Query 022411
Match_columns 297
No_of_seqs 282 out of 1972
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 05:04:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/022411.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/022411hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ld4_A Anamorsin; methyltransf 99.7 4.3E-17 1.5E-21 137.9 12.3 146 4-154 10-176 (176)
2 4gek_A TRNA (CMO5U34)-methyltr 99.2 5.2E-11 1.8E-15 108.3 10.1 93 4-98 68-181 (261)
3 1vl5_A Unknown conserved prote 99.0 3.1E-10 1.1E-14 101.1 7.0 119 6-124 37-186 (260)
4 3dh0_A SAM dependent methyltra 99.0 8.5E-10 2.9E-14 95.3 8.4 123 19-147 65-194 (219)
5 3dlc_A Putative S-adenosyl-L-m 99.0 1.4E-09 4.8E-14 93.1 9.1 108 19-126 69-201 (219)
6 3dtn_A Putative methyltransfer 99.0 1.3E-09 4.5E-14 95.2 8.5 79 18-98 70-151 (234)
7 4hg2_A Methyltransferase type 98.9 6.1E-10 2.1E-14 101.1 4.7 75 19-98 64-138 (257)
8 1nkv_A Hypothetical protein YJ 98.9 1.7E-09 5.8E-14 95.6 7.0 120 5-125 35-184 (256)
9 3f4k_A Putative methyltransfer 98.9 3.7E-09 1.3E-13 93.5 9.0 121 5-125 45-193 (257)
10 3ujc_A Phosphoethanolamine N-m 98.9 1.3E-09 4.3E-14 96.5 5.8 121 5-126 54-204 (266)
11 1xxl_A YCGJ protein; structura 98.9 4.9E-09 1.7E-13 92.5 9.6 121 5-125 20-171 (239)
12 2km1_A Protein DRE2; yeast, an 98.9 3.6E-10 1.2E-14 93.4 1.9 106 1-124 4-114 (136)
13 3kkz_A Uncharacterized protein 98.9 5.9E-09 2E-13 93.3 10.0 121 5-125 45-193 (267)
14 3g5l_A Putative S-adenosylmeth 98.9 1.7E-09 5.9E-14 95.7 5.7 77 18-96 69-146 (253)
15 2o57_A Putative sarcosine dime 98.9 2.4E-09 8.3E-14 97.1 6.7 121 5-125 81-231 (297)
16 3hnr_A Probable methyltransfer 98.9 5.9E-09 2E-13 90.0 8.4 103 18-124 69-197 (220)
17 4fsd_A Arsenic methyltransfera 98.8 4.4E-09 1.5E-13 100.1 7.4 122 5-126 82-249 (383)
18 3bus_A REBM, methyltransferase 98.8 3.4E-09 1.2E-13 94.7 6.2 120 6-125 61-213 (273)
19 3ocj_A Putative exported prote 98.8 4.4E-09 1.5E-13 96.4 7.1 108 18-126 145-289 (305)
20 3i9f_A Putative type 11 methyl 98.8 4.7E-09 1.6E-13 87.2 6.1 132 6-152 17-166 (170)
21 3h2b_A SAM-dependent methyltra 98.8 3.5E-09 1.2E-13 90.5 5.4 106 18-127 65-181 (203)
22 3l8d_A Methyltransferase; stru 98.8 4.6E-09 1.6E-13 91.9 6.2 120 5-126 52-198 (242)
23 2yqz_A Hypothetical protein TT 98.8 5.8E-09 2E-13 92.2 6.9 90 5-94 38-140 (263)
