Query 022409
Match_columns 297
No_of_seqs 251 out of 1929
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 05:01:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022409.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022409hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwh_A Rhodanese-like domain p 99.9 4.2E-26 1.5E-30 181.5 9.7 101 91-227 1-102 (103)
2 3foj_A Uncharacterized protein 99.9 8.6E-26 2.9E-30 177.3 9.0 99 91-225 1-100 (100)
3 3eme_A Rhodanese-like domain p 99.9 1.4E-25 4.8E-30 176.7 9.8 101 91-227 1-102 (103)
4 1tq1_A AT5G66040, senescence-a 99.9 1.3E-24 4.4E-29 178.4 9.8 114 89-226 15-128 (129)
5 3gk5_A Uncharacterized rhodane 99.9 6.7E-25 2.3E-29 175.0 7.7 100 90-227 2-101 (108)
6 1gmx_A GLPE protein; transfera 99.9 5.7E-25 1.9E-29 174.7 6.5 101 90-226 3-103 (108)
7 1qxn_A SUD, sulfide dehydrogen 99.9 4.9E-24 1.7E-28 177.0 10.6 106 89-227 20-129 (137)
8 3d1p_A Putative thiosulfate su 99.9 1.3E-23 4.4E-28 173.8 11.8 115 89-226 20-137 (139)
9 2hhg_A Hypothetical protein RP 99.9 5.4E-24 1.9E-28 175.6 8.9 112 89-227 19-133 (139)
10 1wv9_A Rhodanese homolog TT165 99.9 6.7E-24 2.3E-28 164.6 4.2 94 91-222 1-94 (94)
11 3hix_A ALR3790 protein; rhodan 99.9 3.6E-23 1.2E-27 164.2 8.4 96 98-227 2-99 (106)
12 3g5j_A Putative ATP/GTP bindin 99.9 1.1E-24 3.9E-29 177.3 -0.4 126 90-222 3-131 (134)
13 3nhv_A BH2092 protein; alpha-b 99.9 8.4E-23 2.9E-27 171.1 10.1 101 92-228 16-121 (144)
14 3ilm_A ALR3790 protein; rhodan 99.9 2.7E-23 9.3E-28 173.6 6.9 100 94-227 2-103 (141)
15 3flh_A Uncharacterized protein 99.9 4.9E-23 1.7E-27 167.8 5.9 102 90-227 13-119 (124)
16 2fsx_A RV0390, COG0607: rhodan 99.9 2.1E-22 7.2E-27 168.7 8.4 109 90-224 3-124 (148)
17 1t3k_A Arath CDC25, dual-speci 99.9 2.4E-22 8.2E-27 169.7 8.3 108 89-227 25-141 (152)
18 2k0z_A Uncharacterized protein 99.9 5.9E-23 2E-27 164.0 2.9 98 92-227 5-102 (110)
19 1vee_A Proline-rich protein fa 99.9 7.8E-22 2.7E-26 162.7 8.2 109 90-227 3-124 (134)
20 3i2v_A Adenylyltransferase and 99.9 3.4E-22 1.2E-26 161.5 5.9 113 92-224 1-122 (127)
21 4f67_A UPF0176 protein LPG2838 99.8 7.7E-22 2.6E-26 181.6 7.2 135 48-223 90-224 (265)
22 1e0c_A Rhodanese, sulfurtransf 99.8 1.3E-20 4.5E-25 171.4 13.1 119 91-227 8-129 (271)
23 1e0c_A Rhodanese, sulfurtransf 99.8 2.8E-20 9.7E-25 169.2 11.7 114 92-226 147-270 (271)
24 1urh_A 3-mercaptopyruvate sulf 99.8 4.7E-20 1.6E-24 168.7 12.9 119 91-227 3-134 (280)
25 2jtq_A Phage shock protein E; 99.8 2.1E-21 7.3E-26 147.6 1.7 80 107-220 1-80 (85)
26 2j6p_A SB(V)-AS(V) reductase; 99.8 4.1E-20 1.4E-24 155.8 9.4 121 90-241 3-134 (152)
27 3hzu_A Thiosulfate sulfurtrans 99.8 9.5E-20 3.2E-24 170.8 11.1 117 91-227 39-159 (318)
28 1c25_A CDC25A; hydrolase, cell 99.8 2.8E-20 9.6E-25 157.3 6.4 109 89-227 20-147 (161)
29 1urh_A 3-mercaptopyruvate sulf 99.8 8E-20 2.7E-24 167.1 8.9 111 93-226 153-277 (280)
30 1rhs_A Sulfur-substituted rhod 99.8 1.8E-19 6.2E-24 166.5 11.3 114 92-227 160-288 (296)
31 3aay_A Putative thiosulfate su 99.8 2.9E-19 9.9E-24 163.0 11.5 116 92-227 6-125 (277)
32 3olh_A MST, 3-mercaptopyruvate 99.8 1.2E-19 4.3E-24 168.8 9.3 112 93-225 176-299 (302)
33 2ouc_A Dual specificity protei 99.8 7.3E-20 2.5E-24 149.9 6.8 112 92-226 1-137 (142)
34 2vsw_A Dual specificity protei 99.8 5.3E-20 1.8E-24 154.2 5.5 116 91-226 3-132 (153)
35 1rhs_A Sulfur-substituted rhod 99.8 8E-19 2.7E-23 162.2 13.7 119 91-227 7-142 (296)
36 2a2k_A M-phase inducer phospha 99.8 3.8E-19 1.3E-23 152.5 10.5 107 89-226 21-148 (175)
37 1qb0_A Protein (M-phase induce 99.8 6E-19 2.1E-23 156.4 11.4 108 89-227 41-169 (211)
38 3op3_A M-phase inducer phospha 99.8 2.6E-19 8.7E-24 160.1 9.0 106 89-225 54-180 (216)
39 3olh_A MST, 3-mercaptopyruvate 99.8 1.4E-18 4.9E-23 161.6 13.9 120 90-227 20-157 (302)
40 1uar_A Rhodanese; sulfurtransf 99.8 6E-19 2E-23 161.6 11.0 113 93-227 147-282 (285)
41 3tp9_A Beta-lactamase and rhod 99.8 3.9E-19 1.3E-23 174.2 8.9 103 89-226 371-473 (474)
42 1uar_A Rhodanese; sulfurtransf 99.8 3.7E-19 1.3E-23 162.9 7.9 117 91-227 7-127 (285)
43 3hzu_A Thiosulfate sulfurtrans 99.8 1.3E-18 4.3E-23 163.2 10.1 111 93-227 180-308 (318)
44 3aay_A Putative thiosulfate su 99.8 1.5E-18 5.2E-23 158.2 9.9 109 94-226 146-274 (277)
45 3f4a_A Uncharacterized protein 99.7 4.8E-19 1.7E-23 152.3 5.0 113 89-226 28-157 (169)
46 2eg4_A Probable thiosulfate su 99.7 3.1E-18 1.1E-22 152.6 10.0 99 92-226 121-229 (230)
47 3tg1_B Dual specificity protei 99.7 4.7E-18 1.6E-22 143.7 9.2 117 89-222 8-143 (158)
48 1hzm_A Dual specificity protei 99.7 6E-19 2E-23 147.5 3.0 117 89-221 13-142 (154)
49 2wlr_A Putative thiosulfate su 99.7 1.2E-17 4E-22 161.9 12.5 120 93-227 273-406 (423)
50 1yt8_A Thiosulfate sulfurtrans 99.7 2.8E-18 9.5E-23 171.4 8.3 104 90-227 5-110 (539)
51 3ntd_A FAD-dependent pyridine 99.7 2.9E-18 9.9E-23 170.1 7.7 97 88-222 469-565 (565)
52 1okg_A Possible 3-mercaptopyru 99.7 1.1E-17 3.8E-22 160.4 11.4 118 91-227 13-143 (373)
53 1yt8_A Thiosulfate sulfurtrans 99.7 3.5E-18 1.2E-22 170.6 8.0 104 89-227 374-477 (539)
54 1whb_A KIAA0055; deubiqutinati 99.7 1E-17 3.5E-22 141.6 8.2 119 89-226 12-145 (157)
55 3ics_A Coenzyme A-disulfide re 99.7 6.1E-18 2.1E-22 169.2 7.7 99 86-221 483-581 (588)
56 2gwf_A Ubiquitin carboxyl-term 99.7 1.1E-17 3.8E-22 141.8 7.2 119 89-226 17-150 (157)
57 2wlr_A Putative thiosulfate su 99.7 3.7E-17 1.3E-21 158.4 10.2 116 92-227 124-250 (423)
58 1okg_A Possible 3-mercaptopyru 99.6 1E-16 3.6E-21 153.6 6.9 101 105-226 172-293 (373)
59 3r2u_A Metallo-beta-lactamase 99.6 1.8E-17 6E-22 162.8 0.0 87 99-220 379-465 (466)
60 2eg4_A Probable thiosulfate su 99.6 3.5E-16 1.2E-20 139.3 7.8 96 105-226 4-102 (230)
61 3utn_X Thiosulfate sulfurtrans 99.5 1.5E-14 5E-19 136.7 9.8 116 93-224 185-319 (327)
62 3tp9_A Beta-lactamase and rhod 99.5 1.3E-14 4.3E-19 142.1 6.7 103 88-226 269-371 (474)
63 3utn_X Thiosulfate sulfurtrans 99.5 1.2E-13 4.2E-18 130.3 12.6 119 90-227 26-160 (327)
64 3r2u_A Metallo-beta-lactamase 99.1 6.4E-11 2.2E-15 116.1 6.9 80 106-219 295-375 (466)
65 2f46_A Hypothetical protein; s 98.0 9E-06 3.1E-10 67.9 5.6 84 95-205 31-128 (156)
66 4erc_A Dual specificity protei 95.5 0.037 1.3E-06 44.4 7.2 76 108-206 37-117 (150)
67 2img_A Dual specificity protei 94.3 0.094 3.2E-06 41.8 6.6 76 108-206 38-118 (151)
68 3rgo_A Protein-tyrosine phosph 94.1 0.1 3.5E-06 42.0 6.4 39 168-206 77-118 (157)
69 2nt2_A Protein phosphatase sli 93.6 0.15 5E-06 41.0 6.5 28 179-206 80-110 (145)
70 2hcm_A Dual specificity protei 93.5 0.13 4.4E-06 42.3 6.0 29 178-206 87-118 (164)
71 3ezz_A Dual specificity protei 92.4 0.28 9.7E-06 39.1 6.5 29 178-206 79-110 (144)
72 2r0b_A Serine/threonine/tyrosi 92.3 0.36 1.2E-05 38.9 7.1 28 179-206 89-119 (154)
73 1wrm_A Dual specificity phosph 92.0 0.29 9.9E-06 40.3 6.2 29 178-206 81-112 (165)
74 1yz4_A DUSP15, dual specificit 91.8 0.33 1.1E-05 39.6 6.4 28 179-206 83-113 (160)
75 1v8c_A MOAD related protein; r 91.6 0.025 8.4E-07 48.1 -0.8 28 108-139 122-149 (168)
76 3s4e_A Dual specificity protei 91.5 0.39 1.3E-05 38.4 6.4 29 178-206 79-110 (144)
77 3f81_A Dual specificity protei 91.4 0.39 1.3E-05 39.9 6.5 27 180-206 115-144 (183)
78 2esb_A Dual specificity protei 90.9 0.49 1.7E-05 39.9 6.7 29 178-206 95-126 (188)
79 2e0t_A Dual specificity phosph 90.7 0.3 1E-05 39.3 4.9 28 179-206 84-114 (151)
80 1fpz_A Cyclin-dependent kinase 90.5 0.5 1.7E-05 40.5 6.5 39 167-205 120-162 (212)
81 2wgp_A Dual specificity protei 90.3 0.53 1.8E-05 39.8 6.4 28 179-206 102-132 (190)
82 2g6z_A Dual specificity protei 89.6 0.68 2.3E-05 40.3 6.6 28 178-205 81-111 (211)
83 2j16_A SDP-1, tyrosine-protein 88.4 0.9 3.1E-05 38.5 6.4 29 178-206 115-146 (182)
84 1xri_A AT1G05000; structural g 88.1 0.86 2.9E-05 36.5 5.9 27 179-205 91-119 (151)
85 1ywf_A Phosphotyrosine protein 87.9 0.24 8.2E-06 45.4 2.6 54 82-135 44-103 (296)
86 2pq5_A Dual specificity protei 87.5 1.6 5.4E-05 37.3 7.5 28 179-206 130-160 (205)
87 3emu_A Leucine rich repeat and 87.0 0.89 3.1E-05 37.3 5.4 29 178-206 85-116 (161)
88 3s4o_A Protein tyrosine phosph 85.9 1.3 4.5E-05 35.5 5.9 28 179-206 108-138 (167)
89 2y96_A Dual specificity phosph 85.9 2.5 8.6E-05 36.6 8.0 29 178-206 137-168 (219)
90 2q05_A Late protein H1, dual s 85.7 1.3 4.6E-05 37.5 6.0 28 179-206 124-154 (195)
91 3rz2_A Protein tyrosine phosph 85.1 2.6 8.9E-05 35.2 7.5 39 167-205 102-144 (189)
92 3cm3_A Late protein H1, dual s 81.0 2.8 9.7E-05 34.5 6.0 28 179-206 107-137 (176)
93 1yn9_A BVP, polynucleotide 5'- 80.1 2.4 8.3E-05 34.6 5.2 28 179-206 112-142 (169)
94 2i6j_A Ssoptp, sulfolobus solf 80.1 3.7 0.00013 32.7 6.3 36 167-205 79-117 (161)
95 1zzw_A Dual specificity protei 79.0 1.8 6.3E-05 34.4 4.1 28 179-206 82-112 (149)
96 2hxp_A Dual specificity protei 78.4 1.8 6.1E-05 35.0 3.9 29 178-206 83-114 (155)
97 3gxh_A Putative phosphatase (D 75.4 14 0.00047 29.9 8.5 38 167-206 86-124 (157)
98 2oud_A Dual specificity protei 71.3 3 0.0001 34.5 3.5 28 179-206 86-116 (177)
99 2jgn_A DBX, DDX3, ATP-dependen 68.5 6.2 0.00021 32.7 4.9 41 176-217 42-82 (185)
100 3nme_A Ptpkis1 protein, SEX4 g 67.0 5.2 0.00018 36.3 4.4 27 179-205 105-134 (294)
101 1ohe_A CDC14B, CDC14B2 phospha 59.8 15 0.0005 34.2 6.1 36 168-206 260-298 (348)
102 1jzt_A Hypothetical 27.5 kDa p 56.7 17 0.00057 32.2 5.7 30 181-211 59-91 (246)
103 4a29_A Engineered retro-aldol 56.6 33 0.0011 30.8 7.6 90 92-206 135-228 (258)
104 1rxd_A Protein tyrosine phosph 53.5 13 0.00046 29.1 4.2 27 179-205 95-123 (159)
105 2rb4_A ATP-dependent RNA helic 52.0 14 0.00048 29.9 4.1 36 179-215 33-68 (175)
106 1fuk_A Eukaryotic initiation f 51.4 17 0.0006 29.0 4.6 45 170-216 21-65 (165)
107 2hjv_A ATP-dependent RNA helic 50.9 11 0.00037 30.3 3.2 37 179-216 34-70 (163)
108 3v0d_A Voltage-sensor containi 49.0 29 0.00099 32.2 6.2 87 95-204 51-145 (339)
109 2i4i_A ATP-dependent RNA helic 47.3 21 0.00072 32.4 5.0 48 168-216 264-311 (417)
110 3d3k_A Enhancer of mRNA-decapp 47.0 16 0.00054 32.6 3.9 31 180-211 85-118 (259)
111 1t5i_A C_terminal domain of A 46.2 14 0.00047 30.0 3.2 37 179-216 30-66 (172)
112 1d5r_A Phosphoinositide phosph 44.4 41 0.0014 30.5 6.4 38 167-204 96-138 (324)
113 3d3j_A Enhancer of mRNA-decapp 44.2 18 0.00062 33.1 3.9 30 181-211 133-165 (306)
114 4h3k_B RNA polymerase II subun 43.4 23 0.00078 30.9 4.2 29 182-211 27-56 (214)
115 2o8n_A APOA-I binding protein; 42.9 19 0.00066 32.3 3.8 30 181-211 80-112 (265)
116 3nbm_A PTS system, lactose-spe 42.2 18 0.0006 28.0 3.0 34 178-212 4-41 (108)
117 2b49_A Protein tyrosine phosph 40.6 25 0.00087 31.4 4.3 31 167-197 196-227 (287)
118 3tsm_A IGPS, indole-3-glycerol 40.5 86 0.0029 28.0 7.8 38 167-206 207-244 (272)
119 3kb2_A SPBC2 prophage-derived 38.7 7.3 0.00025 30.7 0.3 26 233-259 3-28 (173)
120 3rof_A Low molecular weight pr 38.7 17 0.00057 30.0 2.5 39 181-219 7-50 (158)
121 2cwd_A Low molecular weight ph 38.6 17 0.00056 29.8 2.5 40 180-219 4-49 (161)
122 3eaq_A Heat resistant RNA depe 38.4 20 0.00068 30.2 3.1 35 180-215 31-65 (212)
123 3trf_A Shikimate kinase, SK; a 36.7 8.1 0.00028 31.2 0.3 27 232-259 6-32 (185)
124 3p9y_A CG14216, LD40846P; phos 36.4 35 0.0012 29.4 4.2 30 181-211 10-40 (198)
125 3rss_A Putative uncharacterize 35.6 24 0.00081 34.5 3.5 30 179-209 51-83 (502)
126 2yxb_A Coenzyme B12-dependent 34.8 33 0.0011 28.0 3.8 33 179-212 17-53 (161)
127 1jl3_A Arsenate reductase; alp 33.9 37 0.0013 26.8 3.9 37 181-217 4-41 (139)
128 2p6n_A ATP-dependent RNA helic 33.4 27 0.00092 29.0 3.1 35 180-215 54-88 (191)
129 1u2p_A Ptpase, low molecular w 33.4 22 0.00074 29.1 2.4 38 181-218 5-48 (163)
130 4fak_A Ribosomal RNA large sub 32.4 48 0.0016 27.6 4.4 42 173-214 67-113 (163)
131 3rh0_A Arsenate reductase; oxi 32.4 40 0.0014 27.3 3.9 35 181-215 21-56 (148)
132 3vaa_A Shikimate kinase, SK; s 32.1 11 0.00039 31.0 0.5 29 230-259 24-52 (199)
133 1zuh_A Shikimate kinase; alpha 31.6 11 0.00037 30.0 0.3 28 231-259 7-34 (168)
134 3n0a_A Tyrosine-protein phosph 31.6 1.2E+02 0.004 28.3 7.4 85 97-205 50-142 (361)
135 2l2q_A PTS system, cellobiose- 30.3 24 0.00082 26.8 2.0 28 179-206 3-34 (109)
136 1wp9_A ATP-dependent RNA helic 30.2 42 0.0014 30.3 4.1 35 178-213 359-393 (494)
137 2v1x_A ATP-dependent DNA helic 30.1 49 0.0017 32.6 4.8 37 179-216 266-302 (591)
138 2l17_A Synarsc, arsenate reduc 30.0 47 0.0016 26.2 3.8 35 182-216 6-41 (134)
139 2c46_A MRNA capping enzyme; ph 30.0 40 0.0014 29.4 3.7 39 167-205 126-169 (241)
140 1uf9_A TT1252 protein; P-loop, 29.8 14 0.00048 30.0 0.6 27 231-259 8-34 (203)
141 2d7d_A Uvrabc system protein B 29.4 46 0.0016 33.4 4.5 48 167-215 432-479 (661)
142 1jf8_A Arsenate reductase; ptp 28.9 58 0.002 25.5 4.2 37 181-217 4-41 (131)
143 1qhx_A CPT, protein (chloramph 28.8 14 0.00049 29.4 0.5 27 232-259 4-30 (178)
144 1ukz_A Uridylate kinase; trans 28.7 16 0.00056 29.9 0.9 30 229-259 13-42 (203)
145 2l69_A Rossmann 2X3 fold prote 28.5 97 0.0033 23.7 5.1 33 179-212 76-108 (134)
146 1p15_A Protein-tyrosine phosph 28.2 57 0.0019 28.4 4.4 31 167-197 161-194 (253)
147 2yjt_D ATP-dependent RNA helic 34.1 12 0.00042 30.1 0.0 38 179-217 29-66 (170)
148 1e6c_A Shikimate kinase; phosp 28.0 11 0.00039 29.8 -0.2 27 232-259 3-29 (173)
149 3lw7_A Adenylate kinase relate 28.0 13 0.00045 29.0 0.1 25 233-259 3-27 (179)
150 1c4o_A DNA nucleotide excision 27.5 38 0.0013 34.0 3.4 48 167-215 426-473 (664)
151 1k92_A Argininosuccinate synth 27.5 46 0.0016 32.2 3.9 33 176-209 6-38 (455)
152 3m4u_A Tyrosine specific prote 27.0 58 0.002 29.2 4.3 29 168-197 211-240 (306)
153 3ipz_A Monothiol glutaredoxin- 26.9 54 0.0019 24.5 3.6 84 168-258 6-98 (109)
154 3i32_A Heat resistant RNA depe 26.8 40 0.0014 30.4 3.2 35 180-215 28-62 (300)
155 1tvm_A PTS system, galactitol- 26.7 43 0.0015 25.6 2.9 26 181-206 22-52 (113)
156 1oyw_A RECQ helicase, ATP-depe 26.7 55 0.0019 31.6 4.4 37 179-216 235-271 (523)
157 1vkr_A Mannitol-specific PTS s 26.6 43 0.0015 26.3 3.0 26 180-205 13-43 (125)
158 1e2b_A Enzyme IIB-cellobiose; 26.2 44 0.0015 25.3 2.9 30 181-211 4-37 (106)
159 2der_A TRNA-specific 2-thiouri 26.1 47 0.0016 31.1 3.6 30 179-209 16-45 (380)
160 3ohg_A Uncharacterized protein 26.1 79 0.0027 28.5 5.0 26 190-215 218-243 (285)
161 1p8a_A Protein tyrosine phosph 25.9 11 0.00036 30.4 -0.8 38 181-218 5-43 (146)
162 3czc_A RMPB; alpha/beta sandwi 25.8 49 0.0017 25.1 3.1 38 181-218 19-61 (110)
163 2vli_A Antibiotic resistance p 25.8 16 0.00056 29.1 0.4 27 232-259 6-32 (183)
164 1xti_A Probable ATP-dependent 25.8 45 0.0016 29.7 3.4 37 179-216 249-285 (391)
165 3mmj_A MYO-inositol hexaphosph 25.7 61 0.0021 29.8 4.3 28 168-196 202-230 (314)
166 1fpr_A Protein-tyrosine phosph 25.7 59 0.002 28.8 4.1 31 168-198 189-223 (284)
167 2pt5_A Shikimate kinase, SK; a 25.5 16 0.00055 28.8 0.2 25 234-259 3-27 (168)
168 3pey_A ATP-dependent RNA helic 25.5 66 0.0023 28.4 4.4 37 179-216 242-278 (395)
169 3gx8_A Monothiol glutaredoxin- 25.4 41 0.0014 25.9 2.6 28 179-206 14-47 (121)
170 3zyw_A Glutaredoxin-3; metal b 25.2 53 0.0018 24.8 3.2 76 179-258 14-96 (111)
171 3iij_A Coilin-interacting nucl 25.1 14 0.00048 29.7 -0.2 28 231-259 11-38 (180)
172 4grz_A Tyrosine-protein phosph 25.1 65 0.0022 28.5 4.3 30 168-197 191-224 (288)
173 1s2m_A Putative ATP-dependent 24.6 45 0.0015 29.9 3.2 37 179-216 257-293 (400)
174 1wch_A Protein tyrosine phosph 24.5 50 0.0017 30.0 3.4 29 168-197 228-257 (315)
175 1kag_A SKI, shikimate kinase I 24.2 16 0.00056 28.9 0.1 27 232-259 5-31 (173)
176 1to0_A Hypothetical UPF0247 pr 24.2 75 0.0026 26.4 4.2 42 173-214 63-109 (167)
177 1y63_A LMAJ004144AAA protein; 24.2 16 0.00056 29.7 0.0 28 231-259 10-38 (184)
178 2ooq_A Receptor-type tyrosine- 23.9 70 0.0024 28.5 4.2 31 167-197 198-230 (286)
179 2hc1_A Receptor-type tyrosine- 23.7 71 0.0024 28.5 4.3 30 168-197 203-236 (291)
180 4ao6_A Esterase; hydrolase, th 23.6 53 0.0018 27.8 3.3 31 181-212 56-92 (259)
181 2rhm_A Putative kinase; P-loop 23.6 21 0.00072 28.6 0.6 28 231-259 5-32 (193)
182 1hv8_A Putative ATP-dependent 23.5 54 0.0018 28.7 3.4 38 178-216 236-273 (367)
183 2iyv_A Shikimate kinase, SK; t 23.5 19 0.00064 29.0 0.3 26 233-259 4-29 (184)
184 3to5_A CHEY homolog; alpha(5)b 23.4 1E+02 0.0034 24.1 4.7 44 177-220 9-52 (134)
185 2fsf_A Preprotein translocase 23.3 57 0.0019 34.2 3.9 39 178-217 439-477 (853)
186 2cjz_A Human protein tyrosine 23.3 82 0.0028 28.4 4.6 30 168-197 215-249 (305)
187 4az1_A Tyrosine specific prote 23.2 74 0.0025 28.4 4.3 30 167-197 207-237 (302)
188 1z5z_A Helicase of the SNF2/RA 22.6 43 0.0015 29.5 2.5 38 178-216 110-148 (271)
189 4etn_A LMPTP, low molecular we 22.6 21 0.00071 30.2 0.4 38 181-219 35-77 (184)
190 1y1l_A Arsenate reductase (ARS 22.3 55 0.0019 25.3 2.9 34 182-216 1-35 (124)
191 1l8k_A T-cell protein-tyrosine 22.3 86 0.0029 28.3 4.5 31 168-198 194-228 (314)
192 2wmy_A WZB, putative acid phos 22.2 75 0.0026 25.4 3.7 35 181-216 9-44 (150)
193 3ake_A Cytidylate kinase; CMP 22.0 21 0.00071 29.1 0.2 26 233-259 4-29 (208)
194 3ju3_A Probable 2-oxoacid ferr 21.7 78 0.0027 24.3 3.6 32 179-211 12-45 (118)
195 3fdi_A Uncharacterized protein 21.7 22 0.00075 29.9 0.3 26 233-259 8-33 (201)
196 3b7o_A Tyrosine-protein phosph 21.6 92 0.0031 28.1 4.6 31 168-198 224-258 (316)
197 3bl5_A Queuosine biosynthesis 21.6 66 0.0023 26.5 3.4 28 180-208 3-30 (219)
198 4e22_A Cytidylate kinase; P-lo 21.2 23 0.0008 30.6 0.4 28 231-259 27-54 (252)
199 2i1y_A Receptor-type tyrosine- 21.1 92 0.0031 27.9 4.5 31 167-197 210-242 (301)
200 2i75_A Tyrosine-protein phosph 21.1 85 0.0029 28.5 4.3 30 168-197 224-255 (320)
201 2dpl_A GMP synthetase, GMP syn 21.1 73 0.0025 28.7 3.8 45 168-214 9-56 (308)
202 3kkj_A Amine oxidase, flavin-c 21.0 78 0.0027 25.0 3.6 28 184-212 5-32 (336)
203 3t61_A Gluconokinase; PSI-biol 21.0 22 0.00077 29.1 0.3 28 231-259 18-45 (202)
204 2gi4_A Possible phosphotyrosin 20.8 67 0.0023 26.0 3.2 37 182-218 3-45 (156)
205 2wja_A Putative acid phosphata 20.8 76 0.0026 26.1 3.5 36 181-217 27-63 (168)
206 1via_A Shikimate kinase; struc 20.7 19 0.00065 28.8 -0.3 26 233-259 6-31 (175)
207 1wy5_A TILS, hypothetical UPF0 20.6 1.3E+02 0.0043 27.0 5.3 39 177-215 21-65 (317)
208 3fht_A ATP-dependent RNA helic 20.6 56 0.0019 29.3 2.9 36 179-215 265-300 (412)
209 2cm2_A Tyrosine-protein phosph 20.5 80 0.0027 28.3 3.9 31 168-198 199-233 (304)
210 3i36_A Vascular protein tyrosi 20.5 88 0.003 28.6 4.2 30 168-197 222-255 (342)
211 3s3e_A Tyrosine-protein phosph 20.3 91 0.0031 28.1 4.3 31 167-197 221-253 (307)
212 3jux_A Protein translocase sub 20.2 46 0.0016 34.6 2.4 38 178-216 472-509 (822)
213 1zc0_A Tyrosine-protein phosph 20.1 1E+02 0.0034 27.9 4.5 30 168-197 218-251 (309)
214 1yfo_A D1, receptor protein ty 20.1 93 0.0032 27.9 4.3 31 167-197 211-243 (302)
215 1kht_A Adenylate kinase; phosp 20.1 15 0.00052 29.4 -1.0 25 232-257 4-28 (192)
216 1d1q_A Tyrosine phosphatase (E 20.0 68 0.0023 26.0 3.0 38 181-218 8-52 (161)
217 2fek_A Low molecular weight pr 20.0 91 0.0031 25.6 3.8 35 181-216 23-58 (167)
218 2cdn_A Adenylate kinase; phosp 20.0 30 0.001 28.3 0.8 27 232-259 21-47 (201)
No 1
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=99.93 E-value=4.2e-26 Score=181.49 Aligned_cols=101 Identities=26% Similarity=0.380 Sum_probs=89.8
Q ss_pred CcccCHHHHHHHhcC-CCcEEEEeCChhhhcccccCCeEecCCCCCcccccCCCCCccccccccCCccCCCCCccccHHH
Q 022409 91 VKVLTPREAGYAVQL-SSKTLLDVRPSTERKKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTLSYNKQF 169 (297)
Q Consensus 91 ~~~Is~eel~~~l~~-~~~vlIDVRs~~Ef~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~~~~~~~f 169 (297)
++.||++|+.+++.. ++.+|||||++.||+.||||||+|||+..+.++.+
T Consensus 1 ~k~Is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~~----------------------------- 51 (103)
T 3iwh_A 1 MKSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAKLIPMDTIPDNLN----------------------------- 51 (103)
T ss_dssp CCEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEECCGGGGGGCGG-----------------------------
T ss_pred CCCcCHHHHHHHHhCCCCeEEEECCChhHHhcCccCCcccCcccchhhhhh-----------------------------
Confidence 478999999987754 47899999999999999999999999887665542
Q ss_pred HHHHHhcCCCCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHHHHHhCCCCccC
Q 022409 170 LSKVEEKLPKDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLEAAEEEDLVREG 227 (297)
Q Consensus 170 ~~~~~~~l~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~~~lp~~~ 227 (297)
.++++++||+||++|.||..++..|++.||+ ++.|.||+.+|.++++|++.
T Consensus 52 ------~l~~~~~ivv~C~~G~rS~~aa~~L~~~G~~-~~~l~GG~~~W~~~g~pves 102 (103)
T 3iwh_A 52 ------SFNKNEIYYIVCAGGVRSAKVVEYLEANGID-AVNVEGGMHAWGDEGLEIKS 102 (103)
T ss_dssp ------GCCTTSEEEEECSSSSHHHHHHHHHHTTTCE-EEEETTHHHHHCSSSCBCCC
T ss_pred ------hhcCCCeEEEECCCCHHHHHHHHHHHHcCCC-EEEecChHHHHHHCCCccee
Confidence 6788999999999999999999999999996 56799999999999999874
No 2
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=99.92 E-value=8.6e-26 Score=177.25 Aligned_cols=99 Identities=24% Similarity=0.384 Sum_probs=88.8
Q ss_pred CcccCHHHHHHHh-cCCCcEEEEeCChhhhcccccCCeEecCCCCCcccccCCCCCccccccccCCccCCCCCccccHHH
Q 022409 91 VKVLTPREAGYAV-QLSSKTLLDVRPSTERKKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTLSYNKQF 169 (297)
Q Consensus 91 ~~~Is~eel~~~l-~~~~~vlIDVRs~~Ef~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~~~~~~~f 169 (297)
++.|+++|+.+++ +.++.+|||||++.||..||||||+|+|+..+.+..
T Consensus 1 ~~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~------------------------------ 50 (100)
T 3foj_A 1 MESITVTELKEKILDANPVNIVDVRTDQETAMGIIPGAETIPMNSIPDNL------------------------------ 50 (100)
T ss_dssp CCEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEECCGGGGGGCG------------------------------
T ss_pred CCccCHHHHHHHHhcCCCcEEEECCCHHHHhcCcCCCCEECCHHHHHHHH------------------------------
Confidence 4679999999988 456889999999999999999999999987766543
Q ss_pred HHHHHhcCCCCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHHHHHhCCCCc
Q 022409 170 LSKVEEKLPKDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLEAAEEEDLVR 225 (297)
Q Consensus 170 ~~~~~~~l~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~~~lp~ 225 (297)
..++++++||+||++|.||..++..|++.|| ||+.|+||+.+|.+.++|+
T Consensus 51 -----~~l~~~~~ivvyC~~g~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~g~pv 100 (100)
T 3foj_A 51 -----NYFNDNETYYIICKAGGRSAQVVQYLEQNGV-NAVNVEGGMDEFGDEGLEH 100 (100)
T ss_dssp -----GGSCTTSEEEEECSSSHHHHHHHHHHHTTTC-EEEEETTHHHHHCSSSCBC
T ss_pred -----HhCCCCCcEEEEcCCCchHHHHHHHHHHCCC-CEEEecccHHHHHHcCCCC
Confidence 2567899999999999999999999999999 8999999999999999874
No 3
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=99.92 E-value=1.4e-25 Score=176.74 Aligned_cols=101 Identities=26% Similarity=0.397 Sum_probs=90.2
Q ss_pred CcccCHHHHHHHh-cCCCcEEEEeCChhhhcccccCCeEecCCCCCcccccCCCCCccccccccCCccCCCCCccccHHH
Q 022409 91 VKVLTPREAGYAV-QLSSKTLLDVRPSTERKKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTLSYNKQF 169 (297)
Q Consensus 91 ~~~Is~eel~~~l-~~~~~vlIDVRs~~Ef~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~~~~~~~f 169 (297)
++.|+++|+.+++ +.++.+|||||++.||..||||||+|+|+..+.+..
T Consensus 1 ~~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~------------------------------ 50 (103)
T 3eme_A 1 MKSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAKLIPMDTIPDNL------------------------------ 50 (103)
T ss_dssp CCEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCEECCGGGGGGCG------------------------------
T ss_pred CCccCHHHHHHHHhcCCCCEEEECCCHHHHhcCcCCCCEEcCHHHHHHHH------------------------------
Confidence 4679999999988 456889999999999999999999999987765443
Q ss_pred HHHHHhcCCCCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHHHHHhCCCCccC
Q 022409 170 LSKVEEKLPKDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLEAAEEEDLVREG 227 (297)
Q Consensus 170 ~~~~~~~l~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~~~lp~~~ 227 (297)
..++++++||+||++|.||..++..|+++|| ||+.|+||+.+|.+.++|+++
T Consensus 51 -----~~l~~~~~iv~yC~~g~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~g~p~~~ 102 (103)
T 3eme_A 51 -----NSFNKNEIYYIVCAGGVRSAKVVEYLEANGI-DAVNVEGGMHAWGDEGLEIKS 102 (103)
T ss_dssp -----GGCCTTSEEEEECSSSSHHHHHHHHHHTTTC-EEEEETTHHHHHCSSSCBCCC
T ss_pred -----HhCCCCCeEEEECCCChHHHHHHHHHHHCCC-CeEEeCCCHHHHHHCCCcCCC
Confidence 2567899999999999999999999999999 899999999999999998863
No 4
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=99.91 E-value=1.3e-24 Score=178.39 Aligned_cols=114 Identities=25% Similarity=0.363 Sum_probs=98.1
Q ss_pred CCCcccCHHHHHHHhcCCCcEEEEeCChhhhcccccCCeEecCCCCCcccccCCCCCccccccccCCccCCCCCccccHH
Q 022409 89 GKVKVLTPREAGYAVQLSSKTLLDVRPSTERKKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTLSYNKQ 168 (297)
Q Consensus 89 ~~~~~Is~eel~~~l~~~~~vlIDVRs~~Ef~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~~~~~~~ 168 (297)
...+.|+++|+.++++ ++.+|||||++.||+.||||||+|||+..+... ....+++
T Consensus 15 ~~~~~is~~e~~~~l~-~~~~lIDvR~~~e~~~ghIpgAinip~~~~~~~-----------------------~~~~~~~ 70 (129)
T 1tq1_A 15 RVPSSVSVTVAHDLLL-AGHRYLDVRTPEEFSQGHACGAINVPYMNRGAS-----------------------GMSKNTD 70 (129)
T ss_dssp CCCEEEEHHHHHHHHH-HTCCEEEESCHHHHHHCCBTTBEECCSCCCSTT-----------------------TCCCTTT
T ss_pred CCCcccCHHHHHHHhc-CCCEEEECCCHHHHhcCCCCCcEECcHhhcccc-----------------------cccCCHH
Confidence 6778999999999886 568999999999999999999999998654321 0123456
Q ss_pred HHHHHHhcCCCCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHHHHHhCCCCcc
Q 022409 169 FLSKVEEKLPKDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLEAAEEEDLVRE 226 (297)
Q Consensus 169 f~~~~~~~l~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~~~lp~~ 226 (297)
|++++...++++++|||||++|.||..++..|+++||+||+.|+||+.+|.+.++|++
T Consensus 71 ~~~~~~~~l~~~~~ivvyC~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 128 (129)
T 1tq1_A 71 FLEQVSSHFGQSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKNGLPTK 128 (129)
T ss_dssp HHHHHTTTCCTTSSEEEEESSCSHHHHHHHHHHHHHCCSEEEEECCHHHHHHHTCCCC
T ss_pred HHHHHHhhCCCCCeEEEECCCCcHHHHHHHHHHHcCCCCeEEeCCcHHHHHhCCCCCC
Confidence 7777666788999999999999999999999999999999999999999999998875
No 5
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=99.91 E-value=6.7e-25 Score=174.96 Aligned_cols=100 Identities=30% Similarity=0.364 Sum_probs=88.5
Q ss_pred CCcccCHHHHHHHhcCCCcEEEEeCChhhhcccccCCeEecCCCCCcccccCCCCCccccccccCCccCCCCCccccHHH
Q 022409 90 KVKVLTPREAGYAVQLSSKTLLDVRPSTERKKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTLSYNKQF 169 (297)
Q Consensus 90 ~~~~Is~eel~~~l~~~~~vlIDVRs~~Ef~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~~~~~~~f 169 (297)
.++.|+++|+.++++. .+|||||++.||+.||||||+|||+..+.+..
T Consensus 2 ~~~~is~~el~~~l~~--~~iiDvR~~~e~~~ghIpgA~~ip~~~l~~~~------------------------------ 49 (108)
T 3gk5_A 2 YYRSINAADLYENIKA--YTVLDVREPFELIFGSIANSINIPISELREKW------------------------------ 49 (108)
T ss_dssp -CCEECHHHHHHTTTT--CEEEECSCHHHHTTCBCTTCEECCHHHHHHHG------------------------------
T ss_pred cccEeCHHHHHHHHcC--CEEEECCCHHHHhcCcCCCCEEcCHHHHHHHH------------------------------
Confidence 4688999999998765 89999999999999999999999975443322
Q ss_pred HHHHHhcCCCCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHHHHHhCCCCccC
Q 022409 170 LSKVEEKLPKDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLEAAEEEDLVREG 227 (297)
Q Consensus 170 ~~~~~~~l~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~~~lp~~~ 227 (297)
..++++++||+||++|.||..++..|+++|| ||+.|+||+.+|.++++|.+.
T Consensus 50 -----~~l~~~~~ivvyC~~G~rs~~aa~~L~~~G~-~v~~l~GG~~~W~~~~~~~~~ 101 (108)
T 3gk5_A 50 -----KILERDKKYAVICAHGNRSAAAVEFLSQLGL-NIVDVEGGIQSWIEEGYPVVL 101 (108)
T ss_dssp -----GGSCTTSCEEEECSSSHHHHHHHHHHHTTTC-CEEEETTHHHHHHHTTCCCBC
T ss_pred -----HhCCCCCeEEEEcCCCcHHHHHHHHHHHcCC-CEEEEcCcHHHHHHcCCCCCC
Confidence 2568899999999999999999999999999 899999999999999999864
No 6
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=99.91 E-value=5.7e-25 Score=174.68 Aligned_cols=101 Identities=20% Similarity=0.296 Sum_probs=89.2
Q ss_pred CCcccCHHHHHHHhcCCCcEEEEeCChhhhcccccCCeEecCCCCCcccccCCCCCccccccccCCccCCCCCccccHHH
Q 022409 90 KVKVLTPREAGYAVQLSSKTLLDVRPSTERKKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTLSYNKQF 169 (297)
Q Consensus 90 ~~~~Is~eel~~~l~~~~~vlIDVRs~~Ef~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~~~~~~~f 169 (297)
.++.|+++++.++++.++.+|||||++.||..||||||+|||+..+.+
T Consensus 3 ~~~~i~~~~l~~~~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~-------------------------------- 50 (108)
T 1gmx_A 3 QFECINVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQAFHLTNDTLGA-------------------------------- 50 (108)
T ss_dssp SCEEECHHHHHHHHHTTCCEEEECSCHHHHHHCEETTCEECCHHHHHH--------------------------------
T ss_pred cccccCHHHHHHHHhCCCCEEEEcCCHHHHHhCCCccCEeCCHHHHHH--------------------------------
Confidence 467899999999887777999999999999999999999999643221
Q ss_pred HHHHHhcCCCCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHHHHHhCCCCcc
Q 022409 170 LSKVEEKLPKDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLEAAEEEDLVRE 226 (297)
Q Consensus 170 ~~~~~~~l~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~~~lp~~ 226 (297)
.+. .++++++||+||++|.||..++..|++.||+||+.|+||+.+|.+. +|++
T Consensus 51 --~~~-~l~~~~~ivvyc~~g~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~-~p~~ 103 (108)
T 1gmx_A 51 --FMR-DNDFDTPVMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQ-FPAE 103 (108)
T ss_dssp --HHH-HSCTTSCEEEECSSSSHHHHHHHHHHHHTCSSEEEETTHHHHHHHH-CGGG
T ss_pred --HHH-hcCCCCCEEEEcCCCchHHHHHHHHHHcCCceEEEecCCHHHHHHh-CCcc
Confidence 122 4688999999999999999999999999999999999999999998 8886
No 7
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=99.90 E-value=4.9e-24 Score=177.05 Aligned_cols=106 Identities=23% Similarity=0.334 Sum_probs=93.6
Q ss_pred CCCcccCHHHHHHHhc-CCCcEEEEeCChhhhcc-cc--cCCeEecCCCCCcccccCCCCCccccccccCCccCCCCCcc
Q 022409 89 GKVKVLTPREAGYAVQ-LSSKTLLDVRPSTERKK-AW--IKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTLS 164 (297)
Q Consensus 89 ~~~~~Is~eel~~~l~-~~~~vlIDVRs~~Ef~~-gh--IpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~~~ 164 (297)
..++.|+++|+.++++ .++.+|||||++.||+. || ||||+|||+..+.+..
T Consensus 20 ~~~~~is~~el~~~l~~~~~~~liDVR~~~E~~~~gh~~IpgAinip~~~l~~~~------------------------- 74 (137)
T 1qxn_A 20 ADMVMLSPKDAYKLLQENPDITLIDVRDPDELKAMGKPDVKNYKHMSRGKLEPLL------------------------- 74 (137)
T ss_dssp HSSEEECHHHHHHHHHHCTTSEEEECCCHHHHHHTCEECCSSEEECCTTTSHHHH-------------------------
T ss_pred ccCcccCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCcCCCCCEEcchHHhhhHH-------------------------
Confidence 5678999999999987 66799999999999999 99 9999999987654210
Q ss_pred ccHHHHHHHHhcCCCCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHHHHHhCCCCccC
Q 022409 165 YNKQFLSKVEEKLPKDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLEAAEEEDLVREG 227 (297)
Q Consensus 165 ~~~~f~~~~~~~l~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~~~lp~~~ 227 (297)
.+ ..++++++|||||++|.||..++..|++.||+||++|+||+.+|.+.++|++.
T Consensus 75 -------~~-~~l~~~~~ivvyC~~G~rS~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 129 (137)
T 1qxn_A 75 -------AK-SGLDPEKPVVVFCKTAARAALAGKTLREYGFKTIYNSEGGMDKWLEEGLPSLD 129 (137)
T ss_dssp -------HH-HCCCTTSCEEEECCSSSCHHHHHHHHHHHTCSCEEEESSCHHHHHHTTCCEEC
T ss_pred -------hh-ccCCCCCeEEEEcCCCcHHHHHHHHHHHcCCcceEEEcCcHHHHHHCCCCccc
Confidence 11 25788999999999999999999999999999999999999999999999964
No 8
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=99.90 E-value=1.3e-23 Score=173.81 Aligned_cols=115 Identities=21% Similarity=0.222 Sum_probs=95.6
Q ss_pred CCCcccCHHHHHHHhc--CCCcEEEEeCChhhhcccccCCeEecCCCCCcccccCCCCCccccccccCCccCCCCCcccc
Q 022409 89 GKVKVLTPREAGYAVQ--LSSKTLLDVRPSTERKKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTLSYN 166 (297)
Q Consensus 89 ~~~~~Is~eel~~~l~--~~~~vlIDVRs~~Ef~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~~~~~ 166 (297)
..++.|+++|+.++++ .++.+|||||++.||+.||||||+|||+..+.+... ...
