Your job contains 1 sequence.
>022409
MESLALPCLNSFTSSRASFHKEQSNKLLAKARYLNSSKPASLRLTPYYIAPSFNLGGIRM
QAGGEEYELKQMRDMAAAKKRWDALIRDGKVKVLTPREAGYAVQLSSKTLLDVRPSTERK
KAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTLSYNKQFLSKVEEKLPKD
TDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLEAAEEEDLVREGPQPLKFAGIGGLS
EFLGYTSQLCYPFLHISYPSTSFSKMTYVIIHAMDSLYVGNLRNWWNILEIIKDIEE
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 022409
(297 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2121994 - symbol:AT4G24750 "AT4G24750" species... 850 6.2e-85 1
TAIR|locus:2097628 - symbol:AT3G08920 "AT3G08920" species... 279 2.0e-24 1
TAIR|locus:2059999 - symbol:AT2G42220 "AT2G42220" species... 205 1.4e-16 1
TAIR|locus:2137792 - symbol:AT4G27700 "AT4G27700" species... 129 2.8e-06 1
UNIPROTKB|Q3AEL0 - symbol:CHY_0566 "Rhodanese-like domain... 90 1.8e-05 2
TIGR_CMR|CHY_0566 - symbol:CHY_0566 "rhodanese-like domai... 90 1.8e-05 2
UNIPROTKB|Q604K3 - symbol:MCA2536 "Rhodanese domain prote... 85 6.4e-05 2
>TAIR|locus:2121994 [details] [associations]
symbol:AT4G24750 "AT4G24750" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0006399 "tRNA metabolic process" evidence=RCA] [GO:0009658
"chloroplast organization" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0045036 "protein targeting to chloroplast"
evidence=RCA] PROSITE:PS00380 PROSITE:PS00683 Pfam:PF00581
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:3.40.250.10 InterPro:IPR001763 SMART:SM00450 SUPFAM:SSF52821
PROSITE:PS50206 EMBL:AL035356 EMBL:AL161562 EMBL:AK226250
EMBL:BT030055 EMBL:BT021999 IPI:IPI00528259 PIR:T05559
RefSeq:NP_194206.2 UniGene:At.32320 ProteinModelPortal:Q0WWT7
SMR:Q0WWT7 STRING:Q0WWT7 PaxDb:Q0WWT7 PRIDE:Q0WWT7
EnsemblPlants:AT4G24750.1 GeneID:828577 KEGG:ath:AT4G24750
TAIR:At4g24750 HOGENOM:HOG000005915 InParanoid:Q0WWT7 OMA:MGGWWSG
PhylomeDB:Q0WWT7 ProtClustDB:CLSN2681618 Genevestigator:Q0WWT7
Uniprot:Q0WWT7
Length = 292
Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
Identities = 167/281 (59%), Positives = 210/281 (74%)
Query: 1 MESLALPCLNSFTSSRASFHKEQSNKLLAKARYLNSSKPASLRLTPYYIAPSFNLGGIRM 60
MESL+LP LN +S ++ + Q +++ + + SS + + T F +G +RM
Sbjct: 1 MESLSLPVLNPLLASGSNLFRNQHSRMTSS---MVSSLKSPIGGTSLSTVRRFGVGVVRM 57
Query: 61 QAGGEEYELKQMRDMAAAKKRWDALIRDGKVKVLTPREAGYAVQLSSKTLLDVRPSTERK 120
QA E+ +LKQMRD+AAAKKRWD L+R+GKVK+LTPREAGYA+ LS+K LLDVRPS+ER
Sbjct: 58 QAVDEDIDLKQMRDIAAAKKRWDGLLREGKVKLLTPREAGYAISLSNKPLLDVRPSSERN 117
Query: 121 KAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTLSYNKQFLSKVEEKLPKD 180
KAWIKGS W+PIFD DD DAG+L +KVT+F MGGWWSG PTLS+N+ FLSKVEEK PKD
Sbjct: 118 KAWIKGSTWVPIFDNDDNLDAGTLSKKVTSFAMGGWWSGAPTLSFNRLFLSKVEEKFPKD 177
Query: 181 TDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLEAAEEEDLVREGPQPLKFAGIGGLS 240
