..+...|++|.+||++++..+. ....+++++ +++
T Consensus 123 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-----------------------------~~~~~~l~ell~~ 173 (290)
T 3gvx_A 123 KALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV-----------------------------DVISESPADLFRQ 173 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTTC-----------------------------SEECSSHHHHHHH
T ss_pred chheeeccCchhHHHHHHHHhhCcEEEEEecccccccc-----------------------------ccccCChHHHhhc
Confidence 68999999999999999999999999999998653110 234556766 789
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCcc--HHHHhhhcC-CCCeEEEeecCC
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSIS--ITRLASATS-RPCQVIGMHFMN 145 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~--~~~l~~~~~-~~~~~~g~h~~~ 145 (297)
||+|+.++|...+.+.-+..+..+.++++++++..+.+-. ...+.+.+. ......++..|.
T Consensus 174 aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ga~lDV~~ 237 (290)
T 3gvx_A 174 SDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSKPDMIGFLKERSDVWYLSDVWW 237 (290)
T ss_dssp CSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCT
T ss_pred cCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhcccCCcchhhhhhhccceEEeecccc
Confidence 9999999997665443333556677888888874333322 356666653 233455666654
No 120
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=99.00 E-value=1.5e-09 Score=95.06 Aligned_cols=114 Identities=15% Similarity=0.175 Sum_probs=76.1
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeC-CHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-cc
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDT-DPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LH 83 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~ 83 (297)
++|+|||+|.||..+|..+...|++|++||+ +++.. .+ .+.|. ...+++++ ++
T Consensus 147 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~~-----------~~~g~-------------~~~~~l~ell~ 201 (320)
T 1gdh_A 147 KTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSS-DE-----------ASYQA-------------TFHDSLDSLLS 201 (320)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHH-HH-----------HHHTC-------------EECSSHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcChh-hh-----------hhcCc-------------EEcCCHHHHHh
Confidence 6899999999999999999999999999999 87652 22 12232 23445655 78
Q ss_pred CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCC--ccHHHHhhhcCCC-CeEEEeecC
Q 022407 84 SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSS--ISITRLASATSRP-CQVIGMHFM 144 (297)
Q Consensus 84 ~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~--~~~~~l~~~~~~~-~~~~g~h~~ 144 (297)
.||+|+.++|...+...-+-++..+.++++++++..+++ +....+.+.+... ..-.++.++
T Consensus 202 ~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~arg~~vd~~aL~~aL~~g~i~gA~lDv~ 265 (320)
T 1gdh_A 202 VSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLAYAGFDVF 265 (320)
T ss_dssp HCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCC
T ss_pred hCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCcEEEEeCC
Confidence 999999999976543322223455677888888754444 2334566655322 222345555
No 121
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=98.99 E-value=1.2e-09 Score=96.00 Aligned_cols=111 Identities=16% Similarity=0.186 Sum_probs=66.3
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|+|||+|.||..+|..+...|++|.+||++++.. .+ .....++++ ++.
T Consensus 172 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~----------------~~-------------~~~~~sl~ell~~ 222 (340)
T 4dgs_A 172 KRIGVLGLGQIGRALASRAEAFGMSVRYWNRSTLSG----------------VD-------------WIAHQSPVDLARD 222 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCTT----------------SC-------------CEECSSHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCcccc----------------cC-------------ceecCCHHHHHhc
Confidence 689999999999999999999999999999986520 01 134456666 789
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccH--HHHhhhcCCC-CeEEEeecCC
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISI--TRLASATSRP-CQVIGMHFMN 145 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~--~~l~~~~~~~-~~~~g~h~~~ 145 (297)
||+|+.++|...+.+.-+-++..+.++++++++..+.+-.+ ..+.+.+... ....++..|.
T Consensus 223 aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDVf~ 286 (340)
T 4dgs_A 223 SDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARGNVVDEDALIEALKSGTIAGAGLDVFV 286 (340)
T ss_dssp CSEEEECC----------CHHHHHHTTTTCEEEECSCC--------------CCSSEEEESCCS
T ss_pred CCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCceEEEeCCcC
Confidence 99999999977665544445666678888888744433222 4566666432 3345565554
No 122
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=98.97 E-value=4.3e-09 Score=90.89 Aligned_cols=106 Identities=17% Similarity=0.203 Sum_probs=69.8
Q ss_pred cEEEEECCChhHHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccccc
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGL--DVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLH 83 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 83 (297)
|||+|||+|.||.++|..|+..|+ +|.+||+++++++.....+.+.... .. ...+++.++|.++++
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~---~~---------~~~~i~~t~d~~a~~ 68 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAG---ID---------KYPKIVGGADYSLLK 68 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHT---TT---------CCCEEEEESCGGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhh---cC---------CCCEEEEeCCHHHhC
Confidence 489999999999999999999998 9999999998866332222222110 00 123466667777799
Q ss_pred CCcEEEEecccC--------------HHHHHHHHHHHHhhccCCeEEeecCCCcc
Q 022407 84 SADIIVEAIVES--------------EDVKKKLFSELDKITKASAILASNTSSIS 124 (297)
Q Consensus 84 ~aD~Vi~~v~e~--------------~~~k~~~~~~l~~~~~~~~ii~s~ts~~~ 124 (297)
+||+||.+...+ ..+.+.+...+.++++ +++++.-|....
T Consensus 69 ~aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p-~a~iivvsNPvd 122 (294)
T 1oju_A 69 GSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAP-ESKILVVTNPMD 122 (294)
T ss_dssp TCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTST-TCEEEECSSSHH
T ss_pred CCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCC-CeEEEEeCCcch
Confidence 999999986321 1233444555777754 555543444433
No 123
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=98.97 E-value=7.6e-09 Score=94.84 Aligned_cols=77 Identities=21% Similarity=0.258 Sum_probs=56.0
Q ss_pred CcEEEEECCChhH--HHHHHHHHHC----CCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecC
Q 022407 5 MKVMGVVGSGQMG--SGIAQLGVMD----GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSN 78 (297)
Q Consensus 5 ~~~V~iiG~G~mG--~~iA~~l~~~----G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 78 (297)
.+||+|||+|.|| .++|..|++. |++|++||+++++++........ +..... ...+++.++|
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~----~l~~~~--------~~~~I~~ttD 70 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKK----YVEEVG--------ADLKFEKTMN 70 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHH----HHHHTT--------CCCEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHH----HhccCC--------CCcEEEEECC
Confidence 3699999999985 5556677754 89999999999988775443322 222111 1356778888
Q ss_pred c-ccccCCcEEEEecc
Q 022407 79 L-KDLHSADIIVEAIV 93 (297)
Q Consensus 79 ~-~~~~~aD~Vi~~v~ 93 (297)
+ +++++||+||++++
T Consensus 71 ~~eal~dAD~VIiaag 86 (480)
T 1obb_A 71 LDDVIIDADFVINTAM 86 (480)
T ss_dssp HHHHHTTCSEEEECCC
T ss_pred HHHHhCCCCEEEECCC
Confidence 8 45999999999995
No 124
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=98.96 E-value=7.9e-09 Score=94.76 Aligned_cols=78 Identities=17% Similarity=0.188 Sum_probs=56.4
Q ss_pred CcEEEEECCChh-HHHHHHHHHHC-----CCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecC
Q 022407 5 MKVMGVVGSGQM-GSGIAQLGVMD-----GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSN 78 (297)
Q Consensus 5 ~~~V~iiG~G~m-G~~iA~~l~~~-----G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 78 (297)
.+||+|||+|.. |.++|..|+.. +++|.+||+++++++......+..++ ..+ ...+++.++|
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~---~~~---------~~~~I~~t~D 95 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIR---EKA---------PDIEFAATTD 95 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHH---HHC---------TTSEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhc---cCC---------CCCEEEEECC
Confidence 369999999998 66688888887 67999999999988775322221111 111 1245677788
Q ss_pred c-ccccCCcEEEEeccc
Q 022407 79 L-KDLHSADIIVEAIVE 94 (297)
Q Consensus 79 ~-~~~~~aD~Vi~~v~e 94 (297)
+ +++++||+||.+++.
T Consensus 96 ~~eal~~AD~VViaag~ 112 (472)
T 1u8x_X 96 PEEAFTDVDFVMAHIRV 112 (472)
T ss_dssp HHHHHSSCSEEEECCCT
T ss_pred HHHHHcCCCEEEEcCCC
Confidence 7 458999999999975
No 125
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=98.94 E-value=3.5e-09 Score=92.69 Aligned_cols=109 Identities=17% Similarity=0.291 Sum_probs=71.0
Q ss_pred CCCCCcEEEEECCChhHHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceE-Eec
Q 022407 1 MEEKMKVMGVVGSGQMGSGIAQLGVMDGL--DVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLR-CTS 77 (297)
Q Consensus 1 M~~~~~~V~iiG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~-~~~ 77 (297)
|.+..+||+|||+|.||.++|..|+..|+ +|.++|+++++++.....+.+.... ....++ .++
T Consensus 1 m~~~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~--------------~~~~v~i~~~ 66 (326)
T 3pqe_A 1 MNKHVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAF--------------APQPVKTSYG 66 (326)
T ss_dssp -CCSCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGG--------------SSSCCEEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhcccc--------------ccCCeEEEeC
Confidence 76667899999999999999999999997 8999999998776543333322100 001122 345
Q ss_pred CcccccCCcEEEEecccC--------------HHHHHHHHHHHHhhccCCeEEeecCCCcc
Q 022407 78 NLKDLHSADIIVEAIVES--------------EDVKKKLFSELDKITKASAILASNTSSIS 124 (297)
Q Consensus 78 ~~~~~~~aD~Vi~~v~e~--------------~~~k~~~~~~l~~~~~~~~ii~s~ts~~~ 124 (297)
+++++++||+||.+...+ ..+.+.+...+.++++ +++++.-|....
T Consensus 67 ~~~a~~~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p-~a~vlvvtNPvd 126 (326)
T 3pqe_A 67 TYEDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGF-DGIFLVATNPVD 126 (326)
T ss_dssp CGGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTC-CSEEEECSSSHH
T ss_pred cHHHhCCCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcC-CeEEEEcCChHH
Confidence 677799999999987321 1223445555777765 555543444333
No 126
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=98.94 E-value=5.1e-09 Score=95.24 Aligned_cols=77 Identities=23% Similarity=0.298 Sum_probs=56.5
Q ss_pred CCCCCcEEEEECCChh--HHHHHHHHHH----CCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceE
Q 022407 1 MEEKMKVMGVVGSGQM--GSGIAQLGVM----DGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLR 74 (297)
Q Consensus 1 M~~~~~~V~iiG~G~m--G~~iA~~l~~----~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~ 74 (297)
|..+.+||+|||+|.| |.+++..|+. .| +|++||+++++++..... .+ .+.. ...+++
T Consensus 1 m~m~~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~~-~~---------~l~~-----~~~~I~ 64 (450)
T 3fef_A 1 MSLDQIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEVI-GN---------HSGN-----GRWRYE 64 (450)
T ss_dssp --CCCEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHHH-HT---------TSTT-----SCEEEE
T ss_pred CCCCCCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHHH-HH---------HHhc-----cCCeEE
Confidence 5444479999999998 5789988886 67 999999999887765221 11 1110 345678
Q ss_pred EecCccc-ccCCcEEEEecc
Q 022407 75 CTSNLKD-LHSADIIVEAIV 93 (297)
Q Consensus 75 ~~~~~~~-~~~aD~Vi~~v~ 93 (297)
.++|+++ +++||+||++++
T Consensus 65 ~TtD~~eAl~dADfVI~air 84 (450)
T 3fef_A 65 AVSTLKKALSAADIVIISIL 84 (450)
T ss_dssp EESSHHHHHTTCSEEEECCC
T ss_pred EECCHHHHhcCCCEEEeccc
Confidence 8899875 899999999995
No 127
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=98.91 E-value=5.6e-09 Score=92.03 Aligned_cols=112 Identities=20% Similarity=0.200 Sum_probs=76.9
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|||||+|.||..+|..+...|++|..||+++...+.. .| ....+++++ ++.
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~-------------~g-------------~~~~~~l~ell~~ 227 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALE-------------EG-------------AIYHDTLDSLLGA 227 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHH-------------TT-------------CEECSSHHHHHHT
T ss_pred CEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhh-------------cC-------------CeEeCCHHHHHhh
Confidence 689999999999999999999999999999986432221 12 134557776 789
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCc---cHHHHhhhcCCC-CeEEEeecC
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSI---SITRLASATSRP-CQVIGMHFM 144 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~---~~~~l~~~~~~~-~~~~g~h~~ 144 (297)
||+|+.++|...+.+.-+-++.-+.++++++++ |++.- ....+.+.+... -...++..|
T Consensus 228 sDvV~l~~Plt~~T~~li~~~~l~~mk~gailI-N~aRG~~vde~aL~~aL~~g~i~gA~LDVf 290 (345)
T 4g2n_A 228 SDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVI-NISRGDLINDDALIEALRSKHLFAAGLDVF 290 (345)
T ss_dssp CSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEE-ECSCGGGBCHHHHHHHHHHTSEEEEEESCC
T ss_pred CCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEE-ECCCCchhCHHHHHHHHHhCCceEEEecCC
Confidence 999999999766544333345556778898887 44432 235666666432 223344444
No 128
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=98.91 E-value=5.4e-09 Score=97.71 Aligned_cols=149 Identities=22% Similarity=0.213 Sum_probs=94.5
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|+|||+|.||.++|..|...|++|++||++... +.+ .+.|. ... ++++ ++.
T Consensus 143 ~~vgIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a-----------~~~g~-------------~~~-~l~e~~~~ 196 (529)
T 1ygy_A 143 KTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSP-ARA-----------AQLGI-------------ELL-SLDDLLAR 196 (529)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCH-HHH-----------HHHTC-------------EEC-CHHHHHHH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEECCCCCh-hHH-----------HhcCc-------------EEc-CHHHHHhc
Confidence 68999999999999999999999999999998642 222 22232 223 5555 789
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccH--HHHhhhcCCC-CeEEEeecCC--CCCCCc-----cee
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISI--TRLASATSRP-CQVIGMHFMN--PPPLMK-----LVE 154 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~--~~l~~~~~~~-~~~~g~h~~~--p~~~~~-----~ve 154 (297)
||+|+.|+|...+.+.-+-+++.+.++++++++..+.+-.+ ..+.+.+... ....+..+|. |+...+ .+-
T Consensus 197 aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~g~i~ga~lDv~~~eP~~~~~L~~~~~vi 276 (529)
T 1ygy_A 197 ADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPCTDSPLFELAQVV 276 (529)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSEEEEEESSCSSSSCSCCGGGGCTTEE
T ss_pred CCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCCCchhhHHHHHHHHHcCCccEEEEeeccCCCCCCchHHhCCCEE
Confidence 99999999977443332223355668888888754443333 3455555321 1223444443 222222 355
Q ss_pred EecCCC-ChHHHHHH-----HHHHHHHhCCeE
Q 022407 155 VIRGAD-TSDETFRA-----TKALAERFGKTV 180 (297)
Q Consensus 155 v~~~~~-~~~~~~~~-----~~~l~~~lG~~~ 180 (297)
+.++.+ .++++.++ +..+...++..+
T Consensus 277 lTPh~~~~t~ea~~~~~~~~~~~l~~~l~~~~ 308 (529)
T 1ygy_A 277 VTPHLGASTAEAQDRAGTDVAESVRLALAGEF 308 (529)
T ss_dssp ECSSCSSCBHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred EccccCCCCHHHHHHHHHHHHHHHHHHHcCCC
Confidence 667766 67777665 566777676544
No 129
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=98.90 E-value=2.9e-09 Score=95.03 Aligned_cols=110 Identities=22% Similarity=0.208 Sum_probs=79.3
Q ss_pred cEEEEECCChhHHHHHHHHHHCCC--------cEEEEeCCHHHHH-HHHHHHHHHHHHHHHcC-CCChhhhcccCCceEE
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGL--------DVWLVDTDPDALV-RATKSISSSIQKFVSKG-QLSQAMGTDAPRRLRC 75 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~--------~V~~~d~~~~~~~-~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~i~~ 75 (297)
.||+|||+|.||+++|..|+++|+ +|++|.++++... ...+.++.. .+.- .+. --....++++
T Consensus 35 ~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~----~~N~~YLp---gv~Lp~~i~~ 107 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTR----HQNVKYLP---GITLPDNLVA 107 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTT----CCBTTTBT---TCCCCSSEEE
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhc----CcCcccCC---CCcCCCCcEE
Confidence 589999999999999999999876 4999998865311 111111100 0000 010 0123467889
Q ss_pred ecCccc-ccCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCcc
Q 022407 76 TSNLKD-LHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSIS 124 (297)
Q Consensus 76 ~~~~~~-~~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~ 124 (297)
++|+++ +++||+||.++|... .+.+++++.++.+++.++++.+.++.
T Consensus 108 t~dl~~al~~ad~ii~avPs~~--~r~~l~~l~~~~~~~~~iv~~~KGie 155 (391)
T 4fgw_A 108 NPDLIDSVKDVDIIVFNIPHQF--LPRICSQLKGHVDSHVRAISCLKGFE 155 (391)
T ss_dssp ESCHHHHHTTCSEEEECSCGGG--HHHHHHHHTTTSCTTCEEEECCCSCE
T ss_pred eCCHHHHHhcCCEEEEECChhh--hHHHHHHhccccCCCceeEEeccccc
Confidence 999877 899999999999755 67889999999999999988888764
No 130
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=98.89 E-value=1.2e-08 Score=88.80 Aligned_cols=105 Identities=12% Similarity=0.173 Sum_probs=68.2
Q ss_pred cEEEEECCChhHHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccccc
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGL--DVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLH 83 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 83 (297)
|||+|||+|.||.++|..++..|+ +|.++|+++++++.....+.+.... . + ...++..++++++++
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~-~--~---------~~~~v~~~~~~~a~~ 68 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPI-H--G---------FDTRVTGTNDYGPTE 68 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHH-H--T---------CCCEEEEESSSGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccc-c--C---------CCcEEEECCCHHHhC
Confidence 589999999999999999999887 9999999998766443333332110 0 0 012244456778899
Q ss_pred CCcEEEEecccC--------------HHHHHHHHHHHHhhccCCeEEeecCCCc
Q 022407 84 SADIIVEAIVES--------------EDVKKKLFSELDKITKASAILASNTSSI 123 (297)
Q Consensus 84 ~aD~Vi~~v~e~--------------~~~k~~~~~~l~~~~~~~~ii~s~ts~~ 123 (297)
+||+||.+...+ ..+.+.+...+.++++ +++++.-|...
T Consensus 69 ~aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p-~a~vivvtNPv 121 (314)
T 3nep_X 69 DSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSP-DSTIIVVANPL 121 (314)
T ss_dssp TCSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTCT-TCEEEECCSSH
T ss_pred CCCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCC-CcEEEecCCch
Confidence 999999987432 1223344455667764 55544344433
No 131
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=98.89 E-value=2e-09 Score=94.24 Aligned_cols=114 Identities=20% Similarity=0.221 Sum_probs=77.5
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|+|||+|.||..+|..+...|++|.+||++++..+.+ .......++++ ++.
T Consensus 138 ktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~--------------------------~~~~~~~~l~ell~~ 191 (324)
T 3evt_A 138 QQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPADHF--------------------------HETVAFTATADALAT 191 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCCTTC--------------------------SEEEEGGGCHHHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcchhHhH--------------------------hhccccCCHHHHHhh
Confidence 689999999999999999999999999999986532111 11122345666 789
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCc--cHHHHhhhcCC-CCeEEEeecCC
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSI--SITRLASATSR-PCQVIGMHFMN 145 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~--~~~~l~~~~~~-~~~~~g~h~~~ 145 (297)
||+|+.++|...+.+.-+-++.-+.++++++++..+.+- ....+.+.+.. .....++..|.
T Consensus 192 aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~ 255 (324)
T 3evt_A 192 ANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQLSMAALDVTE 255 (324)
T ss_dssp CSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTTSCSEEEESSCS
T ss_pred CCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhCCceEEEeCCCC
Confidence 999999999766544333345556778888887333322 23567776643 23345565554
No 132
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=98.89 E-value=8.7e-09 Score=89.68 Aligned_cols=114 Identities=22% Similarity=0.332 Sum_probs=75.2
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|+|||+|.||..+|..+...|++|++||++++. +.+ .+.|. .. .++++ ++.
T Consensus 143 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~-----------~~~g~-------------~~-~~l~ell~~ 196 (307)
T 1wwk_A 143 KTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNE-ERA-----------KEVNG-------------KF-VDLETLLKE 196 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHH-----------HHTTC-------------EE-CCHHHHHHH
T ss_pred ceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCCh-hhH-----------hhcCc-------------cc-cCHHHHHhh
Confidence 68999999999999999999999999999998865 222 22232 22 25555 789
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCcc--HHHHhhhcCC-CCeEEEeecCC
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSIS--ITRLASATSR-PCQVIGMHFMN 145 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~--~~~l~~~~~~-~~~~~g~h~~~ 145 (297)
||+|+.++|...+.+.-+-++..+.++++++++..+++-. ...+.+.+.. ...-.++.++.
T Consensus 197 aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~g~i~ga~lDv~~ 260 (307)
T 1wwk_A 197 SDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVVDTNALVKALKEGWIAGAGLDVFE 260 (307)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCS
T ss_pred CCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHhCCCcEEEEecCC
Confidence 9999999997664332222344456788888774444322 2455555532 22334555554
No 133
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=98.88 E-value=8.5e-09 Score=91.21 Aligned_cols=115 Identities=14% Similarity=0.246 Sum_probs=77.7
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|||||+|.||..+|..+...|++|.+||++... +.+ .+.|. ...+++++ ++.
T Consensus 161 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~-----------~~~g~-------------~~~~~l~ell~~ 215 (352)
T 3gg9_A 161 QTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENSK-ERA-----------RADGF-------------AVAESKDALFEQ 215 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSHHHH-HHH-----------HHTTC-------------EECSSHHHHHHH
T ss_pred CEEEEEeECHHHHHHHHHHHhCCCEEEEECCCCCH-HHH-----------HhcCc-------------eEeCCHHHHHhh
Confidence 68999999999999999999999999999998642 221 23332 34556766 789
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCcc--HHHHhhhcCC-CCeEEEeecCC
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSIS--ITRLASATSR-PCQVIGMHFMN 145 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~--~~~l~~~~~~-~~~~~g~h~~~ 145 (297)
||+|+.++|...+.+.-+-.+.-+.++++++++..+.+-. ...+.+.+.. .....++..|.
T Consensus 216 aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~ 279 (352)
T 3gg9_A 216 SDVLSVHLRLNDETRSIITVADLTRMKPTALFVNTSRAELVEENGMVTALNRGRPGMAAIDVFE 279 (352)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCTTHHHHHHHHTSSSEEEECCCS
T ss_pred CCEEEEeccCcHHHHHhhCHHHHhhCCCCcEEEECCCchhhcHHHHHHHHHhCCccEEEecccC
Confidence 9999999997665443333455567788888873333222 2456665532 23344555443
No 134
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=98.88 E-value=3.4e-09 Score=93.67 Aligned_cols=116 Identities=19% Similarity=0.192 Sum_probs=77.9
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|+|||+|.||..+|..+...|++|..||+++...+.+ .+.|. ...+++++ ++.
T Consensus 165 ktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~-----------~~~g~-------------~~~~~l~ell~~ 220 (351)
T 3jtm_A 165 KTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELE-----------KETGA-------------KFVEDLNEMLPK 220 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHH-----------HHHCC-------------EECSCHHHHGGG
T ss_pred CEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHH-----------HhCCC-------------eEcCCHHHHHhc
Confidence 689999999999999999999999999999986443332 12232 34556776 889
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCc--cHHHHhhhcCCC-CeEEEeecCC
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSI--SITRLASATSRP-CQVIGMHFMN 145 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~--~~~~l~~~~~~~-~~~~g~h~~~ 145 (297)
||+|+.++|...+.+.-+-++.-+.++++++++..+.+- ....+.+.+... ..-.++..|.
T Consensus 221 aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~ 284 (351)
T 3jtm_A 221 CDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARGAIMERQAVVDAVESGHIGGYSGDVWD 284 (351)
T ss_dssp CSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCS
T ss_pred CCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECcCchhhCHHHHHHHHHhCCccEEEeCCCC
Confidence 999999999765443333345556788898887333322 235666666432 2223444443
No 135
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=98.88 E-value=1e-08 Score=90.09 Aligned_cols=114 Identities=16% Similarity=0.099 Sum_probs=75.7
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|+|||+|.||..+|..+...|++|++||++++.. .+ .+.|. .. .++++ ++.
T Consensus 166 ~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~-----------~~~g~-------------~~-~~l~ell~~ 219 (335)
T 2g76_A 166 KTLGILGLGRIGREVATRMQSFGMKTIGYDPIISPE-VS-----------ASFGV-------------QQ-LPLEEIWPL 219 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCHH-HH-----------HHTTC-------------EE-CCHHHHGGG
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchh-hh-----------hhcCc-------------ee-CCHHHHHhc
Confidence 689999999999999999999999999999987642 22 22232 22 35555 789
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCc--cHHHHhhhcCCC-CeEEEeecCC
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSI--SITRLASATSRP-CQVIGMHFMN 145 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~--~~~~l~~~~~~~-~~~~g~h~~~ 145 (297)
||+|+.++|...+.+.-+-++..+.++++++++..+++- ....+.+.+... ..-.++.+|.
T Consensus 220 aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL~~g~i~gA~lDV~~ 283 (335)
T 2g76_A 220 CDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFT 283 (335)
T ss_dssp CSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESCCS
T ss_pred CCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCCccccCHHHHHHHHHhCCccEEEEeecC
Confidence 999999999876543322245556788888877433332 224566655322 2223455553
No 136
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=98.85 E-value=2.8e-08 Score=87.09 Aligned_cols=105 Identities=15% Similarity=0.186 Sum_probs=70.6
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcccc
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGL--DVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDL 82 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 82 (297)
.+||+|||+|.||.++|..++..|+ +|.++|+++++++.....+.+... + .....+..+++++++
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~-------~------~~~~~i~~~~d~~~~ 85 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSL-------F------LKTPKIVSSKDYSVT 85 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGG-------G------CSCCEEEECSSGGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhh-------c------cCCCeEEEcCCHHHh
Confidence 4799999999999999999999998 899999998876654333322100 0 012334557788889
Q ss_pred cCCcEEEEeccc--------------CHHHHHHHHHHHHhhccCCeEEeecCCCc
Q 022407 83 HSADIIVEAIVE--------------SEDVKKKLFSELDKITKASAILASNTSSI 123 (297)
Q Consensus 83 ~~aD~Vi~~v~e--------------~~~~k~~~~~~l~~~~~~~~ii~s~ts~~ 123 (297)
++||+||.+..- +..+.+++...+.++++ +++++.-|...
T Consensus 86 ~~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p-~a~vlvvtNPv 139 (331)
T 4aj2_A 86 ANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSP-QCKLLIVSNPV 139 (331)
T ss_dssp TTEEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCT-TCEEEECSSSH
T ss_pred CCCCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCC-CeEEEEecChH
Confidence 999999987521 12334555566778765 55444334433
No 137
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=98.84 E-value=9.8e-09 Score=91.92 Aligned_cols=116 Identities=11% Similarity=0.035 Sum_probs=76.8
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|+|||+|.||..+|..+...|++|.+||+++...+.. .+.|. ....++++ ++.
T Consensus 192 ktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~-----------~~~G~-------------~~~~~l~ell~~ 247 (393)
T 2nac_A 192 MHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVE-----------KELNL-------------TWHATREDMYPV 247 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHH-----------HHHTC-------------EECSSHHHHGGG
T ss_pred CEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchhhH-----------hhcCc-------------eecCCHHHHHhc
Confidence 689999999999999999999999999999986443322 12232 23345666 789
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCcc--HHHHhhhcCCC-CeEEEeecCC
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSIS--ITRLASATSRP-CQVIGMHFMN 145 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~--~~~l~~~~~~~-~~~~g~h~~~ 145 (297)
||+|+.++|...+.+.-+-++..+.++++++++..+.+-. ...+.+.+... ..-.++..|.
T Consensus 248 aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~lDV~~ 311 (393)
T 2nac_A 248 CDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESGRLAGYAGDVWF 311 (393)
T ss_dssp CSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESCCS
T ss_pred CCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHHcCCeeEEEEEecC
Confidence 9999999997654332222445567788888874443322 24577666432 2334455554
No 138
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=98.84 E-value=1.1e-08 Score=89.29 Aligned_cols=114 Identities=18% Similarity=0.231 Sum_probs=75.3
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|+|||+|.||..+|..+...|++|++||++++... + .+.|. .. .++++ ++.
T Consensus 143 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~-----------~~~g~-------------~~-~~l~ell~~ 196 (313)
T 2ekl_A 143 KTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIREK-A-----------EKINA-------------KA-VSLEELLKN 196 (313)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCHHH-H-----------HHTTC-------------EE-CCHHHHHHH
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcchhH-H-----------HhcCc-------------ee-cCHHHHHhh
Confidence 6899999999999999999999999999999886532 2 22332 22 25555 789
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCcc--HHHHhhhcCCC-CeEEEeecCC
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSIS--ITRLASATSRP-CQVIGMHFMN 145 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~--~~~l~~~~~~~-~~~~g~h~~~ 145 (297)
||+|+.++|...+.+.-+-++..+.++++++++..+++-. ...+.+.+... ..-.++.+|.
T Consensus 197 aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~ga~lDv~~ 260 (313)
T 2ekl_A 197 SDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVAVNGKALLDYIKKGKVYAYATDVFW 260 (313)
T ss_dssp CSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGGBCHHHHHHHHHTTCEEEEEESCCS
T ss_pred CCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCCcEEEEecCC
Confidence 9999999997654322111334456788888774444322 24566666432 2234455554
No 139
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=98.82 E-value=5.7e-09 Score=90.99 Aligned_cols=109 Identities=21% Similarity=0.265 Sum_probs=73.5
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|+|||+|.||..+|..+...|++|++||++++..+ +. ..++++ ++.
T Consensus 145 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~------------------------------~~-~~~l~ell~~ 193 (311)
T 2cuk_A 145 LTLGLVGMGRIGQAVAKRALAFGMRVVYHARTPKPLP------------------------------YP-FLSLEELLKE 193 (311)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSS------------------------------SC-BCCHHHHHHH
T ss_pred CEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCcccc------------------------------cc-cCCHHHHHhh
Confidence 6899999999999999999999999999999864210 11 234555 789
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccH--HHHhhhcCCCCeEEEeecCC
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISI--TRLASATSRPCQVIGMHFMN 145 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~--~~l~~~~~~~~~~~g~h~~~ 145 (297)
||+|+.++|...+.+.-+-++..+.++++++++..+++-.+ ..+.+.+.....-.++..|.
T Consensus 194 aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~g~i~ga~lDv~~ 256 (311)
T 2cuk_A 194 ADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTARGALVDTEALVEALRGHLFGAGLDVTD 256 (311)
T ss_dssp CSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHTTTSSEEEESSCS
T ss_pred CCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEECCCCCccCHHHHHHHHhCcCCEEEEeeCC
Confidence 99999999987543322212344567888887744433222 45777665222234556554
No 140
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=98.82 E-value=2e-08 Score=89.11 Aligned_cols=114 Identities=18% Similarity=0.155 Sum_probs=76.3
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|||||+|.||..+|..+...|++|..||++... +.+ .+.|. . ..++++ ++.
T Consensus 177 ktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~~~-~~~-----------~~~g~-------------~-~~~l~ell~~ 230 (365)
T 4hy3_A 177 SEIGIVGFGDLGKALRRVLSGFRARIRVFDPWLPR-SML-----------EENGV-------------E-PASLEDVLTK 230 (365)
T ss_dssp SEEEEECCSHHHHHHHHHHTTSCCEEEEECSSSCH-HHH-----------HHTTC-------------E-ECCHHHHHHS
T ss_pred CEEEEecCCcccHHHHHhhhhCCCEEEEECCCCCH-HHH-----------hhcCe-------------e-eCCHHHHHhc
Confidence 68999999999999999999999999999998532 211 22332 2 245666 889
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCc--cHHHHhhhcCCCCeEEEeecCC
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSI--SITRLASATSRPCQVIGMHFMN 145 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~--~~~~l~~~~~~~~~~~g~h~~~ 145 (297)
||+|+.++|...+.+.-+-++.-+.++++++++..+.+- ....+.+.+....-..++..|.
T Consensus 231 aDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~aaLDV~~ 293 (365)
T 4hy3_A 231 SDFIFVVAAVTSENKRFLGAEAFSSMRRGAAFILLSRADVVDFDALMAAVSSGHIVAASDVYP 293 (365)
T ss_dssp CSEEEECSCSSCC---CCCHHHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSEEEESCCS
T ss_pred CCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEEEECcCCchhCHHHHHHHHHcCCceEEeeCCC
Confidence 999999999876654444455666788898887333222 2356776664332225555553
No 141
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=98.79 E-value=8.1e-09 Score=89.64 Aligned_cols=109 Identities=15% Similarity=0.170 Sum_probs=74.3
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|+|||+|.||..+|..+...|++|.+||++++ +. +. ....++++ ++.
T Consensus 125 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~dr~~~--~~---------------~~-------------~~~~~l~ell~~ 174 (303)
T 1qp8_A 125 EKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPK--EG---------------PW-------------RFTNSLEEALRE 174 (303)
T ss_dssp CEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCC--CS---------------SS-------------CCBSCSHHHHTT
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc--cc---------------Cc-------------ccCCCHHHHHhh
Confidence 6899999999999999999999999999999864 10 10 12345655 789
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCcc--HHHHhhhcCC-CCeEEEeecC
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSIS--ITRLASATSR-PCQVIGMHFM 144 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~--~~~l~~~~~~-~~~~~g~h~~ 144 (297)
||+|+.++|...+.+.-+-++..+.++++++++..+++-. ...+.+.+.. ...-.+...+
T Consensus 175 aDvV~l~~P~~~~t~~~i~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~g~i~gA~lDv~ 237 (303)
T 1qp8_A 175 ARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVLRILKERPQFIFASDVW 237 (303)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCC
T ss_pred CCEEEEeCcCchHHHHHhCHHHHhhCCCCCEEEECCCCcccCHHHHHHHHHhCCceEEEeccC
Confidence 9999999998765333222355567888888873333322 2356655532 2334666666
No 142
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.79 E-value=1.3e-07 Score=72.36 Aligned_cols=100 Identities=16% Similarity=0.178 Sum_probs=65.9
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEe--cCc---
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCT--SNL--- 79 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~--~~~--- 79 (297)
+++|.|+|+|.+|..+|..|.+.|++|+++|+++++++.+ .+.|.. +... ++.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~-----------~~~~~~-----------~~~gd~~~~~~l 63 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELL-----------EDEGFD-----------AVIADPTDESFY 63 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHH-----------HHTTCE-----------EEECCTTCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHH-----------HHCCCc-----------EEECCCCCHHHH
Confidence 4689999999999999999999999999999999887665 222310 0011 111
Q ss_pred c--cccCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHHHH
Q 022407 80 K--DLHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRL 128 (297)
Q Consensus 80 ~--~~~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~~l 128 (297)
. .+.++|+||.+++++. ....+...+.+.. ...+++..++....+.+
T Consensus 64 ~~~~~~~~d~vi~~~~~~~-~n~~~~~~a~~~~-~~~iia~~~~~~~~~~l 112 (141)
T 3llv_A 64 RSLDLEGVSAVLITGSDDE-FNLKILKALRSVS-DVYAIVRVSSPKKKEEF 112 (141)
T ss_dssp HHSCCTTCSEEEECCSCHH-HHHHHHHHHHHHC-CCCEEEEESCGGGHHHH
T ss_pred HhCCcccCCEEEEecCCHH-HHHHHHHHHHHhC-CceEEEEEcChhHHHHH
Confidence 1 2468999999998443 3333444444444 55566655554444434
No 143
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=98.78 E-value=7.2e-08 Score=87.98 Aligned_cols=78 Identities=17% Similarity=0.284 Sum_probs=55.8
Q ss_pred CcEEEEECCChh-HHHHHHHHHHC-----CCcEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEe
Q 022407 5 MKVMGVVGSGQM-GSGIAQLGVMD-----GLDVWLVDTDP--DALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCT 76 (297)
Q Consensus 5 ~~~V~iiG~G~m-G~~iA~~l~~~-----G~~V~~~d~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~ 76 (297)
.+||+|||+|.. |.+++..|+.. +++|.+||+++ ++++.... +.+.+.. ..+ ...+++.+
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~-~~~~~~~--~~~---------~~~~i~~t 74 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGA-LAKRMVE--KAG---------VPIEIHLT 74 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHH-HHHHHHH--HTT---------CCCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHH-HHHHHHh--hcC---------CCcEEEEe
Confidence 469999999999 88888888874 67899999999 88776432 2222110 111 12356677
Q ss_pred cCc-ccccCCcEEEEeccc
Q 022407 77 SNL-KDLHSADIIVEAIVE 94 (297)
Q Consensus 77 ~~~-~~~~~aD~Vi~~v~e 94 (297)
+|+ +++++||+||.+++.
T Consensus 75 ~D~~eal~gAD~VVitagv 93 (450)
T 1s6y_A 75 LDRRRALDGADFVTTQFRV 93 (450)
T ss_dssp SCHHHHHTTCSEEEECCCT
T ss_pred CCHHHHhCCCCEEEEcCCC
Confidence 887 459999999999874
No 144
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=98.78 E-value=4e-08 Score=88.37 Aligned_cols=111 Identities=21% Similarity=0.319 Sum_probs=73.0
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|||||+|.||..+|..+...|++|.+||+++... . .......++++ ++.
T Consensus 157 ktvGIIGlG~IG~~vA~~l~~~G~~V~~yd~~~~~~----------------~------------~~~~~~~sl~ell~~ 208 (416)
T 3k5p_A 157 KTLGIVGYGNIGSQVGNLAESLGMTVRYYDTSDKLQ----------------Y------------GNVKPAASLDELLKT 208 (416)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCCCC----------------B------------TTBEECSSHHHHHHH
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCcchhc----------------c------------cCcEecCCHHHHHhh
Confidence 689999999999999999999999999999874310 0 01234456766 789
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCC--ccHHHHhhhcCCCC-eEEEeecC
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSS--ISITRLASATSRPC-QVIGMHFM 144 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~--~~~~~l~~~~~~~~-~~~g~h~~ 144 (297)
||+|+.++|...+.+.-+-++.-..++++++++..+.+ +....+.+.+.... .-.++.-|
T Consensus 209 aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~~g~i~gAalDVf 271 (416)
T 3k5p_A 209 SDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINNARGSDVDLEALAKVLQEGHLAGAAIDVF 271 (416)
T ss_dssp CSEEEECCCC-----CCBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEECCC
T ss_pred CCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCccEEEeCCC
Confidence 99999999987664433334555677888888733333 23356777764332 23444433
No 145
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=98.75 E-value=8.1e-08 Score=82.67 Aligned_cols=107 Identities=18% Similarity=0.248 Sum_probs=70.2
Q ss_pred cEEEEECCChhHHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccccc
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGL--DVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLH 83 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 83 (297)
|||+|||+|.+|.++|..|+..+. ++.++|+++++.+.....+.+.... -....++..++++++++
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~------------~~~~~~i~~~~d~~~~~ 68 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAG------------IDKYPKIVGGADYSLLK 68 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGG------------GTCCCEEEEESCGGGGT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhccccc------------CCCCCeEecCCCHHHhC
Confidence 589999999999999999988775 7999999987765433333322110 01123455677889999
Q ss_pred CCcEEEEec--cc------------CHHHHHHHHHHHHhhccCCeEEeecCCCccH
Q 022407 84 SADIIVEAI--VE------------SEDVKKKLFSELDKITKASAILASNTSSISI 125 (297)
Q Consensus 84 ~aD~Vi~~v--~e------------~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~ 125 (297)
+||+||.+. |- +..+.+.+..++.++++. ++++.-|..+.+
T Consensus 69 ~aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~-aivlvvsNPvd~ 123 (294)
T 2x0j_A 69 GSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPE-SKILVVTNPMDV 123 (294)
T ss_dssp TCSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTT-CEEEECSSSHHH
T ss_pred CCCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCc-eEEEEecCcchh
Confidence 999999875 21 122344555567777654 444444555443
No 146
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=98.73 E-value=4.9e-08 Score=87.95 Aligned_cols=100 Identities=22% Similarity=0.370 Sum_probs=70.9
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|||||+|.||+.+|..+...|++|..||+++.. ..+ .+....++++ ++.
T Consensus 146 ktlGiIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~----------------~~~------------~~~~~~~l~ell~~ 197 (404)
T 1sc6_A 146 KKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKL----------------PLG------------NATQVQHLSDLLNM 197 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCC----------------CCT------------TCEECSCHHHHHHH
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEEcCCchh----------------ccC------------CceecCCHHHHHhc
Confidence 68999999999999999999999999999987531 001 1234456766 789
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCc--cHHHHhhhcC
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSI--SITRLASATS 133 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~--~~~~l~~~~~ 133 (297)
||+|+.++|...+.+.-+-++.-+.++++++++..+.+- ....+.+.+.
T Consensus 198 aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~ 248 (404)
T 1sc6_A 198 SDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDIPALADALA 248 (404)
T ss_dssp CSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSSSBCHHHHHHHHH
T ss_pred CCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEECCCChHHhHHHHHHHHH
Confidence 999999999876544333244556778888887333322 2246666664
No 147
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=98.73 E-value=3.7e-09 Score=92.39 Aligned_cols=114 Identities=18% Similarity=0.204 Sum_probs=74.4
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|||||+|.||..+|..+...|++|++||++++..+.. .......++++ ++.
T Consensus 141 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~--------------------------~~~~~~~~l~ell~~ 194 (324)
T 3hg7_A 141 RTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGRERAGF--------------------------DQVYQLPALNKMLAQ 194 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCCTTC--------------------------SEEECGGGHHHHHHT
T ss_pred ceEEEEEECHHHHHHHHHHHhCCCEEEEEcCChHHhhhh--------------------------hcccccCCHHHHHhh
Confidence 689999999999999999999999999999986421110 11112345666 789
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCcc--HHHHhhhcCCC-CeEEEeecCC
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSIS--ITRLASATSRP-CQVIGMHFMN 145 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~--~~~l~~~~~~~-~~~~g~h~~~ 145 (297)
||+|+.++|...+.+.-+-.+.-+.++++++++..+.+-. ...+.+.+... ....++..|.
T Consensus 195 aDvV~l~lPlt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~ 258 (324)
T 3hg7_A 195 ADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVGRGNAINEGDLLTALRTGKLGMAVLDVFE 258 (324)
T ss_dssp CSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHTTSSSEEEESCCS
T ss_pred CCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEEECCCchhhCHHHHHHHHHcCCceEEEeccCC
Confidence 9999999996654332222334456788888873333322 35676666432 3334555543
No 148
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=98.73 E-value=1e-07 Score=83.36 Aligned_cols=105 Identities=12% Similarity=0.242 Sum_probs=63.5
Q ss_pred CCCcEEEEECCChhHHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEE-ecCc
Q 022407 3 EKMKVMGVVGSGQMGSGIAQLGVMDGL--DVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRC-TSNL 79 (297)
Q Consensus 3 ~~~~~V~iiG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~-~~~~ 79 (297)
+..+||+|||+|.+|.+++..|+..|+ +|.++|+++++++..... ...+. .....+++ .++.
T Consensus 5 ~~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~d--------l~~~~-------~~~~~~~i~~~~~ 69 (318)
T 1y6j_A 5 KSRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMD--------INHGL-------PFMGQMSLYAGDY 69 (318)
T ss_dssp --CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHH--------HTTSC-------CCTTCEEEC--CG
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHH--------HHHhH-------HhcCCeEEEECCH
Confidence 345799999999999999999999998 999999998766532111 11111 01112222 2456
Q ss_pred ccccCCcEEEEecccCH--------------HHHHHHHHHHHhhccCCeEEeecCCCc
Q 022407 80 KDLHSADIIVEAIVESE--------------DVKKKLFSELDKITKASAILASNTSSI 123 (297)
Q Consensus 80 ~~~~~aD~Vi~~v~e~~--------------~~k~~~~~~l~~~~~~~~ii~s~ts~~ 123 (297)
+++++||+||.+++... .+.+++...+.++++ +++++..|...
T Consensus 70 ~a~~~aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p-~a~viv~tNPv 126 (318)
T 1y6j_A 70 SDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYN-HGVILVVSNPV 126 (318)
T ss_dssp GGGTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCC-SCEEEECSSSH
T ss_pred HHhCCCCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCC-CcEEEEecCcH
Confidence 67999999999886432 113455566777764 55444334433
No 149
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=98.72 E-value=1.8e-08 Score=88.59 Aligned_cols=113 Identities=22% Similarity=0.337 Sum_probs=76.4
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|+|||+|.||..+|..+...|++|.+||++++.... +.|. ... ++++ ++.
T Consensus 142 ~tvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~-------------~~g~-------------~~~-~l~ell~~ 194 (334)
T 2pi1_A 142 LTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKREDLK-------------EKGC-------------VYT-SLDELLKE 194 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHH-------------HTTC-------------EEC-CHHHHHHH
T ss_pred ceEEEECcCHHHHHHHHHHHHCcCEEEEECCCcchhhH-------------hcCc-------------eec-CHHHHHhh
Confidence 68999999999999999999999999999998764311 1221 233 3665 789
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCc--cHHHHhhhcCCC-CeEEEeecCC
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSI--SITRLASATSRP-CQVIGMHFMN 145 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~--~~~~l~~~~~~~-~~~~g~h~~~ 145 (297)
||+|+.++|...+.+.-+-++.-+.++++++++..+.+- ....+.+.+... ....++..|.
T Consensus 195 aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~ 258 (334)
T 2pi1_A 195 SDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFE 258 (334)
T ss_dssp CSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCT
T ss_pred CCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEeecCC
Confidence 999999999765544333345556778898887333222 235677766432 2233444443
No 150
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.71 E-value=2.8e-07 Score=70.08 Aligned_cols=90 Identities=21% Similarity=0.248 Sum_probs=60.1
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecC---c---
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSN---L--- 79 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~---~--- 79 (297)
++|.|+|+|.+|..++..|.+.|++|+++|+++++++.+.+ ..+.. ....+ .
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~----------~~~~~------------~~~~d~~~~~~l 62 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASA----------EIDAL------------VINGDCTKIKTL 62 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----------HCSSE------------EEESCTTSHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH----------hcCcE------------EEEcCCCCHHHH
Confidence 68999999999999999999999999999999887665411 11210 01111 1
Q ss_pred --ccccCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeec
Q 022407 80 --KDLHSADIIVEAIVESEDVKKKLFSELDKITKASAILASN 119 (297)
Q Consensus 80 --~~~~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ 119 (297)
..+.++|+||.+++.+.. . ..+..+.+.+++..+++..
T Consensus 63 ~~~~~~~~d~vi~~~~~~~~-~-~~~~~~~~~~~~~~ii~~~ 102 (140)
T 1lss_A 63 EDAGIEDADMYIAVTGKEEV-N-LMSSLLAKSYGINKTIARI 102 (140)
T ss_dssp HHTTTTTCSEEEECCSCHHH-H-HHHHHHHHHTTCCCEEEEC
T ss_pred HHcCcccCCEEEEeeCCchH-H-HHHHHHHHHcCCCEEEEEe
Confidence 125789999999986532 2 2333344445556666643
No 151
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=98.71 E-value=4.5e-09 Score=92.35 Aligned_cols=103 Identities=17% Similarity=0.175 Sum_probs=72.0
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|+|||+|.||..+|..+...|++|.+||+++...+.. .+.|. .. .++++ ++.
T Consensus 146 ~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~-----------~~~g~-------------~~-~~l~ell~~ 200 (330)
T 4e5n_A 146 ATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQTE-----------QRLGL-------------RQ-VACSELFAS 200 (330)
T ss_dssp CEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHHHH-----------HHHTE-------------EE-CCHHHHHHH
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHhHH-----------HhcCc-------------ee-CCHHHHHhh
Confidence 689999999999999999999999999999987333222 11221 22 35665 789
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCc--cHHHHhhhcC
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSI--SITRLASATS 133 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~--~~~~l~~~~~ 133 (297)
||+|+.++|...+.+.-+-++.-+.++++++++..+.+- ....+.+.+.
T Consensus 201 aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~ 251 (330)
T 4e5n_A 201 SDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRGSVVDEAAVLAALE 251 (330)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred CCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHH
Confidence 999999999765544333345667788898887433332 2356666653
No 152
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=98.71 E-value=1.2e-07 Score=82.85 Aligned_cols=103 Identities=17% Similarity=0.278 Sum_probs=66.0
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcccc
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGL--DVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDL 82 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 82 (297)
.+||+|||+|.+|.+++..|+..|+ +|.++|+++++++.....+.+.. .+ .+ ..-+++. ++.+++
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~-~~--~~---------~~~~v~~-~~~~a~ 72 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHAT-PY--SP---------TTVRVKA-GEYSDC 72 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHG-GG--SS---------SCCEEEE-CCGGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhh-hh--cC---------CCeEEEe-CCHHHh
Confidence 4699999999999999999998885 89999999887664322222210 00 00 0112333 556679
Q ss_pred cCCcEEEEecccC--H------------HHHHHHHHHHHhhccCCeEEeecCC
Q 022407 83 HSADIIVEAIVES--E------------DVKKKLFSELDKITKASAILASNTS 121 (297)
Q Consensus 83 ~~aD~Vi~~v~e~--~------------~~k~~~~~~l~~~~~~~~ii~s~ts 121 (297)
++||+||.+++.. . .+.+++...+.++++ +++++..|.