T Consensus 20 ~~~~~is~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~l~~~~~-----------------------~~~ 76 (139)
T 3d1p_A 20 SNIQSYSFEDMKRIVGKHDPNVVLVDVREPSEYSIVHIPASINVPYRSHPDAFA-----------------------LDP 76 (139)
T ss_dssp CCCEECCHHHHHHHHHHTCTTEEEEECSCHHHHHHCCCTTCEECCTTTCTTGGG-----------------------SCH
T ss_pred CCcceecHHHHHHHHhCCCCCeEEEECcCHHHHhCCCCCCcEEcCHHHhhhhcc-----------------------CCH
Confidence 5788999999999886 357899999999999999999999999887654321 011
Q ss_pred HHHHHHHHh-cCCCCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHHHHHhCCCCcc
Q 022409 167 KQFLSKVEE-KLPKDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLEAAEEEDLVRE 226 (297)
Q Consensus 167 ~~f~~~~~~-~l~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~~~lp~~ 226 (297)
.+|.+.+.. .++++++|||||++|.||..++..|+++||+||+.|+||+.+|.+.++|+.
T Consensus 77 ~~~~~~~~~~~~~~~~~ivvyC~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 137 (139)
T 3d1p_A 77 LEFEKQIGIPKPDSAKELIFYCASGKRGGEAQKVASSHGYSNTSLYPGSMNDWVSHGGDKL 137 (139)
T ss_dssp HHHHHHHSSCCCCTTSEEEEECSSSHHHHHHHHHHHTTTCCSEEECTTHHHHHHHTTGGGC
T ss_pred HHHHHHHhccCCCCCCeEEEECCCCchHHHHHHHHHHcCCCCeEEeCCcHHHHHHcCCCCC
Confidence 233333332 367889999999999999999999999999999999999999999998874
No 9
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=99.90 E-value=5.4e-24 Score=175.63 Aligned_cols=112 Identities=21% Similarity=0.245 Sum_probs=93.8
Q ss_pred CCCcccCHHHHHHHhc--CCCcEEEEeCChhhhcc-cccCCeEecCCCCCcccccCCCCCccccccccCCccCCCCCccc
Q 022409 89 GKVKVLTPREAGYAVQ--LSSKTLLDVRPSTERKK-AWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTLSY 165 (297)
Q Consensus 89 ~~~~~Is~eel~~~l~--~~~~vlIDVRs~~Ef~~-ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~~~~ 165 (297)
..++.|+++|+.++++ .++.+|||||++.||.. ||||||+|||+..+..+.+....+
T Consensus 19 ~~~~~is~~~l~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA~~ip~~~l~~~~~~~~~~-------------------- 78 (139)
T 2hhg_A 19 SSIETLTTADAIALHKSGASDVVIVDIRDPREIERDGKIPGSFSCTRGMLEFWIDPQSPY-------------------- 78 (139)
T ss_dssp TTSEEECHHHHHHHHHTTCTTEEEEECSCHHHHHHHCCCTTCEECCGGGHHHHHCTTSTT--------------------
T ss_pred HhcCccCHHHHHHHHhccCCCeEEEECCCHHHHHhCCCCCCeEECChHHHHHhcCccchh--------------------
Confidence 5678999999999987 56789999999999999 999999999987765433211000
Q ss_pred cHHHHHHHHhcCCCCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHHHHHhCCCCccC
Q 022409 166 NKQFLSKVEEKLPKDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLEAAEEEDLVREG 227 (297)
Q Consensus 166 ~~~f~~~~~~~l~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~~~lp~~~ 227 (297)
+ ...++++++|||||++|.||..+++.|+++||+||++|+||+.+|.+.++|++.
T Consensus 79 ---~----~~~~~~~~~ivvyC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 133 (139)
T 2hhg_A 79 ---A----KPIFQEDKKFVFYCAGGLRSALAAKTAQDMGLKPVAHIEGGFGAWRDAGGPIEA 133 (139)
T ss_dssp ---C----CGGGGSSSEEEEECSSSHHHHHHHHHHHHHTCCSEEEETTHHHHHHHTTCCCC-
T ss_pred ---h----hccCCCCCeEEEECCCChHHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCCeec
Confidence 0 013568899999999999999999999999999999999999999999999864
No 10
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=99.88 E-value=6.7e-24 Score=164.62 Aligned_cols=94 Identities=28% Similarity=0.498 Sum_probs=77.5
Q ss_pred CcccCHHHHHHHhcCCCcEEEEeCChhhhcccccCCeEecCCCCCcccccCCCCCccccccccCCccCCCCCccccHHHH
Q 022409 91 VKVLTPREAGYAVQLSSKTLLDVRPSTERKKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTLSYNKQFL 170 (297)
Q Consensus 91 ~~~Is~eel~~~l~~~~~vlIDVRs~~Ef~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~~~~~~~f~ 170 (297)
++.|+++|+.++++. +.+|||||++.||+.||||||+|+|+..+.++.
T Consensus 1 ~~~is~~~l~~~~~~-~~~liDvR~~~e~~~ghi~gAi~ip~~~l~~~~------------------------------- 48 (94)
T 1wv9_A 1 MRKVRPEELPALLEE-GVLVVDVRPADRRSTPLPFAAEWVPLEKIQKGE------------------------------- 48 (94)
T ss_dssp -CEECGGGHHHHHHT-TCEEEECCCC--CCSCCSSCCEECCHHHHTTTC-------------------------------
T ss_pred CCcCCHHHHHHHHHC-CCEEEECCCHHHHhcccCCCCEECCHHHHHHHH-------------------------------
Confidence 357899999988865 789999999999999999999999987655432
Q ss_pred HHHHhcCCCCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHHHHHhCC
Q 022409 171 SKVEEKLPKDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLEAAEEED 222 (297)
Q Consensus 171 ~~~~~~l~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~~~ 222 (297)
..+++ ++||+||++|.||..++..|++.||+ |+.|+||+.+|.+.|
T Consensus 49 ----~~l~~-~~ivvyC~~g~rs~~a~~~L~~~G~~-v~~l~GG~~~W~~~G 94 (94)
T 1wv9_A 49 ----HGLPR-RPLLLVCEKGLLSQVAALYLEAEGYE-AMSLEGGLQALTQGK 94 (94)
T ss_dssp ----CCCCS-SCEEEECSSSHHHHHHHHHHHHHTCC-EEEETTGGGCC----
T ss_pred ----HhCCC-CCEEEEcCCCChHHHHHHHHHHcCCc-EEEEcccHHHHHhCc
Confidence 14577 89999999999999999999999998 999999999998753
No 11
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=99.88 E-value=3.6e-23 Score=164.22 Aligned_cols=96 Identities=26% Similarity=0.304 Sum_probs=77.4
Q ss_pred HHHHHhc--CCCcEEEEeCChhhhcccccCCeEecCCCCCcccccCCCCCccccccccCCccCCCCCccccHHHHHHHHh
Q 022409 98 EAGYAVQ--LSSKTLLDVRPSTERKKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTLSYNKQFLSKVEE 175 (297)
Q Consensus 98 el~~~l~--~~~~vlIDVRs~~Ef~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~~~~~~~f~~~~~~ 175 (297)
|+.++++ .++.+|||||++.||..||||||+|||+..+.+ .+..
T Consensus 2 el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi~ip~~~l~~----------------------------------~~~~ 47 (106)
T 3hix_A 2 VLKSRLEWGEPAFTILDVRDRSTYNDGHIMGAMAMPIEDLVD----------------------------------RASS 47 (106)
T ss_dssp -----------CCEEEECSCHHHHHTCEETTCEECCGGGHHH----------------------------------HHHH
T ss_pred hHHHHHHcCCCCeEEEECCCHHHHhcCcCCCCEeCCHHHHHH----------------------------------HHHh
Confidence 4555555 346899999999999999999999999754332 2223
Q ss_pred cCCCCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHHHHHhCCCCccC
Q 022409 176 KLPKDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLEAAEEEDLVREG 227 (297)
Q Consensus 176 ~l~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~~~lp~~~ 227 (297)
.++++++|||||.+|.||..+++.|+.+||+||+.|+||+.+|.++++|.+.
T Consensus 48 ~l~~~~~ivvyc~~g~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~~~~~ 99 (106)
T 3hix_A 48 SLEKSRDIYVYGAGDEQTSQAVNLLRSAGFEHVSELKGGLAAWKAIGGPTEL 99 (106)
T ss_dssp HSCTTSCEEEECSSHHHHHHHHHHHHHTTCSCEEECTTHHHHHHHTTCCEEE
T ss_pred cCCCCCeEEEEECCCChHHHHHHHHHHcCCcCEEEecCCHHHHHHCCCCCCC
Confidence 5788899999999999999999999999999999999999999999999864
No 12
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=99.88 E-value=1.1e-24 Score=177.26 Aligned_cols=126 Identities=21% Similarity=0.334 Sum_probs=95.5
Q ss_pred CCcccCHHHHHHHhcCCCcEEEEeCChhhhcccccCCeEecCCCCCcccccCCCCCccccccccCCccCCCCCc-cccHH
Q 022409 90 KVKVLTPREAGYAVQLSSKTLLDVRPSTERKKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTL-SYNKQ 168 (297)
Q Consensus 90 ~~~~Is~eel~~~l~~~~~vlIDVRs~~Ef~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~~-~~~~~ 168 (297)
.++.|+++|+.+ .++.+|||||++.||..||||||+|||+..+.++..++++++..+.. .+.+.|.... ...++
T Consensus 3 ~~~~i~~~el~~---~~~~~iiDvR~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 77 (134)
T 3g5j_A 3 AMSVIKIEKALK---LDKVIFVDVRTEGEYEEDHILNAINMPLFKNNEHNEVGTIYKMQGKH--EAIQKGFDYVSYKLKD 77 (134)
T ss_dssp --CEECHHHHTT---CTTEEEEECSCHHHHHHCCCTTCEECCSSCHHHHHHHHHHHHHHCHH--HHHHHHHHHHGGGHHH
T ss_pred CccccCHHHHHh---cCCcEEEEcCCHHHHhcCCCCCCEEcCccchhhhhcccceeeecChh--HHHhcccccccccHHH
Confidence 467899999875 56889999999999999999999999998877665556665544321 1122222222 23345
Q ss_pred HHHHHHhcCCCC-CeEEEEe-CCCCcHHHHHHHHHHcCCCCEEEccccHHHHHhCC
Q 022409 169 FLSKVEEKLPKD-TDLIVAC-QKGLRSLAACELLYNAGYRNLFWVQGGLEAAEEED 222 (297)
Q Consensus 169 f~~~~~~~l~kd-~~IVvyC-~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~~~ 222 (297)
+.+.+. .++++ ++||||| ++|.||..+++.|+.+|| ||++|+||+.+|.+..
T Consensus 78 ~~~~~~-~~~~~~~~ivvyC~~~G~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~~ 131 (134)
T 3g5j_A 78 IYLQAA-ELALNYDNIVIYCARGGMRSGSIVNLLSSLGV-NVYQLEGGYKAYRNFV 131 (134)
T ss_dssp HHHHHH-HHHTTCSEEEEECSSSSHHHHHHHHHHHHTTC-CCEEETTHHHHHHHHH
T ss_pred HHHHHH-HhccCCCeEEEEECCCChHHHHHHHHHHHcCC-ceEEEeCcHHHHHHHh
Confidence 555554 45677 8999999 599999999999999999 8999999999998854
No 13
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=99.88 E-value=8.4e-23 Score=171.09 Aligned_cols=101 Identities=22% Similarity=0.255 Sum_probs=89.2
Q ss_pred cccCHHHHHHHhcCC--CcEEEEeCChhhhcccccCCeEecCCCCCcc-cccCCCCCccccccccCCccCCCCCccccHH
Q 022409 92 KVLTPREAGYAVQLS--SKTLLDVRPSTERKKAWIKGSIWIPIFDIDD-TFDAGSLPQKVTNFVMGGWWSGVPTLSYNKQ 168 (297)
Q Consensus 92 ~~Is~eel~~~l~~~--~~vlIDVRs~~Ef~~ghIpGAinIPl~~~~e-~~~~gtl~k~~~~~~~~~~w~G~~~~~~~~~ 168 (297)
..|+++|+.++++.+ +.+|||||++.||..||||||+|||+..+.. +.
T Consensus 16 ~~is~~el~~~l~~~~~~~~liDvR~~~ey~~ghIpgAinip~~~l~~~~~----------------------------- 66 (144)
T 3nhv_A 16 YETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKINEDTT----------------------------- 66 (144)
T ss_dssp TEEEHHHHHHHHHTTCCSEEEEECSCHHHHHHCBCTTCEECCGGGCSTTTT-----------------------------
T ss_pred cccCHHHHHHHHHcCCCCEEEEECcCHHHHhcCCCCCCEECCHHHHhHHHH-----------------------------
Confidence 568999999988764 7899999999999999999999999877653 21
Q ss_pred HHHHHHhcCCCCCeEEEEeCCC--CcHHHHHHHHHHcCCCCEEEccccHHHHHhCCCCccCC
Q 022409 169 FLSKVEEKLPKDTDLIVACQKG--LRSLAACELLYNAGYRNLFWVQGGLEAAEEEDLVREGP 228 (297)
Q Consensus 169 f~~~~~~~l~kd~~IVvyC~~G--~RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~~~lp~~~~ 228 (297)
..++++++|||||.+| .||..+++.|+.+|| +|+.|+||+.+|.+.++|++..
T Consensus 67 ------~~l~~~~~ivvyC~~g~~~rs~~aa~~L~~~G~-~v~~l~GG~~~W~~~g~pv~~~ 121 (144)
T 3nhv_A 67 ------KRLSKEKVIITYCWGPACNGATKAAAKFAQLGF-RVKELIGGIEYWRKENGEVEGT 121 (144)
T ss_dssp ------TTCCTTSEEEEECSCTTCCHHHHHHHHHHHTTC-EEEEEESHHHHHHHTTCCCBSS
T ss_pred ------hhCCCCCeEEEEECCCCccHHHHHHHHHHHCCC-eEEEeCCcHHHHHHCCCCccCC
Confidence 2567889999999988 799999999999999 6999999999999999999753
No 14
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=99.88 E-value=2.7e-23 Score=173.62 Aligned_cols=100 Identities=26% Similarity=0.322 Sum_probs=88.0
Q ss_pred cCHHHHHHHhcC--CCcEEEEeCChhhhcccccCCeEecCCCCCcccccCCCCCccccccccCCccCCCCCccccHHHHH
Q 022409 94 LTPREAGYAVQL--SSKTLLDVRPSTERKKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTLSYNKQFLS 171 (297)
Q Consensus 94 Is~eel~~~l~~--~~~vlIDVRs~~Ef~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~~~~~~~f~~ 171 (297)
|+++|+.++++. ++.+|||||++.||..||||||+|||+..+.+.
T Consensus 2 Is~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi~ip~~~l~~~--------------------------------- 48 (141)
T 3ilm_A 2 SDAHVLKSRLEWGEPAFTILDVRDRSTYNDGHIMGAMAMPIEDLVDR--------------------------------- 48 (141)
T ss_dssp CCHHHHHHHHHHSCSCEEEEECSCHHHHHHCEETTCEECCGGGHHHH---------------------------------
T ss_pred CCHHHHHHHHhcCCCCEEEEECCCHHHHhCCCCCCCEEcCHHHHHHH---------------------------------
Confidence 789999998863 358999999999999999999999997543322
Q ss_pred HHHhcCCCCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHHHHHhCCCCccC
Q 022409 172 KVEEKLPKDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLEAAEEEDLVREG 227 (297)
Q Consensus 172 ~~~~~l~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~~~lp~~~ 227 (297)
+...++++++|||||.+|.||..+++.|+..||+||+.|+||+.+|.+.++|++.
T Consensus 49 -~~~~l~~~~~ivvyC~~g~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 103 (141)
T 3ilm_A 49 -ASSSLEKSRDIYVYGAGDEQTSQAVNLLRSAGFEHVSELKGGLAAWKAIGGPTEG 103 (141)
T ss_dssp -HHTTSCTTSEEEEECSSHHHHHHHHHHHHHTTCCSEEECTTHHHHHHHTTCCEEE
T ss_pred -HHhcCCCCCeEEEEECCChHHHHHHHHHHHcCCCCEEEecCHHHHHHHCCCCccc
Confidence 2235788999999999999999999999999999999999999999999999964
No 15
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=99.87 E-value=4.9e-23 Score=167.80 Aligned_cols=102 Identities=25% Similarity=0.258 Sum_probs=88.2
Q ss_pred CCcccCHHHHHHHhcCC--CcEEEEeCChhhh-cccccCCeEecCCCCCcccccCCCCCccccccccCCccCCCCCcccc
Q 022409 90 KVKVLTPREAGYAVQLS--SKTLLDVRPSTER-KKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTLSYN 166 (297)
Q Consensus 90 ~~~~Is~eel~~~l~~~--~~vlIDVRs~~Ef-~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~~~~~ 166 (297)
....|+++|+.++++.+ +.+|||||++.|| ..||||||+|||+..+.++.
T Consensus 13 ~~~~is~~el~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA~nip~~~l~~~~--------------------------- 65 (124)
T 3flh_A 13 LSLYIDHHTVLADMQNATGKYVVLDVRNAPAQVKKDQIKGAIAMPAKDLATRI--------------------------- 65 (124)
T ss_dssp HTTEECHHHHHHHHHHTCCCEEEEECCCSCHHHHCCEETTCEECCHHHHHHHG---------------------------
T ss_pred ccceecHHHHHHHHHcCCCCEEEEECCCHHHHHhcCcCCCCEECCHHHHHHHH---------------------------
Confidence 34679999999988654 4899999999998 99999999999975443222
Q ss_pred HHHHHHHHhcCCCCCeEEEEeCCCCc--HHHHHHHHHHcCCCCEEEccccHHHHHhCCCCccC
Q 022409 167 KQFLSKVEEKLPKDTDLIVACQKGLR--SLAACELLYNAGYRNLFWVQGGLEAAEEEDLVREG 227 (297)
Q Consensus 167 ~~f~~~~~~~l~kd~~IVvyC~~G~R--S~~aa~~L~~~Gy~nV~~L~GG~~aw~~~~lp~~~ 227 (297)
..++++++|||||++|.| |..++..|++.||+ |+.|+||+.+|...++|...
T Consensus 66 --------~~l~~~~~ivvyC~~g~r~~s~~a~~~L~~~G~~-v~~l~GG~~~W~~~~~p~~~ 119 (124)
T 3flh_A 66 --------GELDPAKTYVVYDWTGGTTLGKTALLVLLSAGFE-AYELAGALEGWKGMQLPLEH 119 (124)
T ss_dssp --------GGSCTTSEEEEECSSSSCSHHHHHHHHHHHHTCE-EEEETTHHHHHHHTTCCEEC
T ss_pred --------hcCCCCCeEEEEeCCCCchHHHHHHHHHHHcCCe-EEEeCCcHHHHHHcCCCCCc
Confidence 257889999999999999 89999999999996 99999999999999998863
No 16
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=99.87 E-value=2.1e-22 Score=168.68 Aligned_cols=109 Identities=22% Similarity=0.312 Sum_probs=85.5
Q ss_pred CCcccCHHHHHHHhcC-CCcEEEEeCChhhhcc-ccc------CCeEecCCCCCcccccCCCCCccccccccCCccCCCC
Q 022409 90 KVKVLTPREAGYAVQL-SSKTLLDVRPSTERKK-AWI------KGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVP 161 (297)
Q Consensus 90 ~~~~Is~eel~~~l~~-~~~vlIDVRs~~Ef~~-ghI------pGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~ 161 (297)
.++.|+++|+.++++. ++.+|||||++.||+. ||| |||+|||+.. .+.
T Consensus 3 ~~~~is~~el~~~l~~~~~~~liDVR~~~e~~~~ghi~~~g~~pgAv~ip~~~-~~~----------------------- 58 (148)
T 2fsx_A 3 YAGDITPLQAWEMLSDNPRAVLVDVRCEAEWRFVGVPDLSSLGREVVYVEWAT-SDG----------------------- 58 (148)
T ss_dssp CSEEECHHHHHHHHHHCTTCEEEECSCHHHHHHTCEECCGGGTCCCEECCSBC-TTS-----------------------
T ss_pred ccccCCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCCccccCCCCcEEeeeec-ccc-----------------------
Confidence 4678999999998874 6889999999999997 999 9999999876 111
Q ss_pred CccccHHHHHHHHhc-----CCCCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHHHHHhCCCC
Q 022409 162 TLSYNKQFLSKVEEK-----LPKDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLEAAEEEDLV 224 (297)
Q Consensus 162 ~~~~~~~f~~~~~~~-----l~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~~~lp 224 (297)
..+++|.+++.+. ++++++|||||++|.||..++..|+.+||+||+.|+||+.+|.+.+.+
T Consensus 59 --~~~~~~~~~l~~~l~~~~~~~~~~ivvyC~~G~rS~~aa~~L~~~G~~~v~~l~GG~~~w~~~~g~ 124 (148)
T 2fsx_A 59 --THNDNFLAELRDRIPADADQHERPVIFLCRSGNRSIGAAEVATEAGITPAYNVLDGFEGHLDAEGH 124 (148)
T ss_dssp --CBCTTHHHHHHHHCC-------CCEEEECSSSSTHHHHHHHHHHTTCCSEEEETTTTTCCCCTTSC
T ss_pred --ccCHHHHHHHHHHHhhccCCCCCEEEEEcCCChhHHHHHHHHHHcCCcceEEEcCChhhhhhhccc
Confidence 0234455555543 378899999999999999999999999999999999999666554443
No 17
>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1
Probab=99.86 E-value=2.4e-22 Score=169.74 Aligned_cols=108 Identities=17% Similarity=0.234 Sum_probs=91.4
Q ss_pred CCCcccCHHHHHHHhcCCCcEEEEeCChhhhcccccCCeEecCCCCCcccccCCCCCccccccccCCccCCCCCccccHH
Q 022409 89 GKVKVLTPREAGYAVQLSSKTLLDVRPSTERKKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTLSYNKQ 168 (297)
Q Consensus 89 ~~~~~Is~eel~~~l~~~~~vlIDVRs~~Ef~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~~~~~~~ 168 (297)
..++.|+++|+.++++.++.+|||||++.||+.||||||+|||+..+.+.
T Consensus 25 ~~~~~Is~~el~~~l~~~~~~lIDvR~~~ey~~ghIpgAinip~~~l~~~------------------------------ 74 (152)
T 1t3k_A 25 RSISYITSTQLLPLHRRPNIAIIDVRDEERNYDGHIAGSLHYASGSFDDK------------------------------ 74 (152)
T ss_dssp SSSEEECTTTTTTCCCCTTEEEEEESCSHHHHSSCCCSSEEECCSSSSTT------------------------------
T ss_pred CCCceECHHHHHHHhcCCCEEEEECCChhhccCccCCCCEECCHHHHHHH------------------------------
Confidence 45678899998887766788999999999999999999999998765432
Q ss_pred HHHHHHhcCCCCCeEEEEeC-CCCcHHHHHHHHHH--------cCCCCEEEccccHHHHHhCCCCccC
Q 022409 169 FLSKVEEKLPKDTDLIVACQ-KGLRSLAACELLYN--------AGYRNLFWVQGGLEAAEEEDLVREG 227 (297)
Q Consensus 169 f~~~~~~~l~kd~~IVvyC~-~G~RS~~aa~~L~~--------~Gy~nV~~L~GG~~aw~~~~lp~~~ 227 (297)
+.++.+.++++++|||||+ +|.||..++..|.+ .||+||+.|+||+.+|.+.++|++.
T Consensus 75 -~~~l~~~~~~~~~iVvyC~~~G~rs~~aa~~L~~~l~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~ 141 (152)
T 1t3k_A 75 -ISHLVQNVKDKDTLVFHSALSQVRGPTCARRLVNYLDEKKEDTGIKNIMILERGFNGWEASGKPVCR 141 (152)
T ss_dssp -HHHHHHTCCSCCEEEESSSCCSSSHHHHHHHHHHHHHHSSSCCCSSEEEEESSTTHHHHHHSCSSCC
T ss_pred -HHHHHHhcCCCCEEEEEcCCCCcchHHHHHHHHHHHHHHHHhcCCCcEEEEcCCHHHHHHcCCcccc
Confidence 2233335678899999999 99999999988754 8999999999999999999999975
No 18
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=99.86 E-value=5.9e-23 Score=164.01 Aligned_cols=98 Identities=18% Similarity=0.302 Sum_probs=82.9
Q ss_pred cccCHHHHHHHhcCCCcEEEEeCChhhhcccccCCeEecCCCCCcccccCCCCCccccccccCCccCCCCCccccHHHHH
Q 022409 92 KVLTPREAGYAVQLSSKTLLDVRPSTERKKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTLSYNKQFLS 171 (297)
Q Consensus 92 ~~Is~eel~~~l~~~~~vlIDVRs~~Ef~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~~~~~~~f~~ 171 (297)
..|+++|+ +.++.+|||||++.||+.||||||+|||+..+.++. .
T Consensus 5 ~~is~~el----~~~~~~liDvR~~~e~~~ghIpgAi~ip~~~l~~~~-------------------------------~ 49 (110)
T 2k0z_A 5 YAISLEEV----NFNDFIVVDVRELDEYEELHLPNATLISVNDQEKLA-------------------------------D 49 (110)
T ss_dssp TEEETTTC----CGGGSEEEEEECHHHHHHSBCTTEEEEETTCHHHHH-------------------------------H
T ss_pred eeeCHHHh----ccCCeEEEECCCHHHHhcCcCCCCEEcCHHHHHHHH-------------------------------H
Confidence 45777775 245789999999999999999999999987654321 1
Q ss_pred HHHhcCCCCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHHHHHhCCCCccC
Q 022409 172 KVEEKLPKDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLEAAEEEDLVREG 227 (297)
Q Consensus 172 ~~~~~l~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~~~lp~~~ 227 (297)
. ..++++++|||||++|.||..+++.|+.+||++ +.|+||+.+|.+.++|++.
T Consensus 50 ~--~~~~~~~~ivvyC~~G~rs~~aa~~L~~~G~~~-~~l~GG~~~W~~~g~p~~~ 102 (110)
T 2k0z_A 50 F--LSQHKDKKVLLHCRAGRRALDAAKSMHELGYTP-YYLEGNVYDFEKYGFRMVY 102 (110)
T ss_dssp H--HHSCSSSCEEEECSSSHHHHHHHHHHHHTTCCC-EEEESCGGGTTTTTCCCBC
T ss_pred h--cccCCCCEEEEEeCCCchHHHHHHHHHHCCCCE-EEecCCHHHHHHCCCcEec
Confidence 0 136789999999999999999999999999999 9999999999999999863
No 19
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=99.85 E-value=7.8e-22 Score=162.73 Aligned_cols=109 Identities=17% Similarity=0.163 Sum_probs=91.7
Q ss_pred CCcccCHHHHHHHhc-CCCcEEEEeCChhhhcc-ccc------CCeEecCCCCCcccccCCCCCccccccccCCccCCCC
Q 022409 90 KVKVLTPREAGYAVQ-LSSKTLLDVRPSTERKK-AWI------KGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVP 161 (297)
Q Consensus 90 ~~~~Is~eel~~~l~-~~~~vlIDVRs~~Ef~~-ghI------pGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~ 161 (297)
....|+++|+.++++ .++.+|||||++.||+. +|+ |||+|||+..+
T Consensus 3 ~~~~is~~e~~~~l~~~~~~~liDVR~~~E~~~~~~~~~~g~~~ga~~ip~~~~-------------------------- 56 (134)
T 1vee_A 3 SGSSGSAKNAYTKLGTDDNAQLLDIRATADFRQVGSPNIKGLGKKAVSTVYNGE-------------------------- 56 (134)
T ss_dssp CSCBCCHHHHHHHHHHCTTEEEEECSCHHHHHHTCEECCTTTSCCCEECCCCGG--------------------------
T ss_pred CCCccCHHHHHHHHHhCCCeEEEEcCCHHHHhhcCCCcccccCCceEEeecccc--------------------------
Confidence 467899999999886 46789999999999986 444 69999996542
Q ss_pred CccccHHHHHHHHhcC--CCCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccH---HHHHhCCCCccC
Q 022409 162 TLSYNKQFLSKVEEKL--PKDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGL---EAAEEEDLVREG 227 (297)
Q Consensus 162 ~~~~~~~f~~~~~~~l--~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~---~aw~~~~lp~~~ 227 (297)
.+++|.+++.+.+ +++++|||||++|.||..|+..|+++||+|||+|.||+ .+|.+.++|++.
T Consensus 57 ---~~~~~~~~l~~~~~~~~~~~ivv~C~sG~RS~~aa~~L~~~G~~~v~~l~GG~~~~~~W~~~g~p~~~ 124 (134)
T 1vee_A 57 ---DKPGFLKKLSLKFKDPENTTLYILDKFDGNSELVAELVALNGFKSAYAIKDGAEGPRGWLNSSLPWIE 124 (134)
T ss_dssp ---GHHHHHHHHHTTCSCGGGCEEEEECSSSTTHHHHHHHHHHHTCSEEEECTTTTTSTTSSGGGTCCEEC
T ss_pred ---cChhHHHHHHHHhCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCcceEEecCCccCCcchhhcCCCCCC
Confidence 1245666666544 68899999999999999999999999999999999999 789999999964
No 20
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=99.85 E-value=3.4e-22 Score=161.54 Aligned_cols=113 Identities=19% Similarity=0.183 Sum_probs=84.0
Q ss_pred cccCHHHHHHHhcCC-CcEEEEeCChhhhcccccCCeEecCCCCCcccccCCCCCccccccccCCccCCCCCccccHHHH
Q 022409 92 KVLTPREAGYAVQLS-SKTLLDVRPSTERKKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTLSYNKQFL 170 (297)
Q Consensus 92 ~~Is~eel~~~l~~~-~~vlIDVRs~~Ef~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~~~~~~~f~ 170 (297)
+.|+++|+.++++.+ +.+|||||++.||+.||||||+|||+..+.+... . .....++.+
T Consensus 1 ~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~~~~~~~--~------------------~~~~~~~~l 60 (127)
T 3i2v_A 1 SRVSVTDYKRLLDSGAFHLLLDVRPQVEVDICRLPHALHIPLKHLERRDA--E------------------SLKLLKEAI 60 (127)
T ss_dssp CEECHHHHHHHHHHTCCCEEEECSCHHHHHHCCCTTSEECCHHHHHTTCH--H------------------HHHHHHHHH
T ss_pred CCCCHHHHHHHHhCCCCeEEEECCCHHHhhheecCCceeCChHHHhhhhh--h------------------hHHHHHHHH
Confidence 368999999988654 5899999999999999999999999876554321 0 000011111
Q ss_pred HHHHh--cCCCCCeEEEEeCCCCcHHHHHHHHHHc------CCCCEEEccccHHHHHhCCCC
Q 022409 171 SKVEE--KLPKDTDLIVACQKGLRSLAACELLYNA------GYRNLFWVQGGLEAAEEEDLV 224 (297)
Q Consensus 171 ~~~~~--~l~kd~~IVvyC~~G~RS~~aa~~L~~~------Gy~nV~~L~GG~~aw~~~~lp 224 (297)
..... .++++++|||||++|.||..++..|.++ ||.||+.|+||+.+|.++..|
T Consensus 61 ~~~~~~~~~~~~~~ivv~C~~G~rs~~a~~~L~~~gg~~~~G~~~v~~l~GG~~~W~~~~~~ 122 (127)
T 3i2v_A 61 WEEKQGTQEGAAVPIYVICKLGNDSQKAVKILQSLSAAQELDPLTVRDVVGGLMAWAAKIDG 122 (127)
T ss_dssp HHHHTTC---CCEEEEEECSSSSHHHHHHHHHHHHHHTTSSSCEEEEEETTHHHHHHHHTCT
T ss_pred hhhcccccCCCCCeEEEEcCCCCcHHHHHHHHHHhhccccCCCceEEEecCCHHHHHHhcCC
Confidence 11111 1234569999999999999999999999 688999999999999987544
No 21
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=99.85 E-value=7.7e-22 Score=181.59 Aligned_cols=135 Identities=16% Similarity=0.182 Sum_probs=105.8
Q ss_pred ccCCCcCCcceEeccCCchhhhhHHhhhHHHHHHHHHhhhCCCCcccCHHHHHHHhcCCCcEEEEeCChhhhcccccCCe
Q 022409 48 YIAPSFNLGGIRMQAGGEEYELKQMRDMAAAKKRWDALIRDGKVKVLTPREAGYAVQLSSKTLLDVRPSTERKKAWIKGS 127 (297)
Q Consensus 48 ~~~~~~~~~~v~~qa~~~~~~~~~~~~~a~~~~~w~~~~~~~~~~~Is~eel~~~l~~~~~vlIDVRs~~Ef~~ghIpGA 127 (297)
...++|.+..|++..+ +.++..... .......+.|+++|+.++++.++.+|||||++.||+.||||||
T Consensus 90 ~~~~~F~~l~vk~k~e-----iV~~g~~~~-------dp~~~~~~~Is~~el~~ll~~~~~vlIDVR~~~Ey~~GHIpGA 157 (265)
T 4f67_A 90 DNKNPFDKAKVKLRKE-----IVTMGVQKV-------DPSYNAGTYLSPEEWHQFIQDPNVILLDTRNDYEYELGTFKNA 157 (265)
T ss_dssp ESSCCCSSEEEEECSS-----SSCCCCTTC-------CCTTCTTCEECHHHHHHHTTCTTSEEEECSCHHHHHHEEETTC
T ss_pred ccCCCccccccccccc-----cccCCCCCc-------CcccCCCceECHHHHHHHhcCCCeEEEEeCCchHhhcCcCCCC
Confidence 4678999999999884 222211100 0112567899999999999888899999999999999999999
Q ss_pred EecCCCCCcccccCCCCCccccccccCCccCCCCCccccHHHHHHHHhcCCCCCeEEEEeCCCCcHHHHHHHHHHcCCCC
Q 022409 128 IWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTLSYNKQFLSKVEEKLPKDTDLIVACQKGLRSLAACELLYNAGYRN 207 (297)
Q Consensus 128 inIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~~~~~~~f~~~~~~~l~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~n 207 (297)
+|+|+..+.+. ++.+.... ..+++++||+||++|.||..++..|.+.||+|
T Consensus 158 iniP~~~~~~~----------------------------~~~l~~~l-~~~kdk~IVvyC~~G~RS~~Aa~~L~~~Gf~n 208 (265)
T 4f67_A 158 INPDIENFREF----------------------------PDYVQRNL-IDKKDKKIAMFCTGGIRCEKTTAYMKELGFEH 208 (265)
T ss_dssp BCCCCSSGGGH----------------------------HHHHHHHT-GGGTTSCEEEECSSSHHHHHHHHHHHHHTCSS
T ss_pred EeCCHHHHHhh----------------------------HHHHHHhh-hhCCCCeEEEEeCCChHHHHHHHHHHHcCCCC
Confidence 99998765432 12222211 23678999999999999999999999999999
Q ss_pred EEEccccHHHHHhCCC
Q 022409 208 LFWVQGGLEAAEEEDL 223 (297)
Q Consensus 208 V~~L~GG~~aw~~~~l 223 (297)
||.|+||+.+|.++.-
T Consensus 209 V~~L~GGi~aW~~~~~ 224 (265)
T 4f67_A 209 VYQLHDGILNYLESIP 224 (265)
T ss_dssp EEEETTHHHHHHHHSC
T ss_pred EEEecCHHHHHHHhcC
Confidence 9999999999998643
No 22
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.84 E-value=1.3e-20 Score=171.42 Aligned_cols=119 Identities=18% Similarity=0.139 Sum_probs=97.3
Q ss_pred CcccCHHHHHHHhcCCCcEEEEeCChhhhcccccCCeEecCCCCCcccccCCCCCccccccccCCccCCCCCccccH-HH
Q 022409 91 VKVLTPREAGYAVQLSSKTLLDVRPSTERKKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTLSYNK-QF 169 (297)
Q Consensus 91 ~~~Is~eel~~~l~~~~~vlIDVRs~~Ef~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~~~~~~-~f 169 (297)
.+.|+++++.++++.++.+|||||++.||..||||||+|||+..+.++.. ..+.+.+.+ .|
T Consensus 8 ~~~is~~~l~~~l~~~~~~iiDvR~~~ey~~ghIpgA~~ip~~~l~~~~~------------------~~~~~~~~~~~~ 69 (271)
T 1e0c_A 8 PLVIEPADLQARLSAPELILVDLTSAARYAEGHIPGARFVDPKRTQLGQP------------------PAPGLQPPREQL 69 (271)
T ss_dssp CSEECHHHHHTTTTCTTEEEEECSCHHHHHHCBSTTCEECCGGGGSCCCT------------------TCTTSCCCHHHH
T ss_pred CceeeHHHHHHhccCCCeEEEEcCCcchhhhCcCCCCEECCHHHhccCCC------------------CCCCCCCCHHHH
Confidence 45899999999887678899999999999999999999999887654421 112222333 44
Q ss_pred HHHHHhc-CCCCCeEEEEeCCCC-cHHHHHHHHHHcCCCCEEEccccHHHHHhCCCCccC
Q 022409 170 LSKVEEK-LPKDTDLIVACQKGL-RSLAACELLYNAGYRNLFWVQGGLEAAEEEDLVREG 227 (297)
Q Consensus 170 ~~~~~~~-l~kd~~IVvyC~~G~-RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~~~lp~~~ 227 (297)
.+.+... ++++++|||||++|. ||..+++.|+.+||+||++|+||+.+|...++|++.
T Consensus 70 ~~~~~~~gi~~~~~vvvyc~~g~~~s~~a~~~L~~~G~~~v~~L~GG~~~w~~~g~p~~~ 129 (271)
T 1e0c_A 70 ESLFGELGHRPEAVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRPLSR 129 (271)
T ss_dssp HHHHHHHTCCTTCEEEEECSSSSHHHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBC
T ss_pred HHHHHHcCCCCCCeEEEEcCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHcCCCccC
Confidence 4444433 788999999999888 999999999999999999999999999999999864
No 23
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.82 E-value=2.8e-20 Score=169.20 Aligned_cols=114 Identities=17% Similarity=0.168 Sum_probs=93.8
Q ss_pred cccCHHHHHHHhcCCCcEEEEeCChhhhc--------ccccCCeEecCCCCCcccccCCCCCccccccccCCccCCCCCc
Q 022409 92 KVLTPREAGYAVQLSSKTLLDVRPSTERK--------KAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTL 163 (297)
Q Consensus 92 ~~Is~eel~~~l~~~~~vlIDVRs~~Ef~--------~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~~ 163 (297)
..|+++++.++++.++.+|||||++.||. .||||||+|||+..+.+... + .
T Consensus 147 ~~i~~~~l~~~l~~~~~~liDvR~~~e~~g~~~~~~~~ghIpgA~~ip~~~~~~~~~--~-------------------~ 205 (271)
T 1e0c_A 147 PTASRDYLLGRLGAADLAIWDARSPQEYRGEKVLAAKGGHIPGAVNFEWTAAMDPSR--A-------------------L 205 (271)
T ss_dssp TBCCHHHHHHHTTCTTEEEEECSCHHHHTTSSCCSSSCSBCTTCEECCGGGGEEGGG--T-------------------T
T ss_pred ccccHHHHHHHhcCCCcEEEEcCChhhcCCccCCCCcCCcCCCceeccHHHhCCCCC--C-------------------C
Confidence 45799999999887789999999999999 99999999999887654310 0 0
Q ss_pred cccHHHHHHHHh-cCCCCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHHHHHhC-CCCcc
Q 022409 164 SYNKQFLSKVEE-KLPKDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLEAAEEE-DLVRE 226 (297)
Q Consensus 164 ~~~~~f~~~~~~-~l~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~~-~lp~~ 226 (297)
...++|.+.+.+ .++++++||+||++|.||..++..|+.+||+||++|+||+.+|.+. ++|++
T Consensus 206 ~~~~~l~~~~~~~~~~~~~~ivvyC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~~~~pv~ 270 (271)
T 1e0c_A 206 RIRTDIAGRLEELGITPDKEIVTHCQTHHRSGLTYLIAKALGYPRVKGYAGSWGEWGNHPDTPVE 270 (271)
T ss_dssp EECTTHHHHHHHTTCCTTSEEEEECSSSSHHHHHHHHHHHTTCSCEEECSSHHHHHTTCTTCCCB
T ss_pred CCHHHHHHHHHHcCCCCCCCEEEECCchHHHHHHHHHHHHcCCCCceeeCCcHHHHhcCCCCCCc
Confidence 111344444433 4788999999999999999999999999999999999999999998 88875
No 24
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.82 E-value=4.7e-20 Score=168.67 Aligned_cols=119 Identities=20% Similarity=0.247 Sum_probs=97.0
Q ss_pred CcccCHHHHHHHhcCCCcEEEEeC----------ChhhhcccccCCeEecCCCCCcccccCCCCCccccccccCCccCCC
Q 022409 91 VKVLTPREAGYAVQLSSKTLLDVR----------PSTERKKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGV 160 (297)
Q Consensus 91 ~~~Is~eel~~~l~~~~~vlIDVR----------s~~Ef~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~ 160 (297)
...|+++|+.++++.++.+||||| ++.||..||||||+|+|+..+.+... ..
T Consensus 3 ~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~~~~~~~e~~~ghIpgAi~ip~~~l~~~~~------------------~~ 64 (280)
T 1urh_A 3 TWFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTS------------------PL 64 (280)
T ss_dssp CCEECHHHHHTTTTCTTEEEEECCCCCSSCTTCCHHHHHHHSBCTTCEECCGGGGSCSSS------------------SS
T ss_pred CceeeHHHHHHhcCCCCeEEEEeeccCCcccccchhhhhhhCcCCCCEECCHHHhcCCCC------------------CC
Confidence 467999999998877789999999 78899999999999999876544311 11
Q ss_pred CCccc-cHHHHHHHHhc-CCCCCeEEEEeCCCCc-HHHHHHHHHHcCCCCEEEccccHHHHHhCCCCccC
Q 022409 161 PTLSY-NKQFLSKVEEK-LPKDTDLIVACQKGLR-SLAACELLYNAGYRNLFWVQGGLEAAEEEDLVREG 227 (297)
Q Consensus 161 ~~~~~-~~~f~~~~~~~-l~kd~~IVvyC~~G~R-S~~aa~~L~~~Gy~nV~~L~GG~~aw~~~~lp~~~ 227 (297)
+.+.+ ..+|.+.+... ++++++|||||++|.| |..+++.|+.+||+||++|+||+.+|.+.++|++.
T Consensus 65 ~~~~~~~~~~~~~~~~~gi~~~~~ivvyc~~g~~~a~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 134 (280)
T 1urh_A 65 PHMLPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEE 134 (280)
T ss_dssp SSCCCCHHHHHHHHHHTTCCTTSEEEEECSSSCSSHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBB
T ss_pred CCCCCCHHHHHHHHHHcCCCCCCeEEEECCCCCccHHHHHHHHHHcCCCCEEEecCCHHHHHHCCCcccC
Confidence 22222 34555555543 6889999999999998 99999999999999999999999999999999864
No 25
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=99.81 E-value=2.1e-21 Score=147.60 Aligned_cols=80 Identities=25% Similarity=0.437 Sum_probs=66.7
Q ss_pred CcEEEEeCChhhhcccccCCeEecCCCCCcccccCCCCCccccccccCCccCCCCCccccHHHHHHHHhcCCCCCeEEEE
Q 022409 107 SKTLLDVRPSTERKKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTLSYNKQFLSKVEEKLPKDTDLIVA 186 (297)
Q Consensus 107 ~~vlIDVRs~~Ef~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~~~~~~~f~~~~~~~l~kd~~IVvy 186 (297)
+.+|||||++.||+.||||||+|+|+..+.+. +.++ ..+++++||+|
T Consensus 1 ~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~-------------------------------~~~l--~~~~~~~ivv~ 47 (85)
T 2jtq_A 1 AEHWIDVRVPEQYQQEHVQGAINIPLKEVKER-------------------------------IATA--VPDKNDTVKVY 47 (85)
T ss_dssp CEEEEECSCHHHHTTEEETTCEECCHHHHHHH-------------------------------HHHH--CCCTTSEEEEE
T ss_pred CCEEEECCCHHHHHhCCCCCCEEcCHHHHHHH-------------------------------HHHh--CCCCCCcEEEE
Confidence 46899999999999999999999996543221 1111 24788999999
Q ss_pred eCCCCcHHHHHHHHHHcCCCCEEEccccHHHHHh
Q 022409 187 CQKGLRSLAACELLYNAGYRNLFWVQGGLEAAEE 220 (297)
Q Consensus 187 C~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~ 220 (297)
|++|.||..++..|+++||+||+.+ ||+.+|..
T Consensus 48 C~~g~rs~~aa~~L~~~G~~~v~~l-GG~~~w~~ 80 (85)
T 2jtq_A 48 CNAGRQSGQAKEILSEMGYTHVENA-GGLKDIAM 80 (85)
T ss_dssp ESSSHHHHHHHHHHHHTTCSSEEEE-EETTTCCS
T ss_pred cCCCchHHHHHHHHHHcCCCCEEec-cCHHHHhc
Confidence 9999999999999999999999999 99888843
No 26
>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}
Probab=99.81 E-value=4.1e-20 Score=155.76 Aligned_cols=121 Identities=19% Similarity=0.253 Sum_probs=91.6
Q ss_pred CCcccCHHHHHHHhcCC----CcEEEEeCChhhhcccccCCeEecCCCCCcccccCCCCCccccccccCCccCCCCCccc
Q 022409 90 KVKVLTPREAGYAVQLS----SKTLLDVRPSTERKKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTLSY 165 (297)
Q Consensus 90 ~~~~Is~eel~~~l~~~----~~vlIDVRs~~Ef~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~~~~ 165 (297)
.++.|+++++.++++.+ +.+|||||++ ||..||||||+|||+..+.+. .