++LIVACQKGLRSLAACELLYNAGY NLFWVQGGLE+A++EDLV EG QPLK AGIGG S
Sbjct: 178 SELIVACQKGLRSLAACELLYNAGYENLFWVQGGLESAQDEDLVTEGVQPLKLAGIGGFS 237
Query: 241 EFLGYTSQLCYPFLHISYP-STSFSKMTYVIIHAMDSLYVG 280
EFLG+T Q + ++ + ++ A D+L+VG
Sbjct: 238 EFLGWTDQQRAQAAKEGWGYRLVYTARLFGVVLAADALFVG 278
>TAIR|locus:2097628 [details] [associations]
symbol:AT3G08920 "AT3G08920" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] PROSITE:PS00380
PROSITE:PS00683 Pfam:PF00581 GO:GO:0016021 EMBL:CP002686
GO:GO:0009941 Gene3D:3.40.250.10 InterPro:IPR001763 SMART:SM00450
SUPFAM:SSF52821 PROSITE:PS50206 EMBL:AC010871 GO:GO:0009534
EMBL:AY074549 EMBL:BT002325 EMBL:AY087039 IPI:IPI00530552
RefSeq:NP_566337.1 UniGene:At.43722 ProteinModelPortal:Q9SR92
SMR:Q9SR92 STRING:Q9SR92 PRIDE:Q9SR92 EnsemblPlants:AT3G08920.1
GeneID:820041 KEGG:ath:AT3G08920 TAIR:At3g08920
HOGENOM:HOG000239976 InParanoid:Q9SR92 OMA:WLAGGFN PhylomeDB:Q9SR92
ProtClustDB:CLSN2688183 Genevestigator:Q9SR92 Uniprot:Q9SR92
Length = 214
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 66/163 (40%), Positives = 97/163 (59%)
Query: 85 LIRDGKVKVLTPREAGYAVQLSSKTLLDVRPSTERKKAWIKGSIWIPIFDIDDTFDAG-- 142
LI GKV+ + P+EA V LLDVRP+ ER+KA +KGS+ +P+F ++D D G
Sbjct: 39 LILSGKVRAVEPKEANAVVASEGYILLDVRPAWEREKARVKGSLHVPLF-VEDP-DNGPI 96
Query: 143 SLPQKVTNFVMGGWWSGVPTLSYNKQFLSKVEEKLP-KDTDLIVACQKGLRSLAACELLY 201
+L +K + G W+G N +F +V E +P K++ ++V C +GLRSLAA L+
Sbjct: 97 TLLKKWIHLGYIGLWTGQRFTMINDEFALRVVEAVPDKESKVLVVCGEGLRSLAAVSKLH 156
Query: 202 NAGYRNLFWVQGGLEAAEEEDLVR-EGPQPLKFAGIGGLSEFL 243
GY++L W+ GG E D EG + L+FA IGG+S +L
Sbjct: 157 GEGYKSLGWLTGGFNRVSEGDFPEIEGTEELRFATIGGVSFYL 199
>TAIR|locus:2059999 [details] [associations]
symbol:AT2G42220 "AT2G42220" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
[GO:0019344 "cysteine biosynthetic process" evidence=RCA]
[GO:0019684 "photosynthesis, light reaction" evidence=RCA]
PROSITE:PS00380 PROSITE:PS00683 Pfam:PF00581 GO:GO:0016021
EMBL:CP002685 GenomeReviews:CT485783_GR Gene3D:3.40.250.10
InterPro:IPR001763 SMART:SM00450 SUPFAM:SSF52821 PROSITE:PS50206
EMBL:AC002561 GO:GO:0009535 EMBL:AY045616 IPI:IPI00520188
PIR:T00931 RefSeq:NP_565969.1 UniGene:At.12443 UniGene:At.48581
ProteinModelPortal:O48529 SMR:O48529 STRING:O48529 PaxDb:O48529
PRIDE:O48529 EnsemblPlants:AT2G42220.1 GeneID:818822
KEGG:ath:AT2G42220 TAIR:At2g42220 HOGENOM:HOG000243044
InParanoid:O48529 OMA:VCAYLFI PhylomeDB:O48529
ProtClustDB:CLSN2688883 Genevestigator:O48529 Uniprot:O48529
Length = 234
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 50/169 (29%), Positives = 84/169 (49%)
Query: 90 KVKVLTPREAGYAVQLSSKTLLDVRPSTERKKAWIKGSIWIPIFDIDDTFDAGSLPQKVT 149
++K + EA + +++DVR T+ ++A IK IP+F ++ D G++ ++
Sbjct: 48 ELKFVNAEEAKQLIAEEGYSVVDVRDKTQFERAHIKSCSHIPLFIYNEDNDIGTIIKRTV 107
Query: 150 NFVMGGWWSGVPTLSYNKQFLSKVEEKLPKDTDLIVACQKGLRSLAACELLYNAGYRNLF 209