T Consensus 73 ~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p-~a~viv~tN 124 (317)
T 3d0o_A 73 HDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKF-DGIFLVATN 124 (317)
T ss_dssp TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTC-CSEEEECSS
T ss_pred CCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEecC
Confidence 9999999987432 1 234455566777765 444443343
No 153
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=98.70 E-value=1.2e-07 Score=83.53 Aligned_cols=95 Identities=23% Similarity=0.294 Sum_probs=66.9
Q ss_pred CcEEEEECC-ChhHHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcc-
Q 022407 5 MKVMGVVGS-GQMGSGIAQLGVMDGL--DVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLK- 80 (297)
Q Consensus 5 ~~~V~iiG~-G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~- 80 (297)
.+||+|||+ |.+|+.+|..++..|. +|.++|+++++++.....+.+. .+. ..++..++++.
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~--------~~~-------~~~i~~t~d~~~ 72 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHC--------GFE-------GLNLTFTSDIKE 72 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHH--------CCT-------TCCCEEESCHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhC--------cCC-------CCceEEcCCHHH
Confidence 369999998 9999999999999984 8999999988766543333221 110 13566777775
Q ss_pred cccCCcEEEEeccc--------------CHHHHHHHHHHHHhhccCCe
Q 022407 81 DLHSADIIVEAIVE--------------SEDVKKKLFSELDKITKASA 114 (297)
Q Consensus 81 ~~~~aD~Vi~~v~e--------------~~~~k~~~~~~l~~~~~~~~ 114 (297)
++++||+||.+... +..+.+.+...+.++++...
T Consensus 73 al~dADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~ 120 (343)
T 3fi9_A 73 ALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCK 120 (343)
T ss_dssp HHTTEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCC
T ss_pred HhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcE
Confidence 48999999998521 12345556666888886664
No 154
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=98.69 E-value=8.8e-09 Score=91.67 Aligned_cols=116 Identities=18% Similarity=0.139 Sum_probs=76.8
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCc-EEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-cc
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLD-VWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LH 83 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~-V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~ 83 (297)
++|+|||+|.||..+|..+...|++ |++||+++...+.. .+.| +...+++++ ++
T Consensus 165 ~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~-----------~~~g-------------~~~~~~l~ell~ 220 (364)
T 2j6i_A 165 KTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAE-----------EKVG-------------ARRVENIEELVA 220 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHH-----------HHTT-------------EEECSSHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHH-----------HhcC-------------cEecCCHHHHHh
Confidence 6899999999999999999999998 99999987543322 2222 123346666 78
Q ss_pred CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCc--cHHHHhhhcCCC-CeEEEeecCC
Q 022407 84 SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSI--SITRLASATSRP-CQVIGMHFMN 145 (297)
Q Consensus 84 ~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~--~~~~l~~~~~~~-~~~~g~h~~~ 145 (297)
.||+|+.++|...+.+.-+-++..+.++++++++..+.+- ....+.+.+... ..-.++.-|.
T Consensus 221 ~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~~g~i~gA~LDVf~ 285 (364)
T 2j6i_A 221 QADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVNTARGAICVAEDVAAALESGQLRGYGGDVWF 285 (364)
T ss_dssp TCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCS
T ss_pred cCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEEECCCCchhCHHHHHHHHHcCCCcEEEEecCC
Confidence 9999999999865533323244556678888877444332 235566666432 2234444443
No 155
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=98.69 E-value=9.1e-09 Score=90.89 Aligned_cols=103 Identities=21% Similarity=0.227 Sum_probs=70.4
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|+|||+|.||..+|..+...|++|.+||++++... . .+.|. ....++++ ++.
T Consensus 169 ~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~-~-----------~~~g~-------------~~~~~l~ell~~ 223 (347)
T 1mx3_A 169 ETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGV-E-----------RALGL-------------QRVSTLQDLLFH 223 (347)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTTH-H-----------HHHTC-------------EECSSHHHHHHH
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchhh-H-----------hhcCC-------------eecCCHHHHHhc
Confidence 6899999999999999999999999999998765311 1 11121 23345655 789
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCc--cHHHHhhhcC
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSI--SITRLASATS 133 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~--~~~~l~~~~~ 133 (297)
||+|+.++|...+.+.-+-++.-+.++++++++..+.+- ....+.+.+.
T Consensus 224 aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~ 274 (347)
T 1mx3_A 224 SDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALK 274 (347)
T ss_dssp CSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHH
T ss_pred CCEEEEcCCCCHHHHHHhHHHHHhcCCCCCEEEECCCChHHhHHHHHHHHH
Confidence 999999999765433222244455778888877444332 2355666653
No 156
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=98.68 E-value=6.2e-08 Score=85.23 Aligned_cols=113 Identities=17% Similarity=0.132 Sum_probs=74.6
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|+|||+|.||..+|..+...|++|++||+++++. + .+ . +...+++++ ++.
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-----------~~-~-------------~~~~~~l~ell~~ 199 (333)
T 1j4a_A 147 QVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPE--L-----------EK-K-------------GYYVDSLDDLYKQ 199 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH--H-----------HH-T-------------TCBCSCHHHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchh--H-----------Hh-h-------------CeecCCHHHHHhh
Confidence 689999999999999999999999999999987643 1 00 1 012335555 789
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCc--cHHHHhhhcCCC-CeEEEeecCC
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSI--SITRLASATSRP-CQVIGMHFMN 145 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~--~~~~l~~~~~~~-~~~~g~h~~~ 145 (297)
||+|+.++|...+.+.-+-++.-+.++++++++..+.+- ....+.+.+... ..-.++..|.
T Consensus 200 aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~gA~LDV~~ 263 (333)
T 1j4a_A 200 ADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSGKIFGYAMDVYE 263 (333)
T ss_dssp CSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCT
T ss_pred CCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEEecCC
Confidence 999999999766533222233445678888877444332 235666666432 2334455443
No 157
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=98.68 E-value=3e-07 Score=80.35 Aligned_cols=103 Identities=15% Similarity=0.211 Sum_probs=66.5
Q ss_pred cEEEEECCChhHHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEE-ecCcccc
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGL--DVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRC-TSNLKDL 82 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~-~~~~~~~ 82 (297)
+||+|||+|.+|.+++..++..++ ++.++|+++++++.....+.+.. .....+++ .++.+++
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~---------------~~~~~~~v~~~~~~a~ 70 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQ---------------AFTAPKKIYSGEYSDC 70 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGG---------------GGSCCCEEEECCGGGG
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHH---------------HhcCCeEEEECCHHHh
Confidence 699999999999999999998887 89999999887765322222111 01112222 3556679
Q ss_pred cCCcEEEEecccCH--------------HHHHHHHHHHHhhccCCeEEeecCCCcc
Q 022407 83 HSADIIVEAIVESE--------------DVKKKLFSELDKITKASAILASNTSSIS 124 (297)
Q Consensus 83 ~~aD~Vi~~v~e~~--------------~~k~~~~~~l~~~~~~~~ii~s~ts~~~ 124 (297)
++||+||.+.+-.. .+.+++...+.++++ +++++.-|....
T Consensus 71 ~~aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p-~a~iiv~tNPv~ 125 (318)
T 1ez4_A 71 KDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGF-DGIFLVAANPVD 125 (318)
T ss_dssp TTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTC-CSEEEECSSSHH
T ss_pred CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEeCCcHH
Confidence 99999999874321 234445556777765 444443344333
No 158
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=98.67 E-value=1.9e-07 Score=81.54 Aligned_cols=105 Identities=16% Similarity=0.239 Sum_probs=67.9
Q ss_pred CCcEEEEECCChhHHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEE-ecCcc
Q 022407 4 KMKVMGVVGSGQMGSGIAQLGVMDGL--DVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRC-TSNLK 80 (297)
Q Consensus 4 ~~~~V~iiG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~-~~~~~ 80 (297)
..+||+|||+|.||.++|..|+..|+ +|.++|+++++++.....+.+.. .....++. +++++
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~---------------~~~~~~~i~~~~~~ 72 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDAL---------------PFTSPKKIYSAEYS 72 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTG---------------GGSCCCEEEECCGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhh---------------hhcCCcEEEECcHH
Confidence 34799999999999999999999888 89999999887765432222110 01112233 45577
Q ss_pred cccCCcEEEEecccC--------------HHHHHHHHHHHHhhccCCeEEeecCCCcc
Q 022407 81 DLHSADIIVEAIVES--------------EDVKKKLFSELDKITKASAILASNTSSIS 124 (297)
Q Consensus 81 ~~~~aD~Vi~~v~e~--------------~~~k~~~~~~l~~~~~~~~ii~s~ts~~~ 124 (297)
++++||+||.+..-. ..+.+.+...+.++++ +++++.-|....
T Consensus 73 a~~~aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p-~a~ilvvtNPvd 129 (326)
T 3vku_A 73 DAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGF-NGIFLVAANPVD 129 (326)
T ss_dssp GGTTCSEEEECCCCC----------------CHHHHHHHHHTTTC-CSEEEECSSSHH
T ss_pred HhcCCCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCC-ceEEEEccCchH
Confidence 799999999986321 1123445556777765 554443444333
No 159
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=98.67 E-value=2.8e-09 Score=92.96 Aligned_cols=114 Identities=12% Similarity=0.147 Sum_probs=75.5
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|+|||+|.||+.+|..+...|++|.+||++++..+.. .......++++ ++.
T Consensus 140 ~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~--------------------------~~~~~~~~l~ell~~ 193 (315)
T 3pp8_A 140 FSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSWPGV--------------------------ESYVGREELRAFLNQ 193 (315)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCCCTTC--------------------------EEEESHHHHHHHHHT
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchhhhhh--------------------------hhhcccCCHHHHHhh
Confidence 689999999999999999999999999999986532110 00011135555 789
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCc--cHHHHhhhcCCC-CeEEEeecCC
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSI--SITRLASATSRP-CQVIGMHFMN 145 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~--~~~~l~~~~~~~-~~~~g~h~~~ 145 (297)
||+|+.++|...+.+.-+-++.-+.++++++++..+.+- ....+.+.+... ....++..|.
T Consensus 194 aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~ 257 (315)
T 3pp8_A 194 TRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLARGVHVQEADLLAALDSGKLKGAMLDVFS 257 (315)
T ss_dssp CSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCS
T ss_pred CCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECCCChhhhHHHHHHHHHhCCccEEEcCCCC
Confidence 999999999766544333355566788898887333332 235676666432 2334455554
No 160
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.64 E-value=4.2e-08 Score=85.66 Aligned_cols=89 Identities=13% Similarity=0.252 Sum_probs=64.2
Q ss_pred CCcEEEEECCChhHHHHHHHHHHC-CC-cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc
Q 022407 4 KMKVMGVVGSGQMGSGIAQLGVMD-GL-DVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD 81 (297)
Q Consensus 4 ~~~~V~iiG~G~mG~~iA~~l~~~-G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 81 (297)
..++|+|||+|.||..++..|++. |+ +|++||+++++.+++.+. .+. .+...+++++
T Consensus 134 ~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~----------~~~-----------~~~~~~~~~e 192 (312)
T 2i99_A 134 SSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADT----------VQG-----------EVRVCSSVQE 192 (312)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHH----------SSS-----------CCEECSSHHH
T ss_pred CCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHH----------hhC-----------CeEEeCCHHH
Confidence 347899999999999999999876 86 899999999987765221 110 2345667766
Q ss_pred -ccCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeec
Q 022407 82 -LHSADIIVEAIVESEDVKKKLFSELDKITKASAILASN 119 (297)
Q Consensus 82 -~~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ 119 (297)
+++||+||.|+|... .++.. +.++++++|++.
T Consensus 193 ~v~~aDiVi~atp~~~----~v~~~--~~l~~g~~vi~~ 225 (312)
T 2i99_A 193 AVAGADVIITVTLATE----PILFG--EWVKPGAHINAV 225 (312)
T ss_dssp HHTTCSEEEECCCCSS----CCBCG--GGSCTTCEEEEC
T ss_pred HHhcCCEEEEEeCCCC----cccCH--HHcCCCcEEEeC
Confidence 789999999998532 22222 456777777653
No 161
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=98.64 E-value=5e-07 Score=69.16 Aligned_cols=92 Identities=14% Similarity=0.204 Sum_probs=63.1
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecC------
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSN------ 78 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~------ 78 (297)
..+|.|+|+|.+|..+|..|.+.|++|+++|+++++++.+ .+.|.. ....|
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~-----------~~~g~~------------~i~gd~~~~~~ 63 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDEL-----------RERGVR------------AVLGNAANEEI 63 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHH-----------HHTTCE------------EEESCTTSHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHH-----------HHcCCC------------EEECCCCCHHH
Confidence 3589999999999999999999999999999999988765 233321 11111
Q ss_pred cc--cccCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecC
Q 022407 79 LK--DLHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNT 120 (297)
Q Consensus 79 ~~--~~~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~t 120 (297)
+. .+.++|+||.+++++.... .+...+.+..+.-.+++...
T Consensus 64 l~~a~i~~ad~vi~~~~~~~~n~-~~~~~a~~~~~~~~iiar~~ 106 (140)
T 3fwz_A 64 MQLAHLECAKWLILTIPNGYEAG-EIVASARAKNPDIEIIARAH 106 (140)
T ss_dssp HHHTTGGGCSEEEECCSCHHHHH-HHHHHHHHHCSSSEEEEEES
T ss_pred HHhcCcccCCEEEEECCChHHHH-HHHHHHHHHCCCCeEEEEEC
Confidence 11 2578999999999776432 23333444444445665433
No 162
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=98.63 E-value=1.8e-07 Score=81.51 Aligned_cols=104 Identities=24% Similarity=0.261 Sum_probs=66.6
Q ss_pred cEEEEECCChhHHHHHHHHHHCC--CcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccccc
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDG--LDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLH 83 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G--~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 83 (297)
+||+|||+|.+|.+++..|+..+ .+|.++|+++++++.....+.+. . + . ...-+++. ++.++++
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~--------~--~--~-~~~~~v~~-~~~~a~~ 66 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHA--------T--P--F-AHPVWVWA-GSYGDLE 66 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTT--------G--G--G-SCCCEEEE-CCGGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHh--------H--h--h-cCCeEEEE-CCHHHhC
Confidence 58999999999999999999887 58999999988776432222111 0 0 0 01122333 4667799
Q ss_pred CCcEEEEecccC--------------HHHHHHHHHHHHhhccCCeEEeecCCCcc
Q 022407 84 SADIIVEAIVES--------------EDVKKKLFSELDKITKASAILASNTSSIS 124 (297)
Q Consensus 84 ~aD~Vi~~v~e~--------------~~~k~~~~~~l~~~~~~~~ii~s~ts~~~ 124 (297)
+||+||.+.+-. ..+.+++...+.++++. ++++.-|....
T Consensus 67 ~aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~-a~iiv~tNPv~ 120 (310)
T 2xxj_A 67 GARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPE-AVLLVATNPVD 120 (310)
T ss_dssp TEEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTT-CEEEECSSSHH
T ss_pred CCCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCC-cEEEEecCchH
Confidence 999999987432 23344555667777654 44443344333
No 163
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=98.63 E-value=4.8e-07 Score=79.29 Aligned_cols=104 Identities=17% Similarity=0.243 Sum_probs=66.9
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEE-ecCccc
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGL--DVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRC-TSNLKD 81 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~-~~~~~~ 81 (297)
.+||+|||+|.+|.+++..++..++ +|.++|+++++++.....+.+ .. .....+++ .++.++
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~--------~~-------~~~~~~~i~~~~~~a 73 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSN--------AL-------PFTSPKKIYSAEYSD 73 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHT--------TG-------GGSCCCEEEECCGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHH--------HH-------HhcCCeEEEECCHHH
Confidence 4699999999999999999998886 899999998877653222211 10 01122222 355667
Q ss_pred ccCCcEEEEecccCH--------------HHHHHHHHHHHhhccCCeEEeecCCCcc
Q 022407 82 LHSADIIVEAIVESE--------------DVKKKLFSELDKITKASAILASNTSSIS 124 (297)
Q Consensus 82 ~~~aD~Vi~~v~e~~--------------~~k~~~~~~l~~~~~~~~ii~s~ts~~~ 124 (297)
+++||+||.+.+-.. .+.+.+...+.++++...++. -|....
T Consensus 74 ~~~aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv-~tNPv~ 129 (326)
T 2zqz_A 74 AKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLV-AANPVD 129 (326)
T ss_dssp GGGCSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEE-CSSSHH
T ss_pred hCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEE-eCCcHH
Confidence 999999999874321 234445556777775444443 344333
No 164
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=98.60 E-value=1.7e-08 Score=89.76 Aligned_cols=110 Identities=19% Similarity=0.176 Sum_probs=74.0
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|||||+|.||..+|..+...|++|.+||++.+.. ..+ ....++++ ++.
T Consensus 120 ktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~---------------~~~--------------~~~~sl~ell~~ 170 (381)
T 3oet_A 120 RTIGIVGVGNVGSRLQTRLEALGIRTLLCDPPRAAR---------------GDE--------------GDFRTLDELVQE 170 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHT---------------TCC--------------SCBCCHHHHHHH
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCChHHh---------------ccC--------------cccCCHHHHHhh
Confidence 689999999999999999999999999999743211 001 12345666 789
Q ss_pred CcEEEEecccCHH----HHHHHHHHHHhhccCCeEEeecCCCcc---HHHHhhhcCC-CCeEEEeecCC
Q 022407 85 ADIIVEAIVESED----VKKKLFSELDKITKASAILASNTSSIS---ITRLASATSR-PCQVIGMHFMN 145 (297)
Q Consensus 85 aD~Vi~~v~e~~~----~k~~~~~~l~~~~~~~~ii~s~ts~~~---~~~l~~~~~~-~~~~~g~h~~~ 145 (297)
||+|+.++|-..+ .+.-+-.+.-+.++++++++ |++.-+ ...+.+.+.. .....++..|.
T Consensus 171 aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailI-N~aRG~vvde~aL~~aL~~g~i~gA~LDV~e 238 (381)
T 3oet_A 171 ADVLTFHTPLYKDGPYKTLHLADETLIRRLKPGAILI-NACRGPVVDNAALLARLNAGQPLSVVLDVWE 238 (381)
T ss_dssp CSEEEECCCCCCSSTTCCTTSBCHHHHHHSCTTEEEE-ECSCGGGBCHHHHHHHHHTTCCEEEEESCCT
T ss_pred CCEEEEcCcCCccccccchhhcCHHHHhcCCCCcEEE-ECCCCcccCHHHHHHHHHhCCCeEEEeeccc
Confidence 9999999986554 32222234445678888887 444332 3567766643 33455666554
No 165
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.60 E-value=4.9e-07 Score=72.37 Aligned_cols=89 Identities=15% Similarity=0.199 Sum_probs=59.4
Q ss_pred cEEEEECCChhHHHHHHHHHHC-CCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEe--cC---c
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMD-GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCT--SN---L 79 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~-G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~--~~---~ 79 (297)
++|.|+|+|.||..+|..|.+. |++|+++|+++++.+.+ .+.|.. +... ++ +
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~-----------~~~g~~-----------~~~gd~~~~~~l 97 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQH-----------RSEGRN-----------VISGDATDPDFW 97 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHH-----------HHTTCC-----------EEECCTTCHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHH-----------HHCCCC-----------EEEcCCCCHHHH
Confidence 5899999999999999999999 99999999999887665 333321 0010 11 1
Q ss_pred c---cccCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEe
Q 022407 80 K---DLHSADIIVEAIVESEDVKKKLFSELDKITKASAILA 117 (297)
Q Consensus 80 ~---~~~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~ 117 (297)
. .+.++|+||.+++++... ..+...+.+..+...+++
T Consensus 98 ~~~~~~~~ad~vi~~~~~~~~~-~~~~~~~~~~~~~~~ii~ 137 (183)
T 3c85_A 98 ERILDTGHVKLVLLAMPHHQGN-QTALEQLQRRNYKGQIAA 137 (183)
T ss_dssp HTBCSCCCCCEEEECCSSHHHH-HHHHHHHHHTTCCSEEEE
T ss_pred HhccCCCCCCEEEEeCCChHHH-HHHHHHHHHHCCCCEEEE
Confidence 1 256899999999875542 333344444433444444
No 166
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.58 E-value=3.4e-08 Score=76.12 Aligned_cols=69 Identities=16% Similarity=0.201 Sum_probs=53.1
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|+|||+|.||..++..|...|++|+++|+++++.+.+.+. .+. .+...++..+ +++
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~----------~~~-----------~~~~~~~~~~~~~~ 80 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEK----------YEY-----------EYVLINDIDSLIKN 80 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHH----------HTC-----------EEEECSCHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHH----------hCC-----------ceEeecCHHHHhcC
Confidence 689999999999999999999999999999999887664221 111 1223445554 788
Q ss_pred CcEEEEecccC
Q 022407 85 ADIIVEAIVES 95 (297)
Q Consensus 85 aD~Vi~~v~e~ 95 (297)
+|+||.|+|..
T Consensus 81 ~Divi~at~~~ 91 (144)
T 3oj0_A 81 NDVIITATSSK 91 (144)
T ss_dssp CSEEEECSCCS
T ss_pred CCEEEEeCCCC
Confidence 99999999865
No 167
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=98.56 E-value=1.9e-08 Score=88.50 Aligned_cols=112 Identities=21% Similarity=0.185 Sum_probs=74.6
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|+|||+|.||..+|..+...|++|.+||++++.. .+.+ .... ++++ ++.
T Consensus 149 ktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~--------------~~~~-------------~~~~-~l~ell~~ 200 (343)
T 2yq5_A 149 LTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNPE--------------FEPF-------------LTYT-DFDTVLKE 200 (343)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCGG--------------GTTT-------------CEEC-CHHHHHHH
T ss_pred CeEEEEecCHHHHHHHHHHhhCCCEEEEECCChhhh--------------hhcc-------------cccc-CHHHHHhc
Confidence 689999999999999999999999999999987530 1111 1233 6666 789
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCc--cHHHHhhhcCC-CCeEEEeecCC
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSI--SITRLASATSR-PCQVIGMHFMN 145 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~--~~~~l~~~~~~-~~~~~g~h~~~ 145 (297)
||+|+.++|...+.+.-+-.+.-+.++++++++..+.+- ....+.+.+.. .....++.-|.
T Consensus 201 aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~LDV~~ 264 (343)
T 2yq5_A 201 ADIVSLHTPLFPSTENMIGEKQLKEMKKSAYLINCARGELVDTGALIKALQDGEIAGAGLDTLA 264 (343)
T ss_dssp CSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSCEEESCCT
T ss_pred CCEEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCCcEEEecccc
Confidence 999999999765543333344556678888887333322 23566666532 22334555443
No 168
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=98.56 E-value=2.4e-08 Score=88.95 Aligned_cols=111 Identities=18% Similarity=0.168 Sum_probs=72.7
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|||||+|.||..+|..+...|++|.+||++++.. +.+. ...++++ +++
T Consensus 117 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~---------------~~g~--------------~~~~l~ell~~ 167 (380)
T 2o4c_A 117 RTYGVVGAGQVGGRLVEVLRGLGWKVLVCDPPRQAR---------------EPDG--------------EFVSLERLLAE 167 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHH---------------STTS--------------CCCCHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCChhhh---------------ccCc--------------ccCCHHHHHHh
Confidence 689999999999999999999999999999765321 1111 1235555 789
Q ss_pred CcEEEEecccCHH----HHHHHHHHHHhhccCCeEEeecCCCc--cHHHHhhhcCCC-CeEEEeecCC
Q 022407 85 ADIIVEAIVESED----VKKKLFSELDKITKASAILASNTSSI--SITRLASATSRP-CQVIGMHFMN 145 (297)
Q Consensus 85 aD~Vi~~v~e~~~----~k~~~~~~l~~~~~~~~ii~s~ts~~--~~~~l~~~~~~~-~~~~g~h~~~ 145 (297)
||+|+.++|...+ .+.-+-++.-+.++++++++..+.+- ....+.+.+... ..-.++..|.
T Consensus 168 aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~~g~i~~A~LDV~~ 235 (380)
T 2o4c_A 168 ADVISLHTPLNRDGEHPTRHLLDEPRLAALRPGTWLVNASRGAVVDNQALRRLLEGGADLEVALDVWE 235 (380)
T ss_dssp CSEEEECCCCCSSSSSCCTTSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCT
T ss_pred CCEEEEeccCccccccchhhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCceEEeeeec
Confidence 9999999987654 32222234556678888877333332 225576666432 2344555443
No 169
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.55 E-value=1.8e-07 Score=71.48 Aligned_cols=86 Identities=17% Similarity=0.305 Sum_probs=58.6
Q ss_pred CcEEEEECC----ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcc
Q 022407 5 MKVMGVVGS----GQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLK 80 (297)
Q Consensus 5 ~~~V~iiG~----G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 80 (297)
.++|+|||+ |.||..++.+|.+.||+|+.+|++.+.+ ..+.+..+++
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i-----------------------------~G~~~~~s~~ 64 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI-----------------------------EGLKCYRSVR 64 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE-----------------------------TTEECBSSGG
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE-----------------------------CCeeecCCHH
Confidence 368999999 9999999999999999866666543211 1135666777
Q ss_pred c-ccCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCc
Q 022407 81 D-LHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSI 123 (297)
Q Consensus 81 ~-~~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~ 123 (297)
+ ...+|+++.++|. . ...+++.++.+ .....++. .+++.
T Consensus 65 el~~~vDlvii~vp~-~-~v~~v~~~~~~-~g~~~i~~-~~~~~ 104 (138)
T 1y81_A 65 ELPKDVDVIVFVVPP-K-VGLQVAKEAVE-AGFKKLWF-QPGAE 104 (138)
T ss_dssp GSCTTCCEEEECSCH-H-HHHHHHHHHHH-TTCCEEEE-CTTSC
T ss_pred HhCCCCCEEEEEeCH-H-HHHHHHHHHHH-cCCCEEEE-cCccH
Confidence 7 4679999999994 3 34556665554 23345554 33444
No 170
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.54 E-value=8.7e-07 Score=68.97 Aligned_cols=39 Identities=36% Similarity=0.486 Sum_probs=35.5
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHH
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVR 43 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~ 43 (297)
.++|.|+|+|.+|..++..|...|++|+++|+++++++.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~ 57 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHR 57 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHH
Confidence 368999999999999999999999999999999887654
No 171
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.53 E-value=2.7e-07 Score=67.96 Aligned_cols=41 Identities=32% Similarity=0.299 Sum_probs=37.1
Q ss_pred CCcEEEEECCChhHHHHHHHHHHCC-CcEEEEeCCHHHHHHH
Q 022407 4 KMKVMGVVGSGQMGSGIAQLGVMDG-LDVWLVDTDPDALVRA 44 (297)
Q Consensus 4 ~~~~V~iiG~G~mG~~iA~~l~~~G-~~V~~~d~~~~~~~~~ 44 (297)
+.++|.|+|+|.||..++..|.+.| ++|+++|+++++++.+
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~ 45 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVL 45 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHH
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHH
Confidence 4578999999999999999999999 9999999999877654
No 172
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=98.50 E-value=1.7e-07 Score=82.34 Aligned_cols=112 Identities=19% Similarity=0.214 Sum_probs=74.5
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|+|||+|.||..+|..+...|++|++||++++.. + .. .+.. .++++ ++.
T Consensus 146 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~----------------------~~---~~~~-~~l~ell~~ 197 (333)
T 1dxy_A 146 QTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKG--D----------------------HP---DFDY-VSLEDLFKQ 197 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSS--C----------------------CT---TCEE-CCHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCcchh--h----------------------Hh---cccc-CCHHHHHhc
Confidence 689999999999999999999999999999986421 0 00 0122 25555 789
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCC--ccHHHHhhhcCCC-CeEEEeecCC
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSS--ISITRLASATSRP-CQVIGMHFMN 145 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~--~~~~~l~~~~~~~-~~~~g~h~~~ 145 (297)
||+|+.++|...+.+.-+-++.-+.++++++++..+.+ +....+.+.+... ..-.++..|.
T Consensus 198 aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~g~i~gA~LDV~~ 261 (333)
T 1dxy_A 198 SDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARPNLIDTQAMLSNLKSGKLAGVGIDTYE 261 (333)
T ss_dssp CSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEESSCT
T ss_pred CCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCccEEEEecCC
Confidence 99999999987654332224455667888877733332 2335677766432 2334454443
No 173
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=98.50 E-value=1.3e-06 Score=66.64 Aligned_cols=93 Identities=16% Similarity=0.151 Sum_probs=59.6
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEe--cCc---
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCT--SNL--- 79 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~--~~~--- 79 (297)
.++|.|+|+|.+|..++..|.+.|++|+++|+++++.+.+ .+.+. ..... ++.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~-----------~~~~~-----------~~~~~d~~~~~~l 63 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAY-----------ASYAT-----------HAVIANATEENEL 63 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTT-----------TTTCS-----------EEEECCTTCHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----------HHhCC-----------EEEEeCCCCHHHH
Confidence 3579999999999999999999999999999998765443 11111 00010 111
Q ss_pred c--cccCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecC
Q 022407 80 K--DLHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNT 120 (297)
Q Consensus 80 ~--~~~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~t 120 (297)
. .+.++|+||.+++.+.+....+.....+ ..+..++...+
T Consensus 64 ~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~-~~~~~ii~~~~ 105 (144)
T 2hmt_A 64 LSLGIRNFEYVIVAIGANIQASTLTTLLLKE-LDIPNIWVKAQ 105 (144)
T ss_dssp HTTTGGGCSEEEECCCSCHHHHHHHHHHHHH-TTCSEEEEECC
T ss_pred HhcCCCCCCEEEECCCCchHHHHHHHHHHHH-cCCCeEEEEeC
Confidence 1 1568999999998764333333333333 33455665443
No 174
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.47 E-value=3.1e-07 Score=70.80 Aligned_cols=101 Identities=16% Similarity=0.119 Sum_probs=65.0
Q ss_pred cEEEEECC----ChhHHHHHHHHHHCCCcEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCc
Q 022407 6 KVMGVVGS----GQMGSGIAQLGVMDGLDVWLVDTDP--DALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNL 79 (297)
Q Consensus 6 ~~V~iiG~----G~mG~~iA~~l~~~G~~V~~~d~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 79 (297)
++|+|||+ |.||..++.+|.+.||+|+.+|++. +.+ ..+.+..++
T Consensus 14 ~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i-----------------------------~G~~~~~sl 64 (145)
T 2duw_A 14 RTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTL-----------------------------LGQQGYATL 64 (145)
T ss_dssp CCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEE-----------------------------TTEECCSST
T ss_pred CEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCccccccc-----------------------------CCeeccCCH
Confidence 58999999 8999999999999999977776654 211 123556677
Q ss_pred cc-ccCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHHHHhhhc-CCCCeEEE
Q 022407 80 KD-LHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASAT-SRPCQVIG 140 (297)
Q Consensus 80 ~~-~~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~~l~~~~-~~~~~~~g 140 (297)
++ ...+|+++.++|. .. ..+++.++.+. ....+++. +++.. .++.+.+ ....+++|
T Consensus 65 ~el~~~~Dlvii~vp~-~~-v~~v~~~~~~~-g~~~i~i~-~~~~~-~~l~~~a~~~Gi~~ig 122 (145)
T 2duw_A 65 ADVPEKVDMVDVFRNS-EA-AWGVAQEAIAI-GAKTLWLQ-LGVIN-EQAAVLAREAGLSVVM 122 (145)
T ss_dssp TTCSSCCSEEECCSCS-TH-HHHHHHHHHHH-TCCEEECC-TTCCC-HHHHHHHHTTTCEEEC
T ss_pred HHcCCCCCEEEEEeCH-HH-HHHHHHHHHHc-CCCEEEEc-CChHH-HHHHHHHHHcCCEEEc
Confidence 77 4578999999995 33 44556655553 33455553 44443 3333333 23345553
No 175
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=98.45 E-value=4.9e-07 Score=77.39 Aligned_cols=68 Identities=18% Similarity=0.309 Sum_probs=53.3
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|+|||+|.||++++..|.+.|++|+++||++++.+.+ .+. + .+...+++++ +++
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l-----------~~~--~----------g~~~~~~~~~~~~~ 186 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKL-----------AQK--F----------PLEVVNSPEEVIDK 186 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHH-----------TTT--S----------CEEECSCGGGTGGG
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHH-----------HHH--c----------CCeeehhHHhhhcC
Confidence 689999999999999999999999999999999876654 111 0 1234445554 789
Q ss_pred CcEEEEecccCH
Q 022407 85 ADIIVEAIVESE 96 (297)
Q Consensus 85 aD~Vi~~v~e~~ 96 (297)
+|+||.|+|...
T Consensus 187 aDiVi~atp~~~ 198 (275)
T 2hk9_A 187 VQVIVNTTSVGL 198 (275)
T ss_dssp CSEEEECSSTTS
T ss_pred CCEEEEeCCCCC
Confidence 999999998654
No 176
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=98.40 E-value=6.6e-07 Score=77.60 Aligned_cols=68 Identities=25% Similarity=0.277 Sum_probs=51.6
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|+|||+|.||..+|..+...|.+|++||+++++.+.+ .+.|. ......++++ +++
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~-----------~~~g~-----------~~~~~~~l~~~l~~ 215 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARI-----------TEMGL-----------VPFHTDELKEHVKD 215 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-----------HHTTC-----------EEEEGGGHHHHSTT
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-----------HHCCC-----------eEEchhhHHHHhhC
Confidence 689999999999999999999999999999998765443 12221 0011234544 789
Q ss_pred CcEEEEecccC
Q 022407 85 ADIIVEAIVES 95 (297)
Q Consensus 85 aD~Vi~~v~e~ 95 (297)
||+||.++|..
T Consensus 216 aDvVi~~~p~~ 226 (300)
T 2rir_A 216 IDICINTIPSM 226 (300)
T ss_dssp CSEEEECCSSC
T ss_pred CCEEEECCChh
Confidence 99999999863
No 177
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=98.39 E-value=1.7e-07 Score=82.32 Aligned_cols=112 Identities=21% Similarity=0.137 Sum_probs=72.8
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|+|||+|.||..+|..+...|++|++||++++.. + + ..+.. .++++ ++.
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~------------~-------------~~~~~-~~l~ell~~ 198 (331)
T 1xdw_A 147 CTVGVVGLGRIGRVAAQIFHGMGATVIGEDVFEIKG--I------------E-------------DYCTQ-VSLDEVLEK 198 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS--C------------T-------------TTCEE-CCHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCccHH--H------------H-------------hcccc-CCHHHHHhh
Confidence 689999999999999999999999999999986421 0 0 00122 35655 789
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCC--ccHHHHhhhcCCC-CeEEEeecCC
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSS--ISITRLASATSRP-CQVIGMHFMN 145 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~--~~~~~l~~~~~~~-~~~~g~h~~~ 145 (297)
||+|+.++|...+.+.-+-.+.-+.++++++++..+.+ +....+.+.+... ..-.++..|.
T Consensus 199 aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~~g~i~gA~LDV~~ 262 (331)
T 1xdw_A 199 SDIITIHAPYIKENGAVVTRDFLKKMKDGAILVNCARGQLVDTEAVIEAVESGKLGGYGCDVLD 262 (331)
T ss_dssp CSEEEECCCCCTTTCCSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCT
T ss_pred CCEEEEecCCchHHHHHhCHHHHhhCCCCcEEEECCCcccccHHHHHHHHHhCCceEEEEecCC
Confidence 99999999976543322223444567888877733322 2235666666432 2334455453
No 178
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=98.38 E-value=8.3e-07 Score=76.69 Aligned_cols=85 Identities=18% Similarity=0.186 Sum_probs=58.4
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|+|||+|.||..+|..+...|.+|+++|+++++.+.+ .+.|. ......++++ +++
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~-----------~~~g~-----------~~~~~~~l~~~l~~ 213 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARI-----------AEMGM-----------EPFHISKAAQELRD 213 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-----------HHTTS-----------EEEEGGGHHHHTTT
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHH-----------HHCCC-----------eecChhhHHHHhcC
Confidence 689999999999999999999999999999998765443 22231 0001134444 789
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEe
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILA 117 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~ 117 (297)
+|+|+.++|....-. . ..+.++++.+++
T Consensus 214 aDvVi~~~p~~~i~~-~----~l~~mk~~~~li 241 (293)
T 3d4o_A 214 VDVCINTIPALVVTA-N----VLAEMPSHTFVI 241 (293)
T ss_dssp CSEEEECCSSCCBCH-H----HHHHSCTTCEEE
T ss_pred CCEEEECCChHHhCH-H----HHHhcCCCCEEE
Confidence 999999998633211 1 123455666655
No 179
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=98.36 E-value=2.8e-06 Score=74.53 Aligned_cols=109 Identities=10% Similarity=0.080 Sum_probs=66.9
Q ss_pred CCCCCcEEEEECC-ChhHHHHHHHHHHCCC-------cEEEEeCC----HHHHHHHHHHHHHHHHHHHHcCCCChhhhcc
Q 022407 1 MEEKMKVMGVVGS-GQMGSGIAQLGVMDGL-------DVWLVDTD----PDALVRATKSISSSIQKFVSKGQLSQAMGTD 68 (297)
Q Consensus 1 M~~~~~~V~iiG~-G~mG~~iA~~l~~~G~-------~V~~~d~~----~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 68 (297)
|.+..+||+|+|+ |.+|.+++..|+..|+ +|.++|++ +++++..... ...+.. .
T Consensus 1 m~~~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~d--------l~~~~~------~ 66 (329)
T 1b8p_A 1 MAKTPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMME--------IDDCAF------P 66 (329)
T ss_dssp --CCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHH--------HHTTTC------T
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHH--------Hhhhcc------c
Confidence 6444579999998 9999999999999886 89999999 5444321111 111111 0
Q ss_pred cCCceEEecCccc-ccCCcEEEEeccc--C------------HHHHHHHHHHHHhhccCCeEEeecCCCc
Q 022407 69 APRRLRCTSNLKD-LHSADIIVEAIVE--S------------EDVKKKLFSELDKITKASAILASNTSSI 123 (297)
Q Consensus 69 ~~~~i~~~~~~~~-~~~aD~Vi~~v~e--~------------~~~k~~~~~~l~~~~~~~~ii~s~ts~~ 123 (297)
....+..+++..+ +++||+||.+..- . ....+.+.+.+.+++.++++++..|+..
T Consensus 67 ~~~~i~~~~~~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv 136 (329)
T 1b8p_A 67 LLAGMTAHADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPA 136 (329)
T ss_dssp TEEEEEEESSHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred ccCcEEEecCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCch
Confidence 1234556666544 8999999987521 1 1234455666777764555544334333
No 180
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=98.36 E-value=3.6e-06 Score=72.98 Aligned_cols=104 Identities=18% Similarity=0.291 Sum_probs=63.4
Q ss_pred cEEEEEC-CChhHHHHHHHHHHCCC--cEEEEeC--CHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcc
Q 022407 6 KVMGVVG-SGQMGSGIAQLGVMDGL--DVWLVDT--DPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLK 80 (297)
Q Consensus 6 ~~V~iiG-~G~mG~~iA~~l~~~G~--~V~~~d~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 80 (297)
+||+|+| +|.+|.+++..|+..|+ ++.++|+ ++++++.....+.+. ...+ ..-+++. ++.+
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~----~~~~---------~~~~v~~-~~~~ 66 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHG----IAYD---------SNTRVRQ-GGYE 66 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHH----HTTT---------CCCEEEE-CCGG
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHH----HhhC---------CCcEEEe-CCHH
Confidence 4899999 99999999999998886 7999999 876654322222111 1100 0112222 4566
Q ss_pred cccCCcEEEEeccc--CH------------HHHHHHHHHHHhhccCCeEEeecCCCcc
Q 022407 81 DLHSADIIVEAIVE--SE------------DVKKKLFSELDKITKASAILASNTSSIS 124 (297)
Q Consensus 81 ~~~~aD~Vi~~v~e--~~------------~~k~~~~~~l~~~~~~~~ii~s~ts~~~ 124 (297)
++++||+||.+..- .. ...+.+.+.+.++.+ +.+++..|....
T Consensus 67 a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p-~~~viv~SNPv~ 123 (303)
T 1o6z_A 67 DTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHND-DYISLTTSNPVD 123 (303)
T ss_dssp GGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCS-CCEEEECCSSHH
T ss_pred HhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC-CcEEEEeCChHH
Confidence 69999999988632 11 234445556666654 444443444443
No 181
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=98.36 E-value=5e-06 Score=68.43 Aligned_cols=89 Identities=11% Similarity=0.113 Sum_probs=60.1
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecC------c
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSN------L 79 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~------~ 79 (297)
|||.|+|+|.+|..+|..|.+.|++|+++|+++++++.+.+ ..+. . ....| +
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~----------~~~~-----------~-~i~gd~~~~~~l 58 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAK----------KLKA-----------T-IIHGDGSHKEIL 58 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----------HSSS-----------E-EEESCTTSHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH----------HcCC-----------e-EEEcCCCCHHHH
Confidence 47999999999999999999999999999999998776421 1121 0 11111 1
Q ss_pred c--cccCCcEEEEecccCHHHHHHHHHHHHh-hccCCeEEee
Q 022407 80 K--DLHSADIIVEAIVESEDVKKKLFSELDK-ITKASAILAS 118 (297)
Q Consensus 80 ~--~~~~aD~Vi~~v~e~~~~k~~~~~~l~~-~~~~~~ii~s 118 (297)
. .+.+||+||.+++++.. ......+.+ ..+...+++.
T Consensus 59 ~~a~i~~ad~vi~~~~~d~~--n~~~~~~a~~~~~~~~iia~ 98 (218)
T 3l4b_C 59 RDAEVSKNDVVVILTPRDEV--NLFIAQLVMKDFGVKRVVSL 98 (218)
T ss_dssp HHHTCCTTCEEEECCSCHHH--HHHHHHHHHHTSCCCEEEEC
T ss_pred HhcCcccCCEEEEecCCcHH--HHHHHHHHHHHcCCCeEEEE
Confidence 1 26789999999987653 233333333 3455556653
No 182
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=98.28 E-value=5.5e-06 Score=73.39 Aligned_cols=72 Identities=24% Similarity=0.312 Sum_probs=55.7
Q ss_pred CCcEEEEECCChhHHHHHHHHHHC--CCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcc
Q 022407 4 KMKVMGVVGSGQMGSGIAQLGVMD--GLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLK 80 (297)
Q Consensus 4 ~~~~V~iiG~G~mG~~iA~~l~~~--G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 80 (297)
+..||+|||+|.||..++..+.+. +++++ ++|+++++++.+.+. .| +...+|++
T Consensus 12 ~~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~----------~~-------------~~~~~~~~ 68 (354)
T 3q2i_A 12 RKIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVER----------TG-------------ARGHASLT 68 (354)
T ss_dssp SCEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHH----------HC-------------CEEESCHH
T ss_pred CcceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHH----------cC-------------CceeCCHH
Confidence 457999999999999999999887 77755 899999887665211 12 24677877
Q ss_pred c-cc--CCcEEEEecccCHHH
Q 022407 81 D-LH--SADIIVEAIVESEDV 98 (297)
Q Consensus 81 ~-~~--~aD~Vi~~v~e~~~~ 98 (297)
+ ++ ++|+|+.|+|...+.
T Consensus 69 ~ll~~~~~D~V~i~tp~~~h~ 89 (354)
T 3q2i_A 69 DMLAQTDADIVILTTPSGLHP 89 (354)
T ss_dssp HHHHHCCCSEEEECSCGGGHH
T ss_pred HHhcCCCCCEEEECCCcHHHH
Confidence 7 54 799999999987753
No 183
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=98.25 E-value=6.6e-06 Score=71.69 Aligned_cols=94 Identities=16% Similarity=0.173 Sum_probs=61.7
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCC--CcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEE---ecCc
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDG--LDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRC---TSNL 79 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G--~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~---~~~~ 79 (297)
+||+|||+ |.+|.+++..|+..| ++|.++|+++. +.... . +.... ...+++. ++++
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~--~~~a~-------d-L~~~~--------~~~~l~~~~~t~d~ 62 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHT--PGVAA-------D-LSHIE--------TRATVKGYLGPEQL 62 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSH--HHHHH-------H-HTTSS--------SSCEEEEEESGGGH
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCcc--HHHHH-------H-HhccC--------cCceEEEecCCCCH
Confidence 48999998 999999999999988 79999999871 11100 0 11111 1123444 2567
Q ss_pred cc-ccCCcEEEEeccc--CH------------HHHHHHHHHHHhhccCCeEEe
Q 022407 80 KD-LHSADIIVEAIVE--SE------------DVKKKLFSELDKITKASAILA 117 (297)
Q Consensus 80 ~~-~~~aD~Vi~~v~e--~~------------~~k~~~~~~l~~~~~~~~ii~ 117 (297)
++ +++||+||.+... .. .+.+.+...+.++++...++.
T Consensus 63 ~~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv 115 (314)
T 1mld_A 63 PDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICI 115 (314)
T ss_dssp HHHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred HHHhCCCCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEE
Confidence 75 8999999998732 11 345566667777775444443
No 184
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=98.23 E-value=4e-06 Score=73.60 Aligned_cols=100 Identities=10% Similarity=0.072 Sum_probs=64.6
Q ss_pred CCCCCcEEEEECCChhHHHHHHHHHHC-CCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecC
Q 022407 1 MEEKMKVMGVVGSGQMGSGIAQLGVMD-GLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSN 78 (297)
Q Consensus 1 M~~~~~~V~iiG~G~mG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 78 (297)
|..+..||+|||+|.||..++..+.+. +++|+ ++|+++++++.+.+ +.|. ....++
T Consensus 1 M~m~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~----------~~~~------------~~~~~~ 58 (330)
T 3e9m_A 1 MSLDKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAK----------ELAI------------PVAYGS 58 (330)
T ss_dssp --CCCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHH----------HTTC------------CCCBSS
T ss_pred CCCCeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHH----------HcCC------------CceeCC
Confidence 544557999999999999999999884 67776 88999887765521 1121 024566
Q ss_pred ccc-cc--CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHH
Q 022407 79 LKD-LH--SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISIT 126 (297)
Q Consensus 79 ~~~-~~--~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~ 126 (297)
+++ ++ ++|+|+.|+|...+.. .+...+.. ...+++....+.+.+
T Consensus 59 ~~~ll~~~~~D~V~i~tp~~~h~~-~~~~al~~---gk~vl~EKP~~~~~~ 105 (330)
T 3e9m_A 59 YEELCKDETIDIIYIPTYNQGHYS-AAKLALSQ---GKPVLLEKPFTLNAA 105 (330)
T ss_dssp HHHHHHCTTCSEEEECCCGGGHHH-HHHHHHHT---TCCEEECSSCCSSHH
T ss_pred HHHHhcCCCCCEEEEcCCCHHHHH-HHHHHHHC---CCeEEEeCCCCCCHH
Confidence 766 44 7999999999887632 22222222 234666555455553
No 185
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=98.22 E-value=1.2e-05 Score=70.78 Aligned_cols=98 Identities=16% Similarity=0.223 Sum_probs=65.2
Q ss_pred CCCCCcEEEEECCChhHHHHHHHHHHC-CCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecC
Q 022407 1 MEEKMKVMGVVGSGQMGSGIAQLGVMD-GLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSN 78 (297)
Q Consensus 1 M~~~~~~V~iiG~G~mG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 78 (297)
|.+ +.||+|||+|.||..++..|.+. +++|+ ++|+++++++...+ +.| ....++
T Consensus 1 M~~-~~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~----------~~g-------------~~~~~~ 56 (344)
T 3euw_A 1 MSL-TLRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAE----------ANG-------------AEAVAS 56 (344)
T ss_dssp --C-CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHH----------TTT-------------CEEESS
T ss_pred CCC-ceEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHH----------HcC-------------CceeCC
Confidence 543 36899999999999999999886 77766 89999988765411 112 246677
Q ss_pred ccc-cc--CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHH
Q 022407 79 LKD-LH--SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISIT 126 (297)
Q Consensus 79 ~~~-~~--~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~ 126 (297)
+++ ++ ++|+|+.|+|...+.. .+...+.. ...+++....+.+..
T Consensus 57 ~~~~l~~~~~D~V~i~tp~~~h~~-~~~~al~~---gk~v~~EKP~~~~~~ 103 (344)
T 3euw_A 57 PDEVFARDDIDGIVIGSPTSTHVD-LITRAVER---GIPALCEKPIDLDIE 103 (344)
T ss_dssp HHHHTTCSCCCEEEECSCGGGHHH-HHHHHHHT---TCCEEECSCSCSCHH
T ss_pred HHHHhcCCCCCEEEEeCCchhhHH-HHHHHHHc---CCcEEEECCCCCCHH
Confidence 776 55 7999999999877642 22222322 234666555455553
No 186
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=98.22 E-value=1.6e-05 Score=71.76 Aligned_cols=73 Identities=11% Similarity=0.129 Sum_probs=47.2
Q ss_pred CcEEEEECCChh-HHHHHHHHHH--C---CCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecC
Q 022407 5 MKVMGVVGSGQM-GSGIAQLGVM--D---GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSN 78 (297)
Q Consensus 5 ~~~V~iiG~G~m-G~~iA~~l~~--~---G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 78 (297)
.+||+|||+|.. +..+...|+. . +.+|.++|+++++++... .+.+.+ ... . .+++.++|
T Consensus 2 ~~KI~IIGaG~v~~~~l~~~l~~~~~~l~~~el~L~Di~~~~~~~~~-~~~~~~---~~~----------~-~~v~~t~d 66 (417)
T 1up7_A 2 HMRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVV-DFVKRL---VKD----------R-FKVLISDT 66 (417)
T ss_dssp CCEEEEETTTCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHH-HHHHHH---HTT----------S-SEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcccCCCcCEEEEEeCCHHHHHHHH-HHHHHH---hhC----------C-eEEEEeCC
Confidence 469999999985 2222233454 3 568999999998877532 222111 110 1 34666678
Q ss_pred c-ccccCCcEEEEec
Q 022407 79 L-KDLHSADIIVEAI 92 (297)
Q Consensus 79 ~-~~~~~aD~Vi~~v 92 (297)
+ +++++||+||.+.