T Consensus 3 ~~~~Is~~el~~~l~~~~~~~~~~lIDvR~~-ey~~gHIpGAinip~~~l~~~--------------------------~ 55 (152)
T 2j6p_A 3 NYTYIKPEELVELLDNPDSLVKAAVIDCRDS-DRDCGFIVNSINMPTISCTEE--------------------------M 55 (152)
T ss_dssp CCEEECHHHHHHHHHSHHHHHTEEEEECCST-TGGGCBCTTCEECCTTTCCHH--------------------------H
T ss_pred CcCccCHHHHHHHHhCCCCCCCEEEEEcCcH-HhCcCcCCCcEECChhHhhHH--------------------------H
Confidence 46789999999988763 7899999999 999999999999998765431 0
Q ss_pred cHHHHHHHHhcCCCCCeEEEEe-CCCCcHHHHH----HHHHHcCC--CCEEEccccHHHHHhCCCCccCCCCCcccccCc
Q 022409 166 NKQFLSKVEEKLPKDTDLIVAC-QKGLRSLAAC----ELLYNAGY--RNLFWVQGGLEAAEEEDLVREGPQPLKFAGIGG 238 (297)
Q Consensus 166 ~~~f~~~~~~~l~kd~~IVvyC-~~G~RS~~aa----~~L~~~Gy--~nV~~L~GG~~aw~~~~lp~~~~~~~~~~~~~G 238 (297)
.+++...+.. .....||+|| .+|.||..++ ..|.+.|| ++|+.|+||+.+|...+.+... +..+..+.+
T Consensus 56 ~~~l~~~l~~--~~~~~vV~yC~~sg~rs~~aa~~~~~~L~~~G~~~~~v~~L~GG~~~W~~~g~~~~~--~~~yv~m~~ 131 (152)
T 2j6p_A 56 YEKLAKTLFE--EKKELAVFHCAQSLVRAPKGANRFALAQKKLGYVLPAVYVLRGGWEAFYHMYGDVRP--DLMYVKLGP 131 (152)
T ss_dssp HHHHHHHHHH--TTCCEEEEECSSSSSHHHHHHHHHHHHHHHHTCCCSEEEEETTHHHHHHHHHTTTCG--GGCEEEETT
T ss_pred HHHHHHHhcc--cCCCEEEEEcCCCCCccHHHHHHHHHHHHHcCCCCCCEEEEcCcHHHHHHHcCCCCC--CCeeEecCC
Confidence 1233333321 1223577789 7999999988 77888997 5899999999999998887753 455666766
Q ss_pred ccC
Q 022409 239 LSE 241 (297)
Q Consensus 239 ~t~ 241 (297)
.++
T Consensus 132 ~~~ 134 (152)
T 2j6p_A 132 EQK 134 (152)
T ss_dssp TTE
T ss_pred ccc
Confidence 653
No 27
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.80 E-value=9.5e-20 Score=170.84 Aligned_cols=117 Identities=13% Similarity=0.067 Sum_probs=94.2
Q ss_pred CcccCHHHHHHHhcCCCcEEEEeCChhh-hcccccCCeEecCCCCCcccccCCCCCccccccccCCccCCCCCcccc-HH
Q 022409 91 VKVLTPREAGYAVQLSSKTLLDVRPSTE-RKKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTLSYN-KQ 168 (297)
Q Consensus 91 ~~~Is~eel~~~l~~~~~vlIDVRs~~E-f~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~~~~~-~~ 168 (297)
...|+++|+.++++.++.+|||||++.| |..||||||+|||+........ ..+.+. .+
T Consensus 39 ~~~is~~~l~~~l~~~~~~iiDvR~~~e~y~~gHIpGAi~ip~~~~~~~~~--------------------~~~~~~~~~ 98 (318)
T 3hzu_A 39 ERLVTADWLSAHMGAPGLAIVESDEDVLLYDVGHIPGAVKIDWHTDLNDPR--------------------VRDYINGEQ 98 (318)
T ss_dssp GGEECHHHHHHHTTCTTEEEEECCSSTTSGGGCBCTTEEECCHHHHHBCSS--------------------SSSBCCHHH
T ss_pred CceecHHHHHHhccCCCEEEEECCCChhHHhcCcCCCCeEeCchhhhccCc--------------------ccCCCCHHH
Confidence 4579999999999877899999999987 9999999999999753211110 011223 34
Q ss_pred HHHHHHhc-CCCCCeEEEEeCCCC-cHHHHHHHHHHcCCCCEEEccccHHHHHhCCCCccC
Q 022409 169 FLSKVEEK-LPKDTDLIVACQKGL-RSLAACELLYNAGYRNLFWVQGGLEAAEEEDLVREG 227 (297)
Q Consensus 169 f~~~~~~~-l~kd~~IVvyC~~G~-RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~~~lp~~~ 227 (297)
|.+.+.+. ++++++|||||++|. ||..+++.|+.+||+||++|+||+.+|.++++|++.
T Consensus 99 ~~~~l~~lgi~~~~~vVvyc~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~ 159 (318)
T 3hzu_A 99 FAELMDRKGIARDDTVVIYGDKSNWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRETTL 159 (318)
T ss_dssp HHHHHHHTTCCTTCEEEEECSGGGHHHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBC
T ss_pred HHHHHHHcCCCCCCeEEEECCCCCccHHHHHHHHHHcCCCceEEccCCHHHHhhcCCCccc
Confidence 54555433 788999999999777 999999999999999999999999999999999964
No 28
>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1
Probab=99.80 E-value=2.8e-20 Score=157.28 Aligned_cols=109 Identities=16% Similarity=0.214 Sum_probs=86.8
Q ss_pred CCCcccCHHHHHHHhcC------CCcEEEEeCChhhhcccccCCeEecCCCCCcccccCCCCCccccccccCCccCCCCC
Q 022409 89 GKVKVLTPREAGYAVQL------SSKTLLDVRPSTERKKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPT 162 (297)
Q Consensus 89 ~~~~~Is~eel~~~l~~------~~~vlIDVRs~~Ef~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~ 162 (297)
..++.|+++|+.++++. ++.+|||||++.||..||||||+|||+..+.++..
T Consensus 20 ~~~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~e~~~ghIpgAinip~~~~~~~~~---------------------- 77 (161)
T 1c25_A 20 QDLKYISPEIMASVLNGKFANLIKEFVIIDCRYPYEYEGGHIKGAVNLHMEEEVEDFL---------------------- 77 (161)
T ss_dssp TTSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSHHHHHHHT----------------------
T ss_pred CCcceeCHHHHHHHHhccccccCCCeEEEECCChHHccCCcccCcEeCChhHHHHHHH----------------------
Confidence 45788999999998875 36899999999999999999999999765432210
Q ss_pred ccccHHHHHHHHhcCCCCCeE--EEEeC-CCCcHHHHHHHHHHc----------CCCCEEEccccHHHHHhCCCCccC
Q 022409 163 LSYNKQFLSKVEEKLPKDTDL--IVACQ-KGLRSLAACELLYNA----------GYRNLFWVQGGLEAAEEEDLVREG 227 (297)
Q Consensus 163 ~~~~~~f~~~~~~~l~kd~~I--VvyC~-~G~RS~~aa~~L~~~----------Gy~nV~~L~GG~~aw~~~~lp~~~ 227 (297)
.......+++++| |+||+ +|.||..++..|++. ||+||+.|+||+.+|.+.+.|+..
T Consensus 78 --------~~~~~~~~~~~~ivvv~yC~~sg~rs~~aa~~L~~~~~~~~~l~~~G~~~v~~l~GG~~~W~~~~~~~~~ 147 (161)
T 1c25_A 78 --------LKKPIVPTDGKRVIVVFHCEFSSERGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKCQSYCE 147 (161)
T ss_dssp --------TTSCCCCCTTSEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSSCCEEEETTHHHHHHHHHGGGEE
T ss_pred --------hhhhhccCCCCCeEEEEEcCCCCcchHHHHHHHHHHHHhhhhccccCCceEEEEcCCHHHHHHHcccccC
Confidence 0000012467786 67899 999999999999874 999999999999999999888753
No 29
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.80 E-value=8e-20 Score=167.14 Aligned_cols=111 Identities=19% Similarity=0.266 Sum_probs=84.5
Q ss_pred ccCHHHHHHHhcCCCcEEEEeCChhhh-----------cccccCCeEecCCCCCcccccCCCCCccccccccCCccCCCC
Q 022409 93 VLTPREAGYAVQLSSKTLLDVRPSTER-----------KKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVP 161 (297)
Q Consensus 93 ~Is~eel~~~l~~~~~vlIDVRs~~Ef-----------~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~ 161 (297)
.|+++|+.++++.++.+|||||++.|| ..||||||+|||+..+.+. ++
T Consensus 153 ~i~~~e~~~~~~~~~~~liDvR~~~e~~G~~~~~~~~~~~ghIpgA~nip~~~~~~~---~~------------------ 211 (280)
T 1urh_A 153 VVKVTDVLLASHENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVRE---GE------------------ 211 (280)
T ss_dssp BCCHHHHHHHHHHTCSEEEECSCHHHHSSCCCC----CCSSSCTTCEECCGGGGBSS---SS------------------
T ss_pred EEcHHHHHHHhcCCCcEEEeCCchhhcccccCCCCCCCcCccCCCceEeeHHHhhcC---Cc------------------
Confidence 499999999887678899999999999 6899999999998776541 11
Q ss_pred CccccHHHHHHHHh--cCCCCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHHHHHh-CCCCcc
Q 022409 162 TLSYNKQFLSKVEE--KLPKDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLEAAEE-EDLVRE 226 (297)
Q Consensus 162 ~~~~~~~f~~~~~~--~l~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~-~~lp~~ 226 (297)
.+.++.+++... .++++++||+||++|.||..++..|+.+||+||++|+||+.+|.. .++|++
T Consensus 212 --~~~~~~l~~~~~~~~~~~~~~ivv~C~~G~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~Pv~ 277 (280)
T 1urh_A 212 --LKTTDELDAIFFGRGVSYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVE 277 (280)
T ss_dssp --BCCHHHHHHHHHTTTCCSSSCEEEECCSSSTHHHHHHHHHHTTCSSCEEECCSCCC----------
T ss_pred --cCCHHHHHHHHHHcCCCCCCCEEEECChHHHHHHHHHHHHHcCCCCceeeCChHHHHhcCCCCCce
Confidence 122333333332 467899999999999999999999999999999999999999987 488876
No 30
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.80 E-value=1.8e-19 Score=166.53 Aligned_cols=114 Identities=18% Similarity=0.151 Sum_probs=93.5
Q ss_pred cccCHHHHHHHhcCCCcEEEEeCChhhh------------cccccCCeEecCCCCCcccccCCCCCccccccccCCccCC
Q 022409 92 KVLTPREAGYAVQLSSKTLLDVRPSTER------------KKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSG 159 (297)
Q Consensus 92 ~~Is~eel~~~l~~~~~vlIDVRs~~Ef------------~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G 159 (297)
..|+++|+.++++.++.+|||||++.|| ..||||||+|||+..+.+.. ++
T Consensus 160 ~~i~~~e~~~~~~~~~~~liDvR~~~e~~G~~~~~~~~~~~~ghIpgA~nip~~~l~~~~--~~---------------- 221 (296)
T 1rhs_A 160 LLKTYEQVLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTED--GF---------------- 221 (296)
T ss_dssp GEECHHHHHHHHHHCCSEEEECSCHHHHHTSSCCSSSSSCCCCEETTCEECCGGGGBCTT--SC----------------
T ss_pred eEEcHHHHHHHhcCCCceEEeCCchhhcccccCCcccCCCcCccCCCCEeecHHHhcCCC--Cc----------------
Confidence 5789999999887678899999999999 88999999999987664321 11
Q ss_pred CCCccccHHHHHH-HHh-cCCCCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHHHHHh-CCCCccC
Q 022409 160 VPTLSYNKQFLSK-VEE-KLPKDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLEAAEE-EDLVREG 227 (297)
Q Consensus 160 ~~~~~~~~~f~~~-~~~-~l~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~-~~lp~~~ 227 (297)
.+.++.+++ +.+ .++++++||+||++|.||..++..|+.+||+||++|+||+.+|.. .++|++.
T Consensus 222 ----~~~~~~l~~~~~~~~~~~~~~ivv~C~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~pv~~ 288 (296)
T 1rhs_A 222 ----EKSPEELRAMFEAKKVDLTKPLIATCRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHRAPPETWV 288 (296)
T ss_dssp ----BCCHHHHHHHHHHTTCCTTSCEEEECSSSSTHHHHHHHHHHTTCCCCEEESSHHHHHHHHSCGGGEE
T ss_pred ----CCCHHHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCCCceeeCCcHHHHhcCCCCCccc
Confidence 122333333 332 368899999999999999999999999999999999999999988 7888864
No 31
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.79 E-value=2.9e-19 Score=163.02 Aligned_cols=116 Identities=12% Similarity=0.049 Sum_probs=92.2
Q ss_pred cccCHHHHHHHhcCCCcEEEEeCC-hhhhcccccCCeEecCCCCCcccccCCCCCccccccccCCccCCCCCccccH-HH
Q 022409 92 KVLTPREAGYAVQLSSKTLLDVRP-STERKKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTLSYNK-QF 169 (297)
Q Consensus 92 ~~Is~eel~~~l~~~~~vlIDVRs-~~Ef~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~~~~~~-~f 169 (297)
..|+++++.++++.++.+|||||+ +.||..||||||+|+|+..+..... ..+...+ +|
T Consensus 6 ~~is~~~l~~~l~~~~~~liDvR~~~~ey~~ghIpgA~~ip~~~~~~~~~--------------------~~~~~~~~~~ 65 (277)
T 3aay_A 6 VLVSADWAESNLHAPKVVFVEVDEDTSAYDRDHIAGAIKLDWRTDLQDPV--------------------KRDFVDAQQF 65 (277)
T ss_dssp HEECHHHHHTTTTCTTEEEEEEESSSHHHHHCBSTTCEEEETTTTTBCSS--------------------SSSBCCHHHH
T ss_pred ceEcHHHHHHHhCCCCEEEEEcCCChhhHhhCCCCCcEEecccccccCCC--------------------CCCCCCHHHH
Confidence 469999999988777889999998 8999999999999999875432110 0111223 34
Q ss_pred HHHHHh-cCCCCCeEEEEeCCCC-cHHHHHHHHHHcCCCCEEEccccHHHHHhCCCCccC
Q 022409 170 LSKVEE-KLPKDTDLIVACQKGL-RSLAACELLYNAGYRNLFWVQGGLEAAEEEDLVREG 227 (297)
Q Consensus 170 ~~~~~~-~l~kd~~IVvyC~~G~-RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~~~lp~~~ 227 (297)
.+.+.. .++++++|||||.+|. +|..+++.|+.+||+||++|+||+.+|.+.++|++.
T Consensus 66 ~~~~~~~gi~~~~~vvvyc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 125 (277)
T 3aay_A 66 SKLLSERGIANEDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKWELDGRPLSS 125 (277)
T ss_dssp HHHHHHHTCCTTSEEEEECSGGGHHHHHHHHHHHHTTCCSEEEETTHHHHHHHTTCCCBC
T ss_pred HHHHHHcCCCCCCeEEEECCCCCchHHHHHHHHHHcCCCcEEEecCCHHHHHHcCCcccc
Confidence 444432 2788999999999765 799999999999999999999999999999999864
No 32
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.79 E-value=1.2e-19 Score=168.77 Aligned_cols=112 Identities=15% Similarity=0.149 Sum_probs=91.7
Q ss_pred ccCHHHHHHHhcCCCcEEEEeCChhhh-----------cccccCCeEecCCCCCcccccCCCCCccccccccCCccCCCC
Q 022409 93 VLTPREAGYAVQLSSKTLLDVRPSTER-----------KKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVP 161 (297)
Q Consensus 93 ~Is~eel~~~l~~~~~vlIDVRs~~Ef-----------~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~ 161 (297)
.++++|+.++++.++.+|||||++.|| ..||||||+|||+..+.+.. ++
T Consensus 176 ~i~~~e~~~~~~~~~~~liDvR~~~ef~G~~~~p~~~~~~GhIpGAiniP~~~l~~~~--~~------------------ 235 (302)
T 3olh_A 176 IKTYEDIKENLESRRFQVVDSRATGRFRGTEPEPRDGIEPGHIPGTVNIPFTDFLSQE--GL------------------ 235 (302)
T ss_dssp EECHHHHHHHHHHCCSEEEECSCHHHHHTSSCCSSTTCCCCCCTTCEECCGGGGBCSS--SC------------------
T ss_pred eecHHHHHHhhcCCCcEEEecCCHHHccccccCCCcCCcCccCCCceecCHHHhcCCC--Cc------------------
Confidence 588999998887778899999999999 78999999999987765431 11
Q ss_pred CccccHHHHHHHHh-cCCCCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHHHHHhCCCCc
Q 022409 162 TLSYNKQFLSKVEE-KLPKDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLEAAEEEDLVR 225 (297)
Q Consensus 162 ~~~~~~~f~~~~~~-~l~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~~~lp~ 225 (297)
+....++.+.+.+ .++++++||+||++|.||..++..|+.+||+||+.|+|||.+|...++|.
T Consensus 236 -~~~~~~l~~~~~~~~~~~~~~iv~yC~sG~rs~~a~~~L~~~G~~~v~~~~Gg~~~W~~~~~P~ 299 (302)
T 3olh_A 236 -EKSPEEIRHLFQEKKVDLSKPLVATCGSGVTACHVALGAYLCGKPDVPIYDGSWVEWYMRARPE 299 (302)
T ss_dssp -BCCHHHHHHHHHHTTCCTTSCEEEECSSSSTTHHHHHHHHTTTCCCCCEESSHHHHHHHHHCCC
T ss_pred -cCCHHHHHHHHHhcCCCCCCCEEEECCChHHHHHHHHHHHHcCCCCeeEeCCcHHHHhhccCCC
Confidence 1122334344443 47889999999999999999999999999999999999999999987764
No 33
>2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens}
Probab=99.79 E-value=7.3e-20 Score=149.88 Aligned_cols=112 Identities=19% Similarity=0.258 Sum_probs=79.2
Q ss_pred cccCHHHHHH--------HhcCCCcEEEEeCChhhhcccccCCeEecCCCCCccc--ccCCCCCccccccccCCccCCCC
Q 022409 92 KVLTPREAGY--------AVQLSSKTLLDVRPSTERKKAWIKGSIWIPIFDIDDT--FDAGSLPQKVTNFVMGGWWSGVP 161 (297)
Q Consensus 92 ~~Is~eel~~--------~l~~~~~vlIDVRs~~Ef~~ghIpGAinIPl~~~~e~--~~~gtl~k~~~~~~~~~~w~G~~ 161 (297)
+.|+++|+.+ +++.++.+|||||++.||..||||||+|+|+..+... ...+.
T Consensus 1 k~Is~~~l~~~l~~~~~~~l~~~~~~iiDvR~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~------------------ 62 (142)
T 2ouc_A 1 KIIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGAVHINCADKISRRRLQQGK------------------ 62 (142)
T ss_dssp CEECHHHHHHHHHC----------CEEEECSCHHHHHHEEETTCEECCCSSHHHHHHHHTTS------------------
T ss_pred CccCHHHHHHHHHhcccccCCCCCCEEEEeCCHHHhhhhhccCccccCccHHHHHHHhhcCC------------------
Confidence 4588999988 5555678999999999999999999999998764321 10010
Q ss_pred CccccHHHHHH------HHhcCCCCCeEEEEeCCCCcH---------HHHHHHHHHcCCCCEEEccccHHHHHhCCCCcc
Q 022409 162 TLSYNKQFLSK------VEEKLPKDTDLIVACQKGLRS---------LAACELLYNAGYRNLFWVQGGLEAAEEEDLVRE 226 (297)
Q Consensus 162 ~~~~~~~f~~~------~~~~l~kd~~IVvyC~~G~RS---------~~aa~~L~~~Gy~nV~~L~GG~~aw~~~~lp~~ 226 (297)
...++++.. .. .. ++++|||||++|.|+ ..++..|...|| ||+.|+||+.+|.+.+.++.
T Consensus 63 --~~~~~~~~~~~~~~~~~-~~-~~~~ivvyc~~g~~~~~~~~~~~~~~~~~~L~~~G~-~v~~l~GG~~~w~~~g~~~~ 137 (142)
T 2ouc_A 63 --ITVLDLISCREGKDSFK-RI-FSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQNHENLC 137 (142)
T ss_dssp --SCHHHHHHTTSCTTHHH-HH-HHSCEEEECSSCCCGGGCCTTSHHHHHHHHHHHTTC-CCEEETTHHHHHTTTCGGGE
T ss_pred --cchhhhCCChhhhHHHh-cc-CCCcEEEEECCCCchhhcCcccHHHHHHHHHHHcCC-cEEEEccCHHHHHHHCHHhh
Confidence 011222210 00 00 257999999999885 568888999999 89999999999999988774
No 34
>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A
Probab=99.79 E-value=5.3e-20 Score=154.17 Aligned_cols=116 Identities=12% Similarity=0.099 Sum_probs=84.5
Q ss_pred CcccCHHHHHHHhcC--CCcEEEEeCChhhhcccccCCeEecCCCCCc-ccccCCCCCccccccccCCccCCCCCccccH
Q 022409 91 VKVLTPREAGYAVQL--SSKTLLDVRPSTERKKAWIKGSIWIPIFDID-DTFDAGSLPQKVTNFVMGGWWSGVPTLSYNK 167 (297)
Q Consensus 91 ~~~Is~eel~~~l~~--~~~vlIDVRs~~Ef~~ghIpGAinIPl~~~~-e~~~~gtl~k~~~~~~~~~~w~G~~~~~~~~ 167 (297)
.+.|+++|+.++++. ++.+|||||++.||+.||||||+|||+..+. .+...+.+ ...
T Consensus 3 ~~~Is~~~l~~~l~~~~~~~~iiDvR~~~ey~~gHIpgAinip~~~l~~~~~~~~~~--------------------~~~ 62 (153)
T 2vsw_A 3 GTQIVTERLVALLESGTEKVLLIDSRPFVEYNTSHILEAININCSKLMKRRLQQDKV--------------------LIT 62 (153)
T ss_dssp CEEECHHHHHHHHTSTTCCEEEEECSCHHHHHHCEETTCEECCCCHHHHHHHHTTSS--------------------CHH
T ss_pred CccccHHHHHHHHhcCCCCEEEEECCCHHHhccCccCCCeeeChHHHHHhhhhcCCc--------------------CHH
Confidence 367999999998863 5789999999999999999999999987652 21110100 011
Q ss_pred HHH-HHHHh--cCCCCCeEEEEeCCCCcHHHH------HHHHHH--cCCCCEEEccccHHHHHhCCCCcc
Q 022409 168 QFL-SKVEE--KLPKDTDLIVACQKGLRSLAA------CELLYN--AGYRNLFWVQGGLEAAEEEDLVRE 226 (297)
Q Consensus 168 ~f~-~~~~~--~l~kd~~IVvyC~~G~RS~~a------a~~L~~--~Gy~nV~~L~GG~~aw~~~~lp~~ 226 (297)
+++ ..+.+ .++++++|||||++|.|+..+ +..|+. .||+||+.|+||+.+|.+...++.
T Consensus 63 ~ll~~~~~~~~~~~~~~~iVvyc~~g~~s~~a~~~~~~~~~L~~l~~G~~~v~~L~GG~~~W~~~~~~~~ 132 (153)
T 2vsw_A 63 ELIQHSAKHKVDIDCSQKVVVYDQSSQDVASLSSDCFLTVLLGKLEKSFNSVHLLAGGFAEFSRCFPGLC 132 (153)
T ss_dssp HHHHHSCSSCCCCCTTSEEEEECSSCCCGGGSCTTSHHHHHHHHHHHHCSCEEEETTHHHHHHHHCGGGE
T ss_pred HhcCchhhhhhccCCCCeEEEEeCCCCcccccccchHHHHHHHHHHhCCCcEEEEeChHHHHHHhChhhh
Confidence 111 00011 246788999999999998766 577774 499999999999999998755553
No 35
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.79 E-value=8e-19 Score=162.21 Aligned_cols=119 Identities=15% Similarity=0.151 Sum_probs=95.0
Q ss_pred CcccCHHHHHHHhcC----CCcEEEEeC--------ChhhhcccccCCeEecCCCCCcccccCCCCCccccccccCCccC
Q 022409 91 VKVLTPREAGYAVQL----SSKTLLDVR--------PSTERKKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWS 158 (297)
Q Consensus 91 ~~~Is~eel~~~l~~----~~~vlIDVR--------s~~Ef~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~ 158 (297)
.+.|+++++.++++. ++.+||||| ++.||..||||||+|+|+..+.+...
T Consensus 7 ~~~is~~~l~~~l~~~~~~~~~~liDvR~~~~~~~~~~~ey~~gHIpGAi~ip~~~l~~~~~------------------ 68 (296)
T 1rhs_A 7 RALVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEYLERHVPGASFFDIEECRDKAS------------------ 68 (296)
T ss_dssp CSEECHHHHHHHHHTTCCBTTEEEEECCCCCTTSCCHHHHHHHSBCTTCEECCTTTSSCTTS------------------
T ss_pred CceeeHHHHHHHHhccccCCCeEEEEecccCcCCcchhhhHhhCcCCCCEEeCHHHhcCCCC------------------
Confidence 468999999999876 578999999 68999999999999999876654321
Q ss_pred CCCCccccH-HHHHHHHh-cCCCCCeEEEEeCC--CCc-HHHHHHHHHHcCCCCEEEccccHHHHHhCCCCccC
Q 022409 159 GVPTLSYNK-QFLSKVEE-KLPKDTDLIVACQK--GLR-SLAACELLYNAGYRNLFWVQGGLEAAEEEDLVREG 227 (297)
Q Consensus 159 G~~~~~~~~-~f~~~~~~-~l~kd~~IVvyC~~--G~R-S~~aa~~L~~~Gy~nV~~L~GG~~aw~~~~lp~~~ 227 (297)
+...+.+.+ +|.+.+.. .++++++|||||.+ |.| +..+++.|+.+||+||+.|+||+.+|.+.++|++.
T Consensus 69 ~~~~~lp~~~~~~~~l~~lgi~~~~~vVvyc~~~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~ 142 (296)
T 1rhs_A 69 PYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTS 142 (296)
T ss_dssp SSSSCCCCHHHHHHHHHHTTCCTTCEEEEECCCSSSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBC
T ss_pred CCCCCCCCHHHHHHHHHHcCCCCCCeEEEEcCCCCCcchHHHHHHHHHHcCCCcEEEcCCCHHHHHHcCCcccc
Confidence 112222333 44444443 26789999999998 886 78999999999999999999999999999999864
No 36
>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A
Probab=99.79 E-value=3.8e-19 Score=152.46 Aligned_cols=107 Identities=17% Similarity=0.238 Sum_probs=83.7
Q ss_pred CCCcccCHHHHHHHhcC------CCcEEEEeCChhhhcccccCCeEecCCCCCcccccCCCCCccccccccCCccCCCCC
Q 022409 89 GKVKVLTPREAGYAVQL------SSKTLLDVRPSTERKKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPT 162 (297)
Q Consensus 89 ~~~~~Is~eel~~~l~~------~~~vlIDVRs~~Ef~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~ 162 (297)
..++.|+++++.++++. ++.+|||||++.||+.||||||+|||+..+.++.
T Consensus 21 ~~~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~ey~~ghIpgAinip~~~l~~~~----------------------- 77 (175)
T 2a2k_A 21 QDLKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAVNLPLERDAESF----------------------- 77 (175)
T ss_dssp TTSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSHHHHHHH-----------------------
T ss_pred CCCceeCHHHHHHHHhcccccCCCCEEEEECCCHHHHcCCcCCCcEECChhHHHHHh-----------------------
Confidence 45788999999998875 3689999999999999999999999976543210
Q ss_pred ccccHHHHHHHHhcC--CCCCeEEE--EeC-CCCcHHHHHHHHHH----------cCCCCEEEccccHHHHHhCCCCcc
Q 022409 163 LSYNKQFLSKVEEKL--PKDTDLIV--ACQ-KGLRSLAACELLYN----------AGYRNLFWVQGGLEAAEEEDLVRE 226 (297)
Q Consensus 163 ~~~~~~f~~~~~~~l--~kd~~IVv--yC~-~G~RS~~aa~~L~~----------~Gy~nV~~L~GG~~aw~~~~lp~~ 226 (297)
+.. ...+ +++++||| ||+ +|.||..++..|++ +||+||++|+||+.+|.+.+.|+.
T Consensus 78 -------~~~-~~~~~~~~~~~ivvv~yC~~~g~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~~~~~~ 148 (175)
T 2a2k_A 78 -------LLK-SPIAPCSLDKRVILIFHSEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNFC 148 (175)
T ss_dssp -------HHS-SCCCC----CEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGE
T ss_pred -------hhh-hhhccccCCCCeEEEEECCCCCCccHHHHHHHHHhhhhhhhhhhcCCceEEEEcCCHHHHHHHCcccc
Confidence 000 0012 36788755 699 99999999999986 499999999999999999988874
No 37
>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A
Probab=99.78 E-value=6e-19 Score=156.41 Aligned_cols=108 Identities=19% Similarity=0.280 Sum_probs=87.3
Q ss_pred CCCcccCHHHHHHHhcCC------CcEEEEeCChhhhcccccCCeEecCCCCCcccccCCCCCccccccccCCccCCCCC
Q 022409 89 GKVKVLTPREAGYAVQLS------SKTLLDVRPSTERKKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPT 162 (297)
Q Consensus 89 ~~~~~Is~eel~~~l~~~------~~vlIDVRs~~Ef~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~ 162 (297)
..++.|+++|+.++++.+ +.+|||||++.||+.||||||+|||+..+.+.
T Consensus 41 ~~~~~Is~~el~~~l~~~~~~~~~~~~lIDvR~~~Ey~~gHIpGAinip~~~l~~~------------------------ 96 (211)
T 1qb0_A 41 QDLKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAVNLPLERDAES------------------------ 96 (211)
T ss_dssp TTSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCEECCSHHHHHH------------------------
T ss_pred CCCCeeCHHHHHHHHhcccccCCCCEEEEECCCHHHHccCcCCCCEECCchHHHHH------------------------
Confidence 457889999999988753 68999999999999999999999997643321
Q ss_pred ccccHHHHHHHHhcCC--CCCeE--EEEeC-CCCcHHHHHHHHHH----------cCCCCEEEccccHHHHHhCCCCccC
Q 022409 163 LSYNKQFLSKVEEKLP--KDTDL--IVACQ-KGLRSLAACELLYN----------AGYRNLFWVQGGLEAAEEEDLVREG 227 (297)
Q Consensus 163 ~~~~~~f~~~~~~~l~--kd~~I--VvyC~-~G~RS~~aa~~L~~----------~Gy~nV~~L~GG~~aw~~~~lp~~~ 227 (297)
++... ..++ ++++| |+||+ +|.||..++..|++ +||+||+.|+||+.+|.+.+.++..
T Consensus 97 ------~~~~~-~~l~~~~d~~ivvVvyC~~sG~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~g~~~~~ 169 (211)
T 1qb0_A 97 ------FLLKS-PIAPCSLDKRVILIFHCEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNFCE 169 (211)
T ss_dssp ------HHHTT-TCCCSSTTSEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEE
T ss_pred ------hhhhh-hhccccCCCCeEEEEECCCCCccHHHHHHHHHhhhhhhhhhhhcCCCeEEEECCHHHHHHHHCccccC
Confidence 00000 1233 67887 88999 99999999999986 6999999999999999999888853
No 38
>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}
Probab=99.78 E-value=2.6e-19 Score=160.15 Aligned_cols=106 Identities=17% Similarity=0.218 Sum_probs=81.8
Q ss_pred CCCcccCHHHHHHHhcCC------CcEEEEeCChhhhcccccCCeEecCCCC-Cccccc-CCCCCccccccccCCccCCC
Q 022409 89 GKVKVLTPREAGYAVQLS------SKTLLDVRPSTERKKAWIKGSIWIPIFD-IDDTFD-AGSLPQKVTNFVMGGWWSGV 160 (297)
Q Consensus 89 ~~~~~Is~eel~~~l~~~------~~vlIDVRs~~Ef~~ghIpGAinIPl~~-~~e~~~-~gtl~k~~~~~~~~~~w~G~ 160 (297)
..++.|+++++.++++.+ +.+|||||++.||+.||||||+|||+.. +.+... .+.
T Consensus 54 ~~~~~Is~~eL~~~l~~~~~~~~~~~~lIDVR~~~Ey~~GHIpGAinIP~~~~l~~~l~~~~~----------------- 116 (216)
T 3op3_A 54 QDLKYVNPETVAALLSGKFQGLIEKFYVIDCRYPYEYLGGHIQGALNLYSQEELFNFFLKKPI----------------- 116 (216)
T ss_dssp SSSEEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTSEETTCEECCSHHHHHHHHTSSCC-----------------
T ss_pred CCCCEeCHHHHHHHHhCCCccccCCEEEEEeCcHHHHhcCCccCCEECChHHHHHHHHhhccc-----------------
Confidence 457899999999999765 6899999999999999999999999753 111100 000
Q ss_pred CCccccHHHHHHHHhcCCCCC--eEEEEeC-CCCcHHHHHHHHHHc----------CCCCEEEccccHHHHHhCCCCc
Q 022409 161 PTLSYNKQFLSKVEEKLPKDT--DLIVACQ-KGLRSLAACELLYNA----------GYRNLFWVQGGLEAAEEEDLVR 225 (297)
Q Consensus 161 ~~~~~~~~f~~~~~~~l~kd~--~IVvyC~-~G~RS~~aa~~L~~~----------Gy~nV~~L~GG~~aw~~~~lp~ 225 (297)
...++++ +|||||. +|.||..++..|++. ||++||+|+|||.+|.++..++
T Consensus 117 --------------~~~~~~k~~~VVvyC~~SG~Rs~~aa~~L~~~~~~~~~y~~lGf~~V~~L~GG~~aW~~~~~~l 180 (216)
T 3op3_A 117 --------------VPLDTQKRIIIVFHCEFSSERGPRMCRCLREEDRSLNQYPALYYPELYILKGGYRDFFPEYMEL 180 (216)
T ss_dssp --------------CCSSTTSEEEEEEECCC--CCHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGG
T ss_pred --------------cccccCCCCEEEEEeCCCChHHHHHHHHHHHcCcccccccccCCCcEEEECCcHHHHHHhCccc
Confidence 0112344 4999999 999999999999987 8999999999999999875554
No 39
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.78 E-value=1.4e-18 Score=161.60 Aligned_cols=120 Identities=14% Similarity=0.117 Sum_probs=94.5
Q ss_pred CCcccCHHHHHHHhcCC----CcEEEEeC---------ChhhhcccccCCeEecCCCCCcccccCCCCCccccccccCCc
Q 022409 90 KVKVLTPREAGYAVQLS----SKTLLDVR---------PSTERKKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGW 156 (297)
Q Consensus 90 ~~~~Is~eel~~~l~~~----~~vlIDVR---------s~~Ef~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~ 156 (297)
.-..|+++++.++++.+ +.+||||| ++.||..||||||+|||+..+.+..
T Consensus 20 ~~~lIs~~~l~~~l~~~~~~~~~~ilDvR~~~~~~~~~~~~ey~~gHIpGAi~i~~~~~~~~~----------------- 82 (302)
T 3olh_A 20 FQSMVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDRT----------------- 82 (302)
T ss_dssp CCCEECHHHHHHHHHCCCSSCCEEEEECCCCCCC--CCHHHHHHHSCCTTCEECCTTTSSCSS-----------------
T ss_pred CCCccCHHHHHHHhcCcCCCCCEEEEEeecCCCccCcccHHHHhhCcCCCCeEeCHHHhcCcC-----------------
Confidence 34679999999998764 88999999 7899999999999999987654321
Q ss_pred cCCCCCccccH-HHHHHHHhc-CCCCCeEEEEeC---CCCcHHHHHHHHHHcCCCCEEEccccHHHHHhCCCCccC
Q 022409 157 WSGVPTLSYNK-QFLSKVEEK-LPKDTDLIVACQ---KGLRSLAACELLYNAGYRNLFWVQGGLEAAEEEDLVREG 227 (297)
Q Consensus 157 w~G~~~~~~~~-~f~~~~~~~-l~kd~~IVvyC~---~G~RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~~~lp~~~ 227 (297)
..++.+.+.+ +|.+.+.+. ++++++|||||+ ++.+|..+++.|+.+||+||++|+||+.+|.++++|++.
T Consensus 83 -~~~~~~lp~~~~~~~~~~~lgi~~~~~VVvyc~~~~g~~~a~ra~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~ 157 (302)
T 3olh_A 83 -SPYDHMLPGAEHFAEYAGRLGVGAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLLDGGLRHWLRQNLPLSS 157 (302)
T ss_dssp -CSSSSCCCCHHHHHHHHHHTTCCSSCEEEEECCCTTSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHSCCC-CC
T ss_pred -CCCCCCCCCHHHHHHHHHHcCCCCCCEEEEEeCCCCCcchHHHHHHHHHHcCCCcEEECCCCHHHHHHcCCCccc
Confidence 1223333333 454444432 578999999996 445799999999999999999999999999999999864
No 40
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.78 E-value=6e-19 Score=161.56 Aligned_cols=113 Identities=20% Similarity=0.167 Sum_probs=91.3
Q ss_pred ccCHHHHHHHhc---CCCcEEEEeCChhhhc----------------ccccCCeEecCCCCCcccccCCCCCcccccccc
Q 022409 93 VLTPREAGYAVQ---LSSKTLLDVRPSTERK----------------KAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVM 153 (297)
Q Consensus 93 ~Is~eel~~~l~---~~~~vlIDVRs~~Ef~----------------~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~ 153 (297)
.|+++|+.++++ .++..|||||++.||. .||||||+|||+..+.+.. +
T Consensus 147 ~i~~~el~~~l~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~--~----------- 213 (285)
T 1uar_A 147 RAYRDDVLEHIIKVKEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNPD--G----------- 213 (285)
T ss_dssp EECHHHHHHHHHHHHTTSEEEEECSCHHHHHTCC--------CCCSCCSBCTTCEECCGGGGBCTT--S-----------
T ss_pred EEcHHHHHHHHhhcccCCCcEEEcCCccceeeeccccccccccccccCCcCCCccccCHHHhcCCC--C-----------
Confidence 499999999884 2345799999999997 8999999999987654321 1
Q ss_pred CCccCCCCCccccHHHHHHHHhc--CCCCCeEEEEeCCCCcHHHHHHHHH-HcCCCCEEEccccHHHHH-hCCCCccC
Q 022409 154 GGWWSGVPTLSYNKQFLSKVEEK--LPKDTDLIVACQKGLRSLAACELLY-NAGYRNLFWVQGGLEAAE-EEDLVREG 227 (297)
Q Consensus 154 ~~~w~G~~~~~~~~~f~~~~~~~--l~kd~~IVvyC~~G~RS~~aa~~L~-~~Gy~nV~~L~GG~~aw~-~~~lp~~~ 227 (297)
..+.++.+++.... ++++++|||||++|.||..++..|+ .+||+||++|+||+.+|. ..++|++.
T Consensus 214 ---------~~~~~~~l~~~~~~~g~~~~~~ivvyC~~G~rs~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~g~pv~~ 282 (285)
T 1uar_A 214 ---------TFKSAEELRALYEPLGITKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSWTEWGNLVGVPIAK 282 (285)
T ss_dssp ---------CBCCHHHHHHHHGGGTCCTTSEEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCBC
T ss_pred ---------cCCCHHHHHHHHHHcCCCCCCCEEEECCchHHHHHHHHHHHHHcCCCCcceeCchHHHHhcCCCCCccc
Confidence 11334444444434 7889999999999999999999999 999999999999999998 68898863
No 41
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.77 E-value=3.9e-19 Score=174.20 Aligned_cols=103 Identities=26% Similarity=0.340 Sum_probs=92.3
Q ss_pred CCCcccCHHHHHHHhcCCCcEEEEeCChhhhcccccCCeEecCCCCCcccccCCCCCccccccccCCccCCCCCccccHH
Q 022409 89 GKVKVLTPREAGYAVQLSSKTLLDVRPSTERKKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTLSYNKQ 168 (297)
Q Consensus 89 ~~~~~Is~eel~~~l~~~~~vlIDVRs~~Ef~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~~~~~~~ 168 (297)
...+.++++++.++++.++.+|||||++.||..||||||+|+|+..+.++.
T Consensus 371 ~~~~~i~~~~l~~~~~~~~~~lvDvR~~~e~~~ghIpgA~~ip~~~l~~~~----------------------------- 421 (474)
T 3tp9_A 371 ASYANVSPDEVRGALAQQGLWLLDVRNVDEWAGGHLPQAHHIPLSKLAAHI----------------------------- 421 (474)
T ss_dssp ECCEEECHHHHHHTTTTTCCEEEECSCHHHHHHCBCTTCEECCHHHHTTTG-----------------------------
T ss_pred ccccccCHHHHHHHhcCCCcEEEECCCHHHHhcCcCCCCEECCHHHHHHHH-----------------------------
Confidence 446789999999988777899999999999999999999999986655432
Q ss_pred HHHHHHhcCCCCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHHHHHhCCCCcc
Q 022409 169 FLSKVEEKLPKDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLEAAEEEDLVRE 226 (297)
Q Consensus 169 f~~~~~~~l~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~~~lp~~ 226 (297)
..++++++||+||++|.||..++..|+.+||+||+.|+||+.+|.+.++|++
T Consensus 422 ------~~l~~~~~vvv~C~~G~ra~~a~~~L~~~G~~~v~~~~Gg~~~W~~~g~p~~ 473 (474)
T 3tp9_A 422 ------HDVPRDGSVCVYCRTGGRSAIAASLLRAHGVGDVRNMVGGYEAWRGKGFPVE 473 (474)
T ss_dssp ------GGSCSSSCEEEECSSSHHHHHHHHHHHHHTCSSEEEETTHHHHHHHTTCCCB
T ss_pred ------hcCCCCCEEEEECCCCHHHHHHHHHHHHcCCCCEEEecChHHHHHhCCCCCC
Confidence 2567899999999999999999999999999999999999999999999875
No 42
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.77 E-value=3.7e-19 Score=162.90 Aligned_cols=117 Identities=15% Similarity=0.034 Sum_probs=92.8
Q ss_pred CcccCHHHHHHHhcCCCcEEEEeC-ChhhhcccccCCeEecCCCCCcccccCCCCCccccccccCCccCCCCCccccH-H
Q 022409 91 VKVLTPREAGYAVQLSSKTLLDVR-PSTERKKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTLSYNK-Q 168 (297)
Q Consensus 91 ~~~Is~eel~~~l~~~~~vlIDVR-s~~Ef~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~~~~~~-~ 168 (297)
...|+++++.++++.++.+||||| ++.||..||||||+|+|+..+.... ...+.+.+ +
T Consensus 7 ~~~is~~~l~~~l~~~~~~liDvR~~~~e~~~ghIpgA~~ip~~~~~~~~--------------------~~~~~~~~~~ 66 (285)
T 1uar_A 7 EVLVSTDWVQEHLEDPKVRVLEVDEDILLYDTGHIPGAQKIDWQRDFWDP--------------------VVRDFISEEE 66 (285)
T ss_dssp GGEECHHHHHTTTTCTTEEEEEECSSTTHHHHCBCTTCEEECHHHHHBCS--------------------SSSSBCCHHH
T ss_pred CceEcHHHHHHhcCCCCEEEEEcCCCcchhhcCcCCCCEECCchhhccCC--------------------cccCCCCHHH
Confidence 357999999998876788999999 7899999999999999976321110 01112223 4
Q ss_pred HHHHHHhc-CCCCCeEEEEeCCCC-cHHHHHHHHHHcCCCCEEEccccHHHHHhCCCCccC
Q 022409 169 FLSKVEEK-LPKDTDLIVACQKGL-RSLAACELLYNAGYRNLFWVQGGLEAAEEEDLVREG 227 (297)
Q Consensus 169 f~~~~~~~-l~kd~~IVvyC~~G~-RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~~~lp~~~ 227 (297)
|.+.+... ++++++|||||++|. ||..+++.|+.+||+||++|+||+.+|...++|++.
T Consensus 67 ~~~~~~~~gi~~~~~ivvyc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 127 (285)
T 1uar_A 67 FAKLMERLGISNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEEGRPLTT 127 (285)
T ss_dssp HHHHHHHTTCCTTCEEEEECHHHHHHHHHHHHHHHHTTCSCEEEETTHHHHHHHHTCCCBC
T ss_pred HHHHHHHcCCCCCCeEEEECCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCcccC
Confidence 44444432 688999999999887 799999999999999999999999999999999864
No 43
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.76 E-value=1.3e-18 Score=163.21 Aligned_cols=111 Identities=18% Similarity=0.162 Sum_probs=90.2
Q ss_pred ccCHHHHHHHhcCCCcEEEEeCChhhhcc----------------cccCCeEecCCCCCcccccCCCCCccccccccCCc
Q 022409 93 VLTPREAGYAVQLSSKTLLDVRPSTERKK----------------AWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGW 156 (297)
Q Consensus 93 ~Is~eel~~~l~~~~~vlIDVRs~~Ef~~----------------ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~ 156 (297)
.++++|+.++++.. +|||||++.||.. ||||||+|||+..+.+.. |
T Consensus 180 ~i~~~el~~~l~~~--~liDvR~~~e~~~~~~~~~~~~~~~~~~~GhIpGA~niP~~~~~~~~--g-------------- 241 (318)
T 3hzu_A 180 RAFRDDVLAILGAQ--PLIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPTAVHIPWGKAADES--G-------------- 241 (318)
T ss_dssp BCCHHHHHHHTTTS--CEEECSCHHHHHTSCSSCTTSCSCSCSSCSBCTTCEECCGGGGBCTT--S--------------
T ss_pred cccHHHHHHhhcCC--eEEecCCHHHhcccccCccccccccCCcCcCCCCeeecCHHHhcCCC--C--------------
Confidence 47899999988653 8999999999998 999999999987653221 1
Q ss_pred cCCCCCccccHHHHHHHHhcCCCCCeEEEEeCCCCcHHHHHHHHHH-cCCCCEEEccccHHHHHh-CCCCccC
Q 022409 157 WSGVPTLSYNKQFLSKVEEKLPKDTDLIVACQKGLRSLAACELLYN-AGYRNLFWVQGGLEAAEE-EDLVREG 227 (297)
Q Consensus 157 w~G~~~~~~~~~f~~~~~~~l~kd~~IVvyC~~G~RS~~aa~~L~~-~Gy~nV~~L~GG~~aw~~-~~lp~~~ 227 (297)
..+.++.+++....++++++||+||++|.||..++..|.+ +||+||++|+|||.+|.. .++|++.