24 2p7i_A Hypothetical protein; p 98.8 8E-09 2.7E-13 90.0 7.2 116 6-125 42-196 (250)
25 3vc1_A Geranyl diphosphate 2-C 98.8 7.2E-09 2.5E-13 95.2 7.0 122 5-126 116-267 (312)
26 3sm3_A SAM-dependent methyltra 98.8 1.1E-08 3.6E-13 88.7 7.4 94 5-98 29-144 (235)
27 3gu3_A Methyltransferase; alph 98.8 1.1E-08 3.8E-13 92.8 7.4 80 17-97 48-128 (284)
28 3mgg_A Methyltransferase; NYSG 98.7 1.2E-08 4.1E-13 91.4 7.1 80 18-97 63-144 (276)
29 1xtp_A LMAJ004091AAA; SGPP, st 98.7 3.1E-09 1.1E-13 93.7 3.1 120 6-126 93-236 (254)
30 1y8c_A S-adenosylmethionine-de 98.7 9.5E-09 3.3E-13 89.6 6.0 89 7-96 38-143 (246)
31 3ccf_A Cyclopropane-fatty-acyl 98.7 1.2E-08 4.1E-13 92.0 6.5 89 6-99 57-158 (279)
32 3bkw_A MLL3908 protein, S-aden 98.7 6E-09 2.1E-13 91.0 4.3 77 18-96 68-145 (243)
33 1pjz_A Thiopurine S-methyltran 98.7 5.2E-09 1.8E-13 90.7 3.4 79 16-94 44-139 (203)
34 2ex4_A Adrenal gland protein A 98.7 7.6E-09 2.6E-13 91.2 4.4 109 18-126 104-223 (241)
35 3dli_A Methyltransferase; PSI- 98.7 1.2E-08 4E-13 89.9 5.6 116 5-127 40-183 (240)
36 2a14_A Indolethylamine N-methy 98.7 1.4E-08 4.6E-13 91.4 5.8 121 6-126 55-236 (263)
37 2aot_A HMT, histamine N-methyl 98.7 8.4E-09 2.9E-13 94.0 4.4 103 20-124 86-217 (292)
38 4htf_A S-adenosylmethionine-de 98.7 1.1E-08 3.9E-13 92.3 5.1 80 18-97 92-175 (285)
39 2gs9_A Hypothetical protein TT 98.7 2.1E-08 7.1E-13 86.1 6.2 89 6-98 36-135 (211)
40 3e23_A Uncharacterized protein 98.7 2.7E-08 9.4E-13 85.5 6.3 116 6-127 43-181 (211)
41 2p8j_A S-adenosylmethionine-de 98.6 1.7E-08 5.8E-13 86.3 4.5 77 21-97 51-130 (209)
42 3e8s_A Putative SAM dependent 98.6 3.8E-08 1.3E-12 84.6 6.2 104 18-126 76-207 (227)
43 3g2m_A PCZA361.24; SAM-depende 98.6 9.1E-08 3.1E-12 87.1 8.7 81 17-98 105-193 (299)
44 1vlm_A SAM-dependent methyltra 98.6 3.3E-07 1.1E-11 79.5 11.4 113 7-125 48-185 (219)
45 3d2l_A SAM-dependent methyltra 98.6 4.6E-08 1.6E-12 85.4 5.9 89 5-94 32-136 (243)
46 3g5t_A Trans-aconitate 3-methy 98.6 4.6E-08 1.6E-12 89.1 5.5 81 16-96 61-150 (299)
47 3lcc_A Putative methyl chlorid 98.6 3.4E-08 1.2E-12 86.5 4.2 108 18-126 90-205 (235)
48 3ege_A Putative methyltransfer 98.6 1.8E-08 6.3E-13 90.1 2.5 114 5-125 33-175 (261)
49 3orh_A Guanidinoacetate N-meth 98.6 2E-08 7E-13 89.1 2.7 119 6-124 60-206 (236)