T Consensus 67 ~~~al~~AD~Viita 81 (417)
T 1up7_A 67 FEGAVVDAKYVIFQF 81 (417)
T ss_dssp HHHHHTTCSEEEECC
T ss_pred HHHHhCCCCEEEEcC
Confidence 7 5599999999987
No 187
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=98.22 E-value=5.5e-06 Score=72.58 Aligned_cols=100 Identities=19% Similarity=0.204 Sum_probs=62.3
Q ss_pred CcEEEEEC-CChhHHHHHHHHHHCC--CcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEE---ecC
Q 022407 5 MKVMGVVG-SGQMGSGIAQLGVMDG--LDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRC---TSN 78 (297)
Q Consensus 5 ~~~V~iiG-~G~mG~~iA~~l~~~G--~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~---~~~ 78 (297)
.+||+|+| +|.+|..++..|+..| ++|+++|++++.. .+. . ...... ..++.. +++
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~-~~~--------d-L~~~~~--------~~~v~~~~~t~d 69 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPG-VTA--------D-ISHMDT--------GAVVRGFLGQQQ 69 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHH-HHH--------H-HHTSCS--------SCEEEEEESHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHh-HHH--------H-hhcccc--------cceEEEEeCCCC
Confidence 46999999 7999999999999999 8999999987611 110 0 111110 112333 335
Q ss_pred ccc-ccCCcEEEEecccC--H------------HHHHHHHHHHHhhccCCeEEeecCCCc
Q 022407 79 LKD-LHSADIIVEAIVES--E------------DVKKKLFSELDKITKASAILASNTSSI 123 (297)
Q Consensus 79 ~~~-~~~aD~Vi~~v~e~--~------------~~k~~~~~~l~~~~~~~~ii~s~ts~~ 123 (297)
+++ +++||+||.+.... . ...+.+.+.+.++.+ +.+++..|...
T Consensus 70 ~~~al~gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p-~~~viv~SNPv 128 (326)
T 1smk_A 70 LEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCP-RAIVNLISNPV 128 (326)
T ss_dssp HHHHHTTCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCT-TSEEEECCSSH
T ss_pred HHHHcCCCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CeEEEEECCch
Confidence 544 89999999987321 1 334455566777764 44444334433
No 188
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=98.22 E-value=3.4e-06 Score=77.09 Aligned_cols=96 Identities=22% Similarity=0.315 Sum_probs=65.7
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|+|||+|.||..+|..+...|.+|++||+++.....+ ...|. .. .++++ ++.
T Consensus 258 ktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a-----------~~~g~-------------~~-~~l~ell~~ 312 (479)
T 1v8b_A 258 KIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQA-----------VMEGF-------------NV-VTLDEIVDK 312 (479)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHH-----------HTTTC-------------EE-CCHHHHTTT
T ss_pred CEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHH-----------HHcCC-------------Ee-cCHHHHHhc
Confidence 689999999999999999999999999999998764332 22231 22 35555 889
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCC---ccHHHHhh
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSS---ISITRLAS 130 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~---~~~~~l~~ 130 (297)
||+|+.+.....-+. .+.-+.++++++|+..+.+ +....+.+
T Consensus 313 aDiVi~~~~t~~lI~----~~~l~~MK~gailiNvgrg~~EId~~aL~~ 357 (479)
T 1v8b_A 313 GDFFITCTGNVDVIK----LEHLLKMKNNAVVGNIGHFDDEIQVNELFN 357 (479)
T ss_dssp CSEEEECCSSSSSBC----HHHHTTCCTTCEEEECSSTTTSBCHHHHHT
T ss_pred CCEEEECCChhhhcC----HHHHhhcCCCcEEEEeCCCCccccchhhhc
Confidence 999999963222111 2333457888888743333 34456665
No 189
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.21 E-value=2e-06 Score=71.84 Aligned_cols=60 Identities=20% Similarity=0.400 Sum_probs=47.1
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcE-EEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-c-
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDV-WLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-L- 82 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~- 82 (297)
+||+|||+|.||..++..+.+.|++| .+||+++. .+ . ..+++++ +
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~~-~~-----------------------------~--~~~~~~~l~~ 48 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNGFEIAAILDVRGE-HE-----------------------------K--MVRGIDEFLQ 48 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC-CT-----------------------------T--EESSHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHhcCCCEEEEEEecCcc-hh-----------------------------h--hcCCHHHHhc
Confidence 48999999999999999999999997 69998742 10 0 3455655 5
Q ss_pred cCCcEEEEecccCHH
Q 022407 83 HSADIIVEAIVESED 97 (297)
Q Consensus 83 ~~aD~Vi~~v~e~~~ 97 (297)
.++|+|++|+|.+.+
T Consensus 49 ~~~DvVv~~~~~~~~ 63 (236)
T 2dc1_A 49 REMDVAVEAASQQAV 63 (236)
T ss_dssp SCCSEEEECSCHHHH
T ss_pred CCCCEEEECCCHHHH
Confidence 689999999996643
No 190
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=98.21 E-value=3.6e-06 Score=71.48 Aligned_cols=66 Identities=24% Similarity=0.352 Sum_probs=50.6
Q ss_pred EEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcccccCCc
Q 022407 7 VMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHSAD 86 (297)
Q Consensus 7 ~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~aD 86 (297)
+|+|||+|.||.+++..|.+.|++|+++|+++++.+.+.+. .+. . .+++++++++|
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~----------~~~-------------~-~~~~~~~~~~D 173 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEE----------FGL-------------R-AVPLEKAREAR 173 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH----------HTC-------------E-ECCGGGGGGCS
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----------hcc-------------c-hhhHhhccCCC
Confidence 79999999999999999999999999999999876654211 111 1 23333337899
Q ss_pred EEEEecccCH
Q 022407 87 IIVEAIVESE 96 (297)
Q Consensus 87 ~Vi~~v~e~~ 96 (297)
+||.|+|...
T Consensus 174 ivi~~tp~~~ 183 (263)
T 2d5c_A 174 LLVNATRVGL 183 (263)
T ss_dssp EEEECSSTTT
T ss_pred EEEEccCCCC
Confidence 9999998653
No 191
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.20 E-value=2.2e-06 Score=77.10 Aligned_cols=86 Identities=26% Similarity=0.285 Sum_probs=61.0
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|+|+|+|.+|.++|..|...|.+|+++|+++.+...+ ...|. .. .++++ ++.
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A-----------~~~G~-------------~~-~sL~eal~~ 266 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQA-----------AMEGY-------------QV-LLVEDVVEE 266 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-----------HHTTC-------------EE-CCHHHHTTT
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHH-----------HHhCC-------------ee-cCHHHHHhh
Confidence 689999999999999999999999999999998765443 23332 22 35665 889
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCC
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTS 121 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts 121 (297)
||+|+.+.....-+. .+.-+.++++++|+ |++
T Consensus 267 ADVVilt~gt~~iI~----~e~l~~MK~gAIVI-Nvg 298 (436)
T 3h9u_A 267 AHIFVTTTGNDDIIT----SEHFPRMRDDAIVC-NIG 298 (436)
T ss_dssp CSEEEECSSCSCSBC----TTTGGGCCTTEEEE-ECS
T ss_pred CCEEEECCCCcCccC----HHHHhhcCCCcEEE-EeC
Confidence 999998664322111 12234567888887 444
No 192
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=98.19 E-value=4.2e-06 Score=76.79 Aligned_cols=87 Identities=28% Similarity=0.357 Sum_probs=61.5
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|+|||+|.||..+|..+...|.+|++||+++.....+ ...|. .. .++++ ++.
T Consensus 278 ktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a-----------~~~G~-------------~~-~~l~ell~~ 332 (494)
T 3d64_A 278 KIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQA-----------AMEGY-------------RV-VTMEYAADK 332 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHH-----------HTTTC-------------EE-CCHHHHTTT
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHH-----------HHcCC-------------Ee-CCHHHHHhc
Confidence 689999999999999999999999999999998764222 12221 22 35555 889
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCC
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTS 121 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts 121 (297)
||+|+.++....-+. .+.-+.++++++|+....
T Consensus 333 aDiVi~~~~t~~lI~----~~~l~~MK~gAilINvgr 365 (494)
T 3d64_A 333 ADIFVTATGNYHVIN----HDHMKAMRHNAIVCNIGH 365 (494)
T ss_dssp CSEEEECSSSSCSBC----HHHHHHCCTTEEEEECSS
T ss_pred CCEEEECCCcccccC----HHHHhhCCCCcEEEEcCC
Confidence 999999983222111 233456788888874333
No 193
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=98.16 E-value=6.2e-06 Score=75.88 Aligned_cols=83 Identities=28% Similarity=0.346 Sum_probs=60.9
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|+|+|+|.+|..+|..+...|.+|+++|+++.+++.+ .+.|. .. .++++ +++
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A-----------~~~Ga-------------~~-~~l~e~l~~ 329 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQA-----------MMEGF-------------DV-VTVEEAIGD 329 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-----------HHTTC-------------EE-CCHHHHGGG
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----------HHcCC-------------EE-ecHHHHHhC
Confidence 689999999999999999999999999999999876654 33342 11 23334 789
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEe
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILA 117 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~ 117 (297)
+|+||++++....+.. +..+.++++.+++
T Consensus 330 aDvVi~atgt~~~i~~----~~l~~mk~ggilv 358 (494)
T 3ce6_A 330 ADIVVTATGNKDIIML----EHIKAMKDHAILG 358 (494)
T ss_dssp CSEEEECSSSSCSBCH----HHHHHSCTTCEEE
T ss_pred CCEEEECCCCHHHHHH----HHHHhcCCCcEEE
Confidence 9999999875442221 2334567777766
No 194
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=98.14 E-value=1.2e-05 Score=71.40 Aligned_cols=98 Identities=21% Similarity=0.272 Sum_probs=63.1
Q ss_pred CCCCCcEEEEECCChhHHHHHHHHHHC-CCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecC
Q 022407 1 MEEKMKVMGVVGSGQMGSGIAQLGVMD-GLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSN 78 (297)
Q Consensus 1 M~~~~~~V~iiG~G~mG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 78 (297)
|.++..||+|||+|.||...+..+.+. +++|. ++|+++++.+.+ .+.| +...+|
T Consensus 1 M~m~~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a-----------~~~g-------------~~~~~~ 56 (359)
T 3e18_A 1 MSLKKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAA-----------AQKG-------------LKIYES 56 (359)
T ss_dssp --CCCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHH-----------HTTT-------------CCBCSC
T ss_pred CCCCcCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHH-----------HhcC-------------CceeCC
Confidence 544456999999999999999988876 77775 789998876432 1222 234567
Q ss_pred ccc-cc--CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHH
Q 022407 79 LKD-LH--SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISIT 126 (297)
Q Consensus 79 ~~~-~~--~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~ 126 (297)
+++ ++ +.|+|+.|+|...+.. .+...+.. ...+++.-..+.+.+
T Consensus 57 ~~~ll~~~~~D~V~i~tp~~~h~~-~~~~al~a---GkhVl~EKP~a~~~~ 103 (359)
T 3e18_A 57 YEAVLADEKVDAVLIATPNDSHKE-LAISALEA---GKHVVCEKPVTMTSE 103 (359)
T ss_dssp HHHHHHCTTCCEEEECSCGGGHHH-HHHHHHHT---TCEEEEESSCCSSHH
T ss_pred HHHHhcCCCCCEEEEcCCcHHHHH-HHHHHHHC---CCCEEeeCCCcCCHH
Confidence 776 44 7899999999877532 22222322 234666544455543
No 195
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=98.13 E-value=1e-05 Score=72.28 Aligned_cols=153 Identities=18% Similarity=0.206 Sum_probs=93.9
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcccccCC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHSA 85 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~a 85 (297)
++|+|||.|..|.+-|.+|..+|.+|++--|.....+. . +.+++..+.|. ++.+-.+.++.|
T Consensus 38 K~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~-~----~S~~~A~~~Gf-------------~v~~~~eA~~~A 99 (491)
T 3ulk_A 38 KKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEK-R----ASWRKATENGF-------------KVGTYEELIPQA 99 (491)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTT-C----HHHHHHHHTTC-------------EEEEHHHHGGGC
T ss_pred CEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCcccc-c----chHHHHHHCCC-------------EecCHHHHHHhC
Confidence 79999999999999999999999999988764321111 0 11122244553 455444458999
Q ss_pred cEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHHHHhhhcCCCCeEEEeecCCCCCC----------Cc-cee
Q 022407 86 DIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPPPL----------MK-LVE 154 (297)
Q Consensus 86 D~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~~l~~~~~~~~~~~g~h~~~p~~~----------~~-~ve 154 (297)
|+|+..+|+.. ...++.+|.+.++++..+.. +.+..+..-.-..+....++-+.|-.|-+. .| ++-
T Consensus 100 DvV~~L~PD~~--q~~vy~~I~p~lk~G~~L~f-aHGFnI~~~~i~pp~dvdVimVAPKgpG~~VR~~y~~G~GvP~liA 176 (491)
T 3ulk_A 100 DLVINLTPDKQ--HSDVVRTVQPLMKDGAALGY-SHGFNIVEVGEQIRKDITVVMVAPKCPGTEVREEYKRGFGVPTLIA 176 (491)
T ss_dssp SEEEECSCGGG--HHHHHHHHGGGSCTTCEEEE-SSCHHHHTTCCCCCTTSEEEEEEESSCHHHHHHHHHTTCCCCEEEE
T ss_pred CEEEEeCChhh--HHHHHHHHHhhCCCCCEEEe-cCcccccccccccCCCcceEEeCCCCCcHHHHHHHHcCCCCceEEE
Confidence 99999999765 45678899999999887774 344444321111122234444444333221 11 233
Q ss_pred EecCCCChHHHHHHHHHHHHHhCCe
Q 022407 155 VIRGADTSDETFRATKALAERFGKT 179 (297)
Q Consensus 155 v~~~~~~~~~~~~~~~~l~~~lG~~ 179 (297)
|..-...+-.+.+.+..+...+|..
T Consensus 177 VhqeqD~sG~a~~~AlayA~aiG~~ 201 (491)
T 3ulk_A 177 VHPENDPKGEGMAIAKAWAAATGGH 201 (491)
T ss_dssp ECGGGCTTSCHHHHHHHHHHHHTGG
T ss_pred EEeCCCCchhHHHHHHHHHHhcCCC
Confidence 3211223445677778888888864
No 196
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=98.11 E-value=1.9e-05 Score=69.17 Aligned_cols=94 Identities=14% Similarity=0.154 Sum_probs=63.3
Q ss_pred CcEEEEECCChhHHHHHHHHHHC-CCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMD-GLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD- 81 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~- 81 (297)
+.||+|||+|.||..++..+.+. +++|. ++|+++++++.+.+ +.| +. .+++++
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~----------~~~-------------~~-~~~~~~~ 58 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAG----------AYG-------------CE-VRTIDAI 58 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHH----------HTT-------------CE-ECCHHHH
T ss_pred ceEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHH----------HhC-------------CC-cCCHHHH
Confidence 36899999999999999999885 78876 89999988765521 112 23 566666
Q ss_pred cc--CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHH
Q 022407 82 LH--SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISIT 126 (297)
Q Consensus 82 ~~--~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~ 126 (297)
++ ++|+|+.|+|...+.. .+...+.. ...+++....+.+.+
T Consensus 59 l~~~~~D~V~i~tp~~~h~~-~~~~al~~---gk~v~~EKP~~~~~~ 101 (331)
T 4hkt_A 59 EAAADIDAVVICTPTDTHAD-LIERFARA---GKAIFCEKPIDLDAE 101 (331)
T ss_dssp HHCTTCCEEEECSCGGGHHH-HHHHHHHT---TCEEEECSCSCSSHH
T ss_pred hcCCCCCEEEEeCCchhHHH-HHHHHHHc---CCcEEEecCCCCCHH
Confidence 54 7999999999877632 22222222 234665555455554
No 197
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=98.11 E-value=7.3e-06 Score=71.52 Aligned_cols=74 Identities=16% Similarity=0.115 Sum_probs=50.8
Q ss_pred CCCCCcEEEEECCChhHHH-HHHHHHH-CCCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEec
Q 022407 1 MEEKMKVMGVVGSGQMGSG-IAQLGVM-DGLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTS 77 (297)
Q Consensus 1 M~~~~~~V~iiG~G~mG~~-iA~~l~~-~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 77 (297)
|.++..||+|||+|.||.. ++..+.+ .|++|. ++|+++++.+.+.+ +.|. ...+
T Consensus 1 m~m~~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~----------~~g~-------------~~~~ 57 (319)
T 1tlt_A 1 MSLKKLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICE----------SWRI-------------PYAD 57 (319)
T ss_dssp ----CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHH----------HHTC-------------CBCS
T ss_pred CCCCcceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHH----------HcCC-------------CccC
Confidence 5545579999999999997 8887776 477876 99999987665421 1121 1344
Q ss_pred Ccccc-cCCcEEEEecccCHH
Q 022407 78 NLKDL-HSADIIVEAIVESED 97 (297)
Q Consensus 78 ~~~~~-~~aD~Vi~~v~e~~~ 97 (297)
+++++ .++|+|+.|+|...+
T Consensus 58 ~~~~l~~~~D~V~i~tp~~~h 78 (319)
T 1tlt_A 58 SLSSLAASCDAVFVHSSTASH 78 (319)
T ss_dssp SHHHHHTTCSEEEECSCTTHH
T ss_pred cHHHhhcCCCEEEEeCCchhH
Confidence 55553 679999999998765
No 198
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=98.10 E-value=1.4e-05 Score=70.76 Aligned_cols=98 Identities=11% Similarity=0.119 Sum_probs=64.8
Q ss_pred CCCCCcEEEEECCChhHHHHHHHHHHC-CCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecC
Q 022407 1 MEEKMKVMGVVGSGQMGSGIAQLGVMD-GLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSN 78 (297)
Q Consensus 1 M~~~~~~V~iiG~G~mG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 78 (297)
|++ ..||+|||+|.||..++..+.+. +++|+ ++|+++++++...+. .|. ...++
T Consensus 2 M~~-~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~----------~g~-------------~~~~~ 57 (354)
T 3db2_A 2 MYN-PVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKR----------YNC-------------AGDAT 57 (354)
T ss_dssp CCC-CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHH----------HTC-------------CCCSS
T ss_pred CCC-cceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHH----------cCC-------------CCcCC
Confidence 433 36899999999999999999876 78855 889999887665211 121 23566
Q ss_pred ccc-c--cCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHH
Q 022407 79 LKD-L--HSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISIT 126 (297)
Q Consensus 79 ~~~-~--~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~ 126 (297)
+++ + .++|+|+.|+|...+.. .+...+.. ...+++....+...+
T Consensus 58 ~~~~l~~~~~D~V~i~tp~~~h~~-~~~~al~~---gk~vl~EKP~~~~~~ 104 (354)
T 3db2_A 58 MEALLAREDVEMVIITVPNDKHAE-VIEQCARS---GKHIYVEKPISVSLD 104 (354)
T ss_dssp HHHHHHCSSCCEEEECSCTTSHHH-HHHHHHHT---TCEEEEESSSCSSHH
T ss_pred HHHHhcCCCCCEEEEeCChHHHHH-HHHHHHHc---CCEEEEccCCCCCHH
Confidence 666 4 57999999999877632 22222222 234666555555543
No 199
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=98.10 E-value=2e-06 Score=76.28 Aligned_cols=39 Identities=18% Similarity=0.105 Sum_probs=36.5
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
.+|+|||+|.||..+|..+...|.+|+++|+++++++.+
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~ 223 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQV 223 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHH
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 689999999999999999999999999999999887766
No 200
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=98.09 E-value=1e-05 Score=72.86 Aligned_cols=88 Identities=27% Similarity=0.337 Sum_probs=61.6
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|+|||+|.+|..+|..+...|.+|+++|+++.....+ ...|. .+ .++++ ++.
T Consensus 248 KTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A-----------~~~G~-------------~v-v~LeElL~~ 302 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQA-----------AMDGF-------------EV-VTLDDAAST 302 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHH-----------HHTTC-------------EE-CCHHHHGGG
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHH-----------HhcCc-------------ee-ccHHHHHhh
Confidence 689999999999999999999999999999998754332 22232 22 24555 889
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCc
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSI 123 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~ 123 (297)
||+|+.+.....-+. .+.-+.++++++++ |++..
T Consensus 303 ADIVv~atgt~~lI~----~e~l~~MK~GAILI-NvGRg 336 (464)
T 3n58_A 303 ADIVVTTTGNKDVIT----IDHMRKMKDMCIVG-NIGHF 336 (464)
T ss_dssp CSEEEECCSSSSSBC----HHHHHHSCTTEEEE-ECSSS
T ss_pred CCEEEECCCCccccC----HHHHhcCCCCeEEE-EcCCC
Confidence 999999864322111 23334568888887 55543
No 201
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=98.08 E-value=5.4e-05 Score=68.39 Aligned_cols=93 Identities=18% Similarity=0.253 Sum_probs=63.6
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEe--cC---c
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCT--SN---L 79 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~--~~---~ 79 (297)
.++|.|+|+|.+|..+|..|...|++|+++|.++++++.+ .+.|.. +... ++ +
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~-----------~~~g~~-----------vi~GDat~~~~L 61 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETL-----------RKFGMK-----------VFYGDATRMDLL 61 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHH-----------HHTTCC-----------CEESCTTCHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHH-----------HhCCCe-----------EEEcCCCCHHHH
Confidence 3579999999999999999999999999999999988776 333321 1111 11 1
Q ss_pred c-c-ccCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecC
Q 022407 80 K-D-LHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNT 120 (297)
Q Consensus 80 ~-~-~~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~t 120 (297)
. . +.+||+||.+++++.. ...+...+.++.+.-.||+...
T Consensus 62 ~~agi~~A~~viv~~~~~~~-n~~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 62 ESAGAAKAEVLINAIDDPQT-NLQLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp HHTTTTTCSEEEECCSSHHH-HHHHHHHHHHHCTTCEEEEEES
T ss_pred HhcCCCccCEEEECCCChHH-HHHHHHHHHHhCCCCeEEEEEC
Confidence 1 2 6789999999987553 3333344444444445666443
No 202
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=98.08 E-value=0.0001 Score=56.91 Aligned_cols=39 Identities=13% Similarity=0.067 Sum_probs=34.0
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCC-HHHHHHH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTD-PDALVRA 44 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~-~~~~~~~ 44 (297)
++|.|+|+|.+|..++..|.+.|++|+++|++ +++.+.+
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~ 43 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQL 43 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHH
Confidence 58999999999999999999999999999997 4544443
No 203
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=98.08 E-value=1.5e-05 Score=69.19 Aligned_cols=95 Identities=7% Similarity=0.059 Sum_probs=62.6
Q ss_pred CcEEEEECCChhHHH-HHHHHHH-CCCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc
Q 022407 5 MKVMGVVGSGQMGSG-IAQLGVM-DGLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD 81 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~-iA~~l~~-~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 81 (297)
..||+|||+|.||.. ++..+.+ .++++. ++|+++++++.+.+ +.|. ...+++++
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~----------~~~~-------------~~~~~~~~ 62 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICS----------DYRI-------------MPFDSIES 62 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHH----------HHTC-------------CBCSCHHH
T ss_pred cCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHH----------HcCC-------------CCcCCHHH
Confidence 369999999999996 8887876 477877 89999998776521 1121 12566666
Q ss_pred -ccCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHH
Q 022407 82 -LHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISIT 126 (297)
Q Consensus 82 -~~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~ 126 (297)
++++|+|+.|+|...+.. .+...+.. ...+++.-..+.+.+
T Consensus 63 ll~~~D~V~i~tp~~~h~~-~~~~al~~---gk~vl~EKP~~~~~~ 104 (308)
T 3uuw_A 63 LAKKCDCIFLHSSTETHYE-IIKILLNL---GVHVYVDKPLASTVS 104 (308)
T ss_dssp HHTTCSEEEECCCGGGHHH-HHHHHHHT---TCEEEECSSSSSSHH
T ss_pred HHhcCCEEEEeCCcHhHHH-HHHHHHHC---CCcEEEcCCCCCCHH
Confidence 669999999999887632 22222222 233565445555543
No 204
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=98.07 E-value=7.6e-06 Score=69.41 Aligned_cols=66 Identities=20% Similarity=0.185 Sum_probs=51.1
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcccccCC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHSA 85 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~a 85 (297)
++|.|||+|.||++++..|++.|.+|++++|++++.+.+. . .+. ... +++++.++
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~----------~~~-------------~~~-~~~~l~~~ 173 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-R----------LGC-------------DCF-MEPPKSAF 173 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-H----------HTC-------------EEE-SSCCSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-H----------CCC-------------eEe-cHHHhccC
Confidence 6899999999999999999999999999999998877652 1 111 121 34445589
Q ss_pred cEEEEecccCH
Q 022407 86 DIIVEAIVESE 96 (297)
Q Consensus 86 D~Vi~~v~e~~ 96 (297)
|+||.|+|-..
T Consensus 174 DiVInaTp~Gm 184 (269)
T 3phh_A 174 DLIINATSASL 184 (269)
T ss_dssp SEEEECCTTCC
T ss_pred CEEEEcccCCC
Confidence 99999987543
No 205
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=98.06 E-value=1.4e-05 Score=73.38 Aligned_cols=75 Identities=16% Similarity=0.289 Sum_probs=50.5
Q ss_pred cEEEEECCChhHHHHH--HHHHH----C--CCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEec
Q 022407 6 KVMGVVGSGQMGSGIA--QLGVM----D--GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTS 77 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA--~~l~~----~--G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 77 (297)
+||+|||+|..|.... ..++. . +.+|.++|+++++++......++..+. .| ..-+++.++
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~ei~L~Di~~~rl~~~~~~~~~~~~~---~~---------~~~~i~~t~ 68 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQTDELSREDTHIYLMDVHERRLNASYILARKYVEE---LN---------SPVKVVKTE 68 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCTTTCSTTCEEEEECSCHHHHHHHHHHHHHHHHH---HT---------CCCEEEEES
T ss_pred CEEEEECCCchhhHHHHHHHHHhhHhcCCCCCEEEEECCCHHHHHHHHHHHHHHHHH---cC---------CCeEEEEeC
Confidence 4899999999886532 22332 2 347999999999887654444433322 11 123467788
Q ss_pred Cccc-ccCCcEEEEec
Q 022407 78 NLKD-LHSADIIVEAI 92 (297)
Q Consensus 78 ~~~~-~~~aD~Vi~~v 92 (297)
|..+ +++||+||.++
T Consensus 69 d~~eAl~gAD~Vi~~~ 84 (477)
T 3u95_A 69 SLDEAIEGADFIINTA 84 (477)
T ss_dssp CHHHHHTTCSEEEECC
T ss_pred CHHHHhCCCCEEEECc
Confidence 8876 89999999885
No 206
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=98.06 E-value=1.2e-05 Score=69.83 Aligned_cols=101 Identities=18% Similarity=0.268 Sum_probs=60.7
Q ss_pred cEEEEEC-CChhHHHHHHHHHHC-C--CcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEE---ecC
Q 022407 6 KVMGVVG-SGQMGSGIAQLGVMD-G--LDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRC---TSN 78 (297)
Q Consensus 6 ~~V~iiG-~G~mG~~iA~~l~~~-G--~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~---~~~ 78 (297)
+||+||| +|.+|.+++..|+.. + .++.++|+++ +++.. .++ ..... ...+++. +++
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~------a~D--l~~~~--------~~~~v~~~~~~~~ 63 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGV------AVD--LSHIP--------TAVKIKGFSGEDA 63 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHH------HHH--HHTSC--------SSEEEEEECSSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhH------HHH--hhCCC--------CCceEEEecCCCc
Confidence 5899999 899999999999875 5 5899999987 33211 111 11111 0112332 245
Q ss_pred cccccCCcEEEEecccC--------------HHHHHHHHHHHHhhccCCeEEeecCCCcc
Q 022407 79 LKDLHSADIIVEAIVES--------------EDVKKKLFSELDKITKASAILASNTSSIS 124 (297)
Q Consensus 79 ~~~~~~aD~Vi~~v~e~--------------~~~k~~~~~~l~~~~~~~~ii~s~ts~~~ 124 (297)
++++++||+||.+...+ ..+.+++...+.++++ +++++.-|....
T Consensus 64 ~~~~~~aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p-~a~vlvvtNPvd 122 (312)
T 3hhp_A 64 TPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCP-KACIGIITNPVN 122 (312)
T ss_dssp HHHHTTCSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCT-TSEEEECSSCHH
T ss_pred HHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC-CcEEEEecCcch
Confidence 66799999999986321 1233444555777765 444443444333
No 207
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=98.06 E-value=3.9e-06 Score=70.74 Aligned_cols=38 Identities=21% Similarity=0.369 Sum_probs=34.7
Q ss_pred EEEEECCChhHHHHHHHHHHCCC-cEEEEeCCHHHHHHH
Q 022407 7 VMGVVGSGQMGSGIAQLGVMDGL-DVWLVDTDPDALVRA 44 (297)
Q Consensus 7 ~V~iiG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~ 44 (297)
+|+|||+|.||++++..|++.|. +|++++|++++++++
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~l 148 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKAL 148 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTC
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence 79999999999999999999998 999999999876543
No 208
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=98.05 E-value=4.3e-05 Score=66.75 Aligned_cols=70 Identities=14% Similarity=0.197 Sum_probs=52.5
Q ss_pred cEEEEECCChhHHHHHHHHHHC-CCcE-EEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-c
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMD-GLDV-WLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-L 82 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~-G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~ 82 (297)
.||+|||+|.||..++..+.+. ++++ .++|+++++.+.+ .+. .+.....+++++ +
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~-----------~~~-----------~~~~~~~~~~~~~l 59 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATF-----------ASR-----------YQNIQLFDQLEVFF 59 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHH-----------GGG-----------SSSCEEESCHHHHH
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHH-----------HHH-----------cCCCeEeCCHHHHh
Confidence 5899999999999999998876 5675 4899998876543 111 011245677776 5
Q ss_pred -cCCcEEEEecccCHH
Q 022407 83 -HSADIIVEAIVESED 97 (297)
Q Consensus 83 -~~aD~Vi~~v~e~~~ 97 (297)
.++|+|++|+|...+
T Consensus 60 ~~~~D~V~i~tp~~~h 75 (325)
T 2ho3_A 60 KSSFDLVYIASPNSLH 75 (325)
T ss_dssp TSSCSEEEECSCGGGH
T ss_pred CCCCCEEEEeCChHHH
Confidence 689999999997765
No 209
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=98.05 E-value=3.7e-06 Score=73.80 Aligned_cols=112 Identities=23% Similarity=0.334 Sum_probs=75.7
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|||||+|.+|+.+|..+..-|.+|..||+.+.... .+.+. ...++++ ++.
T Consensus 142 ~tvGIiG~G~IG~~va~~~~~fg~~v~~~d~~~~~~~-------------~~~~~--------------~~~~l~ell~~ 194 (334)
T 3kb6_A 142 LTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKREDL-------------KEKGC--------------VYTSLDELLKE 194 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHH-------------HHTTC--------------EECCHHHHHHH
T ss_pred cEEEEECcchHHHHHHHhhcccCceeeecCCccchhh-------------hhcCc--------------eecCHHHHHhh
Confidence 6899999999999999999999999999998754321 11221 2345666 899
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCc---cHHHHhhhcCCC-CeEEEeecCC
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSI---SITRLASATSRP-CQVIGMHFMN 145 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~---~~~~l~~~~~~~-~~~~g~h~~~ 145 (297)
||+|+.++|-..+-+.-+-++.-+.++++++++ |++-= .-..+.+.+... -.-.++..|.
T Consensus 195 sDivslh~Plt~~T~~li~~~~l~~mk~~a~lI-N~aRG~iVde~aL~~aL~~g~i~gA~LDV~~ 258 (334)
T 3kb6_A 195 SDVISLHVPYTKETHHMINEERISLMKDGVYLI-NTARGKVVDTDALYRAYQRGKFSGLGLDVFE 258 (334)
T ss_dssp CSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEE-ECSCGGGBCHHHHHHHHHTTCEEEEEESCCT
T ss_pred CCEEEEcCCCChhhccCcCHHHHhhcCCCeEEE-ecCccccccHHHHHHHHHhCCceEEEEeCCC
Confidence 999999998766533322234445678898887 56532 335677776432 2234455443
No 210
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=98.05 E-value=3.4e-06 Score=75.45 Aligned_cols=39 Identities=23% Similarity=0.161 Sum_probs=36.5
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
.+|+|||+|.+|..+|..+...|.+|+++|+++++++.+
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~ 229 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQV 229 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 689999999999999999999999999999999887765
No 211
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=98.05 E-value=1.1e-05 Score=67.55 Aligned_cols=86 Identities=20% Similarity=0.301 Sum_probs=55.7
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccccc
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLH 83 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 83 (297)
++||+|+|+|.||+.++..+.+.++++. ++|++++. ..| +.+.++++++.
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~~~----------------~~g-------------v~v~~dl~~l~ 53 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKA----------------TTP-------------YQQYQHIADVK 53 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC------------------CC-------------SCBCSCTTTCT
T ss_pred ceEEEEECcCHHHHHHHHHHHhCCCEEEEEEecCccc----------------cCC-------------CceeCCHHHHh
Confidence 4799999999999999999998877755 57887651 112 24567777733
Q ss_pred CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHH
Q 022407 84 SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISIT 126 (297)
Q Consensus 84 ~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~ 126 (297)
++|+||++...+ .+...+. +..+.-+++.|.+++.+
T Consensus 54 ~~DVvIDft~p~-----a~~~~~~--l~~g~~vVigTTG~s~e 89 (243)
T 3qy9_A 54 GADVAIDFSNPN-----LLFPLLD--EDFHLPLVVATTGEKEK 89 (243)
T ss_dssp TCSEEEECSCHH-----HHHHHHT--SCCCCCEEECCCSSHHH
T ss_pred CCCEEEEeCChH-----HHHHHHH--HhcCCceEeCCCCCCHH
Confidence 999999765321 2222333 44444344456677654
No 212
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=98.04 E-value=2e-05 Score=69.41 Aligned_cols=95 Identities=14% Similarity=0.222 Sum_probs=63.0
Q ss_pred cEEEEECCChhHHHHHHHHHHC-CCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-c
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMD-GLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-L 82 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~ 82 (297)
.||+|||+|.||..++..+.+. +++++ ++|+++++++.+.+. .|. ....+++++ +
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~----------~~~------------~~~~~~~~~ll 60 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEK----------LGV------------EKAYKDPHELI 60 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHH----------HTC------------SEEESSHHHHH
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHH----------hCC------------CceeCCHHHHh
Confidence 5899999999999999998874 67766 889999887665221 121 135677776 5
Q ss_pred c--CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHH
Q 022407 83 H--SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISIT 126 (297)
Q Consensus 83 ~--~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~ 126 (297)
+ ++|+|+.|+|...+.. .+...+.. ...+++.-..+.+..
T Consensus 61 ~~~~~D~V~i~tp~~~h~~-~~~~al~~---gk~v~~EKP~~~~~~ 102 (344)
T 3ezy_A 61 EDPNVDAVLVCSSTNTHSE-LVIACAKA---KKHVFCEKPLSLNLA 102 (344)
T ss_dssp HCTTCCEEEECSCGGGHHH-HHHHHHHT---TCEEEEESCSCSCHH
T ss_pred cCCCCCEEEEcCCCcchHH-HHHHHHhc---CCeEEEECCCCCCHH
Confidence 4 7999999999877532 22222222 234665544455553
No 213
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.02 E-value=1.4e-05 Score=70.65 Aligned_cols=95 Identities=17% Similarity=0.212 Sum_probs=62.1
Q ss_pred CcEEEEECCChhHHHHHHHHHH--CCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVM--DGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD- 81 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~--~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~- 81 (297)
.++|+|||+|.||..++..|.. ...+|++|||++++.+++.+.+.. ..|. .+...+++++
T Consensus 129 ~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~------~~g~-----------~~~~~~~~~ea 191 (350)
T 1x7d_A 129 ARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKE------YSGL-----------TIRRASSVAEA 191 (350)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTT------CTTC-----------EEEECSSHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHh------ccCc-----------eEEEeCCHHHH
Confidence 4689999999999999988753 356899999999988776432210 0010 1344566665
Q ss_pred ccCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecC
Q 022407 82 LHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNT 120 (297)
Q Consensus 82 ~~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~t 120 (297)
+++||+||.|+|.... ..++. .+.+++++.|...+
T Consensus 192 v~~aDiVi~aTps~~~--~pvl~--~~~l~~G~~V~~vg 226 (350)
T 1x7d_A 192 VKGVDIITTVTADKAY--ATIIT--PDMLEPGMHLNAVG 226 (350)
T ss_dssp HTTCSEEEECCCCSSE--EEEEC--GGGCCTTCEEEECS
T ss_pred HhcCCEEEEeccCCCC--Cceec--HHHcCCCCEEEECC
Confidence 7899999999997520 01111 13556666655433
No 214
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=98.01 E-value=4.9e-06 Score=74.00 Aligned_cols=75 Identities=15% Similarity=0.189 Sum_probs=52.0
Q ss_pred CCcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-c
Q 022407 4 KMKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-L 82 (297)
Q Consensus 4 ~~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~ 82 (297)
+.++|+|||+|.||+.++..|++. ++|+++||++++++++ .+.... ...+ +.-.+++++ +
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~a~~l-----------a~~~~~------~~~d-~~~~~~l~~ll 75 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNENLEKV-----------KEFATP------LKVD-ASNFDKLVEVM 75 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHHHHHH-----------TTTSEE------EECC-TTCHHHHHHHH
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHHHHHH-----------HhhCCe------EEEe-cCCHHHHHHHH
Confidence 347999999999999999999998 9999999999987765 111100 0000 000122333 6
Q ss_pred cCCcEEEEecccCHH
Q 022407 83 HSADIIVEAIVESED 97 (297)
Q Consensus 83 ~~aD~Vi~~v~e~~~ 97 (297)
+++|+||.|+|...+
T Consensus 76 ~~~DvVIn~~P~~~~ 90 (365)
T 2z2v_A 76 KEFELVIGALPGFLG 90 (365)
T ss_dssp TTCSCEEECCCHHHH
T ss_pred hCCCEEEECCChhhh
Confidence 789999999986543
No 215
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=98.01 E-value=6.3e-06 Score=71.24 Aligned_cols=40 Identities=18% Similarity=0.126 Sum_probs=36.6
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCC-cEEEEeCCHHHHHHH
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGL-DVWLVDTDPDALVRA 44 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~ 44 (297)
-++|.|||+|.||++++..|++.|. +|++++|++++++.+
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~l 181 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERL 181 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHH
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence 3689999999999999999999998 999999999887665
No 216
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=98.00 E-value=9e-06 Score=70.71 Aligned_cols=92 Identities=24% Similarity=0.246 Sum_probs=60.8
Q ss_pred CCcEEEEECCChhHHHHHHHHHH-C-CCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc
Q 022407 4 KMKVMGVVGSGQMGSGIAQLGVM-D-GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD 81 (297)
Q Consensus 4 ~~~~V~iiG~G~mG~~iA~~l~~-~-G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 81 (297)
..++|+|||+|.||..++..|.. . ..+|++|||+ +.+++.+.++.. .|. .+... ++++
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~--~a~~la~~l~~~------~g~-----------~~~~~-~~~e 179 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY--ASPEILERIGRR------CGV-----------PARMA-APAD 179 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT--CCHHHHHHHHHH------HTS-----------CEEEC-CHHH
T ss_pred CCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc--HHHHHHHHHHHh------cCC-----------eEEEe-CHHH
Confidence 35789999999999999999876 3 4689999999 444443332211 121 12344 6665
Q ss_pred -ccCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCC
Q 022407 82 -LHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTS 121 (297)
Q Consensus 82 -~~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts 121 (297)
+++||+||.|+|.... ++. .+++++++.|....|
T Consensus 180 av~~aDIVi~aT~s~~p----vl~--~~~l~~G~~V~~vGs 214 (313)
T 3hdj_A 180 IAAQADIVVTATRSTTP----LFA--GQALRAGAFVGAIGS 214 (313)
T ss_dssp HHHHCSEEEECCCCSSC----SSC--GGGCCTTCEEEECCC
T ss_pred HHhhCCEEEEccCCCCc----ccC--HHHcCCCcEEEECCC
Confidence 7899999999986432 221 245677777664444
No 217
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=97.99 E-value=4.1e-05 Score=67.67 Aligned_cols=95 Identities=14% Similarity=0.068 Sum_probs=62.4
Q ss_pred CcEEEEECCChhHH-HHHHHHHHC-CCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc
Q 022407 5 MKVMGVVGSGQMGS-GIAQLGVMD-GLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD 81 (297)
Q Consensus 5 ~~~V~iiG~G~mG~-~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 81 (297)
..||+|||+|.||. .++..+.+. +++|+ ++|+++++.+.+.+. .| +...+++++
T Consensus 27 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~----------~g-------------~~~~~~~~~ 83 (350)
T 3rc1_A 27 PIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTER----------FG-------------GEPVEGYPA 83 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHH----------HC-------------SEEEESHHH
T ss_pred ceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHH----------cC-------------CCCcCCHHH
Confidence 46899999999998 788888877 77876 889999877654211 12 134467776
Q ss_pred -cc--CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHH
Q 022407 82 -LH--SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISIT 126 (297)
Q Consensus 82 -~~--~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~ 126 (297)
++ +.|+|+.|+|...+.. .+...++. ...+++--..+...+
T Consensus 84 ll~~~~~D~V~i~tp~~~h~~-~~~~al~a---Gk~Vl~EKP~a~~~~ 127 (350)
T 3rc1_A 84 LLERDDVDAVYVPLPAVLHAE-WIDRALRA---GKHVLAEKPLTTDRP 127 (350)
T ss_dssp HHTCTTCSEEEECCCGGGHHH-HHHHHHHT---TCEEEEESSSCSSHH
T ss_pred HhcCCCCCEEEECCCcHHHHH-HHHHHHHC---CCcEEEeCCCCCCHH
Confidence 43 5899999999887642 22222322 233665444455543
No 218
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=97.99 E-value=2.6e-05 Score=70.05 Aligned_cols=85 Identities=26% Similarity=0.386 Sum_probs=59.4
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|+|+|+|.+|..+|..+...|.+|+++|+++.+...+ ...|. .. .++++ ++.
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A-----------~~~G~-------------~v-~~Leeal~~ 275 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQA-----------CMDGF-------------RL-VKLNEVIRQ 275 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-----------HHTTC-------------EE-CCHHHHTTT
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHH-----------HHcCC-------------Ee-ccHHHHHhc
Confidence 689999999999999999999999999999998754433 22231 12 34555 889
Q ss_pred CcEEEEecccCHH-HHHHHHHHHHhhccCCeEEeecCC
Q 022407 85 ADIIVEAIVESED-VKKKLFSELDKITKASAILASNTS 121 (297)
Q Consensus 85 aD~Vi~~v~e~~~-~k~~~~~~l~~~~~~~~ii~s~ts 121 (297)
+|+|+.| +.... +.. +.-+.++++++++ |++
T Consensus 276 ADIVi~a-tgt~~lI~~----e~l~~MK~gailI-Nvg 307 (435)
T 3gvp_A 276 VDIVITC-TGNKNVVTR----EHLDRMKNSCIVC-NMG 307 (435)
T ss_dssp CSEEEEC-SSCSCSBCH----HHHHHSCTTEEEE-ECS
T ss_pred CCEEEEC-CCCcccCCH----HHHHhcCCCcEEE-Eec
Confidence 9999997 33222 112 2234567788776 444
No 219
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=97.98 E-value=6.4e-05 Score=66.15 Aligned_cols=70 Identities=21% Similarity=0.238 Sum_probs=52.1
Q ss_pred CcEEEEECCChhHHHHHHHHH-H-CCCcE-EEEeCCHHHHHHHHHHHHHHHHHHHHc-CCCChhhhcccCCceEEecCcc
Q 022407 5 MKVMGVVGSGQMGSGIAQLGV-M-DGLDV-WLVDTDPDALVRATKSISSSIQKFVSK-GQLSQAMGTDAPRRLRCTSNLK 80 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~-~-~G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~i~~~~~~~ 80 (297)
..||+|||+|.||..++..+. + .|++| .++|+++++++.+ .+. |. ....++++
T Consensus 8 ~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~-----------a~~~g~------------~~~~~~~~ 64 (346)
T 3cea_A 8 PLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWA-----------KNELGV------------ETTYTNYK 64 (346)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHH-----------HHTTCC------------SEEESCHH
T ss_pred cceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHH-----------HHHhCC------------CcccCCHH
Confidence 469999999999999999988 4 47774 5889999877654 221 21 13456676
Q ss_pred c-cc--CCcEEEEecccCHH
Q 022407 81 D-LH--SADIIVEAIVESED 97 (297)
Q Consensus 81 ~-~~--~aD~Vi~~v~e~~~ 97 (297)
+ ++ ++|+|++|+|...+
T Consensus 65 ~~l~~~~~D~V~i~tp~~~h 84 (346)
T 3cea_A 65 DMIDTENIDAIFIVAPTPFH 84 (346)
T ss_dssp HHHTTSCCSEEEECSCGGGH
T ss_pred HHhcCCCCCEEEEeCChHhH
Confidence 6 44 69999999998765
No 220
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=97.98 E-value=4e-06 Score=74.70 Aligned_cols=73 Identities=21% Similarity=0.317 Sum_probs=50.1
Q ss_pred CCCCCcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEE-ecC-
Q 022407 1 MEEKMKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRC-TSN- 78 (297)
Q Consensus 1 M~~~~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~-~~~- 78 (297)
|+.+.|||.|+|+|.+|+.+|..|++ .++|++.|++.++++++. +. . ..+.. .+|
T Consensus 12 ~~g~~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~-----------~~--~---------~~~~~d~~d~ 68 (365)
T 3abi_A 12 IEGRHMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK-----------EF--A---------TPLKVDASNF 68 (365)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT-----------TT--S---------EEEECCTTCH
T ss_pred ccCCccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh-----------cc--C---------CcEEEecCCH
Confidence 55556899999999999999988865 589999999998877651 11 0 11111 122
Q ss_pred --ccc-ccCCcEEEEecccCH
Q 022407 79 --LKD-LHSADIIVEAIVESE 96 (297)
Q Consensus 79 --~~~-~~~aD~Vi~~v~e~~ 96 (297)
+.+ ++++|+||.|+|...
T Consensus 69 ~~l~~~~~~~DvVi~~~p~~~ 89 (365)
T 3abi_A 69 DKLVEVMKEFELVIGALPGFL 89 (365)
T ss_dssp HHHHHHHTTCSEEEECCCGGG
T ss_pred HHHHHHHhCCCEEEEecCCcc
Confidence 223 689999999998764
No 221
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.97 E-value=2.5e-05 Score=67.98 Aligned_cols=68 Identities=15% Similarity=0.229 Sum_probs=51.4
Q ss_pred CcEEEEECCChhHHHHHHHHHHC-CCcE-EEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMD-GLDV-WLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD- 81 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~-G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~- 81 (297)
..||+|||+|.||..++..|.+. ++++ .++|+++++++.+ .+ .+...+++++
T Consensus 10 ~~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~-----------~~--------------~~~~~~~~~~~ 64 (315)
T 3c1a_A 10 PVRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLALV-----------PP--------------GCVIESDWRSV 64 (315)
T ss_dssp CEEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTC-----------CT--------------TCEEESSTHHH
T ss_pred cceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHH-----------Hh--------------hCcccCCHHHH
Confidence 46899999999999999999885 6775 5999998765432 00 0345667766
Q ss_pred cc--CCcEEEEecccCHH
Q 022407 82 LH--SADIIVEAIVESED 97 (297)
Q Consensus 82 ~~--~aD~Vi~~v~e~~~ 97 (297)
++ ++|+|+.|+|...+
T Consensus 65 l~~~~~D~V~i~tp~~~h 82 (315)
T 3c1a_A 65 VSAPEVEAVIIATPPATH 82 (315)
T ss_dssp HTCTTCCEEEEESCGGGH
T ss_pred hhCCCCCEEEEeCChHHH
Confidence 53 79999999998765
No 222
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=97.96 E-value=2.3e-05 Score=69.52 Aligned_cols=75 Identities=17% Similarity=0.138 Sum_probs=53.1
Q ss_pred CCCCCcEEEEECCChhHHH-HHHHHHHC-CCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEec
Q 022407 1 MEEKMKVMGVVGSGQMGSG-IAQLGVMD-GLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTS 77 (297)
Q Consensus 1 M~~~~~~V~iiG~G~mG~~-iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 77 (297)
|.++..||+|||+|.||.. ++..+.+. +++|. ++|+++++++.+ .++ .......+
T Consensus 1 M~M~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~-----------a~~-----------~~~~~~~~ 58 (359)
T 3m2t_A 1 MSLSLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRV-----------HRF-----------ISDIPVLD 58 (359)
T ss_dssp --CCCEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGG-----------GGT-----------SCSCCEES
T ss_pred CCCCcceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHH-----------HHh-----------cCCCcccC
Confidence 5444579999999999985 78888765 77776 889999876554 111 11234667
Q ss_pred Cccc-cc--CCcEEEEecccCHH
Q 022407 78 NLKD-LH--SADIIVEAIVESED 97 (297)
Q Consensus 78 ~~~~-~~--~aD~Vi~~v~e~~~ 97 (297)
|+++ ++ +.|+|+.|+|...+
T Consensus 59 ~~~~ll~~~~vD~V~i~tp~~~H 81 (359)
T 3m2t_A 59 NVPAMLNQVPLDAVVMAGPPQLH 81 (359)
T ss_dssp SHHHHHHHSCCSEEEECSCHHHH
T ss_pred CHHHHhcCCCCCEEEEcCCcHHH
Confidence 8777 44 56999999997665
No 223
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=97.96 E-value=6e-05 Score=65.79 Aligned_cols=71 Identities=13% Similarity=0.160 Sum_probs=50.2
Q ss_pred cEEEEECCChhHH-HHHHHHHHC-CCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcccc-
Q 022407 6 KVMGVVGSGQMGS-GIAQLGVMD-GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDL- 82 (297)
Q Consensus 6 ~~V~iiG~G~mG~-~iA~~l~~~-G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~- 82 (297)
.||+|||+|.||. .++..|.+. +++|+++|+++++.+++.+ +.|.. ..+.++.+.+
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~----------~~g~~-----------~~~~~~~~~l~ 61 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLAT----------RYRVS-----------ATCTDYRDVLQ 61 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHH----------HTTCC-----------CCCSSTTGGGG
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHH----------HcCCC-----------ccccCHHHHhh
Confidence 5899999999998 488888764 7788899999988765421 11210 0123333445
Q ss_pred cCCcEEEEecccCHH
Q 022407 83 HSADIIVEAIVESED 97 (297)
Q Consensus 83 ~~aD~Vi~~v~e~~~ 97 (297)
.++|+|++|+|...+
T Consensus 62 ~~~D~V~i~tp~~~h 76 (323)
T 1xea_A 62 YGVDAVMIHAATDVH 76 (323)
T ss_dssp GCCSEEEECSCGGGH
T ss_pred cCCCEEEEECCchhH
Confidence 689999999997764
No 224
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=97.96 E-value=0.00014 Score=63.16 Aligned_cols=105 Identities=15% Similarity=0.271 Sum_probs=62.4
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCC--cEEEEeC--CHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecC--
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGL--DVWLVDT--DPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSN-- 78 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~--~V~~~d~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~-- 78 (297)
+||+|+|+ |.+|..++..|+..|+ ++.++|+ ++++++.....+.+.. ...+ ....+...++
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~---~~~~---------~~~~i~~~~d~l 68 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDAL---AGTR---------SDANIYVESDEN 68 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHH---TTSC---------CCCEEEEEETTC
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhH---HhcC---------CCeEEEeCCcch
Confidence 48999999 9999999999998885 6899999 7655443222222210 0000 0112333333
Q ss_pred cccccCCcEEEEec--ccC------------HHHHHHHHHHHHhhccCCeEEeecCCCcc
Q 022407 79 LKDLHSADIIVEAI--VES------------EDVKKKLFSELDKITKASAILASNTSSIS 124 (297)
Q Consensus 79 ~~~~~~aD~Vi~~v--~e~------------~~~k~~~~~~l~~~~~~~~ii~s~ts~~~ 124 (297)
.+++++||+||.+. |.. ....+.+.+.+.+++ +.+++..|+...