T Consensus 242 ------~~~~~~~l~~~~~~l~~~~~ivvyC~sG~rs~~a~~~L~~~~G~~~v~~~~GG~~~W~~~~g~Pv~~ 308 (318)
T 3hzu_A 242 ------RFRSREELERLYDFINPDDQTVVYCRIGERSSHTWFVLTHLLGKADVRNYDGSWTEWGNAVRVPIVA 308 (318)
T ss_dssp ------CBCCHHHHHHHTTTCCTTCCCEEECSSSHHHHHHHHHHHHTSCCSSCEECTTHHHHHTTSTTCCCBC
T ss_pred ------cCCCHHHHHHHhcCCCCCCcEEEEcCChHHHHHHHHHHHHHcCCCCeeEeCCcHHHHhcCCCCCccc
Confidence 1123344444445688999999999999999999999997 999999999999999995 6899864
No 44
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.76 E-value=1.5e-18 Score=158.24 Aligned_cols=109 Identities=21% Similarity=0.210 Sum_probs=87.2
Q ss_pred cCHHHHHHHhcCCCcEEEEeCChhhhcc----------------cccCCeEecCCCCCcccccCCCCCccccccccCCcc
Q 022409 94 LTPREAGYAVQLSSKTLLDVRPSTERKK----------------AWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWW 157 (297)
Q Consensus 94 Is~eel~~~l~~~~~vlIDVRs~~Ef~~----------------ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w 157 (297)
++++|+.++++.++ |||||++.||.. ||||||+|||+..+.+.. +
T Consensus 146 ~~~~el~~~~~~~~--liDvR~~~e~~~~~~~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~--~--------------- 206 (277)
T 3aay_A 146 AFRDEVLAAINVKN--LIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANED--G--------------- 206 (277)
T ss_dssp ECHHHHHHTTTTSE--EEECSCHHHHHTSCCC-----CCCCSCCSBCTTCEECCGGGGBCTT--S---------------
T ss_pred cCHHHHHHhcCCCC--EEEeCChHHeeeeecccccccccccccCCcCCCceecCHHHhcCCC--C---------------
Confidence 78999998876544 999999999985 999999999987543210 1
Q ss_pred CCCCCccccH-HHHHHHHh-cCCCCCeEEEEeCCCCcHHHHHHHHHH-cCCCCEEEccccHHHHHh-CCCCcc
Q 022409 158 SGVPTLSYNK-QFLSKVEE-KLPKDTDLIVACQKGLRSLAACELLYN-AGYRNLFWVQGGLEAAEE-EDLVRE 226 (297)
Q Consensus 158 ~G~~~~~~~~-~f~~~~~~-~l~kd~~IVvyC~~G~RS~~aa~~L~~-~Gy~nV~~L~GG~~aw~~-~~lp~~ 226 (297)
..+.+ ++.+.+.+ .++++++||+||++|.||..++..|.+ +||+||++|+||+.+|.. .++|++
T Consensus 207 -----~~~~~~~l~~~~~~~~~~~~~~iv~yC~~G~rs~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~g~pv~ 274 (277)
T 3aay_A 207 -----TFKSDEELAKLYADAGLDNSKETIAYCRIGERSSHTWFVLRELLGHQNVKNYDGSWTEYGSLVGAPIE 274 (277)
T ss_dssp -----CBCCHHHHHHHHHHHTCCTTSCEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCB
T ss_pred -----cCCCHHHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHHHHHHcCCCcceeeCchHHHHhcCCCCCCc
Confidence 11223 33333433 478899999999999999999999996 999999999999999998 888886
No 45
>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*
Probab=99.75 E-value=4.8e-19 Score=152.30 Aligned_cols=113 Identities=22% Similarity=0.232 Sum_probs=84.5
Q ss_pred CCCcccCHHHHHHHhcCC-------CcEEEEeCChhhhcccccCCeEecCCCCCcccccCCCCCccccccccCCccCCCC
Q 022409 89 GKVKVLTPREAGYAVQLS-------SKTLLDVRPSTERKKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVP 161 (297)
Q Consensus 89 ~~~~~Is~eel~~~l~~~-------~~vlIDVRs~~Ef~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~ 161 (297)
..++.|+++|+.++++.+ +.+|||||+ .||..||||||+|||+..+.++.
T Consensus 28 ~~~~~Is~~eL~~~l~~~~~~~~~~~~~iIDVR~-~Ey~~GHIpGAiniP~~~l~~~~---------------------- 84 (169)
T 3f4a_A 28 TNVKYLDPTELHRWMQEGHTTTLREPFQVVDVRG-SDYMGGHIKDGWHYAYSRLKQDP---------------------- 84 (169)
T ss_dssp CSEEEECHHHHHHHHHHTSCTTTCCCEEEEECCS-TTCTTCEETTCEECCHHHHHHCH----------------------
T ss_pred CCCcEeCHHHHHHHHhcCCccCcCCCEEEEECCc-hHHccCcCCCCEECCHHHhhccc----------------------
Confidence 568899999999998643 489999999 99999999999999987654321
Q ss_pred CccccHHHHHHHHhc-C--CCCCeEEEEeCCC-CcHHHHHHHHHH----cC--CCCEEEccccHHHHHhCCCCcc
Q 022409 162 TLSYNKQFLSKVEEK-L--PKDTDLIVACQKG-LRSLAACELLYN----AG--YRNLFWVQGGLEAAEEEDLVRE 226 (297)
Q Consensus 162 ~~~~~~~f~~~~~~~-l--~kd~~IVvyC~~G-~RS~~aa~~L~~----~G--y~nV~~L~GG~~aw~~~~lp~~ 226 (297)
...+++.+.+... + ..+++|||||.+| .||..++..|.+ .| |.+|++|+||+.+|.+.+.+.+
T Consensus 85 --~~l~~l~~~~~~~~~~~~~~~~IVvyC~sG~~Rs~~aa~~l~~~L~~~G~~~~~V~~L~GG~~aW~~~~~~~~ 157 (169)
T 3f4a_A 85 --EYLRELKHRLLEKQADGRGALNVIFHCMLSQQRGPSAAMLLLRSLDTAELSRCRLWVLRGGFSRWQSVYGDDE 157 (169)
T ss_dssp --HHHHHHHHHHHHHHHTSSSCEEEEEECSSSSSHHHHHHHHHHHTCCHHHHTTEEEEEETTHHHHHHHHHTTCT
T ss_pred --ccHHHHHHHHHhhcccccCCCeEEEEeCCCCCcHHHHHHHHHHHHHHcCCCCCCEEEECCCHHHHHHHcCCcc
Confidence 0122333332211 1 1246999999976 899998877755 36 5789999999999999876654
No 46
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.75 E-value=3.1e-18 Score=152.62 Aligned_cols=99 Identities=28% Similarity=0.249 Sum_probs=82.9
Q ss_pred cccCHHHHHHHhcCCCcEEEEeCChhhhcc----------cccCCeEecCCCCCcccccCCCCCccccccccCCccCCCC
Q 022409 92 KVLTPREAGYAVQLSSKTLLDVRPSTERKK----------AWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVP 161 (297)
Q Consensus 92 ~~Is~eel~~~l~~~~~vlIDVRs~~Ef~~----------ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~ 161 (297)
..|+++|+.+ +.+|||||++.||.. ||||||+|+|+..+.+..
T Consensus 121 ~~i~~~e~~~-----~~~liDvR~~~e~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~---------------------- 173 (230)
T 2eg4_A 121 WLLTADEAAR-----HPLLLDVRSPEEFQGKVHPPCCPRGGRIPGSKNAPLELFLSPE---------------------- 173 (230)
T ss_dssp GBCCHHHHHT-----CSCEEECSCHHHHTTSCCCTTSSSCCBCTTCEECCGGGGGCCT----------------------
T ss_pred ceeCHHHHhh-----CCeEEeCCCHHHcCcccCCCCCccCCCCCCcEEcCHHHhCChH----------------------
Confidence 4578888864 678999999999999 999999999987654321
Q ss_pred CccccHHHHHHHHhcCCCCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHHHHHhCCCCcc
Q 022409 162 TLSYNKQFLSKVEEKLPKDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLEAAEEEDLVRE 226 (297)
Q Consensus 162 ~~~~~~~f~~~~~~~l~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~~~lp~~ 226 (297)
+.++. ..++++++||+||++|.||..++..|+++| +||+.|+||+.+|.+.++|++
T Consensus 174 ------e~~~~--~~~~~~~~iv~~C~~G~rs~~a~~~L~~~G-~~v~~~~Gg~~~W~~~g~p~~ 229 (230)
T 2eg4_A 174 ------GLLER--LGLQPGQEVGVYCHSGARSAVAFFVLRSLG-VRARNYLGSMHEWLQEGLPTE 229 (230)
T ss_dssp ------THHHH--HTCCTTCEEEEECSSSHHHHHHHHHHHHTT-CEEEECSSHHHHHHHTTCCCB
T ss_pred ------HHHHh--cCCCCCCCEEEEcCChHHHHHHHHHHHHcC-CCcEEecCcHHHHhhcCCCCC
Confidence 11111 146789999999999999999999999999 899999999999999998875
No 47
>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}
Probab=99.74 E-value=4.7e-18 Score=143.75 Aligned_cols=117 Identities=20% Similarity=0.274 Sum_probs=79.7
Q ss_pred CCCcccCHHHHHHHhc--------CCCcEEEEeCChhhhcccccCCeEecCCCCCc--ccccCCCCCccccccccCCccC
Q 022409 89 GKVKVLTPREAGYAVQ--------LSSKTLLDVRPSTERKKAWIKGSIWIPIFDID--DTFDAGSLPQKVTNFVMGGWWS 158 (297)
Q Consensus 89 ~~~~~Is~eel~~~l~--------~~~~vlIDVRs~~Ef~~ghIpGAinIPl~~~~--e~~~~gtl~k~~~~~~~~~~w~ 158 (297)
..++.|+++|+.++++ .++.+|||||++.||..||||||+|+|+..+. .+...+.+.... ....-.
T Consensus 8 ~~~~~is~~el~~~l~~~~~~~~~~~~~~liDvR~~~e~~~ghI~ga~~i~~~~l~~~~~~~~~~~~~~~----~~~~~~ 83 (158)
T 3tg1_B 8 ASIKIIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGAVHINCADKISRRRLQQGKITVLD----LISCRE 83 (158)
T ss_dssp ---CEECHHHHHHHHCC----------CEEEECSCHHHHHHCCBTTCEECCCSSHHHHHHHTTSSCCHHH----HTCCCC
T ss_pred CCCcEecHHHHHHHHHhcccccCCCCCEEEEEcCCHHHHHhCCCCCceeechhHHHHHhhhhcCcccHHh----hcCCHH
Confidence 5678999999999987 34789999999999999999999999998753 111111110000 000000
Q ss_pred CCCCccccHHHHHHHHhcCCCCCeEEEEeCCCC---------cHHHHHHHHHHcCCCCEEEccccHHHHHhCC
Q 022409 159 GVPTLSYNKQFLSKVEEKLPKDTDLIVACQKGL---------RSLAACELLYNAGYRNLFWVQGGLEAAEEED 222 (297)
Q Consensus 159 G~~~~~~~~~f~~~~~~~l~kd~~IVvyC~~G~---------RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~~~ 222 (297)
+. ..+ ...++++|||||.+|. +|..++..|.+.|| +|+.|+|||.+|....
T Consensus 84 ~~------~~~------~~~~~~~IVvyc~~g~~~~~~~~~~~s~~a~~~L~~~G~-~v~~L~GG~~~W~~~~ 143 (158)
T 3tg1_B 84 GK------DSF------KRIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQNH 143 (158)
T ss_dssp SS------CSS------TTTTTSCEEEECSCCSCTTSCCSSSHHHHHHHHHHTTTC-CEEEETTHHHHHTSSC
T ss_pred HH------HHH------hccCCCeEEEEECCCCcccccCcchHHHHHHHHHHhCCC-cEEEeCCcHHHHHHHh
Confidence 00 000 1124789999999884 59999999999999 6999999999997753
No 48
>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1
Probab=99.73 E-value=6e-19 Score=147.53 Aligned_cols=117 Identities=18% Similarity=0.162 Sum_probs=81.9
Q ss_pred CCCcccCHHHHHHHhcCC--CcEEEEeCChhhhcccccCCeEecCCCCCccc-ccCCCCCccccccccCCccCCCCCccc
Q 022409 89 GKVKVLTPREAGYAVQLS--SKTLLDVRPSTERKKAWIKGSIWIPIFDIDDT-FDAGSLPQKVTNFVMGGWWSGVPTLSY 165 (297)
Q Consensus 89 ~~~~~Is~eel~~~l~~~--~~vlIDVRs~~Ef~~ghIpGAinIPl~~~~e~-~~~gtl~k~~~~~~~~~~w~G~~~~~~ 165 (297)
.+...|+++++.++++.+ +.+|||||++.||+.||||||+|||+..+..+ ...+. ..+....+
T Consensus 13 ~~~~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHIpgAinip~~~~~~~~~~~~~--------------~~~~~~l~ 78 (154)
T 1hzm_A 13 EMAISKTVAWLNEQLELGNERLLLMDCRPQELYESSHIESAINVAIPGIMLRRLQKGN--------------LPVRALFT 78 (154)
T ss_dssp CCSSBSCCCCHHHHHHHCSSSCEEECCSTTHHHHHHTSSSCCCCCCSSHHHHTBCCSC--------------CCTTTTST
T ss_pred ccccccCHHHHHHHHhCCCCCEEEEEcCCHHHHhhccccCceEeCccHHHHhhhhcCc--------------ccHHHhCC
Confidence 356789999998888654 78999999999999999999999998764310 00000 00001111
Q ss_pred cHHHHHHHHhcCCCCCeEEEEeCCCCcH-------HHHHHHHHHc---CCCCEEEccccHHHHHhC
Q 022409 166 NKQFLSKVEEKLPKDTDLIVACQKGLRS-------LAACELLYNA---GYRNLFWVQGGLEAAEEE 221 (297)
Q Consensus 166 ~~~f~~~~~~~l~kd~~IVvyC~~G~RS-------~~aa~~L~~~---Gy~nV~~L~GG~~aw~~~ 221 (297)
.++..+.+. .++++++|||||.+|.|+ ..+++.|+.+ ||+ |+.|+||+.+|...
T Consensus 79 ~~~~~~~~~-~~~~~~~iVvyc~~g~~~~~~~~aa~~~~~~l~~l~~~G~~-v~~L~GG~~~W~~~ 142 (154)
T 1hzm_A 79 RGEDRDRFT-RRCGTDTVVLYDESSSDWNENTGGESLLGLLLKKLKDEGCR-AFYLEGGFSKFQAE 142 (154)
T ss_dssp TSHHHHHHH-HSTTSSCEEECCCSSSSSCSCSSCCSHHHHHHHHHHHTTCC-CEECCCCHHHHHHH
T ss_pred CHHHHHHHh-ccCCCCeEEEEeCCCCccccccccchHHHHHHHHHHHCCCc-eEEEcChHHHHHHH
Confidence 112223332 466788999999988875 4446677765 998 99999999999875
No 49
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.73 E-value=1.2e-17 Score=161.94 Aligned_cols=120 Identities=13% Similarity=0.133 Sum_probs=91.4
Q ss_pred ccCHHHHHHHhcCCCcEEEEeCChhhh-----------cccccCCeEecCCCCCcccccCCCCCccccccccCCccCCCC
Q 022409 93 VLTPREAGYAVQLSSKTLLDVRPSTER-----------KKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVP 161 (297)
Q Consensus 93 ~Is~eel~~~l~~~~~vlIDVRs~~Ef-----------~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~ 161 (297)
.|+++++.++++.++.+|||||++.|| ..||||||+|+|+....-... .+ ..-.
T Consensus 273 ~i~~~e~~~~l~~~~~~liDvR~~~e~~G~~~~~~~~~~~GhIpgAi~ip~~~~~~~~~--~~-------------~~~~ 337 (423)
T 2wlr_A 273 MLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGARWGHAGSDSTHME--DF-------------HNPD 337 (423)
T ss_dssp EECHHHHHTTTTCSSEEEEECSCHHHHHTSCCSSTTCCCCSEETTCEECCCCSSTTCCG--GG-------------BCTT
T ss_pred eecHHHHHHHhcCCCceEEecCchhheeeeccCCCCCCcCCCCCCccccccccccccHH--HH-------------cCCC
Confidence 389999998887778899999999999 899999999999862211100 00 0000
Q ss_pred CccccH-HHHHHHH-hcCCCCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHHHHHh-CCCCccC
Q 022409 162 TLSYNK-QFLSKVE-EKLPKDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLEAAEE-EDLVREG 227 (297)
Q Consensus 162 ~~~~~~-~f~~~~~-~~l~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~-~~lp~~~ 227 (297)
...+.+ ++.+.+. ..++++++||+||++|.||..++..|+.+||+||++|+||+.+|.. .++|++.
T Consensus 338 ~~~~~~~~l~~~~~~~~~~~~~~ivvyC~sG~rs~~aa~~L~~~G~~~v~~~~GG~~~W~~~~~~Pv~~ 406 (423)
T 2wlr_A 338 GTMRSADDITAMWKAWNIKPEQQVSFYCGTGWRASETFMYARAMGWKNVSVYDGGWYEWSSDPKNPVAT 406 (423)
T ss_dssp SSBCCHHHHHHHHHTTTCCTTSEEEEECSSSHHHHHHHHHHHHTTCSSEEEESSHHHHHTTSTTSCEEC
T ss_pred CcCCCHHHHHHHHHHcCCCCCCcEEEECCcHHHHHHHHHHHHHcCCCCcceeCccHHHHhcCCCCCccc
Confidence 011233 3334443 2478899999999999999999999999999999999999999998 7888863
No 50
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.73 E-value=2.8e-18 Score=171.36 Aligned_cols=104 Identities=19% Similarity=0.163 Sum_probs=89.1
Q ss_pred CCcccCHHHHHHHhcC-CCcEEEEeCChhhhcccccCCeEecCCCCCcccccCCCCCccccccccCCccCCCCCccccHH
Q 022409 90 KVKVLTPREAGYAVQL-SSKTLLDVRPSTERKKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTLSYNKQ 168 (297)
Q Consensus 90 ~~~~Is~eel~~~l~~-~~~vlIDVRs~~Ef~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~~~~~~~ 168 (297)
+++.|+++++.++++. ++.+|||||++.||..||||||+|||+..+...
T Consensus 5 ~~~~is~~~l~~~l~~~~~~~liDvR~~~e~~~ghIpgAv~ip~~~~~~~------------------------------ 54 (539)
T 1yt8_A 5 QIAVRTFHDIRAALLARRELALLDVREEDPFAQAHPLFAANLPLSRLELE------------------------------ 54 (539)
T ss_dssp -CEEECHHHHHHHHHHTCCBEEEECSCHHHHTTSBCTTCEECCGGGHHHH------------------------------
T ss_pred cCcccCHHHHHHHHhCCCCeEEEECCCHHHHhcCcCCCCEECCHHHHHHH------------------------------
Confidence 4788999999998864 478999999999999999999999997543321
Q ss_pred HHHHHHhc-CCCCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHHHHHhCCCCccC
Q 022409 169 FLSKVEEK-LPKDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLEAAEEEDLVREG 227 (297)
Q Consensus 169 f~~~~~~~-l~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~~~lp~~~ 227 (297)
+... .+++++|||||++|.||..+++.|+.+||+||++|+||+.+|.+.++|++.
T Consensus 55 ----~~~l~~~~~~~iVvyc~~g~~s~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~ 110 (539)
T 1yt8_A 55 ----IHARVPRRDTPITVYDDGEGLAPVAAQRLHDLGYSDVALLDGGLSGWRNAGGELFR 110 (539)
T ss_dssp ----HHHHSCCTTSCEEEECSSSSHHHHHHHHHHHTTCSSEEEETTHHHHHHHTTCCCBC
T ss_pred ----HHhhCCCCCCeEEEEECCCChHHHHHHHHHHcCCCceEEeCCCHHHHHhcCCCccc
Confidence 2222 247899999999999999999999999999999999999999999999864
No 51
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.73 E-value=2.9e-18 Score=170.09 Aligned_cols=97 Identities=28% Similarity=0.422 Sum_probs=85.9
Q ss_pred CCCCcccCHHHHHHHhcCCCcEEEEeCChhhhcccccCCeEecCCCCCcccccCCCCCccccccccCCccCCCCCccccH
Q 022409 88 DGKVKVLTPREAGYAVQLSSKTLLDVRPSTERKKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTLSYNK 167 (297)
Q Consensus 88 ~~~~~~Is~eel~~~l~~~~~vlIDVRs~~Ef~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~~~~~~ 167 (297)
.++++.|+++|+.++ .++.+|||||++.||+.+|||||+|||+..+.++..
T Consensus 469 ~~~~~~i~~~~~~~~--~~~~~~iDvR~~~e~~~~~i~ga~~ip~~~l~~~~~--------------------------- 519 (565)
T 3ntd_A 469 KGDATPIHFDQIDNL--SEDQLLLDVRNPGELQNGGLEGAVNIPVDELRDRMH--------------------------- 519 (565)
T ss_dssp HTSCCEECTTTTTSC--CTTEEEEECSCGGGGGGCCCTTCEECCGGGTTTSGG---------------------------
T ss_pred ccccceeeHHHHHhC--CCCcEEEEeCCHHHHhcCCCCCcEECCHHHHHHHHh---------------------------
Confidence 367888999998766 467899999999999999999999999877665432
Q ss_pred HHHHHHHhcCCCCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHHHHHhCC
Q 022409 168 QFLSKVEEKLPKDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLEAAEEED 222 (297)
Q Consensus 168 ~f~~~~~~~l~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~~~ 222 (297)
.++++++||+||++|.||..+++.|++.|| ||+.|+||+.+|.+.+
T Consensus 520 --------~~~~~~~iv~~c~~g~rs~~a~~~l~~~G~-~v~~l~gG~~~w~~~g 565 (565)
T 3ntd_A 520 --------ELPKDKEIIIFSQVGLRGNVAYRQLVNNGY-RARNLIGGYRTYKFAS 565 (565)
T ss_dssp --------GSCTTSEEEEECSSSHHHHHHHHHHHHTTC-CEEEETTHHHHHHHTC
T ss_pred --------hcCCcCeEEEEeCCchHHHHHHHHHHHcCC-CEEEEcChHHHHHhCc
Confidence 568899999999999999999999999999 8999999999998764
No 52
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.73 E-value=1.1e-17 Score=160.39 Aligned_cols=118 Identities=16% Similarity=0.166 Sum_probs=92.4
Q ss_pred CcccCHHHHHHHhcCCCcEEEEeCC--------hhhhcccccCCeEecCCCC-CcccccCCCCCccccccccCCccCCCC
Q 022409 91 VKVLTPREAGYAVQLSSKTLLDVRP--------STERKKAWIKGSIWIPIFD-IDDTFDAGSLPQKVTNFVMGGWWSGVP 161 (297)
Q Consensus 91 ~~~Is~eel~~~l~~~~~vlIDVRs--------~~Ef~~ghIpGAinIPl~~-~~e~~~~gtl~k~~~~~~~~~~w~G~~ 161 (297)
...|+++++.++++. .+|||||+ +.||..||||||+|+|+.. +.+... -.+..
T Consensus 13 ~~~Is~~el~~~l~~--~~iIDvR~~~~~~~~~~~ey~~gHIpGAi~ip~~~~l~~~~~----------------~~~~~ 74 (373)
T 1okg_A 13 KVFLDPSEVADHLAE--YRIVDCRYSLKIKDHGSIQYAKEHVKSAIRADVDTNLSKLVP----------------TSTAR 74 (373)
T ss_dssp CCEECHHHHTTCGGG--SEEEECCCCSSSTTTTTTHHHHCEETTCEECCTTTTSCCCCT----------------TCCCS
T ss_pred CcEEcHHHHHHHcCC--cEEEEecCCccccccchhHHhhCcCCCCEEeCchhhhhcccc----------------cCCcc
Confidence 578999999987754 89999998 6999999999999999875 543210 00112
Q ss_pred Cccc-cHHHHHHHHh-cCCCCCeEEEEe-CCCCcHH-HHHHHHHHcCCCCEEEccccHHHHHhCCCCccC
Q 022409 162 TLSY-NKQFLSKVEE-KLPKDTDLIVAC-QKGLRSL-AACELLYNAGYRNLFWVQGGLEAAEEEDLVREG 227 (297)
Q Consensus 162 ~~~~-~~~f~~~~~~-~l~kd~~IVvyC-~~G~RS~-~aa~~L~~~Gy~nV~~L~GG~~aw~~~~lp~~~ 227 (297)
.+.+ ..+|.+.+.. .++++++||||| ++|.||. .+++.|+.+|| ||++|+||+.+|.+.++|++.
T Consensus 75 ~~lp~~~~f~~~l~~~gi~~d~~VVvYc~~~G~rsa~ra~~~L~~~G~-~V~~L~GG~~aW~~~g~pv~~ 143 (373)
T 1okg_A 75 HPLPPXAEFIDWCMANGMAGELPVLCYDDECGAMGGCRLWWMLNSLGA-DAYVINGGFQACKAAGLEMES 143 (373)
T ss_dssp SCCCCHHHHHHHHHHTTCSSSSCEEEECSSTTTTTHHHHHHHHHHHTC-CEEEETTTTHHHHTTTCCEEC
T ss_pred ccCCCHHHHHHHHHHcCCCCCCeEEEEeCCCCchHHHHHHHHHHHcCC-eEEEeCCCHHHHHhhcCCccc
Confidence 2222 3455555542 367899999999 7898987 99999999999 999999999999999998854
No 53
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.73 E-value=3.5e-18 Score=170.64 Aligned_cols=104 Identities=18% Similarity=0.290 Sum_probs=91.6
Q ss_pred CCCcccCHHHHHHHhcCCCcEEEEeCChhhhcccccCCeEecCCCCCcccccCCCCCccccccccCCccCCCCCccccHH
Q 022409 89 GKVKVLTPREAGYAVQLSSKTLLDVRPSTERKKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTLSYNKQ 168 (297)
Q Consensus 89 ~~~~~Is~eel~~~l~~~~~vlIDVRs~~Ef~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~~~~~~~ 168 (297)
.....|+++++.++++.++.+|||||++.||..||||||+|+|...+.+.
T Consensus 374 ~~~~~i~~~~l~~~l~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~------------------------------ 423 (539)
T 1yt8_A 374 PRADTIDPTTLADWLGEPGTRVLDFTASANYAKRHIPGAAWVLRSQLKQA------------------------------ 423 (539)
T ss_dssp CCCCEECHHHHHHHTTSTTEEEEECSCHHHHHHCBCTTCEECCGGGHHHH------------------------------
T ss_pred CcCCccCHHHHHHHhcCCCeEEEEeCCHHHhhcCcCCCchhCCHHHHHHH------------------------------
Confidence 45688999999999887789999999999999999999999996433221
Q ss_pred HHHHHHhcCCCCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHHHHHhCCCCccC
Q 022409 169 FLSKVEEKLPKDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLEAAEEEDLVREG 227 (297)
Q Consensus 169 f~~~~~~~l~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~~~lp~~~ 227 (297)
+. .++++++||+||.+|.||..++..|+.+||++|++|+||+.+|.+.++|++.
T Consensus 424 ----l~-~l~~~~~ivv~C~sG~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~pv~~ 477 (539)
T 1yt8_A 424 ----LE-RLGTAERYVLTCGSSLLARFAVAEVQALSGKPVFLLDGGTSAWVAAGLPTED 477 (539)
T ss_dssp ----HH-HHCCCSEEEEECSSSHHHHHHHHHHHHHHCSCEEEETTHHHHHHHTTCCCBC
T ss_pred ----HH-hCCCCCeEEEEeCCChHHHHHHHHHHHcCCCCEEEeCCcHHHHHhCCCCccc
Confidence 22 3578899999999999999999999999999999999999999999999864
No 54
>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4
Probab=99.71 E-value=1e-17 Score=141.64 Aligned_cols=119 Identities=15% Similarity=0.019 Sum_probs=79.3
Q ss_pred CCCcccCHHHHHHHhcCC--CcEEEEeCChhhhcccccCCeEecCCCCCcccccCCCCCccccccccCCccCCCCCcccc
Q 022409 89 GKVKVLTPREAGYAVQLS--SKTLLDVRPSTERKKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTLSYN 166 (297)
Q Consensus 89 ~~~~~Is~eel~~~l~~~--~~vlIDVRs~~Ef~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~~~~~ 166 (297)
...+.|+++|+.++++.+ +.+|||||++.||+.||||||+|||+..+........+. ...
T Consensus 12 ~~~~~i~~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~gainip~~~~~~~~~~~~l~------------------~~l 73 (157)
T 1whb_A 12 KEKGAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHSLSVPEEAISPGVTASWIE------------------AHL 73 (157)
T ss_dssp CCCSEECHHHHHHHHTCSSSCEEEEEESCHHHHHHCCBTTCEEECSSSCCTTCCHHHHH------------------HSC
T ss_pred ccCCccCHHHHHHHHhcCCCCeEEEECCCHHHHHhccccCCcccCHHHccCCCcHHHHH------------------HHC
Confidence 457889999999988766 789999999999999999999999987654321000000 011
Q ss_pred HHHHHHHHhcCCCCCeEEEEeCCCCc----HHHHHHHHHHc--------CCCC-EEEccccHHHHHhCCCCcc
Q 022409 167 KQFLSKVEEKLPKDTDLIVACQKGLR----SLAACELLYNA--------GYRN-LFWVQGGLEAAEEEDLVRE 226 (297)
Q Consensus 167 ~~f~~~~~~~l~kd~~IVvyC~~G~R----S~~aa~~L~~~--------Gy~n-V~~L~GG~~aw~~~~lp~~ 226 (297)
++..+.+.....+...||+||++|.+ +..+++.|.+. ||.+ |+.|+|||.+|.+. +|..
T Consensus 74 p~~~~~~~~~~~~~~~VVvy~~~~~~~~~~a~~~~~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~~ 145 (157)
T 1whb_A 74 PDDSKDTWKKRGNVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQY 145 (157)
T ss_dssp CTTHHHHHHGGGTSSEEEEECSSCCGGGCCTTCHHHHHHHTTTTTCSSCCCSSCCEEESSCHHHHHHH-CGGG
T ss_pred ChHHHHHHHhcCCCCEEEEECCCCCccccccccHHHHHHHHHHHhccccccCCCeEEEcchHHHHHHH-Chhh
Confidence 11111221122233469999987653 34556666532 4543 99999999999985 7764
No 55
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.71 E-value=6.1e-18 Score=169.24 Aligned_cols=99 Identities=35% Similarity=0.573 Sum_probs=88.1
Q ss_pred hhCCCCcccCHHHHHHHhcCCCcEEEEeCChhhhcccccCCeEecCCCCCcccccCCCCCccccccccCCccCCCCCccc
Q 022409 86 IRDGKVKVLTPREAGYAVQLSSKTLLDVRPSTERKKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTLSY 165 (297)
Q Consensus 86 ~~~~~~~~Is~eel~~~l~~~~~vlIDVRs~~Ef~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~~~~ 165 (297)
.....++.|+++|+.++++ ++.+|||||++.||+.||||||+|||+..+.++.
T Consensus 483 ~~~~~~~~i~~~~~~~~~~-~~~~~iDvR~~~e~~~ghi~ga~~ip~~~l~~~~-------------------------- 535 (588)
T 3ics_A 483 IVDGFVDTVQWHEIDRIVE-NGGYLIDVREPNELKQGMIKGSINIPLDELRDRL-------------------------- 535 (588)
T ss_dssp HHTTSCCEECTTTHHHHHH-TTCEEEECSCGGGGGGCBCTTEEECCHHHHTTCG--------------------------
T ss_pred ccccccceecHHHHHHHhc-CCCEEEEcCCHHHHhcCCCCCCEECCHHHHHHHH--------------------------
Confidence 4457889999999999885 4689999999999999999999999987665443
Q ss_pred cHHHHHHHHhcCCCCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHHHHHhC
Q 022409 166 NKQFLSKVEEKLPKDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLEAAEEE 221 (297)
Q Consensus 166 ~~~f~~~~~~~l~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~~ 221 (297)
..++++++||+||++|.||..+++.|+++||+ |+.|+||+.+|.+.
T Consensus 536 ---------~~l~~~~~iv~~C~~g~rs~~a~~~l~~~G~~-v~~l~GG~~~w~~~ 581 (588)
T 3ics_A 536 ---------EEVPVDKDIYITCQLGMRGYVAARMLMEKGYK-VKNVDGGFKLYGTV 581 (588)
T ss_dssp ---------GGSCSSSCEEEECSSSHHHHHHHHHHHHTTCC-EEEETTHHHHHHHH
T ss_pred ---------hhCCCCCeEEEECCCCcHHHHHHHHHHHcCCc-EEEEcchHHHHHhh
Confidence 25678999999999999999999999999998 99999999999875
No 56
>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4
Probab=99.71 E-value=1.1e-17 Score=141.78 Aligned_cols=119 Identities=14% Similarity=-0.012 Sum_probs=78.4
Q ss_pred CCCcccCHHHHHHHhcCC--CcEEEEeCChhhhcccccCCeEecCCCCCcccccCCCCCccccccccCCccCCCCCcccc
Q 022409 89 GKVKVLTPREAGYAVQLS--SKTLLDVRPSTERKKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTLSYN 166 (297)
Q Consensus 89 ~~~~~Is~eel~~~l~~~--~~vlIDVRs~~Ef~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~~~~~ 166 (297)
...+.|+++|+.++++.+ +.+|||||++.||+.||||||+|||+..+........+ ....
T Consensus 17 ~~~~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~gAinip~~~l~~~~~~~~l------------------~~~l 78 (157)
T 2gwf_A 17 RGSGAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHSLSVPEEAISPGVTASWI------------------EAHL 78 (157)
T ss_dssp --CCEECHHHHHHHHHSTTSCEEEEECSCHHHHHHSCBTTCEECCGGGCCTTCCHHHH------------------HHTS
T ss_pred CCCCccCHHHHHHHHhcCCCCeEEEECCCHHHHHhcCccCCcccCHHHcCCCCcHHHH------------------HHHc
Confidence 457789999999988765 78999999999999999999999998655432100000 0011
Q ss_pred HHHHHHHHhcCCCCCeEEEEeCCCCc----HHHHHHHHH----Hc----CCCC-EEEccccHHHHHhCCCCcc
Q 022409 167 KQFLSKVEEKLPKDTDLIVACQKGLR----SLAACELLY----NA----GYRN-LFWVQGGLEAAEEEDLVRE 226 (297)
Q Consensus 167 ~~f~~~~~~~l~kd~~IVvyC~~G~R----S~~aa~~L~----~~----Gy~n-V~~L~GG~~aw~~~~lp~~ 226 (297)
|+..+.+.....+...||+||++|.+ +..+++.|. +. ||.+ |+.|+|||.+|.+. +|..
T Consensus 79 p~~~~~l~~~~~~~~~VVvy~~~~~~~~~~a~~~l~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~~ 150 (157)
T 2gwf_A 79 PDDSKDTWKKRGNVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQY 150 (157)
T ss_dssp CHHHHHHHHTTTTSSEEEEECSSCCGGGCCTTCHHHHHHHHHHTSCCSSCCSSCCEEETTHHHHHHHH-CGGG
T ss_pred CHHHHHHHHhcCCCCEEEEEcCCCCccccCcccHHHHHHHHHHhhccccccCCceEEEccHHHHHHHH-Chhh
Confidence 22222222233334469999987653 344555555 22 4543 99999999999985 6663
No 57
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.69 E-value=3.7e-17 Score=158.44 Aligned_cols=116 Identities=13% Similarity=0.156 Sum_probs=92.7
Q ss_pred cccCHHHHHHHhcC--------CCcEEEEeC--ChhhhcccccCCeEecCCCCCcccccCCCCCccccccccCCccCCCC
Q 022409 92 KVLTPREAGYAVQL--------SSKTLLDVR--PSTERKKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVP 161 (297)
Q Consensus 92 ~~Is~eel~~~l~~--------~~~vlIDVR--s~~Ef~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~ 161 (297)
..++++++.++++. ++.+||||| ++.||..||||||+|+|+..+....+ +
T Consensus 124 ~~i~~~~l~~~~~~~~~~~~~~~~~~liDvR~~~~~e~~~ghIpgA~nip~~~~~~~~~-~------------------- 183 (423)
T 2wlr_A 124 QLVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWGAPKLYLISHIPGADYIDTNEVESEPL-W------------------- 183 (423)
T ss_dssp GEECHHHHHHHHTTCCCTTCCSSCEEEEEEESSSCSHHHHCBCTTCEEEEGGGTEETTT-T-------------------
T ss_pred cccCHHHHHHHhhccccccccCCCeEEEEecCCCchhhccCcCCCcEEcCHHHhccCCC-C-------------------
Confidence 46889999888762 468999999 99999999999999999876532100 0
Q ss_pred CccccHHHHHHHHh-cCCCCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHHHHHhCCCCccC
Q 022409 162 TLSYNKQFLSKVEE-KLPKDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLEAAEEEDLVREG 227 (297)
Q Consensus 162 ~~~~~~~f~~~~~~-~l~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~~~lp~~~ 227 (297)
.+....+|.+.+.+ .++++++||+||++|.||..++..|+.+||+||+.|+||+.+|...++|++.
T Consensus 184 ~~~~~~~l~~~~~~~gi~~~~~ivvyC~~G~~a~~~~~~L~~~G~~~v~~l~Gg~~~W~~~g~pv~~ 250 (423)
T 2wlr_A 184 NKVSDEQLKAMLAKHGIRHDTTVILYGRDVYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVER 250 (423)
T ss_dssp EECCHHHHHHHHHHTTCCTTSEEEEECSSHHHHHHHHHHHHHHTCSCEEEETTTHHHHHHTTCCCBC
T ss_pred CCCCHHHHHHHHHHcCCCCCCeEEEECCCchHHHHHHHHHHHcCCCCeEEECCCHHHHhhCCCCccc
Confidence 01122344444442 3678999999999999999999999999999999999999999999999864
No 58
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.65 E-value=1e-16 Score=153.59 Aligned_cols=101 Identities=11% Similarity=0.093 Sum_probs=77.5
Q ss_pred CCCcEEEEeCChhhhc-----------ccccCCeEecCCCCCc--ccccCCCCCccccccccCCccCCCCCccccHHHHH
Q 022409 105 LSSKTLLDVRPSTERK-----------KAWIKGSIWIPIFDID--DTFDAGSLPQKVTNFVMGGWWSGVPTLSYNKQFLS 171 (297)
Q Consensus 105 ~~~~vlIDVRs~~Ef~-----------~ghIpGAinIPl~~~~--e~~~~gtl~k~~~~~~~~~~w~G~~~~~~~~~f~~ 171 (297)
.++.+|||||++.||. .||||||+|||+..+. +.. ++. .+.++.++
T Consensus 172 ~~~~~lIDvR~~~Ef~G~~~~~~~~~~~GhIpGAiniP~~~l~~~~~~--~~~-------------------~~~~~~l~ 230 (373)
T 1okg_A 172 PPQAIITDARSADRFASTVRPYAADKMPGHIEGARNLPYTSHLVTRGD--GKV-------------------LRSEEEIR 230 (373)
T ss_dssp CTTCCEEECSCHHHHTCCSSCCTTCSSSSCSTTCEECCGGGGEECCSS--SCE-------------------ECCHHHHH
T ss_pred ccCceEEeCCCHHHccccccccccCCcCccCCCcEEecHHHhhccCCC--CCc-------------------cCCHHHHH
Confidence 3467899999999999 9999999999987754 210 110 12333344
Q ss_pred HHHhc----CCC---CCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHHHHHh-CCCCcc
Q 022409 172 KVEEK----LPK---DTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLEAAEE-EDLVRE 226 (297)
Q Consensus 172 ~~~~~----l~k---d~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~-~~lp~~ 226 (297)
+.... +++ +++||+||++|.||..++..|+.+||+||++|+|||.+|.. .++|++
T Consensus 231 ~~~~~~~~gi~~~~~d~~ivvyC~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~pv~ 293 (373)
T 1okg_A 231 HNIMTVVQGAGDAADLSSFVFSCGSGVTACINIALVHHLGLGHPYLYCGSWSEYSGLFRPPIM 293 (373)
T ss_dssp HHHHTTCC-----CCCTTSEEECSSSSTHHHHHHHHHHTTSCCCEECSSHHHHHHHHTHHHHH
T ss_pred HHHHhhhcCCCcccCCCCEEEECCchHHHHHHHHHHHHcCCCCeeEeCChHHHHhcCCCCCcc
Confidence 33333 367 89999999999999999999999999999999999999987 577764
No 59
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.63 E-value=1.8e-17 Score=162.83 Aligned_cols=87 Identities=24% Similarity=0.360 Sum_probs=0.0
Q ss_pred HHHHhcCCCcEEEEeCChhhhcccccCCeEecCCCCCcccccCCCCCccccccccCCccCCCCCccccHHHHHHHHhcCC
Q 022409 99 AGYAVQLSSKTLLDVRPSTERKKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTLSYNKQFLSKVEEKLP 178 (297)
Q Consensus 99 l~~~l~~~~~vlIDVRs~~Ef~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~~~~~~~f~~~~~~~l~ 178 (297)
+.++++.++.+|||||++.||+.||||||+|+|+..+.++. ..++
T Consensus 379 ~~~~~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~l~~~~-----------------------------------~~l~ 423 (466)
T 3r2u_A 379 HSEDITGNESHILDVRNDNEWNNGHLSQAVHVPHGKLLETD-----------------------------------LPFN 423 (466)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHhCCCcEEEEeCCHHHHhcCcCCCCEECCHHHHHHHH-----------------------------------hhCC
Confidence 33444556789999999999999999999999987765443 1467
Q ss_pred CCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHHHHHh
Q 022409 179 KDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLEAAEE 220 (297)
Q Consensus 179 kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~ 220 (297)
++++||+||++|.||..++..|+++||+||+.|+||+.+|.+
T Consensus 424 ~~~~iv~~C~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~ 465 (466)
T 3r2u_A 424 KNDVIYVHCQSGIRSSIAIGILEHKGYHNIINVNEGYKDIQL 465 (466)
T ss_dssp ------------------------------------------
T ss_pred CCCeEEEECCCChHHHHHHHHHHHcCCCCEEEecChHHHHhh
Confidence 889999999999999999999999999999999999999975
No 60
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.63 E-value=3.5e-16 Score=139.32 Aligned_cols=96 Identities=15% Similarity=0.083 Sum_probs=72.4
Q ss_pred CCCcEEEEeCChhhhcccccCCeEecCCC--CCcccccCCCCCccccccccCCccCCCCCccccHHHHHHHHhcCCCCCe
Q 022409 105 LSSKTLLDVRPSTERKKAWIKGSIWIPIF--DIDDTFDAGSLPQKVTNFVMGGWWSGVPTLSYNKQFLSKVEEKLPKDTD 182 (297)
Q Consensus 105 ~~~~vlIDVRs~~Ef~~ghIpGAinIPl~--~~~e~~~~gtl~k~~~~~~~~~~w~G~~~~~~~~~f~~~~~~~l~kd~~ 182 (297)
.++.+|||||++.||..||||||+|+|+. .+.+.. ...+...++.+.+....++.+++
T Consensus 4 ~~~~~iiDvR~~~ey~~ghIpgAi~ip~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~l~~~~~ 63 (230)
T 2eg4_A 4 PEDAVLVDTRPRPAYEAGHLPGARHLDLSAPKLRLRE--------------------EAELKALEGGLTELFQTLGLRSP 63 (230)
T ss_dssp CTTCEEEECSCHHHHHHCBCTTCEECCCCSCCCCCCS--------------------HHHHHHHHHHHHHHHHHTTCCSS
T ss_pred CCCEEEEECCChhhHhhCcCCCCEECCccchhcccCC--------------------CCCcCCCHHHHHHHHHhcCCCCE
Confidence 35789999999999999999999999987 432110 00111222333444345566889
Q ss_pred EEEEeCCCC-cHHHHHHHHHHcCCCCEEEccccHHHHHhCCCCcc
Q 022409 183 LIVACQKGL-RSLAACELLYNAGYRNLFWVQGGLEAAEEEDLVRE 226 (297)
Q Consensus 183 IVvyC~~G~-RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~~~lp~~ 226 (297)
|||||++|. +|..+++.|+ +||+||+.|+|| |.+ +|++
T Consensus 64 ivvyc~~g~~~s~~a~~~L~-~G~~~v~~l~GG---W~~--~p~~ 102 (230)
T 2eg4_A 64 VVLYDEGLTSRLCRTAFFLG-LGGLEVQLWTEG---WEP--YATE 102 (230)
T ss_dssp EEEECSSSCHHHHHHHHHHH-HTTCCEEEECSS---CGG--GCCB
T ss_pred EEEEcCCCCccHHHHHHHHH-cCCceEEEeCCC---Ccc--Cccc
Confidence 999999888 9999999999 999999999999 876 6663
No 61
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.54 E-value=1.5e-14 Score=136.67 Aligned_cols=116 Identities=16% Similarity=0.062 Sum_probs=83.8
Q ss_pred ccCHHHHHHHhcCC----CcEEEEeCChhhhc-----------ccccCCeEecCCCCCcccccCCCCCccccccccCCcc
Q 022409 93 VLTPREAGYAVQLS----SKTLLDVRPSTERK-----------KAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWW 157 (297)
Q Consensus 93 ~Is~eel~~~l~~~----~~vlIDVRs~~Ef~-----------~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w 157 (297)
.++.+++.+.++.+ +.+|||+|++.||. .||||||+|+|+.++-+.. +..++..