50 1kpg_A CFA synthase;, cyclopro 98.6 9.7E-08 3.3E-12 86.0 7.2 91 5-98 63-171 (287)
51 3ou2_A SAM-dependent methyltra 98.6 9E-08 3.1E-12 81.9 6.7 90 5-98 45-149 (218)
52 3pfg_A N-methyltransferase; N, 98.5 4.2E-08 1.4E-12 87.3 4.4 73 18-95 74-151 (263)
53 2gb4_A Thiopurine S-methyltran 98.5 5.9E-08 2E-12 87.5 5.4 80 16-95 90-191 (252)
54 2i62_A Nicotinamide N-methyltr 98.5 9.7E-08 3.3E-12 84.4 6.5 108 19-126 82-237 (265)
55 3dp7_A SAM-dependent methyltra 98.5 2.3E-07 7.9E-12 87.4 9.3 107 19-127 206-341 (363)
56 2p35_A Trans-aconitate 2-methy 98.5 8.4E-08 2.9E-12 84.6 5.4 88 6-98 33-135 (259)
57 1ri5_A MRNA capping enzyme; me 98.5 1.2E-07 4.2E-12 85.1 6.1 93 5-97 63-176 (298)
58 1zx0_A Guanidinoacetate N-meth 98.5 4.9E-08 1.7E-12 85.9 3.3 106 18-123 85-205 (236)
59 2g72_A Phenylethanolamine N-me 98.5 5.7E-08 2E-12 88.0 3.8 109 18-126 96-254 (289)
60 3evz_A Methyltransferase; NYSG 98.5 9.8E-07 3.3E-11 76.7 11.3 113 4-122 53-200 (230)
61 1ve3_A Hypothetical protein PH 98.5 1.6E-07 5.4E-12 81.1 6.0 91 7-97 39-144 (227)
62 2fk8_A Methoxy mycolic acid sy 98.5 2.3E-07 7.8E-12 85.0 7.2 118 5-125 89-251 (318)
63 3i53_A O-methyltransferase; CO 98.4 3.1E-07 1.1E-11 85.0 7.8 104 21-127 198-320 (332)
64 3hem_A Cyclopropane-fatty-acyl 98.4 3.6E-07 1.2E-11 83.2 7.9 91 5-98 71-186 (302)
65 4df3_A Fibrillarin-like rRNA/T 98.4 4.8E-07 1.6E-11 81.2 8.4 126 4-131 75-220 (233)
66 2kw5_A SLR1183 protein; struct 98.4 2.4E-07 8.3E-12 78.9 6.0 105 18-125 53-168 (202)
67 3ofk_A Nodulation protein S; N 98.4 2.1E-07 7.1E-12 80.1 5.4 78 18-97 75-156 (216)
68 2zfu_A Nucleomethylin, cerebra 98.4 5E-07 1.7E-11 77.7 7.3 79 42-125 98-176 (215)
69 2xvm_A Tellurite resistance pr 98.4 2.5E-07 8.6E-12 78.0 5.3 91 6-97 32-138 (199)
70 3cc8_A Putative methyltransfer 98.4 2.4E-07 8.2E-12 79.6 5.1 114 6-125 32-182 (230)
71 2vdw_A Vaccinia virus capping 98.4 1.6E-07 5.4E-12 86.9 4.0 80 18-97 73-171 (302)
72 3cgg_A SAM-dependent methyltra 98.4 9E-07 3.1E-11 73.9 8.1 112 5-125 45-172 (195)
73 2pxx_A Uncharacterized protein 98.4 3.5E-07 1.2E-11 77.9 5.6 93 5-98 41-162 (215)
74 2r3s_A Uncharacterized protein 98.4 5.5E-07 1.9E-11 82.8 7.2 106 19-126 192-321 (335)
75 3gwz_A MMCR; methyltransferase 98.4 7.5E-07 2.6E-11 84.0 8.3 103 21-126 231-354 (369)