T Consensus 69 ~~al~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~--~~~vlv~SNPv~ 126 (313)
T 1hye_A 69 LRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC--DTKIFVITNPVD 126 (313)
T ss_dssp GGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC--CCEEEECSSSHH
T ss_pred HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEecCcHH
Confidence 45699999999876 211 122344555666776 555443444433
No 225
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=97.92 E-value=7e-05 Score=65.97 Aligned_cols=96 Identities=11% Similarity=0.202 Sum_probs=62.8
Q ss_pred cEEEEECCChhHHHHHHHHH-H-CCCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-
Q 022407 6 KVMGVVGSGQMGSGIAQLGV-M-DGLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD- 81 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~-~-~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~- 81 (297)
.||+|||+|.||..++..+. + .+++|. ++|+++++++.+.+ +.|. .....+++++
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~----------~~g~-----------~~~~~~~~~~l 61 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVE----------QYQL-----------NATVYPNDDSL 61 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHH----------HTTC-----------CCEEESSHHHH
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHH----------HhCC-----------CCeeeCCHHHH
Confidence 58999999999999999988 4 477766 88999988766521 1121 1246677777
Q ss_pred cc--CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHH
Q 022407 82 LH--SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISIT 126 (297)
Q Consensus 82 ~~--~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~ 126 (297)
++ ++|+|+.|+|...+.. .+...+.. ...+++.-..+.+.+
T Consensus 62 l~~~~~D~V~i~tp~~~h~~-~~~~al~~---Gk~vl~EKP~a~~~~ 104 (344)
T 3mz0_A 62 LADENVDAVLVTSWGPAHES-SVLKAIKA---QKYVFCEKPLATTAE 104 (344)
T ss_dssp HHCTTCCEEEECSCGGGHHH-HHHHHHHT---TCEEEECSCSCSSHH
T ss_pred hcCCCCCEEEECCCchhHHH-HHHHHHHC---CCcEEEcCCCCCCHH
Confidence 44 4999999999877632 22222222 234555444455543
No 226
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=97.91 E-value=2.5e-05 Score=68.40 Aligned_cols=100 Identities=16% Similarity=0.153 Sum_probs=61.1
Q ss_pred CCCCCcEEEEECCChhHHHHHHHHHHC-CCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecC
Q 022407 1 MEEKMKVMGVVGSGQMGSGIAQLGVMD-GLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSN 78 (297)
Q Consensus 1 M~~~~~~V~iiG~G~mG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 78 (297)
|..+..||+|||+|.||..++..+.+. +.+|+ ++|+++++++.+ .++.. .-...++
T Consensus 1 M~m~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~-----------a~~~~-----------~~~~~~~ 58 (329)
T 3evn_A 1 MSLSKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAF-----------ANKYH-----------LPKAYDK 58 (329)
T ss_dssp ----CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC--------------CCC-----------CSCEESC
T ss_pred CCCCceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHH-----------HHHcC-----------CCcccCC
Confidence 554557999999999999999988765 45555 889998765443 11111 0125677
Q ss_pred ccc-cc--CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHH
Q 022407 79 LKD-LH--SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISIT 126 (297)
Q Consensus 79 ~~~-~~--~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~ 126 (297)
+++ ++ ++|+|+.|+|...+.. .+...+.. ...+++.-..+.+.+
T Consensus 59 ~~~ll~~~~~D~V~i~tp~~~h~~-~~~~al~a---Gk~Vl~EKP~a~~~~ 105 (329)
T 3evn_A 59 LEDMLADESIDVIYVATINQDHYK-VAKAALLA---GKHVLVEKPFTLTYD 105 (329)
T ss_dssp HHHHHTCTTCCEEEECSCGGGHHH-HHHHHHHT---TCEEEEESSCCSSHH
T ss_pred HHHHhcCCCCCEEEECCCcHHHHH-HHHHHHHC---CCeEEEccCCcCCHH
Confidence 776 55 7999999999877532 22222222 234666555555553
No 227
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=97.90 E-value=3.7e-05 Score=67.18 Aligned_cols=71 Identities=15% Similarity=0.141 Sum_probs=53.3
Q ss_pred CcEEEEECCChhHHHHHHHHHH--CCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVM--DGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD- 81 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~--~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~- 81 (297)
.++|+|||+|.||..++..|+. ...+|.+|||++++.+++.+.+.. .+ + .+. .+++++
T Consensus 125 ~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~-------~~-~----------~~~-~~~~~e~ 185 (322)
T 1omo_A 125 SSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCED-------RG-I----------SAS-VQPAEEA 185 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHH-------TT-C----------CEE-ECCHHHH
T ss_pred CCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHh-------cC-c----------eEE-ECCHHHH
Confidence 4689999999999999999886 356899999999988876443221 11 1 123 556655
Q ss_pred ccCCcEEEEecccC
Q 022407 82 LHSADIIVEAIVES 95 (297)
Q Consensus 82 ~~~aD~Vi~~v~e~ 95 (297)
+ ++|+||.|+|..
T Consensus 186 v-~aDvVi~aTp~~ 198 (322)
T 1omo_A 186 S-RCDVLVTTTPSR 198 (322)
T ss_dssp T-SSSEEEECCCCS
T ss_pred h-CCCEEEEeeCCC
Confidence 7 999999999864
No 228
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=97.90 E-value=1.8e-05 Score=67.55 Aligned_cols=72 Identities=10% Similarity=0.202 Sum_probs=51.4
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcccc--
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDL-- 82 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~-- 82 (297)
.++|.|+|+|.||++++..|++.|.+|++++|+.++++.+.+.+. ..+ .+.. .+.+++
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~-------~~~------------~~~~-~~~~~~~~ 178 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQ-------PYG------------NIQA-VSMDSIPL 178 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHG-------GGS------------CEEE-EEGGGCCC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcc-------ccC------------CeEE-eeHHHhcc
Confidence 368999999999999999999999999999999988776533211 001 1112 123344
Q ss_pred cCCcEEEEecccCH
Q 022407 83 HSADIIVEAIVESE 96 (297)
Q Consensus 83 ~~aD~Vi~~v~e~~ 96 (297)
.++|+||.++|...
T Consensus 179 ~~~DivIn~t~~~~ 192 (272)
T 1p77_A 179 QTYDLVINATSAGL 192 (272)
T ss_dssp SCCSEEEECCCC--
T ss_pred CCCCEEEECCCCCC
Confidence 38999999998644
No 229
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=97.89 E-value=8.5e-05 Score=64.99 Aligned_cols=70 Identities=10% Similarity=0.161 Sum_probs=50.7
Q ss_pred cEEEEECCChhHHHH-HHHHHHCCCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-c
Q 022407 6 KVMGVVGSGQMGSGI-AQLGVMDGLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-L 82 (297)
Q Consensus 6 ~~V~iiG~G~mG~~i-A~~l~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~ 82 (297)
.||+|||+|.||..+ +..+.+.|++|. ++|+++++.+.+.+ +.|.. ...+++++ +
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~----------~~g~~------------~~~~~~~~~l 58 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYAT----------ENGIG------------KSVTSVEELV 58 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHH----------HTTCS------------CCBSCHHHHH
T ss_pred CeEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHH----------HcCCC------------cccCCHHHHh
Confidence 379999999999998 777777888865 88999987665421 11210 13456665 4
Q ss_pred c--CCcEEEEecccCHH
Q 022407 83 H--SADIIVEAIVESED 97 (297)
Q Consensus 83 ~--~aD~Vi~~v~e~~~ 97 (297)
+ ++|+|+.|+|...+
T Consensus 59 ~~~~~D~V~i~tp~~~h 75 (332)
T 2glx_A 59 GDPDVDAVYVSTTNELH 75 (332)
T ss_dssp TCTTCCEEEECSCGGGH
T ss_pred cCCCCCEEEEeCChhHh
Confidence 4 59999999997765
No 230
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=97.86 E-value=8.3e-05 Score=65.30 Aligned_cols=106 Identities=13% Similarity=0.207 Sum_probs=64.7
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCC-------cEEEEeCCHHH--HHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEE
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGL-------DVWLVDTDPDA--LVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRC 75 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~-------~V~~~d~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 75 (297)
-||+|+|+ |.+|.+++..|+.... ++.++|+++.. ++...-. ++...+ .....+..
T Consensus 25 vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~D--------L~~~~~------~~~~~~~~ 90 (345)
T 4h7p_A 25 VKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAE--------LEDCAF------PLLDKVVV 90 (345)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHH--------HHHTTC------TTEEEEEE
T ss_pred CEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhh--------hhhcCc------cCCCcEEE
Confidence 38999997 9999999999998654 79999997642 2211111 111111 11123445
Q ss_pred ecCcc-cccCCcEEEEec--ccC------------HHHHHHHHHHHHhhccCCeEEeecCCCccH
Q 022407 76 TSNLK-DLHSADIIVEAI--VES------------EDVKKKLFSELDKITKASAILASNTSSISI 125 (297)
Q Consensus 76 ~~~~~-~~~~aD~Vi~~v--~e~------------~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~ 125 (297)
.++.. ++++||+||.+. |-+ ..+.+.+...|.++++++++++..|..+.+
T Consensus 91 ~~~~~~a~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNPvd~ 155 (345)
T 4h7p_A 91 TADPRVAFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNPANT 155 (345)
T ss_dssp ESCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHH
T ss_pred cCChHHHhCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCCcch
Confidence 55554 489999999865 221 223444555577788788765544444443
No 231
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=97.85 E-value=5e-05 Score=58.24 Aligned_cols=81 Identities=11% Similarity=0.180 Sum_probs=55.1
Q ss_pred CcEEEEECC----ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcc
Q 022407 5 MKVMGVVGS----GQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLK 80 (297)
Q Consensus 5 ~~~V~iiG~----G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 80 (297)
.++|+|||+ |.+|..++.+|.+.||+ +|+++++. +. ...+.+..+++
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~--v~~Vnp~~-~~--------------------------i~G~~~y~sl~ 72 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYD--VYPVNPKY-EE--------------------------VLGRKCYPSVL 72 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCE--EEEECTTC-SE--------------------------ETTEECBSSGG
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCE--EEEECCCC-Ce--------------------------ECCeeccCCHH
Confidence 368999999 79999999999999997 56666542 00 01235666777
Q ss_pred cc-cCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEe
Q 022407 81 DL-HSADIIVEAIVESEDVKKKLFSELDKITKASAILA 117 (297)
Q Consensus 81 ~~-~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~ 117 (297)
++ ...|+++.++|.+ ...+++.++.+.-. ..++.
T Consensus 73 ~l~~~vDlvvi~vp~~--~~~~vv~~~~~~gi-~~i~~ 107 (144)
T 2d59_A 73 DIPDKIEVVDLFVKPK--LTMEYVEQAIKKGA-KVVWF 107 (144)
T ss_dssp GCSSCCSEEEECSCHH--HHHHHHHHHHHHTC-SEEEE
T ss_pred HcCCCCCEEEEEeCHH--HHHHHHHHHHHcCC-CEEEE
Confidence 74 4799999999863 34566666554322 34554
No 232
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=97.85 E-value=5.7e-06 Score=73.97 Aligned_cols=39 Identities=26% Similarity=0.319 Sum_probs=36.2
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
++|+|+|+|.+|..+|..+...|.+|+++|+++++++.+
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~ 207 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQL 207 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHH
Confidence 689999999999999999999999999999999887665
No 233
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=97.84 E-value=5.2e-05 Score=67.13 Aligned_cols=39 Identities=18% Similarity=0.279 Sum_probs=35.9
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
++|+|+|+|.||..+|..|...|.+|+++|++++++++.
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~ 212 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAA 212 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 689999999999999999999999999999998876654
No 234
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=97.84 E-value=3.9e-05 Score=65.59 Aligned_cols=71 Identities=11% Similarity=0.210 Sum_probs=51.8
Q ss_pred cEEEEECCChhHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-cc
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGL-DVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LH 83 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~ 83 (297)
+++.|+|+|.||++++..|++.|. +|++++|++++.+++.+.+. ..+ .+... ++++ ..
T Consensus 127 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~-------~~~------------~~~~~-~~~~l~~ 186 (281)
T 3o8q_A 127 ATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVA-------AYG------------EVKAQ-AFEQLKQ 186 (281)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHG-------GGS------------CEEEE-EGGGCCS
T ss_pred CEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhh-------ccC------------CeeEe-eHHHhcC
Confidence 689999999999999999999996 99999999988776533221 111 11222 2333 26
Q ss_pred CCcEEEEecccCH
Q 022407 84 SADIIVEAIVESE 96 (297)
Q Consensus 84 ~aD~Vi~~v~e~~ 96 (297)
++|+||.|+|...
T Consensus 187 ~aDiIInaTp~gm 199 (281)
T 3o8q_A 187 SYDVIINSTSASL 199 (281)
T ss_dssp CEEEEEECSCCCC
T ss_pred CCCEEEEcCcCCC
Confidence 8999999998654
No 235
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=97.83 E-value=1.6e-05 Score=70.85 Aligned_cols=39 Identities=21% Similarity=0.371 Sum_probs=36.1
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
++|+|+|+|.+|..++..+...|.+|+++|+++++++.+
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~ 205 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYL 205 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHH
Confidence 689999999999999999999999999999999877654
No 236
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=97.82 E-value=2.9e-05 Score=59.28 Aligned_cols=83 Identities=14% Similarity=0.129 Sum_probs=56.5
Q ss_pred CcEEEEECC----ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcc
Q 022407 5 MKVMGVVGS----GQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLK 80 (297)
Q Consensus 5 ~~~V~iiG~----G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 80 (297)
.++|+|||+ |.+|..++.+|.+.||+ +|++|+.+... ....+.+..+++
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~G~~--v~~vnp~~~~~-------------------------~i~G~~~~~sl~ 65 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYR--VLPVNPRFQGE-------------------------ELFGEEAVASLL 65 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTTCE--EEEECGGGTTS-------------------------EETTEECBSSGG
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHCCCE--EEEeCCCcccC-------------------------cCCCEEecCCHH
Confidence 368999999 89999999999999997 67777652100 012235667777
Q ss_pred cc-cCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEe
Q 022407 81 DL-HSADIIVEAIVESEDVKKKLFSELDKITKASAILA 117 (297)
Q Consensus 81 ~~-~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~ 117 (297)
++ ...|+++.++|.+ ...+++.++.+.-.+ .++.
T Consensus 66 el~~~vDlavi~vp~~--~~~~v~~~~~~~gi~-~i~~ 100 (140)
T 1iuk_A 66 DLKEPVDILDVFRPPS--ALMDHLPEVLALRPG-LVWL 100 (140)
T ss_dssp GCCSCCSEEEECSCHH--HHTTTHHHHHHHCCS-CEEE
T ss_pred HCCCCCCEEEEEeCHH--HHHHHHHHHHHcCCC-EEEE
Confidence 74 5699999999863 344556665543333 4444
No 237
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=97.82 E-value=4.6e-05 Score=64.87 Aligned_cols=39 Identities=10% Similarity=0.049 Sum_probs=36.2
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
++|.|+|+|.||++++..|++.|.+|++++|++++++.+
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~l 158 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEEL 158 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHH
Confidence 689999999999999999999999999999999887665
No 238
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=97.82 E-value=6.7e-05 Score=63.80 Aligned_cols=67 Identities=18% Similarity=0.146 Sum_probs=50.5
Q ss_pred cEEEEECCChhHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcccccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGL-DVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 84 (297)
++|.|||+|.||++++..|+..|. +|++++|+.++.+.+.+.+ +. .+..+.. +.+
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~----------~~-------------~~~~~~~-~~~ 175 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY----------GY-------------AYINSLE-NQQ 175 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH----------TC-------------EEESCCT-TCC
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc----------CC-------------ccchhhh-ccc
Confidence 589999999999999999999997 8999999998877653221 10 1222222 467
Q ss_pred CcEEEEecccCH
Q 022407 85 ADIIVEAIVESE 96 (297)
Q Consensus 85 aD~Vi~~v~e~~ 96 (297)
+|+||.|+|...
T Consensus 176 ~DivInaTp~gm 187 (271)
T 1npy_A 176 ADILVNVTSIGM 187 (271)
T ss_dssp CSEEEECSSTTC
T ss_pred CCEEEECCCCCc
Confidence 999999998544
No 239
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.79 E-value=6.3e-05 Score=64.38 Aligned_cols=43 Identities=23% Similarity=0.324 Sum_probs=38.3
Q ss_pred cEEEEECCChhHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGL-DVWLVDTDPDALVRATKSI 48 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~~ 48 (297)
+++.|+|+|-+|++++..|+..|. +|++++|+.++.+.+.+.+
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~ 171 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVI 171 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH
Confidence 689999999999999999999999 6999999999887765544
No 240
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=97.79 E-value=6.9e-06 Score=70.09 Aligned_cols=38 Identities=13% Similarity=0.082 Sum_probs=34.6
Q ss_pred cEEEEECCChhHHHHHHHHHHCCC-cEEEEeCCHHHHHH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGL-DVWLVDTDPDALVR 43 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~ 43 (297)
++|.|+|+|.||++++..|++.|. +|++++|++++.++
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~ 156 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNN 156 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTT
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHH
Confidence 589999999999999999999999 99999999876543
No 241
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=97.78 E-value=0.00028 Score=63.88 Aligned_cols=151 Identities=17% Similarity=0.213 Sum_probs=83.3
Q ss_pred CcEEEEECCChhHHHHHHHHHHC-CCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCC-------Chhhhcc--cCCce
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMD-GLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQL-------SQAMGTD--APRRL 73 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~-------~~~~~~~--~~~~i 73 (297)
..||||||+|.||..++..+... +.+|. ++|+++++++.+.+... |.- +..+... .....
T Consensus 23 ~IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~y---------G~~~~~~~~~~~~~i~~a~~~g~~ 93 (446)
T 3upl_A 23 PIRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAY---------GDEENAREATTESAMTRAIEAGKI 93 (446)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHH---------SSSTTEEECSSHHHHHHHHHTTCE
T ss_pred ceEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhc---------CCccccccccchhhhhhhhccCCc
Confidence 35899999999999999887653 56644 88999988776532210 100 0000000 01234
Q ss_pred EEecCccc-cc--CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHH---HHhhhcCCCCeEEEeecCCCC
Q 022407 74 RCTSNLKD-LH--SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISIT---RLASATSRPCQVIGMHFMNPP 147 (297)
Q Consensus 74 ~~~~~~~~-~~--~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~---~l~~~~~~~~~~~g~h~~~p~ 147 (297)
.+++|+++ ++ +.|+|++++|....-.+.....++. ...+++.+. .+... ++.+.......
T Consensus 94 ~v~~D~eeLL~d~dIDaVviaTp~p~~H~e~a~~AL~A---GKHVv~~nk-~l~~~eg~eL~~~A~e~Gv---------- 159 (446)
T 3upl_A 94 AVTDDNDLILSNPLIDVIIDATGIPEVGAETGIAAIRN---GKHLVMMNV-EADVTIGPYLKAQADKQGV---------- 159 (446)
T ss_dssp EEESCHHHHHTCTTCCEEEECSCCHHHHHHHHHHHHHT---TCEEEECCH-HHHHHHHHHHHHHHHHHTC----------
T ss_pred eEECCHHHHhcCCCCCEEEEcCCChHHHHHHHHHHHHc---CCcEEecCc-ccCHHHHHHHHHHHHHhCC----------
Confidence 57788876 44 5899999998643212223333332 233444332 22221 22222111011
Q ss_pred CCCcceeEecCCCChHHHHHHHHHHHHHhCCeEEEec
Q 022407 148 PLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQ 184 (297)
Q Consensus 148 ~~~~~vev~~~~~~~~~~~~~~~~l~~~lG~~~v~~~ 184 (297)
.+....+..+.....+.++.+.+|.+++.++
T Consensus 160 ------vl~~~~gdqp~~~~eLv~~a~~~G~~~v~~G 190 (446)
T 3upl_A 160 ------IYSLGAGDEPSSCMELIEFVSALGYEVVSAG 190 (446)
T ss_dssp ------CEEECTTSHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred ------eeeecCCcchHHHHHHHHHHHhCCCeEEEec
Confidence 1222233456777777888888999998875
No 242
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=97.78 E-value=0.00014 Score=64.32 Aligned_cols=97 Identities=12% Similarity=0.217 Sum_probs=63.5
Q ss_pred CcEEEEECCChhHHHHHHHHH-H-CCCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc
Q 022407 5 MKVMGVVGSGQMGSGIAQLGV-M-DGLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD 81 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~-~-~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 81 (297)
..||+|||+|.||..++..+. . .+++|. ++|+++++++.+.+. .|. .....+++++
T Consensus 23 ~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~----------~g~-----------~~~~~~~~~~ 81 (357)
T 3ec7_A 23 TLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDK----------YAI-----------EAKDYNDYHD 81 (357)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHH----------HTC-----------CCEEESSHHH
T ss_pred eeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHH----------hCC-----------CCeeeCCHHH
Confidence 358999999999999999988 4 477766 899999887665211 121 1246677776
Q ss_pred -cc--CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHH
Q 022407 82 -LH--SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISIT 126 (297)
Q Consensus 82 -~~--~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~ 126 (297)
++ +.|+|+.|+|...+.. .+...++. ...+++.-..+.+.+
T Consensus 82 ll~~~~~D~V~i~tp~~~h~~-~~~~al~a---Gk~Vl~EKPla~~~~ 125 (357)
T 3ec7_A 82 LINDKDVEVVIITASNEAHAD-VAVAALNA---NKYVFCEKPLAVTAA 125 (357)
T ss_dssp HHHCTTCCEEEECSCGGGHHH-HHHHHHHT---TCEEEEESSSCSSHH
T ss_pred HhcCCCCCEEEEcCCcHHHHH-HHHHHHHC---CCCEEeecCccCCHH
Confidence 44 5899999999877632 22222222 234565444455543
No 243
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=97.77 E-value=5.9e-05 Score=66.06 Aligned_cols=96 Identities=18% Similarity=0.110 Sum_probs=61.3
Q ss_pred CcEEEEEC-CChhHHHHHHHHHHCCC--c-----EEEEeCCHH--HHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceE
Q 022407 5 MKVMGVVG-SGQMGSGIAQLGVMDGL--D-----VWLVDTDPD--ALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLR 74 (297)
Q Consensus 5 ~~~V~iiG-~G~mG~~iA~~l~~~G~--~-----V~~~d~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~ 74 (297)
.+||+|+| +|.+|+.+|..|+..|. + +.++|+++. +++.....+ ..... .....+.
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL--------~~~~~------~~~~~~~ 68 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMEL--------QDCAL------PLLKDVI 68 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHH--------HHTCC------TTEEEEE
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhh--------Hhhhh------cccCCEE
Confidence 46899999 79999999999998887 6 999999752 333221111 11111 0112344
Q ss_pred EecC-cccccCCcEEEEec--cc------------CHHHHHHHHHHHHhhccCCe
Q 022407 75 CTSN-LKDLHSADIIVEAI--VE------------SEDVKKKLFSELDKITKASA 114 (297)
Q Consensus 75 ~~~~-~~~~~~aD~Vi~~v--~e------------~~~~k~~~~~~l~~~~~~~~ 114 (297)
..++ .+++++||+||.+. |. +..+.+.+...+.++.+++.
T Consensus 69 ~~~~~~~~~~daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~ 123 (333)
T 5mdh_A 69 ATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSV 123 (333)
T ss_dssp EESCHHHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTC
T ss_pred EcCCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCe
Confidence 5544 45699999999865 21 12344556667778877765
No 244
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=97.77 E-value=8.4e-05 Score=63.26 Aligned_cols=77 Identities=17% Similarity=0.371 Sum_probs=47.8
Q ss_pred CCCCCcEEEEECC-ChhHHHHHHHHH-HCCCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEec
Q 022407 1 MEEKMKVMGVVGS-GQMGSGIAQLGV-MDGLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTS 77 (297)
Q Consensus 1 M~~~~~~V~iiG~-G~mG~~iA~~l~-~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 77 (297)
|..+.+||+|+|+ |.||+.++..+. ..|++|. ++|++++.... .+.+.+. ......+...+
T Consensus 1 ~~~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g------------~d~~~~~----g~~~~~v~~~~ 64 (273)
T 1dih_A 1 MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLG------------SDAGELA----GAGKTGVTVQS 64 (273)
T ss_dssp -CCCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCS------------CCTTCSS----SSSCCSCCEES
T ss_pred CCCCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhh------------hhHHHHc----CCCcCCceecC
Confidence 5444579999999 999999999876 4688877 88887642100 0001000 00011234566
Q ss_pred Cccc-ccCCcEEEEecc
Q 022407 78 NLKD-LHSADIIVEAIV 93 (297)
Q Consensus 78 ~~~~-~~~aD~Vi~~v~ 93 (297)
++++ ++++|+||++.+
T Consensus 65 dl~~~l~~~DvVIDft~ 81 (273)
T 1dih_A 65 SLDAVKDDFDVFIDFTR 81 (273)
T ss_dssp CSTTTTTSCSEEEECSC
T ss_pred CHHHHhcCCCEEEEcCC
Confidence 7766 678999997664
No 245
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=97.74 E-value=6e-05 Score=63.34 Aligned_cols=33 Identities=27% Similarity=0.414 Sum_probs=31.3
Q ss_pred cEEEEECCChhHHHHHHHHHHCCC-cEEEEeCCH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGL-DVWLVDTDP 38 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~-~V~~~d~~~ 38 (297)
++|.|||+|.+|+.+|..|+.+|. +++++|++.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 589999999999999999999998 899999987
No 246
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=97.72 E-value=0.00024 Score=63.11 Aligned_cols=70 Identities=17% Similarity=0.247 Sum_probs=50.1
Q ss_pred CCcEEEEECCChhHHH-HHHHHHHC-CCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcc
Q 022407 4 KMKVMGVVGSGQMGSG-IAQLGVMD-GLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLK 80 (297)
Q Consensus 4 ~~~~V~iiG~G~mG~~-iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 80 (297)
+..||+|||+|.||.. .+..+.+. +++|+ ++|++++++++ +.+ .....+|++
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~-------------~~~------------~~~~~~~~~ 60 (364)
T 3e82_A 6 NTINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVKR-------------DLP------------DVTVIASPE 60 (364)
T ss_dssp -CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHH-------------HCT------------TSEEESCHH
T ss_pred CcceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHh-------------hCC------------CCcEECCHH
Confidence 3468999999999997 56666654 77775 88999875431 111 125677887
Q ss_pred c-cc--CCcEEEEecccCHHH
Q 022407 81 D-LH--SADIIVEAIVESEDV 98 (297)
Q Consensus 81 ~-~~--~aD~Vi~~v~e~~~~ 98 (297)
+ ++ +.|+|++|+|...+.
T Consensus 61 ~ll~~~~~D~V~i~tp~~~H~ 81 (364)
T 3e82_A 61 AAVQHPDVDLVVIASPNATHA 81 (364)
T ss_dssp HHHTCTTCSEEEECSCGGGHH
T ss_pred HHhcCCCCCEEEEeCChHHHH
Confidence 7 54 789999999987764
No 247
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=97.71 E-value=0.00018 Score=63.03 Aligned_cols=95 Identities=9% Similarity=0.104 Sum_probs=62.0
Q ss_pred cEEEEECCChhHHHHHHHHHHCC---Cc-EEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDG---LD-VWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD 81 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G---~~-V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 81 (297)
.||+|||+|.||..++..+.+.+ ++ |.++|+++++++...+. .|. -...+|+++
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~----------~~~------------~~~~~~~~~ 60 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQK----------HDI------------PKAYGSYEE 60 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHH----------HTC------------SCEESSHHH
T ss_pred cEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHH----------cCC------------CcccCCHHH
Confidence 58999999999999998887654 34 55889999887665221 121 025677776
Q ss_pred -cc--CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHH
Q 022407 82 -LH--SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISIT 126 (297)
Q Consensus 82 -~~--~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~ 126 (297)
++ +.|+|+.|+|...+.. .+...++. ...+++.-..+.+.+
T Consensus 61 ll~~~~vD~V~i~tp~~~H~~-~~~~al~~---GkhVl~EKP~a~~~~ 104 (334)
T 3ohs_X 61 LAKDPNVEVAYVGTQHPQHKA-AVMLCLAA---GKAVLCEKPMGVNAA 104 (334)
T ss_dssp HHHCTTCCEEEECCCGGGHHH-HHHHHHHT---TCEEEEESSSSSSHH
T ss_pred HhcCCCCCEEEECCCcHHHHH-HHHHHHhc---CCEEEEECCCCCCHH
Confidence 44 6999999999887632 22222322 234666555555553
No 248
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=97.71 E-value=3.2e-05 Score=69.79 Aligned_cols=71 Identities=27% Similarity=0.356 Sum_probs=50.9
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-c
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGL-DVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-L 82 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~ 82 (297)
-++|+|||+|.||..++..+...|. +|+++|+++++++...+ +.|. .....+++.+ +
T Consensus 167 g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~----------~~g~-----------~~~~~~~l~~~l 225 (404)
T 1gpj_A 167 DKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELAR----------DLGG-----------EAVRFDELVDHL 225 (404)
T ss_dssp TCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH----------HHTC-----------EECCGGGHHHHH
T ss_pred CCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH----------HcCC-----------ceecHHhHHHHh
Confidence 3689999999999999999999998 89999999987644311 1121 0000123333 6
Q ss_pred cCCcEEEEecccCH
Q 022407 83 HSADIIVEAIVESE 96 (297)
Q Consensus 83 ~~aD~Vi~~v~e~~ 96 (297)
.++|+||.|++...
T Consensus 226 ~~aDvVi~at~~~~ 239 (404)
T 1gpj_A 226 ARSDVVVSATAAPH 239 (404)
T ss_dssp HTCSEEEECCSSSS
T ss_pred cCCCEEEEccCCCC
Confidence 78999999987654
No 249
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=97.70 E-value=0.00024 Score=62.87 Aligned_cols=73 Identities=12% Similarity=0.178 Sum_probs=51.1
Q ss_pred CCCCCcEEEEECCChhHHH-HHHHHHHC-CCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEec
Q 022407 1 MEEKMKVMGVVGSGQMGSG-IAQLGVMD-GLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTS 77 (297)
Q Consensus 1 M~~~~~~V~iiG~G~mG~~-iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 77 (297)
|.++..||+|||+|.||.. .+..+.+. +++|+ ++|+++++..+ +.+ .....+
T Consensus 1 M~m~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~-------------~~~------------~~~~~~ 55 (358)
T 3gdo_A 1 MSLDTIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTEEVKR-------------DFP------------DAEVVH 55 (358)
T ss_dssp -CTTCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCHHHHHH-------------HCT------------TSEEES
T ss_pred CCCCcceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHh-------------hCC------------CCceEC
Confidence 5434569999999999997 56666554 77765 88999865221 111 135677
Q ss_pred Cccc-cc--CCcEEEEecccCHHH
Q 022407 78 NLKD-LH--SADIIVEAIVESEDV 98 (297)
Q Consensus 78 ~~~~-~~--~aD~Vi~~v~e~~~~ 98 (297)
|+++ ++ +.|+|++|+|...+.
T Consensus 56 ~~~~ll~~~~vD~V~i~tp~~~H~ 79 (358)
T 3gdo_A 56 ELEEITNDPAIELVIVTTPSGLHY 79 (358)
T ss_dssp STHHHHTCTTCCEEEECSCTTTHH
T ss_pred CHHHHhcCCCCCEEEEcCCcHHHH
Confidence 8877 54 789999999988763
No 250
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=97.69 E-value=8.3e-05 Score=64.87 Aligned_cols=92 Identities=11% Similarity=0.226 Sum_probs=59.8
Q ss_pred cEEEEECCChhHHHHHHHHHHC-CCcE-EEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-c
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMD-GLDV-WLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-L 82 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~-G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~ 82 (297)
.||+|||+|.||..++..+.+. +.++ .++|+++++ .+ . ..+...+++++ +
T Consensus 4 irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~--~~------------~-------------~gv~~~~d~~~ll 56 (320)
T 1f06_A 4 IRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL--DT------------K-------------TPVFDVADVDKHA 56 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC--SS------------S-------------SCEEEGGGGGGTT
T ss_pred CEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHH--hh------------c-------------CCCceeCCHHHHh
Confidence 5899999999999999998876 5664 588988553 11 0 01345566666 4
Q ss_pred cCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHHHH
Q 022407 83 HSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRL 128 (297)
Q Consensus 83 ~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~~l 128 (297)
.++|+||+|+|...+. ..+...++. ...++++.+.+++..++
T Consensus 57 ~~~DvViiatp~~~h~-~~~~~al~a---G~~Vv~ekp~~~~~~~~ 98 (320)
T 1f06_A 57 DDVDVLFLCMGSATDI-PEQAPKFAQ---FACTVDTYDNHRDIPRH 98 (320)
T ss_dssp TTCSEEEECSCTTTHH-HHHHHHHTT---TSEEECCCCCGGGHHHH
T ss_pred cCCCEEEEcCCcHHHH-HHHHHHHHC---CCEEEECCCCcCCHHHH
Confidence 7899999999877642 222222322 33466655555555444
No 251
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=97.69 E-value=0.00015 Score=66.20 Aligned_cols=86 Identities=28% Similarity=0.325 Sum_probs=60.4
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|+|+|+|.+|.++|..|+..|.+|+++|+++.+...+ ...|. .+ .+.++ ++.
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~A-----------a~~g~-------------dv-~~lee~~~~ 320 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQA-----------TMEGL-------------QV-LTLEDVVSE 320 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-----------HHTTC-------------EE-CCGGGTTTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-----------HHhCC-------------cc-CCHHHHHHh
Confidence 689999999999999999999999999999998876554 22231 22 34444 778
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecC
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNT 120 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~t 120 (297)
+|+|+++......+..+ .-+.++++.+|+...
T Consensus 321 aDvVi~atG~~~vl~~e----~l~~mk~gaiVvNaG 352 (488)
T 3ond_A 321 ADIFVTTTGNKDIIMLD----HMKKMKNNAIVCNIG 352 (488)
T ss_dssp CSEEEECSSCSCSBCHH----HHTTSCTTEEEEESS
T ss_pred cCEEEeCCCChhhhhHH----HHHhcCCCeEEEEcC
Confidence 99999876432222222 234567788776433
No 252
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.68 E-value=0.00012 Score=62.19 Aligned_cols=40 Identities=13% Similarity=0.151 Sum_probs=36.5
Q ss_pred cEEEEECCChhHHHHHHHHHHCCC-cEEEEeCCHHHHHHHH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGL-DVWLVDTDPDALVRAT 45 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~ 45 (297)
+++.|+|+|.+|++++..|++.|. +|++++|++++.+++.
T Consensus 121 k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la 161 (272)
T 3pwz_A 121 RRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALR 161 (272)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHH
T ss_pred CEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence 689999999999999999999996 9999999998877663
No 253
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=97.67 E-value=0.00028 Score=62.52 Aligned_cols=95 Identities=16% Similarity=0.181 Sum_probs=61.9
Q ss_pred cEEEEECCChhHH-HHHHHHHHCCCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-c
Q 022407 6 KVMGVVGSGQMGS-GIAQLGVMDGLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-L 82 (297)
Q Consensus 6 ~~V~iiG~G~mG~-~iA~~l~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~ 82 (297)
.||+|||+|.+|. .++..+...|++|+ ++|+++++++.+.+ +.|. ....+|+++ +
T Consensus 27 irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~----------~~~~------------~~~~~~~~~ll 84 (361)
T 3u3x_A 27 LRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSA----------VYAD------------ARRIATAEEIL 84 (361)
T ss_dssp CEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHH----------HSSS------------CCEESCHHHHH
T ss_pred cEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHH----------HcCC------------CcccCCHHHHh
Confidence 5899999999995 56777777889855 88999988766521 1121 246678777 4
Q ss_pred c--CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHH
Q 022407 83 H--SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISIT 126 (297)
Q Consensus 83 ~--~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~ 126 (297)
+ +.|+|+.|+|...+. ..+...++. ...+++--..+...+
T Consensus 85 ~~~~vD~V~I~tp~~~H~-~~~~~al~a---GkhVl~EKPla~~~~ 126 (361)
T 3u3x_A 85 EDENIGLIVSAAVSSERA-ELAIRAMQH---GKDVLVDKPGMTSFD 126 (361)
T ss_dssp TCTTCCEEEECCCHHHHH-HHHHHHHHT---TCEEEEESCSCSSHH
T ss_pred cCCCCCEEEEeCChHHHH-HHHHHHHHC---CCeEEEeCCCCCCHH
Confidence 4 489999999977653 222222322 334666555555553
No 254
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=97.67 E-value=0.00011 Score=67.25 Aligned_cols=40 Identities=30% Similarity=0.391 Sum_probs=37.4
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
.|||-|+|+|.+|..+|..|...||+|+++|.++++++.+
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~ 42 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLREL 42 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHH
Confidence 4799999999999999999999999999999999988776
No 255
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=97.67 E-value=3.3e-05 Score=69.55 Aligned_cols=39 Identities=23% Similarity=0.223 Sum_probs=35.8
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
.+|+|+|+|.+|..++..+...|.+|+++|+++++++.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~ 211 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQV 211 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 689999999999999999999999999999999876654
No 256
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.66 E-value=0.00017 Score=62.35 Aligned_cols=68 Identities=21% Similarity=0.248 Sum_probs=45.1
Q ss_pred CcEEEEECCChhHHHHHHHHHH-CCCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcccc
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVM-DGLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDL 82 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~-~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 82 (297)
..||+|||+|.||..++..+.+ .++++. ++|+++++++. .|. . ....+++.+.
T Consensus 9 ~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~~~~--------------~g~----------~-~~~~~~l~~~ 63 (304)
T 3bio_A 9 KIRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAEVPF--------------ELQ----------P-FRVVSDIEQL 63 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC---------------------CCT----------T-SCEESSGGGS
T ss_pred CCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHH--------------cCC----------C-cCCHHHHHhC
Confidence 3699999999999999999887 467877 79999875321 121 0 1223444444
Q ss_pred cCCcEEEEecccCHH
Q 022407 83 HSADIIVEAIVESED 97 (297)
Q Consensus 83 ~~aD~Vi~~v~e~~~ 97 (297)
.++|+||+|+|...+
T Consensus 64 ~~~DvViiatp~~~h 78 (304)
T 3bio_A 64 ESVDVALVCSPSREV 78 (304)
T ss_dssp SSCCEEEECSCHHHH
T ss_pred CCCCEEEECCCchhh
Confidence 789999999997665
No 257
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=97.66 E-value=0.00024 Score=60.45 Aligned_cols=40 Identities=13% Similarity=0.156 Sum_probs=35.9
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
+++|.|.|+|.+|+.++..|++.|++|++.+|++++.+..
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~ 44 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAI 44 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHH
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhH
Confidence 4689999999999999999999999999999998765543
No 258
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=97.65 E-value=0.00026 Score=58.64 Aligned_cols=90 Identities=9% Similarity=-0.020 Sum_probs=59.1
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEec---C---
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTS---N--- 78 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~---~--- 78 (297)
.++|.|+|+|.+|..+|..|.+.|+ |+++|+++++++.+ . .|.. .... +
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~-----------~-~~~~------------~i~gd~~~~~~ 63 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVL-----------R-SGAN------------FVHGDPTRVSD 63 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHH-----------H-TTCE------------EEESCTTCHHH
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHH-----------h-cCCe------------EEEcCCCCHHH
Confidence 3689999999999999999999999 99999999877654 2 2210 1111 1
Q ss_pred cc-c-ccCCcEEEEecccCHHHHHHHHHHHHhhccCC-eEEeecCC
Q 022407 79 LK-D-LHSADIIVEAIVESEDVKKKLFSELDKITKAS-AILASNTS 121 (297)
Q Consensus 79 ~~-~-~~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~-~ii~s~ts 121 (297)
+. . +.+||.||.+++++... .......+...++ .+++...+
T Consensus 64 l~~a~i~~ad~vi~~~~~d~~n--~~~~~~a~~~~~~~~iia~~~~ 107 (234)
T 2aef_A 64 LEKANVRGARAVIVDLESDSET--IHCILGIRKIDESVRIIAEAER 107 (234)
T ss_dssp HHHTTCTTCSEEEECCSCHHHH--HHHHHHHHHHCSSSEEEEECSS
T ss_pred HHhcCcchhcEEEEcCCCcHHH--HHHHHHHHHHCCCCeEEEEECC
Confidence 11 2 67899999999876432 2222333333444 56664443
No 259
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=97.63 E-value=0.00018 Score=62.99 Aligned_cols=96 Identities=13% Similarity=0.204 Sum_probs=61.7
Q ss_pred CcEEEEECCChhHH-HHHHHHHHCCCcE-EEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-
Q 022407 5 MKVMGVVGSGQMGS-GIAQLGVMDGLDV-WLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD- 81 (297)
Q Consensus 5 ~~~V~iiG~G~mG~-~iA~~l~~~G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~- 81 (297)
..||+|||+|.+|. .++..+...|++| .++|+++++.+.+.+ +.+. ....+|+++
T Consensus 4 ~~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~~~~~~~~a~----------~~~~------------~~~~~~~~~l 61 (336)
T 2p2s_A 4 KIRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESDSDNRAKFTS----------LFPS------------VPFAASAEQL 61 (336)
T ss_dssp CCEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSCTTSCHHHHH----------HSTT------------CCBCSCHHHH
T ss_pred ccEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCCHHHHHHHHH----------hcCC------------CcccCCHHHH
Confidence 36899999999996 6777777788985 599999987665421 1111 235567776
Q ss_pred cc--CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHH
Q 022407 82 LH--SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISIT 126 (297)
Q Consensus 82 ~~--~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~ 126 (297)
++ +.|+|++|+|...+. ..+...+.. ...+++.-..+.+.+
T Consensus 62 l~~~~~D~V~i~tp~~~h~-~~~~~al~a---GkhVl~EKP~a~~~~ 104 (336)
T 2p2s_A 62 ITDASIDLIACAVIPCDRA-ELALRTLDA---GKDFFTAKPPLTTLE 104 (336)
T ss_dssp HTCTTCCEEEECSCGGGHH-HHHHHHHHT---TCEEEECSSCCSCHH
T ss_pred hhCCCCCEEEEeCChhhHH-HHHHHHHHC---CCcEEEeCCCCCCHH
Confidence 44 689999999987763 222222322 223565444445443
No 260
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=97.62 E-value=8.8e-05 Score=60.71 Aligned_cols=38 Identities=29% Similarity=0.420 Sum_probs=34.5
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVR 43 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~ 43 (297)
|||.|.|+ |.+|+.++..|++.|++|++++|++++++.
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~ 39 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAAD 39 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccc
Confidence 47999998 999999999999999999999999887654
No 261
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.60 E-value=0.00046 Score=56.73 Aligned_cols=129 Identities=21% Similarity=0.172 Sum_probs=75.1
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHH-HHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcccccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDA-LVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 84 (297)
++|.|||+|.+|..-+..|.++|.+|++++.+... ++. +.+.+.+.- +.-.-..+++.+
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~-----------l~~~~~i~~---------i~~~~~~~dL~~ 91 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINE-----------WEAKGQLRV---------KRKKVGEEDLLN 91 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHH-----------HHHTTSCEE---------ECSCCCGGGSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHH-----------HHHcCCcEE---------EECCCCHhHhCC
Confidence 68999999999999999999999999999876432 222 233443210 001112345889
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHHHHhhhcCCCCeEEEeecCCCCC--CCcceeEecCCCCh
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPPP--LMKLVEVIRGADTS 162 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~~l~~~~~~~~~~~g~h~~~p~~--~~~~vev~~~~~~~ 162 (297)
+|+||.+.. +.++...+ ...++.+..+ |...- |+. ..|+.|.- ..++.--+.+.+.+
T Consensus 92 adLVIaAT~-d~~~N~~I----~~~ak~gi~V--NvvD~-----------p~~---~~f~~Paiv~rg~l~iaIST~G~s 150 (223)
T 3dfz_A 92 VFFIVVATN-DQAVNKFV----KQHIKNDQLV--NMASS-----------FSD---GNIQIPAQFSRGRLSLAISTDGAS 150 (223)
T ss_dssp CSEEEECCC-CTHHHHHH----HHHSCTTCEE--EC----------------C---CSEECCEEEEETTEEEEEECTTSC
T ss_pred CCEEEECCC-CHHHHHHH----HHHHhCCCEE--EEeCC-----------ccc---CeEEEeeEEEeCCEEEEEECCCCC
Confidence 999998764 44444333 3334433333 22211 111 12334431 23344445566678
Q ss_pred HHHHHHHHHHHHH
Q 022407 163 DETFRATKALAER 175 (297)
Q Consensus 163 ~~~~~~~~~l~~~ 175 (297)
|....+++.-++.
T Consensus 151 P~la~~iR~~ie~ 163 (223)
T 3dfz_A 151 PLLTKRIKEDLSS 163 (223)
T ss_dssp HHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHH
Confidence 8888888877765
No 262
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=97.60 E-value=0.00046 Score=61.11 Aligned_cols=74 Identities=8% Similarity=0.128 Sum_probs=52.7
Q ss_pred CcEEEEECCChhHHHHHHHHHHC-CCcE-EEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMD-GLDV-WLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD- 81 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~-G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~- 81 (297)
..||+|||+|.||..++..+... ++++ .++|+++++.+.+.+ +.|. . ......+++++
T Consensus 6 ~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~----------~~~~-~--------~~~~~~~~~~~l 66 (362)
T 1ydw_A 6 QIRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFAT----------ANNY-P--------ESTKIHGSYESL 66 (362)
T ss_dssp CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHH----------HTTC-C--------TTCEEESSHHHH
T ss_pred ceEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHH----------HhCC-C--------CCCeeeCCHHHH
Confidence 36899999999999999988875 6665 589999987655411 1121 0 01245667776
Q ss_pred cc--CCcEEEEecccCHH
Q 022407 82 LH--SADIIVEAIVESED 97 (297)
Q Consensus 82 ~~--~aD~Vi~~v~e~~~ 97 (297)
++ ++|+|++|+|...+
T Consensus 67 l~~~~~D~V~i~tp~~~h 84 (362)
T 1ydw_A 67 LEDPEIDALYVPLPTSLH 84 (362)
T ss_dssp HHCTTCCEEEECCCGGGH
T ss_pred hcCCCCCEEEEcCChHHH
Confidence 43 69999999998775
No 263
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=97.59 E-value=0.00014 Score=62.04 Aligned_cols=40 Identities=20% Similarity=0.292 Sum_probs=36.3
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCC-cEEEEeCCHHHHHHH
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGL-DVWLVDTDPDALVRA 44 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~ 44 (297)
-+++.|+|+|.+|++++..|.+.|. +|++++|+.++++++
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~L 162 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEI 162 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence 3689999999999999999999998 899999999887654
No 264
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=97.57 E-value=0.00032 Score=61.92 Aligned_cols=92 Identities=16% Similarity=0.218 Sum_probs=58.8
Q ss_pred cEEEEECCChhHHH-HHHHHHHC-CCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-
Q 022407 6 KVMGVVGSGQMGSG-IAQLGVMD-GLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD- 81 (297)
Q Consensus 6 ~~V~iiG~G~mG~~-iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~- 81 (297)
.||+|||+|.||.. .+..+.+. +++|. ++|+++++.++ .. ......+|+++
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~~-------------~~------------~~~~~~~~~~~l 62 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVHA-------------DW------------PAIPVVSDPQML 62 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHT-------------TC------------SSCCEESCHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHHh-------------hC------------CCCceECCHHHH
Confidence 58999999999997 66667665 67765 88999876431 01 11246678777
Q ss_pred cc--CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHH
Q 022407 82 LH--SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISIT 126 (297)
Q Consensus 82 ~~--~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~ 126 (297)
++ +.|+|++|+|...+.. .+...++. ...+++--.-+.+..