T Consensus 185 v~~~~~v~~~v~~~~~~~~~~lvDaRs~~rf~G~~~ep~~~~r~GHIPGA~nlP~~~~ld~~--~~~~~~~--------- 253 (327)
T 3utn_X 185 IVDYEEMFQLVKSGELAKKFNAFDARSLGRFEGTEPEPRSDIPSGHIPGTQPLPYGSLLDPE--TKTYPEA--------- 253 (327)
T ss_dssp EECHHHHHHHHHTTCHHHHCEEEECSCHHHHHTSSCCSSSSCCCCBCTTEEECCGGGGSCTT--TCCCCCT---------
T ss_pred eecHHHHhhhhhcccccccceeeccCccceecccccCccccccCCCCCCCcccChhhccCCC--CCCCCCc---------
Confidence 36778888777543 46899999999995 4999999999987654321 1111100
Q ss_pred CCCCCccccHHHHHHHH----hcCCCCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHHHHHhCCCC
Q 022409 158 SGVPTLSYNKQFLSKVE----EKLPKDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLEAAEEEDLV 224 (297)
Q Consensus 158 ~G~~~~~~~~~f~~~~~----~~l~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~~~lp 224 (297)
.......+++.. ..++++++||+||++|.|+...+..|+.+||+||.+|+|+|..|.....|
T Consensus 254 -----~e~l~~~l~~~~~~~~~gid~~k~vI~yCgsGvtA~~~~laL~~lG~~~v~lYdGSWsEW~~r~~p 319 (327)
T 3utn_X 254 -----GEAIHATLEKALKDFHCTLDPSKPTICSCGTGVSGVIIKTALELAGVPNVRLYDGSWTEWVLKSGP 319 (327)
T ss_dssp -----THHHHHHHHHHHHHTTCCCCTTSCEEEECSSSHHHHHHHHHHHHTTCCSEEEESSHHHHHHHHHCG
T ss_pred -----HHHHHHHHHHHHHHhhcCCCCCCCEEEECChHHHHHHHHHHHHHcCCCCceeCCCcHHHhccccCC
Confidence 001112222221 24678899999999999999999999999999999999999999875433
No 62
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.50 E-value=1.3e-14 Score=142.14 Aligned_cols=103 Identities=17% Similarity=0.152 Sum_probs=83.7
Q ss_pred CCCCcccCHHHHHHHhcCCCcEEEEeCChhhhcccccCCeEecCCCCCcccccCCCCCccccccccCCccCCCCCccccH
Q 022409 88 DGKVKVLTPREAGYAVQLSSKTLLDVRPSTERKKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTLSYNK 167 (297)
Q Consensus 88 ~~~~~~Is~eel~~~l~~~~~vlIDVRs~~Ef~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~~~~~~ 167 (297)
....+.|+++|+.++++. + +|||||++.||..||||||+|+|+..
T Consensus 269 ~~~~~~is~~~l~~~l~~-~-~iiD~R~~~~y~~ghIpGA~~i~~~~--------------------------------- 313 (474)
T 3tp9_A 269 APERVDLPPERVRAWREG-G-VVLDVRPADAFAKRHLAGSLNIPWNK--------------------------------- 313 (474)
T ss_dssp CCEECCCCGGGHHHHHHT-S-EEEECSCHHHHHHSEETTCEECCSST---------------------------------
T ss_pred cCCCceeCHHHHHHHhCC-C-EEEECCChHHHhccCCCCeEEECcch---------------------------------
Confidence 456788999999999876 4 99999999999999999999999642
Q ss_pred HHHHHHHhcCCCCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHHHHHhCCCCcc
Q 022409 168 QFLSKVEEKLPKDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLEAAEEEDLVRE 226 (297)
Q Consensus 168 ~f~~~~~~~l~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~~~lp~~ 226 (297)
.|.+.+....+++++|||||.+|. +..+++.|+.+||++|+.+.+|+.+|...+.++.
T Consensus 314 ~~~~~~~~l~~~~~~vvvy~~~~~-~~~~~~~L~~~G~~~v~~~l~G~~~W~~~g~~~~ 371 (474)
T 3tp9_A 314 SFVTWAGWLLPADRPIHLLAADAI-APDVIRALRSIGIDDVVDWTDPAAVDRAAPDDVA 371 (474)
T ss_dssp THHHHHHHHCCSSSCEEEECCTTT-HHHHHHHHHHTTCCCEEEEECGGGGTTCCGGGEE
T ss_pred HHHHHHHhcCCCCCeEEEEECCCc-HHHHHHHHHHcCCcceEEecCcHHHHHhcccccc
Confidence 122222223467889999999876 5669999999999999987779999998776654
No 63
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.50 E-value=1.2e-13 Score=130.34 Aligned_cols=119 Identities=19% Similarity=0.159 Sum_probs=91.2
Q ss_pred CCcccCHHHHHHHhcCC---CcEEEEeC--------C-hhhh-cccccCCeEecCCCCCcccccCCCCCccccccccCCc
Q 022409 90 KVKVLTPREAGYAVQLS---SKTLLDVR--------P-STER-KKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGW 156 (297)
Q Consensus 90 ~~~~Is~eel~~~l~~~---~~vlIDVR--------s-~~Ef-~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~ 156 (297)
..+.|||+|+.++++.+ .+++||++ + ..|| +++|||||+++++..+.+..
T Consensus 26 ~~~LIsp~~l~~ll~~~~~~rvv~lDasw~lP~~~r~~~~E~~~~~HIPGAv~~Dld~~~d~~----------------- 88 (327)
T 3utn_X 26 LFDLISPKAFVKLVASEKVHRIVPVDATWYLPSWKLDNKVDFLTKPRIPNSIFFDIDAISDKK----------------- 88 (327)
T ss_dssp SCEEECHHHHHHHHHHCSSSCEEEEECCCCCGGGCCCHHHHHHHSCBCTTCEECCTTTSSCTT-----------------
T ss_pred cccccCHHHHHHHHhCCCCCcEEEEEecCCCCCCCCCHHHHHHhhCcCCCCeeeChHHhcCCC-----------------
Confidence 45679999999998543 47899986 2 3477 78999999999986544321
Q ss_pred cCCCCCccccH-HHHHHHHhc-CCCCCeEEEEeCCC-CcHHHHHHHHHHcCCCCEEEccccHHHHHhCCCCccC
Q 022409 157 WSGVPTLSYNK-QFLSKVEEK-LPKDTDLIVACQKG-LRSLAACELLYNAGYRNLFWVQGGLEAAEEEDLVREG 227 (297)
Q Consensus 157 w~G~~~~~~~~-~f~~~~~~~-l~kd~~IVvyC~~G-~RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~~~lp~~~ 227 (297)
..++.|.+.+ .|.+.+.+. +.++++||||..+| .-+..+++.|+.+|++||++|+|| .+|.++++|++.
T Consensus 89 -~~~ph~LP~~~~f~~~l~~lGI~~d~~VVvYD~~~~~~AaR~wW~Lr~~Gh~~V~vLdGg-~aW~~~g~p~~~ 160 (327)
T 3utn_X 89 -SPYPHMFPTKKVFDDAMSNLGVQKDDILVVYDRVGNFSSPRCAWTLGVMGHPKVYLLNNF-NQYREFKYPLDS 160 (327)
T ss_dssp -SSSTTCCCCHHHHHHHHHHTTCCTTCEEEEECSSSSSSHHHHHHHHHHTTCSEEEEESCH-HHHHHTTCCCBC
T ss_pred -CCCCCCCcCHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHHcCCCceeecccH-HHHHHhCCCccc
Confidence 2345555555 454555433 78899999999854 578899999999999999999977 899999999864
No 64
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.11 E-value=6.4e-11 Score=116.10 Aligned_cols=80 Identities=18% Similarity=0.172 Sum_probs=60.5
Q ss_pred CCcEEEEeCChhhhcccccCCeEecCCCCCcccccCCCCCccccccccCCccCCCCCccccHHHHHHHHhcCCCCCeEEE
Q 022409 106 SSKTLLDVRPSTERKKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTLSYNKQFLSKVEEKLPKDTDLIV 185 (297)
Q Consensus 106 ~~~vlIDVRs~~Ef~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~~~~~~~f~~~~~~~l~kd~~IVv 185 (297)
++.+|||||++.||..||||||+|+|+... |...+...++++++||+
T Consensus 295 ~~~~ilD~R~~~~y~~gHIpGAv~ip~~~~---------------------------------~~~~~~~~~~~~~~vvl 341 (466)
T 3r2u_A 295 TNRLTFDLRSKEAYHGGHIEGTINIPYDKN---------------------------------FINQIGWYLNYDQEINL 341 (466)
T ss_dssp CCSEEEECSCHHHHHHSCCTTCEECCSSTT---------------------------------HHHHHTTTCCTTSCEEE
T ss_pred CCeEEEECCCHHHHhhCCCCCcEECCccHH---------------------------------HHHHHHhccCCCCeEEE
Confidence 578999999999999999999999996531 11111123578899999
Q ss_pred EeCCCCcHHHHHHHHHHcCCCCEEE-ccccHHHHH
Q 022409 186 ACQKGLRSLAACELLYNAGYRNLFW-VQGGLEAAE 219 (297)
Q Consensus 186 yC~~G~RS~~aa~~L~~~Gy~nV~~-L~GG~~aw~ 219 (297)
||. +.++..+++.|+.+||+||+. ++|+...|.
T Consensus 342 y~~-~~~a~~a~~~L~~~G~~~v~~~l~g~~~~~~ 375 (466)
T 3r2u_A 342 IGD-YHLVSKATHTLQLIGYDDIAGYQLPQSKIQT 375 (466)
T ss_dssp ESC-HHHHHHHHHHHHTTTCCCEEEEECCC-----
T ss_pred EEC-CchHHHHHHHhhhhhcccccccccCcccccH
Confidence 999 458999999999999999986 677654443
No 65
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}
Probab=97.95 E-value=9e-06 Score=67.86 Aligned_cols=84 Identities=20% Similarity=0.218 Sum_probs=48.8
Q ss_pred CHHHHHHHhcCCCcEEEEeCChhh------------hccc-ccCCeEecCCCCCcccccCCCCCccccccccCCccCCCC
Q 022409 95 TPREAGYAVQLSSKTLLDVRPSTE------------RKKA-WIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVP 161 (297)
Q Consensus 95 s~eel~~~l~~~~~vlIDVRs~~E------------f~~g-hIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~ 161 (297)
+++++..+.+.+-..|||+|++.| +..+ +|+|.+|+|+....-.
T Consensus 31 ~~~d~~~L~~~Gi~~IIdlR~~~E~~~~p~~~~~~~~~~~~gi~~~~~iPv~~~~~~----------------------- 87 (156)
T 2f46_A 31 TKADAEQIAQLGIKTIICNRPDREEESQPDFAQIKQWLEQAGVTGFHHQPVTARDIQ----------------------- 87 (156)
T ss_dssp CGGGHHHHHHHTCCEEEECSCTTSSTTCCCHHHHHHHHGGGTCCEEEECCCCTTTCC-----------------------
T ss_pred CHHHHHHHHHCCCCEEEECCCCccccCCCcHHHHHHHHHHCCCHhheECccCCCCCC-----------------------
Confidence 344444333334458999998877 2333 5999999998642100
Q ss_pred CccccHHHHHHHHhcCCCCCeEEEEeCCCCcHHHHHHHH-HHcCC
Q 022409 162 TLSYNKQFLSKVEEKLPKDTDLIVACQKGLRSLAACELL-YNAGY 205 (297)
Q Consensus 162 ~~~~~~~f~~~~~~~l~kd~~IVvyC~~G~RS~~aa~~L-~~~Gy 205 (297)
.....+|.+.+. ..++||+|||+.|.|+..++..+ ...|.
T Consensus 88 -~~~~~~~~~~l~---~~~~pVlvHC~sG~Rs~~l~al~l~~~g~ 128 (156)
T 2f46_A 88 -KHDVETFRQLIG---QAEYPVLAYCRTGTRCSLLWGFRRAAEGM 128 (156)
T ss_dssp -HHHHHHHHHHHH---TSCSSEEEECSSSHHHHHHHHHHHHHTTC
T ss_pred -HHHHHHHHHHHH---hCCCCEEEECCCCCCHHHHHHHHHHHcCC
Confidence 001123333332 24679999999999987554332 33454
No 66
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=95.48 E-value=0.037 Score=44.38 Aligned_cols=76 Identities=21% Similarity=0.301 Sum_probs=44.1
Q ss_pred cEEEEeCChhhhcccccCC--eEecCCCCCcccccCCCCCccccccccCCccCCCCCccccHHHHHHHHhcCCCCCeEEE
Q 022409 108 KTLLDVRPSTERKKAWIKG--SIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTLSYNKQFLSKVEEKLPKDTDLIV 185 (297)
Q Consensus 108 ~vlIDVRs~~Ef~~ghIpG--AinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~~~~~~~f~~~~~~~l~kd~~IVv 185 (297)
..+||+|++.|......+| -+++|+.+... +......++++.+.+...++.+|+|
T Consensus 37 ~~Vi~l~~~~~~~~~~~~~~~~~~~~~~d~~~-----------------------~~~~~~~~~~~~i~~~~~~~~~vlV 93 (150)
T 4erc_A 37 RHLVSLTERGPPHSDSCPGLTLHRLRIPDFCP-----------------------PAPDQIDRFVQIVDEANARGEAVGV 93 (150)
T ss_dssp EEEEECSSSCCTTGGGCTTSEEEECCCCTTSC-----------------------CCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEcCCCCCCcccccCCceEEEEecCCCCC-----------------------CCHHHHHHHHHHHHHHHHCCCCEEE
Confidence 4799999987765444444 34566543211 0111223444444433445689999
Q ss_pred EeCCCC-cHHH--HHHHHHHcCCC
Q 022409 186 ACQKGL-RSLA--ACELLYNAGYR 206 (297)
Q Consensus 186 yC~~G~-RS~~--aa~~L~~~Gy~ 206 (297)
+|..|. ||.. ++.++...|++
T Consensus 94 HC~~G~~Rsg~~~a~~l~~~~~~~ 117 (150)
T 4erc_A 94 HCALGFGRTGTMLACYLVKERGLA 117 (150)
T ss_dssp ECSSSSHHHHHHHHHHHHHHHTCC
T ss_pred ECCCCCCHHHHHHHHHHHHHcCCC
Confidence 999887 8873 33345557763
No 67
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=94.33 E-value=0.094 Score=41.85 Aligned_cols=76 Identities=18% Similarity=0.230 Sum_probs=41.7
Q ss_pred cEEEEeCChhhhcccccCC--eEecCCCCCcccccCCCCCccccccccCCccCCCCCccccHHHHHHHHhcCCCCCeEEE
Q 022409 108 KTLLDVRPSTERKKAWIKG--SIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTLSYNKQFLSKVEEKLPKDTDLIV 185 (297)
Q Consensus 108 ~vlIDVRs~~Ef~~ghIpG--AinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~~~~~~~f~~~~~~~l~kd~~IVv 185 (297)
..+||+|++.|+....+++ -.++|+.+... +......++++.+.+.+..+.+|+|
T Consensus 38 ~~Vv~l~~~~e~~~~~~~~~~~~~~~~~d~~~-----------------------p~~~~~~~~~~~i~~~~~~~~~vlV 94 (151)
T 2img_A 38 RHLVSLTERGPPHSDSCPGLTLHRLRIPDFCP-----------------------PAPDQIDRFVQIVDEANARGEAVGV 94 (151)
T ss_dssp EEEEECSSSCCTTGGGCTTSEEEECCCCTTCC-----------------------CCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEECCCCCCCCHHHHhhCCeEEEeCCCCCC-----------------------CCHHHHHHHHHHHHHHHhCCCcEEE
Confidence 4799999987765433332 45555433110 1111223444444443345789999
Q ss_pred EeCCCC-cHHHHH--HHHHHcCCC
Q 022409 186 ACQKGL-RSLAAC--ELLYNAGYR 206 (297)
Q Consensus 186 yC~~G~-RS~~aa--~~L~~~Gy~ 206 (297)
+|..|. ||..++ .++...|++
T Consensus 95 HC~aG~~Rsg~~~~~~l~~~~~~~ 118 (151)
T 2img_A 95 HCALGFGRTGTMLACYLVKERGLA 118 (151)
T ss_dssp ECSSSSSHHHHHHHHHHHHHHCCC
T ss_pred ECCCCCChHHHHHHHHHHHHhCcC
Confidence 999776 876543 334444763
No 68
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=94.06 E-value=0.1 Score=42.03 Aligned_cols=39 Identities=15% Similarity=0.134 Sum_probs=25.1
Q ss_pred HHHHHHHhcCCCCCeEEEEeCCCC-cHHHH--HHHHHHcCCC
Q 022409 168 QFLSKVEEKLPKDTDLIVACQKGL-RSLAA--CELLYNAGYR 206 (297)
Q Consensus 168 ~f~~~~~~~l~kd~~IVvyC~~G~-RS~~a--a~~L~~~Gy~ 206 (297)
++++.+......+.+|+|+|..|. ||..+ +.++...|++
T Consensus 77 ~~~~~i~~~~~~~~~vlVHC~~G~~Rsg~~~~a~l~~~~~~~ 118 (157)
T 3rgo_A 77 KGVQFALKYQALGQCVYVHCKAGRSRSATMVAAYLIQVHNWS 118 (157)
T ss_dssp HHHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHCCCEEEEECCCCCChHHHHHHHHHHHHcCCC
Confidence 333333333345679999999887 88765 4556667764
No 69
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=93.61 E-value=0.15 Score=40.99 Aligned_cols=28 Identities=18% Similarity=0.291 Sum_probs=21.2
Q ss_pred CCCeEEEEeCCC-CcHHH--HHHHHHHcCCC
Q 022409 179 KDTDLIVACQKG-LRSLA--ACELLYNAGYR 206 (297)
Q Consensus 179 kd~~IVvyC~~G-~RS~~--aa~~L~~~Gy~ 206 (297)
.+.+|+|+|..| .||.. +|.++...|++
T Consensus 80 ~~~~VlVHC~~G~~RS~~~v~ayLm~~~~~~ 110 (145)
T 2nt2_A 80 HGSKCLVHSKMGVSRSASTVIAYAMKEYGWN 110 (145)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHHHCCC
T ss_pred cCCeEEEECCCCCchHHHHHHHHHHHHhCCC
Confidence 567999999988 58864 46777777763
No 70
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=93.46 E-value=0.13 Score=42.30 Aligned_cols=29 Identities=28% Similarity=0.410 Sum_probs=21.7
Q ss_pred CCCCeEEEEeCCCC-cHHHH--HHHHHHcCCC
Q 022409 178 PKDTDLIVACQKGL-RSLAA--CELLYNAGYR 206 (297)
Q Consensus 178 ~kd~~IVvyC~~G~-RS~~a--a~~L~~~Gy~ 206 (297)
..+.+|+|+|..|. ||..+ |.+|...|++
T Consensus 87 ~~~~~VlVHC~aG~~RSg~~~~ayLm~~~~~~ 118 (164)
T 2hcm_A 87 RDGGSCLVYCKNGRSRSAAVCTAYLMRHRGHS 118 (164)
T ss_dssp HTTCEEEEEESSSSHHHHHHHHHHHHHHSCCC
T ss_pred HcCCEEEEECCCCCchHHHHHHHHHHHHhCCC
Confidence 35679999999885 87754 5677777763
No 71
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=92.42 E-value=0.28 Score=39.13 Aligned_cols=29 Identities=24% Similarity=0.304 Sum_probs=21.2
Q ss_pred CCCCeEEEEeCCCC-cHHH--HHHHHHHcCCC
Q 022409 178 PKDTDLIVACQKGL-RSLA--ACELLYNAGYR 206 (297)
Q Consensus 178 ~kd~~IVvyC~~G~-RS~~--aa~~L~~~Gy~ 206 (297)
.++.+|+|+|..|. ||.. ++.++...|++
T Consensus 79 ~~~~~VlVHC~~G~~RS~~~~~aylm~~~~~~ 110 (144)
T 3ezz_A 79 DCRGRVLVHSQAGISRSATICLAYLMMKKRVR 110 (144)
T ss_dssp HTTCCEEEEESSSSSHHHHHHHHHHHHHHTCC
T ss_pred hcCCeEEEECCCCCChhHHHHHHHHHHHcCCC
Confidence 35679999999886 8763 45666667774
No 72
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=92.32 E-value=0.36 Score=38.87 Aligned_cols=28 Identities=21% Similarity=0.338 Sum_probs=20.7
Q ss_pred CCCeEEEEeCCCC-cHHH--HHHHHHHcCCC
Q 022409 179 KDTDLIVACQKGL-RSLA--ACELLYNAGYR 206 (297)
Q Consensus 179 kd~~IVvyC~~G~-RS~~--aa~~L~~~Gy~ 206 (297)
.+.+|+|+|..|. ||.. ++.++...|++
T Consensus 89 ~~~~vlvHC~aG~~RS~~~~~ayl~~~~~~~ 119 (154)
T 2r0b_A 89 MGGKVLVHGNAGISRSAAFVIAYIMETFGMK 119 (154)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHHTCC
T ss_pred cCCCEEEEcCCCCChHHHHHHHHHHHHcCCC
Confidence 5679999999885 8875 35566667764
No 73
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}
Probab=91.99 E-value=0.29 Score=40.28 Aligned_cols=29 Identities=17% Similarity=0.407 Sum_probs=20.8
Q ss_pred CCCCeEEEEeCCCC-cHHH--HHHHHHHcCCC
Q 022409 178 PKDTDLIVACQKGL-RSLA--ACELLYNAGYR 206 (297)
Q Consensus 178 ~kd~~IVvyC~~G~-RS~~--aa~~L~~~Gy~ 206 (297)
..+.+|+|+|..|. ||.. +|.++...|++
T Consensus 81 ~~~~~VlVHC~aG~~RSg~~~~ayLm~~~~~~ 112 (165)
T 1wrm_A 81 LRGESCLVHCLAGVSRSVTLVIAYIMTVTDFG 112 (165)
T ss_dssp HTTCEEEEECSSSSSHHHHHHHHHHHHTSSCC
T ss_pred HCCCeEEEECCCCCChhHHHHHHHHHHHcCCC
Confidence 35679999999885 8876 45556556653
No 74
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=91.82 E-value=0.33 Score=39.57 Aligned_cols=28 Identities=18% Similarity=0.226 Sum_probs=20.9
Q ss_pred CCCeEEEEeCCC-CcHHH--HHHHHHHcCCC
Q 022409 179 KDTDLIVACQKG-LRSLA--ACELLYNAGYR 206 (297)
Q Consensus 179 kd~~IVvyC~~G-~RS~~--aa~~L~~~Gy~ 206 (297)
.+.+|+|+|..| .||.. +|.+|...|++
T Consensus 83 ~~~~VlVHC~aG~~RSg~~~~aylm~~~~~~ 113 (160)
T 1yz4_A 83 NGGNCLVHSFAGISRSTTIVTAYVMTVTGLG 113 (160)
T ss_dssp TTCCEEEEETTSSSHHHHHHHHHHHHHHCCC
T ss_pred cCCeEEEECCCCCchHHHHHHHHHHHHcCCC
Confidence 567999999988 48874 45666777774
No 75
>1v8c_A MOAD related protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, protein binding; 1.60A {Thermus thermophilus} SCOP: d.15.3.1 d.129.5.1
Probab=91.61 E-value=0.025 Score=48.11 Aligned_cols=28 Identities=21% Similarity=0.265 Sum_probs=24.3
Q ss_pred cEEEEeCChhhhcccccCCeEecCCCCCcccc
Q 022409 108 KTLLDVRPSTERKKAWIKGSIWIPIFDIDDTF 139 (297)
Q Consensus 108 ~vlIDVRs~~Ef~~ghIpGAinIPl~~~~e~~ 139 (297)
.++||||.+.||+ |||+|||...++-+.
T Consensus 122 ~~liDvRe~~E~~----pgA~~iprg~lE~~~ 149 (168)
T 1v8c_A 122 GAVVRFREVEPLK----VGSLSIPQLRVEVEG 149 (168)
T ss_dssp TEEEEEEEEEEEE----ETTEEEEEEEEEEEE
T ss_pred eEEEECCChhhcC----CCCEEcChhHHHHhH
Confidence 4899999999999 999999987766553
No 76
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=91.52 E-value=0.39 Score=38.42 Aligned_cols=29 Identities=24% Similarity=0.260 Sum_probs=21.5
Q ss_pred CCCCeEEEEeCCCC-cHHH--HHHHHHHcCCC
Q 022409 178 PKDTDLIVACQKGL-RSLA--ACELLYNAGYR 206 (297)
Q Consensus 178 ~kd~~IVvyC~~G~-RS~~--aa~~L~~~Gy~ 206 (297)
.++.+|+|+|..|. ||.. +|.++...|++
T Consensus 79 ~~~~~VlVHC~~G~sRS~~~v~ayLm~~~~~~ 110 (144)
T 3s4e_A 79 RKDGVVLVHSNAGVSRAAAIVIGFLMNSEQTS 110 (144)
T ss_dssp HTTCCEEEECSSSSSHHHHHHHHHHHHHHCCC
T ss_pred HcCCeEEEEcCCCCchHHHHHHHHHHHHcCCC
Confidence 35679999999887 8654 46667778874
No 77
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*
Probab=91.37 E-value=0.39 Score=39.89 Aligned_cols=27 Identities=22% Similarity=0.447 Sum_probs=20.5
Q ss_pred CCeEEEEeCCCC-cHHH--HHHHHHHcCCC
Q 022409 180 DTDLIVACQKGL-RSLA--ACELLYNAGYR 206 (297)
Q Consensus 180 d~~IVvyC~~G~-RS~~--aa~~L~~~Gy~ 206 (297)
+.+|+|+|..|. ||.. ++.++...|++
T Consensus 115 ~~~VlVHC~~G~~RSg~~v~ayLm~~~~~~ 144 (183)
T 3f81_A 115 NGRVLVHCREGYSRSPTLVIAYLMMRQKMD 144 (183)
T ss_dssp TCCEEEECSSSSSHHHHHHHHHHHHHHCCC
T ss_pred CCeEEEECCCCcchHHHHHHHHHHHHhCCC
Confidence 679999999886 8776 45556677874
No 78
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}
Probab=90.85 E-value=0.49 Score=39.93 Aligned_cols=29 Identities=24% Similarity=0.339 Sum_probs=21.7
Q ss_pred CCCCeEEEEeCCCC-cHHH--HHHHHHHcCCC
Q 022409 178 PKDTDLIVACQKGL-RSLA--ACELLYNAGYR 206 (297)
Q Consensus 178 ~kd~~IVvyC~~G~-RS~~--aa~~L~~~Gy~ 206 (297)
..+.+|+|+|..|. ||.. +|.++...|++
T Consensus 95 ~~~~~VLVHC~aG~sRS~~vv~ayLm~~~~~s 126 (188)
T 2esb_A 95 MKQGRTLLHCAAGVSRSAALCLAYLMKYHAMS 126 (188)
T ss_dssp HTTCCEEEECSSSSSHHHHHHHHHHHHHSCCC
T ss_pred HcCCEEEEECCCCCchHHHHHHHHHHHHcCCC
Confidence 35679999999884 8874 46677777764
No 79
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}
Probab=90.70 E-value=0.3 Score=39.26 Aligned_cols=28 Identities=21% Similarity=0.370 Sum_probs=20.9
Q ss_pred CCCeEEEEeCCCC-cHHH--HHHHHHHcCCC
Q 022409 179 KDTDLIVACQKGL-RSLA--ACELLYNAGYR 206 (297)
Q Consensus 179 kd~~IVvyC~~G~-RS~~--aa~~L~~~Gy~ 206 (297)
.+.+|+|+|..|. ||.. +|.+|...|++
T Consensus 84 ~~~~vlVHC~aG~~RSg~~~~ayl~~~~~~~ 114 (151)
T 2e0t_A 84 PGGKILVHCAVGVSRSATLVLAYLMLYHHLT 114 (151)
T ss_dssp TTCCEEEECSSSSHHHHHHHHHHHHHHSCCC
T ss_pred CCCcEEEECCCCCChHHHHHHHHHHHHcCCC
Confidence 5679999999885 8773 45566777764
No 80
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A*
Probab=90.51 E-value=0.5 Score=40.45 Aligned_cols=39 Identities=18% Similarity=0.195 Sum_probs=23.6
Q ss_pred HHHHHHHHhcCCCCCeEEEEeCCCC-cHHHHH-HHHHH--cCC
Q 022409 167 KQFLSKVEEKLPKDTDLIVACQKGL-RSLAAC-ELLYN--AGY 205 (297)
Q Consensus 167 ~~f~~~~~~~l~kd~~IVvyC~~G~-RS~~aa-~~L~~--~Gy 205 (297)
.++++.+...+..+.+|+|+|..|. |+..++ .+|.. .|+
T Consensus 120 ~~~~~~i~~~~~~~~~VlVHC~aG~gRTg~~~a~~L~~~~~g~ 162 (212)
T 1fpz_A 120 CEIMEELTTCLKNYRKTLIHSYGGLGRSCLVAACLLLYLSDTI 162 (212)
T ss_dssp HHHHHHHHHHHHTTCCEEEECSSSSSHHHHHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCHHHHHHHHHHHHhccCC
Confidence 3455555443445779999999886 876543 33433 365
No 81
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens}
Probab=90.28 E-value=0.53 Score=39.84 Aligned_cols=28 Identities=25% Similarity=0.321 Sum_probs=21.1
Q ss_pred CCCeEEEEeCCCC-cHHH--HHHHHHHcCCC
Q 022409 179 KDTDLIVACQKGL-RSLA--ACELLYNAGYR 206 (297)
Q Consensus 179 kd~~IVvyC~~G~-RS~~--aa~~L~~~Gy~ 206 (297)
.+.+|+|+|..|. ||.. +|.+|...|++
T Consensus 102 ~~~~VlVHC~aG~~RSgtvv~ayLm~~~~~s 132 (190)
T 2wgp_A 102 KHGATLVHCAAGVSRSATLCIAYLMKFHNVC 132 (190)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHHCCC
T ss_pred cCCCEEEECCCCCCHHHHHHHHHHHHHcCCC
Confidence 5679999999884 8874 46677777763
No 82
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}
Probab=89.61 E-value=0.68 Score=40.29 Aligned_cols=28 Identities=21% Similarity=0.375 Sum_probs=21.2
Q ss_pred CCCCeEEEEeCCCC-cHHH--HHHHHHHcCC
Q 022409 178 PKDTDLIVACQKGL-RSLA--ACELLYNAGY 205 (297)
Q Consensus 178 ~kd~~IVvyC~~G~-RS~~--aa~~L~~~Gy 205 (297)
..+.+|+|+|..|. ||.. +|++|+..|+
T Consensus 81 ~~~~~VLVHC~aG~sRSgtvv~AYLm~~~g~ 111 (211)
T 2g6z_A 81 EKGGKVLVHSEAGISRSPTICMAYLMKTKQF 111 (211)
T ss_dssp HTTCCEEEEESSSSSHHHHHHHHHHHHHHCC
T ss_pred hcCCeEEEECCCCCCcHHHHHHHHHHHHcCC
Confidence 35679999999885 8864 4677777776
No 83
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=88.35 E-value=0.9 Score=38.53 Aligned_cols=29 Identities=21% Similarity=0.313 Sum_probs=21.8
Q ss_pred CCCCeEEEEeCCCC-cHHH--HHHHHHHcCCC
Q 022409 178 PKDTDLIVACQKGL-RSLA--ACELLYNAGYR 206 (297)
Q Consensus 178 ~kd~~IVvyC~~G~-RS~~--aa~~L~~~Gy~ 206 (297)
.++.+|+|+|..|. ||.. +|.+|...|++
T Consensus 115 ~~g~~VLVHC~~G~sRS~tvv~ayLm~~~~~s 146 (182)
T 2j16_A 115 TKREKILIHAQCGLSRSATLIIAYIMKYHNLS 146 (182)
T ss_dssp HTTCCEEEEESSCCSHHHHHHHHHHHHHTTCC
T ss_pred hcCCeEEEECCCCCChHHHHHHHHHHHHcCCC
Confidence 45789999999875 8765 56677777764
No 84
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A
Probab=88.14 E-value=0.86 Score=36.46 Aligned_cols=27 Identities=19% Similarity=0.388 Sum_probs=19.2
Q ss_pred CCCeEEEEeCCCC-cHHHHHH-HHHHcCC
Q 022409 179 KDTDLIVACQKGL-RSLAACE-LLYNAGY 205 (297)
Q Consensus 179 kd~~IVvyC~~G~-RS~~aa~-~L~~~Gy 205 (297)
.+.+|+|+|..|. |+..++. +|...|+
T Consensus 91 ~~~~vlvHC~aG~~RTg~~~a~~l~~~g~ 119 (151)
T 1xri_A 91 KNHPVLIHCKRGKHRTGCLVGCLRKLQKW 119 (151)
T ss_dssp GGCSEEEECSSSSSHHHHHHHHHHHHTTB
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHhCC
Confidence 4679999999887 8776553 4444565
No 85
>1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5 PDB: 2oz5_A*
Probab=87.87 E-value=0.24 Score=45.38 Aligned_cols=54 Identities=20% Similarity=0.230 Sum_probs=33.2
Q ss_pred HHHhhhCCCCcccCHHHHHHHhcCCCcEEEEeCChhhhccc----ccCCe--EecCCCCC
Q 022409 82 WDALIRDGKVKVLTPREAGYAVQLSSKTLLDVRPSTERKKA----WIKGS--IWIPIFDI 135 (297)
Q Consensus 82 w~~~~~~~~~~~Is~eel~~~l~~~~~vlIDVRs~~Ef~~g----hIpGA--inIPl~~~ 135 (297)
|-.+.+.+....++++++..+.+.+=..|||.|++.|.... ..+|. +|+|+...
T Consensus 44 ~G~lyRS~~l~~lt~~d~~~L~~lGI~tVIDLR~~~E~~~~~pd~~~~Gi~~~~iPi~~~ 103 (296)
T 1ywf_A 44 PGRLFRSSELSRLDDAGRATLRRLGITDVADLRSSREVARRGPGRVPDGIDVHLLPFPDL 103 (296)
T ss_dssp TTSEEEESCCTTCCHHHHHHHHHHTCCEEEECCCHHHHHHHCSCCCCTTCEEEECCCCCS
T ss_pred CcceeccCCcccCCHHHHHHHHhCCCCEEEECcChhhhhccCCCCCCCCCEEEEecCccc
Confidence 33344445566677777665544344589999999886432 23453 67787653
No 86
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A
Probab=87.52 E-value=1.6 Score=37.30 Aligned_cols=28 Identities=21% Similarity=0.368 Sum_probs=20.8
Q ss_pred CCCeEEEEeCCCC-cHHH--HHHHHHHcCCC
Q 022409 179 KDTDLIVACQKGL-RSLA--ACELLYNAGYR 206 (297)
Q Consensus 179 kd~~IVvyC~~G~-RS~~--aa~~L~~~Gy~ 206 (297)
.+.+|+|+|..|. ||.. +|.+|...|++
T Consensus 130 ~~~~VLVHC~aG~sRS~tvv~aYLm~~~~~s 160 (205)
T 2pq5_A 130 PQGRVLVHCAMGVSRSATLVLAFLMIYENMT 160 (205)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHSCCC
T ss_pred CCCeEEEECCCCCcHHHHHHHHHHHHHcCCC
Confidence 5679999999885 8774 35567777763
No 87
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=87.00 E-value=0.89 Score=37.31 Aligned_cols=29 Identities=14% Similarity=0.335 Sum_probs=21.7
Q ss_pred CCCCeEEEEeCCCC-cHHH--HHHHHHHcCCC
Q 022409 178 PKDTDLIVACQKGL-RSLA--ACELLYNAGYR 206 (297)
Q Consensus 178 ~kd~~IVvyC~~G~-RS~~--aa~~L~~~Gy~ 206 (297)
..+.+|+|+|..|. ||.. +|.+|...|++
T Consensus 85 ~~~~~VlVHC~~G~sRS~~vv~ayLm~~~~~s 116 (161)
T 3emu_A 85 QRKEGVLIISGTGVNKAPAIVIAFLMYYQRLS 116 (161)
T ss_dssp HTTCEEEEEESSSSSHHHHHHHHHHHHHTTCC
T ss_pred hcCCeEEEEcCCCCcHHHHHHHHHHHHHhCCC
Confidence 35679999999886 8654 46777778874
No 88
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Probab=85.94 E-value=1.3 Score=35.52 Aligned_cols=28 Identities=21% Similarity=0.217 Sum_probs=17.9
Q ss_pred CCCeEEEEeCCCC-cHHHHH-HHHHHc-CCC
Q 022409 179 KDTDLIVACQKGL-RSLAAC-ELLYNA-GYR 206 (297)
Q Consensus 179 kd~~IVvyC~~G~-RS~~aa-~~L~~~-Gy~ 206 (297)
.+.+|+|+|..|. ||..++ ..|... |++
T Consensus 108 ~~~~vlVHC~aG~~RTg~~~a~~L~~~~~~~ 138 (167)
T 3s4o_A 108 PPPTIGVHCVAGLGRAPILVALALVEYGNVS 138 (167)
T ss_dssp CCCEEEEECSSSSSHHHHHHHHHHHHTTCCC
T ss_pred CCCcEEEECCCCCCHHHHHHHHHHHHhCCCC
Confidence 3679999999776 775433 333333 553
No 89
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Probab=85.90 E-value=2.5 Score=36.57 Aligned_cols=29 Identities=21% Similarity=0.379 Sum_probs=21.4
Q ss_pred CCCCeEEEEeCCCC-cHHH--HHHHHHHcCCC
Q 022409 178 PKDTDLIVACQKGL-RSLA--ACELLYNAGYR 206 (297)
Q Consensus 178 ~kd~~IVvyC~~G~-RS~~--aa~~L~~~Gy~ 206 (297)
..+.+|+|+|..|. ||.. +|.+|...|++
T Consensus 137 ~~~~~VLVHC~aG~sRS~tvv~aYLm~~~~~s 168 (219)
T 2y96_A 137 DDHSKILVHCVMGRSRSATLVLAYLMIHKDMT 168 (219)
T ss_dssp STTCCEEEECSSSSSHHHHHHHHHHHHHSCCC
T ss_pred ccCCeEEEECCCCCCHHHHHHHHHHHHHcCCC
Confidence 45679999999885 8775 45567777763
No 90
>2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR}
Probab=85.67 E-value=1.3 Score=37.47 Aligned_cols=28 Identities=25% Similarity=0.406 Sum_probs=19.2
Q ss_pred CCCeEEEEeCCCC-cHHHH--HHHHHHcCCC
Q 022409 179 KDTDLIVACQKGL-RSLAA--CELLYNAGYR 206 (297)
Q Consensus 179 kd~~IVvyC~~G~-RS~~a--a~~L~~~Gy~ 206 (297)
.+.+|+|+|..|. ||..+ +.++...|++
T Consensus 124 ~~~~VlVHC~aG~~RSg~~v~~yL~~~~~~~ 154 (195)
T 2q05_A 124 RNEPVLVHCAAGVNRSGAMILAYLMSKNKES 154 (195)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHCCSS
T ss_pred cCCcEEEEcCCCCChHHHHHHHHHHHHhCCC
Confidence 4679999999884 87654 4444556664
No 91
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Probab=85.12 E-value=2.6 Score=35.23 Aligned_cols=39 Identities=28% Similarity=0.356 Sum_probs=23.6
Q ss_pred HHHHHHHHhc--CCCCCeEEEEeCCCC-cHHHH-HHHHHHcCC
Q 022409 167 KQFLSKVEEK--LPKDTDLIVACQKGL-RSLAA-CELLYNAGY 205 (297)
Q Consensus 167 ~~f~~~~~~~--l~kd~~IVvyC~~G~-RS~~a-a~~L~~~Gy 205 (297)
.+|++.+.+. ..++.+|+|+|..|. ||..+ +.+|...|+
T Consensus 102 ~~~~~~i~~~~~~~~~~~VlVHC~aG~gRSg~~va~~L~~~g~ 144 (189)
T 3rz2_A 102 DDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIEGGM 144 (189)
T ss_dssp HHHHHHHHHHHHHSTTCEEEEECSSSSTTHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHhCCCCcEEEECCCCCCHHHHHHHHHHHHcCC
Confidence 4555555432 246679999999776 87653 333434555
No 92
>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A
Probab=81.01 E-value=2.8 Score=34.50 Aligned_cols=28 Identities=21% Similarity=0.265 Sum_probs=20.1
Q ss_pred CCCeEEEEeCCCC-cHHH--HHHHHHHcCCC
Q 022409 179 KDTDLIVACQKGL-RSLA--ACELLYNAGYR 206 (297)
Q Consensus 179 kd~~IVvyC~~G~-RS~~--aa~~L~~~Gy~ 206 (297)
.+.+|+|+|..|. ||.. ++.++...|++
T Consensus 107 ~~~~VlVHC~aG~~RSg~~v~aylm~~~~~~ 137 (176)
T 3cm3_A 107 RNEPVLVHSAAGVNRSGAMILAYLMSKNKES 137 (176)
T ss_dssp HTCCEEEECSSSSSHHHHHHHHHHHHHCCSS
T ss_pred CCCcEEEECCcCCCHHHHHHHHHHHHHhCCC
Confidence 4679999999774 8765 45666666764
No 93
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus}
Probab=80.15 E-value=2.4 Score=34.59 Aligned_cols=28 Identities=21% Similarity=0.248 Sum_probs=19.1
Q ss_pred CCCeEEEEeCCCC-cHHH--HHHHHHHcCCC
Q 022409 179 KDTDLIVACQKGL-RSLA--ACELLYNAGYR 206 (297)
Q Consensus 179 kd~~IVvyC~~G~-RS~~--aa~~L~~~Gy~ 206 (297)
.+.+|+|+|..|. |+.. ++.++...|++
T Consensus 112 ~~~~vlVHC~aG~~RTg~~va~~L~~~~~~~ 142 (169)
T 1yn9_A 112 PGMLVGVHCTHGINRTGYMVCRYLMHTLGIA 142 (169)
T ss_dssp TTSEEEEECSSSSHHHHHHHHHHHHHHHCCC
T ss_pred CCCcEEEECCCCCChHHHHHHHHHHHHhCCC
Confidence 5679999999886 7654 34444447763
No 94
>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB: 2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A*
Probab=80.13 E-value=3.7 Score=32.69 Aligned_cols=36 Identities=17% Similarity=0.314 Sum_probs=20.5
Q ss_pred HHHHHHHHhcCCCCCeEEEEeCCCC-cHHHH--HHHHHHcCC
Q 022409 167 KQFLSKVEEKLPKDTDLIVACQKGL-RSLAA--CELLYNAGY 205 (297)
Q Consensus 167 ~~f~~~~~~~l~kd~~IVvyC~~G~-RS~~a--a~~L~~~Gy 205 (297)
.++++.+.+...+ . +|+|..|. |+..+ +.++...|.
T Consensus 79 ~~~~~~i~~~~~~--~-lVHC~aG~~Rtg~~~~~~l~~~~~~ 117 (161)
T 2i6j_A 79 LTIMKWLLSEKEG--N-LVHCVGGIGRTGTILASYLILTEGL 117 (161)
T ss_dssp HHHHHHHHHCCTT--E-EEECSSSSHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHhCCC--C-EEECCCCCCHHHHHHHHHHHHHcCC
Confidence 4555555543332 3 99999885 87654 333434365
No 95
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=78.99 E-value=1.8 Score=34.41 Aligned_cols=28 Identities=25% Similarity=0.444 Sum_probs=20.6
Q ss_pred CCCeEEEEeCCCC-cHHHH--HHHHHHcCCC
Q 022409 179 KDTDLIVACQKGL-RSLAA--CELLYNAGYR 206 (297)
Q Consensus 179 kd~~IVvyC~~G~-RS~~a--a~~L~~~Gy~ 206 (297)
.+.+|+|+|..|. ||..+ +.++...|++
T Consensus 82 ~~~~VlVHC~~G~~RSg~~~~ayl~~~~~~~ 112 (149)
T 1zzw_A 82 CGKGLLIHCQAGVSRSATIVIAYLMKHTRMT 112 (149)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHHSCCC
T ss_pred cCCeEEEECCCCCCHHHHHHHHHHHHHcCCC
Confidence 5679999999884 88764 4566667763
No 96
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=78.43 E-value=1.8 Score=35.03 Aligned_cols=29 Identities=17% Similarity=0.275 Sum_probs=21.0
Q ss_pred CCCCeEEEEeCCC-CcHHHH--HHHHHHcCCC
Q 022409 178 PKDTDLIVACQKG-LRSLAA--CELLYNAGYR 206 (297)
Q Consensus 178 ~kd~~IVvyC~~G-~RS~~a--a~~L~~~Gy~ 206 (297)
.++.+|+|+|..| .||..+ |.++...|++
T Consensus 83 ~~~~~VlVHC~~G~~RS~~vv~ayLm~~~~~~ 114 (155)
T 2hxp_A 83 SQNCGVLVHSLAGVSRSVTVTVAYLMQKLHLS 114 (155)
T ss_dssp HTTCEEEEECSSSSSHHHHHHHHHHHHHHTCC
T ss_pred HcCCcEEEECCCCCchhHHHHHHHHHHHcCCC
Confidence 3567999999988 488753 5566667763
No 97
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=75.43 E-value=14 Score=29.89 Aligned_cols=38 Identities=24% Similarity=0.422 Sum_probs=23.4
Q ss_pred HHHHHHHHhcCCCCCeEEEEeCCCCcHHH-HHHHHHHcCCC
Q 022409 167 KQFLSKVEEKLPKDTDLIVACQKGLRSLA-ACELLYNAGYR 206 (297)
Q Consensus 167 ~~f~~~~~~~l~kd~~IVvyC~~G~RS~~-aa~~L~~~Gy~ 206 (297)
.++++.+.+...+ +|+|+|.+|.|... .+-.+...|.+
T Consensus 86 ~~~~~~i~~~~G~--dVLVnnAgg~r~~~l~~~~~~~~G~~ 124 (157)
T 3gxh_A 86 EAFFAAMDQHKGK--DVLVHCLANYRASAFAYLYQLKQGQN 124 (157)
T ss_dssp HHHHHHHHHTTTS--CEEEECSBSHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhcCCC--CEEEECCCCCCHHHHHHHHHHHcCCC
Confidence 4566666554543 99999998876443 33334456664
No 98
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=71.30 E-value=3 Score=34.46 Aligned_cols=28 Identities=25% Similarity=0.444 Sum_probs=20.3
Q ss_pred CCCeEEEEeCCCC-cHHHH--HHHHHHcCCC
Q 022409 179 KDTDLIVACQKGL-RSLAA--CELLYNAGYR 206 (297)
Q Consensus 179 kd~~IVvyC~~G~-RS~~a--a~~L~~~Gy~ 206 (297)
.+.+|+|+|..|. ||..+ |.+|...|++
T Consensus 86 ~~~~VlVHC~aG~~RSg~~v~ayLm~~~~~~ 116 (177)
T 2oud_A 86 CGKGLLIHCQAGVSRSATIVIAYLMKHTRMT 116 (177)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHTSCCC
T ss_pred cCCcEEEEcCCCCCchHHHHHHHHHHHcCCC
Confidence 5679999999884 88764 4556556763
No 99
>2jgn_A DBX, DDX3, ATP-dependent RNA helicase DDX3X; phosphorylation, nucleotide-binding, hydrolase, RNA-binding, ATP-binding, DNA-binding, nuclear protein; 1.91A {Homo sapiens}
Probab=68.45 E-value=6.2 Score=32.73 Aligned_cols=41 Identities=20% Similarity=0.242 Sum_probs=30.5
Q ss_pred cCCCCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHHH
Q 022409 176 KLPKDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLEA 217 (297)
Q Consensus 176 ~l~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~a 217 (297)
...++.++||||..-..+..++..|...|+. +..+.|++..