+ G + G+P N +FL V + +D+ L++ CQ+GLRS AA L AGY N+
Sbjct: 108 HNNFSGLFFGLPFTKVNPEFLKSVRNEFSQDSKLLLVCQEGLRSAAAASRLEEAGYENIA 167
Query: 210 WVQGGLEAAEEEDLVREGPQPLKFAGIGGLSEFLGYTSQLCYPFLHISY 258
V GL++ + G L+ AG GL G S + L +Y
Sbjct: 168 CVTSGLQSVKPGTFESVGSTELQNAGKAGLITIQGKISAVLGTVLVCAY 216
>TAIR|locus:2137792 [details] [associations]
symbol:AT4G27700 "AT4G27700" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0007568
"aging" evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
[GO:0009534 "chloroplast thylakoid" evidence=IDA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0000023 "maltose metabolic
process" evidence=RCA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0019252 "starch biosynthetic process"
evidence=RCA] [GO:0043085 "positive regulation of catalytic
activity" evidence=RCA] PROSITE:PS00380 PROSITE:PS00683
Pfam:PF00581 EMBL:CP002687 GO:GO:0009941 EMBL:AL161571
Gene3D:3.40.250.10 InterPro:IPR001763 SMART:SM00450 SUPFAM:SSF52821
PROSITE:PS50206 GO:GO:0009535 EMBL:AL035602 EMBL:AY050336
EMBL:AY094039 EMBL:AY085226 IPI:IPI00537687 PIR:T05875
RefSeq:NP_567785.1 UniGene:At.24242 UniGene:At.32074
UniGene:At.70640 HSSP:P31142 ProteinModelPortal:Q94A65 SMR:Q94A65
STRING:Q94A65 PRIDE:Q94A65 EnsemblPlants:AT4G27700.1 GeneID:828884
KEGG:ath:AT4G27700 TAIR:At4g27700 HOGENOM:HOG000006311
InParanoid:Q94A65 OMA:NNFVILD PhylomeDB:Q94A65
ProtClustDB:CLSN2917625 Genevestigator:Q94A65 Uniprot:Q94A65
Length = 224
Score = 129 (50.5 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 43/153 (28%), Positives = 74/153 (48%)
Query: 85 LIRDGKVKVLTPREAGYAVQLSSKTLLDVRPSTERKKAWIKGSIWIPIFDIDDTFDAGSL 144
L+ + +V+ + +EA + ++ +LDVRP E K G+I + ++ + + A +
Sbjct: 68 LLLEKRVRSVDVKEAQRLQKENNFVILDVRPEAEYKAGHPPGAINVEMYRLIREWTAWDI 127
Query: 145 PQKVTNFVMGGWWSGVPTLSYNKQFLSKVEEKLPKDTDLIVACQKG-------------- 190
+++ F G +SG N +F+ VE KL K+ +IVAC
Sbjct: 128 ARRL-GFAFFGIFSGTEE---NPEFIQSVEAKLDKEAKIIVACSSAGTMKPTQNLPEGQQ 183
Query: 191 LRSLAACELLYNAGYRNLFWVQGGLEAAEEEDL 223
RSL A LL GY+N+F ++GG+ +E L
Sbjct: 184 SRSLIAAYLLVLNGYKNVFHLEGGIYTWGKEGL 216
>UNIPROTKB|Q3AEL0 [details] [associations]
symbol:CHY_0566 "Rhodanese-like domain protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00581 EMBL:CP000141
GenomeReviews:CP000141_GR Gene3D:3.40.250.10 InterPro:IPR001763
SMART:SM00450 SUPFAM:SSF52821 PROSITE:PS50206 eggNOG:COG0607
HOGENOM:HOG000247776 RefSeq:YP_359424.1 ProteinModelPortal:Q3AEL0
STRING:Q3AEL0 GeneID:3727246 KEGG:chy:CHY_0566 PATRIC:21274275
OMA:YCAVGSR BioCyc:CHYD246194:GJCN-567-MONOMER Uniprot:Q3AEL0
Length = 126
Score = 90 (36.7 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 15/49 (30%), Positives = 35/49 (71%)
Query: 170 LSKVEEKLP---KDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGL 215
+ +VE++LP K+ +++V C+ G RS + ++L + GY++++ ++GG+