T Consensus 63 l~~~~vD~V~i~tp~~~H~~-~~~~al~a---GkhV~~EKPla~~~~ 105 (352)
T 3kux_A 63 FNDPSIDLIVIPTPNDTHFP-LAQSALAA---GKHVVVDKPFTVTLS 105 (352)
T ss_dssp HHCSSCCEEEECSCTTTHHH-HHHHHHHT---TCEEEECSSCCSCHH
T ss_pred hcCCCCCEEEEeCChHHHHH-HHHHHHHC---CCcEEEECCCcCCHH
Confidence 44 5899999999887632 22222322 234555444455543
No 265
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=97.57 E-value=0.00017 Score=63.92 Aligned_cols=97 Identities=11% Similarity=0.158 Sum_probs=60.4
Q ss_pred CCCCCcEEEEECCChhHHH-HHHHHHHC-CCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEec
Q 022407 1 MEEKMKVMGVVGSGQMGSG-IAQLGVMD-GLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTS 77 (297)
Q Consensus 1 M~~~~~~V~iiG~G~mG~~-iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 77 (297)
|.++..||+|||+|.||.. .+..+.+. +++|+ ++|++++++.+ ........+
T Consensus 1 M~~~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~-------------------------~~~~~~~~~ 55 (362)
T 3fhl_A 1 MSLEIIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKELSKE-------------------------RYPQASIVR 55 (362)
T ss_dssp --CCCEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCGGGT-------------------------TCTTSEEES
T ss_pred CCCCceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHH-------------------------hCCCCceEC
Confidence 6555579999999999997 66666665 77775 88998764210 011235677
Q ss_pred Cccc-cc--CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHH
Q 022407 78 NLKD-LH--SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISIT 126 (297)
Q Consensus 78 ~~~~-~~--~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~ 126 (297)
|+++ ++ +.|+|++|+|...+.. .+...++. ...+++--.-+.+.+
T Consensus 56 ~~~~ll~~~~vD~V~i~tp~~~H~~-~~~~al~a---GkhVl~EKP~a~~~~ 103 (362)
T 3fhl_A 56 SFKELTEDPEIDLIVVNTPDNTHYE-YAGMALEA---GKNVVVEKPFTSTTK 103 (362)
T ss_dssp CSHHHHTCTTCCEEEECSCGGGHHH-HHHHHHHT---TCEEEEESSCCSSHH
T ss_pred CHHHHhcCCCCCEEEEeCChHHHHH-HHHHHHHC---CCeEEEecCCCCCHH
Confidence 8877 54 4899999999877632 22222322 234665444455543
No 266
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=97.56 E-value=0.00024 Score=62.53 Aligned_cols=73 Identities=11% Similarity=0.140 Sum_probs=52.4
Q ss_pred CCcEEEEECCChhHHH-HHHHHHHC-CCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcc
Q 022407 4 KMKVMGVVGSGQMGSG-IAQLGVMD-GLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLK 80 (297)
Q Consensus 4 ~~~~V~iiG~G~mG~~-iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 80 (297)
.+.||||||+|.||.. ++..+... +.+|+ ++|+++++++++.++ .|. -.+.+|++
T Consensus 22 ~mirigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~----------~g~------------~~~y~d~~ 79 (350)
T 4had_A 22 SMLRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADR----------FSV------------PHAFGSYE 79 (350)
T ss_dssp CCEEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHH----------HTC------------SEEESSHH
T ss_pred CccEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHH----------cCC------------CeeeCCHH
Confidence 4569999999999975 45566654 66766 889999987765221 121 13567887
Q ss_pred c-c--cCCcEEEEecccCHHH
Q 022407 81 D-L--HSADIIVEAIVESEDV 98 (297)
Q Consensus 81 ~-~--~~aD~Vi~~v~e~~~~ 98 (297)
+ + .+.|+|+.|+|...+.
T Consensus 80 ell~~~~iDaV~I~tP~~~H~ 100 (350)
T 4had_A 80 EMLASDVIDAVYIPLPTSQHI 100 (350)
T ss_dssp HHHHCSSCSEEEECSCGGGHH
T ss_pred HHhcCCCCCEEEEeCCCchhH
Confidence 7 4 4689999999988763
No 267
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=97.55 E-value=0.00029 Score=60.43 Aligned_cols=75 Identities=17% Similarity=0.218 Sum_probs=51.2
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcccccCC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHSA 85 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~a 85 (297)
+++.|+|+|.+|.++|..|++.| +|++++|+.++++.+.+.+.... +.... -.+...+-.+.+.++
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~------~~~~~-------~~~d~~~~~~~~~~~ 194 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKL------NKKFG-------EEVKFSGLDVDLDGV 194 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHH------TCCHH-------HHEEEECTTCCCTTC
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhc------ccccc-------eeEEEeeHHHhhCCC
Confidence 68999999999999999999999 99999999988776644432110 00000 001122212347789
Q ss_pred cEEEEeccc
Q 022407 86 DIIVEAIVE 94 (297)
Q Consensus 86 D~Vi~~v~e 94 (297)
|+||.+.+.
T Consensus 195 DilVn~ag~ 203 (287)
T 1nvt_A 195 DIIINATPI 203 (287)
T ss_dssp CEEEECSCT
T ss_pred CEEEECCCC
Confidence 999998864
No 268
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=97.53 E-value=0.00019 Score=63.59 Aligned_cols=110 Identities=7% Similarity=0.026 Sum_probs=62.4
Q ss_pred cEEEEEC-CChhHHHHHHHHHHCCC--c---EEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEec-C
Q 022407 6 KVMGVVG-SGQMGSGIAQLGVMDGL--D---VWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTS-N 78 (297)
Q Consensus 6 ~~V~iiG-~G~mG~~iA~~l~~~G~--~---V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~-~ 78 (297)
.||+|+| +|.+|.++|..++..+. + +.++|.+.+..+...+...-. ++.+.. .....++..+ +
T Consensus 33 ~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amD----L~h~~~------p~~~~v~i~~~~ 102 (375)
T 7mdh_A 33 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAME----LEDSLY------PLLREVSIGIDP 102 (375)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHH----HHTTTC------TTEEEEEEESCH
T ss_pred CEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHh----HHhhhh------hhcCCcEEecCC
Confidence 6899999 79999999999998876 3 777665443322211111101 222221 0112334443 4
Q ss_pred cccccCCcEEEEec--ccC------------HHHHHHHHHHHHhhccCCeEEeecCCCccH
Q 022407 79 LKDLHSADIIVEAI--VES------------EDVKKKLFSELDKITKASAILASNTSSISI 125 (297)
Q Consensus 79 ~~~~~~aD~Vi~~v--~e~------------~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~ 125 (297)
++++++||+||.+. |-. ..+.+.+...+.++..++++++..|..+.+
T Consensus 103 y~~~~daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPvD~ 163 (375)
T 7mdh_A 103 YEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPCNT 163 (375)
T ss_dssp HHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHH
T ss_pred HHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCchhH
Confidence 66799999999864 211 122333444466665566766655554444
No 269
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=97.53 E-value=0.00049 Score=62.52 Aligned_cols=75 Identities=16% Similarity=0.080 Sum_probs=52.1
Q ss_pred cEEEEECCChhHH-HHHHHHHHC-CCcE-EEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-
Q 022407 6 KVMGVVGSGQMGS-GIAQLGVMD-GLDV-WLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD- 81 (297)
Q Consensus 6 ~~V~iiG~G~mG~-~iA~~l~~~-G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~- 81 (297)
.||+|||+|.||. .++..+.+. +++| .++|+++++.+.+.+ +.|. .. ..+...+++++
T Consensus 84 irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~----------~~g~-~~-------~~~~~~~~~~~l 145 (433)
T 1h6d_A 84 FGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAA----------EYGV-DP-------RKIYDYSNFDKI 145 (433)
T ss_dssp EEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHH----------HTTC-CG-------GGEECSSSGGGG
T ss_pred eEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHH----------HhCC-Cc-------ccccccCCHHHH
Confidence 5899999999997 888888765 5675 589999987665411 1121 00 01234567776
Q ss_pred cc--CCcEEEEecccCHHH
Q 022407 82 LH--SADIIVEAIVESEDV 98 (297)
Q Consensus 82 ~~--~aD~Vi~~v~e~~~~ 98 (297)
++ ++|+|++|+|...+.
T Consensus 146 l~~~~vD~V~iatp~~~h~ 164 (433)
T 1h6d_A 146 AKDPKIDAVYIILPNSLHA 164 (433)
T ss_dssp GGCTTCCEEEECSCGGGHH
T ss_pred hcCCCCCEEEEcCCchhHH
Confidence 44 799999999987753
No 270
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=97.51 E-value=0.00032 Score=63.30 Aligned_cols=95 Identities=14% Similarity=0.213 Sum_probs=61.8
Q ss_pred cEEEEECCChhHHHHHHHHHHC---------CCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEE
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMD---------GLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRC 75 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~---------G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 75 (297)
.||||||+|.||...+..+.+. +.+|+ ++|+++++++++.+. .|. ..+
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~----------~~~------------~~~ 84 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAK----------LGA------------EKA 84 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHH----------HTC------------SEE
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHH----------cCC------------CeE
Confidence 5899999999999888887764 34544 889999987765221 121 146
Q ss_pred ecCccc-c--cCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHH
Q 022407 76 TSNLKD-L--HSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISIT 126 (297)
Q Consensus 76 ~~~~~~-~--~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~ 126 (297)
.+|+++ + .+.|+|+.|+|...+. ..+...|+. ...+++--.-+.+.+
T Consensus 85 y~d~~~ll~~~~vD~V~I~tp~~~H~-~~~~~al~a---GkhVl~EKP~a~~~~ 134 (412)
T 4gqa_A 85 YGDWRELVNDPQVDVVDITSPNHLHY-TMAMAAIAA---GKHVYCEKPLAVNEQ 134 (412)
T ss_dssp ESSHHHHHHCTTCCEEEECSCGGGHH-HHHHHHHHT---TCEEEEESCSCSSHH
T ss_pred ECCHHHHhcCCCCCEEEECCCcHHHH-HHHHHHHHc---CCCeEeecCCcCCHH
Confidence 677777 4 3689999999988763 222233332 234666444444443
No 271
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=97.50 E-value=0.00098 Score=60.74 Aligned_cols=76 Identities=14% Similarity=0.204 Sum_probs=53.7
Q ss_pred CcEEEEECCChhHHHHHHHHHHC-CCcE-EEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEec----C
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMD-GLDV-WLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTS----N 78 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~-G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~----~ 78 (297)
..||+|||+|.||...+..+... |++| .++|+++++++.+.+.+. +.|. ......+ |
T Consensus 20 ~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~-------~~g~----------~~~~~~~~~~~~ 82 (444)
T 2ixa_A 20 KVRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILK-------KNGK----------KPAKVFGNGNDD 82 (444)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHH-------HTTC----------CCCEEECSSTTT
T ss_pred CceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHH-------hcCC----------CCCceeccCCCC
Confidence 35899999999999999888774 6775 488999988776533211 1221 0123455 7
Q ss_pred ccc-cc--CCcEEEEecccCHH
Q 022407 79 LKD-LH--SADIIVEAIVESED 97 (297)
Q Consensus 79 ~~~-~~--~aD~Vi~~v~e~~~ 97 (297)
+++ ++ +.|+|++|+|...+
T Consensus 83 ~~~ll~~~~vD~V~i~tp~~~h 104 (444)
T 2ixa_A 83 YKNMLKDKNIDAVFVSSPWEWH 104 (444)
T ss_dssp HHHHTTCTTCCEEEECCCGGGH
T ss_pred HHHHhcCCCCCEEEEcCCcHHH
Confidence 776 54 58999999998775
No 272
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.50 E-value=0.00016 Score=61.33 Aligned_cols=100 Identities=15% Similarity=0.216 Sum_probs=57.7
Q ss_pred CcEEEEEC-CChhHHHHHHHHHHC-CCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc
Q 022407 5 MKVMGVVG-SGQMGSGIAQLGVMD-GLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD 81 (297)
Q Consensus 5 ~~~V~iiG-~G~mG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 81 (297)
++||+|+| +|.||+.++..+.+. ++++. ++|++...... ...+.+. .....+.+++|+++
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G------------~d~gel~-----g~~~gv~v~~dl~~ 69 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLG------------QDAGAFL-----GKQTGVALTDDIER 69 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTT------------SBTTTTT-----TCCCSCBCBCCHHH
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCccccc------------ccHHHHh-----CCCCCceecCCHHH
Confidence 46999999 799999999988764 67766 47887532100 0011110 00113455677776
Q ss_pred -ccCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHH
Q 022407 82 -LHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISIT 126 (297)
Q Consensus 82 -~~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~ 126 (297)
++++|+||++.+.+. ....+...+..+.-+++.|.+++.+
T Consensus 70 ll~~~DVVIDfT~p~a-----~~~~~~~al~~G~~vVigTTG~s~~ 110 (272)
T 4f3y_A 70 VCAEADYLIDFTLPEG-----TLVHLDAALRHDVKLVIGTTGFSEP 110 (272)
T ss_dssp HHHHCSEEEECSCHHH-----HHHHHHHHHHHTCEEEECCCCCCHH
T ss_pred HhcCCCEEEEcCCHHH-----HHHHHHHHHHcCCCEEEECCCCCHH
Confidence 678999999875322 2222333333344344455566654
No 273
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=97.47 E-value=0.00049 Score=61.54 Aligned_cols=94 Identities=15% Similarity=0.165 Sum_probs=61.8
Q ss_pred cEEEEECCC-hhHHHHHHHHHHC-CCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-
Q 022407 6 KVMGVVGSG-QMGSGIAQLGVMD-GLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD- 81 (297)
Q Consensus 6 ~~V~iiG~G-~mG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~- 81 (297)
.||+|||+| .||..++..+.+. +++|. ++|+++++.+.+.+. .| +...+|+++
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~----------~g-------------~~~~~~~~el 59 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKE----------YG-------------IPVFATLAEM 59 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHH----------HT-------------CCEESSHHHH
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHH----------cC-------------CCeECCHHHH
Confidence 589999999 9999999988875 56655 889999877654211 12 235677776
Q ss_pred cc--CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHH
Q 022407 82 LH--SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISIT 126 (297)
Q Consensus 82 ~~--~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~ 126 (297)
++ +.|+|++|+|...+. ..+...++. ...+++....+.+.+
T Consensus 60 l~~~~vD~V~i~tp~~~H~-~~~~~al~a---Gk~Vl~EKP~a~~~~ 102 (387)
T 3moi_A 60 MQHVQMDAVYIASPHQFHC-EHVVQASEQ---GLHIIVEKPLTLSRD 102 (387)
T ss_dssp HHHSCCSEEEECSCGGGHH-HHHHHHHHT---TCEEEECSCCCSCHH
T ss_pred HcCCCCCEEEEcCCcHHHH-HHHHHHHHC---CCceeeeCCccCCHH
Confidence 44 599999999987753 222222332 234565444455543
No 274
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=97.46 E-value=0.00026 Score=57.56 Aligned_cols=38 Identities=21% Similarity=0.402 Sum_probs=34.3
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVR 43 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~ 43 (297)
|||.|.|+ |.+|+.++..|++.|++|++++|++++++.
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~ 39 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQ 39 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHH
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhh
Confidence 47999996 999999999999999999999999876554
No 275
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=97.44 E-value=0.00035 Score=57.11 Aligned_cols=39 Identities=10% Similarity=0.233 Sum_probs=34.0
Q ss_pred CcEEEEECC-ChhHHHHHHHHH-HCCCcEEEEeCCHH-HHHH
Q 022407 5 MKVMGVVGS-GQMGSGIAQLGV-MDGLDVWLVDTDPD-ALVR 43 (297)
Q Consensus 5 ~~~V~iiG~-G~mG~~iA~~l~-~~G~~V~~~d~~~~-~~~~ 43 (297)
+++|.|.|+ |.+|..++..|+ +.|++|++.+|+++ +++.
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~ 46 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPP 46 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCH
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchh
Confidence 346999996 999999999999 89999999999987 6544
No 276
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=97.43 E-value=0.0059 Score=51.21 Aligned_cols=109 Identities=17% Similarity=0.241 Sum_probs=77.4
Q ss_pred eEEecC-cccccCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHHHHh---hhcCCC-CeEEEeecCCCC
Q 022407 73 LRCTSN-LKDLHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLA---SATSRP-CQVIGMHFMNPP 147 (297)
Q Consensus 73 i~~~~~-~~~~~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~~l~---~~~~~~-~~~~g~h~~~p~ 147 (297)
+++++| .+.++++|++|...|-... ...+.+++.+++++++||+ ||.++++..+. +.+.+. ..+..+||-.-|
T Consensus 129 VkVtsDD~EAvk~AEi~IlftPfG~~-t~~Iakkii~~lpEgAII~-nTCTipp~~ly~~le~l~R~DvgIsS~HPaaVP 206 (358)
T 2b0j_A 129 LKVTSDDREAVEGADIVITWLPKGNK-QPDIIKKFADAIPEGAIVT-HACTIPTTKFAKIFKDLGREDLNITSYHPGCVP 206 (358)
T ss_dssp CEEESCHHHHHTTCSEEEECCTTCTT-HHHHHHHHGGGSCTTCEEE-ECSSSCHHHHHHHHHHTTCTTSEEEECBCSSCT
T ss_pred cEeecchHHHhcCCCEEEEecCCCCC-cHHHHHHHHhhCcCCCEEe-cccCCCHHHHHHHHHHhCcccCCeeccCCCCCC
Confidence 455554 4559999999999987542 3478889999999999997 67777764333 334443 456677776655
Q ss_pred CCCcceeEecCCCChHHHHHHHHHHHHHhCCeEEEec
Q 022407 148 PLMKLVEVIRGADTSDETFRATKALAERFGKTVVCSQ 184 (297)
Q Consensus 148 ~~~~~vev~~~~~~~~~~~~~~~~l~~~lG~~~v~~~ 184 (297)
...+.+-+-.+ -.+++.++++..+.+..|+.++.+.
T Consensus 207 gt~Gq~~~g~~-yAtEEqIeklveLaksa~k~ay~vP 242 (358)
T 2b0j_A 207 EMKGQVYIAEG-YASEEAVNKLYEIGKIARGKAFKMP 242 (358)
T ss_dssp TTCCCEEEEES-SSCHHHHHHHHHHHHHHHSCEEEEE
T ss_pred CCCCccccccc-cCCHHHHHHHHHHHHHhCCCeEecc
Confidence 44333333333 3678899999999999999999873
No 277
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=97.41 E-value=0.00072 Score=59.35 Aligned_cols=96 Identities=11% Similarity=0.074 Sum_probs=62.5
Q ss_pred CcEEEEECCC-hhHHHHHHHHHHC--CCcE-EEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcc
Q 022407 5 MKVMGVVGSG-QMGSGIAQLGVMD--GLDV-WLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLK 80 (297)
Q Consensus 5 ~~~V~iiG~G-~mG~~iA~~l~~~--G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 80 (297)
..||+|||+| .||...+..+.+. +++| .++|+++++++++.+. .|. ....+|++
T Consensus 18 ~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~----------~~~------------~~~~~~~~ 75 (340)
T 1zh8_A 18 KIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKM----------VGN------------PAVFDSYE 75 (340)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHH----------HSS------------CEEESCHH
T ss_pred ceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHH----------hCC------------CcccCCHH
Confidence 4689999999 8999999988875 4665 5899999887665221 121 14667777
Q ss_pred c-cc--CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHH
Q 022407 81 D-LH--SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISIT 126 (297)
Q Consensus 81 ~-~~--~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~ 126 (297)
+ ++ +.|+|++|+|...+. ..+...++. ...+++.-..+.+..
T Consensus 76 ~ll~~~~vD~V~i~tp~~~H~-~~~~~al~a---GkhVl~EKPla~~~~ 120 (340)
T 1zh8_A 76 ELLESGLVDAVDLTLPVELNL-PFIEKALRK---GVHVICEKPISTDVE 120 (340)
T ss_dssp HHHHSSCCSEEEECCCGGGHH-HHHHHHHHT---TCEEEEESSSSSSHH
T ss_pred HHhcCCCCCEEEEeCCchHHH-HHHHHHHHC---CCcEEEeCCCCCCHH
Confidence 6 43 689999999987753 222222332 234555444444443
No 278
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=97.41 E-value=0.00037 Score=60.41 Aligned_cols=42 Identities=17% Similarity=0.367 Sum_probs=36.6
Q ss_pred cEEEEECCChhHHHHHHHHHHCCC-cEEEEeCC---HHHHHHHHHH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGL-DVWLVDTD---PDALVRATKS 47 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~-~V~~~d~~---~~~~~~~~~~ 47 (297)
+++.|+|+|-+|++++..|++.|. +|++++|+ .++++++.+.
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~ 200 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEK 200 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHH
T ss_pred CEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHH
Confidence 689999999999999999999998 89999999 7776665433
No 279
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.41 E-value=0.00023 Score=63.70 Aligned_cols=39 Identities=18% Similarity=0.072 Sum_probs=35.6
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
++|+|+|+|.+|...+..+...|.+|+++|+++++.+.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~ 211 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQV 211 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 689999999999999999999999999999998876654
No 280
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=97.40 E-value=0.00016 Score=64.16 Aligned_cols=39 Identities=23% Similarity=0.345 Sum_probs=36.5
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
++|.|+|+|.+|..++..+...|.+|+++|+++++++.+
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~ 206 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYL 206 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHH
Confidence 689999999999999999999999999999999887765
No 281
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=97.39 E-value=0.00026 Score=62.31 Aligned_cols=70 Identities=14% Similarity=0.131 Sum_probs=48.1
Q ss_pred cEEEEECCChhHHHHHHH-H-H-HCCCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc
Q 022407 6 KVMGVVGSGQMGSGIAQL-G-V-MDGLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD 81 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~-l-~-~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 81 (297)
.||+|||+|.||..+... + . ..+++|+ ++|+++++.+.. .+ ...+...+|+++
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~-----------~~------------~~~~~~~~~~~~ 59 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQA-----------PI------------YSHIHFTSDLDE 59 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGS-----------GG------------GTTCEEESCTHH
T ss_pred eEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHH-----------Hh------------cCCCceECCHHH
Confidence 589999999999874433 3 3 2477777 899987754221 01 112356778877
Q ss_pred -cc--CCcEEEEecccCHHH
Q 022407 82 -LH--SADIIVEAIVESEDV 98 (297)
Q Consensus 82 -~~--~aD~Vi~~v~e~~~~ 98 (297)
++ +.|+|+.|+|...+.
T Consensus 60 ll~~~~~D~V~i~tp~~~h~ 79 (345)
T 3f4l_A 60 VLNDPDVKLVVVCTHADSHF 79 (345)
T ss_dssp HHTCTTEEEEEECSCGGGHH
T ss_pred HhcCCCCCEEEEcCChHHHH
Confidence 54 489999999988763
No 282
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=97.39 E-value=0.0008 Score=61.22 Aligned_cols=73 Identities=15% Similarity=0.077 Sum_probs=53.6
Q ss_pred CcEEEEECC----ChhHHHHHHHHHHC--CCcE-EEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEec
Q 022407 5 MKVMGVVGS----GQMGSGIAQLGVMD--GLDV-WLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTS 77 (297)
Q Consensus 5 ~~~V~iiG~----G~mG~~iA~~l~~~--G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 77 (297)
..||+|||+ |.||..++..|.+. +++| .++|+++++.+.+.+ +.|. ..+...+
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~----------~~g~----------~~~~~~~ 79 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQ----------RLKL----------SNATAFP 79 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHH----------HTTC----------TTCEEES
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHH----------HcCC----------CcceeeC
Confidence 368999999 99999999999886 7776 589999987665421 1121 1124567
Q ss_pred Cccc-cc--CCcEEEEecccCHH
Q 022407 78 NLKD-LH--SADIIVEAIVESED 97 (297)
Q Consensus 78 ~~~~-~~--~aD~Vi~~v~e~~~ 97 (297)
++++ ++ +.|+|++|+|...+
T Consensus 80 ~~~~ll~~~~vD~V~i~tp~~~H 102 (438)
T 3btv_A 80 TLESFASSSTIDMIVIAIQVASH 102 (438)
T ss_dssp SHHHHHHCSSCSEEEECSCHHHH
T ss_pred CHHHHhcCCCCCEEEEeCCcHHH
Confidence 7776 43 68999999997765
No 283
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=97.39 E-value=0.00053 Score=58.10 Aligned_cols=72 Identities=21% Similarity=0.276 Sum_probs=54.5
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccccc
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGL-DVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLH 83 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 83 (297)
-+++.|+|+|-.+++++..|++.|. +|++++|+.++.+.+.+.+.... ..+......+.++
T Consensus 125 ~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~la~~~~~~~------------------~~~~~~~~~~~~~ 186 (269)
T 3tum_A 125 GKRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELLGNGF------------------PGLTVSTQFSGLE 186 (269)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHHC------------------TTCEEESCCSCST
T ss_pred cCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHHHhccC------------------Ccceehhhhhhhh
Confidence 3689999999999999999999996 79999999998877654433211 1123444455578
Q ss_pred CCcEEEEeccc
Q 022407 84 SADIIVEAIVE 94 (297)
Q Consensus 84 ~aD~Vi~~v~e 94 (297)
++|+||.|.|-
T Consensus 187 ~~dliiNaTp~ 197 (269)
T 3tum_A 187 DFDLVANASPV 197 (269)
T ss_dssp TCSEEEECSST
T ss_pred cccccccCCcc
Confidence 89999998863
No 284
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=97.38 E-value=0.00038 Score=59.37 Aligned_cols=101 Identities=16% Similarity=0.129 Sum_probs=58.1
Q ss_pred CcEEEEEC-CChhHHHHHHHHHH-CCCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc
Q 022407 5 MKVMGVVG-SGQMGSGIAQLGVM-DGLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD 81 (297)
Q Consensus 5 ~~~V~iiG-~G~mG~~iA~~l~~-~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 81 (297)
..||+|+| +|.||+.++..+.+ .++++. ++|+++..... .+.|.+ .......+.+++|+++
T Consensus 21 ~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G------------~d~gel----~G~~~~gv~v~~dl~~ 84 (288)
T 3ijp_A 21 SMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVD------------KDASIL----IGSDFLGVRITDDPES 84 (288)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTT------------SBGGGG----TTCSCCSCBCBSCHHH
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccc------------cchHHh----hccCcCCceeeCCHHH
Confidence 35899999 89999999998775 477755 66886431100 000000 0000123456778877
Q ss_pred -ccCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHH
Q 022407 82 -LHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISIT 126 (297)
Q Consensus 82 -~~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~ 126 (297)
+.++|+||+..+.+ ..+..+...+..+.-+++.|.+++.+
T Consensus 85 ll~~aDVvIDFT~p~-----a~~~~~~~~l~~Gv~vViGTTG~~~e 125 (288)
T 3ijp_A 85 AFSNTEGILDFSQPQ-----ASVLYANYAAQKSLIHIIGTTGFSKT 125 (288)
T ss_dssp HTTSCSEEEECSCHH-----HHHHHHHHHHHHTCEEEECCCCCCHH
T ss_pred HhcCCCEEEEcCCHH-----HHHHHHHHHHHcCCCEEEECCCCCHH
Confidence 78999999877422 22333333444444444455666653
No 285
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=97.37 E-value=0.00067 Score=58.73 Aligned_cols=41 Identities=22% Similarity=0.418 Sum_probs=35.7
Q ss_pred cEEEEECCChhHHHHHHHHHHCCC-cEEEEeCC---HHHHHHHHH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGL-DVWLVDTD---PDALVRATK 46 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~-~V~~~d~~---~~~~~~~~~ 46 (297)
+++.|+|+|-+|++++..|++.|. +|++++|+ .++++++.+
T Consensus 149 k~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~ 193 (312)
T 3t4e_A 149 KTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAK 193 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHH
Confidence 689999999999999999999998 89999999 666655533
No 286
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=97.33 E-value=0.00014 Score=59.58 Aligned_cols=40 Identities=28% Similarity=0.514 Sum_probs=34.0
Q ss_pred CCCCCcEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHH
Q 022407 1 MEEKMKVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDAL 41 (297)
Q Consensus 1 M~~~~~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~ 41 (297)
|.. +++|.|.|+ |.+|+.++..|++.|++|++.+|++++.
T Consensus 1 M~~-m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 41 (227)
T 3dhn_A 1 MEK-VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKI 41 (227)
T ss_dssp --C-CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGC
T ss_pred CCC-CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccc
Confidence 543 479999996 9999999999999999999999997653
No 287
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=97.30 E-value=0.00014 Score=59.46 Aligned_cols=77 Identities=9% Similarity=0.189 Sum_probs=46.4
Q ss_pred cEEEEECCChhHHHHHHH--HHHCCCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-
Q 022407 6 KVMGVVGSGQMGSGIAQL--GVMDGLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD- 81 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~--l~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~- 81 (297)
.+|+|||+|.+|..++.. +...|+++. ++|.++++.... -.| -.+...+++++
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~------------i~g-----------v~V~~~~dl~el 142 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGTE------------VGG-----------VPVYNLDDLEQH 142 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTCE------------ETT-----------EEEEEGGGHHHH
T ss_pred CEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhH------------hcC-----------CeeechhhHHHH
Confidence 579999999999999994 445688766 889998753211 000 01223455555
Q ss_pred ccCCcEEEEecccCHHHHHHHHHHHH
Q 022407 82 LHSADIIVEAIVESEDVKKKLFSELD 107 (297)
Q Consensus 82 ~~~aD~Vi~~v~e~~~~k~~~~~~l~ 107 (297)
+++.|+||.|+|... .+++...+.
T Consensus 143 i~~~D~ViIAvPs~~--~~ei~~~l~ 166 (215)
T 2vt3_A 143 VKDESVAILTVPAVA--AQSITDRLV 166 (215)
T ss_dssp CSSCCEEEECSCHHH--HHHHHHHHH
T ss_pred HHhCCEEEEecCchh--HHHHHHHHH
Confidence 555599999998655 334554443
No 288
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=97.29 E-value=0.0016 Score=53.62 Aligned_cols=39 Identities=13% Similarity=0.028 Sum_probs=35.6
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
++|.|.|+ |.+|+.++..|++.|++|++.+|++++++..
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~ 61 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPEL 61 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHH
T ss_pred CeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHH
Confidence 68999998 9999999999999999999999998876554
No 289
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=97.24 E-value=0.00037 Score=63.62 Aligned_cols=40 Identities=15% Similarity=0.136 Sum_probs=35.7
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
.++|.|+|+|.+|+.++..|++.|++|+++||++++++.+
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~l 42 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKL 42 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHH
Confidence 3689999999999999999999999999999998776543
No 290
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=97.24 E-value=0.0011 Score=57.90 Aligned_cols=35 Identities=26% Similarity=0.353 Sum_probs=31.9
Q ss_pred CCcEEEEECCChhHHH-HHHHHHHCCCcEEEEeCCH
Q 022407 4 KMKVMGVVGSGQMGSG-IAQLGVMDGLDVWLVDTDP 38 (297)
Q Consensus 4 ~~~~V~iiG~G~mG~~-iA~~l~~~G~~V~~~d~~~ 38 (297)
.+++|.|||.|.+|.+ +|..|.+.|++|+++|.++
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 4689999999999995 9999999999999999865
No 291
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=97.23 E-value=0.00071 Score=56.78 Aligned_cols=33 Identities=24% Similarity=0.342 Sum_probs=30.2
Q ss_pred cEEEEECCChhHHHHHHHHHHCCC-cEEEEeCCH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGL-DVWLVDTDP 38 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~-~V~~~d~~~ 38 (297)
.+|.|||+|.+|+.++..|+.+|. +++++|.+.
T Consensus 29 ~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred CcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 589999999999999999999998 789998764
No 292
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=97.22 E-value=0.0028 Score=55.58 Aligned_cols=86 Identities=17% Similarity=0.215 Sum_probs=48.1
Q ss_pred cEEEEECCChhHHHHHHHHHHC-CCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCC-Chhhh-cccCCceEEecCccc
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMD-GLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQL-SQAMG-TDAPRRLRCTSNLKD 81 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~-~~~~~~i~~~~~~~~ 81 (297)
.||+|+|+|.+|+.++..+..+ +++|. +.|.+++....+.++- .....|.+ ...+. ......+.+..+.++
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~~~~~~~~l~~~d-----g~s~~g~~~~~~~v~~~~~~~l~v~~~~~~ 77 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSMQDDMEVIGVTKTKPDFEARLAVEK-----GYKLFVAIPDNERVKLFEDAGIPVEGTILD 77 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSSEEEEEEEESSCSHHHHHHHHT-----TCCEEESSCCHHHHHHHHHTTCCCCCBGGG
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhc-----CCccccccCCCceeecccCCeEEECCchHH
Confidence 5899999999999999998876 56755 5576655544432210 00000111 00000 000011223333444
Q ss_pred -ccCCcEEEEecccCH
Q 022407 82 -LHSADIIVEAIVESE 96 (297)
Q Consensus 82 -~~~aD~Vi~~v~e~~ 96 (297)
..++|+|++|.+...
T Consensus 78 ~~~~vDiV~eatg~~~ 93 (343)
T 2yyy_A 78 IIEDADIVVDGAPKKI 93 (343)
T ss_dssp TGGGCSEEEECCCTTH
T ss_pred hccCCCEEEECCCccc
Confidence 468999999998665
No 293
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.20 E-value=0.00021 Score=65.49 Aligned_cols=40 Identities=13% Similarity=0.061 Sum_probs=35.9
Q ss_pred CcEEEEECCChhHHHHHHHHHHC-CCcEEEEeCCHHHHHHH
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMD-GLDVWLVDTDPDALVRA 44 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~-G~~V~~~d~~~~~~~~~ 44 (297)
.++|.|+|+|.+|+.++..|++. |++|++++|++++++.+
T Consensus 23 ~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~l 63 (467)
T 2axq_A 23 GKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQAL 63 (467)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHH
T ss_pred CCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHH
Confidence 46899999999999999999988 79999999999877654
No 294
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=97.19 E-value=0.0013 Score=56.94 Aligned_cols=39 Identities=21% Similarity=0.381 Sum_probs=30.1
Q ss_pred CCCCCcEEEEECCChhHHHHHHHHHH--CCCcE-EEEeCCHHH
Q 022407 1 MEEKMKVMGVVGSGQMGSGIAQLGVM--DGLDV-WLVDTDPDA 40 (297)
Q Consensus 1 M~~~~~~V~iiG~G~mG~~iA~~l~~--~G~~V-~~~d~~~~~ 40 (297)
|++ ..||+|||+|.+|..++..+.+ .+.++ .++|+++++
T Consensus 1 M~~-~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~ 42 (312)
T 1nvm_B 1 MNQ-KLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAAS 42 (312)
T ss_dssp CCS-CEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTC
T ss_pred CCC-CCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhh
Confidence 543 3689999999999999998865 35554 478998765
No 295
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=97.19 E-value=0.0013 Score=59.48 Aligned_cols=73 Identities=15% Similarity=0.252 Sum_probs=50.6
Q ss_pred cEEEEECCCh---hHHHHHHHHHHCC-CcEE--EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCc
Q 022407 6 KVMGVVGSGQ---MGSGIAQLGVMDG-LDVW--LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNL 79 (297)
Q Consensus 6 ~~V~iiG~G~---mG~~iA~~l~~~G-~~V~--~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 79 (297)
.||+|||+|. ||...+..+...+ ++|+ ++|+++++++++.+. .|. . ...+.+|+
T Consensus 38 ~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~----------~g~-~---------~~~~~~~~ 97 (417)
T 3v5n_A 38 IRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRE----------LGL-D---------PSRVYSDF 97 (417)
T ss_dssp EEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHH----------HTC-C---------GGGBCSCH
T ss_pred ceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHH----------cCC-C---------cccccCCH
Confidence 5899999999 9999888877765 6765 679999887665221 121 0 01245677
Q ss_pred cc-cc-------CCcEEEEecccCHHH
Q 022407 80 KD-LH-------SADIIVEAIVESEDV 98 (297)
Q Consensus 80 ~~-~~-------~aD~Vi~~v~e~~~~ 98 (297)
++ ++ +.|+|++|+|...+.
T Consensus 98 ~~ll~~~~~~~~~vD~V~I~tp~~~H~ 124 (417)
T 3v5n_A 98 KEMAIREAKLKNGIEAVAIVTPNHVHY 124 (417)
T ss_dssp HHHHHHHHHCTTCCSEEEECSCTTSHH
T ss_pred HHHHhcccccCCCCcEEEECCCcHHHH
Confidence 66 44 489999999988763
No 296
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=97.15 E-value=0.00094 Score=57.18 Aligned_cols=33 Identities=30% Similarity=0.432 Sum_probs=30.8
Q ss_pred cEEEEECCChhHHHHHHHHHHCCC-cEEEEeCCH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGL-DVWLVDTDP 38 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~-~V~~~d~~~ 38 (297)
.+|.|||+|.+|+.+|..|+.+|. +++++|.+.
T Consensus 37 ~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 37 FAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 589999999999999999999997 799999876
No 297
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=97.14 E-value=0.0039 Score=56.85 Aligned_cols=34 Identities=29% Similarity=0.240 Sum_probs=31.7
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCH
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDP 38 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~ 38 (297)
.++|.|||.|..|.+.|..|.+.|++|+++|.++
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 3799999999999999999999999999999865
No 298
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=97.13 E-value=0.0013 Score=59.00 Aligned_cols=73 Identities=16% Similarity=0.166 Sum_probs=51.9
Q ss_pred cEEEEECCCh---hHHHHHHHHHHCC-CcEE--EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCc
Q 022407 6 KVMGVVGSGQ---MGSGIAQLGVMDG-LDVW--LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNL 79 (297)
Q Consensus 6 ~~V~iiG~G~---mG~~iA~~l~~~G-~~V~--~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 79 (297)
.||+|||+|. ||...+..+...+ ++|+ ++|+++++.+.+.+ +.|. . ...+.+|+
T Consensus 13 ~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~----------~~g~-~---------~~~~~~~~ 72 (398)
T 3dty_A 13 IRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGE----------QLGV-D---------SERCYADY 72 (398)
T ss_dssp EEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHH----------HTTC-C---------GGGBCSSH
T ss_pred ceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHH----------HhCC-C---------cceeeCCH
Confidence 5899999999 9999988877665 6766 57999988766521 1221 0 01245677
Q ss_pred cc-cc-------CCcEEEEecccCHHH
Q 022407 80 KD-LH-------SADIIVEAIVESEDV 98 (297)
Q Consensus 80 ~~-~~-------~aD~Vi~~v~e~~~~ 98 (297)
++ ++ +.|+|+.|+|...+.
T Consensus 73 ~~ll~~~~~~~~~vD~V~i~tp~~~H~ 99 (398)
T 3dty_A 73 LSMFEQEARRADGIQAVSIATPNGTHY 99 (398)
T ss_dssp HHHHHHHTTCTTCCSEEEEESCGGGHH
T ss_pred HHHHhcccccCCCCCEEEECCCcHHHH
Confidence 66 43 489999999988763
No 299
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=97.08 E-value=0.0031 Score=57.98 Aligned_cols=72 Identities=13% Similarity=0.090 Sum_probs=53.2
Q ss_pred cEEEEECC----ChhHHHHHHHHHHC--CCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecC
Q 022407 6 KVMGVVGS----GQMGSGIAQLGVMD--GLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSN 78 (297)
Q Consensus 6 ~~V~iiG~----G~mG~~iA~~l~~~--G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 78 (297)
.||+|||+ |.||...+..|.+. +++|+ ++|+++++++.+.+ +.|. ......+|
T Consensus 40 irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~----------~~g~----------~~~~~~~d 99 (479)
T 2nvw_A 40 IRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIE----------QLQL----------KHATGFDS 99 (479)
T ss_dssp EEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHH----------HTTC----------TTCEEESC
T ss_pred CEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHH----------HcCC----------CcceeeCC
Confidence 58999999 99999999999875 77754 89999987766521 1121 11246677
Q ss_pred ccc-c--cCCcEEEEecccCHH
Q 022407 79 LKD-L--HSADIIVEAIVESED 97 (297)
Q Consensus 79 ~~~-~--~~aD~Vi~~v~e~~~ 97 (297)
+++ + .+.|+|++|+|...+
T Consensus 100 ~~ell~~~~vD~V~I~tp~~~H 121 (479)
T 2nvw_A 100 LESFAQYKDIDMIVVSVKVPEH 121 (479)
T ss_dssp HHHHHHCTTCSEEEECSCHHHH
T ss_pred HHHHhcCCCCCEEEEcCCcHHH
Confidence 776 4 369999999997765
No 300
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=97.08 E-value=0.0017 Score=58.81 Aligned_cols=86 Identities=21% Similarity=0.297 Sum_probs=53.8
Q ss_pred cEEEEECCChhHHHHHHHHHH----------CCCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceE
Q 022407 6 KVMGVVGSGQMGSGIAQLGVM----------DGLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLR 74 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~----------~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~ 74 (297)
.||+|||+|.+|..++..+.+ .+++|. ++|+++++.+.. .. + ..
T Consensus 11 irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~-----------~~-~-------------~~ 65 (444)
T 3mtj_A 11 IHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEAL-----------AG-G-------------LP 65 (444)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHH-----------HT-T-------------CC
T ss_pred ccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhh-----------cc-c-------------Cc
Confidence 589999999999999877653 244444 778988764332 11 1 23
Q ss_pred EecCccc-cc--CCcEEEEeccc-CHHHHHHHHHHHHhhccCCeEEeecC
Q 022407 75 CTSNLKD-LH--SADIIVEAIVE-SEDVKKKLFSELDKITKASAILASNT 120 (297)
Q Consensus 75 ~~~~~~~-~~--~aD~Vi~~v~e-~~~~k~~~~~~l~~~~~~~~ii~s~t 120 (297)
+++|+++ ++ +.|+|++|+|. ..+ ...+...|+. ...+++.|.
T Consensus 66 ~~~d~~ell~d~diDvVve~tp~~~~h-~~~~~~AL~a---GKhVvtenk 111 (444)
T 3mtj_A 66 LTTNPFDVVDDPEIDIVVELIGGLEPA-RELVMQAIAN---GKHVVTANK 111 (444)
T ss_dssp EESCTHHHHTCTTCCEEEECCCSSTTH-HHHHHHHHHT---TCEEEECCH
T ss_pred ccCCHHHHhcCCCCCEEEEcCCCchHH-HHHHHHHHHc---CCEEEECCc
Confidence 6677776 43 68999999986 443 2223333332 334555454
No 301
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=97.07 E-value=0.00047 Score=57.03 Aligned_cols=32 Identities=28% Similarity=0.405 Sum_probs=30.1
Q ss_pred EEEEECCChhHHHHHHHHHHCCCcEEEEeCCH
Q 022407 7 VMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDP 38 (297)
Q Consensus 7 ~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~ 38 (297)
.|+|||+|.-|...|..|+++|++|+++|+++
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~ 35 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 49999999999999999999999999999764
No 302
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=97.06 E-value=0.00048 Score=57.00 Aligned_cols=38 Identities=18% Similarity=0.287 Sum_probs=33.6
Q ss_pred CCcEEEEECC-ChhHHHHHHHHHHCC-CcEEEEeCCHHHH
Q 022407 4 KMKVMGVVGS-GQMGSGIAQLGVMDG-LDVWLVDTDPDAL 41 (297)
Q Consensus 4 ~~~~V~iiG~-G~mG~~iA~~l~~~G-~~V~~~d~~~~~~ 41 (297)
++++|.|.|+ |.+|+.++..|++.| ++|++++|+++++
T Consensus 22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~ 61 (236)
T 3qvo_A 22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKI 61 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGS
T ss_pred cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhh
Confidence 3578999995 999999999999999 8999999998753
No 303
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=97.05 E-value=0.0038 Score=54.40 Aligned_cols=33 Identities=18% Similarity=0.229 Sum_probs=30.4
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCC-------cEEEEeCCH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGL-------DVWLVDTDP 38 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~-------~V~~~d~~~ 38 (297)
+||.|+|+ |.+|+.++..|+..|+ +|+++|+++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~ 45 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQ 45 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGG
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCC
Confidence 68999997 9999999999999996 899999975
No 304
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=97.01 E-value=0.0006 Score=59.58 Aligned_cols=84 Identities=20% Similarity=0.295 Sum_probs=53.6
Q ss_pred cEEEEECCChhHHHHHHHHHHC---------CCcE-EEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEE
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMD---------GLDV-WLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRC 75 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~---------G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 75 (297)
.||+|||+|.||+.++..+.+. +.+| .++|++.++. ++ +. .-.+
T Consensus 4 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~----------------~~-~~---------~~~~ 57 (332)
T 2ejw_A 4 LKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKP----------------RA-IP---------QELL 57 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSC----------------CS-SC---------GGGE
T ss_pred eEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHh----------------hc-cC---------cccc
Confidence 5899999999999999998875 3454 4778875421 11 10 1135
Q ss_pred ecCccc-ccCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeec
Q 022407 76 TSNLKD-LHSADIIVEAIVESEDVKKKLFSELDKITKASAILASN 119 (297)
Q Consensus 76 ~~~~~~-~~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ 119 (297)
++|+++ + +.|+|++|.+........+.+.|+. ...+++.|
T Consensus 58 ~~d~~~ll-~iDvVve~t~~~~~a~~~~~~AL~a---GKhVVtaN 98 (332)
T 2ejw_A 58 RAEPFDLL-EADLVVEAMGGVEAPLRLVLPALEA---GIPLITAN 98 (332)
T ss_dssp ESSCCCCT-TCSEEEECCCCSHHHHHHHHHHHHT---TCCEEECC
T ss_pred cCCHHHHh-CCCEEEECCCCcHHHHHHHHHHHHc---CCeEEECC
Confidence 677777 5 9999999998764333333333433 23455544
No 305
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=97.00 E-value=0.0034 Score=52.34 Aligned_cols=32 Identities=22% Similarity=0.419 Sum_probs=26.7
Q ss_pred cEEEEECC-ChhHHHHHHHHHHC-CCcEE-EEeCC
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMD-GLDVW-LVDTD 37 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~-G~~V~-~~d~~ 37 (297)
+||+|+|+ |.||+.++..+... |++|. ++|++
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~ 35 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG 35 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC
Confidence 38999997 99999999998765 89877 66654
No 306
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=96.99 E-value=0.0026 Score=55.05 Aligned_cols=70 Identities=10% Similarity=-0.050 Sum_probs=50.8
Q ss_pred CcEEEEECC-ChhHHHHHHHHHHCCCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-
Q 022407 5 MKVMGVVGS-GQMGSGIAQLGVMDGLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD- 81 (297)
Q Consensus 5 ~~~V~iiG~-G~mG~~iA~~l~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~- 81 (297)
+.||+|||+ |.+|...+..+...+.+++ ++|+++++. .+ . .......+.+++++
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~-~~-----------~-----------~~~~~~~~~~~~~~l 59 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVG-LV-----------D-----------SFFPEAEFFTEPEAF 59 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCCG-GG-----------G-----------GTCTTCEEESCHHHH
T ss_pred ceEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHHH-HH-----------H-----------hhCCCCceeCCHHHH
Confidence 468999999 7899999999998887754 889987642 11 0 11122356667665
Q ss_pred c----------cCCcEEEEecccCHH
Q 022407 82 L----------HSADIIVEAIVESED 97 (297)
Q Consensus 82 ~----------~~aD~Vi~~v~e~~~ 97 (297)
+ .+.|+|+.|+|...+
T Consensus 60 l~~~~~l~~~~~~vD~V~I~tP~~~H 85 (312)
T 3o9z_A 60 EAYLEDLRDRGEGVDYLSIASPNHLH 85 (312)
T ss_dssp HHHHHHHHHTTCCCSEEEECSCGGGH
T ss_pred HHHhhhhcccCCCCcEEEECCCchhh
Confidence 3 578999999998776
No 307
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=96.98 E-value=0.0014 Score=57.30 Aligned_cols=82 Identities=23% Similarity=0.322 Sum_probs=49.7
Q ss_pred cEEEEECCChhHHHHHHHHHHC-CCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCC-CC---hhhhcc-cCCceEEecC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMD-GLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQ-LS---QAMGTD-APRRLRCTSN 78 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~-~~---~~~~~~-~~~~i~~~~~ 78 (297)
.||+|+|+|.||..++..+... +.+|. +.|++++.+..+.+ ..|. .. +..... ....+.+..+
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~----------~~g~~~~~~~~~~v~~~~~~~~~v~~d 72 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAK----------ELGIPVYAASEEFIPRFEKEGFEVAGT 72 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHH----------HTTCCEEESSGGGHHHHHHHTCCCSCB
T ss_pred cEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHH----------hcCccccccccccceeccCCceEEcCc
Confidence 5899999999999999998875 45654 67887666554321 1110 00 000000 0001233445
Q ss_pred ccc-ccCCcEEEEecccCHH
Q 022407 79 LKD-LHSADIIVEAIVESED 97 (297)
Q Consensus 79 ~~~-~~~aD~Vi~~v~e~~~ 97 (297)
+++ +.++|+|++|.|...+
T Consensus 73 ~~~l~~~vDvV~~aTp~~~h 92 (334)
T 2czc_A 73 LNDLLEKVDIIVDATPGGIG 92 (334)
T ss_dssp HHHHHTTCSEEEECCSTTHH
T ss_pred HHHhccCCCEEEECCCcccc
Confidence 555 5689999999998765
No 308
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=96.98 E-value=0.0005 Score=61.29 Aligned_cols=34 Identities=21% Similarity=0.363 Sum_probs=31.5
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPD 39 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~ 39 (297)
+||.|||+|.-|..+|..|+++|++|+++|++++
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~ 35 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSA 35 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 6899999999999999999999999999997543
No 309
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=96.97 E-value=0.0038 Score=55.42 Aligned_cols=70 Identities=14% Similarity=0.202 Sum_probs=47.6
Q ss_pred EEEEECCChhHHHHHHHHHH--------CCCcE-EEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEec
Q 022407 7 VMGVVGSGQMGSGIAQLGVM--------DGLDV-WLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTS 77 (297)
Q Consensus 7 ~V~iiG~G~mG~~iA~~l~~--------~G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 77 (297)
||||||+|.||..-+..+.. .+.+| .++|+++++++++.+. .|. -.+.+
T Consensus 27 rvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~----------~g~------------~~~y~ 84 (393)
T 4fb5_A 27 GIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGE----------FGF------------EKATA 84 (393)
T ss_dssp EEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHH----------HTC------------SEEES
T ss_pred cEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHH----------hCC------------CeecC
Confidence 89999999999876665432 24554 4889999887765221 121 14677
Q ss_pred Cccc-c--cCCcEEEEecccCHHH
Q 022407 78 NLKD-L--HSADIIVEAIVESEDV 98 (297)
Q Consensus 78 ~~~~-~--~~aD~Vi~~v~e~~~~ 98 (297)
|+++ + .+.|+|+.|+|...+.