T Consensus 42 ~~~~~~k~lVF~~~~~~~~~l~~~L~~~g~~-~~~lhg~~~~ 82 (185)
T 2jgn_A 42 ATGKDSLTLVFVETKKGADSLEDFLYHEGYA-CTSIHGDRSQ 82 (185)
T ss_dssp HC-CCSCEEEEESCHHHHHHHHHHHHHTTCC-EEEEC-----
T ss_pred hcCCCCeEEEEECCHHHHHHHHHHHHHcCCc-eEEEeCCCCH
Confidence 4445678999999888899999999999995 9999998653
No 100
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=67.01 E-value=5.2 Score=36.25 Aligned_cols=27 Identities=22% Similarity=0.359 Sum_probs=19.2
Q ss_pred CCCeEEEEeCCCC-cHHH--HHHHHHHcCC
Q 022409 179 KDTDLIVACQKGL-RSLA--ACELLYNAGY 205 (297)
Q Consensus 179 kd~~IVvyC~~G~-RS~~--aa~~L~~~Gy 205 (297)
.+.+|+|+|..|. ||.. +|.+|...|+
T Consensus 105 ~g~~VLVHC~aG~sRS~tvv~ayLm~~~g~ 134 (294)
T 3nme_A 105 NGGVTYVHSTAGMGRAPAVALTYMFWVQGY 134 (294)
T ss_dssp HCSEEEEECSSSSSHHHHHHHHHHHHTSCC
T ss_pred CCCEEEEECCCCCchhHHHHHHHHHHHhCC
Confidence 3568999999887 8654 4555665676
No 101
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A
Probab=59.79 E-value=15 Score=34.20 Aligned_cols=36 Identities=25% Similarity=0.425 Sum_probs=23.2
Q ss_pred HHHHHHHhcCCCCCeEEEEeCCCC-cHHH--HHHHHHHcCCC
Q 022409 168 QFLSKVEEKLPKDTDLIVACQKGL-RSLA--ACELLYNAGYR 206 (297)
Q Consensus 168 ~f~~~~~~~l~kd~~IVvyC~~G~-RS~~--aa~~L~~~Gy~ 206 (297)
+|++.+. .++.+|+|+|..|. ||.. ++.++...|++
T Consensus 260 ~fi~~~~---~~~~~VLVHC~aG~gRTGtvvaayLm~~~g~s 298 (348)
T 1ohe_A 260 EFLDICE---NAEGAIAVHSKAGLGRTGTLIACYIMKHYRMT 298 (348)
T ss_dssp HHHHHHH---SCSSEEEEECSSSSHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHH---hCCCcEEEECCCCCChHHHHHHHHHHHHcCCC
Confidence 4555543 35679999999886 7654 34445446763
No 102
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=56.66 E-value=17 Score=32.17 Aligned_cols=30 Identities=20% Similarity=0.210 Sum_probs=24.9
Q ss_pred CeEEEEeCCCC---cHHHHHHHHHHcCCCCEEEc
Q 022409 181 TDLIVACQKGL---RSLAACELLYNAGYRNLFWV 211 (297)
Q Consensus 181 ~~IVvyC~~G~---RS~~aa~~L~~~Gy~nV~~L 211 (297)
.+|+|.|..|. ....+|++|.+.||+ |..+
T Consensus 59 ~~v~VlcG~GNNGGDGlv~AR~L~~~G~~-V~v~ 91 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGDGLVCARHLKLFGYN-PVVF 91 (246)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCC-EEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCe-EEEE
Confidence 58999998665 788999999999995 7543
No 103
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=56.59 E-value=33 Score=30.79 Aligned_cols=90 Identities=21% Similarity=0.265 Sum_probs=56.2
Q ss_pred cccCHHHHHHHhc----CCCcEEEEeCChhhhcccccCCeEecCCCCCcccccCCCCCccccccccCCccCCCCCccccH
Q 022409 92 KVLTPREAGYAVQ----LSSKTLLDVRPSTERKKAWIKGSIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTLSYNK 167 (297)
Q Consensus 92 ~~Is~eel~~~l~----~~~~vlIDVRs~~Ef~~ghIpGAinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~~~~~~ 167 (297)
..++.+++.++.+ .+=-+||+|.+..|.+..-=.|+--|-+. . +.+..+....
T Consensus 135 a~L~~~~l~~l~~~A~~lGl~~LvEVh~~~El~rAl~~~a~iIGIN---N--------------------RnL~tf~vdl 191 (258)
T 4a29_A 135 KILTERELESLLEYARSYGMEPLILINDENDLDIALRIGARFIGIM---S--------------------RDFETGEINK 191 (258)
T ss_dssp GGSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHHTTCSEEEEC---S--------------------BCTTTCCBCH
T ss_pred hhcCHHHHHHHHHHHHHHhHHHHHhcchHHHHHHHhcCCCcEEEEe---C--------------------CCccccccCH
Confidence 4566666665542 23347999999999876443344222111 1 1122233344
Q ss_pred HHHHHHHhcCCCCCeEEEEeCCCCcHHHHHHHHHHcCCC
Q 022409 168 QFLSKVEEKLPKDTDLIVACQKGLRSLAACELLYNAGYR 206 (297)
Q Consensus 168 ~f~~~~~~~l~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~ 206 (297)
+-..++...+|++ +++++.+|.++..-+..|...|++
T Consensus 192 ~~t~~L~~~ip~~--~~~VsESGI~t~~dv~~l~~~G~~ 228 (258)
T 4a29_A 192 ENQRKLISMIPSN--VVKVAKLGISERNEIEELRKLGVN 228 (258)
T ss_dssp HHHHHHHTTSCTT--SEEEEEESSCCHHHHHHHHHTTCC
T ss_pred HHHHHHHhhCCCC--CEEEEcCCCCCHHHHHHHHHCCCC
Confidence 4455666677754 466789999999999999999996
No 104
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Probab=53.48 E-value=13 Score=29.10 Aligned_cols=27 Identities=26% Similarity=0.379 Sum_probs=18.3
Q ss_pred CCCeEEEEeCCCC-cHHHH-HHHHHHcCC
Q 022409 179 KDTDLIVACQKGL-RSLAA-CELLYNAGY 205 (297)
Q Consensus 179 kd~~IVvyC~~G~-RS~~a-a~~L~~~Gy 205 (297)
++.+|+|+|..|. ||..+ +..|...|+
T Consensus 95 ~~~~vlVHC~aG~~Rtg~~~a~~l~~~~~ 123 (159)
T 1rxd_A 95 PGCCIAVHCVAGLGRAPVLVALALIEGGM 123 (159)
T ss_dssp TTCEEEEECSSSSTTHHHHHHHHHHHTTC
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHHhCC
Confidence 4679999999775 87653 334444565
No 105
>2rb4_A ATP-dependent RNA helicase DDX25; rossmann fold, structural genomics, structural consortium, SGC, alternative initiation, ATP-binding, devel protein; 2.80A {Homo sapiens}
Probab=51.99 E-value=14 Score=29.87 Aligned_cols=36 Identities=17% Similarity=0.174 Sum_probs=31.5
Q ss_pred CCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccH
Q 022409 179 KDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGL 215 (297)
Q Consensus 179 kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~ 215 (297)
+..++||||+.-..+..++..|...|+. +..+.|++
T Consensus 33 ~~~~~lVF~~~~~~~~~l~~~L~~~~~~-~~~~~g~~ 68 (175)
T 2rb4_A 33 TIGQAIIFCQTRRNAKWLTVEMIQDGHQ-VSLLSGEL 68 (175)
T ss_dssp CCSEEEEECSCHHHHHHHHHHHHTTTCC-EEEECSSC
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHcCCc-EEEEeCCC
Confidence 3568999999888899999999999995 99999985
No 106
>1fuk_A Eukaryotic initiation factor 4A; helicase, DEAD-box protein, translation; 1.75A {Saccharomyces cerevisiae} SCOP: c.37.1.19
Probab=51.40 E-value=17 Score=28.95 Aligned_cols=45 Identities=13% Similarity=0.212 Sum_probs=34.7
Q ss_pred HHHHHhcCCCCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHH
Q 022409 170 LSKVEEKLPKDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLE 216 (297)
Q Consensus 170 ~~~~~~~l~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~ 216 (297)
+..+.... ++.+++|||++-..+..++..|...|+. +..+.|++.
T Consensus 21 l~~ll~~~-~~~~~lVF~~~~~~~~~l~~~L~~~~~~-~~~~~~~~~ 65 (165)
T 1fuk_A 21 LTDLYDSI-SVTQAVIFCNTRRKVEELTTKLRNDKFT-VSAIYSDLP 65 (165)
T ss_dssp HHHHHHHT-TCSCEEEEESSHHHHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred HHHHHHhC-CCCCEEEEECCHHHHHHHHHHHHHcCCC-EEEEECCCC
Confidence 33333333 3468999999888899999999999995 888999853
No 107
>2hjv_A ATP-dependent RNA helicase DBPA; parallel alpha-beta, hydrolase; 1.95A {Bacillus subtilis}
Probab=50.87 E-value=11 Score=30.26 Aligned_cols=37 Identities=19% Similarity=0.285 Sum_probs=31.8
Q ss_pred CCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHH
Q 022409 179 KDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLE 216 (297)
Q Consensus 179 kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~ 216 (297)
+..+++|||+.-..+..++..|...|+. +..+.|++.
T Consensus 34 ~~~~~lVF~~~~~~~~~l~~~L~~~~~~-~~~~hg~~~ 70 (163)
T 2hjv_A 34 NPDSCIIFCRTKEHVNQLTDELDDLGYP-CDKIHGGMI 70 (163)
T ss_dssp CCSSEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred CCCcEEEEECCHHHHHHHHHHHHHcCCc-EEEEeCCCC
Confidence 3458999999888899999999999995 989999853
No 108
>3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4; 1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A* 3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A
Probab=48.96 E-value=29 Score=32.16 Aligned_cols=87 Identities=15% Similarity=0.142 Sum_probs=46.6
Q ss_pred CHHHHHHHhc---CCCcEEEEeCChhhhcccccCC-eEecCCCCCcccccCCCCCccccccccCCccCCCCCccccHHHH
Q 022409 95 TPREAGYAVQ---LSSKTLLDVRPSTERKKAWIKG-SIWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTLSYNKQFL 170 (297)
Q Consensus 95 s~eel~~~l~---~~~~vlIDVRs~~Ef~~ghIpG-AinIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~~~~~~~f~ 170 (297)
..+++...++ .+...+++++++..|+...+.+ -.++|+.+. +.+......+|+
T Consensus 51 ~i~dv~~~L~~~h~~~y~V~NL~sE~~Yd~~~f~~~v~~~p~pD~-----------------------~~P~~~~l~~~~ 107 (339)
T 3v0d_A 51 PIGEVSRFFKTKHPDKFRIYNLCSERGYDETKFDNHVYRVMIDDH-----------------------NVPTLVDLLKFI 107 (339)
T ss_dssp EHHHHHHHHHHHSTTCEEEEEEETTCCCCGGGGTTCEEEEEECTT-----------------------SCCCHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCceEEEECCCCCCCChHHcCCeEEEeccCCC-----------------------CCCCHHHHHHHH
Confidence 4455554443 3568899998776676544433 234443321 111122334555
Q ss_pred HHHHhcC--CCCCeEEEEeCCCC-cHH-HHHHHHHHcC
Q 022409 171 SKVEEKL--PKDTDLIVACQKGL-RSL-AACELLYNAG 204 (297)
Q Consensus 171 ~~~~~~l--~kd~~IVvyC~~G~-RS~-~aa~~L~~~G 204 (297)
+.+..-+ +++.+|+|+|..|. |+. .+|.+|-..|
T Consensus 108 ~~v~~~l~~~~~~~v~vHC~~G~gRtg~~ia~~Li~~~ 145 (339)
T 3v0d_A 108 DDAKVWMTSDPDHVIAIHSKGGKGRTGTLVSSWLLEDG 145 (339)
T ss_dssp HHHHHHHHTCTTCEEEEECSSSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCCCCeEEEEeCCCCcchHHHHHHHHHHhc
Confidence 5555332 34569999999776 654 3444444444
No 109
>2i4i_A ATP-dependent RNA helicase DDX3X; DEAD, structural genomics, SGC, structural GE consortium, hydrolase; HET: AMP; 2.20A {Homo sapiens}
Probab=47.28 E-value=21 Score=32.38 Aligned_cols=48 Identities=21% Similarity=0.274 Sum_probs=37.6
Q ss_pred HHHHHHHhcCCCCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHH
Q 022409 168 QFLSKVEEKLPKDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLE 216 (297)
Q Consensus 168 ~f~~~~~~~l~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~ 216 (297)
+.+..+.....++.+++|||.+-..+..++..|.+.|+. +..+.|++.
T Consensus 264 ~~l~~~l~~~~~~~~~lVf~~~~~~~~~l~~~L~~~~~~-~~~~h~~~~ 311 (417)
T 2i4i_A 264 SFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYA-CTSIHGDRS 311 (417)
T ss_dssp HHHHHHHHTCCTTCEEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred HHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHHCCCC-eeEecCCCC
Confidence 334444445556778999999888899999999999995 999998854
No 110
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=46.96 E-value=16 Score=32.55 Aligned_cols=31 Identities=10% Similarity=0.238 Sum_probs=25.0
Q ss_pred CCeEEEEeCCCC---cHHHHHHHHHHcCCCCEEEc
Q 022409 180 DTDLIVACQKGL---RSLAACELLYNAGYRNLFWV 211 (297)
Q Consensus 180 d~~IVvyC~~G~---RS~~aa~~L~~~Gy~nV~~L 211 (297)
..+|+|+|..|. ....+|++|...||+ |..+
T Consensus 85 ~~~vlVlcG~GNNGGDGlv~AR~L~~~G~~-V~v~ 118 (259)
T 3d3k_A 85 RPTVALLCGPHVKGAQGISCGRHLANHDVQ-VILF 118 (259)
T ss_dssp CCEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEEE
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHCCCe-EEEE
Confidence 358999998665 788999999999995 6543
No 111
>1t5i_A C_terminal domain of A probable ATP-dependent RNA helicase; RECA-like fold, PRE-mRNA processing protein; 1.90A {Homo sapiens} SCOP: c.37.1.19
Probab=46.16 E-value=14 Score=30.02 Aligned_cols=37 Identities=14% Similarity=0.291 Sum_probs=31.9
Q ss_pred CCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHH
Q 022409 179 KDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLE 216 (297)
Q Consensus 179 kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~ 216 (297)
+..++||||+.-..+..++..|...|+. +..+.|++.
T Consensus 30 ~~~~~lVF~~~~~~~~~l~~~L~~~~~~-~~~~hg~~~ 66 (172)
T 1t5i_A 30 EFNQVVIFVKSVQRCIALAQLLVEQNFP-AIAIHRGMP 66 (172)
T ss_dssp CCSSEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred CCCcEEEEECCHHHHHHHHHHHHhcCCC-EEEEECCCC
Confidence 3468999999888899999999999995 888999863
No 112
>1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol, hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1 c.45.1.1
Probab=44.37 E-value=41 Score=30.53 Aligned_cols=38 Identities=21% Similarity=0.333 Sum_probs=22.5
Q ss_pred HHHHHHHHhcC--CCCCeEEEEeCCCC-cHHH--HHHHHHHcC
Q 022409 167 KQFLSKVEEKL--PKDTDLIVACQKGL-RSLA--ACELLYNAG 204 (297)
Q Consensus 167 ~~f~~~~~~~l--~kd~~IVvyC~~G~-RS~~--aa~~L~~~G 204 (297)
..|++.+.+-+ .++.+|+|+|..|. |+.. ++.++...+
T Consensus 96 ~~~~~~i~~~l~~~~~~~VlVHC~aG~gRTGt~ia~yL~~~~~ 138 (324)
T 1d5r_A 96 KPFCEDLDQWLSEDDNHVAAIHCKAGKGRTGVMICAYLLHRGK 138 (324)
T ss_dssp HHHHHHHHHHHTTTSCSEEEEECSSSSHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHhcCCCeEEEECCCCCChhHHHHHHHHHHhcC
Confidence 45555554433 34579999999776 7653 444444444
No 113
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=44.18 E-value=18 Score=33.05 Aligned_cols=30 Identities=10% Similarity=0.249 Sum_probs=24.6
Q ss_pred CeEEEEeCCCC---cHHHHHHHHHHcCCCCEEEc
Q 022409 181 TDLIVACQKGL---RSLAACELLYNAGYRNLFWV 211 (297)
Q Consensus 181 ~~IVvyC~~G~---RS~~aa~~L~~~Gy~nV~~L 211 (297)
.+|+|.|..|. ....+|++|...||+ |..+
T Consensus 133 ~~vlVlcG~GNNGGDGlv~AR~L~~~G~~-V~V~ 165 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQGISCGRHLANHDVQ-VILF 165 (306)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCc-EEEE
Confidence 48999998665 788999999999995 6543
No 114
>4h3k_B RNA polymerase II subunit A C-terminal domain PHO SSU72; heat repeat, phosphatase, RNA polymerase II, hydrolase; HET: SEP; 2.00A {Homo sapiens} PDB: 3o2q_B* 4h3h_B* 3o2s_B
Probab=43.44 E-value=23 Score=30.90 Aligned_cols=29 Identities=21% Similarity=0.325 Sum_probs=25.0
Q ss_pred eEEEEeCCCC-cHHHHHHHHHHcCCCCEEEc
Q 022409 182 DLIVACQKGL-RSLAACELLYNAGYRNLFWV 211 (297)
Q Consensus 182 ~IVvyC~~G~-RS~~aa~~L~~~Gy~nV~~L 211 (297)
.+.+.|.+.+ ||..|-..|.+.|| +|.-+
T Consensus 27 r~avVCaSN~NRSMEAH~~L~k~Gf-~V~Sf 56 (214)
T 4h3k_B 27 RVAVVSSSNQNRSMEAHNILSKRGF-SVRSF 56 (214)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHTTC-EEEEE
T ss_pred eEEEECCCCcchhHHHHHHHHHCCC-ceEee
Confidence 5889999665 99999999999999 57765
No 115
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=42.86 E-value=19 Score=32.26 Aligned_cols=30 Identities=23% Similarity=0.330 Sum_probs=24.8
Q ss_pred CeEEEEeCCCC---cHHHHHHHHHHcCCCCEEEc
Q 022409 181 TDLIVACQKGL---RSLAACELLYNAGYRNLFWV 211 (297)
Q Consensus 181 ~~IVvyC~~G~---RS~~aa~~L~~~Gy~nV~~L 211 (297)
.+|+|.|..|. ....+|+.|...||+ |..+
T Consensus 80 ~~VlVlcG~GNNGGDGlv~AR~L~~~G~~-V~V~ 112 (265)
T 2o8n_A 80 PTVLVICGPGNNGGDGLVCARHLKLFGYQ-PTIY 112 (265)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCc-EEEE
Confidence 58999998665 788999999999995 6543
No 116
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=42.25 E-value=18 Score=27.98 Aligned_cols=34 Identities=15% Similarity=0.208 Sum_probs=23.9
Q ss_pred CCCCeEEEEeCCCCcHHHHHHHHHH----cCCCCEEEcc
Q 022409 178 PKDTDLIVACQKGLRSLAACELLYN----AGYRNLFWVQ 212 (297)
Q Consensus 178 ~kd~~IVvyC~~G~RS~~aa~~L~~----~Gy~nV~~L~ 212 (297)
.+..+|++.|.+|+-+..++.-+++ .|++ +-...
T Consensus 4 ~~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~-v~i~a 41 (108)
T 3nbm_A 4 SKELKVLVLCAGSGTSAQLANAINEGANLTEVR-VIANS 41 (108)
T ss_dssp -CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCS-EEEEE
T ss_pred ccCceEEEECCCCCCHHHHHHHHHHHHHHCCCc-eEEEE
Confidence 3556899999999977777766654 6885 65543
No 117
>2b49_A Protein tyrosine phosphatase, non-receptor type 3; human, STRU genomics, structural genomics consortium, SGC, hydrolase; 1.54A {Homo sapiens}
Probab=40.63 E-value=25 Score=31.41 Aligned_cols=31 Identities=19% Similarity=0.366 Sum_probs=21.7
Q ss_pred HHHHHHHHhcCCCCCeEEEEeCCCC-cHHHHH
Q 022409 167 KQFLSKVEEKLPKDTDLIVACQKGL-RSLAAC 197 (297)
Q Consensus 167 ~~f~~~~~~~l~kd~~IVvyC~~G~-RS~~aa 197 (297)
-+|++.+......+.||||+|..|. |+...+
T Consensus 196 l~~i~~v~~~~~~~~PivVHCsaGvGRTGtfi 227 (287)
T 2b49_A 196 LEFVNYVRSLRVDSEPVLVHCSAGIGRTGVLV 227 (287)
T ss_dssp HHHHHHHHHHCCTTCCEEEECSSSSHHHHHHH
T ss_pred HHHHHHHHHhccCCCcEEEEcCCCCcHHHHHH
Confidence 3566666655555689999999776 876654
No 118
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=40.47 E-value=86 Score=28.03 Aligned_cols=38 Identities=16% Similarity=0.298 Sum_probs=28.6
Q ss_pred HHHHHHHHhcCCCCCeEEEEeCCCCcHHHHHHHHHHcCCC
Q 022409 167 KQFLSKVEEKLPKDTDLIVACQKGLRSLAACELLYNAGYR 206 (297)
Q Consensus 167 ~~f~~~~~~~l~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~ 206 (297)
.+...++...++++ ++++|.+|..+..-+..+.++|++
T Consensus 207 l~~~~~L~~~ip~~--~~vIaesGI~t~edv~~l~~~Ga~ 244 (272)
T 3tsm_A 207 LAVSERLAKMAPSD--RLLVGESGIFTHEDCLRLEKSGIG 244 (272)
T ss_dssp THHHHHHHHHSCTT--SEEEEESSCCSHHHHHHHHTTTCC
T ss_pred hHHHHHHHHhCCCC--CcEEEECCCCCHHHHHHHHHcCCC
Confidence 34445555567654 566689999999999999999996
No 119
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} SCOP: c.37.1.1 PDB: 2axp_A*
Probab=38.73 E-value=7.3 Score=30.75 Aligned_cols=26 Identities=12% Similarity=0.055 Sum_probs=21.5
Q ss_pred ccccCcccCcccchhhhcccchhcCCC
Q 022409 233 FAGIGGLSEFLGYTSQLCYPFLHISYP 259 (297)
Q Consensus 233 ~~~~~G~t~~~gkT~~l~~l~~~~g~~ 259 (297)
+.++.|.. |+|||-+.+.|+++.||+
T Consensus 3 ~i~l~G~~-GsGKsT~~~~L~~~l~~~ 28 (173)
T 3kb2_A 3 LIILEGPD-CCFKSTVAAKLSKELKYP 28 (173)
T ss_dssp EEEEECSS-SSSHHHHHHHHHHHHCCC
T ss_pred EEEEECCC-CCCHHHHHHHHHHHhCCe
Confidence 56778888 599999999996666886
No 120
>3rof_A Low molecular weight protein-tyrosine-phosphatase; phosphatase, hydrolase; 1.03A {Staphylococcus aureus}
Probab=38.71 E-value=17 Score=29.99 Aligned_cols=39 Identities=15% Similarity=0.212 Sum_probs=29.0
Q ss_pred CeEEEEeCCCC-cHHHHHHHHHHc----CCCCEEEccccHHHHH
Q 022409 181 TDLIVACQKGL-RSLAACELLYNA----GYRNLFWVQGGLEAAE 219 (297)
Q Consensus 181 ~~IVvyC~~G~-RS~~aa~~L~~~----Gy~nV~~L~GG~~aw~ 219 (297)
.+|+|.|.+.. ||..|..+|++. |..++.....|...|.
T Consensus 7 ~~vLFVC~gN~cRSpmAE~i~~~~~~~~gl~~~~v~SAGt~~~~ 50 (158)
T 3rof_A 7 VDVAFVCLGNICRSPMAEAIMRQRLKDRNIHDIKVHSRGTGSWN 50 (158)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCCSEEEEEEETTCCS
T ss_pred CEEEEEeCCchhHHHHHHHHHHHHHHHcCCCCeEEEecccCCcc
Confidence 37999999665 999988887764 6655666677777763
No 121
>2cwd_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus}
Probab=38.62 E-value=17 Score=29.84 Aligned_cols=40 Identities=18% Similarity=0.206 Sum_probs=29.6
Q ss_pred CCeEEEEeCCCC-cHHHHHHHHHHc----CC-CCEEEccccHHHHH
Q 022409 180 DTDLIVACQKGL-RSLAACELLYNA----GY-RNLFWVQGGLEAAE 219 (297)
Q Consensus 180 d~~IVvyC~~G~-RS~~aa~~L~~~----Gy-~nV~~L~GG~~aw~ 219 (297)
..+|+|.|.+.. ||..|-.+|++. |. +++.....|...|.
T Consensus 4 ~~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~~ 49 (161)
T 2cwd_A 4 PVRVLFVCLGNICRSPMAEGIFRKLLKERGLEDRFEVDSAGTGAWH 49 (161)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHHHHHTCTTTEEEEEEESSCTT
T ss_pred CCEEEEECCCcHHHHHHHHHHHHHHHHHcCCCCcEEEEecccCCCc
Confidence 347999999665 999988888774 55 35667777877764
No 122
>3eaq_A Heat resistant RNA dependent ATPase; DEAD box RNA helicase, dimer, ATP-binding, helicase, hydrolase, nucleotide-binding; 2.30A {Thermus thermophilus} PDB: 3ear_A 3eas_A
Probab=38.36 E-value=20 Score=30.17 Aligned_cols=35 Identities=14% Similarity=0.090 Sum_probs=30.8
Q ss_pred CCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccH
Q 022409 180 DTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGL 215 (297)
Q Consensus 180 d~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~ 215 (297)
..+++|||++-..+..++..|...|+. +..+.|++
T Consensus 31 ~~~~lVF~~~~~~~~~l~~~L~~~~~~-~~~lhg~~ 65 (212)
T 3eaq_A 31 PDRAMVFTRTKAETEEIAQGLLRLGHP-AQALHGDL 65 (212)
T ss_dssp CSCEEEECSSHHHHHHHHHHHHHHTCC-EEEECSSS
T ss_pred CCeEEEEeCCHHHHHHHHHHHHHcCCC-EEEEECCC
Confidence 568999999877888999999999995 88999984
No 123
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii}
Probab=36.72 E-value=8.1 Score=31.21 Aligned_cols=27 Identities=19% Similarity=-0.225 Sum_probs=22.4
Q ss_pred cccccCcccCcccchhhhcccchhcCCC
Q 022409 232 KFAGIGGLSEFLGYTSQLCYPFLHISYP 259 (297)
Q Consensus 232 ~~~~~~G~t~~~gkT~~l~~l~~~~g~~ 259 (297)
+..++.|.+ |+|||-+-+.|+++.|++
T Consensus 6 ~~i~l~G~~-GsGKst~a~~La~~l~~~ 32 (185)
T 3trf_A 6 TNIYLIGLM-GAGKTSVGSQLAKLTKRI 32 (185)
T ss_dssp CEEEEECST-TSSHHHHHHHHHHHHCCC
T ss_pred CEEEEECCC-CCCHHHHHHHHHHHhCCC
Confidence 456788888 599999999997666996
No 124
>3p9y_A CG14216, LD40846P; phosphatase, CIS proline, LMW PTP-like fold, RNA polymerase hydrolase; HET: N7P SEP SET IMD PG4; 2.10A {Drosophila melanogaster} PDB: 3fdf_A 3fmv_A 3omx_A 3omw_A
Probab=36.43 E-value=35 Score=29.43 Aligned_cols=30 Identities=23% Similarity=0.321 Sum_probs=24.9
Q ss_pred CeEEEEeCCCC-cHHHHHHHHHHcCCCCEEEc
Q 022409 181 TDLIVACQKGL-RSLAACELLYNAGYRNLFWV 211 (297)
Q Consensus 181 ~~IVvyC~~G~-RS~~aa~~L~~~Gy~nV~~L 211 (297)
-.+.+.|.+.+ ||..|-.+|++.|| +|.-+
T Consensus 10 l~~avVCaSN~NRSMEaH~~L~k~G~-~V~Sf 40 (198)
T 3p9y_A 10 LAVAVVDSSNMNRSMEAHNFLAKKGF-NVRSY 40 (198)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHTTC-EEEEE
T ss_pred ceEEEEcCCCCcccHHHHHHHHhCCC-ceeec
Confidence 37899999555 99999999999999 47654
No 125
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=35.60 E-value=24 Score=34.55 Aligned_cols=30 Identities=17% Similarity=0.284 Sum_probs=24.9
Q ss_pred CCCeEEEEeCCCC---cHHHHHHHHHHcCCCCEE
Q 022409 179 KDTDLIVACQKGL---RSLAACELLYNAGYRNLF 209 (297)
Q Consensus 179 kd~~IVvyC~~G~---RS~~aa~~L~~~Gy~nV~ 209 (297)
+..+|+|+|..|+ ....+|++|.+.||+ |.
T Consensus 51 ~~~~v~VlcG~GNNGGDGlv~AR~L~~~G~~-V~ 83 (502)
T 3rss_A 51 SDYRFLVLCGGGNNGGDGFVVARNLLGVVKD-VL 83 (502)
T ss_dssp TTCEEEEEECSSHHHHHHHHHHHHHTTTSSE-EE
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCe-EE
Confidence 4568999998665 788999999999995 64
No 126
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=34.80 E-value=33 Score=27.98 Aligned_cols=33 Identities=15% Similarity=0.203 Sum_probs=24.7
Q ss_pred CCCeEEEEeCCCC----cHHHHHHHHHHcCCCCEEEcc
Q 022409 179 KDTDLIVACQKGL----RSLAACELLYNAGYRNLFWVQ 212 (297)
Q Consensus 179 kd~~IVvyC~~G~----RS~~aa~~L~~~Gy~nV~~L~ 212 (297)
+..+|++.|-+|- ....++..|+..||+ |..|-
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~G~e-Vi~lG 53 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDAGFE-VVYTG 53 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHTTCE-EECCC
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHCCCE-EEECC
Confidence 4457888886543 567889999999995 87663
No 127
>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B
Probab=33.87 E-value=37 Score=26.81 Aligned_cols=37 Identities=19% Similarity=0.041 Sum_probs=27.1
Q ss_pred CeEEEEeCCCC-cHHHHHHHHHHcCCCCEEEccccHHH
Q 022409 181 TDLIVACQKGL-RSLAACELLYNAGYRNLFWVQGGLEA 217 (297)
Q Consensus 181 ~~IVvyC~~G~-RS~~aa~~L~~~Gy~nV~~L~GG~~a 217 (297)
++|+|.|.+.. ||..|..+|+...=.++.....|...
T Consensus 4 ~~VLFVC~gN~cRSpmAEai~~~~~~~~~~v~SAGt~~ 41 (139)
T 1jl3_A 4 KIIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGIEA 41 (139)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHSCTTEEEEEEESSC
T ss_pred CeEEEEcCCchHHHHHHHHHHHHhCCCCEEEEcCcCCC
Confidence 37999999665 99999999998743346666666543
No 128
>2p6n_A ATP-dependent RNA helicase DDX41; DEAD, structural genomics, structural genomic consortium, SGC, hydrolase; 2.60A {Homo sapiens}
Probab=33.42 E-value=27 Score=28.95 Aligned_cols=35 Identities=20% Similarity=0.221 Sum_probs=30.6
Q ss_pred CCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccH
Q 022409 180 DTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGL 215 (297)
Q Consensus 180 d~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~ 215 (297)
..++||||+.-..+..++..|...|+. +..+.|++
T Consensus 54 ~~~~lVF~~~~~~~~~l~~~L~~~g~~-~~~lhg~~ 88 (191)
T 2p6n_A 54 PPPVLIFAEKKADVDAIHEYLLLKGVE-AVAIHGGK 88 (191)
T ss_dssp CSCEEEECSCHHHHHHHHHHHHHHTCC-EEEECTTS
T ss_pred CCCEEEEECCHHHHHHHHHHHHHcCCc-EEEEeCCC
Confidence 347999999888899999999999995 88899984
No 129
>1u2p_A Ptpase, low molecular weight protein-tyrosine- phosphatase; hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 1u2q_A
Probab=33.37 E-value=22 Score=29.11 Aligned_cols=38 Identities=16% Similarity=0.215 Sum_probs=28.2
Q ss_pred CeEEEEeCCCC-cHHHHHHHHHHc----CCC-CEEEccccHHHH
Q 022409 181 TDLIVACQKGL-RSLAACELLYNA----GYR-NLFWVQGGLEAA 218 (297)
Q Consensus 181 ~~IVvyC~~G~-RS~~aa~~L~~~----Gy~-nV~~L~GG~~aw 218 (297)
.+|+|.|.+.. ||..|-.+|++. |.. ++.....|..+|
T Consensus 5 ~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~ 48 (163)
T 1u2p_A 5 LHVTFVCTGNICRSPMAEKMFAQQLRHRGLGDAVRVTSAGTGNW 48 (163)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCT
T ss_pred CEEEEEcCCcHhHHHHHHHHHHHHHHHCCCCCcEEEEecccCCC
Confidence 47999999665 999988888775 543 366667777766
No 130
>4fak_A Ribosomal RNA large subunit methyltransferase H; alpha/beta methyltransferase rossmann fold, rRNA methylation rRNA, ribosomal protein; HET: SAM PG4; 1.70A {Staphylococcus aureus} PDB: 1vh0_A
Probab=32.45 E-value=48 Score=27.55 Aligned_cols=42 Identities=21% Similarity=0.331 Sum_probs=32.5
Q ss_pred HHhcCCCCCeEEEEeCCCC--cHHHHHHHHHH---cCCCCEEEcccc
Q 022409 173 VEEKLPKDTDLIVACQKGL--RSLAACELLYN---AGYRNLFWVQGG 214 (297)
Q Consensus 173 ~~~~l~kd~~IVvyC~~G~--RS~~aa~~L~~---~Gy~nV~~L~GG 214 (297)
+.+.++++.-+|+.|-.|. .|...|..|.+ .|..++..+-||
T Consensus 67 il~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~g~~~i~FvIGG 113 (163)
T 4fak_A 67 ILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGG 113 (163)
T ss_dssp HHHTCCTTSEEEEEEEEEEECCHHHHHHHHHHHHHTTCCEEEEEECB
T ss_pred HHHhCCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCcceEEEEEC
Confidence 4456777777888887665 79999998887 577778888887
No 131
>3rh0_A Arsenate reductase; oxidoreductase; 1.72A {Corynebacterium glutamicum}
Probab=32.40 E-value=40 Score=27.31 Aligned_cols=35 Identities=14% Similarity=0.143 Sum_probs=25.4
Q ss_pred CeEEEEeCCCC-cHHHHHHHHHHcCCCCEEEccccH
Q 022409 181 TDLIVACQKGL-RSLAACELLYNAGYRNLFWVQGGL 215 (297)
Q Consensus 181 ~~IVvyC~~G~-RS~~aa~~L~~~Gy~nV~~L~GG~ 215 (297)
.+|+|.|.+.. ||..|..+|+++.-+++.....|.
T Consensus 21 ~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt 56 (148)
T 3rh0_A 21 KSVLFVCVGNGGKSQMAAALAQKYASDSVEIHSAGT 56 (148)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHCCTTSEEEEEES
T ss_pred CEEEEECCCchhHHHHHHHHHHHhcCCCEEEEeccc
Confidence 47999999665 999999999987534444444444
No 132
>3vaa_A Shikimate kinase, SK; structural genomics, center for structural genomics of infec diseases, csgid, metal binding, transferase; 1.70A {Bacteroides thetaiotaomicron}
Probab=32.10 E-value=11 Score=31.05 Aligned_cols=29 Identities=14% Similarity=-0.081 Sum_probs=24.2
Q ss_pred CCcccccCcccCcccchhhhcccchhcCCC
Q 022409 230 PLKFAGIGGLSEFLGYTSQLCYPFLHISYP 259 (297)
Q Consensus 230 ~~~~~~~~G~t~~~gkT~~l~~l~~~~g~~ 259 (297)
+.+..++.|.+ |.|||-+.+.|+++.|++
T Consensus 24 ~~~~i~l~G~~-GsGKsTl~~~La~~l~~~ 52 (199)
T 3vaa_A 24 AMVRIFLTGYM-GAGKTTLGKAFARKLNVP 52 (199)
T ss_dssp CCCEEEEECCT-TSCHHHHHHHHHHHHTCC
T ss_pred CCCEEEEEcCC-CCCHHHHHHHHHHHcCCC
Confidence 45677888998 599999999997777985
No 133
>1zuh_A Shikimate kinase; alpha-beta protein, transferase; 1.80A {Helicobacter pylori} PDB: 1zui_A* 3hr7_A 3muf_A* 3mrs_A 3n2e_A*
Probab=31.63 E-value=11 Score=30.01 Aligned_cols=28 Identities=14% Similarity=-0.041 Sum_probs=22.3
Q ss_pred CcccccCcccCcccchhhhcccchhcCCC
Q 022409 231 LKFAGIGGLSEFLGYTSQLCYPFLHISYP 259 (297)
Q Consensus 231 ~~~~~~~G~t~~~gkT~~l~~l~~~~g~~ 259 (297)
.+..++.|.. |+|||-+-+.|+++.|+|
T Consensus 7 ~~~i~l~G~~-GsGKSTva~~La~~lg~~ 34 (168)
T 1zuh_A 7 MQHLVLIGFM-GSGKSSLAQELGLALKLE 34 (168)
T ss_dssp -CEEEEESCT-TSSHHHHHHHHHHHHTCC
T ss_pred cceEEEECCC-CCCHHHHHHHHHHHhCCC
Confidence 4566788887 599999999996667996
No 134
>3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2 domain, hydrolase; 2.20A {Bos taurus}
Probab=31.58 E-value=1.2e+02 Score=28.29 Aligned_cols=85 Identities=12% Similarity=0.044 Sum_probs=44.9
Q ss_pred HHHHHHhc---CCCcEEEEeCChhhhcccccCCe-EecCCCCCcccccCCCCCccccccccCCccCCCCCccccHHHHHH
Q 022409 97 REAGYAVQ---LSSKTLLDVRPSTERKKAWIKGS-IWIPIFDIDDTFDAGSLPQKVTNFVMGGWWSGVPTLSYNKQFLSK 172 (297)
Q Consensus 97 eel~~~l~---~~~~vlIDVRs~~Ef~~ghIpGA-inIPl~~~~e~~~~gtl~k~~~~~~~~~~w~G~~~~~~~~~f~~~ 172 (297)
+++...++ .+.+.+++++ +..|+...+.+. .++|+.+- +.+......+|++.
T Consensus 50 ~~v~~~L~~~H~~~y~V~NLs-e~~Yd~~~f~~~V~~~~~pD~-----------------------~~P~l~~l~~~~~~ 105 (361)
T 3n0a_A 50 DDIRSFLDSRHLDHYTVYNLS-PKSYRTAKFHSRVSECSWPIR-----------------------QAPSLHNLFAVCRN 105 (361)
T ss_dssp HHHHHHHHHHHTTCEEEEECS-SSCCGGGSCGGGEEECCCCSS-----------------------SCCCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCeEEEEECC-CCCCChhhcCCcEEEeecCCC-----------------------CCCCHHHHHHHHHH
Confidence 44444443 3578899995 456766555443 34443321 11212233445555
Q ss_pred HHhcC--CCCCeEEEEeCCCC-cHH-HHHHHHHHcCC
Q 022409 173 VEEKL--PKDTDLIVACQKGL-RSL-AACELLYNAGY 205 (297)
Q Consensus 173 ~~~~l--~kd~~IVvyC~~G~-RS~-~aa~~L~~~Gy 205 (297)
+..-+ +++.+|+|+|..|. |+. .+|.+|-..|.
T Consensus 106 i~~~l~~~~~~~v~VHC~aG~GRtg~~ia~~Li~~~~ 142 (361)
T 3n0a_A 106 MYNWLLQNPKNVCVVHCLDGRAASSILVGAMFIFCNL 142 (361)
T ss_dssp HHHHHHHCTTCEEEEEECSCTHHHHHHHHHHHHHTTS
T ss_pred HHHHHhcCCCCeEEEEeCCCCccHHHHHHHHHHHhcC
Confidence 54322 34568999999776 654 34445555443
No 135
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=30.30 E-value=24 Score=26.81 Aligned_cols=28 Identities=7% Similarity=0.304 Sum_probs=18.8
Q ss_pred CCCeEEEEeCCCCcHHHHHHHHH----HcCCC
Q 022409 179 KDTDLIVACQKGLRSLAACELLY----NAGYR 206 (297)
Q Consensus 179 kd~~IVvyC~~G~RS~~aa~~L~----~~Gy~ 206 (297)
+.-+|++.|.+|+-+..++..|+ +.|++
T Consensus 3 ~~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~ 34 (109)
T 2l2q_A 3 GSMNILLVCGAGMSTSMLVQRIEKYAKSKNIN 34 (109)
T ss_dssp CCEEEEEESSSSCSSCHHHHHHHHHHHHHTCS
T ss_pred CceEEEEECCChHhHHHHHHHHHHHHHHCCCC
Confidence 33469999999985446555544 56874
No 136
>1wp9_A ATP-dependent RNA helicase, putative; ATPase, DNA replication, DNA repair, DNA recombina hydrolase; 2.90A {Pyrococcus furiosus} SCOP: c.37.1.19 c.37.1.19
Probab=30.25 E-value=42 Score=30.33 Aligned_cols=35 Identities=14% Similarity=0.136 Sum_probs=30.4
Q ss_pred CCCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccc
Q 022409 178 PKDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQG 213 (297)
Q Consensus 178 ~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~G 213 (297)
.++.+++|||..-..+..++..|...|++ +..+.|
T Consensus 359 ~~~~k~lVF~~~~~~~~~l~~~L~~~~~~-~~~~~g 393 (494)
T 1wp9_A 359 KQNSKIIVFTNYRETAKKIVNELVKDGIK-AKRFVG 393 (494)
T ss_dssp CTTCCEEEECSCHHHHHHHHHHHHHTTCC-EEEECC
T ss_pred CCCCeEEEEEccHHHHHHHHHHHHHcCCC-cEEEec
Confidence 45679999999877888999999999995 888988
No 137
>2v1x_A ATP-dependent DNA helicase Q1; DNA strand annealing, mismatch repair, nucleotide-binding, DNA-binding, polymorphism, nuclear protein, ATPase; HET: ADP; 2.00A {Homo sapiens} PDB: 2wwy_A*
Probab=30.07 E-value=49 Score=32.64 Aligned_cols=37 Identities=24% Similarity=0.135 Sum_probs=32.6
Q ss_pred CCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHH
Q 022409 179 KDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLE 216 (297)
Q Consensus 179 kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~ 216 (297)
++.++||||.+-..+..++..|...|+. +..+.||+.
T Consensus 266 ~~~~~IVf~~sr~~~e~la~~L~~~g~~-~~~~h~~l~ 302 (591)
T 2v1x_A 266 KGQSGIIYCFSQKDSEQVTVSLQNLGIH-AGAYHANLE 302 (591)
T ss_dssp TTCEEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred cCCCeEEEeCcHHHHHHHHHHHHHCCCC-EEEecCCCC
Confidence 5678999999888899999999999995 999999963
No 138
>2l17_A Synarsc, arsenate reductase; alpha/beta sandwich, oxidoreductase; NMR {Synechocystis} PDB: 2l18_A 2l19_A
Probab=30.05 E-value=47 Score=26.15 Aligned_cols=35 Identities=23% Similarity=0.332 Sum_probs=26.7
Q ss_pred eEEEEeCCCC-cHHHHHHHHHHcCCCCEEEccccHH
Q 022409 182 DLIVACQKGL-RSLAACELLYNAGYRNLFWVQGGLE 216 (297)
Q Consensus 182 ~IVvyC~~G~-RS~~aa~~L~~~Gy~nV~~L~GG~~ 216 (297)
+|+|.|.+.. ||..|..+|++..=+++.....|..