76 3jwh_A HEN1; methyltransferase 98.4 5.2E-07 1.8E-11 77.9 6.5 79 18-96 55-142 (217)
77 3e05_A Precorrin-6Y C5,15-meth 98.4 1.1E-06 3.7E-11 75.2 8.4 111 5-125 39-164 (204)
78 3jwg_A HEN1, methyltransferase 98.3 5.5E-07 1.9E-11 77.7 6.3 80 17-96 54-142 (219)
79 3bxo_A N,N-dimethyltransferase 98.3 9.2E-07 3.2E-11 76.8 7.7 86 6-96 40-142 (239)
80 1yzh_A TRNA (guanine-N(7)-)-me 98.3 1.4E-06 4.7E-11 75.4 8.4 99 19-124 68-178 (214)
81 3fpf_A Mtnas, putative unchara 98.3 9E-07 3.1E-11 82.2 7.6 89 4-97 120-224 (298)
82 3mcz_A O-methyltransferase; ad 98.3 9E-07 3.1E-11 82.3 6.7 117 22-147 209-350 (352)
83 3m70_A Tellurite resistance pr 98.3 6.6E-07 2.3E-11 80.6 5.5 80 17-97 143-225 (286)
84 3grz_A L11 mtase, ribosomal pr 98.3 5.3E-07 1.8E-11 77.2 4.5 132 5-153 59-204 (205)
85 1fbn_A MJ fibrillarin homologu 98.3 2.4E-06 8.4E-11 74.8 8.4 116 5-128 73-213 (230)
86 2fca_A TRNA (guanine-N(7)-)-me 98.3 1.3E-06 4.6E-11 76.0 6.7 99 18-123 64-174 (213)
87 3bkx_A SAM-dependent methyltra 98.2 9.6E-06 3.3E-10 72.1 12.1 71 28-98 86-162 (275)
88 2qe6_A Uncharacterized protein 98.2 1.3E-06 4.5E-11 79.4 6.1 79 19-98 107-199 (274)
89 1xdz_A Methyltransferase GIDB; 98.2 1.4E-06 4.8E-11 76.9 5.9 112 6-125 70-199 (240)
90 1x19_A CRTF-related protein; m 98.2 3.6E-06 1.2E-10 78.7 9.0 105 20-127 218-347 (359)
91 2ip2_A Probable phenazine-spec 98.2 1.7E-06 5.8E-11 79.8 6.6 103 21-126 196-320 (334)
92 1qzz_A RDMB, aclacinomycin-10- 98.2 2.3E-06 7.8E-11 80.1 7.4 104 21-127 211-338 (374)
93 3mti_A RRNA methylase; SAM-dep 98.2 1E-06 3.5E-11 74.0 4.4 93 5-97 21-137 (185)
94 4a6d_A Hydroxyindole O-methylt 98.2 1.2E-05 4.3E-10 75.4 12.2 115 26-148 212-348 (353)
95 3bgv_A MRNA CAP guanine-N7 met 98.2 1.2E-06 4.2E-11 80.2 4.7 92 6-97 34-157 (313)
96 3m33_A Uncharacterized protein 98.1 1.6E-06 5.3E-11 75.8 4.8 103 6-125 48-164 (226)
97 3thr_A Glycine N-methyltransfe 98.1 1E-06 3.5E-11 79.4 3.7 80 18-97 81-177 (293)
98 3g07_A 7SK snRNA methylphospha 98.1 7.3E-07 2.5E-11 81.4 2.7 55 41-95 154-220 (292)
99 3ggd_A SAM-dependent methyltra 98.1 2.2E-06 7.4E-11 75.2 5.3 92 5-98 55-166 (245)
100 1dus_A MJ0882; hypothetical pr 98.1 6.9E-06 2.4E-10 68.3 7.7 92 6-98 52-160 (194)
101 4e2x_A TCAB9; kijanose, tetron 98.1 2.5E-07 8.5E-12 88.3 -1.6 119 6-126 107-251 (416)