T Consensus 85 d~~ell~~~~iDaV~IatP~~~H~ 108 (393)
T 4fb5_A 85 DWRALIADPEVDVVSVTTPNQFHA 108 (393)
T ss_dssp CHHHHHHCTTCCEEEECSCGGGHH
T ss_pred CHHHHhcCCCCcEEEECCChHHHH
Confidence 8777 4 4689999999988864
No 310
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=96.97 E-value=0.0028 Score=55.03 Aligned_cols=95 Identities=9% Similarity=0.032 Sum_probs=60.1
Q ss_pred CcEEEEECC-ChhHHHHHHHHHHCCCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-
Q 022407 5 MKVMGVVGS-GQMGSGIAQLGVMDGLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD- 81 (297)
Q Consensus 5 ~~~V~iiG~-G~mG~~iA~~l~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~- 81 (297)
+.||+|||+ |.||...+..+...|.++. ++|+++++. .+ . .......+.+++++
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~-~~-----------~-----------~~~~~~~~~~~~~~l 59 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSVG-II-----------D-----------SISPQSEFFTEFEFF 59 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCCG-GG-----------G-----------GTCTTCEEESSHHHH
T ss_pred ceEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHHH-HH-----------H-----------hhCCCCcEECCHHHH
Confidence 469999999 7999999999998887654 889887642 11 0 11122356667665
Q ss_pred c-----------cCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHH
Q 022407 82 L-----------HSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISIT 126 (297)
Q Consensus 82 ~-----------~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~ 126 (297)
+ .+.|+|+.|+|...+.. .+...++. ...+++--.-+.+.+
T Consensus 60 l~~~~~l~~~~~~~vD~V~I~tP~~~H~~-~~~~al~a---GkhVl~EKPla~~~~ 111 (318)
T 3oa2_A 60 LDHASNLKRDSATALDYVSICSPNYLHYP-HIAAGLRL---GCDVICEKPLVPTPE 111 (318)
T ss_dssp HHHHHHHTTSTTTSCCEEEECSCGGGHHH-HHHHHHHT---TCEEEECSSCCSCHH
T ss_pred HHhhhhhhhccCCCCcEEEECCCcHHHHH-HHHHHHHC---CCeEEEECCCcCCHH
Confidence 3 46899999999877632 22222332 234555444444443
No 311
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=96.95 E-value=0.0046 Score=57.10 Aligned_cols=67 Identities=21% Similarity=0.401 Sum_probs=46.8
Q ss_pred CCcEEEEECCChhHHH-HHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcccc
Q 022407 4 KMKVMGVVGSGQMGSG-IAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDL 82 (297)
Q Consensus 4 ~~~~V~iiG~G~mG~~-iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 82 (297)
.+++|.|||.|..|.+ +|..|.+.|++|+++|..+.... +.+.+.|. .+....+.+.+
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~~~----------~~l~~~gi-----------~~~~g~~~~~~ 79 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNSVT----------QHLTALGA-----------QIYFHHRPENV 79 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCHHH----------HHHHHTTC-----------EEESSCCGGGG
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCCHHH----------HHHHHCCC-----------EEECCCCHHHc
Confidence 3579999999999995 89999999999999998754221 11234443 11122344457
Q ss_pred cCCcEEEEe
Q 022407 83 HSADIIVEA 91 (297)
Q Consensus 83 ~~aD~Vi~~ 91 (297)
.++|+||.+
T Consensus 80 ~~~d~vV~S 88 (494)
T 4hv4_A 80 LDASVVVVS 88 (494)
T ss_dssp TTCSEEEEC
T ss_pred CCCCEEEEC
Confidence 889999986
No 312
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=96.93 E-value=0.0034 Score=55.35 Aligned_cols=33 Identities=21% Similarity=0.539 Sum_probs=30.4
Q ss_pred cEEEEECCChhHHHHHHHHHHCCC-cEEEEeCCH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGL-DVWLVDTDP 38 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~-~V~~~d~~~ 38 (297)
.+|.|||+|..|+.+|..|+.+|. +++++|.+.
T Consensus 119 ~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 119 AKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 589999999999999999999998 799999863
No 313
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=96.92 E-value=0.001 Score=58.61 Aligned_cols=37 Identities=30% Similarity=0.385 Sum_probs=32.6
Q ss_pred CCCCCcEEEEECCChhHHHHHHHHHHCCCcEEEEeCC
Q 022407 1 MEEKMKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTD 37 (297)
Q Consensus 1 M~~~~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~ 37 (297)
|+.....|.|||+|.+|.+.|..|+++|++|+++|+.
T Consensus 2 ~m~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~ 38 (363)
T 1c0p_A 2 MMHSQKRVVVLGSGVIGLSSALILARKGYSVHILARD 38 (363)
T ss_dssp CCCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEecc
Confidence 4444468999999999999999999999999999974
No 314
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=96.91 E-value=0.00062 Score=57.41 Aligned_cols=70 Identities=10% Similarity=0.223 Sum_probs=51.1
Q ss_pred cEEEEECCCh-hHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-cc
Q 022407 6 KVMGVVGSGQ-MGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LH 83 (297)
Q Consensus 6 ~~V~iiG~G~-mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~ 83 (297)
+++.|||.|. +|.++|..|...|..|+++++... ++++ ++
T Consensus 151 k~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~--------------------------------------~L~~~~~ 192 (276)
T 3ngx_A 151 NTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTK--------------------------------------DIGSMTR 192 (276)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS--------------------------------------CHHHHHH
T ss_pred CEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcc--------------------------------------cHHHhhc
Confidence 6899999974 899999999999999999986422 2233 56
Q ss_pred CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecC
Q 022407 84 SADIIVEAIVESEDVKKKLFSELDKITKASAILASNT 120 (297)
Q Consensus 84 ~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~t 120 (297)
.||+||.+++...-++. .+++++++++...
T Consensus 193 ~ADIVI~Avg~p~~I~~-------~~vk~GavVIDvg 222 (276)
T 3ngx_A 193 SSKIVVVAVGRPGFLNR-------EMVTPGSVVIDVG 222 (276)
T ss_dssp HSSEEEECSSCTTCBCG-------GGCCTTCEEEECC
T ss_pred cCCEEEECCCCCccccH-------hhccCCcEEEEec
Confidence 79999999975332222 3457777776433
No 315
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=96.91 E-value=0.0007 Score=60.20 Aligned_cols=69 Identities=13% Similarity=0.119 Sum_probs=49.7
Q ss_pred CcEEEEECCChhHHHHHHHHHHC--CCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMD--GLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD 81 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~--G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 81 (297)
..||+|||+| +|...+..+.+. ++++. ++|+++++.++.. .+.| +...+|+++
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a----------~~~g-------------v~~~~~~~~ 62 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELA----------HAFG-------------IPLYTSPEQ 62 (372)
T ss_dssp CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHH----------HHTT-------------CCEESSGGG
T ss_pred CCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHH----------HHhC-------------CCEECCHHH
Confidence 4689999999 798877777664 56766 8899998876652 1222 245678887
Q ss_pred -ccCCcEEEEecccCHH
Q 022407 82 -LHSADIIVEAIVESED 97 (297)
Q Consensus 82 -~~~aD~Vi~~v~e~~~ 97 (297)
+++.|+|+.++|...+
T Consensus 63 l~~~~D~v~i~~p~~~h 79 (372)
T 4gmf_A 63 ITGMPDIACIVVRSTVA 79 (372)
T ss_dssp CCSCCSEEEECCC--CT
T ss_pred HhcCCCEEEEECCCccc
Confidence 7889999999987653
No 316
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=96.90 E-value=0.0025 Score=56.75 Aligned_cols=75 Identities=17% Similarity=0.203 Sum_probs=50.7
Q ss_pred CCCCCcEEEEEC-CChhHHH-HH----HHHHHCC-CcE----------EEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCh
Q 022407 1 MEEKMKVMGVVG-SGQMGSG-IA----QLGVMDG-LDV----------WLVDTDPDALVRATKSISSSIQKFVSKGQLSQ 63 (297)
Q Consensus 1 M~~~~~~V~iiG-~G~mG~~-iA----~~l~~~G-~~V----------~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 63 (297)
|.++..||+||| +|.||.. .+ ..+.+.+ ..+ .++|+++++.+...+ +.|.
T Consensus 2 ~~~~~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~----------~~~~--- 68 (383)
T 3oqb_A 2 LTTQRLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAK----------RFNI--- 68 (383)
T ss_dssp -CCEEEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHH----------HTTC---
T ss_pred CCCceeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHH----------HhCC---
Confidence 444456899999 9999998 66 5555443 332 499999988766521 1221
Q ss_pred hhhcccCCceEEecCccc-cc--CCcEEEEecccCHH
Q 022407 64 AMGTDAPRRLRCTSNLKD-LH--SADIIVEAIVESED 97 (297)
Q Consensus 64 ~~~~~~~~~i~~~~~~~~-~~--~aD~Vi~~v~e~~~ 97 (297)
-.+.+|+++ ++ +.|+|++|+|...+
T Consensus 69 ---------~~~~~~~~~ll~~~~iD~V~i~tp~~~h 96 (383)
T 3oqb_A 69 ---------ARWTTDLDAALADKNDTMFFDAATTQAR 96 (383)
T ss_dssp ---------CCEESCHHHHHHCSSCCEEEECSCSSSS
T ss_pred ---------CcccCCHHHHhcCCCCCEEEECCCchHH
Confidence 135677776 43 58999999998765
No 317
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=96.89 E-value=0.00074 Score=55.05 Aligned_cols=36 Identities=14% Similarity=0.256 Sum_probs=32.4
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDAL 41 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~ 41 (297)
|||.|.|+ |.+|+.++..|++.|++|++.+|++++.
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~ 37 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQV 37 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGS
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccch
Confidence 47999995 9999999999999999999999998643
No 318
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=96.85 E-value=0.0011 Score=56.60 Aligned_cols=73 Identities=23% Similarity=0.272 Sum_probs=51.6
Q ss_pred cEEEEECCCh-hHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcccccC
Q 022407 6 KVMGVVGSGQ-MGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLHS 84 (297)
Q Consensus 6 ~~V~iiG~G~-mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 84 (297)
+++.|||.|. +|.++|..|...|..|+++++....++. .+.++.
T Consensus 166 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~l-----------------------------------~~~~~~ 210 (300)
T 4a26_A 166 KRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTEDM-----------------------------------IDYLRT 210 (300)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHHH-----------------------------------HHHHHT
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCchh-----------------------------------hhhhcc
Confidence 6899999876 7999999999999999999974332220 012467
Q ss_pred CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecC
Q 022407 85 ADIIVEAIVESEDVKKKLFSELDKITKASAILASNT 120 (297)
Q Consensus 85 aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~t 120 (297)
||+||.+++...-++. .+++++++++...
T Consensus 211 ADIVI~Avg~p~~I~~-------~~vk~GavVIDvg 239 (300)
T 4a26_A 211 ADIVIAAMGQPGYVKG-------EWIKEGAAVVDVG 239 (300)
T ss_dssp CSEEEECSCCTTCBCG-------GGSCTTCEEEECC
T ss_pred CCEEEECCCCCCCCcH-------HhcCCCcEEEEEe
Confidence 9999999975332222 3457777776433
No 319
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=96.85 E-value=0.0051 Score=53.69 Aligned_cols=36 Identities=6% Similarity=-0.100 Sum_probs=33.8
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALV 42 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~ 42 (297)
++|.|+|+|..|..++..|.+.|+ |+++|+++++++
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~ 151 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKK 151 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGHHH
T ss_pred CCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhhhh
Confidence 479999999999999999999999 999999999876
No 320
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=96.85 E-value=0.0053 Score=53.66 Aligned_cols=149 Identities=18% Similarity=0.272 Sum_probs=75.4
Q ss_pred cEEEEECCChhHHHHHHHHHHC-CCcEE-EEeC--CHHHHHHHHHHHHHHHHHHHHcCCCC-hhh---hcc-c---CCce
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMD-GLDVW-LVDT--DPDALVRATKSISSSIQKFVSKGQLS-QAM---GTD-A---PRRL 73 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~-G~~V~-~~d~--~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~---~~~-~---~~~i 73 (297)
.||+|+|+|.+|+.+++.+..+ +++|. +.|+ +.+.+..+.++ .-..|.+. ..- ... . -..+
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~d~~~~~~~~~~ll~y-------ds~~g~~~~~~v~~~~~~~l~~~g~~i 76 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKY-------DTVHGQWKHSDIKIKDSKTLLLGEKPV 76 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSSCHHHHHHHHHC-------CTTTCCCCSSCEEESSSSEEEETTEEE
T ss_pred eEEEEECcCHHHHHHHHHHhCCCCeEEEEEECCCCCHHHHHHhhcc-------cccCCCCCCCcEEeecCCeeEECCeEE
Confidence 5899999999999999998876 55655 4453 44443333100 01123221 100 000 0 0122
Q ss_pred EEe--cCcccc----cCCcEEEEecccCHHHHHHHHHHHHhhccCCe--EEeecCCCccHHHHhhhcCCCCeEEEeecCC
Q 022407 74 RCT--SNLKDL----HSADIIVEAIVESEDVKKKLFSELDKITKASA--ILASNTSSISITRLASATSRPCQVIGMHFMN 145 (297)
Q Consensus 74 ~~~--~~~~~~----~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~--ii~s~ts~~~~~~l~~~~~~~~~~~g~h~~~ 145 (297)
.+. .+++++ .++|+||+|.|..... +. ...++..++ +|++.++.- .|.-+.| +|
T Consensus 77 ~v~~~~dp~~l~w~~~~vDvV~eaTg~~~~~--e~---a~~~l~aGak~VVIs~pa~d----------~p~~V~g---vN 138 (337)
T 3e5r_O 77 TVFGIRNPDEIPWAEAGAEYVVESTGVFTDK--EK---AAAHLKGGAKKVVISAPSKD----------APMFVCG---VN 138 (337)
T ss_dssp EEECCSCGGGCCHHHHTCSEEEECSSSCCSH--HH---HTHHHHTTCSEEEESSCCSS----------SCBCCTT---TT
T ss_pred EEEecCChHHccccccCCCEEEECCCchhhH--HH---HHHHHHcCCCEEEEecCCCC----------CCEEEec---cC
Confidence 322 255655 4899999999876542 22 223334455 777666511 1111111 12
Q ss_pred CCCCCcceeEecCCCChHHHHH-HHHHHHHHhCCe
Q 022407 146 PPPLMKLVEVIRGADTSDETFR-ATKALAERFGKT 179 (297)
Q Consensus 146 p~~~~~~vev~~~~~~~~~~~~-~~~~l~~~lG~~ 179 (297)
+-.+.+...++..+++...... .+.++.+..|-.
T Consensus 139 ~~~~~~~~~iIsnpsCtt~~la~~lkpL~~~~gI~ 173 (337)
T 3e5r_O 139 EDKYTSDIDIVSNASCTTNCLAPLAKVIHDNFGII 173 (337)
T ss_dssp GGGCCTTCCEEECCCHHHHHHHHHHHHHHHHHCEE
T ss_pred HHHhCCCCcEEECCChHHHHHHHHHHHHHHhcCcc
Confidence 1111112347777776655544 445566666653
No 321
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=96.85 E-value=0.0036 Score=55.58 Aligned_cols=94 Identities=15% Similarity=0.205 Sum_probs=59.9
Q ss_pred cEEEEECCChhHHHHHHHHHHCC--------CcE-EEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEe
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDG--------LDV-WLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCT 76 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G--------~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~ 76 (297)
-||||||+|.||...+..+.... .+| .++|+++++++++.++ .|. -.+.
T Consensus 7 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~----------~g~------------~~~~ 64 (390)
T 4h3v_A 7 LGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGK----------LGW------------STTE 64 (390)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHH----------HTC------------SEEE
T ss_pred CcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHH----------cCC------------Cccc
Confidence 38999999999998887766532 244 4889999887765221 121 1466
Q ss_pred cCccc-c--cCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccH
Q 022407 77 SNLKD-L--HSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISI 125 (297)
Q Consensus 77 ~~~~~-~--~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~ 125 (297)
+|+++ + .+.|+|+.|+|...+.. .+...++. +..+++--.-+.+.
T Consensus 65 ~d~~~ll~~~~iDaV~I~tP~~~H~~-~~~~al~a---GkhVl~EKPla~t~ 112 (390)
T 4h3v_A 65 TDWRTLLERDDVQLVDVCTPGDSHAE-IAIAALEA---GKHVLCEKPLANTV 112 (390)
T ss_dssp SCHHHHTTCTTCSEEEECSCGGGHHH-HHHHHHHT---TCEEEEESSSCSSH
T ss_pred CCHHHHhcCCCCCEEEEeCChHHHHH-HHHHHHHc---CCCceeecCcccch
Confidence 77777 4 35899999999888642 22222332 33466544444444
No 322
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=96.81 E-value=0.019 Score=49.10 Aligned_cols=95 Identities=16% Similarity=0.230 Sum_probs=61.8
Q ss_pred CcEEEEECCChhHHHHHHHHHH-CCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEe-cCcccc
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVM-DGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCT-SNLKDL 82 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~-~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~-~~~~~~ 82 (297)
-++|..||||..|.... .+++ .|.+|+.+|++++.++.+++.+++. |. .++++. .|..++
T Consensus 123 g~rVLDIGcG~G~~ta~-~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~-------gl----------~~v~~v~gDa~~l 184 (298)
T 3fpf_A 123 GERAVFIGGGPLPLTGI-LLSHVYGMRVNVVEIEPDIAELSRKVIEGL-------GV----------DGVNVITGDETVI 184 (298)
T ss_dssp TCEEEEECCCSSCHHHH-HHHHTTCCEEEEEESSHHHHHHHHHHHHHH-------TC----------CSEEEEESCGGGG
T ss_pred cCEEEEECCCccHHHHH-HHHHccCCEEEEEECCHHHHHHHHHHHHhc-------CC----------CCeEEEECchhhC
Confidence 46999999998664322 2344 5889999999999998886654321 21 223332 222222
Q ss_pred --cCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeec
Q 022407 83 --HSADIIVEAIVESEDVKKKLFSELDKITKASAILASN 119 (297)
Q Consensus 83 --~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ 119 (297)
...|+|+.+.. ..-+..+++++.+.++++..++..
T Consensus 185 ~d~~FDvV~~~a~--~~d~~~~l~el~r~LkPGG~Lvv~ 221 (298)
T 3fpf_A 185 DGLEFDVLMVAAL--AEPKRRVFRNIHRYVDTETRIIYR 221 (298)
T ss_dssp GGCCCSEEEECTT--CSCHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCCCcCEEEECCC--ccCHHHHHHHHHHHcCCCcEEEEE
Confidence 46899997653 222668899999988887765533
No 323
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=96.81 E-value=0.0017 Score=56.93 Aligned_cols=37 Identities=24% Similarity=0.374 Sum_probs=28.5
Q ss_pred cEEEEECCChhHHHHHHHHHHC-CCcEE-EEeCCHHHHH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMD-GLDVW-LVDTDPDALV 42 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~-G~~V~-~~d~~~~~~~ 42 (297)
.||+|+|+|.+|..++..|.++ +++|. +.|++++...
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~~~~~~ 40 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEA 40 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSSSEEEEEEEESSCSHHH
T ss_pred eEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCChhHHH
Confidence 5899999999999999998874 55654 5677755443
No 324
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=96.76 E-value=0.00085 Score=59.35 Aligned_cols=32 Identities=28% Similarity=0.296 Sum_probs=30.5
Q ss_pred cEEEEECCChhHHHHHHHHHHCCC-cEEEEeCC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGL-DVWLVDTD 37 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~-~V~~~d~~ 37 (297)
.||.|+|+|.+|..+|..+...|. +|+++|++
T Consensus 193 ~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 193 VKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 689999999999999999999998 89999998
No 325
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=96.75 E-value=0.0061 Score=53.56 Aligned_cols=71 Identities=20% Similarity=0.288 Sum_probs=46.0
Q ss_pred cEEEEECCChhHHH-HHHHHHHC-CCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-
Q 022407 6 KVMGVVGSGQMGSG-IAQLGVMD-GLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD- 81 (297)
Q Consensus 6 ~~V~iiG~G~mG~~-iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~- 81 (297)
.||+|||+|.||.. .+..+... +++|+ ++|++ +.++..+. +-.. .+...+++++
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~--~~~~~a~~-------~~~~-------------~~~~~~~~~~l 60 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH--VNEKAAAP-------FKEK-------------GVNFTADLNEL 60 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT--CCHHHHHH-------HHTT-------------TCEEESCTHHH
T ss_pred eEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC--HHHHHHHh-------hCCC-------------CCeEECCHHHH
Confidence 58999999999984 55555544 67765 88888 22222100 0001 1356778877
Q ss_pred cc--CCcEEEEecccCHHH
Q 022407 82 LH--SADIIVEAIVESEDV 98 (297)
Q Consensus 82 ~~--~aD~Vi~~v~e~~~~ 98 (297)
++ +.|+|++|+|...+.
T Consensus 61 l~~~~~D~V~i~tp~~~h~ 79 (349)
T 3i23_A 61 LTDPEIELITICTPAHTHY 79 (349)
T ss_dssp HSCTTCCEEEECSCGGGHH
T ss_pred hcCCCCCEEEEeCCcHHHH
Confidence 44 489999999987763
No 326
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=96.75 E-value=0.022 Score=49.22 Aligned_cols=39 Identities=18% Similarity=0.210 Sum_probs=35.1
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
++|.|.|+ |.+|+.++..|++.|++|++.+|+.+..+.+
T Consensus 12 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~ 51 (342)
T 1y1p_A 12 SLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANL 51 (342)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHH
Confidence 68999998 9999999999999999999999998765544
No 327
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=96.72 E-value=0.0024 Score=54.55 Aligned_cols=70 Identities=24% Similarity=0.313 Sum_probs=51.7
Q ss_pred cEEEEECCCh-hHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-cc
Q 022407 6 KVMGVVGSGQ-MGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LH 83 (297)
Q Consensus 6 ~~V~iiG~G~-mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~ 83 (297)
+++.|||.|. +|.++|..|...|..|+++++.. .++++ ++
T Consensus 166 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t--------------------------------------~~L~~~~~ 207 (301)
T 1a4i_A 166 RHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT--------------------------------------AHLDEEVN 207 (301)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------------------------------SSHHHHHT
T ss_pred CEEEEECCCchHHHHHHHHHHhCCCeEEEEECCc--------------------------------------ccHHHHhc
Confidence 6899999995 79999999999999999997442 23333 67
Q ss_pred CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecC
Q 022407 84 SADIIVEAIVESEDVKKKLFSELDKITKASAILASNT 120 (297)
Q Consensus 84 ~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~t 120 (297)
.||+||.+++...-++. ++++++++++.-.
T Consensus 208 ~ADIVI~Avg~p~~I~~-------~~vk~GavVIDVg 237 (301)
T 1a4i_A 208 KGDILVVATGQPEMVKG-------EWIKPGAIVIDCG 237 (301)
T ss_dssp TCSEEEECCCCTTCBCG-------GGSCTTCEEEECC
T ss_pred cCCEEEECCCCcccCCH-------HHcCCCcEEEEcc
Confidence 89999999975432222 2356777776443
No 328
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=96.70 E-value=0.0022 Score=54.93 Aligned_cols=92 Identities=16% Similarity=0.098 Sum_probs=57.5
Q ss_pred CCcEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-
Q 022407 4 KMKVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD- 81 (297)
Q Consensus 4 ~~~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~- 81 (297)
+..||+|+|+ |.||..++..+.+.|++ .++..++.+. |. . ...+.+..++++
T Consensus 6 ~~~rVaViG~sG~~G~~~~~~l~~~g~~-~V~~V~p~~~-----------------g~-------~-~~G~~vy~sl~el 59 (288)
T 2nu8_A 6 KNTKVICQGFTGSQGTFHSEQAIAYGTK-MVGGVTPGKG-----------------GT-------T-HLGLPVFNTVREA 59 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECTTCT-----------------TC-------E-ETTEEEESSHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEeCCCcc-----------------cc-------e-eCCeeccCCHHHH
Confidence 3468999999 99999999999888998 4455555311 00 0 112456777777
Q ss_pred cc--CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccH
Q 022407 82 LH--SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISI 125 (297)
Q Consensus 82 ~~--~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~ 125 (297)
.. ++|+++.++|.... .+++.+..+. .-..++. -|.+++.
T Consensus 60 ~~~~~~D~viI~tP~~~~--~~~~~ea~~~-Gi~~iVi-~t~G~~~ 101 (288)
T 2nu8_A 60 VAATGATASVIYVPAPFC--KDSILEAIDA-GIKLIIT-ITEGIPT 101 (288)
T ss_dssp HHHHCCCEEEECCCGGGH--HHHHHHHHHT-TCSEEEE-CCCCCCH
T ss_pred hhcCCCCEEEEecCHHHH--HHHHHHHHHC-CCCEEEE-ECCCCCH
Confidence 44 79999999997653 3344443332 1233333 3445555
No 329
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.70 E-value=0.0014 Score=58.02 Aligned_cols=37 Identities=24% Similarity=0.318 Sum_probs=32.4
Q ss_pred CCCCCcEEEEECCChhHHHHHHHHHHCCCcEEEEeCC
Q 022407 1 MEEKMKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTD 37 (297)
Q Consensus 1 M~~~~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~ 37 (297)
|++....|.|||+|..|...|..|+++|++|+++|++
T Consensus 1 Mm~~~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~ 37 (382)
T 1y56_B 1 MLPEKSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKR 37 (382)
T ss_dssp -CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCCCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 5444457999999999999999999999999999986
No 330
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=96.67 E-value=0.0056 Score=51.03 Aligned_cols=74 Identities=12% Similarity=0.100 Sum_probs=49.1
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-cc
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LH 83 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~ 83 (297)
+||+++|+|.||+.++.. . ++++. +|+ ++ . +.+ .+..++|+++ ++
T Consensus 13 ~rV~i~G~GaIG~~v~~~--~-~leLv~v~~---~k---~--------------gel----------gv~a~~d~d~lla 59 (253)
T 1j5p_A 13 MTVLIIGMGNIGKKLVEL--G-NFEKIYAYD---RI---S--------------KDI----------PGVVRLDEFQVPS 59 (253)
T ss_dssp CEEEEECCSHHHHHHHHH--S-CCSEEEEEC---SS---C--------------CCC----------SSSEECSSCCCCT
T ss_pred ceEEEECcCHHHHHHHhc--C-CcEEEEEEe---cc---c--------------ccc----------CceeeCCHHHHhh
Confidence 799999999999999988 4 88864 676 21 1 110 2346777777 67
Q ss_pred CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEe
Q 022407 84 SADIIVEAIVESEDVKKKLFSELDKITKASAILA 117 (297)
Q Consensus 84 ~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~ 117 (297)
++|+|++|.+.. .+-..+.+.+..+.=++
T Consensus 60 ~pD~VVe~A~~~-----av~e~~~~iL~aG~dvv 88 (253)
T 1j5p_A 60 DVSTVVECASPE-----AVKEYSLQILKNPVNYI 88 (253)
T ss_dssp TCCEEEECSCHH-----HHHHHHHHHTTSSSEEE
T ss_pred CCCEEEECCCHH-----HHHHHHHHHHHCCCCEE
Confidence 999999998522 22223556666655333
No 331
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=96.67 E-value=0.0035 Score=53.86 Aligned_cols=35 Identities=17% Similarity=0.196 Sum_probs=31.4
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDA 40 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~ 40 (297)
++|.|.|+ |.+|+.++..|++.|++|++.+|++..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 38 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGN 38 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCc
Confidence 68999996 999999999999999999999998443
No 332
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=96.65 E-value=0.00095 Score=58.20 Aligned_cols=100 Identities=19% Similarity=0.270 Sum_probs=53.7
Q ss_pred cEEEEECCChhHHHHHHHHHHC---------CCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEE
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMD---------GLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRC 75 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~---------G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~ 75 (297)
.||+|||+|.||+.++..+.+. +.+|. ++|++++..+.. ...+.+......+. +
T Consensus 3 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~i--d~~~~~~~~~~~~~--------------~ 66 (327)
T 3do5_A 3 IKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDF--SLVEALRMKRETGM--------------L 66 (327)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSC--CHHHHHHHHHHHSS--------------C
T ss_pred EEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhcccc--CHHHHHhhhccCcc--------------c
Confidence 5899999999999999998765 55555 668775432210 00000110011111 2
Q ss_pred e--cCccc-c--cCCcEEEEecccCHHHHHHHHHHHHhhccCC-eEEeecCCC
Q 022407 76 T--SNLKD-L--HSADIIVEAIVESEDVKKKLFSELDKITKAS-AILASNTSS 122 (297)
Q Consensus 76 ~--~~~~~-~--~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~-~ii~s~ts~ 122 (297)
+ .|+++ + .+.|+|++|.|...+-.. .+..+...+..+ .+++.|...
T Consensus 67 ~~~~d~~~ll~~~~iDvVv~~tp~~~h~~~-a~~~~~~aL~aGkhVv~~NKkp 118 (327)
T 3do5_A 67 RDDAKAIEVVRSADYDVLIEASVTRVDGGE-GVNYIREALKRGKHVVTSNKGP 118 (327)
T ss_dssp SBCCCHHHHHHHSCCSEEEECCCCC----C-HHHHHHHHHTTTCEEEECCSHH
T ss_pred cCCCCHHHHhcCCCCCEEEECCCCcccchh-HHHHHHHHHHCCCeEEecCchh
Confidence 2 25555 3 468999999998764211 222233334444 455555543
No 333
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=96.63 E-value=0.0018 Score=57.90 Aligned_cols=39 Identities=26% Similarity=0.308 Sum_probs=33.9
Q ss_pred CCCCCcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHH
Q 022407 1 MEEKMKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPD 39 (297)
Q Consensus 1 M~~~~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~ 39 (297)
|.....+|.|||+|..|...|..|+++|++|+++|+++.
T Consensus 1 M~~~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 39 (397)
T 2vou_A 1 MSPTTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQ 39 (397)
T ss_dssp -CCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 554456899999999999999999999999999998754
No 334
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=96.63 E-value=0.0073 Score=53.06 Aligned_cols=35 Identities=29% Similarity=0.458 Sum_probs=32.8
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDA 40 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~ 40 (297)
++|+|+|+|.+|...|..+...|.+|.++|+++++
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~ 210 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTER 210 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccH
Confidence 68999999999999999999999999999999764
No 335
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=96.61 E-value=0.0018 Score=47.91 Aligned_cols=82 Identities=10% Similarity=0.055 Sum_probs=57.7
Q ss_pred CCcEEEEECC----ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCc
Q 022407 4 KMKVMGVVGS----GQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNL 79 (297)
Q Consensus 4 ~~~~V~iiG~----G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 79 (297)
..++|+|||+ +..|..+..+|.+.||+|+.++...+.+ .-..+..++
T Consensus 3 ~p~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~i-----------------------------~G~~~y~sl 53 (122)
T 3ff4_A 3 AMKKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGEV-----------------------------LGKTIINER 53 (122)
T ss_dssp CCCCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSEE-----------------------------TTEECBCSC
T ss_pred CCCEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCcC-----------------------------CCeeccCCh
Confidence 3478999998 5689999999999999999988754321 113566778
Q ss_pred ccccCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEe
Q 022407 80 KDLHSADIIVEAIVESEDVKKKLFSELDKITKASAILA 117 (297)
Q Consensus 80 ~~~~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~ 117 (297)
+++.+.|+++.++|.+. ...+++++.+.-. ..++.
T Consensus 54 ~dlp~vDlavi~~p~~~--v~~~v~e~~~~g~-k~v~~ 88 (122)
T 3ff4_A 54 PVIEGVDTVTLYINPQN--QLSEYNYILSLKP-KRVIF 88 (122)
T ss_dssp CCCTTCCEEEECSCHHH--HGGGHHHHHHHCC-SEEEE
T ss_pred HHCCCCCEEEEEeCHHH--HHHHHHHHHhcCC-CEEEE
Confidence 88655999999997533 4455666554422 34554
No 336
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=96.58 E-value=0.003 Score=59.70 Aligned_cols=33 Identities=30% Similarity=0.473 Sum_probs=30.4
Q ss_pred cEEEEECCChhHHHHHHHHHHCCC-cEEEEeCCH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGL-DVWLVDTDP 38 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~-~V~~~d~~~ 38 (297)
.+|.|||+|.+|+.++..|+.+|. +++++|.+.
T Consensus 18 s~VlVVGaGGLGsevak~La~aGVG~ItlvD~D~ 51 (640)
T 1y8q_B 18 GRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDT 51 (640)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEEECCB
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCeEEEecCCE
Confidence 589999999999999999999998 899999764
No 337
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=96.57 E-value=0.0067 Score=53.13 Aligned_cols=82 Identities=15% Similarity=0.261 Sum_probs=47.6
Q ss_pred cEEEEECCChhHHHHHHHHHHC-CCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCC--Chhhhcc-c-CCceEEecCc
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMD-GLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQL--SQAMGTD-A-PRRLRCTSNL 79 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~-~-~~~i~~~~~~ 79 (297)
.||+|+|+|.||..++..+.++ +.+|. +.|++++....... ..|.. ....... . ...+...++.
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~----------~~g~~~~~~~~~~~~~~~~~v~v~~~~ 71 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAH----------RRGIRIYVPQQSIKKFEESGIPVAGTV 71 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHH----------HTTCCEECCGGGHHHHHTTTCCCCCCH
T ss_pred eEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHH----------hcCcceecCcCHHHHhcccccccccCH
Confidence 4899999999999999998875 44654 66877655443311 11210 0000000 0 0112233344
Q ss_pred cc-ccCCcEEEEecccCHH
Q 022407 80 KD-LHSADIIVEAIVESED 97 (297)
Q Consensus 80 ~~-~~~aD~Vi~~v~e~~~ 97 (297)
++ ..++|+||+|.|....
T Consensus 72 e~l~~~vDvV~~aTp~~~s 90 (340)
T 1b7g_O 72 EDLIKTSDIVVDTTPNGVG 90 (340)
T ss_dssp HHHHHHCSEEEECCSTTHH
T ss_pred hHhhcCCCEEEECCCCchh
Confidence 44 4579999999987653
No 338
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=96.57 E-value=0.0082 Score=52.44 Aligned_cols=99 Identities=15% Similarity=0.201 Sum_probs=57.1
Q ss_pred CCcEEEEECC-ChhHHHHHHHHHH-CCCcEEEEeCCH---HHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEec-
Q 022407 4 KMKVMGVVGS-GQMGSGIAQLGVM-DGLDVWLVDTDP---DALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTS- 77 (297)
Q Consensus 4 ~~~~V~iiG~-G~mG~~iA~~l~~-~G~~V~~~d~~~---~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~- 77 (297)
.++||+|+|+ |.+|..+...|.. ..+++..+..+. ..=+.. ......+ .|. ..+.+.+
T Consensus 3 ~M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~----~~~~p~~--~~~----------~~~~v~~~ 66 (337)
T 3dr3_A 3 AMLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLI----SDLHPQL--KGI----------VELPLQPM 66 (337)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBH----HHHCGGG--TTT----------CCCBEEEE
T ss_pred CceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCch----HHhCccc--cCc----------cceeEecc
Confidence 3579999996 9999999999988 456777664433 110001 0000000 010 0123332
Q ss_pred -Ccccc-cCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCc
Q 022407 78 -NLKDL-HSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSI 123 (297)
Q Consensus 78 -~~~~~-~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~ 123 (297)
+.+++ +++|+||+|+|.... .++..+ +...++.++.+++..
T Consensus 67 ~~~~~~~~~~Dvvf~a~p~~~s--~~~~~~---~~~~g~~vIDlSa~f 109 (337)
T 3dr3_A 67 SDISEFSPGVDVVFLATAHEVS--HDLAPQ---FLEAGCVVFDLSGAF 109 (337)
T ss_dssp SSGGGTCTTCSEEEECSCHHHH--HHHHHH---HHHTTCEEEECSSTT
T ss_pred CCHHHHhcCCCEEEECCChHHH--HHHHHH---HHHCCCEEEEcCCcc
Confidence 44555 899999999986442 233333 334567777777765
No 339
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=96.55 E-value=0.0022 Score=54.36 Aligned_cols=69 Identities=19% Similarity=0.253 Sum_probs=50.8
Q ss_pred cEEEEECCCh-hHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-cc
Q 022407 6 KVMGVVGSGQ-MGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LH 83 (297)
Q Consensus 6 ~~V~iiG~G~-mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~ 83 (297)
+++.|||.|. +|.++|..|+..|..|++.++... ++++ ++
T Consensus 161 k~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~--------------------------------------~L~~~~~ 202 (285)
T 3p2o_A 161 KDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTK--------------------------------------DLSLYTR 202 (285)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS--------------------------------------CHHHHHT
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCch--------------------------------------hHHHHhh
Confidence 6899999876 699999999999999999986432 2333 67
Q ss_pred CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeec
Q 022407 84 SADIIVEAIVESEDVKKKLFSELDKITKASAILASN 119 (297)
Q Consensus 84 ~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ 119 (297)
.||+||.+++...-++. ++++++++++..
T Consensus 203 ~ADIVI~Avg~p~~I~~-------~~vk~GavVIDV 231 (285)
T 3p2o_A 203 QADLIIVAAGCVNLLRS-------DMVKEGVIVVDV 231 (285)
T ss_dssp TCSEEEECSSCTTCBCG-------GGSCTTEEEEEC
T ss_pred cCCEEEECCCCCCcCCH-------HHcCCCeEEEEe
Confidence 89999999974322222 345777777643
No 340
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=96.53 E-value=0.0045 Score=55.63 Aligned_cols=42 Identities=17% Similarity=0.179 Sum_probs=36.8
Q ss_pred cEEEEECCChhHHHHHHHHHHCCC---cEEEEeCCHHHHHHHHHH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGL---DVWLVDTDPDALVRATKS 47 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~---~V~~~d~~~~~~~~~~~~ 47 (297)
+||+|+|+|.+|+.++..|++.|. +|+++|++.++++++.+.
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~ 46 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQS 46 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHH
Confidence 589999999999999999999983 899999999987766443
No 341
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=96.51 E-value=0.0013 Score=56.82 Aligned_cols=92 Identities=17% Similarity=0.206 Sum_probs=57.3
Q ss_pred cEEEEECCChh-HHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceE-E--e--cCc
Q 022407 6 KVMGVVGSGQM-GSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLR-C--T--SNL 79 (297)
Q Consensus 6 ~~V~iiG~G~m-G~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~-~--~--~~~ 79 (297)
+++.|||+|.| |..+|..|+..|..|+++||+..++.. .... ........+ + + .++
T Consensus 178 k~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~--------------ra~~----la~~~~~~t~~~~t~~~~L 239 (320)
T 1edz_A 178 KKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFT--------------RGES----LKLNKHHVEDLGEYSEDLL 239 (320)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEE--------------SCCC----SSCCCCEEEEEEECCHHHH
T ss_pred CEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHh--------------HHHH----HhhhcccccccccccHhHH
Confidence 68999999976 999999999999999999998442211 0000 000000011 0 2 445
Q ss_pred cc-ccCCcEEEEecccCHH-HHHHHHHHHHhhccCCeEEeecCCC
Q 022407 80 KD-LHSADIIVEAIVESED-VKKKLFSELDKITKASAILASNTSS 122 (297)
Q Consensus 80 ~~-~~~aD~Vi~~v~e~~~-~k~~~~~~l~~~~~~~~ii~s~ts~ 122 (297)
++ ++.||+||.+++...- ++. ++++++++++.-.+.
T Consensus 240 ~e~l~~ADIVIsAtg~p~~vI~~-------e~vk~GavVIDVgi~ 277 (320)
T 1edz_A 240 KKCSLDSDVVITGVPSENYKFPT-------EYIKEGAVCINFACT 277 (320)
T ss_dssp HHHHHHCSEEEECCCCTTCCBCT-------TTSCTTEEEEECSSS
T ss_pred HHHhccCCEEEECCCCCcceeCH-------HHcCCCeEEEEcCCC
Confidence 55 8899999999975322 222 234677777655443
No 342
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=96.47 E-value=0.0026 Score=53.90 Aligned_cols=69 Identities=22% Similarity=0.256 Sum_probs=50.3
Q ss_pred cEEEEECCCh-hHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-cc
Q 022407 6 KVMGVVGSGQ-MGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LH 83 (297)
Q Consensus 6 ~~V~iiG~G~-mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~ 83 (297)
+++.|||.|. +|.++|..|...|..|++.++... ++++ ++
T Consensus 162 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~--------------------------------------~L~~~~~ 203 (285)
T 3l07_A 162 AYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTT--------------------------------------DLKSHTT 203 (285)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS--------------------------------------SHHHHHT
T ss_pred CEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch--------------------------------------hHHHhcc
Confidence 6899999876 799999999999999999975422 2333 67
Q ss_pred CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeec
Q 022407 84 SADIIVEAIVESEDVKKKLFSELDKITKASAILASN 119 (297)
Q Consensus 84 ~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ 119 (297)
.||+||.+++...-++. ++++++++++..
T Consensus 204 ~ADIVI~Avg~p~~I~~-------~~vk~GavVIDv 232 (285)
T 3l07_A 204 KADILIVAVGKPNFITA-------DMVKEGAVVIDV 232 (285)
T ss_dssp TCSEEEECCCCTTCBCG-------GGSCTTCEEEEC
T ss_pred cCCEEEECCCCCCCCCH-------HHcCCCcEEEEe
Confidence 89999999974322222 345777776643
No 343
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=96.45 E-value=0.0024 Score=54.13 Aligned_cols=32 Identities=22% Similarity=0.179 Sum_probs=28.7
Q ss_pred cEEEEECCCh-hHHHHHHHHHHCCCcEEEEeCC
Q 022407 6 KVMGVVGSGQ-MGSGIAQLGVMDGLDVWLVDTD 37 (297)
Q Consensus 6 ~~V~iiG~G~-mG~~iA~~l~~~G~~V~~~d~~ 37 (297)
+++.|||.|. +|.++|..|+..|..|++.++.
T Consensus 162 k~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~ 194 (286)
T 4a5o_A 162 MDAVVVGASNIVGRPMALELLLGGCTVTVTHRF 194 (286)
T ss_dssp CEEEEECTTSTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence 6899999865 8999999999999999999753
No 344
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=96.45 E-value=0.0019 Score=55.16 Aligned_cols=34 Identities=32% Similarity=0.410 Sum_probs=31.4
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPD 39 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~ 39 (297)
|||.|.|+ |.+|+.++..|.+.||+|++..|+++
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 58999998 99999999999999999999998764
No 345
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=96.44 E-value=0.0019 Score=58.44 Aligned_cols=33 Identities=24% Similarity=0.370 Sum_probs=31.2
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDP 38 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~ 38 (297)
++|.|||+|..|...|..|+++|++|+++|+.+
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 589999999999999999999999999999865
No 346
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=96.44 E-value=0.0016 Score=55.29 Aligned_cols=68 Identities=18% Similarity=0.248 Sum_probs=50.0
Q ss_pred cEEEEECCCh-hHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-cc
Q 022407 6 KVMGVVGSGQ-MGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LH 83 (297)
Q Consensus 6 ~~V~iiG~G~-mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~ 83 (297)
+++.|||.|. +|.++|..|...|..|+++++... ++.+ ++
T Consensus 160 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~--------------------------------------~L~~~~~ 201 (288)
T 1b0a_A 160 LNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK--------------------------------------NLRHHVE 201 (288)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS--------------------------------------CHHHHHH
T ss_pred CEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCch--------------------------------------hHHHHhc
Confidence 6899999996 699999999999999999975432 3333 56
Q ss_pred CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEee
Q 022407 84 SADIIVEAIVESEDVKKKLFSELDKITKASAILAS 118 (297)
Q Consensus 84 ~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s 118 (297)
.||+||.+++...-++. ++++++++++.
T Consensus 202 ~ADIVI~Avg~p~lI~~-------~~vk~GavVID 229 (288)
T 1b0a_A 202 NADLLIVAVGKPGFIPG-------DWIKEGAIVID 229 (288)
T ss_dssp HCSEEEECSCCTTCBCT-------TTSCTTCEEEE
T ss_pred cCCEEEECCCCcCcCCH-------HHcCCCcEEEE
Confidence 79999999974432222 23467776663
No 347
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=96.41 E-value=0.001 Score=54.21 Aligned_cols=78 Identities=19% Similarity=0.282 Sum_probs=49.1
Q ss_pred CcEEEEECCChhHHHHHHH--HHHCCCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc
Q 022407 5 MKVMGVVGSGQMGSGIAQL--GVMDGLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD 81 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~--l~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 81 (297)
..+|+|||+|.+|..++.. +.. |+++. ++|.++++.... ..| -.+...+++++
T Consensus 80 ~~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~dp~k~g~~------------i~g-----------v~V~~~~dl~e 135 (211)
T 2dt5_A 80 KWGLCIVGMGRLGSALADYPGFGE-SFELRGFFDVDPEKVGRP------------VRG-----------GVIEHVDLLPQ 135 (211)
T ss_dssp CEEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEESCTTTTTCE------------ETT-----------EEEEEGGGHHH
T ss_pred CCEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeCCHHHHhhh------------hcC-----------CeeecHHhHHH
Confidence 3689999999999999985 223 77654 789988743211 000 01223455555
Q ss_pred -cc-CCcEEEEecccCHHHHHHHHHHHHh
Q 022407 82 -LH-SADIIVEAIVESEDVKKKLFSELDK 108 (297)
Q Consensus 82 -~~-~aD~Vi~~v~e~~~~k~~~~~~l~~ 108 (297)
++ +.|.|+.|+|... .+++...+.+
T Consensus 136 ll~~~ID~ViIA~Ps~~--~~ei~~~l~~ 162 (211)
T 2dt5_A 136 RVPGRIEIALLTVPREA--AQKAADLLVA 162 (211)
T ss_dssp HSTTTCCEEEECSCHHH--HHHHHHHHHH
T ss_pred HHHcCCCEEEEeCCchh--HHHHHHHHHH
Confidence 43 6899999998654 3355554443
No 348
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=96.40 E-value=0.0024 Score=57.30 Aligned_cols=38 Identities=26% Similarity=0.363 Sum_probs=31.9
Q ss_pred CCCCCcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCH
Q 022407 1 MEEKMKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDP 38 (297)
Q Consensus 1 M~~~~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~ 38 (297)
|......|.|||+|..|...|..|++.|++|+++|+++
T Consensus 1 M~~~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~ 38 (421)
T 3nix_A 1 MQREKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQK 38 (421)
T ss_dssp ---CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CCCccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 54433589999999999999999999999999999864
No 349
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=96.40 E-value=0.021 Score=51.09 Aligned_cols=39 Identities=18% Similarity=0.192 Sum_probs=34.6
Q ss_pred cEEEEECCChhHHHHHHHHHHCCC-cEEEEeCCHHHHHHH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGL-DVWLVDTDPDALVRA 44 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~ 44 (297)
++|.|+|+|.+|...++.+...|. +|+..|+++++++.+
T Consensus 215 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~ 254 (404)
T 3ip1_A 215 DNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLA 254 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence 689999999999988887778999 899999999887765
No 350
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=96.37 E-value=0.0062 Score=49.96 Aligned_cols=44 Identities=25% Similarity=0.270 Sum_probs=35.2
Q ss_pred CCCCCcEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 1 MEEKMKVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 1 M~~~~~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
|..+.++|.|.|+ |.+|..++..|++.|++|++.++++++++..
T Consensus 1 M~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~ 45 (234)
T 2ehd_A 1 MEGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQAL 45 (234)
T ss_dssp ---CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 6554467888876 8999999999999999999999998776554
No 351
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=96.37 E-value=0.0032 Score=53.29 Aligned_cols=37 Identities=16% Similarity=0.218 Sum_probs=32.8
Q ss_pred cEEEEECC-ChhHHHHHHHHHHC--CCcEEEEeCCHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMD--GLDVWLVDTDPDALV 42 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~--G~~V~~~d~~~~~~~ 42 (297)
++|.|.|+ |.+|+.++..|++. |++|++.+|++++.+
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~ 40 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAS 40 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTH
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHh
Confidence 46899998 99999999999998 999999999876544
No 352
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=96.37 E-value=0.0025 Score=56.80 Aligned_cols=35 Identities=23% Similarity=0.140 Sum_probs=32.0
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHH
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPD 39 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~ 39 (297)
..+|.|||+|..|...|..|+++|++|+++|+++.
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~ 40 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARR 40 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 35899999999999999999999999999998653
No 353
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=96.37 E-value=0.0031 Score=58.77 Aligned_cols=38 Identities=24% Similarity=0.340 Sum_probs=33.2
Q ss_pred CCCCCcEEEEECCChhHHHHHHHHHH---CCCcEEEEeCCH
Q 022407 1 MEEKMKVMGVVGSGQMGSGIAQLGVM---DGLDVWLVDTDP 38 (297)
Q Consensus 1 M~~~~~~V~iiG~G~mG~~iA~~l~~---~G~~V~~~d~~~ 38 (297)
|++.+.+|.|||+|..|...|..|++ .|++|+++|+..