T Consensus 6 ~VLFVC~gN~cRSpmAEa~~~~~~~~~~~v~SAGt~ 41 (134)
T 2l17_A 6 KVMFVCKRNSCRSQMAEGFAKTLGAGKIAVTSCGLE 41 (134)
T ss_dssp EEEEECCSSTHHHHHHHHHHHHHSBTTEEEEEECCT
T ss_pred EEEEEeCCchHHHHHHHHHHHHHcCCCEEEEcccCC
Confidence 6999999666 9999999999875444666666654
No 139
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA processing, multifunctional enzyme, nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A
Probab=30.02 E-value=40 Score=29.38 Aligned_cols=39 Identities=18% Similarity=0.225 Sum_probs=22.9
Q ss_pred HHHHHHHHhcCC--CCCeEEEEeCCCC-cHHH--HHHHHHHcCC
Q 022409 167 KQFLSKVEEKLP--KDTDLIVACQKGL-RSLA--ACELLYNAGY 205 (297)
Q Consensus 167 ~~f~~~~~~~l~--kd~~IVvyC~~G~-RS~~--aa~~L~~~Gy 205 (297)
.+|++.+.+.+. ++.+|+|+|..|. |+.. ++.++...|+
T Consensus 126 ~~~~~~i~~~~~~~~~~~VlVHC~aG~gRTGt~ia~yLm~~~~~ 169 (241)
T 2c46_A 126 ETFIRLCERFNERNPPELIGVHCTHGFNRTGFLICAFLVEKMDW 169 (241)
T ss_dssp HHHHHHHTTC-----CEEEEEECSSSSHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHHhCC
Confidence 455555554343 2479999999886 7654 4444454676
No 140
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1
Probab=29.79 E-value=14 Score=30.03 Aligned_cols=27 Identities=22% Similarity=0.156 Sum_probs=21.8
Q ss_pred CcccccCcccCcccchhhhcccchhcCCC
Q 022409 231 LKFAGIGGLSEFLGYTSQLCYPFLHISYP 259 (297)
Q Consensus 231 ~~~~~~~G~t~~~gkT~~l~~l~~~~g~~ 259 (297)
....+++|.+ |.|||-+-+.|++. |++
T Consensus 8 ~~~I~i~G~~-GsGKST~~~~La~~-g~~ 34 (203)
T 1uf9_A 8 PIIIGITGNI-GSGKSTVAALLRSW-GYP 34 (203)
T ss_dssp CEEEEEEECT-TSCHHHHHHHHHHT-TCC
T ss_pred ceEEEEECCC-CCCHHHHHHHHHHC-CCE
Confidence 3567888888 59999999999554 986
No 141
>2d7d_A Uvrabc system protein B; helicase, protein-DNA-ADP ternary complex, hydrolase/DNA complex; HET: ADP; 2.10A {Bacillus subtilis} PDB: 2nmv_A* 2fdc_A* 1t5l_A 3uwx_B 1d9z_A* 1d9x_A 2d7d_B* 2nmv_B*
Probab=29.38 E-value=46 Score=33.36 Aligned_cols=48 Identities=8% Similarity=0.298 Sum_probs=38.2
Q ss_pred HHHHHHHHhcCCCCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccH
Q 022409 167 KQFLSKVEEKLPKDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGL 215 (297)
Q Consensus 167 ~~f~~~~~~~l~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~ 215 (297)
..++..+.....++.+++|+|.+-.++..++..|...|++ +..+.|++
T Consensus 432 ~~Ll~~l~~~~~~~~~vlVf~~t~~~ae~L~~~L~~~gi~-~~~lh~~~ 479 (661)
T 2d7d_A 432 DDLIGEIQARIERNERVLVTTLTKKMSEDLTDYLKEIGIK-VNYLHSEI 479 (661)
T ss_dssp HHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTC
T ss_pred HHHHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHhcCCC-eEEEeCCC
Confidence 4555666555556679999999888999999999999995 88888874
No 142
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=28.89 E-value=58 Score=25.46 Aligned_cols=37 Identities=14% Similarity=-0.050 Sum_probs=26.9
Q ss_pred CeEEEEeCCCC-cHHHHHHHHHHcCCCCEEEccccHHH
Q 022409 181 TDLIVACQKGL-RSLAACELLYNAGYRNLFWVQGGLEA 217 (297)
Q Consensus 181 ~~IVvyC~~G~-RS~~aa~~L~~~Gy~nV~~L~GG~~a 217 (297)
++|+|.|.+.. ||..|..+|++..=.++.....|...
T Consensus 4 ~~VLFVC~gN~cRSpmAEa~~~~~~~~~~~v~SAGt~~ 41 (131)
T 1jf8_A 4 KTIYFISTGNSARSQMAEGWGKEILGEGWNVYSAGIET 41 (131)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHSTTTEEEEEEESSC
T ss_pred CEEEEEcCCcchHHHHHHHHHHHhcCCCEEEEcCcCCC
Confidence 36999999665 99999999998642346566666543
No 143
>1qhx_A CPT, protein (chloramphenicol phosphotransferase); kinase, antibiotic resistance, phosphorylation, mononucleoti binding fold; HET: ATP; 2.50A {Streptomyces venezuelae} SCOP: c.37.1.3 PDB: 1grr_A* 1grq_A 1qhs_A* 1qhn_A* 1qhy_A*
Probab=28.77 E-value=14 Score=29.40 Aligned_cols=27 Identities=15% Similarity=0.068 Sum_probs=21.7
Q ss_pred cccccCcccCcccchhhhcccchhcCCC
Q 022409 232 KFAGIGGLSEFLGYTSQLCYPFLHISYP 259 (297)
Q Consensus 232 ~~~~~~G~t~~~gkT~~l~~l~~~~g~~ 259 (297)
++..+.|.+ |.|||-+-+.|+++.|.+
T Consensus 4 ~~i~l~G~~-GsGKST~a~~La~~l~~~ 30 (178)
T 1qhx_A 4 RMIILNGGS-SAGKSGIVRCLQSVLPEP 30 (178)
T ss_dssp CEEEEECCT-TSSHHHHHHHHHHHSSSC
T ss_pred eEEEEECCC-CCCHHHHHHHHHHhcCCC
Confidence 456789998 599999999996666664
No 144
>1ukz_A Uridylate kinase; transferase; HET: ADP AMP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1uky_A*
Probab=28.71 E-value=16 Score=29.87 Aligned_cols=30 Identities=13% Similarity=-0.070 Sum_probs=24.1
Q ss_pred CCCcccccCcccCcccchhhhcccchhcCCC
Q 022409 229 QPLKFAGIGGLSEFLGYTSQLCYPFLHISYP 259 (297)
Q Consensus 229 ~~~~~~~~~G~t~~~gkT~~l~~l~~~~g~~ 259 (297)
....+.++.|.. |+|||-+-+.|+++.|++
T Consensus 13 ~~~~~I~l~G~~-GsGKsT~~~~L~~~~g~~ 42 (203)
T 1ukz_A 13 DQVSVIFVLGGP-GAGKGTQCEKLVKDYSFV 42 (203)
T ss_dssp TTCEEEEEECST-TSSHHHHHHHHHHHSSCE
T ss_pred CCCcEEEEECCC-CCCHHHHHHHHHHHcCce
Confidence 345678888998 599999999996677874
No 145
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=28.45 E-value=97 Score=23.71 Aligned_cols=33 Identities=15% Similarity=0.060 Sum_probs=25.0
Q ss_pred CCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEcc
Q 022409 179 KDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQ 212 (297)
Q Consensus 179 kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~ 212 (297)
..--||+|.+...|-.......+..||. |..+.
T Consensus 76 aqvliiiydqdqnrleefsrevrrrgfe-vrtvt 108 (134)
T 2l69_A 76 AQVLIIIYDQDQNRLEEFSREVRRRGFE-VRTVT 108 (134)
T ss_dssp CCCEEEEECSCHHHHHHHHHHHHHTTCC-EEEES
T ss_pred CeEEEEEEeCchhHHHHHHHHHHhcCce-EEEec
Confidence 3346788888878888888888889985 76554
No 146
>1p15_A Protein-tyrosine phosphatase alpha; transmembrane, hydrolase, phosphorylation; 2.00A {Mus musculus} SCOP: c.45.1.2
Probab=28.17 E-value=57 Score=28.37 Aligned_cols=31 Identities=19% Similarity=0.462 Sum_probs=20.4
Q ss_pred HHHHHHHHhc--CCCCCeEEEEeCCCC-cHHHHH
Q 022409 167 KQFLSKVEEK--LPKDTDLIVACQKGL-RSLAAC 197 (297)
Q Consensus 167 ~~f~~~~~~~--l~kd~~IVvyC~~G~-RS~~aa 197 (297)
-+|++.+... ...+.||||+|..|. |+...+
T Consensus 161 l~~i~~v~~~~~~~~~~pivVHCsaGvGRTGtfi 194 (253)
T 1p15_A 161 INIIAAVQKQQQQSGNHPITVHCSAGAGRTGTFC 194 (253)
T ss_dssp HHHHHHHHHHTTTTTSCCEEEESSSSSHHHHHHH
T ss_pred HHHHHHHHHhhhccCCCCEEEEcCCCCchhHHHH
Confidence 4666666532 235679999999776 776543
No 147
>2yjt_D ATP-dependent RNA helicase SRMB, regulator of ribonuclease activity A; hydrolase inhibitor-hydrolase complex, DEAD box RNA helicase; 2.90A {Escherichia coli}
Probab=34.14 E-value=12 Score=30.08 Aligned_cols=38 Identities=24% Similarity=0.267 Sum_probs=32.1
Q ss_pred CCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHHH
Q 022409 179 KDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLEA 217 (297)
Q Consensus 179 kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~a 217 (297)
++.++||||+.-..+..++..|...|+. +..+.|++..
T Consensus 29 ~~~~~iVF~~~~~~~~~l~~~L~~~~~~-~~~~~g~~~~ 66 (170)
T 2yjt_D 29 EATRSIVFVRKRERVHELANWLREAGIN-NCYLEGEMVQ 66 (170)
Confidence 3458999999888899999999999995 8888888654
No 148
>1e6c_A Shikimate kinase; phosphoryl transfer, ADP, shikimate pathway, P-loop protein, transferase; 1.8A {Erwinia chrysanthemi} SCOP: c.37.1.2 PDB: 1shk_A 2shk_A*
Probab=28.03 E-value=11 Score=29.79 Aligned_cols=27 Identities=15% Similarity=-0.101 Sum_probs=21.6
Q ss_pred cccccCcccCcccchhhhcccchhcCCC
Q 022409 232 KFAGIGGLSEFLGYTSQLCYPFLHISYP 259 (297)
Q Consensus 232 ~~~~~~G~t~~~gkT~~l~~l~~~~g~~ 259 (297)
+..++.|.. |+|||-+-+.|+++.|++
T Consensus 3 ~~I~l~G~~-GsGKsT~a~~La~~lg~~ 29 (173)
T 1e6c_A 3 EPIFMVGAR-GCGMTTVGRELARALGYE 29 (173)
T ss_dssp CCEEEESCT-TSSHHHHHHHHHHHHTCE
T ss_pred ceEEEECCC-CCCHHHHHHHHHHHhCCc
Confidence 356788888 599999999995556985
No 149
>3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A
Probab=27.96 E-value=13 Score=28.95 Aligned_cols=25 Identities=12% Similarity=-0.116 Sum_probs=21.5
Q ss_pred ccccCcccCcccchhhhcccchhcCCC
Q 022409 233 FAGIGGLSEFLGYTSQLCYPFLHISYP 259 (297)
Q Consensus 233 ~~~~~G~t~~~gkT~~l~~l~~~~g~~ 259 (297)
+.++.|.+ |+|||-+.+.| ++.|++
T Consensus 3 ~I~l~G~~-GsGKsT~a~~L-~~~g~~ 27 (179)
T 3lw7_A 3 VILITGMP-GSGKSEFAKLL-KERGAK 27 (179)
T ss_dssp EEEEECCT-TSCHHHHHHHH-HHTTCE
T ss_pred EEEEECCC-CCCHHHHHHHH-HHCCCc
Confidence 56788888 59999999999 888996
No 150
>1c4o_A DNA nucleotide excision repair enzyme UVRB; uvrabc, helicase, hypertherm protein, replication; HET: DNA BOG; 1.50A {Thermus thermophilus} SCOP: c.37.1.19 c.37.1.19 PDB: 1d2m_A*
Probab=27.49 E-value=38 Score=34.03 Aligned_cols=48 Identities=13% Similarity=0.194 Sum_probs=37.7
Q ss_pred HHHHHHHHhcCCCCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccH
Q 022409 167 KQFLSKVEEKLPKDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGL 215 (297)
Q Consensus 167 ~~f~~~~~~~l~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~ 215 (297)
..++..+.....++.+++|+|.+-.++..++..|.+.|++ +..+.|++
T Consensus 426 ~~Ll~~l~~~~~~~~~vlVf~~t~~~ae~L~~~L~~~gi~-~~~lh~~~ 473 (664)
T 1c4o_A 426 LDLMEGIRERAARGERTLVTVLTVRMAEELTSFLVEHGIR-ARYLHHEL 473 (664)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTC
T ss_pred HHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCC-ceeecCCC
Confidence 4555555544445679999999888999999999999995 88888874
No 151
>1k92_A Argininosuccinate synthase, argininosuccinate SY; N-type ATP pyrophosphatase, ligase; 1.60A {Escherichia coli} SCOP: c.26.2.1 d.210.1.1 PDB: 1k97_A* 1kp2_A* 1kp3_A*
Probab=27.47 E-value=46 Score=32.23 Aligned_cols=33 Identities=24% Similarity=0.288 Sum_probs=28.1
Q ss_pred cCCCCCeEEEEeCCCCcHHHHHHHHHHcCCCCEE
Q 022409 176 KLPKDTDLIVACQKGLRSLAACELLYNAGYRNLF 209 (297)
Q Consensus 176 ~l~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~ 209 (297)
.++++++|+|.+.||..|..++.+|.+.||+ |.
T Consensus 6 ~l~~~~KVvVA~SGGlDSSvll~~L~e~G~e-Vi 38 (455)
T 1k92_A 6 HLPVGQRIGIAFSGGLDTSAALLWMRQKGAV-PY 38 (455)
T ss_dssp SCCTTSEEEEECCSSHHHHHHHHHHHHTTCE-EE
T ss_pred hhcCCCeEEEEEcChHHHHHHHHHHHHcCCE-EE
Confidence 4566778999999999999999999999995 65
No 152
>3m4u_A Tyrosine specific protein phosphatase, putative; protein tyrosine phosphatase, hydrolase; 2.39A {Trypanosoma brucei}
Probab=27.03 E-value=58 Score=29.21 Aligned_cols=29 Identities=21% Similarity=0.461 Sum_probs=19.2
Q ss_pred HHHHHHHhcCCCCCeEEEEeCCCC-cHHHHH
Q 022409 168 QFLSKVEEKLPKDTDLIVACQKGL-RSLAAC 197 (297)
Q Consensus 168 ~f~~~~~~~l~kd~~IVvyC~~G~-RS~~aa 197 (297)
+|++.+.. ...+.||||+|..|. |+...+
T Consensus 211 ~~~~~v~~-~~~~~PivVHCsaGvGRTGtfi 240 (306)
T 3m4u_A 211 ELLSVIKN-CVTTSPILVHCSAGIGRTGTLI 240 (306)
T ss_dssp HHHHHHHT-CCCSSCEEEECSSSSHHHHHHH
T ss_pred HHHHHHHh-hCCCCCEEEEcCCCCcchheee
Confidence 45555553 344679999999776 776544
No 153
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=26.89 E-value=54 Score=24.46 Aligned_cols=84 Identities=14% Similarity=0.071 Sum_probs=44.0
Q ss_pred HHHHHHHhcCCCCCeEEEEeCC-----CC-cHHHHHHHHHHcCCCC-EEEcccc--HHHHHhCCCCccCCCCCcccccCc
Q 022409 168 QFLSKVEEKLPKDTDLIVACQK-----GL-RSLAACELLYNAGYRN-LFWVQGG--LEAAEEEDLVREGPQPLKFAGIGG 238 (297)
Q Consensus 168 ~f~~~~~~~l~kd~~IVvyC~~-----G~-RS~~aa~~L~~~Gy~n-V~~L~GG--~~aw~~~~lp~~~~~~~~~~~~~G 238 (297)
+..+.+.+.+ +..+|+||..+ +- .|..+-.+|.+.|.+- .+.+... ...+..+ ..+...+....++|
T Consensus 6 ~~~~~v~~~i-~~~~Vvvy~k~t~~~p~Cp~C~~ak~~L~~~gi~~~~~dI~~~~~~~~~l~~---~~g~~tvP~ifi~g 81 (109)
T 3ipz_A 6 QLKDTLEKLV-NSEKVVLFMKGTRDFPMCGFSNTVVQILKNLNVPFEDVNILENEMLRQGLKE---YSNWPTFPQLYIGG 81 (109)
T ss_dssp HHHHHHHHHH-TSSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCEEEEGGGCHHHHHHHHH---HHTCSSSCEEEETT
T ss_pred HHHHHHHHHH-ccCCEEEEEecCCCCCCChhHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHH---HHCCCCCCeEEECC
Confidence 3334444333 45589999875 44 7889999999999752 2344433 2222211 11112233345556
Q ss_pred ccCcccchhhhcccchhcCC
Q 022409 239 LSEFLGYTSQLCYPFLHISY 258 (297)
Q Consensus 239 ~t~~~gkT~~l~~l~~~~g~ 258 (297)
. .+|=-|.+.++ .+.|-
T Consensus 82 ~--~iGG~d~l~~l-~~~G~ 98 (109)
T 3ipz_A 82 E--FFGGCDITLEA-FKTGE 98 (109)
T ss_dssp E--EEECHHHHHHH-HHHSH
T ss_pred E--EEeCHHHHHHH-HHcCc
Confidence 5 34545555555 45554
No 154
>3i32_A Heat resistant RNA dependent ATPase; RNA helicase, dimer, RNA recognition motif, ATP-BIND helicase, nucleotide-binding; 2.80A {Thermus thermophilus}
Probab=26.78 E-value=40 Score=30.35 Aligned_cols=35 Identities=11% Similarity=0.078 Sum_probs=30.7
Q ss_pred CCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccH
Q 022409 180 DTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGL 215 (297)
Q Consensus 180 d~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~ 215 (297)
..+++|||++-..+..++..|...|+. +..+.|++
T Consensus 28 ~~~~LVF~~t~~~~~~l~~~L~~~g~~-~~~lhg~l 62 (300)
T 3i32_A 28 PDRAMVFTRTKAETEEIAQGLLRLGHP-AQALHGDM 62 (300)
T ss_dssp CSSEEEECSSHHHHHHHHHHHHTTTCC-EEEECSCC
T ss_pred CCCEEEEECCHHHHHHHHHHHHhCCCC-EEEEeCCC
Confidence 569999999877889999999999995 88899983
No 155
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=26.75 E-value=43 Score=25.65 Aligned_cols=26 Identities=23% Similarity=0.301 Sum_probs=18.4
Q ss_pred CeEEEEeCCCCcHHH-HHHH----HHHcCCC
Q 022409 181 TDLIVACQKGLRSLA-ACEL----LYNAGYR 206 (297)
Q Consensus 181 ~~IVvyC~~G~RS~~-aa~~----L~~~Gy~ 206 (297)
++|++.|.+|+-+.. ++.. +.+.|++
T Consensus 22 kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~ 52 (113)
T 1tvm_A 22 RKIIVACGGAVATSTMAAEEIKELCQSHNIP 52 (113)
T ss_dssp EEEEEESCSCSSHHHHHHHHHHHHHHHTTCC
T ss_pred cEEEEECCCCHHHHHHHHHHHHHHHHHcCCe
Confidence 479999999996544 4544 4557885
No 156
>1oyw_A RECQ helicase, ATP-dependent DNA helicase; winged helix, helix-turn-helix, ATP binding, Zn(2+) binding, hydrolase; 1.80A {Escherichia coli} SCOP: a.4.5.43 c.37.1.19 c.37.1.19 PDB: 1oyy_A*
Probab=26.67 E-value=55 Score=31.57 Aligned_cols=37 Identities=19% Similarity=0.251 Sum_probs=32.3
Q ss_pred CCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHH
Q 022409 179 KDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLE 216 (297)
Q Consensus 179 kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~ 216 (297)
++.++||||.+-..+..++..|...|+. +..+.||+.
T Consensus 235 ~~~~~IVf~~sr~~~e~l~~~L~~~g~~-~~~~h~~l~ 271 (523)
T 1oyw_A 235 RGKSGIIYCNSRAKVEDTAARLQSKGIS-AAAYHAGLE 271 (523)
T ss_dssp TTCCEEEECSSHHHHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred CCCcEEEEeCCHHHHHHHHHHHHHCCCC-EEEecCCCC
Confidence 4568999999888899999999999995 999999864
No 157
>1vkr_A Mannitol-specific PTS system enzyme iiabc compone; phosphotransferase, transferase, kinase, sugar transport; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1vrv_A* 2few_B*
Probab=26.61 E-value=43 Score=26.28 Aligned_cols=26 Identities=35% Similarity=0.540 Sum_probs=18.5
Q ss_pred CCeEEEEeCCCCcHHHH-HH----HHHHcCC
Q 022409 180 DTDLIVACQKGLRSLAA-CE----LLYNAGY 205 (297)
Q Consensus 180 d~~IVvyC~~G~RS~~a-a~----~L~~~Gy 205 (297)
-.+|++.|..|+-+..+ +. .+.+.|+
T Consensus 13 ~kkIlvVC~sGmgTS~ml~~klkk~~~e~gi 43 (125)
T 1vkr_A 13 VRKIIVACDAGMGSSAMGAGVLRKKIQDAGL 43 (125)
T ss_dssp CCEEEECCSSSSHHHHHHHHHHHHHHHHTTC
T ss_pred ccEEEEECCCcHHHHHHHHHHHHHHHHHCCC
Confidence 35799999999965555 43 4555787
No 158
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=26.17 E-value=44 Score=25.34 Aligned_cols=30 Identities=3% Similarity=-0.027 Sum_probs=20.6
Q ss_pred CeEEEEeCCCCcHHHHHHH----HHHcCCCCEEEc
Q 022409 181 TDLIVACQKGLRSLAACEL----LYNAGYRNLFWV 211 (297)
Q Consensus 181 ~~IVvyC~~G~RS~~aa~~----L~~~Gy~nV~~L 211 (297)
++|++.|.+|+-+..++.- +++.|++ +-.-
T Consensus 4 kkIll~Cg~G~sTS~l~~k~~~~~~~~gi~-~~i~ 37 (106)
T 1e2b_A 4 KHIYLFSSAGMSTSLLVSKMRAQAEKYEVP-VIIE 37 (106)
T ss_dssp EEEEEECSSSTTTHHHHHHHHHHHHHSCCS-EEEE
T ss_pred cEEEEECCCchhHHHHHHHHHHHHHHCCCC-eEEE
Confidence 4799999999965555544 5567885 5433
No 159
>2der_A TRNA-specific 2-thiouridylase MNMA; protein-RNA complex, transferase/RNA complex; 3.10A {Escherichia coli} PDB: 2det_A 2deu_A*
Probab=26.15 E-value=47 Score=31.10 Aligned_cols=30 Identities=27% Similarity=0.385 Sum_probs=25.1
Q ss_pred CCCeEEEEeCCCCcHHHHHHHHHHcCCCCEE
Q 022409 179 KDTDLIVACQKGLRSLAACELLYNAGYRNLF 209 (297)
Q Consensus 179 kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~ 209 (297)
++.+|+|...||..|..++.+|.+.||+ |.
T Consensus 16 ~~~kVvVa~SGGvDSsv~a~lL~~~G~~-V~ 45 (380)
T 2der_A 16 TAKKVIVGMSGGVDSSVSAWLLQQQGYQ-VE 45 (380)
T ss_dssp -CCEEEEECCSCSTTHHHHHHHHTTCCE-EE
T ss_pred CCCEEEEEEEChHHHHHHHHHHHHcCCe-EE
Confidence 4568888888999999999999999985 64
No 160
>3ohg_A Uncharacterized protein from DUF2233 family; structural genomics, unknown function, joint center for STRU genomics, JCSG; HET: MSE; 1.80A {Bacteroides ovatus}
Probab=26.08 E-value=79 Score=28.53 Aligned_cols=26 Identities=23% Similarity=0.303 Sum_probs=23.1
Q ss_pred CCcHHHHHHHHHHcCCCCEEEccccH
Q 022409 190 GLRSLAACELLYNAGYRNLFWVQGGL 215 (297)
Q Consensus 190 G~RS~~aa~~L~~~Gy~nV~~L~GG~ 215 (297)
|+.-..++.+|+++|..+...|+||-
T Consensus 218 G~tl~ela~~~~~lG~~~AlnLDGGg 243 (285)
T 3ohg_A 218 GLTLPHLATMMKAVGCYNAINLDGGG 243 (285)
T ss_dssp CBCHHHHHHHHHHHTCSEEEECCCGG
T ss_pred CCCHHHHHHHHHHcCCCeEEECCCCc
Confidence 46678899999999999999999984
No 161
>1p8a_A Protein tyrosine phosphatase; hydrolase; NMR {Tritrichomonas foetus} SCOP: c.44.1.1
Probab=25.95 E-value=11 Score=30.44 Aligned_cols=38 Identities=13% Similarity=0.117 Sum_probs=26.8
Q ss_pred CeEEEEeCCCC-cHHHHHHHHHHcCCCCEEEccccHHHH
Q 022409 181 TDLIVACQKGL-RSLAACELLYNAGYRNLFWVQGGLEAA 218 (297)
Q Consensus 181 ~~IVvyC~~G~-RS~~aa~~L~~~Gy~nV~~L~GG~~aw 218 (297)
.+|+|.|.+.. ||..|..+|++..=+.+.....|...|
T Consensus 5 ~~VLFVC~gN~cRSpmAEal~~~~~~~~~~v~SAGt~~~ 43 (146)
T 1p8a_A 5 KAVLFVCLGNICRSPACEGICRDMVGDKLIIDSAATSGF 43 (146)
T ss_dssp CCEEEESSSSCSSSTTHHHHHHHHHSSCSSCEEECSCTT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHhcCCCEEEEeeecCCc
Confidence 47999998655 999999999886433344455566655
No 162
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=25.85 E-value=49 Score=25.06 Aligned_cols=38 Identities=18% Similarity=0.261 Sum_probs=22.8
Q ss_pred CeEEEEeCCCCcHHH-HH----HHHHHcCCCCEEEccccHHHH
Q 022409 181 TDLIVACQKGLRSLA-AC----ELLYNAGYRNLFWVQGGLEAA 218 (297)
Q Consensus 181 ~~IVvyC~~G~RS~~-aa----~~L~~~Gy~nV~~L~GG~~aw 218 (297)
++|++.|.+|+-+.. ++ ..+.+.|++++..-.-++...
T Consensus 19 ~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~~~~i~~~~~~~~ 61 (110)
T 3czc_A 19 VKVLTACGNGMGSSMVIKMKVENALRQLGVSDIESASCSVGEA 61 (110)
T ss_dssp EEEEEECCCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECHHHH
T ss_pred cEEEEECCCcHHHHHHHHHHHHHHHHHcCCCeEEEEEeeHHHH
Confidence 479999999985444 44 356667885233333344444
No 163
>2vli_A Antibiotic resistance protein; transferase, tunicamycin, phosphotransferase; 1.95A {Deinococcus radiodurans}
Probab=25.81 E-value=16 Score=29.09 Aligned_cols=27 Identities=15% Similarity=-0.053 Sum_probs=18.9
Q ss_pred cccccCcccCcccchhhhcccchhcCCC
Q 022409 232 KFAGIGGLSEFLGYTSQLCYPFLHISYP 259 (297)
Q Consensus 232 ~~~~~~G~t~~~gkT~~l~~l~~~~g~~ 259 (297)
.+.++.|.. |+|||-+-+.|+++.|++
T Consensus 6 ~~I~l~G~~-GsGKST~a~~La~~l~~~ 32 (183)
T 2vli_A 6 PIIWINGPF-GVGKTHTAHTLHERLPGS 32 (183)
T ss_dssp CEEEEECCC-----CHHHHHHHHHSTTC
T ss_pred eEEEEECCC-CCCHHHHHHHHHHhcCCC
Confidence 567888998 599999999996666885
No 164
>1xti_A Probable ATP-dependent RNA helicase P47; alpha-beta fold, gene regulation; 1.95A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 1xtj_A* 1xtk_A
Probab=25.79 E-value=45 Score=29.69 Aligned_cols=37 Identities=14% Similarity=0.291 Sum_probs=31.8
Q ss_pred CCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHH
Q 022409 179 KDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLE 216 (297)
Q Consensus 179 kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~ 216 (297)
+..+++|||.+-..+..++..|...|+. +..+.|++.
T Consensus 249 ~~~~~lvf~~~~~~~~~l~~~L~~~~~~-~~~~~~~~~ 285 (391)
T 1xti_A 249 EFNQVVIFVKSVQRCIALAQLLVEQNFP-AIAIHRGMP 285 (391)
T ss_dssp CCSEEEEECSCHHHHHHHHHHHHHTTCC-EEEECTTSC
T ss_pred CCCcEEEEeCcHHHHHHHHHHHHhCCCc-EEEEeCCCC
Confidence 4568999999888899999999999995 888888853
No 165
>3mmj_A MYO-inositol hexaphosphate phosphohydrolase; phytase, protein tyrosine phosphatase, inositol phosphate, I phosphatase; HET: IHP; 1.60A {Selenomonas ruminantium} SCOP: c.45.1.4 PDB: 1u24_A 1u25_A* 1u26_A* 3o3l_A* 3moz_A* 2pt0_A 2psz_A 3d1h_A 3d1o_A 3d1q_A 2b4u_A 2b4p_A 2b4o_A
Probab=25.74 E-value=61 Score=29.79 Aligned_cols=28 Identities=32% Similarity=0.463 Sum_probs=19.5
Q ss_pred HHHHHHHhcCCCCCeEEEEeCCCC-cHHHH
Q 022409 168 QFLSKVEEKLPKDTDLIVACQKGL-RSLAA 196 (297)
Q Consensus 168 ~f~~~~~~~l~kd~~IVvyC~~G~-RS~~a 196 (297)
.|++.+. .++++.+|+|+|..|. |+..+
T Consensus 202 ~fl~~v~-~l~~~~~i~vHC~aG~GRTgt~ 230 (314)
T 3mmj_A 202 RFLAFYR-TLPQDAWLHFHSEAGVGRTTAF 230 (314)
T ss_dssp HHHHHHH-TCCTTCEEEEECSSSSHHHHHH
T ss_pred HHHHHHH-HcCCCCCEEEECCCCCchHHHH
Confidence 3444444 4677889999999887 76544
No 166
>1fpr_A Protein-tyrosine phosphatase 1C; protein tyrosine phosphatase, substrate specificity, residue shift, signaling protein; HET: PTR; 2.50A {Homo sapiens} SCOP: c.45.1.2 PDB: 1gwz_A
Probab=25.72 E-value=59 Score=28.78 Aligned_cols=31 Identities=26% Similarity=0.500 Sum_probs=20.5
Q ss_pred HHHHHHHh---cCCCCCeEEEEeCCCC-cHHHHHH
Q 022409 168 QFLSKVEE---KLPKDTDLIVACQKGL-RSLAACE 198 (297)
Q Consensus 168 ~f~~~~~~---~l~kd~~IVvyC~~G~-RS~~aa~ 198 (297)
+|++.+.. .++.+.||||+|..|. |+...+.
T Consensus 189 ~~~~~v~~~~~~~~~~~pivVHCsaGvGRTGtfia 223 (284)
T 1fpr_A 189 SFLDQINQRQESLPHAGPIIVHSSAGIGRTGTIIV 223 (284)
T ss_dssp HHHHHHHHHHTTSTTCCCEEEESSBSSHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCcEEEEcCCCCcHHHHHHH
Confidence 56665543 2446689999999666 7765443
No 167
>2pt5_A Shikimate kinase, SK; aromatic amino acid biosynthesis, P-loop kinase, SHI kinase, shikimate pathway; 2.10A {Aquifex aeolicus}
Probab=25.54 E-value=16 Score=28.77 Aligned_cols=25 Identities=12% Similarity=0.037 Sum_probs=20.4
Q ss_pred cccCcccCcccchhhhcccchhcCCC
Q 022409 234 AGIGGLSEFLGYTSQLCYPFLHISYP 259 (297)
Q Consensus 234 ~~~~G~t~~~gkT~~l~~l~~~~g~~ 259 (297)
.++.|.. |.|||-+-+.|+++.|++
T Consensus 3 I~l~G~~-GsGKsT~a~~L~~~l~~~ 27 (168)
T 2pt5_A 3 IYLIGFM-CSGKSTVGSLLSRSLNIP 27 (168)
T ss_dssp EEEESCT-TSCHHHHHHHHHHHHTCC
T ss_pred EEEECCC-CCCHHHHHHHHHHHhCCC
Confidence 5677887 599999999995556986
No 168
>3pey_A ATP-dependent RNA helicase DBP5; RECA, DEAD-BOX, ATPase, helicase, mRNA-export, nuclear pore, hydrolase-RNA complex; HET: ADP; 1.40A {Saccharomyces cerevisiae} PDB: 3pew_A* 3pex_A* 3pez_A* 3rrm_A* 3rrn_A* 2kbe_A 3gfp_A 2kbf_A 3pev_A* 3peu_A*
Probab=25.50 E-value=66 Score=28.44 Aligned_cols=37 Identities=14% Similarity=0.081 Sum_probs=31.9
Q ss_pred CCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHH
Q 022409 179 KDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLE 216 (297)
Q Consensus 179 kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~ 216 (297)
++.+++|||++-..+..++..|+..|++ +..+.|++.
T Consensus 242 ~~~~~lvf~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~ 278 (395)
T 3pey_A 242 TIGSSIIFVATKKTANVLYGKLKSEGHE-VSILHGDLQ 278 (395)
T ss_dssp TSSEEEEECSCHHHHHHHHHHHHHTTCC-CEEECTTSC
T ss_pred cCCCEEEEeCCHHHHHHHHHHHHhcCCc-EEEeCCCCC
Confidence 4568999999878899999999999995 989999853
No 169
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=25.42 E-value=41 Score=25.95 Aligned_cols=28 Identities=21% Similarity=0.164 Sum_probs=22.2
Q ss_pred CCCeEEEEeCC-----CC-cHHHHHHHHHHcCCC
Q 022409 179 KDTDLIVACQK-----GL-RSLAACELLYNAGYR 206 (297)
Q Consensus 179 kd~~IVvyC~~-----G~-RS~~aa~~L~~~Gy~ 206 (297)
+..+|+||..+ +- .|..+-.+|...|++
T Consensus 14 ~~~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~ 47 (121)
T 3gx8_A 14 ESAPVVLFMKGTPEFPKCGFSRATIGLLGNQGVD 47 (121)
T ss_dssp HSCSEEEEESBCSSSBCTTHHHHHHHHHHHHTBC
T ss_pred ccCCEEEEEeccCCCCCCccHHHHHHHHHHcCCC
Confidence 34589999875 43 789999999999974
No 170
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=25.16 E-value=53 Score=24.81 Aligned_cols=76 Identities=9% Similarity=-0.065 Sum_probs=39.7
Q ss_pred CCCeEEEEeC-----CCC-cHHHHHHHHHHcCCCC-EEEccccHHHHHhCCCCccCCCCCcccccCcccCcccchhhhcc
Q 022409 179 KDTDLIVACQ-----KGL-RSLAACELLYNAGYRN-LFWVQGGLEAAEEEDLVREGPQPLKFAGIGGLSEFLGYTSQLCY 251 (297)
Q Consensus 179 kd~~IVvyC~-----~G~-RS~~aa~~L~~~Gy~n-V~~L~GG~~aw~~~~lp~~~~~~~~~~~~~G~t~~~gkT~~l~~ 251 (297)
+..+|++|-. .+. .|..|-.+|...|.+= .+.+... ..++++-....+...+....++|. .+|=-|.+.+
T Consensus 14 ~~~~Vvlf~kg~~~~~~Cp~C~~ak~~L~~~gi~y~~~di~~d-~~~~~~l~~~~g~~tvP~ifi~g~--~iGG~d~l~~ 90 (111)
T 3zyw_A 14 HAAPCMLFMKGTPQEPRCGFSKQMVEILHKHNIQFSSFDIFSD-EEVRQGLKAYSSWPTYPQLYVSGE--LIGGLDIIKE 90 (111)
T ss_dssp TSSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCEEEEGGGC-HHHHHHHHHHHTCCSSCEEEETTE--EEECHHHHHH
T ss_pred hcCCEEEEEecCCCCCcchhHHHHHHHHHHcCCCeEEEECcCC-HHHHHHHHHHHCCCCCCEEEECCE--EEecHHHHHH
Confidence 4568999987 444 6888999999999742 2344433 222221101111122333445555 3444455555
Q ss_pred cchhcCC
Q 022409 252 PFLHISY 258 (297)
Q Consensus 252 l~~~~g~ 258 (297)
+ .+.|-
T Consensus 91 l-~~~G~ 96 (111)
T 3zyw_A 91 L-EASEE 96 (111)
T ss_dssp H-HHTTC
T ss_pred H-HHCCC
Confidence 5 34553
No 171
>3iij_A Coilin-interacting nuclear ATPase protein; alpha and beta proteins (A/B), protein binding, transferase, phosphotransferase; HET: ADP; 1.76A {Homo sapiens} SCOP: c.37.1.1 PDB: 3iik_A 3iil_A* 3iim_A* 1rkb_A
Probab=25.14 E-value=14 Score=29.72 Aligned_cols=28 Identities=14% Similarity=-0.140 Sum_probs=22.5
Q ss_pred CcccccCcccCcccchhhhcccchhcCCC
Q 022409 231 LKFAGIGGLSEFLGYTSQLCYPFLHISYP 259 (297)
Q Consensus 231 ~~~~~~~G~t~~~gkT~~l~~l~~~~g~~ 259 (297)
.+...+.|.+ |+|||-+.+.|+++.|++
T Consensus 11 ~~~i~i~G~~-GsGKst~~~~l~~~~~~~ 38 (180)
T 3iij_A 11 LPNILLTGTP-GVGKTTLGKELASKSGLK 38 (180)
T ss_dssp CCCEEEECST-TSSHHHHHHHHHHHHCCE
T ss_pred CCeEEEEeCC-CCCHHHHHHHHHHHhCCe
Confidence 3567788998 599999999996666884
No 172
>4grz_A Tyrosine-protein phosphatase non-receptor type 6; phosphatase domain, hydrolase; 1.37A {Homo sapiens} PDB: 4gry_A 4gs0_A* 1gwz_A 1fpr_A*
Probab=25.06 E-value=65 Score=28.51 Aligned_cols=30 Identities=27% Similarity=0.537 Sum_probs=19.8
Q ss_pred HHHHHHHh---cCCCCCeEEEEeCCCC-cHHHHH
Q 022409 168 QFLSKVEE---KLPKDTDLIVACQKGL-RSLAAC 197 (297)
Q Consensus 168 ~f~~~~~~---~l~kd~~IVvyC~~G~-RS~~aa 197 (297)
+|++.+.. ..+.+.||||+|..|. |+...+
T Consensus 191 ~~~~~v~~~~~~~~~~~PivVHCsaGvGRTGtfi 224 (288)
T 4grz_A 191 SFLDQINQRQESLPHAGPIIVHSSAGIGRTGTII 224 (288)
T ss_dssp HHHHHHHHHHHHSTTCCCEEEECSSSSHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCcEEEEeCCCCcHHHHHH
Confidence 55555542 3456789999999766 776543
No 173
>1s2m_A Putative ATP-dependent RNA helicase DHH1; ATP-binding, RNA-binding, RNA binding protein; 2.10A {Saccharomyces cerevisiae} SCOP: c.37.1.19 c.37.1.19 PDB: 2wax_A* 2way_A
Probab=24.57 E-value=45 Score=29.93 Aligned_cols=37 Identities=14% Similarity=0.330 Sum_probs=31.8
Q ss_pred CCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHH
Q 022409 179 KDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLE 216 (297)
Q Consensus 179 kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~ 216 (297)
+..+++|||++-..+..++..|...|+. +..+.|++.
T Consensus 257 ~~~~~lVf~~~~~~~~~l~~~L~~~~~~-~~~~~~~~~ 293 (400)
T 1s2m_A 257 QINQAIIFCNSTNRVELLAKKITDLGYS-CYYSHARMK 293 (400)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHHTCC-EEEECTTSC
T ss_pred CCCcEEEEEecHHHHHHHHHHHHhcCCC-eEEecCCCC
Confidence 4468999999888899999999999995 888988863
No 174
>1wch_A Protein tyrosine phosphatase, non-receptor type 13; hydrolase, phosphate ION, colorectal cancer alternative splicing, coiled coil, cytoskeleton; 1.85A {Homo sapiens} SCOP: c.45.1.2
Probab=24.51 E-value=50 Score=29.95 Aligned_cols=29 Identities=24% Similarity=0.494 Sum_probs=19.3
Q ss_pred HHHHHHHhcCCCCCeEEEEeCCCC-cHHHHH
Q 022409 168 QFLSKVEEKLPKDTDLIVACQKGL-RSLAAC 197 (297)
Q Consensus 168 ~f~~~~~~~l~kd~~IVvyC~~G~-RS~~aa 197 (297)
+|++.+.. .....||||+|..|. |+...+
T Consensus 228 ~~i~~v~~-~~~~~PivVHCsaGvGRTGtfi 257 (315)
T 1wch_A 228 TFISYMRH-IHRSGPIITHCSAGIGRSGTLI 257 (315)
T ss_dssp HHHHHHHH-HCCSSCEEEECSSSSHHHHHHH
T ss_pred HHHHHHHh-hCCCCCEEEEcCCCCcHHHHHH
Confidence 45555553 335679999999776 776543
No 175
>1kag_A SKI, shikimate kinase I; transferase, structural genomics, PSI, protein structure initiative; 2.05A {Escherichia coli} SCOP: c.37.1.2
Probab=24.24 E-value=16 Score=28.87 Aligned_cols=27 Identities=7% Similarity=-0.183 Sum_probs=21.7
Q ss_pred cccccCcccCcccchhhhcccchhcCCC
Q 022409 232 KFAGIGGLSEFLGYTSQLCYPFLHISYP 259 (297)
Q Consensus 232 ~~~~~~G~t~~~gkT~~l~~l~~~~g~~ 259 (297)
...++.|.+ |.|||-+.+.|+...|++
T Consensus 5 ~~i~l~G~~-GsGKSTl~~~La~~l~~~ 31 (173)
T 1kag_A 5 RNIFLVGPM-GAGKSTIGRQLAQQLNME 31 (173)
T ss_dssp CCEEEECCT-TSCHHHHHHHHHHHTTCE
T ss_pred CeEEEECCC-CCCHHHHHHHHHHHhCCC
Confidence 356788888 599999999996666874
No 176
>1to0_A Hypothetical UPF0247 protein YYDA; structural genomics, unknown function, PSI, protein structure initiative; 2.50A {Bacillus subtilis} SCOP: c.116.1.3
Probab=24.22 E-value=75 Score=26.43 Aligned_cols=42 Identities=21% Similarity=0.339 Sum_probs=30.0
Q ss_pred HHhcCCCCCeEEEEeCCCC--cHHHHHHHHHH---cCCCCEEEcccc
Q 022409 173 VEEKLPKDTDLIVACQKGL--RSLAACELLYN---AGYRNLFWVQGG 214 (297)
Q Consensus 173 ~~~~l~kd~~IVvyC~~G~--RS~~aa~~L~~---~Gy~nV~~L~GG 214 (297)
+.+.++++.-+|+.|..|. .|...|..|.+ .|..++..+-||
T Consensus 63 il~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~G~~~i~FvIGG 109 (167)
T 1to0_A 63 ILSKISPDAHVIALAIEGKMKTSEELADTIDKLATYGKSKVTFVIGG 109 (167)
T ss_dssp HHTTSCTTSEEEEEEEEEEECCHHHHHHHHHHHHTTTCCEEEEEECC
T ss_pred HHhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCceEEEEEEC
Confidence 3445655544787887664 79999999887 576678777777
No 177
>1y63_A LMAJ004144AAA protein; structural genomics, protein structure initiative, PSI, SGPP structural genomics of pathogenic protozoa consortium; HET: ADP; 1.70A {Leishmania major} SCOP: c.37.1.1
Probab=24.16 E-value=16 Score=29.68 Aligned_cols=28 Identities=18% Similarity=-0.153 Sum_probs=22.1
Q ss_pred CcccccCcccCcccchhhhcccchh-cCCC
Q 022409 231 LKFAGIGGLSEFLGYTSQLCYPFLH-ISYP 259 (297)
Q Consensus 231 ~~~~~~~G~t~~~gkT~~l~~l~~~-~g~~ 259 (297)
.+..+++|.. |+|||-+.+.|+++ .|++
T Consensus 10 ~~~I~l~G~~-GsGKSTv~~~La~~l~g~~ 38 (184)
T 1y63_A 10 GINILITGTP-GTGKTSMAEMIAAELDGFQ 38 (184)
T ss_dssp SCEEEEECST-TSSHHHHHHHHHHHSTTEE
T ss_pred CCEEEEECCC-CCCHHHHHHHHHHhcCCCE
Confidence 3567888888 59999999999555 4885
No 178
>2ooq_A Receptor-type tyrosine-protein phosphatase T; protein tyrosine phosphatase, human, structural GE structural genomics consortium, SGC, hydrolase; HET: B3P; 1.80A {Homo sapiens} PDB: 1rpm_A 2c7s_A
Probab=23.91 E-value=70 Score=28.45 Aligned_cols=31 Identities=23% Similarity=0.360 Sum_probs=20.2
Q ss_pred HHHHHHHHhcC-CCCCeEEEEeCCCC-cHHHHH
Q 022409 167 KQFLSKVEEKL-PKDTDLIVACQKGL-RSLAAC 197 (297)
Q Consensus 167 ~~f~~~~~~~l-~kd~~IVvyC~~G~-RS~~aa 197 (297)
-+|++.+.... +.+.||||+|..|. |+...+
T Consensus 198 l~~i~~v~~~~~~~~~PivVHCsaGvGRTGtfi 230 (286)
T 2ooq_A 198 LGFVRQVKFLNPPEAGPIVVHCSAGAGRTGCFI 230 (286)
T ss_dssp HHHHHHHHHHSCTTSCCEEEECSSSSHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCcEEEEeCCCCcHHHHHH
Confidence 35566665433 34679999999776 776543
No 179
>2hc1_A Receptor-type tyrosine-protein phosphatase beta; protein tyrosine phosphatase, WPD-loop, sulfamic acid, inhibitor, drug design, hydrolase; 1.30A {Homo sapiens} PDB: 2h03_A 2hc2_A 2i4g_A* 2h04_A* 2h02_A 2i3u_A 2i3r_A 2i4e_A* 2i4h_A* 2i5x_A* 2ahs_A
Probab=23.74 E-value=71 Score=28.45 Aligned_cols=30 Identities=27% Similarity=0.512 Sum_probs=19.3
Q ss_pred HHHHHHHh---cCCCCCeEEEEeCCCC-cHHHHH
Q 022409 168 QFLSKVEE---KLPKDTDLIVACQKGL-RSLAAC 197 (297)
Q Consensus 168 ~f~~~~~~---~l~kd~~IVvyC~~G~-RS~~aa 197 (297)
+|++.+.. ..+.+.||||+|..|. |+...+
T Consensus 203 ~~i~~v~~~~~~~~~~~PivVHCsaGvGRTGtfi 236 (291)
T 2hc1_A 203 QFVRTVRDYINRSPGAGPTVVHCSAGVGRTGTFI 236 (291)
T ss_dssp HHHHHHHHHHHHSSCCCCEEEECSSSSHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCEEEEeCCCCchhHHHH
Confidence 45555543 2345679999999776 776543
No 180
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=23.64 E-value=53 Score=27.84 Aligned_cols=31 Identities=16% Similarity=0.208 Sum_probs=20.9
Q ss_pred CeEEEEeCCCC------cHHHHHHHHHHcCCCCEEEcc
Q 022409 181 TDLIVACQKGL------RSLAACELLYNAGYRNLFWVQ 212 (297)
Q Consensus 181 ~~IVvyC~~G~------RS~~aa~~L~~~Gy~nV~~L~ 212 (297)
.|+||+|.++. +-...+..|...||. |+.++
T Consensus 56 ~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~-Vl~~D 92 (259)
T 4ao6_A 56 DRLVLLGHGGTTHKKVEYIEQVAKLLVGRGIS-AMAID 92 (259)
T ss_dssp SEEEEEEC--------CHHHHHHHHHHHTTEE-EEEEC
T ss_pred CCEEEEeCCCcccccchHHHHHHHHHHHCCCe-EEeec
Confidence 48999986443 123568889999994 87765
No 181
>2rhm_A Putative kinase; P-loop containing nucleoside triphosphate hydrolases fold, S genomics, joint center for structural genomics, JCSG; HET: MSE; 1.70A {Chloroflexus aurantiacus}
Probab=23.58 E-value=21 Score=28.64 Aligned_cols=28 Identities=14% Similarity=0.010 Sum_probs=22.8
Q ss_pred CcccccCcccCcccchhhhcccchhcCCC
Q 022409 231 LKFAGIGGLSEFLGYTSQLCYPFLHISYP 259 (297)
Q Consensus 231 ~~~~~~~G~t~~~gkT~~l~~l~~~~g~~ 259 (297)
-++..+.|.. |.|||-+-+.|+++.|++
T Consensus 5 ~~~I~l~G~~-GsGKST~~~~L~~~l~~~ 32 (193)
T 2rhm_A 5 PALIIVTGHP-ATGKTTLSQALATGLRLP 32 (193)
T ss_dssp CEEEEEEEST-TSSHHHHHHHHHHHHTCC
T ss_pred CeEEEEECCC-CCCHHHHHHHHHHHcCCe
Confidence 3567888998 599999999996666885
No 182
>1hv8_A Putative ATP-dependent RNA helicase MJ0669; RNA-binding protein, ATPase, RNA binding protein; 3.00A {Methanocaldococcus jannaschii} SCOP: c.37.1.19 c.37.1.19
Probab=23.47 E-value=54 Score=28.71 Aligned_cols=38 Identities=18% Similarity=0.299 Sum_probs=32.2
Q ss_pred CCCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHH
Q 022409 178 PKDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLE 216 (297)
Q Consensus 178 ~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~ 216 (297)
..+.+++|||.+-..+..++..|.+.|+. +..+.|++.