102 1tw3_A COMT, carminomycin 4-O- 98.1 5E-06 1.7E-10 77.4 7.0 103 22-127 213-338 (360)
103 2avn_A Ubiquinone/menaquinone 98.1 1.8E-06 6.1E-11 76.9 3.4 87 6-97 54-154 (260)
104 3lst_A CALO1 methyltransferase 98.1 9.3E-06 3.2E-10 75.7 8.5 85 40-127 231-335 (348)
105 2pwy_A TRNA (adenine-N(1)-)-me 98.0 2.8E-06 9.6E-11 74.8 4.6 112 5-127 95-223 (258)
106 3g89_A Ribosomal RNA small sub 98.0 5E-06 1.7E-10 74.6 6.2 113 6-126 80-210 (249)
107 1af7_A Chemotaxis receptor met 98.0 3.3E-06 1.1E-10 77.3 5.0 77 18-94 139-251 (274)
108 1wzn_A SAM-dependent methyltra 98.0 4.3E-06 1.5E-10 73.5 5.4 78 18-96 65-146 (252)
109 3bwc_A Spermidine synthase; SA 98.0 6.1E-06 2.1E-10 76.1 6.5 119 5-126 94-238 (304)
110 3lpm_A Putative methyltransfer 98.0 8E-06 2.8E-10 72.9 7.0 102 18-127 74-200 (259)
111 3giw_A Protein of unknown func 98.0 4.1E-06 1.4E-10 77.0 5.0 82 17-98 106-203 (277)
112 1l3i_A Precorrin-6Y methyltran 98.0 9.4E-06 3.2E-10 67.4 6.8 110 5-125 32-156 (192)
113 3dmg_A Probable ribosomal RNA 98.0 5E-06 1.7E-10 79.4 5.6 93 6-98 233-343 (381)
114 3dxy_A TRNA (guanine-N(7)-)-me 98.0 2.3E-06 7.8E-11 75.2 2.8 78 19-96 61-151 (218)
115 3p9n_A Possible methyltransfer 98.0 4.1E-06 1.4E-10 70.9 4.0 80 19-98 70-156 (189)
116 1yb2_A Hypothetical protein TA 98.0 5.2E-06 1.8E-10 74.9 4.9 109 5-126 109-235 (275)
117 3hm2_A Precorrin-6Y C5,15-meth 98.0 1E-05 3.5E-10 66.9 6.3 93 19-122 52-147 (178)
118 3njr_A Precorrin-6Y methylase; 98.0 2E-05 6.7E-10 68.2 8.1 107 6-123 55-175 (204)
119 3ckk_A TRNA (guanine-N(7)-)-me 97.9 5.3E-06 1.8E-10 73.7 4.3 99 18-123 72-190 (235)
120 2ipx_A RRNA 2'-O-methyltransfe 97.9 1.1E-05 3.7E-10 70.6 6.1 122 5-129 76-218 (233)
121 3reo_A (ISO)eugenol O-methyltr 97.9 5.7E-06 2E-10 78.1 4.5 85 40-127 245-354 (368)
122 1i9g_A Hypothetical protein RV 97.9 9.5E-06 3.2E-10 72.6 5.7 111 5-126 98-228 (280)
123 2b3t_A Protein methyltransfera 97.9 1.2E-05 4.2E-10 72.3 6.1 99 18-125 135-260 (276)
124 3mb5_A SAM-dependent methyltra 97.9 1.5E-05 5E-10 70.4 6.4 111 5-127 92-221 (255)
125 1p91_A Ribosomal RNA large sub 97.9 1E-05 3.4E-10 72.0 4.7 83 6-98 85-181 (269)
126 3lbf_A Protein-L-isoaspartate 97.9 1.2E-05 4E-10 68.8 5.0 88 5-97 76-176 (210)
127 3mq2_A 16S rRNA methyltransfer 97.9 6.6E-05 2.3E-09 64.5 9.6 105 19-124 54-180 (218)