T Consensus 1 M~~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 41 (538)
T 2aqj_A 1 MNKPIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAA 41 (538)
T ss_dssp -CCBCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSS
T ss_pred CCCCCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence 64556789999999999999999999 999999999853
No 354
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=96.36 E-value=0.029 Score=51.19 Aligned_cols=40 Identities=18% Similarity=0.309 Sum_probs=35.5
Q ss_pred CCcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 4 KMKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 4 ~~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
..++|.|+|+|.+|..+|..|. .+++|.+++.++++.+.+
T Consensus 234 ~~~~v~I~GgG~ig~~lA~~L~-~~~~v~iIE~d~~r~~~l 273 (461)
T 4g65_A 234 PYRRIMIVGGGNIGASLAKRLE-QTYSVKLIERNLQRAEKL 273 (461)
T ss_dssp CCCEEEEECCSHHHHHHHHHHT-TTSEEEEEESCHHHHHHH
T ss_pred cccEEEEEcchHHHHHHHHHhh-hcCceEEEecCHHHHHHH
Confidence 4679999999999999999875 569999999999988776
No 355
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=96.36 E-value=0.02 Score=50.01 Aligned_cols=39 Identities=23% Similarity=0.366 Sum_probs=28.9
Q ss_pred cEEEEECCChhHHHHHHHHHHC-CCcEE-EEeC--CHHHHHHH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMD-GLDVW-LVDT--DPDALVRA 44 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~-G~~V~-~~d~--~~~~~~~~ 44 (297)
.||+|+|+|.+|+.+++.+..+ +.+|. +.|+ +.+.+..+
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l 46 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYM 46 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHH
T ss_pred eEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHH
Confidence 5899999999999999987764 57766 5564 55554433
No 356
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=96.36 E-value=0.0078 Score=52.48 Aligned_cols=62 Identities=10% Similarity=0.108 Sum_probs=45.7
Q ss_pred cEEEEECCChhHH-HHHHHHHHC-CCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-
Q 022407 6 KVMGVVGSGQMGS-GIAQLGVMD-GLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD- 81 (297)
Q Consensus 6 ~~V~iiG~G~mG~-~iA~~l~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~- 81 (297)
.||+|||+|.||. ..+..+.+. +++|+ ++|+++++ . .+...+|+++
T Consensus 26 ~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~~-----------------~-------------g~~~~~~~~~l 75 (330)
T 4ew6_A 26 INLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGTV-----------------E-------------GVNSYTTIEAM 75 (330)
T ss_dssp EEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCCC-----------------T-------------TSEEESSHHHH
T ss_pred ceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChhh-----------------c-------------CCCccCCHHHH
Confidence 5899999999998 678877765 67754 78888541 0 1345677776
Q ss_pred c---cCCcEEEEecccCHH
Q 022407 82 L---HSADIIVEAIVESED 97 (297)
Q Consensus 82 ~---~~aD~Vi~~v~e~~~ 97 (297)
+ .+.|+|++|+|...+
T Consensus 76 l~~~~~vD~V~i~tp~~~H 94 (330)
T 4ew6_A 76 LDAEPSIDAVSLCMPPQYR 94 (330)
T ss_dssp HHHCTTCCEEEECSCHHHH
T ss_pred HhCCCCCCEEEEeCCcHHH
Confidence 4 358999999996654
No 357
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=96.35 E-value=0.0058 Score=57.23 Aligned_cols=33 Identities=18% Similarity=0.361 Sum_probs=30.7
Q ss_pred cEEEEECCChhHHHHHHHHHHCCC-cEEEEeCCH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGL-DVWLVDTDP 38 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~-~V~~~d~~~ 38 (297)
.+|.|||+|.+|+.+|..|+.+|. +++++|.+.
T Consensus 327 arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~ 360 (615)
T 4gsl_A 327 TKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 360 (615)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 589999999999999999999998 799999865
No 358
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=96.35 E-value=0.0023 Score=58.84 Aligned_cols=34 Identities=29% Similarity=0.362 Sum_probs=31.0
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCH
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDP 38 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~ 38 (297)
|++|.|||+|.-|..-|..|+++|++|++++.+.
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~ 34 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRD 34 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEccCC
Confidence 3689999999999999999999999999999875
No 359
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=96.34 E-value=0.0014 Score=53.23 Aligned_cols=79 Identities=16% Similarity=0.255 Sum_probs=49.8
Q ss_pred CcEEEEECCChhHHHHHHH--HHHCCCcEE-EEeCCHH-HHHH-HHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCc
Q 022407 5 MKVMGVVGSGQMGSGIAQL--GVMDGLDVW-LVDTDPD-ALVR-ATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNL 79 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~--l~~~G~~V~-~~d~~~~-~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 79 (297)
..+|+|+|+|.+|..++.. +...|+++. ++|.+++ +... . . .| -.+...+++
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~-----------i-~G-----------vpV~~~~dL 140 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTT-----------E-DG-----------IPVYGISTI 140 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBC-----------T-TC-----------CBEEEGGGH
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchhccCcee-----------E-CC-----------eEEeCHHHH
Confidence 4689999999999999987 345677755 7899876 4311 0 0 01 012223444
Q ss_pred cc-cc--CCcEEEEecccCHHHHHHHHHHHHh
Q 022407 80 KD-LH--SADIIVEAIVESEDVKKKLFSELDK 108 (297)
Q Consensus 80 ~~-~~--~aD~Vi~~v~e~~~~k~~~~~~l~~ 108 (297)
++ ++ +.|.+|.|+|... .+++...+.+
T Consensus 141 ~~~v~~~~Id~vIIAvPs~~--aq~v~d~lv~ 170 (212)
T 3keo_A 141 NDHLIDSDIETAILTVPSTE--AQEVADILVK 170 (212)
T ss_dssp HHHC-CCSCCEEEECSCGGG--HHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEecCchh--HHHHHHHHHH
Confidence 44 43 5899999998765 3455555444
No 360
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=96.33 E-value=0.0026 Score=56.18 Aligned_cols=32 Identities=31% Similarity=0.524 Sum_probs=30.0
Q ss_pred EEEECCChhHHHHHHHHHHCCCcEEEEeCCHH
Q 022407 8 MGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPD 39 (297)
Q Consensus 8 V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~ 39 (297)
|.|||+|..|...|..|+++|++|+++|+.++
T Consensus 7 ViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~ 38 (397)
T 3oz2_A 7 VLVVGGGPGGSTAARYAAKYGLKTLMIEKRPE 38 (397)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred EEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 89999999999999999999999999998653
No 361
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=96.32 E-value=0.0032 Score=54.52 Aligned_cols=38 Identities=29% Similarity=0.309 Sum_probs=32.5
Q ss_pred CCCCCcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCH
Q 022407 1 MEEKMKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDP 38 (297)
Q Consensus 1 M~~~~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~ 38 (297)
|+....+|.|||+|.-|...|..|++.|++|+++|+++
T Consensus 1 m~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 38 (335)
T 2zbw_A 1 MAADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLP 38 (335)
T ss_dssp --CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCCCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 54445689999999999999999999999999999864
No 362
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=96.31 E-value=0.0026 Score=55.65 Aligned_cols=35 Identities=20% Similarity=0.088 Sum_probs=31.9
Q ss_pred CcEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHH
Q 022407 5 MKVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPD 39 (297)
Q Consensus 5 ~~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~ 39 (297)
.++|.|.|+ |.+|+.++..|++.|++|++++|+..
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 60 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFST 60 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 479999996 99999999999999999999999654
No 363
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.30 E-value=0.011 Score=51.85 Aligned_cols=67 Identities=24% Similarity=0.322 Sum_probs=50.3
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-ccC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LHS 84 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~~ 84 (297)
++|.|+|+|.+|...++.+...|.+|++.++++++.+.+ .+.|.- .+ + .+.+. .++
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-----------~~lGa~----------~v-~-~~~~~~~~~ 234 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDA-----------LSMGVK----------HF-Y-TDPKQCKEE 234 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHH-----------HHTTCS----------EE-E-SSGGGCCSC
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-----------HhcCCC----------ee-c-CCHHHHhcC
Confidence 689999999999988888888999999999999887765 344431 11 2 33333 237
Q ss_pred CcEEEEecccC
Q 022407 85 ADIIVEAIVES 95 (297)
Q Consensus 85 aD~Vi~~v~e~ 95 (297)
.|+||+++...
T Consensus 235 ~D~vid~~g~~ 245 (348)
T 3two_A 235 LDFIISTIPTH 245 (348)
T ss_dssp EEEEEECCCSC
T ss_pred CCEEEECCCcH
Confidence 99999999765
No 364
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=96.30 E-value=0.0035 Score=58.89 Aligned_cols=37 Identities=16% Similarity=0.344 Sum_probs=34.3
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALV 42 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~ 42 (297)
++|.|+|+|.+|..+|..|.+.|++|+++|.++++.+
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~ 385 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVC 385 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHh
Confidence 6899999999999999999999999999999987643
No 365
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=96.29 E-value=0.0069 Score=53.26 Aligned_cols=41 Identities=24% Similarity=0.396 Sum_probs=34.0
Q ss_pred CCCCCcEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHH
Q 022407 1 MEEKMKVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDAL 41 (297)
Q Consensus 1 M~~~~~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~ 41 (297)
|....++|.|.|+ |.+|+.++..|++.|++|++.+|+++..
T Consensus 1 M~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~ 42 (352)
T 1xgk_A 1 MAQQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGL 42 (352)
T ss_dssp --CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChh
Confidence 5333468999997 9999999999999999999999987654
No 366
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=96.29 E-value=0.028 Score=47.58 Aligned_cols=38 Identities=26% Similarity=0.397 Sum_probs=33.0
Q ss_pred EEEEE-CC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 7 VMGVV-GS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 7 ~V~ii-G~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
||++| |+ +-+|.++|..|++.|.+|.+.|++++.+++.
T Consensus 30 KvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~ 69 (273)
T 4fgs_A 30 KIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAA 69 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 56666 65 7799999999999999999999999887765
No 367
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=96.28 E-value=0.019 Score=49.94 Aligned_cols=149 Identities=17% Similarity=0.236 Sum_probs=76.9
Q ss_pred EEEEECCChhHHHHHHHHHHCCCcEEEE-eC-CHHHHHHHHHHHHHHHHHHHHcCCCChhh-h--cc---cCCceEEec-
Q 022407 7 VMGVVGSGQMGSGIAQLGVMDGLDVWLV-DT-DPDALVRATKSISSSIQKFVSKGQLSQAM-G--TD---APRRLRCTS- 77 (297)
Q Consensus 7 ~V~iiG~G~mG~~iA~~l~~~G~~V~~~-d~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~--~~---~~~~i~~~~- 77 (297)
||+|+|+|.+|+.+.+.|.++.++|..+ |. +.+.+..+ +..-...|.+...- . .. .-..+.+..
T Consensus 2 kVgInG~G~IGr~vlr~l~~~~~evvaind~~~~~~~a~l-------l~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~ 74 (331)
T 2g82_O 2 KVGINGFGRIGRQVFRILHSRGVEVALINDLTDNKTLAHL-------LKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAV 74 (331)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCEEEEECSSCHHHHHHH-------HHCCTTTCSCSSCEEECSSEEEETTEEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCEEEEEecCCCHHHHhHh-------hhccccCCCCCceEEEcCCEEEECCEEEEEEec
Confidence 7999999999999999887777887744 53 44443333 11001234322110 0 00 012344432
Q ss_pred -Ccccc--c--CCcEEEEecccCHHHHHHHHHHHHhhccCCe--EEeecCCCccHHHHhhhcCCCCeEEEeecCCCCCCC
Q 022407 78 -NLKDL--H--SADIIVEAIVESEDVKKKLFSELDKITKASA--ILASNTSSISITRLASATSRPCQVIGMHFMNPPPLM 150 (297)
Q Consensus 78 -~~~~~--~--~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~--ii~s~ts~~~~~~l~~~~~~~~~~~g~h~~~p~~~~ 150 (297)
+++++ + ++|+||+|.+..... +. ...+++.++ +|+++++.- ..| .+ ..-+|+-.+.
T Consensus 75 ~dp~~l~w~~~gvDiV~estG~~~s~--e~---a~~~l~aGakkvVIsaps~d---------~~p--~v-V~gVN~~~~~ 137 (331)
T 2g82_O 75 KDPKEIPWAEAGVGVVIESTGVFTDA--DK---AKAHLEGGAKKVIITAPAKG---------EDI--TI-VMGVNHEAYD 137 (331)
T ss_dssp SSGGGSCTTTTTEEEEEECSSSCCBH--HH---HTHHHHTTCSEEEESSCCBS---------CSE--EC-CTTTTGGGCC
T ss_pred CChhhCcccccCCCEEEECCCchhhH--HH---HHHHHHCCCCEEEECCCCcC---------CCC--EE-eeccCHHHhC
Confidence 45444 3 789999999865532 11 223344455 888777641 001 00 1112222122
Q ss_pred c-ceeEecCCCChHHHHH-HHHHHHHHhCCe
Q 022407 151 K-LVEVIRGADTSDETFR-ATKALAERFGKT 179 (297)
Q Consensus 151 ~-~vev~~~~~~~~~~~~-~~~~l~~~lG~~ 179 (297)
+ .-.++..++++..... .+..+.+..|-.
T Consensus 138 ~~~~~IIsnasCtTn~lap~lk~L~~~fgI~ 168 (331)
T 2g82_O 138 PSRHHIISNASCTTNSLAPVMKVLEEAFGVE 168 (331)
T ss_dssp TTTCCEEECCCHHHHHHHHHHHHHHHHTCEE
T ss_pred cCCCCEEECCChHHHHHHHHHHHHHHhcCcc
Confidence 1 1347777776655444 445556667754
No 368
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=96.27 E-value=0.0034 Score=53.27 Aligned_cols=36 Identities=11% Similarity=0.216 Sum_probs=32.3
Q ss_pred cEEEEECC-ChhHHHHHHHHHHC-CCcEEEEeCCHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMD-GLDVWLVDTDPDAL 41 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~-G~~V~~~d~~~~~~ 41 (297)
|+|.|.|+ |.+|+.++..|++. |++|++.+|++++.
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~ 38 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKV 38 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGS
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHH
Confidence 47999997 99999999999988 99999999998754
No 369
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=96.25 E-value=0.0039 Score=53.44 Aligned_cols=34 Identities=18% Similarity=0.276 Sum_probs=31.3
Q ss_pred CcEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCH
Q 022407 5 MKVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDP 38 (297)
Q Consensus 5 ~~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~ 38 (297)
+++|.|.|+ |.+|+.++..|++.|++|++.+|+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPE 38 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCC
Confidence 468999996 9999999999999999999999983
No 370
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=96.23 E-value=0.0035 Score=54.25 Aligned_cols=33 Identities=27% Similarity=0.376 Sum_probs=30.8
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDP 38 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~ 38 (297)
..|.|||+|..|...|..|+++|++|+++|+++
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCC
Confidence 469999999999999999999999999999874
No 371
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=96.22 E-value=0.028 Score=49.32 Aligned_cols=151 Identities=15% Similarity=0.232 Sum_probs=76.6
Q ss_pred CcEEEEECCChhHHHHHHHHHHC-CCcEEEEeC---CHHHHHHHHHHHHHHHHHHHHcCCCChhh-h-ccc----CCceE
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMD-GLDVWLVDT---DPDALVRATKSISSSIQKFVSKGQLSQAM-G-TDA----PRRLR 74 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~-G~~V~~~d~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~-~~~----~~~i~ 74 (297)
+.||+|+|+|.+|+.+.+.|..+ .++|..+.- +.+.+..+ +..-...|.+...- . ... -..+.
T Consensus 17 ~ikVgI~G~G~iGr~llR~l~~~p~veivaindp~~~~~~~a~l-------l~~ds~hg~~~~~v~~~~~~l~v~g~~i~ 89 (354)
T 3cps_A 17 QGTLGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYL-------LKYDSVHGNFNGTVEVSGKDLCINGKVVK 89 (354)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHH-------HHCCTTTCSCSSCEEECC-CEEETTEEEE
T ss_pred ceEEEEECCCHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhhh-------hcccccCCCCCCcEEEeCCEEEECCeEEE
Confidence 35899999999999999998876 567665542 22222221 00001123332110 0 000 01232
Q ss_pred Ee--cCcccc----cCCcEEEEecccCHHHHHHHHHHHHhhccCCe--EEeecCCCccHHHHhhhcCCCCeEEEeecCCC
Q 022407 75 CT--SNLKDL----HSADIIVEAIVESEDVKKKLFSELDKITKASA--ILASNTSSISITRLASATSRPCQVIGMHFMNP 146 (297)
Q Consensus 75 ~~--~~~~~~----~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~--ii~s~ts~~~~~~l~~~~~~~~~~~g~h~~~p 146 (297)
+. .+++++ .++|+||+|.+..... +....+++.++ +|+++++.- . .|.-+.| +|+
T Consensus 90 v~~~~dp~~i~w~~~~vDvV~eatg~~~s~-----e~a~~~l~~GakkvVId~padd-------~--~p~~V~G---VN~ 152 (354)
T 3cps_A 90 VFQAKDPAEIPWGASGAQIVCESTGVFTTE-----EKASLHLKGGAKKVIISAPPKD-------N--VPMYVMG---VNN 152 (354)
T ss_dssp EECCSCGGGCCHHHHTCCEEEECSSSCCSH-----HHHGGGGTTTCSEEEESSCCSS-------C--CCBCCTT---TTG
T ss_pred EEecCChHHCCcccCCCCEEEECCCchhhH-----HHHHHHHHcCCcEEEEeCCCCC-------C--CCEEEec---cCH
Confidence 32 245544 5799999999865532 22345566666 888776531 0 0111111 121
Q ss_pred CCCCcc-eeEecCCCChHHHHH-HHHHHHHHhCCe
Q 022407 147 PPLMKL-VEVIRGADTSDETFR-ATKALAERFGKT 179 (297)
Q Consensus 147 ~~~~~~-vev~~~~~~~~~~~~-~~~~l~~~lG~~ 179 (297)
-.+.+. ..++..+++...... .+.++.+..|-.
T Consensus 153 ~~~~~~~~~IISNpsCtTn~lap~lkpL~~~~gI~ 187 (354)
T 3cps_A 153 TEYDPSKFNVISNASCTTNCLAPLAKIINDKFGIV 187 (354)
T ss_dssp GGCCTTTCSEEECCCHHHHHHHHHHHHHHHHTCEE
T ss_pred HHhCcCCCcEEECCCcHHHHHHHHHHHHHHhCCee
Confidence 111111 347777776655544 455566666643
No 372
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=96.22 E-value=0.0042 Score=55.43 Aligned_cols=33 Identities=30% Similarity=0.552 Sum_probs=31.2
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDP 38 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~ 38 (297)
.+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 27 ~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~ 59 (398)
T 2xdo_A 27 KNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDN 59 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 589999999999999999999999999999875
No 373
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=96.20 E-value=0.0047 Score=57.81 Aligned_cols=38 Identities=24% Similarity=0.232 Sum_probs=33.4
Q ss_pred CCCCCcEEEEECCChhHHHHHHHHHH---CCCcEEEEeCCH
Q 022407 1 MEEKMKVMGVVGSGQMGSGIAQLGVM---DGLDVWLVDTDP 38 (297)
Q Consensus 1 M~~~~~~V~iiG~G~mG~~iA~~l~~---~G~~V~~~d~~~ 38 (297)
|.+.+.+|.|||+|..|...|..|++ .|++|+++|+.+
T Consensus 21 M~~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 61 (550)
T 2e4g_A 21 MSGKIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPD 61 (550)
T ss_dssp CCSCCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred cCCCCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCC
Confidence 54456789999999999999999999 999999999853
No 374
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=96.17 E-value=0.0049 Score=53.86 Aligned_cols=33 Identities=24% Similarity=0.323 Sum_probs=31.0
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDP 38 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~ 38 (297)
..|.|||+|..|...|..|+++|++|+++|+++
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~ 37 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHEVLVAEAAE 37 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 579999999999999999999999999999874
No 375
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=96.17 E-value=0.0063 Score=48.55 Aligned_cols=35 Identities=26% Similarity=0.394 Sum_probs=32.7
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDA 40 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~ 40 (297)
++|.|+|+ |.+|+.++..|++.|++|++++|++++
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~ 39 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSR 39 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhh
Confidence 68999998 999999999999999999999999764
No 376
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=96.17 E-value=0.0051 Score=53.73 Aligned_cols=73 Identities=19% Similarity=0.117 Sum_probs=48.6
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEE-EEeCCH-HHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-c
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVW-LVDTDP-DALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-L 82 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~-~~d~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~ 82 (297)
.||+|||+|.+|...+..+ ..+.+|+ ++|+++ ++.+++.+.. .+.|. .....+|+++ +
T Consensus 3 ~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~~~~~~~~~~~~~~-------~~~~~-----------~~~~~~~~~~ll 63 (337)
T 3ip3_A 3 LKICVIGSSGHFRYALEGL-DEECSITGIAPGVPEEDLSKLEKAI-------SEMNI-----------KPKKYNNWWEML 63 (337)
T ss_dssp EEEEEECSSSCHHHHHTTC-CTTEEEEEEECSSTTCCCHHHHHHH-------HTTTC-----------CCEECSSHHHHH
T ss_pred eEEEEEccchhHHHHHHhc-CCCcEEEEEecCCchhhHHHHHHHH-------HHcCC-----------CCcccCCHHHHh
Confidence 5899999999988777666 6677766 789887 3444332111 11121 0246678877 4
Q ss_pred c--CCcEEEEecccCHH
Q 022407 83 H--SADIIVEAIVESED 97 (297)
Q Consensus 83 ~--~aD~Vi~~v~e~~~ 97 (297)
+ +.|+|+.|+|...+
T Consensus 64 ~~~~vD~V~I~tp~~~H 80 (337)
T 3ip3_A 64 EKEKPDILVINTVFSLN 80 (337)
T ss_dssp HHHCCSEEEECSSHHHH
T ss_pred cCCCCCEEEEeCCcchH
Confidence 3 58999999997665
No 377
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=96.17 E-value=0.0044 Score=55.41 Aligned_cols=34 Identities=21% Similarity=0.163 Sum_probs=31.8
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPD 39 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~ 39 (297)
.+|.|||+|..|...|..|+++|++|+++|+++.
T Consensus 24 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~ 57 (407)
T 3rp8_A 24 MKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKE 57 (407)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 5799999999999999999999999999998764
No 378
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=96.17 E-value=0.0035 Score=58.61 Aligned_cols=32 Identities=19% Similarity=0.371 Sum_probs=29.9
Q ss_pred cEEEEECCChhHHHHHHHHHHCCC-cEEEEeCC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGL-DVWLVDTD 37 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~-~V~~~d~~ 37 (297)
.+|.|||+|..|+.+|..|+.+|. +++++|.+
T Consensus 328 ~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D 360 (598)
T 3vh1_A 328 TKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 360 (598)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCCEEEEECCS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 589999999999999999999998 79999876
No 379
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=96.16 E-value=0.015 Score=49.62 Aligned_cols=92 Identities=14% Similarity=0.096 Sum_probs=57.7
Q ss_pred CCcEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-
Q 022407 4 KMKVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD- 81 (297)
Q Consensus 4 ~~~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~- 81 (297)
+..||+|+|+ |.||..++..+.+.|++ .++..++... |. ....+.+..++++
T Consensus 6 ~~~~VaVvGasG~~G~~~~~~l~~~g~~-~v~~VnP~~~-----------------g~--------~i~G~~vy~sl~el 59 (288)
T 1oi7_A 6 RETRVLVQGITGREGQFHTKQMLTYGTK-IVAGVTPGKG-----------------GM--------EVLGVPVYDTVKEA 59 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECTTCT-----------------TC--------EETTEEEESSHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHcCCe-EEEEECCCCC-----------------Cc--------eECCEEeeCCHHHH
Confidence 3478999999 99999999999988998 4455555320 00 0122456777776
Q ss_pred cc--CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccH
Q 022407 82 LH--SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISI 125 (297)
Q Consensus 82 ~~--~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~ 125 (297)
.. .+|++|.++|... ..+++.+..+.- -..+++ -|.+++.
T Consensus 60 ~~~~~~Dv~Ii~vp~~~--~~~~~~ea~~~G-i~~vVi-~t~G~~~ 101 (288)
T 1oi7_A 60 VAHHEVDASIIFVPAPA--AADAALEAAHAG-IPLIVL-ITEGIPT 101 (288)
T ss_dssp HHHSCCSEEEECCCHHH--HHHHHHHHHHTT-CSEEEE-CCSCCCH
T ss_pred hhcCCCCEEEEecCHHH--HHHHHHHHHHCC-CCEEEE-ECCCCCH
Confidence 44 7999999998543 334444433321 232333 3456654
No 380
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=96.16 E-value=0.05 Score=45.31 Aligned_cols=39 Identities=28% Similarity=0.325 Sum_probs=34.2
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
++|.|.|+ |-+|..+|..|++.|++|.+.|++.+.++..
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~ 48 (259)
T 4e6p_A 9 KSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQA 48 (259)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 56777776 8999999999999999999999998876654
No 381
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=96.15 E-value=0.0074 Score=54.59 Aligned_cols=32 Identities=22% Similarity=0.478 Sum_probs=29.6
Q ss_pred cEEEEECCChhHHHHHHHHHHCCC-cEEEEeCC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGL-DVWLVDTD 37 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~-~V~~~d~~ 37 (297)
.+|.|||+|..|+.++..|+.+|. +++++|.+
T Consensus 41 ~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D 73 (434)
T 1tt5_B 41 CKVLVIGAGGLGCELLKNLALSGFRQIHVIDMD 73 (434)
T ss_dssp CCEEEECSSTHHHHHHHHHHHTTCCCEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 589999999999999999999998 79999864
No 382
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=96.15 E-value=0.0022 Score=56.59 Aligned_cols=37 Identities=22% Similarity=0.344 Sum_probs=33.0
Q ss_pred CcEEEEECC-ChhHHHHHHHHHHC-CCcEEEEeCCHHHH
Q 022407 5 MKVMGVVGS-GQMGSGIAQLGVMD-GLDVWLVDTDPDAL 41 (297)
Q Consensus 5 ~~~V~iiG~-G~mG~~iA~~l~~~-G~~V~~~d~~~~~~ 41 (297)
+++|.|.|+ |.+|+.++..|++. |++|++++|+++..
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~ 62 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRL 62 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTT
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhh
Confidence 478999996 99999999999988 99999999987654
No 383
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=96.15 E-value=0.0055 Score=48.05 Aligned_cols=33 Identities=30% Similarity=0.308 Sum_probs=30.9
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDP 38 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~ 38 (297)
.+|.|||+|..|..+|..|++.|.+|+++++++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 479999999999999999999999999999875
No 384
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=96.14 E-value=0.016 Score=48.09 Aligned_cols=43 Identities=30% Similarity=0.333 Sum_probs=36.6
Q ss_pred CcEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHH
Q 022407 5 MKVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKS 47 (297)
Q Consensus 5 ~~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~ 47 (297)
-++|.|.|+ |-+|..+|..|++.|++|++.+++++.++...+.
T Consensus 9 ~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~ 52 (253)
T 3qiv_A 9 NKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQ 52 (253)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence 356778887 8999999999999999999999999887766443
No 385
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=96.14 E-value=0.0065 Score=52.06 Aligned_cols=88 Identities=20% Similarity=0.117 Sum_probs=52.9
Q ss_pred CcEEEEECCChhHHHHHHHHHH----CCCcEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCc
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVM----DGLDVW-LVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNL 79 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~----~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 79 (297)
..||+|||+|.||...+..+.. .+++++ ++|++.. .+. ..+. .+|+
T Consensus 7 ~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~----------------a~~------------~g~~-~~~~ 57 (294)
T 1lc0_A 7 KFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRREL----------------GSL------------DEVR-QISL 57 (294)
T ss_dssp SEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSCC----------------CEE------------TTEE-BCCH
T ss_pred cceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchHH----------------HHH------------cCCC-CCCH
Confidence 4699999999999999888764 356655 6776521 000 0122 3566
Q ss_pred cc-cc--CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccH
Q 022407 80 KD-LH--SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISI 125 (297)
Q Consensus 80 ~~-~~--~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~ 125 (297)
++ ++ +.|+|++|+|...+. ..+...++. +..+++.-..+...
T Consensus 58 ~ell~~~~vD~V~i~tp~~~H~-~~~~~al~a---GkhVl~EKPla~~~ 102 (294)
T 1lc0_A 58 EDALRSQEIDVAYICSESSSHE-DYIRQFLQA---GKHVLVEYPMTLSF 102 (294)
T ss_dssp HHHHHCSSEEEEEECSCGGGHH-HHHHHHHHT---TCEEEEESCSCSCH
T ss_pred HHHhcCCCCCEEEEeCCcHhHH-HHHHHHHHC---CCcEEEeCCCCCCH
Confidence 66 43 689999999987763 222222332 23356544444444
No 386
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=96.13 E-value=0.0024 Score=57.99 Aligned_cols=37 Identities=24% Similarity=0.300 Sum_probs=31.2
Q ss_pred CCCCCcEEEEECCChhHHHHHHHHHHCC------CcEEEEeCC
Q 022407 1 MEEKMKVMGVVGSGQMGSGIAQLGVMDG------LDVWLVDTD 37 (297)
Q Consensus 1 M~~~~~~V~iiG~G~mG~~iA~~l~~~G------~~V~~~d~~ 37 (297)
|..+.++|+|||+|..|.+.|..|+++| ++|++++.+
T Consensus 1 M~~~~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~ 43 (470)
T 3i6d_A 1 MSDGKKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEAS 43 (470)
T ss_dssp ----CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSS
T ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECC
Confidence 6555578999999999999999999999 999999986
No 387
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=96.09 E-value=0.008 Score=55.75 Aligned_cols=36 Identities=17% Similarity=0.217 Sum_probs=32.8
Q ss_pred CcEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHH
Q 022407 5 MKVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDA 40 (297)
Q Consensus 5 ~~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~ 40 (297)
.|+|.|.|+ |.+|+.++..|++.|++|++++|++..
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~ 183 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPK 183 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence 579999995 999999999999999999999998653
No 388
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=96.08 E-value=0.0091 Score=50.52 Aligned_cols=33 Identities=24% Similarity=0.266 Sum_probs=31.0
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDP 38 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~ 38 (297)
++|.|||+|.+|..-+..|.+.|++|++++.+.
T Consensus 14 k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 14 KRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp CEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 689999999999999999999999999999764
No 389
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=96.07 E-value=0.014 Score=49.78 Aligned_cols=42 Identities=29% Similarity=0.271 Sum_probs=36.9
Q ss_pred cEEEEEC-CChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHH
Q 022407 6 KVMGVVG-SGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKS 47 (297)
Q Consensus 6 ~~V~iiG-~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~ 47 (297)
+++.|+| +|-+|++++..|++.|.+|++++|++++.+.+.+.
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~ 162 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADS 162 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHH
Confidence 6899999 89999999999999999999999998877665443
No 390
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=96.07 E-value=0.094 Score=43.77 Aligned_cols=41 Identities=24% Similarity=0.335 Sum_probs=35.1
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRATK 46 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~ 46 (297)
+++.|.|+ |-+|..+|..|++.|++|.+.+++.++++...+
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~ 53 (264)
T 3ucx_A 12 KVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAK 53 (264)
T ss_dssp CEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred cEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHH
Confidence 46777777 789999999999999999999999988776543
No 391
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=96.06 E-value=0.0085 Score=49.29 Aligned_cols=35 Identities=23% Similarity=0.308 Sum_probs=31.8
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCC--cEEEEeCCHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGL--DVWLVDTDPDA 40 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~--~V~~~d~~~~~ 40 (297)
++|.|.|+ |.+|+.++..|++.|+ +|++.+|+++.
T Consensus 19 ~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~ 56 (242)
T 2bka_A 19 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLT 56 (242)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCC
T ss_pred CeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCC
Confidence 58999995 9999999999999999 99999998754
No 392
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=96.05 E-value=0.0054 Score=51.94 Aligned_cols=35 Identities=17% Similarity=0.258 Sum_probs=32.5
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDA 40 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~ 40 (297)
++|.|.|+|.+|+.++..|++.|++|++++|+++.
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~ 38 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQP 38 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 68999999999999999999999999999998653
No 393
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=96.05 E-value=0.0038 Score=54.47 Aligned_cols=32 Identities=28% Similarity=0.184 Sum_probs=30.2
Q ss_pred cEEEEECCChhHHHHHHHHHH---CCCcEEEEeCC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVM---DGLDVWLVDTD 37 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~---~G~~V~~~d~~ 37 (297)
++|.|||+|..|...|..|++ +|++|+++|++
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~ 36 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKA 36 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECC
Confidence 579999999999999999999 99999999976
No 394
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=96.04 E-value=0.063 Score=44.61 Aligned_cols=40 Identities=30% Similarity=0.371 Sum_probs=35.1
Q ss_pred CcEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 5 MKVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 5 ~~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
-++|.|.|+ |-+|..+|..|++.|++|++.+++++.+++.
T Consensus 9 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~ 49 (261)
T 3n74_A 9 GKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERV 49 (261)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 357888887 7899999999999999999999999877665
No 395
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=96.03 E-value=0.0047 Score=55.77 Aligned_cols=35 Identities=20% Similarity=0.226 Sum_probs=31.6
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHH
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPD 39 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~ 39 (297)
..+|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~ 61 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARA 61 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 34799999999999999999999999999998764
No 396
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=96.02 E-value=0.033 Score=50.78 Aligned_cols=77 Identities=16% Similarity=0.182 Sum_probs=51.4
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEe-c--Ccccc
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCT-S--NLKDL 82 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~-~--~~~~~ 82 (297)
++|.|||+|..|..-+..|.++|.+|+++|.+... .+ ..+.+.+. +++. . ..+++
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~~~--~~--------~~l~~~~~------------i~~~~~~~~~~~l 70 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAGARLTVNALTFIP--QF--------TVWANEGM------------LTLVEGPFDETLL 70 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCH--HH--------HHHHTTTS------------CEEEESSCCGGGG
T ss_pred CEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCCCH--HH--------HHHHhcCC------------EEEEECCCCcccc
Confidence 68999999999999999999999999999985432 11 11122222 1221 1 23457
Q ss_pred cCCcEEEEecccCHHHHHHHHHH
Q 022407 83 HSADIIVEAIVESEDVKKKLFSE 105 (297)
Q Consensus 83 ~~aD~Vi~~v~e~~~~k~~~~~~ 105 (297)
.++|+||.+. ++..+...+...
T Consensus 71 ~~~~lVi~at-~~~~~n~~i~~~ 92 (457)
T 1pjq_A 71 DSCWLAIAAT-DDDTVNQRVSDA 92 (457)
T ss_dssp TTCSEEEECC-SCHHHHHHHHHH
T ss_pred CCccEEEEcC-CCHHHHHHHHHH
Confidence 8999998864 455555555544
No 397
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=96.02 E-value=0.0053 Score=55.15 Aligned_cols=33 Identities=18% Similarity=0.227 Sum_probs=30.8
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDP 38 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~ 38 (297)
|+|.|||+|..|.+.|..|+++|++|+++|.++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~ 33 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSA 33 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 479999999999999999999999999999864
No 398
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=96.02 E-value=0.0071 Score=51.08 Aligned_cols=68 Identities=22% Similarity=0.269 Sum_probs=49.8
Q ss_pred cEEEEECCChh-HHHHHHHHHHC--CCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-
Q 022407 6 KVMGVVGSGQM-GSGIAQLGVMD--GLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD- 81 (297)
Q Consensus 6 ~~V~iiG~G~m-G~~iA~~l~~~--G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~- 81 (297)
+++.|||.|.+ |.++|..|... |..|++.+++.. ++.+
T Consensus 159 k~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t~--------------------------------------~L~~~ 200 (281)
T 2c2x_A 159 AHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGTR--------------------------------------DLPAL 200 (281)
T ss_dssp CEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTCS--------------------------------------CHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECchh--------------------------------------HHHHH
Confidence 68999999975 99999999999 889999975432 3333
Q ss_pred ccCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEee
Q 022407 82 LHSADIIVEAIVESEDVKKKLFSELDKITKASAILAS 118 (297)
Q Consensus 82 ~~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s 118 (297)
++.||+||.+++...-++. ++++++++++.
T Consensus 201 ~~~ADIVI~Avg~p~~I~~-------~~vk~GavVID 230 (281)
T 2c2x_A 201 TRQADIVVAAVGVAHLLTA-------DMVRPGAAVID 230 (281)
T ss_dssp HTTCSEEEECSCCTTCBCG-------GGSCTTCEEEE
T ss_pred HhhCCEEEECCCCCcccCH-------HHcCCCcEEEE
Confidence 6789999999974432322 23466776663
No 399
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=96.02 E-value=0.016 Score=47.87 Aligned_cols=46 Identities=22% Similarity=0.147 Sum_probs=37.6
Q ss_pred CCCCCcEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHH
Q 022407 1 MEEKMKVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRATK 46 (297)
Q Consensus 1 M~~~~~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~ 46 (297)
|.-.-++|.|.|+ |-+|..+|..|++.|++|.+.+++++..+...+
T Consensus 1 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~ 47 (247)
T 3lyl_A 1 MSLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFEN 47 (247)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 4333467777777 899999999999999999999999987766543
No 400
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=96.01 E-value=0.041 Score=47.85 Aligned_cols=148 Identities=15% Similarity=0.172 Sum_probs=76.0
Q ss_pred EEEEECCChhHHHHHHHHHHC---CCcEEEE-eC-CHHHHHHHHHHHHHHHHHHHHcCCCChhhhcc-------cCCceE
Q 022407 7 VMGVVGSGQMGSGIAQLGVMD---GLDVWLV-DT-DPDALVRATKSISSSIQKFVSKGQLSQAMGTD-------APRRLR 74 (297)
Q Consensus 7 ~V~iiG~G~mG~~iA~~l~~~---G~~V~~~-d~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-------~~~~i~ 74 (297)
||+|+|+|.+|+.+.+.|..+ .++|..+ |+ +.+.+..+.+ .--..|.+... ... .-..+.
T Consensus 2 kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~~~~~~~~~ll~-------~ds~~g~~~~~-v~~~~~~l~v~g~~i~ 73 (332)
T 1hdg_O 2 RVAINGFGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLK-------YDSVHKKFPGK-VEYTENSLIVDGKEIK 73 (332)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHH-------CCTTTCCCSSC-EEECSSEEEETTEEEE
T ss_pred EEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcCCChHHhhhhcc-------CcCcCCCcCCc-EEEcCCEEEECCeEEE
Confidence 799999999999999988875 3676644 54 4443332210 00112333211 000 012344
Q ss_pred Eec--Cccccc----CCcEEEEecccCHHHHHHHHHHHHhhccCCe--EEeecCCCccHHHHhhhcCCCCeEEEeecCCC
Q 022407 75 CTS--NLKDLH----SADIIVEAIVESEDVKKKLFSELDKITKASA--ILASNTSSISITRLASATSRPCQVIGMHFMNP 146 (297)
Q Consensus 75 ~~~--~~~~~~----~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~--ii~s~ts~~~~~~l~~~~~~~~~~~g~h~~~p 146 (297)
+.. +++++. ++|+||+|.|..... +. ...+++.++ +|+++++. . .|. ....-+|+
T Consensus 74 v~~~~dp~~l~w~~~~vDvV~~atg~~~s~--e~---a~~~l~aGakkvVId~~a~-d---------~p~--~~V~eVN~ 136 (332)
T 1hdg_O 74 VFAEPDPSKLPWKDLGVDFVIESTGVFRNR--EK---AELHLQAGAKKVIITAPAK-G---------EDI--TVVIGCNE 136 (332)
T ss_dssp EECCSSGGGSCHHHHTCCEEEECSSSCCBH--HH---HTHHHHTTCSEEEESSCCB-S---------CSE--ECCTTTTG
T ss_pred EEecCChHHCcccccCCCEEEECCccchhH--HH---HHHHHHcCCcEEEEeCCCC-C---------CCc--eEEeccCH
Confidence 442 455552 899999999865542 12 223344455 77776653 0 111 11111222
Q ss_pred CCCCcceeEecCCCChHHHHH-HHHHHHHHhCCe
Q 022407 147 PPLMKLVEVIRGADTSDETFR-ATKALAERFGKT 179 (297)
Q Consensus 147 ~~~~~~vev~~~~~~~~~~~~-~~~~l~~~lG~~ 179 (297)
-.+.+-..++..+++...... .+.++.+..|-.
T Consensus 137 ~~i~~~~~iIsNpsCttn~lap~lkpL~~~~gI~ 170 (332)
T 1hdg_O 137 DQLKPEHTIISCASCTTNSIAPIVKVLHEKFGIV 170 (332)
T ss_dssp GGCCTTCCEEECCCHHHHHHHHHHHHHHHHHCEE
T ss_pred HHhCCCCcEEECCccHHHHHHHHHHHHHHhcCee
Confidence 111112347777776665544 455666677653
No 401
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=96.01 E-value=0.03 Score=49.10 Aligned_cols=100 Identities=21% Similarity=0.245 Sum_probs=52.6
Q ss_pred CCCCCcEEEEEC-CChhHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecC
Q 022407 1 MEEKMKVMGVVG-SGQMGSGIAQLGVMDGL-DVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSN 78 (297)
Q Consensus 1 M~~~~~~V~iiG-~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 78 (297)
|+. ++||+|+| .|.+|+.+...|.++.. +++.+....+.-.+. .+ ..+.+.. ...+.+. +
T Consensus 1 M~~-~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~----~~------~~~~~~g------~~~~~~~-~ 62 (345)
T 2ozp_A 1 MTG-KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPV----HF------VHPNLRG------RTNLKFV-P 62 (345)
T ss_dssp ----CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBG----GG------TCGGGTT------TCCCBCB-C
T ss_pred CCC-CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchh----HH------hCchhcC------ccccccc-c
Confidence 533 36999999 59999999999987654 766654432210000 00 0000000 0111221 1
Q ss_pred cccccCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCc
Q 022407 79 LKDLHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSI 123 (297)
Q Consensus 79 ~~~~~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~ 123 (297)
.+++.++|+||+|+|.... .++.. .+...++.++++++..
T Consensus 63 ~~~~~~vDvV~~a~g~~~s--~~~a~---~~~~aG~~VId~Sa~~ 102 (345)
T 2ozp_A 63 PEKLEPADILVLALPHGVF--AREFD---RYSALAPVLVDLSADF 102 (345)
T ss_dssp GGGCCCCSEEEECCCTTHH--HHTHH---HHHTTCSEEEECSSTT
T ss_pred hhHhcCCCEEEEcCCcHHH--HHHHH---HHHHCCCEEEEcCccc
Confidence 2235789999999997664 22322 2334455566666643
No 402
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=95.99 E-value=0.0059 Score=56.83 Aligned_cols=38 Identities=29% Similarity=0.383 Sum_probs=34.0
Q ss_pred CCCCCcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCH
Q 022407 1 MEEKMKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDP 38 (297)
Q Consensus 1 M~~~~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~ 38 (297)
|......|.|||+|..|...|..|++.|++|+++|+++
T Consensus 1 M~~~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~ 38 (535)
T 3ihg_A 1 MNDHEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRP 38 (535)
T ss_dssp CCCCSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred CCCccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 65544689999999999999999999999999999875
No 403
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=95.95 E-value=0.019 Score=50.45 Aligned_cols=31 Identities=16% Similarity=0.314 Sum_probs=24.6
Q ss_pred CcEEEEEC-CChhHHHHHHHHHHCC-CcEEEEe
Q 022407 5 MKVMGVVG-SGQMGSGIAQLGVMDG-LDVWLVD 35 (297)
Q Consensus 5 ~~~V~iiG-~G~mG~~iA~~l~~~G-~~V~~~d 35 (297)
+.||+|+| .|.+|..+...|..+. ++|+.+.
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~ 36 (350)
T 2ep5_A 4 KIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVS 36 (350)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred CcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEe
Confidence 36899999 6999999999887653 4666553
No 404
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=95.95 E-value=0.0067 Score=53.49 Aligned_cols=30 Identities=23% Similarity=0.385 Sum_probs=24.9
Q ss_pred cEEEEEC-CChhHHHHHHHHHHCC-CcEEEEe
Q 022407 6 KVMGVVG-SGQMGSGIAQLGVMDG-LDVWLVD 35 (297)
Q Consensus 6 ~~V~iiG-~G~mG~~iA~~l~~~G-~~V~~~d 35 (297)
+||+|+| .|.+|..++..|.++. ++|+.+.
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~ 40 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPMFELTALA 40 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEE
Confidence 5899999 7999999999988764 5776664
No 405
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=95.95 E-value=0.032 Score=48.76 Aligned_cols=39 Identities=18% Similarity=0.131 Sum_probs=34.9
Q ss_pred cEEEEECCChhHHHHHHHHHHCCC-cEEEEeCCHHHHHHH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGL-DVWLVDTDPDALVRA 44 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~ 44 (297)
++|.|+|+|.+|...++.+...|. +|++.++++++++.+
T Consensus 169 ~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~ 208 (348)
T 2d8a_A 169 KSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELA 208 (348)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence 579999999999999988888999 999999998887665
No 406
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=95.95 E-value=0.017 Score=48.56 Aligned_cols=42 Identities=24% Similarity=0.344 Sum_probs=35.8
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKS 47 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~ 47 (297)
+++.|.|+ |-+|..+|..|++.|++|.+.++++++++...+.
T Consensus 5 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~ 47 (264)
T 3tfo_A 5 KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATE 47 (264)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence 46777777 8899999999999999999999999887766443
No 407
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=95.94 E-value=0.02 Score=47.61 Aligned_cols=39 Identities=23% Similarity=0.256 Sum_probs=34.4
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
++|.|.|+ |.+|..+|..|++.|++|++.+++++..+..
T Consensus 14 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~ 53 (260)
T 3awd_A 14 RVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKA 53 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 57888877 9999999999999999999999998776554
No 408
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=95.93 E-value=0.02 Score=47.40 Aligned_cols=39 Identities=28% Similarity=0.391 Sum_probs=34.2
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
++|.|.|+ |.+|..+|..|++.|++|++.+|++++++..
T Consensus 12 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~ 51 (254)
T 2wsb_A 12 ACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRA 51 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 56888877 9999999999999999999999998876554
No 409
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=95.93 E-value=0.016 Score=48.61 Aligned_cols=42 Identities=21% Similarity=0.244 Sum_probs=34.9
Q ss_pred EEEEE-CC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHH
Q 022407 7 VMGVV-GS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSI 48 (297)
Q Consensus 7 ~V~ii-G~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~ 48 (297)
|+++| |+ +-+|.++|..|++.|.+|.++|++++++++..+.+
T Consensus 8 KvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i 51 (254)
T 4fn4_A 8 KVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQEL 51 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHH
Confidence 45555 65 78999999999999999999999999887765543
No 410
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=95.92 E-value=0.12 Score=42.97 Aligned_cols=41 Identities=29% Similarity=0.408 Sum_probs=35.5
Q ss_pred cEEEEECC-C-hhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHH
Q 022407 6 KVMGVVGS-G-QMGSGIAQLGVMDGLDVWLVDTDPDALVRATK 46 (297)
Q Consensus 6 ~~V~iiG~-G-~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~ 46 (297)
++|.|.|+ | -+|..+|..|++.|++|++.+++.+.++...+
T Consensus 23 k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~ 65 (266)
T 3o38_A 23 KVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRD 65 (266)
T ss_dssp CEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHH
Confidence 57888898 8 49999999999999999999999987766533
No 411
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=95.91 E-value=0.029 Score=48.99 Aligned_cols=36 Identities=19% Similarity=0.225 Sum_probs=26.8
Q ss_pred cEEEEECCChhHHHHHHHHHHCC---CcEEE-EeC-CHHHH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDG---LDVWL-VDT-DPDAL 41 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G---~~V~~-~d~-~~~~~ 41 (297)
.||+|+|+|.+|+.+...|..++ ++|.. .|+ +++.+
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd~~~~~~~ 43 (339)
T 3b1j_A 3 IRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTA 43 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEECSSCHHHH
T ss_pred eEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEecCCCHHHH
Confidence 48999999999999999988863 56554 444 44433
No 412
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=95.90 E-value=0.011 Score=49.37 Aligned_cols=40 Identities=13% Similarity=0.113 Sum_probs=32.6
Q ss_pred cEEEEECCC---hhHHHHHHHHHHCCCcEEEEeCCHHHHHHHH
Q 022407 6 KVMGVVGSG---QMGSGIAQLGVMDGLDVWLVDTDPDALVRAT 45 (297)
Q Consensus 6 ~~V~iiG~G---~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~ 45 (297)
+++.|-|++ -+|.++|..|++.|.+|.+.+|+++.++++.
T Consensus 7 K~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~ 49 (256)
T 4fs3_A 7 KTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELE 49 (256)
T ss_dssp CEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHH
T ss_pred CEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 445555864 5999999999999999999999988776653
No 413
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=95.90 E-value=0.0072 Score=54.52 Aligned_cols=33 Identities=27% Similarity=0.402 Sum_probs=30.6
Q ss_pred cEEEEECCChhHHHHHHHHHHCCC-cEEEEeCCH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGL-DVWLVDTDP 38 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~-~V~~~d~~~ 38 (297)
..|.|||+|..|.+.|..|+++|+ +|+++|+++
T Consensus 7 ~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~ 40 (438)
T 3dje_A 7 SSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYP 40 (438)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 479999999999999999999999 999999754
No 414
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=95.89 E-value=0.062 Score=45.50 Aligned_cols=40 Identities=18% Similarity=0.205 Sum_probs=34.2
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRAT 45 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~ 45 (297)
+++.|.|+ |-+|..+|..|++.|++|.+.+++.+.++...