Sbjct: 69 MGEVEQQLPNIDKEQEILVVCETGSRSASIAQMLVSKGYKHVYNLKGGI 117
Score = 46 (21.3 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 92 KVLTPREAGYAVQLSSKTLL-DVRPSTERKKAWIKGSIWIPIFDID 136
K L P EA + + L+ DVR E +A I GS IP+ +++
Sbjct: 28 KDLEPDEAKKLIDENPMLLIMDVREPYEYAEARIPGSHNIPMGEVE 73
>TIGR_CMR|CHY_0566 [details] [associations]
symbol:CHY_0566 "rhodanese-like domain protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00581 EMBL:CP000141
GenomeReviews:CP000141_GR Gene3D:3.40.250.10 InterPro:IPR001763
SMART:SM00450 SUPFAM:SSF52821 PROSITE:PS50206 eggNOG:COG0607
HOGENOM:HOG000247776 RefSeq:YP_359424.1 ProteinModelPortal:Q3AEL0
STRING:Q3AEL0 GeneID:3727246 KEGG:chy:CHY_0566 PATRIC:21274275
OMA:YCAVGSR BioCyc:CHYD246194:GJCN-567-MONOMER Uniprot:Q3AEL0
Length = 126
Score = 90 (36.7 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 15/49 (30%), Positives = 35/49 (71%)
Query: 170 LSKVEEKLP---KDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGL 215
+ +VE++LP K+ +++V C+ G RS + ++L + GY++++ ++GG+
Sbjct: 69 MGEVEQQLPNIDKEQEILVVCETGSRSASIAQMLVSKGYKHVYNLKGGI 117
Score = 46 (21.3 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 92 KVLTPREAGYAVQLSSKTLL-DVRPSTERKKAWIKGSIWIPIFDID 136
K L P EA + + L+ DVR E +A I GS IP+ +++
Sbjct: 28 KDLEPDEAKKLIDENPMLLIMDVREPYEYAEARIPGSHNIPMGEVE 73
>UNIPROTKB|Q604K3 [details] [associations]
symbol:MCA2536 "Rhodanese domain protein" species:243233
"Methylococcus capsulatus str. Bath" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00581 Gene3D:3.40.250.10 InterPro:IPR001763
SMART:SM00450 SUPFAM:SSF52821 PROSITE:PS50206 EMBL:AE017282
GenomeReviews:AE017282_GR HOGENOM:HOG000247776 RefSeq:YP_114947.1
ProteinModelPortal:Q604K3 GeneID:3104758 KEGG:mca:MCA2536
PATRIC:22608938 OMA:KFFADYN Uniprot:Q604K3
Length = 145
Score = 85 (35.0 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 170 LSKVEEKLP-----KDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLEA 217
L K+EE+ K+ +IV CQ+G RS +AC+ L G+ ++ ++GG+ A
Sbjct: 78 LGKLEERASEIAQYKEKPVIVTCQQGTRSPSACKTLTKQGFSRIYEMRGGMLA 130
Score = 62 (26.9 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 83 DALIRDGKVKVLTPREAGYAVQL--SSKTLL-DVRPSTERKKAWIKGSIWIPIFDIDD 137
++L R K KVLTP AG AVQL + TL+ DVR E + I+G+ IP+ +++
Sbjct: 31 ESLFR--KHKVLTP--AG-AVQLMNTEDTLVVDVREPAEFAEGHIEGAYHIPLGKLEE 83
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.410 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 297 297 0.00093 115 3 11 22 0.39 34
33 0.44 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 7
No. of states in DFA: 612 (65 KB)
Total size of DFA: 220 KB (2121 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.61u 0.18s 22.79t Elapsed: 00:00:01
Total cpu time: 22.61u 0.18s 22.79t Elapsed: 00:00:01
Start: Thu May 9 21:12:25 2013 End: Thu May 9 21:12:26 2013