T Consensus 236 ~~~~~~lvf~~~~~~~~~l~~~L~~~~~~-~~~~~~~~~ 273 (367)
T 1hv8_A 236 NKEFYGLVFCKTKRDTKELASMLRDIGFK-AGAIHGDLS 273 (367)
T ss_dssp STTCCEEEECSSHHHHHHHHHHHHHTTCC-EEEECSSSC
T ss_pred cCCCcEEEEECCHHHHHHHHHHHHhcCCC-eEEeeCCCC
Confidence 35568999999888899999999999995 888988853
No 183
>2iyv_A Shikimate kinase, SK; transferase, aromatic amino acid biosynthesis, P-loop kinase, metal- binding, shikimate pathway; HET: ADP; 1.35A {Mycobacterium tuberculosis} SCOP: c.37.1.2 PDB: 2iyr_A* 2iyq_A* 2iyt_A 2iyu_A* 2iys_A* 2iyw_A* 2iyx_A* 2iyy_A* 2iyz_A* 2g1k_A* 1l4y_A* 1u8a_A* 1we2_A* 1zyu_A* 2dfn_A* 2dft_A* 2g1j_A 1l4u_A* 3baf_A*
Probab=23.45 E-value=19 Score=28.97 Aligned_cols=26 Identities=15% Similarity=-0.136 Sum_probs=21.3
Q ss_pred ccccCcccCcccchhhhcccchhcCCC
Q 022409 233 FAGIGGLSEFLGYTSQLCYPFLHISYP 259 (297)
Q Consensus 233 ~~~~~G~t~~~gkT~~l~~l~~~~g~~ 259 (297)
..+++|.. |.|||-+-+.|+++.|++
T Consensus 4 ~I~l~G~~-GsGKsT~a~~La~~lg~~ 29 (184)
T 2iyv_A 4 KAVLVGLP-GSGKSTIGRRLAKALGVG 29 (184)
T ss_dssp SEEEECST-TSSHHHHHHHHHHHHTCC
T ss_pred eEEEECCC-CCCHHHHHHHHHHHcCCC
Confidence 46778888 599999999996666996
No 184
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=23.43 E-value=1e+02 Score=24.06 Aligned_cols=44 Identities=20% Similarity=0.222 Sum_probs=32.1
Q ss_pred CCCCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHHHHHh
Q 022409 177 LPKDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLEAAEE 220 (297)
Q Consensus 177 l~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~aw~~ 220 (297)
.+++-+|++....-.-...+...|+..||..|..-..|..++..
T Consensus 9 m~k~~rILiVDD~~~~r~~l~~~L~~~G~~~v~~a~~g~~al~~ 52 (134)
T 3to5_A 9 LNKNMKILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALPM 52 (134)
T ss_dssp CCTTCCEEEECSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHH
T ss_pred hCCCCEEEEEeCCHHHHHHHHHHHHHcCCcEEEEECCHHHHHHH
Confidence 45555778777665555678888999999767777788777654
No 185
>2fsf_A Preprotein translocase SECA subunit; ATPase, DNA-RNA helicase, protein translocation, protein transport; 2.00A {Escherichia coli} PDB: 2fsg_A* 2fsh_A* 2fsi_A* 2vda_A 3bxz_A*
Probab=23.33 E-value=57 Score=34.16 Aligned_cols=39 Identities=18% Similarity=0.122 Sum_probs=33.9
Q ss_pred CCCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHHH
Q 022409 178 PKDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLEA 217 (297)
Q Consensus 178 ~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~a 217 (297)
.+..|++|+|++-..|..++..|.+.|++ +..|.|....
T Consensus 439 ~~gqpvLVft~sie~se~Ls~~L~~~gi~-~~vLnak~~~ 477 (853)
T 2fsf_A 439 AKGQPVLVGTISIEKSELVSNELTKAGIK-HNVLNAKFHA 477 (853)
T ss_dssp TTTCCEEEEESSHHHHHHHHHHHHHTTCC-CEECCTTCHH
T ss_pred cCCCCEEEEECcHHHHHHHHHHHHHCCCC-EEEecCChhH
Confidence 46679999999988999999999999996 8888888644
No 186
>2cjz_A Human protein tyrosine phosphatase PTPN5; protein phosphatase, STEP, hydrolase; HET: PTR; 1.70A {Homo sapiens} PDB: 2bij_A 2bv5_A*
Probab=23.31 E-value=82 Score=28.37 Aligned_cols=30 Identities=27% Similarity=0.400 Sum_probs=19.3
Q ss_pred HHHHHHHh----cCCCCCeEEEEeCCCC-cHHHHH
Q 022409 168 QFLSKVEE----KLPKDTDLIVACQKGL-RSLAAC 197 (297)
Q Consensus 168 ~f~~~~~~----~l~kd~~IVvyC~~G~-RS~~aa 197 (297)
+|++.+.. ..+...||||+|..|. |+...+
T Consensus 215 ~~i~~v~~~~~~~~~~~~PivVHCsaGvGRTGtfi 249 (305)
T 2cjz_A 215 HLVREVEEAAQQEGPHCAPIIVHSSAGIGRTGCFI 249 (305)
T ss_dssp HHHHHHHHHHHHTCSSCCCEEEEESSSSHHHHHHH
T ss_pred HHHHHHHHHhhcccCCCCCEEEEeCCCcchhHHHH
Confidence 45555543 2345679999999776 766543
No 187
>4az1_A Tyrosine specific protein phosphatase; hydrolase, drug design; 2.18A {Trypanosoma cruzi}
Probab=23.16 E-value=74 Score=28.43 Aligned_cols=30 Identities=20% Similarity=0.449 Sum_probs=19.6
Q ss_pred HHHHHHHHhcCCCCCeEEEEeCCCC-cHHHHH
Q 022409 167 KQFLSKVEEKLPKDTDLIVACQKGL-RSLAAC 197 (297)
Q Consensus 167 ~~f~~~~~~~l~kd~~IVvyC~~G~-RS~~aa 197 (297)
-+|++.+.... .+.||||+|..|. |+...+
T Consensus 207 l~~~~~v~~~~-~~~PivVHCsaGvGRTGtfi 237 (302)
T 4az1_A 207 EALLTNVKNSP-TTVPVVVHCSAGIGRTGTLI 237 (302)
T ss_dssp HHHHHHHHHSC-TTSCEEEESSSSSSHHHHHH
T ss_pred HHHHHHHHHhC-CCCCEEEECCCCCcHHHHHH
Confidence 35556655333 5579999999665 876544
No 188
>1z5z_A Helicase of the SNF2/RAD54 family; hydrolase, recombination, hydrolase-recombination complex; 2.00A {Sulfolobus solfataricus} SCOP: c.37.1.19
Probab=22.64 E-value=43 Score=29.50 Aligned_cols=38 Identities=8% Similarity=0.023 Sum_probs=29.8
Q ss_pred CCCCeEEEEeCCCCcHHHHHHHHHH-cCCCCEEEccccHH
Q 022409 178 PKDTDLIVACQKGLRSLAACELLYN-AGYRNLFWVQGGLE 216 (297)
Q Consensus 178 ~kd~~IVvyC~~G~RS~~aa~~L~~-~Gy~nV~~L~GG~~ 216 (297)
..+.++||||+.-.....+...|.. .|++ +..+.|+..
T Consensus 110 ~~~~kvlIFs~~~~~~~~l~~~L~~~~g~~-~~~l~G~~~ 148 (271)
T 1z5z_A 110 DEGDKIAIFTQFVDMGKIIRNIIEKELNTE-VPFLYGELS 148 (271)
T ss_dssp HTTCCEEEEESCHHHHHHHHHHHHHHHCSC-CCEECTTSC
T ss_pred hCCCeEEEEeccHHHHHHHHHHHHHhcCCc-EEEEECCCC
Confidence 3567999999876677778888887 4995 888999863
No 189
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=22.56 E-value=21 Score=30.15 Aligned_cols=38 Identities=29% Similarity=0.357 Sum_probs=27.8
Q ss_pred CeEEEEeCCCC-cHHHHHHHHHHc----CCCCEEEccccHHHHH
Q 022409 181 TDLIVACQKGL-RSLAACELLYNA----GYRNLFWVQGGLEAAE 219 (297)
Q Consensus 181 ~~IVvyC~~G~-RS~~aa~~L~~~----Gy~nV~~L~GG~~aw~ 219 (297)
.+|+|.|.+.. ||..|..+|++. |. ++....-|..+|.
T Consensus 35 ~~VLFVC~gNiCRSpmAEai~r~~~~~~g~-~~~v~SAGt~~~~ 77 (184)
T 4etn_A 35 MDIIFVCTGNTSRSPMAEALFKSIAEREGL-NVNVRSAGVFASP 77 (184)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHHTC-CEEEEEEETTCCT
T ss_pred CEEEEECCCchhHHHHHHHHHHHHHHhcCC-cEEEEeeecCCcC
Confidence 47999999665 999988888764 43 4666677776653
No 190
>1y1l_A Arsenate reductase (ARSC); detoxification, cadmium, oxidized form, structural genomics, PSI, protein structure initiative; 2.80A {Archaeoglobus fulgidus} SCOP: c.44.1.1
Probab=22.32 E-value=55 Score=25.30 Aligned_cols=34 Identities=21% Similarity=0.277 Sum_probs=23.4
Q ss_pred eEEEEeCCCC-cHHHHHHHHHHcCCCCEEEccccHH
Q 022409 182 DLIVACQKGL-RSLAACELLYNAGYRNLFWVQGGLE 216 (297)
Q Consensus 182 ~IVvyC~~G~-RS~~aa~~L~~~Gy~nV~~L~GG~~ 216 (297)
+|+|.|.+.. ||..|..+|+++.= ++.....|..
T Consensus 1 ~VLFVC~gN~cRSpmAEa~~~~~~~-~~~v~SAGt~ 35 (124)
T 1y1l_A 1 KVLFVCIHNTARSVMAEALFNAMAK-SWKAESAGVE 35 (124)
T ss_dssp CEEEEESSCSSHHHHHHHHHHTTCS-SCCEEEEESS
T ss_pred CEEEEeCCChhHHHHHHHHHHHhcC-CEEEEecCCC
Confidence 4899999665 99999999998742 2334444443
No 191
>1l8k_A T-cell protein-tyrosine phosphatase; hydrolase; 2.56A {Homo sapiens} SCOP: c.45.1.2
Probab=22.28 E-value=86 Score=28.27 Aligned_cols=31 Identities=32% Similarity=0.499 Sum_probs=19.9
Q ss_pred HHHHHHHhc---CCCCCeEEEEeCCCC-cHHHHHH
Q 022409 168 QFLSKVEEK---LPKDTDLIVACQKGL-RSLAACE 198 (297)
Q Consensus 168 ~f~~~~~~~---l~kd~~IVvyC~~G~-RS~~aa~ 198 (297)
+|+..+... .+.+.||||+|..|. |+...+.
T Consensus 194 ~~l~~v~~~~~~~~~~~PivVHCsaGvGRTGtfia 228 (314)
T 1l8k_A 194 NFLFKVRESGSLNPDHGPAVIHCSAGIGRSGTFSL 228 (314)
T ss_dssp HHHHHHHHTTTTSTTSCCEEEEESSSSSHHHHHHH
T ss_pred HHHHHHHHHhhccCCCCcEEEEcCCCCcHHHHHHH
Confidence 555555532 134679999999665 8776543
No 192
>2wmy_A WZB, putative acid phosphatase WZB; hydrolase; 2.21A {Escherichia coli}
Probab=22.16 E-value=75 Score=25.42 Aligned_cols=35 Identities=20% Similarity=0.228 Sum_probs=25.8
Q ss_pred CeEEEEeCCCC-cHHHHHHHHHHcCCCCEEEccccHH
Q 022409 181 TDLIVACQKGL-RSLAACELLYNAGYRNLFWVQGGLE 216 (297)
Q Consensus 181 ~~IVvyC~~G~-RS~~aa~~L~~~Gy~nV~~L~GG~~ 216 (297)
++|+|.|.+.. ||..|..+|++.. .++.....|..
T Consensus 9 ~~VLFVC~gN~cRSpmAEal~r~~~-~~~~v~SAGt~ 44 (150)
T 2wmy_A 9 DSILVICTGNICRSPIGERLLRRLL-PSKKINSAGVG 44 (150)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHC-TTSEEEEEETT
T ss_pred CEEEEEcCCchHHHHHHHHHHHHhc-CCCEEEecccc
Confidence 37999999665 9999999999864 23555556653
No 193
>3ake_A Cytidylate kinase; CMP kinase, CMP complex, open conformation, nucleotide metab transferase; HET: C5P; 1.50A {Thermus thermophilus} PDB: 3akc_A* 3akd_A*
Probab=21.97 E-value=21 Score=29.08 Aligned_cols=26 Identities=23% Similarity=0.147 Sum_probs=21.6
Q ss_pred ccccCcccCcccchhhhcccchhcCCC
Q 022409 233 FAGIGGLSEFLGYTSQLCYPFLHISYP 259 (297)
Q Consensus 233 ~~~~~G~t~~~gkT~~l~~l~~~~g~~ 259 (297)
..+++|.. |.|||-+-+.|++..|++
T Consensus 4 ~i~i~G~~-GsGKst~~~~la~~lg~~ 29 (208)
T 3ake_A 4 IVTIDGPS-ASGKSSVARRVAAALGVP 29 (208)
T ss_dssp EEEEECST-TSSHHHHHHHHHHHHTCC
T ss_pred EEEEECCC-CCCHHHHHHHHHHhcCCc
Confidence 56788888 599999999996667986
No 194
>3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, ALP; structural genomics, PSI-2, protein structu initiative; 1.90A {Thermoplasma acidophilum}
Probab=21.70 E-value=78 Score=24.26 Aligned_cols=32 Identities=19% Similarity=0.138 Sum_probs=23.7
Q ss_pred CCCeEEEEeCCCC--cHHHHHHHHHHcCCCCEEEc
Q 022409 179 KDTDLIVACQKGL--RSLAACELLYNAGYRNLFWV 211 (297)
Q Consensus 179 kd~~IVvyC~~G~--RS~~aa~~L~~~Gy~nV~~L 211 (297)
.+.++++.|.|.+ .+..|+..|++.|++ +-.+
T Consensus 12 ~g~dv~iv~~Gs~~~~a~eA~~~L~~~Gi~-v~vi 45 (118)
T 3ju3_A 12 KEADITFVTWGSQKGPILDVIEDLKEEGIS-ANLL 45 (118)
T ss_dssp SSCSEEEEEEGGGHHHHHHHHHHHHHTTCC-EEEE
T ss_pred CCCCEEEEEECccHHHHHHHHHHHHHCCCc-eEEE
Confidence 4567888888665 577889999999984 5444
No 195
>3fdi_A Uncharacterized protein; cytidylate kinase like protein, PSI, MCSG, PRK04182 class ME structural genomics, protein structure initiative; 2.20A {Eubacterium ventriosum}
Probab=21.68 E-value=22 Score=29.87 Aligned_cols=26 Identities=19% Similarity=-0.052 Sum_probs=22.5
Q ss_pred ccccCcccCcccchhhhcccchhcCCC
Q 022409 233 FAGIGGLSEFLGYTSQLCYPFLHISYP 259 (297)
Q Consensus 233 ~~~~~G~t~~~gkT~~l~~l~~~~g~~ 259 (297)
.+.|.|.. |.|||.+-+.||++.|||
T Consensus 8 iI~i~g~~-GsGk~ti~~~la~~lg~~ 33 (201)
T 3fdi_A 8 IIAIGREF-GSGGHLVAKKLAEHYNIP 33 (201)
T ss_dssp EEEEEECT-TSSHHHHHHHHHHHTTCC
T ss_pred EEEEeCCC-CCCHHHHHHHHHHHhCcC
Confidence 56788887 599999999998888997
No 196
>3b7o_A Tyrosine-protein phosphatase non-receptor type 11; SHP2, PTPN11, tyrosine phosphatase, structural genomics, STR genomics consortium, SGC, deafness; 1.60A {Homo sapiens} PDB: 3jrl_A* 3mow_A* 3o5x_A*
Probab=21.63 E-value=92 Score=28.15 Aligned_cols=31 Identities=23% Similarity=0.449 Sum_probs=20.7
Q ss_pred HHHHHHHh---cCCCCCeEEEEeCCCC-cHHHHHH
Q 022409 168 QFLSKVEE---KLPKDTDLIVACQKGL-RSLAACE 198 (297)
Q Consensus 168 ~f~~~~~~---~l~kd~~IVvyC~~G~-RS~~aa~ 198 (297)
+|++.+.. ..+.+.||||+|..|. |+...+.
T Consensus 224 ~fl~~v~~~~~~~~~~~PivVHCsaGvGRTGtfia 258 (316)
T 3b7o_A 224 DFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIV 258 (316)
T ss_dssp HHHHHHHHHHHTSTTCCCEEEEESSSSHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCCEEEEcCCCCcHHHHHHH
Confidence 56665543 2456789999999776 7765443
No 197
>3bl5_A Queuosine biosynthesis protein QUEC; PREQ1 biosynthesis, RNA modification, tRNA, hydrolase; 2.95A {Bacillus subtilis}
Probab=21.57 E-value=66 Score=26.53 Aligned_cols=28 Identities=14% Similarity=0.022 Sum_probs=23.3
Q ss_pred CCeEEEEeCCCCcHHHHHHHHHHcCCCCE
Q 022409 180 DTDLIVACQKGLRSLAACELLYNAGYRNL 208 (297)
Q Consensus 180 d~~IVvyC~~G~RS~~aa~~L~~~Gy~nV 208 (297)
+.+++|...||..|..++.+|.+.|+ +|
T Consensus 3 ~~~v~v~lSGG~DS~~ll~ll~~~~~-~v 30 (219)
T 3bl5_A 3 KEKAIVVFSGGQDSTTCLLWALKEFE-EV 30 (219)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHCS-EE
T ss_pred CCCEEEEccCcHHHHHHHHHHHHcCC-ce
Confidence 35788888899999999999999886 35
No 198
>4e22_A Cytidylate kinase; P-loop, CMP/ATP binding, transferase; 2.32A {Yersinia pseudotuberculosis}
Probab=21.18 E-value=23 Score=30.59 Aligned_cols=28 Identities=11% Similarity=-0.047 Sum_probs=22.9
Q ss_pred CcccccCcccCcccchhhhcccchhcCCC
Q 022409 231 LKFAGIGGLSEFLGYTSQLCYPFLHISYP 259 (297)
Q Consensus 231 ~~~~~~~G~t~~~gkT~~l~~l~~~~g~~ 259 (297)
-...+|.|.+ |.|||-+.+.|+++.|++
T Consensus 27 g~~I~I~G~~-GsGKSTl~k~La~~Lg~~ 54 (252)
T 4e22_A 27 APVITVDGPS-GAGKGTLCKALAESLNWR 54 (252)
T ss_dssp SCEEEEECCT-TSSHHHHHHHHHHHTTCE
T ss_pred CcEEEEECCC-CCCHHHHHHHHHHhcCCC
Confidence 3567888888 599999999997677984
No 199
>2i1y_A Receptor-type tyrosine-protein phosphatase; receptor-type protein tyrosine phosphatase precursor, phosph structural genomics, PSI; 2.23A {Homo sapiens} PDB: 2qep_A
Probab=21.15 E-value=92 Score=27.90 Aligned_cols=31 Identities=26% Similarity=0.386 Sum_probs=20.4
Q ss_pred HHHHHHHHhcC-CCCCeEEEEeCCCC-cHHHHH
Q 022409 167 KQFLSKVEEKL-PKDTDLIVACQKGL-RSLAAC 197 (297)
Q Consensus 167 ~~f~~~~~~~l-~kd~~IVvyC~~G~-RS~~aa 197 (297)
-+|++.+.... ....||||+|..|. |+...+
T Consensus 210 l~~~~~v~~~~~~~~~PivVHCsaGvGRTGtfi 242 (301)
T 2i1y_A 210 LDFRRKVNKCYRGRSCPIIVHCSDGAGRTGTYI 242 (301)
T ss_dssp HHHHHHHHHSCCCSSCCEEEECSSSSHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCEEEEECCCCchhHHHH
Confidence 35666665433 24579999999666 876544
No 200
>2i75_A Tyrosine-protein phosphatase non-receptor type 4; PTPN4, PTP, tyrosine phosphatase, MEG-1, structural genomics structural genomics consortium, SGC; 2.45A {Homo sapiens}
Probab=21.13 E-value=85 Score=28.49 Aligned_cols=30 Identities=27% Similarity=0.538 Sum_probs=19.8
Q ss_pred HHHHHHHhc-CCCCCeEEEEeCCCC-cHHHHH
Q 022409 168 QFLSKVEEK-LPKDTDLIVACQKGL-RSLAAC 197 (297)
Q Consensus 168 ~f~~~~~~~-l~kd~~IVvyC~~G~-RS~~aa 197 (297)
+|++.+... ...+.||||+|..|. |+...+
T Consensus 224 ~~i~~v~~~~~~~~~PivVHCsaGvGRTGtfi 255 (320)
T 2i75_A 224 DFVCHVRNKRAGKEEPVVVHCSAGIGRTGVLI 255 (320)
T ss_dssp HHHHHHHHHHTTCCSCEEEECSSSSSHHHHHH
T ss_pred HHHHHHHHHhccCCCCEEEEcCCCCcHHHHHH
Confidence 555665543 234679999999665 877654
No 201
>2dpl_A GMP synthetase, GMP synthase [glutamine-hydrolyzing] subunit B; pyrococcus horikoshii OT3, structural genomics, NPPSFA; 1.43A {Pyrococcus horikoshii} PDB: 2z0c_A 3a4i_A
Probab=21.07 E-value=73 Score=28.68 Aligned_cols=45 Identities=31% Similarity=0.448 Sum_probs=31.4
Q ss_pred HHHHHHHhcCCCCCeEEEEeCCCCcHHHHHHHHHHc-CCCCEE--Ecccc
Q 022409 168 QFLSKVEEKLPKDTDLIVACQKGLRSLAACELLYNA-GYRNLF--WVQGG 214 (297)
Q Consensus 168 ~f~~~~~~~l~kd~~IVvyC~~G~RS~~aa~~L~~~-Gy~nV~--~L~GG 214 (297)
+.++.+++.+. +.++++.+.||..|..++.+|.+. |++ +. .++-|
T Consensus 9 ~~~~~ir~~v~-~~kvlvalSGGvDSsvla~ll~~~~g~~-v~av~vd~g 56 (308)
T 2dpl_A 9 EKVREIRETVG-DSKAIIALSGGVDSSTAAVLAHKAIGDR-LHAVFVNTG 56 (308)
T ss_dssp HHHHHHHHHHT-TSCEEEECCSSHHHHHHHHHHHHHHGGG-EEEEEEECS
T ss_pred HHHHHHHHHhC-CCCEEEEEeChHHHHHHHHHHHHhhCCC-EEEEEEcCC
Confidence 34444554454 458888888999999999999887 874 53 44444
No 202
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=21.04 E-value=78 Score=25.00 Aligned_cols=28 Identities=25% Similarity=0.372 Sum_probs=23.5
Q ss_pred EEEeCCCCcHHHHHHHHHHcCCCCEEEcc
Q 022409 184 IVACQKGLRSLAACELLYNAGYRNLFWVQ 212 (297)
Q Consensus 184 VvyC~~G~RS~~aa~~L~~~Gy~nV~~L~ 212 (297)
|++...|.--..+|..|.+.|++ |.+++
T Consensus 5 V~IIGaGpaGL~aA~~La~~G~~-V~v~E 32 (336)
T 3kkj_A 5 IAIIGTGIAGLSAAQALTAAGHQ-VHLFD 32 (336)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCC-EEEEC
T ss_pred EEEECcCHHHHHHHHHHHHCCCC-EEEEE
Confidence 44557788889999999999995 99887
No 203
>3t61_A Gluconokinase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium, nysgrc; 2.20A {Sinorhizobium meliloti}
Probab=20.98 E-value=22 Score=29.08 Aligned_cols=28 Identities=21% Similarity=-0.046 Sum_probs=22.9
Q ss_pred CcccccCcccCcccchhhhcccchhcCCC
Q 022409 231 LKFAGIGGLSEFLGYTSQLCYPFLHISYP 259 (297)
Q Consensus 231 ~~~~~~~G~t~~~gkT~~l~~l~~~~g~~ 259 (297)
.++.++.|.+ |.|||-+.+.|++..|++
T Consensus 18 ~~~I~l~G~~-GsGKSTla~~L~~~lg~~ 45 (202)
T 3t61_A 18 PGSIVVMGVS-GSGKSSVGEAIAEACGYP 45 (202)
T ss_dssp SSCEEEECST-TSCHHHHHHHHHHHHTCC
T ss_pred CeEEEEECCC-CCCHHHHHHHHHHHhCCE
Confidence 4577889998 599999999996666886
No 204
>2gi4_A Possible phosphotyrosine protein phosphatase; low molecular weight, protein tyrosine phosphatase, bacterial phosphatase; NMR {Campylobacter jejuni}
Probab=20.84 E-value=67 Score=25.98 Aligned_cols=37 Identities=16% Similarity=0.314 Sum_probs=27.4
Q ss_pred eEEEEeCCCC-cHHHHHHHHHHc----CCC-CEEEccccHHHH
Q 022409 182 DLIVACQKGL-RSLAACELLYNA----GYR-NLFWVQGGLEAA 218 (297)
Q Consensus 182 ~IVvyC~~G~-RS~~aa~~L~~~----Gy~-nV~~L~GG~~aw 218 (297)
+|+|.|.+.. ||..|..+|+.. |+. ++.....|..+|
T Consensus 3 ~VLFVC~gNicRSpmAEai~~~~~~~~gl~~~~~v~SAGt~~~ 45 (156)
T 2gi4_A 3 KILFICLGNICRSPMAEFIMKDLVKKANLEKEFFINSAGTSGE 45 (156)
T ss_dssp EEEEECSSCSSHHHHHHHHHHHHHHHHTTTTTCEEEEEBSSCS
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHhCCCCCcEEEEeeecCCc
Confidence 6999999665 999988888764 553 356667777766
No 205
>2wja_A Putative acid phosphatase WZB; hydrolase; 2.50A {Escherichia coli}
Probab=20.84 E-value=76 Score=26.13 Aligned_cols=36 Identities=22% Similarity=0.244 Sum_probs=26.8
Q ss_pred CeEEEEeCCCC-cHHHHHHHHHHcCCCCEEEccccHHH
Q 022409 181 TDLIVACQKGL-RSLAACELLYNAGYRNLFWVQGGLEA 217 (297)
Q Consensus 181 ~~IVvyC~~G~-RS~~aa~~L~~~Gy~nV~~L~GG~~a 217 (297)
.+|+|.|.+.. ||..|..+|+... .++.....|..+
T Consensus 27 ~~VLFVCtgNicRSpmAEal~r~~~-~~~~v~SAGt~~ 63 (168)
T 2wja_A 27 DSILVICTGNICRSPIGERLLRRLL-PSKKINSAGVGA 63 (168)
T ss_dssp SEEEEEESSSSSHHHHHHHHHHHHS-TTSEEEEEETTC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHhc-CCeEEEeeecCC
Confidence 38999999665 9999999999865 235566666643
No 206
>1via_A Shikimate kinase; structural genomics, transferase; HET: MSE; 1.57A {Campylobacter jejuni} SCOP: c.37.1.2
Probab=20.75 E-value=19 Score=28.81 Aligned_cols=26 Identities=8% Similarity=-0.193 Sum_probs=21.7
Q ss_pred ccccCcccCcccchhhhcccchhcCCC
Q 022409 233 FAGIGGLSEFLGYTSQLCYPFLHISYP 259 (297)
Q Consensus 233 ~~~~~G~t~~~gkT~~l~~l~~~~g~~ 259 (297)
...+.|.. |.|||-+-+.|+++.|++
T Consensus 6 ~i~i~G~~-GsGKsTla~~La~~l~~~ 31 (175)
T 1via_A 6 NIVFIGFM-GSGKSTLARALAKDLDLV 31 (175)
T ss_dssp CEEEECCT-TSCHHHHHHHHHHHHTCE
T ss_pred EEEEEcCC-CCCHHHHHHHHHHHcCCC
Confidence 46778888 599999999997777985
No 207
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A*
Probab=20.65 E-value=1.3e+02 Score=26.97 Aligned_cols=39 Identities=13% Similarity=0.284 Sum_probs=30.3
Q ss_pred CCCCCeEEEEeCCCCcHHHHHHHHHHc----CCCCE--EEccccH
Q 022409 177 LPKDTDLIVACQKGLRSLAACELLYNA----GYRNL--FWVQGGL 215 (297)
Q Consensus 177 l~kd~~IVvyC~~G~RS~~aa~~L~~~----Gy~nV--~~L~GG~ 215 (297)
+.++.+|+|.+.||..|..++.+|.+. |+++| ..++-|+
T Consensus 21 ~~~~~~vlva~SGG~DS~~Ll~ll~~~~~~~g~~~v~av~vd~g~ 65 (317)
T 1wy5_A 21 FSGERRVLIAFSGGVDSVVLTDVLLKLKNYFSLKEVALAHFNHML 65 (317)
T ss_dssp CSSCCEEEEECCSSHHHHHHHHHHHHSTTTTTCSEEEEEEEECCS
T ss_pred CCCCCEEEEEecchHHHHHHHHHHHHHHHHcCCCEEEEEEEECCC
Confidence 566778999999999999999999875 77423 4666665
No 208
>3fht_A ATP-dependent RNA helicase DDX19B; DBP5, DEAD-box helicase, RNA dependent ATPase, mRNA export, nucleocytoplasmic transport, NUP214, CAN; HET: ANP; 2.20A {Homo sapiens} PDB: 3ews_A* 3g0h_A* 3fhc_B
Probab=20.60 E-value=56 Score=29.27 Aligned_cols=36 Identities=11% Similarity=0.182 Sum_probs=31.3
Q ss_pred CCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccH
Q 022409 179 KDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGL 215 (297)
Q Consensus 179 kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~ 215 (297)
+..++++||.+-..+..++..|...|+. +..+.|++
T Consensus 265 ~~~~~lvf~~~~~~~~~l~~~L~~~~~~-~~~~~~~~ 300 (412)
T 3fht_A 265 TIAQAMIFCHTRKTASWLAAELSKEGHQ-VALLSGEM 300 (412)
T ss_dssp SSSEEEEECSSHHHHHHHHHHHHHTTCC-CEEECTTS
T ss_pred CCCCEEEEeCCHHHHHHHHHHHHhCCCe-EEEecCCC
Confidence 3468999999888899999999999995 88999984
No 209
>2cm2_A Tyrosine-protein phosphatase non-receptor type 1; polymorphism, phosphorylation, endoplasmic reticulum, oxidation, hydrolase, acetylation; 1.5A {Homo sapiens} SCOP: c.45.1.2 PDB: 2cm3_A 2cmb_A* 2cmc_A* 2cne_A* 3a5j_A 2cma_A 3a5k_A 3eu0_A 3sme_A 2azr_A* 2b07_A* 2h4g_A* 2h4k_A* 2hb1_A* 2qbp_A* 2qbq_A* 2qbr_A* 2qbs_A* 2zmm_A* 2zn7_A* ...
Probab=20.50 E-value=80 Score=28.31 Aligned_cols=31 Identities=39% Similarity=0.673 Sum_probs=19.8
Q ss_pred HHHHHHHhc---CCCCCeEEEEeCCCC-cHHHHHH
Q 022409 168 QFLSKVEEK---LPKDTDLIVACQKGL-RSLAACE 198 (297)
Q Consensus 168 ~f~~~~~~~---l~kd~~IVvyC~~G~-RS~~aa~ 198 (297)
+|+..+... .+.+.||||+|..|. |+...+.
T Consensus 199 ~~l~~v~~~~~~~~~~~PivVHCsaGvGRTGtfia 233 (304)
T 2cm2_A 199 NFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCL 233 (304)
T ss_dssp HHHHHHHHHTTTSTTSBCEEEESSSSSSHHHHHHH
T ss_pred HHHHHHHHHhhccCCCCcEEEEcCcCCchhhHHHH
Confidence 455555532 134679999999665 8776543
No 210
>3i36_A Vascular protein tyrosine phosphatase 1; PTP, hydrolase; 1.84A {Rattus norvegicus} PDB: 2nz6_A 2cfv_A
Probab=20.45 E-value=88 Score=28.64 Aligned_cols=30 Identities=23% Similarity=0.553 Sum_probs=19.3
Q ss_pred HHHHHHHh---cCCCCCeEEEEeCCCC-cHHHHH
Q 022409 168 QFLSKVEE---KLPKDTDLIVACQKGL-RSLAAC 197 (297)
Q Consensus 168 ~f~~~~~~---~l~kd~~IVvyC~~G~-RS~~aa 197 (297)
+|+..+.. ..+.+.||||+|..|. |+...+
T Consensus 222 ~f~~~v~~~~~~~~~~~PiVVHCSAGvGRTGtfi 255 (342)
T 3i36_A 222 NFRYLVRDYMKQIPPESPILVHCSAGVGRTGTFI 255 (342)
T ss_dssp HHHHHHHHHHTTSCSSCCEEEESSSSSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCEEEEcCCCChHHHHHH
Confidence 45554443 2345679999999665 776544
No 211
>3s3e_A Tyrosine-protein phosphatase 10D; differentiation, neurogenesis, signal transduction, developm protein, hydrolase; 2.40A {Drosophila melanogaster} PDB: 3s3f_A 3s3h_A* 3s3k_A*
Probab=20.31 E-value=91 Score=28.07 Aligned_cols=31 Identities=19% Similarity=0.497 Sum_probs=20.5
Q ss_pred HHHHHHHHhcC-CCCCeEEEEeCCCC-cHHHHH
Q 022409 167 KQFLSKVEEKL-PKDTDLIVACQKGL-RSLAAC 197 (297)
Q Consensus 167 ~~f~~~~~~~l-~kd~~IVvyC~~G~-RS~~aa 197 (297)
-+|++.+.+.. +...||||+|..|. |+...+
T Consensus 221 l~fi~~v~~~~~~~~~PIvVHCsaGvGRTGtfi 253 (307)
T 3s3e_A 221 VRFVRAFRDRIGAEQRPIVVHCSAGVGRSGTFI 253 (307)
T ss_dssp HHHHHHHHHHHCSCCSCEEEECSSSSHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCEEEEcCCCchHHHHHH
Confidence 35666665443 34569999999665 776544
No 212
>3jux_A Protein translocase subunit SECA; protein translocation, ATPase, conformational change, peptide binding, ATP-binding, cell inner membrane; HET: ADP; 3.10A {Thermotoga maritima} PDB: 3din_A*
Probab=20.24 E-value=46 Score=34.61 Aligned_cols=38 Identities=13% Similarity=0.073 Sum_probs=32.9
Q ss_pred CCCCeEEEEeCCCCcHHHHHHHHHHcCCCCEEEccccHH
Q 022409 178 PKDTDLIVACQKGLRSLAACELLYNAGYRNLFWVQGGLE 216 (297)
Q Consensus 178 ~kd~~IVvyC~~G~RS~~aa~~L~~~Gy~nV~~L~GG~~ 216 (297)
.++.|++|+|++-..|..++..|.+.|++ ...|.|+..
T Consensus 472 ~~gqpVLVFt~S~e~sE~Ls~~L~~~Gi~-~~vLhgkq~ 509 (822)
T 3jux_A 472 KKGQPVLVGTTSIEKSELLSSMLKKKGIP-HQVLNAKYH 509 (822)
T ss_dssp HHTCCEEEEESSHHHHHHHHHHHHTTTCC-CEEECSCHH
T ss_pred hCCCCEEEEECCHHHHHHHHHHHHHCCCC-EEEeeCCch
Confidence 35679999999988999999999999996 778888844
No 213
>1zc0_A Tyrosine-protein phosphatase, non-receptor type 7; heptp, human tyrosine phosphatase catalytic domain, LC-PTP, hydrolase; 1.85A {Homo sapiens} PDB: 2gp0_A 2qdc_A 2hvl_A 2qdp_A 2qdm_A 3o4s_A 3o4t_A* 3o4u_A* 3d44_A* 3d42_A* 2a3k_A
Probab=20.14 E-value=1e+02 Score=27.87 Aligned_cols=30 Identities=23% Similarity=0.485 Sum_probs=19.2
Q ss_pred HHHHHHHhc---CCCCCeEEEEeCCCC-cHHHHH
Q 022409 168 QFLSKVEEK---LPKDTDLIVACQKGL-RSLAAC 197 (297)
Q Consensus 168 ~f~~~~~~~---l~kd~~IVvyC~~G~-RS~~aa 197 (297)
+|++.+.+. .+.+.||||+|..|. |+...+
T Consensus 218 ~~i~~v~~~~~~~~~~~PIvVHCsaGvGRTGtfi 251 (309)
T 1zc0_A 218 RLVAEVEESPETAAHPGPIVVHCSAGIGRTGCFI 251 (309)
T ss_dssp HHHHHHHTSCCCCSSCCCEEEEESSSSHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCCEEEEeCCCcchhHHHH
Confidence 455555432 235679999999766 776544
No 214
>1yfo_A D1, receptor protein tyrosine phosphatase alpha; hydrolase, signal transduction, glycoprotein, phosphorylation, signal; 2.25A {Mus musculus} SCOP: c.45.1.2
Probab=20.12 E-value=93 Score=27.87 Aligned_cols=31 Identities=26% Similarity=0.397 Sum_probs=20.2
Q ss_pred HHHHHHHHhcC-CCCCeEEEEeCCCC-cHHHHH
Q 022409 167 KQFLSKVEEKL-PKDTDLIVACQKGL-RSLAAC 197 (297)
Q Consensus 167 ~~f~~~~~~~l-~kd~~IVvyC~~G~-RS~~aa 197 (297)
-+|++.+.... +...||||+|..|. |+...+
T Consensus 211 l~~i~~v~~~~~~~~~PivVHCsaGvGRTGtfi 243 (302)
T 1yfo_A 211 LKFLKKVKACNPQYAGAIVVHCSAGVGRTGTFV 243 (302)
T ss_dssp HHHHHHHHHHSCTTSCCEEEECSSSSHHHHHHH
T ss_pred HHHHHHHHHhccCCCCCEEEECCCCCcHHHHHH
Confidence 35666665432 34579999999776 776544
No 215
>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A
Probab=20.10 E-value=15 Score=29.35 Aligned_cols=25 Identities=16% Similarity=0.183 Sum_probs=19.9
Q ss_pred cccccCcccCcccchhhhcccchhcC
Q 022409 232 KFAGIGGLSEFLGYTSQLCYPFLHIS 257 (297)
Q Consensus 232 ~~~~~~G~t~~~gkT~~l~~l~~~~g 257 (297)
.+.++.|.+ |+|||-+.+.|+++.|
T Consensus 4 ~~I~i~G~~-GsGKsT~~~~L~~~l~ 28 (192)
T 1kht_A 4 KVVVVTGVP-GVGSTTSSQLAMDNLR 28 (192)
T ss_dssp CEEEEECCT-TSCHHHHHHHHHHHHH
T ss_pred eEEEEECCC-CCCHHHHHHHHHHHHH
Confidence 457788888 5999999999966555
No 216
>1d1q_A Tyrosine phosphatase (E.C.3.1.3.48); beta-alpha-beta, hydrolase; HET: 4NP; 1.70A {Saccharomyces cerevisiae} SCOP: c.44.1.1 PDB: 1d2a_A* 1d1p_A*
Probab=20.05 E-value=68 Score=25.99 Aligned_cols=38 Identities=11% Similarity=-0.035 Sum_probs=28.0
Q ss_pred CeEEEEeCCCC-cHHHHHHHHHHc----CCC-C-EEEccccHHHH
Q 022409 181 TDLIVACQKGL-RSLAACELLYNA----GYR-N-LFWVQGGLEAA 218 (297)
Q Consensus 181 ~~IVvyC~~G~-RS~~aa~~L~~~----Gy~-n-V~~L~GG~~aw 218 (297)
.+|+|.|.+.. ||..|-.+|++. |+. + +.....|..+|
T Consensus 8 ~~VLFVCtgN~cRSpmAEal~~~~~~~~gl~~~~~~v~SAGt~~~ 52 (161)
T 1d1q_A 8 ISVAFIALGNFCRSPMAEAIFKHEVEKANLENRFNKIDSFGTSNY 52 (161)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCGGGEEEEEEEESSCT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHHHHcCCCCCeEEEEeccccCC
Confidence 47999999665 999988887764 553 2 66667777766
No 217
>2fek_A Low molecular weight protein-tyrosine- phosphatase WZB; phosphate binding, hydrolase; NMR {Escherichia coli K12}
Probab=20.03 E-value=91 Score=25.61 Aligned_cols=35 Identities=29% Similarity=0.369 Sum_probs=26.1
Q ss_pred CeEEEEeCCCC-cHHHHHHHHHHcCCCCEEEccccHH
Q 022409 181 TDLIVACQKGL-RSLAACELLYNAGYRNLFWVQGGLE 216 (297)
Q Consensus 181 ~~IVvyC~~G~-RS~~aa~~L~~~Gy~nV~~L~GG~~ 216 (297)
++|+|.|.+.. ||..|..+|+... .++.....|..
T Consensus 23 ~~VLFVCtgN~cRSpmAEal~r~~~-~~~~v~SAGt~ 58 (167)
T 2fek_A 23 NNILVVCVGNICRSPTAERLLQRYH-PELKVESAGLG 58 (167)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHHC-TTCEEEEEETT
T ss_pred CeEEEEcCCcHHHHHHHHHHHHHhc-CCeEEEeeecC
Confidence 37999999665 9999999999864 23555566663
No 218
>2cdn_A Adenylate kinase; phosphoryl transfer, associative mechanism, ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase; HET: ADP; 1.9A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1p4s_A
Probab=20.02 E-value=30 Score=28.26 Aligned_cols=27 Identities=15% Similarity=-0.054 Sum_probs=22.0
Q ss_pred cccccCcccCcccchhhhcccchhcCCC
Q 022409 232 KFAGIGGLSEFLGYTSQLCYPFLHISYP 259 (297)
Q Consensus 232 ~~~~~~G~t~~~gkT~~l~~l~~~~g~~ 259 (297)
.+.++.|.. |+|||-+-+.|+++.|++
T Consensus 21 ~~I~l~G~~-GsGKST~a~~La~~l~~~ 47 (201)
T 2cdn_A 21 MRVLLLGPP-GAGKGTQAVKLAEKLGIP 47 (201)
T ss_dssp CEEEEECCT-TSSHHHHHHHHHHHHTCC
T ss_pred eEEEEECCC-CCCHHHHHHHHHHHhCCc
Confidence 457788888 599999999996666986
Done!