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~ 69 (283)
T 3v8b_A 29 PVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVA 69 (283)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 45667776 88999999999999999999999998776653
No 415
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=95.88 E-value=0.026 Score=47.11 Aligned_cols=41 Identities=32% Similarity=0.374 Sum_probs=35.1
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRATK 46 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~ 46 (297)
++|.|.|+ |-+|..+|..|++.|++|++.+|++++++...+
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 49 (263)
T 3ai3_A 8 KVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAAR 49 (263)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 56778877 899999999999999999999999887665533
No 416
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=95.88 E-value=0.0084 Score=50.57 Aligned_cols=36 Identities=14% Similarity=0.303 Sum_probs=31.9
Q ss_pred EEEEECC-ChhHHHHHHHHHHC--CCcEEEEeCCHHHHH
Q 022407 7 VMGVVGS-GQMGSGIAQLGVMD--GLDVWLVDTDPDALV 42 (297)
Q Consensus 7 ~V~iiG~-G~mG~~iA~~l~~~--G~~V~~~d~~~~~~~ 42 (297)
+|.|.|+ |.+|+.++..|++. |++|++.+|++++.+
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~ 39 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQ 39 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCH
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhh
Confidence 4789998 99999999999998 999999999876543
No 417
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=95.88 E-value=0.0075 Score=54.01 Aligned_cols=34 Identities=21% Similarity=0.236 Sum_probs=31.4
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCc-EEEEeCCHH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLD-VWLVDTDPD 39 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~-V~~~d~~~~ 39 (297)
.+|.|||+|..|...|..|+++|++ |+++|+++.
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~ 39 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQAGIGKVTLLESSSE 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCC
Confidence 5899999999999999999999999 999998643
No 418
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=95.87 E-value=0.049 Score=48.18 Aligned_cols=36 Identities=19% Similarity=0.274 Sum_probs=26.6
Q ss_pred cEEEEECCChhHHHHHHHHHHCC---CcEEEE-eC-CHHHH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDG---LDVWLV-DT-DPDAL 41 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G---~~V~~~-d~-~~~~~ 41 (297)
.||+|+|+|.+|+.+...|..++ ++|..+ |+ +++.+
T Consensus 3 ikVgInGfGrIGr~vlR~l~~~~~~~veIVaInd~~d~~~~ 43 (380)
T 2d2i_A 3 IRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTA 43 (380)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECSSCHHHH
T ss_pred cEEEEECcCHHHHHHHHHHhcCCCCCEEEEEEecCCCHHHH
Confidence 58999999999999999988763 565543 44 44433
No 419
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=95.86 E-value=0.029 Score=48.88 Aligned_cols=149 Identities=19% Similarity=0.248 Sum_probs=74.5
Q ss_pred cEEEEECCChhHHHHHHHHHHC-CCcEEEE-eC-CHHHHHHHHHHHHHHHHHHHHcCCCChhhhcc-------cCCceEE
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMD-GLDVWLV-DT-DPDALVRATKSISSSIQKFVSKGQLSQAMGTD-------APRRLRC 75 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~-G~~V~~~-d~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-------~~~~i~~ 75 (297)
.||+|+|+|.+|+.+.+.+..+ .++|..+ |. +.+.+..+ +..--..|.+... ... .-..+.+
T Consensus 2 ikVgI~G~G~iGr~l~R~l~~~~~veivain~~~~~~~~~~l-------l~~ds~~G~~~~~-v~~~~~~l~v~g~~i~v 73 (334)
T 3cmc_O 2 VKVGINGFGRIGRNVFRAALKNPDIEVVAVNDLTDANTLAHL-------LKYDSVHGRLDAE-VSVNGNNLVVNGKEIIV 73 (334)
T ss_dssp EEEEEESCSHHHHHHHHHHTTCTTEEEEEEECSSCHHHHHHH-------HHEETTTEECSSC-EEEETTEEEETTEEEEE
T ss_pred eEEEEECCCHHHHHHHHHHhCCCCeEEEEEeCCCCHHHHHHH-------hccCCcCCCcCce-EEEccCcEEECCEEEEE
Confidence 4899999999999999988776 4465533 43 33333222 1000112322110 000 0123444
Q ss_pred ec--Ccccc--c--CCcEEEEecccCHHHHHHHHHHHHhhccCCe--EEeecCCCccHHHHhhhcCCCCeEEEeecCCCC
Q 022407 76 TS--NLKDL--H--SADIIVEAIVESEDVKKKLFSELDKITKASA--ILASNTSSISITRLASATSRPCQVIGMHFMNPP 147 (297)
Q Consensus 76 ~~--~~~~~--~--~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~--ii~s~ts~~~~~~l~~~~~~~~~~~g~h~~~p~ 147 (297)
.. +++++ + ++|+||+|.|..... +. ...+++.++ +|+++++. . ..| ....-+|.-
T Consensus 74 ~~~~dp~~i~w~~~~vDvV~~atg~~~s~--e~---a~~~l~~Gak~vVId~pa~-d--------~~p---~~V~eVN~~ 136 (334)
T 3cmc_O 74 KAERDPENLAWGEIGVDIVVESTGRFTKR--ED---AAKHLEAGAKKVIISAPAK-N--------EDI---TIVMGVNQD 136 (334)
T ss_dssp ECCSSGGGCCTGGGTCCEEEECSSSCCBH--HH---HTHHHHTTCSEEEESSCCB-S--------CSE---ECCTTTSGG
T ss_pred EecCChhhcCcccCccCEEEECCCchhhH--HH---HHHHHHCCCCEEEEeCCCc-c--------CCC---EeccccCHH
Confidence 32 44444 2 799999999865532 12 223344455 78777654 1 001 111111221
Q ss_pred CCCc-ceeEecCCCChHHHHH-HHHHHHHHhCCe
Q 022407 148 PLMK-LVEVIRGADTSDETFR-ATKALAERFGKT 179 (297)
Q Consensus 148 ~~~~-~vev~~~~~~~~~~~~-~~~~l~~~lG~~ 179 (297)
.+.+ ...++..+++...... .+.++.+..|-.
T Consensus 137 ~i~~~~~~IIsNpsCttn~lap~lkpL~~~~gI~ 170 (334)
T 3cmc_O 137 KYDPKAHHVISNASCTTNCLAPFAKVLHEQFGIV 170 (334)
T ss_dssp GCCTTTCCEEECCCHHHHHHHHHHHHHHHHHCEE
T ss_pred HhCccCCeEEECCChHHHHHHHHHHHHHHhcCce
Confidence 1111 1347777776655544 455666667643
No 420
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=95.85 E-value=0.024 Score=47.26 Aligned_cols=41 Identities=20% Similarity=0.189 Sum_probs=35.2
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRATK 46 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~ 46 (297)
++|.|.|+ |-+|..+|..|++.|++|++.+|++++++...+
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 49 (260)
T 2z1n_A 8 KLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAAS 49 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 56778877 899999999999999999999999887766543
No 421
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=95.84 E-value=0.022 Score=47.61 Aligned_cols=39 Identities=33% Similarity=0.425 Sum_probs=34.1
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
++|.|.|+ |-+|..+|..|++.|++|++.+++++.++..
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~ 47 (262)
T 1zem_A 8 KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKA 47 (262)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 56777776 8999999999999999999999998876654
No 422
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=95.84 E-value=0.023 Score=52.08 Aligned_cols=36 Identities=19% Similarity=0.351 Sum_probs=32.4
Q ss_pred CCcEEEEECCChhHHH-HHHHHHHCCCcEEEEeCCHH
Q 022407 4 KMKVMGVVGSGQMGSG-IAQLGVMDGLDVWLVDTDPD 39 (297)
Q Consensus 4 ~~~~V~iiG~G~mG~~-iA~~l~~~G~~V~~~d~~~~ 39 (297)
.+++|.|||.|..|.+ +|..|.+.|++|.++|....
T Consensus 17 ~~~~i~viG~G~sG~s~~A~~l~~~G~~V~~~D~~~~ 53 (475)
T 1p3d_A 17 RVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADG 53 (475)
T ss_dssp TCCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCS
T ss_pred cCCEEEEEeecHHHHHHHHHHHHhCCCEEEEECCCCC
Confidence 3678999999999997 99999999999999998764
No 423
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=95.84 E-value=0.012 Score=50.51 Aligned_cols=90 Identities=19% Similarity=0.123 Sum_probs=57.6
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccc-cc
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKD-LH 83 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~~ 83 (297)
.+|+|+|+ |.||..++..+.+.|++ .+++.++.+. |. . ...+.+..++++ ..
T Consensus 14 ~~v~V~Gasg~~G~~~~~~l~~~g~~-~V~~VnP~~~-----------------g~-------~-i~G~~vy~sl~el~~ 67 (294)
T 2yv1_A 14 TKAIVQGITGRQGSFHTKKMLECGTK-IVGGVTPGKG-----------------GQ-------N-VHGVPVFDTVKEAVK 67 (294)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCC-EEEEECTTCT-----------------TC-------E-ETTEEEESSHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHHHhCCCe-EEEEeCCCCC-----------------Cc-------e-ECCEeeeCCHHHHhh
Confidence 46888899 99999999999999999 6677776421 00 0 112466777777 44
Q ss_pred --CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccH
Q 022407 84 --SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISI 125 (297)
Q Consensus 84 --~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~ 125 (297)
++|++|.++|... ..+++.+..+. .-..+++ -|.+++.
T Consensus 68 ~~~~Dv~ii~vp~~~--~~~~v~ea~~~-Gi~~vVi-~t~G~~~ 107 (294)
T 2yv1_A 68 ETDANASVIFVPAPF--AKDAVFEAIDA-GIELIVV-ITEHIPV 107 (294)
T ss_dssp HHCCCEEEECCCHHH--HHHHHHHHHHT-TCSEEEE-CCSCCCH
T ss_pred cCCCCEEEEccCHHH--HHHHHHHHHHC-CCCEEEE-ECCCCCH
Confidence 7999999998543 33444443332 1232333 3556654
No 424
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.83 E-value=0.046 Score=47.54 Aligned_cols=39 Identities=31% Similarity=0.293 Sum_probs=35.1
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
++|.|+|+|.+|...++.+...|.+|+..++++++++.+
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~ 206 (340)
T 3s2e_A 168 QWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLA 206 (340)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Confidence 689999999999988888888999999999999987765
No 425
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=95.83 E-value=0.027 Score=47.00 Aligned_cols=40 Identities=20% Similarity=0.195 Sum_probs=34.5
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRAT 45 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~ 45 (297)
++|.|.|+ |-+|..+|..|++.|++|++.+++++.++...
T Consensus 10 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~ 50 (260)
T 2ae2_A 10 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCL 50 (260)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 56778876 89999999999999999999999988766543
No 426
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=95.81 E-value=0.0084 Score=52.98 Aligned_cols=33 Identities=30% Similarity=0.300 Sum_probs=30.5
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDP 38 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~ 38 (297)
..|.|||+|..|.+.|..|+++|++|+++|+..
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~ 36 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFD 36 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 479999999999999999999999999999753
No 427
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=95.81 E-value=0.017 Score=48.09 Aligned_cols=42 Identities=19% Similarity=0.332 Sum_probs=35.9
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKS 47 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~ 47 (297)
+++.|.|+ |-+|..+|..|++.|++|.+.+|++++++...+.
T Consensus 8 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~ 50 (252)
T 3h7a_A 8 ATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAE 50 (252)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 56777777 7899999999999999999999999887766443
No 428
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=95.81 E-value=0.007 Score=53.17 Aligned_cols=33 Identities=24% Similarity=0.435 Sum_probs=30.5
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDP 38 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~ 38 (297)
..|.|||+|..|...|..|+++|++|+++|+..
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~ 35 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHM 35 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 369999999999999999999999999999753
No 429
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.78 E-value=0.13 Score=44.98 Aligned_cols=39 Identities=23% Similarity=0.188 Sum_probs=34.6
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
++|.|+|+|.+|...++.+...|.+|++.++++++++.+
T Consensus 170 ~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~ 208 (352)
T 1e3j_A 170 TTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVA 208 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence 689999999999988888878999999999999887765
No 430
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=95.77 E-value=0.022 Score=46.83 Aligned_cols=40 Identities=18% Similarity=0.164 Sum_probs=35.1
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRAT 45 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~ 45 (297)
++|.|.|+ |-+|..+|..|++.|++|.+.+|++++++...
T Consensus 4 k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~ 44 (235)
T 3l6e_A 4 GHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQE 44 (235)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 57888887 88999999999999999999999998776653
No 431
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=95.76 E-value=0.053 Score=47.83 Aligned_cols=143 Identities=16% Similarity=0.193 Sum_probs=72.8
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCc---EEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEec-Ccc
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLD---VWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTS-NLK 80 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~---V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~-~~~ 80 (297)
.||+|||+ |..|.-+...|.+++|. +.++..... .|..-. .....+.+.+ +.+
T Consensus 3 ~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~s------------------aG~~~~----~~~~~~~~~~~~~~ 60 (366)
T 3pwk_A 3 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARS------------------AGKSLK----FKDQDITIEETTET 60 (366)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTT------------------TTCEEE----ETTEEEEEEECCTT
T ss_pred cEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEcccc------------------CCCcce----ecCCCceEeeCCHH
Confidence 58999995 99999999999998773 444432211 111000 0001122221 233
Q ss_pred cccCCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccHHHHhhhcCCCCeEEEeecCCCCCCCcceeEecCCC
Q 022407 81 DLHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISITRLASATSRPCQVIGMHFMNPPPLMKLVEVIRGAD 160 (297)
Q Consensus 81 ~~~~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~~~l~~~~~~~~~~~g~h~~~p~~~~~~vev~~~~~ 160 (297)
+++++|+||+|+|.... .+.... +...++.++.+++..-.. ... + .++.-+|+..+..--.++.+++
T Consensus 61 ~~~~~Dvvf~a~~~~~s--~~~a~~---~~~~G~~vIDlSa~~R~~---~~~--p---~~vpevN~~~i~~~~~iIanpg 127 (366)
T 3pwk_A 61 AFEGVDIALFSAGSSTS--AKYAPY---AVKAGVVVVDNTSYFRQN---PDV--P---LVVPEVNAHALDAHNGIIACPN 127 (366)
T ss_dssp TTTTCSEEEECSCHHHH--HHHHHH---HHHTTCEEEECSSTTTTC---TTS--C---BCCHHHHGGGGTTCCSEEECCC
T ss_pred HhcCCCEEEECCChHhH--HHHHHH---HHHCCCEEEEcCCccccC---CCc--e---EEEccCCHHHHcCCCCeEECCC
Confidence 47899999999985442 233333 334566677677643211 000 0 0111111111111123556666
Q ss_pred ChHHH-HHHHHHHHHHhCCeEEEe
Q 022407 161 TSDET-FRATKALAERFGKTVVCS 183 (297)
Q Consensus 161 ~~~~~-~~~~~~l~~~lG~~~v~~ 183 (297)
+.... .-.+.++.+..+-..+.+
T Consensus 128 C~tt~~~l~l~pL~~~~~i~~i~v 151 (366)
T 3pwk_A 128 CSTIQMMVALEPVRQKWGLDRIIV 151 (366)
T ss_dssp HHHHHHHHHHHHHHHHHCCSEEEE
T ss_pred cHHHHHHHHHHHHHHhCCCcEEEE
Confidence 55443 445567777777654443
No 432
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=95.75 E-value=0.0056 Score=53.24 Aligned_cols=34 Identities=15% Similarity=0.262 Sum_probs=26.4
Q ss_pred cEEEEECCChhHHHHHHHHHHC-------CCcEE-EEeCCHH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMD-------GLDVW-LVDTDPD 39 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~-------G~~V~-~~d~~~~ 39 (297)
.||+|||+|.||+.++..+.+. +.+|+ +.|++++
T Consensus 5 irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~ 46 (325)
T 3ing_A 5 IRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSY 46 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBE
T ss_pred EEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecChh
Confidence 5899999999999999998763 34444 5677654
No 433
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=95.75 E-value=0.0082 Score=53.15 Aligned_cols=33 Identities=30% Similarity=0.430 Sum_probs=31.2
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDP 38 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~ 38 (297)
..|.|||+|..|...|..|+++|++|+++|+++
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~ 37 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRP 37 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 479999999999999999999999999999876
No 434
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=95.75 E-value=0.029 Score=45.88 Aligned_cols=43 Identities=26% Similarity=0.329 Sum_probs=36.6
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSI 48 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~ 48 (297)
++|.|.|+ |-+|..+|..|++.|++|.+.+++.++++...+.+
T Consensus 3 k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 46 (235)
T 3l77_A 3 KVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHEL 46 (235)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 56778887 88999999999999999999999998877665443
No 435
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=95.75 E-value=0.023 Score=47.22 Aligned_cols=43 Identities=23% Similarity=0.283 Sum_probs=36.3
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSI 48 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~ 48 (297)
+++.|.|+ |-+|..+|..|++.|++|.+.+|+++.++...+.+
T Consensus 8 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 51 (250)
T 3nyw_A 8 GLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEI 51 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 46667777 89999999999999999999999998877765443
No 436
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=95.74 E-value=0.16 Score=42.55 Aligned_cols=42 Identities=21% Similarity=0.082 Sum_probs=34.4
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKS 47 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~ 47 (297)
+++.|.|+ |-+|..+|..|++.|++|.+.+++++.++...+.
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~ 71 (270)
T 3ftp_A 29 QVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAA 71 (270)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 34555566 8899999999999999999999999877765443
No 437
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=95.74 E-value=0.0076 Score=54.05 Aligned_cols=33 Identities=24% Similarity=0.148 Sum_probs=30.7
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDP 38 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~ 38 (297)
++|.|||+|..|.+.|..|+++|++|++++.+.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~ 33 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLP 33 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCC
Confidence 479999999999999999999999999999864
No 438
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=95.74 E-value=0.0091 Score=53.06 Aligned_cols=33 Identities=24% Similarity=0.262 Sum_probs=30.7
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDP 38 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~ 38 (297)
..|.|||+|..|.+.|..|+++|++|+++|+..
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~ 37 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAERGHRVLVLERHT 37 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 479999999999999999999999999999854
No 439
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=95.73 E-value=0.025 Score=47.40 Aligned_cols=41 Identities=20% Similarity=0.274 Sum_probs=34.5
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRATK 46 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~ 46 (297)
+++.|.|+ |-+|..+|..|++.|++|.+.+++++.++...+
T Consensus 11 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~ 52 (262)
T 3pk0_A 11 RSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVA 52 (262)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 45666676 899999999999999999999999988766543
No 440
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=95.73 E-value=0.0094 Score=52.55 Aligned_cols=32 Identities=25% Similarity=0.304 Sum_probs=30.3
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTD 37 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~ 37 (297)
..|.|||+|..|...|..|+++|++|+++|+.
T Consensus 18 ~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~ 49 (382)
T 1ryi_A 18 YEAVVIGGGIIGSAIAYYLAKENKNTALFESG 49 (382)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCC
Confidence 47999999999999999999999999999985
No 441
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=95.73 E-value=0.01 Score=51.50 Aligned_cols=42 Identities=26% Similarity=0.256 Sum_probs=35.3
Q ss_pred CCCcEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 3 EKMKVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 3 ~~~~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
...++|.|.|+ |.+|+.++..|++.|++|++.+++.+.....
T Consensus 3 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~ 45 (341)
T 3enk_A 3 STKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREA 45 (341)
T ss_dssp CSSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHH
T ss_pred CCCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHH
Confidence 34578999986 9999999999999999999999987654443
No 442
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=95.72 E-value=0.0072 Score=53.71 Aligned_cols=33 Identities=21% Similarity=0.186 Sum_probs=30.5
Q ss_pred cEEEEECCChhHHHHHHHHHH-CC-CcEEEEeCCH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVM-DG-LDVWLVDTDP 38 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~-~G-~~V~~~d~~~ 38 (297)
..|.|||+|..|...|..|++ +| ++|+++|++.
T Consensus 22 ~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~ 56 (405)
T 2gag_B 22 YDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW 56 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 479999999999999999999 99 9999999853
No 443
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=95.71 E-value=0.028 Score=46.74 Aligned_cols=43 Identities=21% Similarity=0.295 Sum_probs=36.1
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSI 48 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~ 48 (297)
++|.|.|+ |-+|..+|..|++.|++|.+.++++++++...+.+
T Consensus 13 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 56 (252)
T 3f1l_A 13 RIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHI 56 (252)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 46777777 88999999999999999999999998877664443
No 444
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=95.71 E-value=0.032 Score=46.95 Aligned_cols=40 Identities=15% Similarity=0.081 Sum_probs=34.8
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRAT 45 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~ 45 (297)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...
T Consensus 32 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~ 72 (272)
T 1yb1_A 32 EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETA 72 (272)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHH
Confidence 57888876 89999999999999999999999988766543
No 445
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=95.70 E-value=0.009 Score=53.22 Aligned_cols=33 Identities=27% Similarity=0.377 Sum_probs=31.0
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDP 38 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~ 38 (297)
++|+|||+|..|...|..|+++|++|++++.+.
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~ 36 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRD 36 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecC
Confidence 589999999999999999999999999999864
No 446
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=95.70 E-value=0.0075 Score=52.05 Aligned_cols=33 Identities=15% Similarity=0.123 Sum_probs=30.9
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCCcEEEEeCC
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTD 37 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~ 37 (297)
.++|.|||+|.-|...|..|++.|++|+++|+.
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~ 54 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARAEIKPILYEGM 54 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecC
Confidence 468999999999999999999999999999984
No 447
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=95.70 E-value=0.027 Score=51.89 Aligned_cols=36 Identities=28% Similarity=0.482 Sum_probs=32.4
Q ss_pred CCcEEEEECCChhHHH-HHHHHHHCCCcEEEEeCCHH
Q 022407 4 KMKVMGVVGSGQMGSG-IAQLGVMDGLDVWLVDTDPD 39 (297)
Q Consensus 4 ~~~~V~iiG~G~mG~~-iA~~l~~~G~~V~~~d~~~~ 39 (297)
.+++|.|||.|..|.+ +|..|.+.|++|.++|....
T Consensus 18 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~ 54 (491)
T 2f00_A 18 RVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPN 54 (491)
T ss_dssp TCCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCC
T ss_pred cCCEEEEEEcCHHHHHHHHHHHHhCCCeEEEECCCCC
Confidence 3578999999999997 99999999999999998764
No 448
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.70 E-value=0.061 Score=46.79 Aligned_cols=39 Identities=28% Similarity=0.343 Sum_probs=35.3
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
++|.|+|+|.+|...++.+...|.+|+..++++++++.+
T Consensus 166 ~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~ 204 (339)
T 1rjw_A 166 EWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELA 204 (339)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 689999999999999988888999999999999887765
No 449
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=95.70 E-value=0.017 Score=48.37 Aligned_cols=43 Identities=23% Similarity=0.247 Sum_probs=35.5
Q ss_pred cEEEEE-CC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHH
Q 022407 6 KVMGVV-GS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSI 48 (297)
Q Consensus 6 ~~V~ii-G~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~ 48 (297)
-|+++| |+ +-+|.++|..|++.|.+|.+.|++++.+++..+.+
T Consensus 9 gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l 53 (255)
T 4g81_D 9 GKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTL 53 (255)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 367666 44 88999999999999999999999998877764443
No 450
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=95.70 E-value=0.13 Score=42.70 Aligned_cols=39 Identities=21% Similarity=0.200 Sum_probs=34.2
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++..
T Consensus 8 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~ 47 (264)
T 2pd6_A 8 ALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQET 47 (264)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Confidence 57888877 8999999999999999999999998876654
No 451
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=95.69 E-value=0.063 Score=44.69 Aligned_cols=39 Identities=28% Similarity=0.385 Sum_probs=34.0
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
+++.|.|+ |-+|..+|..|++.|++|.+.+++++.++..
T Consensus 7 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~ 46 (257)
T 3imf_A 7 KVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEA 46 (257)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 45667776 8899999999999999999999999887665
No 452
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=95.69 E-value=0.032 Score=47.08 Aligned_cols=40 Identities=25% Similarity=0.318 Sum_probs=34.4
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRAT 45 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~ 45 (297)
++|.|.|+ |-+|..+|..|++.|++|++.+|+++.++...
T Consensus 23 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~ 63 (277)
T 2rhc_B 23 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTL 63 (277)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 56777776 89999999999999999999999988766543
No 453
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=95.68 E-value=0.0037 Score=56.88 Aligned_cols=34 Identities=32% Similarity=0.382 Sum_probs=31.5
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPD 39 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~ 39 (297)
..|.|||+|..|...|..|+++|++|+++|+++.
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~ 40 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPW 40 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 4699999999999999999999999999998764
No 454
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=95.68 E-value=0.025 Score=49.88 Aligned_cols=97 Identities=16% Similarity=0.179 Sum_probs=54.8
Q ss_pred cEEEEEC-CChhHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCccccc
Q 022407 6 KVMGVVG-SGQMGSGIAQLGVMDGL-DVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDLH 83 (297)
Q Consensus 6 ~~V~iiG-~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 83 (297)
.||+|+| .|.+|..+...|.++.. ++..+....+.-.+. .+ ..+.+... ....+.+.+ .+..+
T Consensus 17 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~----~~------~~~~~~~~----v~~dl~~~~-~~~~~ 81 (359)
T 1xyg_A 17 IRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSM----ES------VFPHLRAQ----KLPTLVSVK-DADFS 81 (359)
T ss_dssp EEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCH----HH------HCGGGTTS----CCCCCBCGG-GCCGG
T ss_pred cEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCH----HH------hCchhcCc----ccccceecc-hhHhc
Confidence 5899999 69999999999988753 776664332211000 00 01110000 001122222 22356
Q ss_pred CCcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCc
Q 022407 84 SADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSI 123 (297)
Q Consensus 84 ~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~ 123 (297)
++|+||+|+|.....+ ....+ ..++.++++++..
T Consensus 82 ~vDvVf~atp~~~s~~-----~a~~~-~aG~~VId~sa~~ 115 (359)
T 1xyg_A 82 TVDAVFCCLPHGTTQE-----IIKEL-PTALKIVDLSADF 115 (359)
T ss_dssp GCSEEEECCCTTTHHH-----HHHTS-CTTCEEEECSSTT
T ss_pred CCCEEEEcCCchhHHH-----HHHHH-hCCCEEEECCccc
Confidence 8999999998766432 22344 5577777777754
No 455
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=95.67 E-value=0.13 Score=44.92 Aligned_cols=40 Identities=23% Similarity=0.317 Sum_probs=35.2
Q ss_pred CcEEEEE-CCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 5 MKVMGVV-GSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 5 ~~~V~ii-G~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
-++|.|+ |+|.+|...++.+...|.+|++.++++++++.+
T Consensus 151 g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~ 191 (346)
T 3fbg_A 151 GKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWT 191 (346)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHH
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 3689999 689999998888888999999999999887765
No 456
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=95.67 E-value=0.026 Score=46.49 Aligned_cols=40 Identities=28% Similarity=0.253 Sum_probs=34.5
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRAT 45 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~ 45 (297)
++|.|.|+ |.+|..++..|++.|++|++.++++++.+...
T Consensus 8 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~ 48 (248)
T 2pnf_A 8 KVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVA 48 (248)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Confidence 56777776 99999999999999999999999988766553
No 457
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=95.67 E-value=0.028 Score=46.38 Aligned_cols=42 Identities=21% Similarity=0.328 Sum_probs=35.8
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKS 47 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~ 47 (297)
++|.|.|+ |-+|..+|..|++.|++|.+.+++++.++...+.
T Consensus 15 k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~ 57 (247)
T 3i1j_A 15 RVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQ 57 (247)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHH
Confidence 46777777 8999999999999999999999999887766443
No 458
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=95.66 E-value=0.021 Score=47.30 Aligned_cols=39 Identities=26% Similarity=0.279 Sum_probs=34.3
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
++|.|.|+ |.+|..++..|++.|++|++.+++++.++..
T Consensus 12 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~ 51 (255)
T 1fmc_A 12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHV 51 (255)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHH
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 57888877 9999999999999999999999998876554
No 459
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=95.66 E-value=0.027 Score=47.24 Aligned_cols=43 Identities=28% Similarity=0.347 Sum_probs=35.8
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSI 48 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~ 48 (297)
+++.|.|+ |-+|..+|..|++.|++|.+.+++++.++...+.+
T Consensus 11 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l 54 (267)
T 3t4x_A 11 KTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEI 54 (267)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 45666676 88999999999999999999999998877665443
No 460
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=95.66 E-value=0.1 Score=43.08 Aligned_cols=39 Identities=21% Similarity=0.174 Sum_probs=33.7
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
++|.|.|+ |-+|..+|..|++.|++|.+.|++++..+..
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~ 42 (247)
T 3dii_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADF 42 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 46778877 8899999999999999999999998876554
No 461
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=95.66 E-value=0.065 Score=49.74 Aligned_cols=34 Identities=21% Similarity=0.059 Sum_probs=30.2
Q ss_pred CcEEEEECCChhHHH-HHHHHHHCCCcEEEEeCCH
Q 022407 5 MKVMGVVGSGQMGSG-IAQLGVMDGLDVWLVDTDP 38 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~-iA~~l~~~G~~V~~~d~~~ 38 (297)
.++|.|||.|-.|.+ +|..|.+.|++|++.|.+.
T Consensus 19 ~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~ 53 (524)
T 3hn7_A 19 GMHIHILGICGTFMGSLALLARALGHTVTGSDANI 53 (524)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCC
Confidence 478999999999986 7888899999999999864
No 462
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=95.65 E-value=0.029 Score=46.51 Aligned_cols=40 Identities=20% Similarity=0.234 Sum_probs=34.6
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRAT 45 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~ 45 (297)
+++.|.|+ |-+|..+|..|++.|++|.+.++++++++...
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~ 48 (247)
T 2jah_A 8 KVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALG 48 (247)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 56777776 89999999999999999999999988776553
No 463
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=95.65 E-value=0.0044 Score=54.57 Aligned_cols=33 Identities=15% Similarity=0.123 Sum_probs=30.0
Q ss_pred CcEEEEECCChhHHHHHHHHHHCCCcEEEEeCCH
Q 022407 5 MKVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDP 38 (297)
Q Consensus 5 ~~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~ 38 (297)
.+.|.|||+|..|.+.|..|+ .|++|+++|.++
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~ 41 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-AHGRVVVLEREA 41 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSS
T ss_pred cCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCC
Confidence 367999999999999999999 699999999873
No 464
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=95.64 E-value=0.035 Score=46.73 Aligned_cols=40 Identities=18% Similarity=0.141 Sum_probs=34.4
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRAT 45 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~ 45 (297)
++|.|.|+ |-+|..+|..|++.|++|++.+|++++++...
T Consensus 22 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~ 62 (273)
T 1ae1_A 22 TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECL 62 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 56777776 89999999999999999999999988766543
No 465
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=95.63 E-value=0.007 Score=52.88 Aligned_cols=32 Identities=22% Similarity=0.168 Sum_probs=29.9
Q ss_pred cEEEEECCChhHHHHHHHHHHCC------CcEEEEeCC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDG------LDVWLVDTD 37 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G------~~V~~~d~~ 37 (297)
|.|.|||+|..|.+.|..|+++| ++|+++|..
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~ 38 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADR 38 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECC
Confidence 47999999999999999999998 999999986
No 466
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=95.63 E-value=0.029 Score=46.45 Aligned_cols=44 Identities=23% Similarity=0.268 Sum_probs=36.0
Q ss_pred CCCCCcEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 1 MEEKMKVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 1 M~~~~~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
|.-.-+++.|.|+ |-+|..+|..|++.|++|++.+|++++++..
T Consensus 1 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~ 45 (245)
T 1uls_A 1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREA 45 (245)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 4323367888887 8999999999999999999999998776544
No 467
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=95.63 E-value=0.029 Score=46.93 Aligned_cols=39 Identities=33% Similarity=0.385 Sum_probs=34.0
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
++|.|.|+ |.+|..++..|++.|++|++.+|++++.+..
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~ 47 (267)
T 2gdz_A 8 KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQC 47 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 57888887 8999999999999999999999998776544
No 468
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=95.63 E-value=0.02 Score=46.82 Aligned_cols=39 Identities=18% Similarity=0.360 Sum_probs=34.0
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
++|.|.|+ |-+|..+|..|++.|++|.+.+|++++++..
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~ 41 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTV 41 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHH
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 45778887 8899999999999999999999999877665
No 469
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=95.62 E-value=0.074 Score=46.21 Aligned_cols=106 Identities=17% Similarity=0.225 Sum_probs=61.1
Q ss_pred CCcEEEEECCChhHHHHHHHHHHCCCcEEE-EeC--CHHHHHHHHHHHHHHHHHHHHcCCCChhhhccc-------CCce
Q 022407 4 KMKVMGVVGSGQMGSGIAQLGVMDGLDVWL-VDT--DPDALVRATKSISSSIQKFVSKGQLSQAMGTDA-------PRRL 73 (297)
Q Consensus 4 ~~~~V~iiG~G~mG~~iA~~l~~~G~~V~~-~d~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-------~~~i 73 (297)
...||+|.|.|.+|+..++.+...|.+|.. .|+ +.+.+..+ ++.---.|.+... .... -..+
T Consensus 6 ~~~kvgInGFGRIGrlv~R~~~~~~veivainDp~~d~~~~a~l-------~~yDS~hG~f~~~-v~~~~~~l~i~Gk~I 77 (346)
T 3h9e_O 6 RELTVGINGFGRIGRLVLRACMEKGVKVVAVNDPFIDPEYMVYM-------FKYDSTHGRYKGS-VEFRNGQLVVDNHEI 77 (346)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEECTTCCHHHHHHH-------HHCCTTTCSCSSC-EEEETTEEEETTEEE
T ss_pred CeeEEEEECCChHHHHHHHHHHhCCCEEEEEeCCCCChhHhccc-------ccccCCCCCCCCc-EEEcCCEEEECCEEE
Confidence 346899999999999999988888888765 564 44444333 1111123544321 1111 1223
Q ss_pred EEe--cCccccc----CCcEEEEecccCHHHHHHHHHHHHhhccCCe--EEeecCCC
Q 022407 74 RCT--SNLKDLH----SADIIVEAIVESEDVKKKLFSELDKITKASA--ILASNTSS 122 (297)
Q Consensus 74 ~~~--~~~~~~~----~aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~--ii~s~ts~ 122 (297)
++. .+++.+. ++|+|++|....... + ....+++.++ +|++++|.
T Consensus 78 ~v~~e~dp~~i~W~~~gvDiVlesTG~f~s~-e----~a~~hl~aGAkkVVIsaps~ 129 (346)
T 3h9e_O 78 SVYQCKEPKQIPWRAVGSPYVVESTGVYLSI-Q----AASDHISAGAQRVVISAPSP 129 (346)
T ss_dssp EEECCSSGGGCCGGGGTSCEEEECSSSCCSH-H----HHHHHHHTTCSEEEESSCCS
T ss_pred EEEecCChhhCCcccccccEEEEeccccCCH-H----HHHHHHHcCCCEEEECCCCC
Confidence 333 2455555 899999997543321 1 1233444555 88888763
No 470
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=95.62 E-value=0.0082 Score=53.74 Aligned_cols=32 Identities=28% Similarity=0.327 Sum_probs=30.0
Q ss_pred cEEEEECCChhHHHHHHHHHHC--CCcEEEEeCC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMD--GLDVWLVDTD 37 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~--G~~V~~~d~~ 37 (297)
..|.|||+|..|.+.|..|+++ |++|+++|+.
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~ 70 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEG 70 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSS
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCC
Confidence 4699999999999999999999 9999999975
No 471
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=95.60 E-value=0.09 Score=44.24 Aligned_cols=39 Identities=28% Similarity=0.286 Sum_probs=32.7
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
+++.|.|+ |-+|..+|..|++.|++|.+.+++.+.++..
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~ 68 (272)
T 4dyv_A 29 KIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQET 68 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 34555566 8899999999999999999999998877655
No 472
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=95.57 E-value=0.13 Score=43.42 Aligned_cols=44 Identities=20% Similarity=0.283 Sum_probs=35.9
Q ss_pred CCCCCcEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 1 MEEKMKVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 1 M~~~~~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
|.-.-+++.|.|+ |-+|..+|..|++.|++|.+.+++.++++..
T Consensus 1 M~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~ 45 (281)
T 3zv4_A 1 MKLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLREL 45 (281)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHH
Confidence 4333456777776 8899999999999999999999998876654
No 473
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=95.57 E-value=0.039 Score=46.23 Aligned_cols=43 Identities=23% Similarity=0.280 Sum_probs=36.0
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSI 48 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~ 48 (297)
+++.|.|+ |-+|..+|..|++.|++|.+.++++++++...+.+
T Consensus 9 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l 52 (265)
T 3lf2_A 9 AVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESAL 52 (265)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 46677776 88999999999999999999999998877664443
No 474
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=95.57 E-value=0.029 Score=46.81 Aligned_cols=39 Identities=18% Similarity=0.110 Sum_probs=34.0
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
++|.|.|+ |.+|..++..|++.|++|++.++++++++..
T Consensus 15 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~ 54 (266)
T 1xq1_A 15 KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNEC 54 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 56777776 8999999999999999999999998876654
No 475
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=95.55 E-value=0.023 Score=49.56 Aligned_cols=33 Identities=18% Similarity=0.361 Sum_probs=30.4
Q ss_pred cEEEEECCChhHHHHHHHHHHCCC-cEEEEeCCH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGL-DVWLVDTDP 38 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~-~V~~~d~~~ 38 (297)
.+|.|||+|..|+.+|..|+.+|. +++++|.+.
T Consensus 35 ~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 35 TKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 689999999999999999999998 789999864
No 476
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=95.55 E-value=0.034 Score=46.96 Aligned_cols=41 Identities=32% Similarity=0.473 Sum_probs=35.3
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRATK 46 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~ 46 (297)
++|.|.|+ |-+|..+|..|++.|++|.+.+++++.++...+
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~ 53 (281)
T 3svt_A 12 RTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQ 53 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 56777776 899999999999999999999999988776543
No 477
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.55 E-value=0.03 Score=49.03 Aligned_cols=39 Identities=18% Similarity=0.158 Sum_probs=34.0
Q ss_pred cEEEEECCChhHHHHHHHHHHCCC-cEEEEeCCHHHHHHH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGL-DVWLVDTDPDALVRA 44 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~-~V~~~d~~~~~~~~~ 44 (297)
++|.|+|+|.+|...++.+...|. +|+..|+++++++.+
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~ 207 (352)
T 3fpc_A 168 DTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIA 207 (352)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH
Confidence 579999999999988877777898 899999999887765
No 478
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=95.55 E-value=0.012 Score=53.29 Aligned_cols=35 Identities=17% Similarity=0.301 Sum_probs=32.0
Q ss_pred CCcEEEEECCChhHHHHHHHHHHCCC--cEEEEeCCH
Q 022407 4 KMKVMGVVGSGQMGSGIAQLGVMDGL--DVWLVDTDP 38 (297)
Q Consensus 4 ~~~~V~iiG~G~mG~~iA~~l~~~G~--~V~~~d~~~ 38 (297)
...+|+|||+|..|...|..|++.|+ +|+++|+++
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~ 41 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRG 41 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCC
Confidence 45789999999999999999999999 999999863
No 479
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=95.54 E-value=0.032 Score=46.60 Aligned_cols=42 Identities=26% Similarity=0.258 Sum_probs=35.6
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKS 47 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~ 47 (297)
++|.|.|+ |-+|..+|..|++.|++|.+.+++.+.++...+.
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~ 72 (262)
T 3rkr_A 30 QVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVERE 72 (262)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence 56777776 8999999999999999999999999887665433
No 480
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=95.54 E-value=0.008 Score=53.30 Aligned_cols=34 Identities=18% Similarity=0.163 Sum_probs=31.3
Q ss_pred cEEEEECCChhHHHHHHHHHHC--CCcEEEEeCCHH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMD--GLDVWLVDTDPD 39 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~--G~~V~~~d~~~~ 39 (297)
++|.|||+|..|...|..|+++ |++|+++|+++.
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~ 36 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDE 36 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCC
Confidence 4799999999999999999999 999999998754
No 481
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=95.54 E-value=0.062 Score=45.23 Aligned_cols=44 Identities=32% Similarity=0.314 Sum_probs=35.0
Q ss_pred CCCCCcEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 1 MEEKMKVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 1 M~~~~~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
|....++|.|.|+ |-+|..+|..|++.|++|++.+++.+.++..
T Consensus 1 M~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~ 45 (281)
T 3m1a_A 1 MSESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDL 45 (281)
T ss_dssp ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHH
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 5444467777777 8999999999999999999999998876554
No 482
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=95.53 E-value=0.033 Score=47.01 Aligned_cols=39 Identities=26% Similarity=0.327 Sum_probs=34.0
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
++|.|.|+ |-+|..+|..|++.|++|++.+|+++.++..
T Consensus 30 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~ 69 (276)
T 2b4q_A 30 RIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADT 69 (276)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 56778877 8999999999999999999999998876554
No 483
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=95.52 E-value=0.018 Score=49.40 Aligned_cols=91 Identities=14% Similarity=0.100 Sum_probs=57.0
Q ss_pred CcEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccCCceEEecCcccc-
Q 022407 5 MKVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQAMGTDAPRRLRCTSNLKDL- 82 (297)
Q Consensus 5 ~~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~- 82 (297)
..+|.|+|+ |.||..++..+.+.|++ .++..++.+. |. . ...+.+..+++++
T Consensus 13 ~~~vvV~Gasg~~G~~~~~~l~~~g~~-~v~~VnP~~~-----------------g~-------~-i~G~~vy~sl~el~ 66 (297)
T 2yv2_A 13 ETRVLVQGITGREGSFHAKAMLEYGTK-VVAGVTPGKG-----------------GS-------E-VHGVPVYDSVKEAL 66 (297)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECTTCT-----------------TC-------E-ETTEEEESSHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHhCCCc-EEEEeCCCCC-----------------Cc-------e-ECCEeeeCCHHHHh
Confidence 357888899 99999999999988998 6666665421 00 0 1124677777774
Q ss_pred c--C-CcEEEEecccCHHHHHHHHHHHHhhccCCeEEeecCCCccH
Q 022407 83 H--S-ADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSISI 125 (297)
Q Consensus 83 ~--~-aD~Vi~~v~e~~~~k~~~~~~l~~~~~~~~ii~s~ts~~~~ 125 (297)
. . +|++|.++|.... .+++.+..+. .-..+++ -|.+++.
T Consensus 67 ~~~~~~DvaIi~vp~~~~--~~~v~ea~~~-Gi~~vVi-~t~G~~~ 108 (297)
T 2yv2_A 67 AEHPEINTSIVFVPAPFA--PDAVYEAVDA-GIRLVVV-ITEGIPV 108 (297)
T ss_dssp HHCTTCCEEEECCCGGGH--HHHHHHHHHT-TCSEEEE-CCCCCCH
T ss_pred hcCCCCCEEEEecCHHHH--HHHHHHHHHC-CCCEEEE-ECCCCCH
Confidence 3 4 9999999986553 3444444332 1232333 3556654
No 484
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=95.52 E-value=0.0096 Score=55.33 Aligned_cols=36 Identities=22% Similarity=0.290 Sum_probs=32.4
Q ss_pred CCCcEEEEECCChhHHHHHHHHHH------------CCCcEEEEeCCH
Q 022407 3 EKMKVMGVVGSGQMGSGIAQLGVM------------DGLDVWLVDTDP 38 (297)
Q Consensus 3 ~~~~~V~iiG~G~mG~~iA~~l~~------------~G~~V~~~d~~~ 38 (297)
+...+|.|||+|.-|...|..|++ .|++|+++++.+
T Consensus 5 ~~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~ 52 (526)
T 2pyx_A 5 KPITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPD 52 (526)
T ss_dssp SCCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCC
Confidence 456789999999999999999999 999999999753
No 485
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=95.52 E-value=0.029 Score=46.93 Aligned_cols=39 Identities=26% Similarity=0.186 Sum_probs=33.9
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
++|.|.|+ |-+|..+|..|++.|++|++.+|++++.+..
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~ 47 (260)
T 1nff_A 8 KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAM 47 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 56778876 8999999999999999999999998776554
No 486
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=95.52 E-value=0.18 Score=41.94 Aligned_cols=39 Identities=26% Similarity=0.199 Sum_probs=33.8
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
++|.|.|+ |-+|..+|..|++.|++|++.++++++++..
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~ 52 (263)
T 3ak4_A 13 RKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAV 52 (263)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 57878877 8999999999999999999999998766543
No 487
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.51 E-value=0.21 Score=43.80 Aligned_cols=39 Identities=23% Similarity=0.247 Sum_probs=35.1
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
++|.|+|+|.+|...++.+...|.+|++.++++++++.+
T Consensus 191 ~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~ 229 (363)
T 3uog_A 191 DRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRA 229 (363)
T ss_dssp CEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHH
Confidence 689999999999988888888999999999999887765
No 488
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=95.51 E-value=0.042 Score=46.01 Aligned_cols=41 Identities=22% Similarity=0.336 Sum_probs=34.9
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRATK 46 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~ 46 (297)
++|.|.|+ |-+|..+|..|++.|++|++.+|++++++...+
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 55 (267)
T 1iy8_A 14 RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKA 55 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 56777776 899999999999999999999999887765543
No 489
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=95.51 E-value=0.011 Score=52.18 Aligned_cols=34 Identities=26% Similarity=0.304 Sum_probs=31.4
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCHH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDPD 39 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~~ 39 (297)
.+|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 12 ~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~ 45 (379)
T 3alj_A 12 RRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSE 45 (379)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 5799999999999999999999999999998653
No 490
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=95.49 E-value=0.037 Score=45.50 Aligned_cols=39 Identities=23% Similarity=0.204 Sum_probs=34.5
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
++|.|.|+ |.+|..++..|++.|++|++.++++++++..
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~ 47 (244)
T 3d3w_A 8 RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSL 47 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 57888888 8999999999999999999999998776544
No 491
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=95.49 E-value=0.17 Score=42.74 Aligned_cols=42 Identities=31% Similarity=0.425 Sum_probs=35.0
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKS 47 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~ 47 (297)
+++.|.|+ |-+|..+|..|++.|++|.+.+++++.++...+.
T Consensus 34 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~ 76 (281)
T 4dry_A 34 RIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGE 76 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence 45666676 8899999999999999999999999887766443
No 492
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=95.49 E-value=0.0084 Score=51.78 Aligned_cols=31 Identities=23% Similarity=0.263 Sum_probs=29.7
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDT 36 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~ 36 (297)
.+|.|||+|..|...|..|++.|++|+++|.
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~ 39 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAARAELKPLLFEG 39 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEECC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEec
Confidence 5799999999999999999999999999997
No 493
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=95.49 E-value=0.028 Score=46.86 Aligned_cols=39 Identities=28% Similarity=0.291 Sum_probs=33.6
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
++|.|.|+ |-+|..+|..|++.|++|++.+|++++++..
T Consensus 15 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~ 54 (260)
T 2zat_A 15 KVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRT 54 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 46777776 8999999999999999999999998876654
No 494
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=95.48 E-value=0.16 Score=42.80 Aligned_cols=41 Identities=22% Similarity=0.217 Sum_probs=35.0
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRATK 46 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~ 46 (297)
+++.|.|+ |-+|..+|..|++.|++|++.+++++.++...+
T Consensus 33 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~ 74 (276)
T 3r1i_A 33 KRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVAD 74 (276)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 56777776 889999999999999999999999887766543
No 495
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=95.47 E-value=0.034 Score=45.82 Aligned_cols=39 Identities=26% Similarity=0.235 Sum_probs=34.2
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRA 44 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~ 44 (297)
++|.|.|+ |.+|..++..|++.|++|++.+++++.++..
T Consensus 3 k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~ 42 (250)
T 2cfc_A 3 RVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEET 42 (250)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 46888877 8999999999999999999999998776554
No 496
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=95.46 E-value=0.046 Score=50.73 Aligned_cols=33 Identities=15% Similarity=0.299 Sum_probs=30.5
Q ss_pred cEEEEECCChhHHHHHHHHHHCCC-cEEEEeCCH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGL-DVWLVDTDP 38 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~-~V~~~d~~~ 38 (297)
.+|.|||+|.+|+.+|.+|+.+|. +++++|.+.
T Consensus 33 ~~VlvvG~GGlGseiak~La~aGVg~itlvD~D~ 66 (531)
T 1tt5_A 33 AHVCLINATATGTEILKNLVLPGIGSFTIIDGNQ 66 (531)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECCCB
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 589999999999999999999998 799999764
No 497
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=95.46 E-value=0.044 Score=47.36 Aligned_cols=43 Identities=21% Similarity=0.341 Sum_probs=37.2
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRATKSI 48 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~ 48 (297)
++|.|.|+ |-+|..+|..|++.|++|++.+|+.++++...+.+
T Consensus 9 k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l 52 (319)
T 3ioy_A 9 RTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATL 52 (319)
T ss_dssp CEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 57888887 89999999999999999999999998887765443
No 498
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=95.45 E-value=0.015 Score=49.10 Aligned_cols=32 Identities=19% Similarity=0.106 Sum_probs=30.1
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCC
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTD 37 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~ 37 (297)
.+|.|||+|.-|...|..|++.|++|+++|.+
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 34 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAG 34 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCC
Confidence 58999999999999999999999999999964
No 499
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=95.45 E-value=0.0088 Score=55.36 Aligned_cols=33 Identities=30% Similarity=0.433 Sum_probs=31.0
Q ss_pred cEEEEECCChhHHHHHHHHHHCCCcEEEEeCCH
Q 022407 6 KVMGVVGSGQMGSGIAQLGVMDGLDVWLVDTDP 38 (297)
Q Consensus 6 ~~V~iiG~G~mG~~iA~~l~~~G~~V~~~d~~~ 38 (297)
.+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~ 40 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLEREA 40 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEccCC
Confidence 479999999999999999999999999999875
No 500
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=95.45 E-value=0.032 Score=47.02 Aligned_cols=40 Identities=25% Similarity=0.306 Sum_probs=34.0
Q ss_pred cEEEEECC-ChhHHHHHHHHHHCCCcEEEEeCCHHHHHHHH
Q 022407 6 KVMGVVGS-GQMGSGIAQLGVMDGLDVWLVDTDPDALVRAT 45 (297)
Q Consensus 6 ~~V~iiG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~ 45 (297)
++|.|.|+ |-+|..+|..|++.|++|++.+|++++++...
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~ 47 (278)
T 1spx_A 7 KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETR 47 (278)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 45666676 89999999999999999999999988776553
Done!