128 1fp2_A Isoflavone O-methyltran 97.8 6.4E-06 2.2E-10 76.9 3.2 83 41-126 231-339 (352)
129 3q7e_A Protein arginine N-meth 97.8 1.7E-05 6E-10 74.4 6.2 87 6-93 66-171 (349)
130 3uwp_A Histone-lysine N-methyl 97.8 4E-06 1.4E-10 81.3 1.5 79 19-97 200-290 (438)
131 3eey_A Putative rRNA methylase 97.8 9.4E-06 3.2E-10 68.7 3.6 93 5-97 21-141 (197)
132 2qm3_A Predicted methyltransfe 97.8 2.3E-05 7.9E-10 74.1 6.5 102 19-122 198-303 (373)
133 1nt2_A Fibrillarin-like PRE-rR 97.8 3.7E-05 1.3E-09 66.9 7.2 122 5-130 56-197 (210)
134 3htx_A HEN1; HEN1, small RNA m 97.8 2.6E-05 9E-10 81.3 7.0 80 17-97 747-836 (950)
135 3q87_B N6 adenine specific DNA 97.8 2.3E-05 7.8E-10 65.6 5.5 103 7-126 24-147 (170)
136 1o54_A SAM-dependent O-methylt 97.8 2.4E-05 8.2E-10 70.3 5.9 109 6-126 112-237 (277)
137 2fyt_A Protein arginine N-meth 97.8 2.7E-05 9.3E-10 72.8 6.2 86 6-92 64-168 (340)
138 1fp1_D Isoliquiritigenin 2'-O- 97.8 3.3E-05 1.1E-09 72.7 6.6 84 40-126 251-358 (372)
139 3p9c_A Caffeic acid O-methyltr 97.8 5.5E-05 1.9E-09 71.2 8.1 85 40-127 243-352 (364)
140 1vbf_A 231AA long hypothetical 97.7 4E-05 1.4E-09 66.4 6.5 87 5-97 69-167 (231)
141 2ift_A Putative methylase HI07 97.7 1.1E-05 3.8E-10 69.4 2.8 81 18-98 78-166 (201)
142 2nxc_A L11 mtase, ribosomal pr 97.7 1.7E-05 5.8E-10 71.0 3.8 111 5-125 119-241 (254)
143 4dzr_A Protein-(glutamine-N5) 97.7 1.3E-06 4.5E-11 74.2 -3.5 99 19-125 57-189 (215)
144 2fpo_A Methylase YHHF; structu 97.7 2E-05 7E-10 67.8 4.0 80 18-97 79-162 (202)
145 2yvl_A TRMI protein, hypotheti 97.7 0.0001 3.5E-09 64.3 8.1 110 5-126 90-213 (248)
146 3iv6_A Putative Zn-dependent a 97.7 3E-05 1E-09 70.5 4.5 86 6-97 45-150 (261)
147 2pjd_A Ribosomal RNA small sub 97.7 3.4E-05 1.2E-09 71.9 5.0 78 18-97 222-305 (343)
148 2yxe_A Protein-L-isoaspartate 97.7 7E-05 2.4E-09 64.1 6.6 88 5-97 76-179 (215)
149 2yxd_A Probable cobalt-precorr 97.7 8.4E-05 2.9E-09 61.2 6.8 103 6-121 35-150 (183)
150 1ej0_A FTSJ; methyltransferase 97.6 7E-05 2.4E-09 60.8 6.0 93 4-98 20-139 (180)
151 2fhp_A Methylase, putative; al 97.6 1.8E-05 6.3E-10 65.8 2.5 81 18-98 69-157 (187)
152 3p2e_A 16S rRNA methylase; met 97.6 1.3E-05 4.5E-10 70.6 1.4 106 19-124 51-181 (225)
153 2frn_A Hypothetical protein PH 97.6 6.5E-05 2.2E-09 68.1 5.9 99 19-122 151-251 (278)
154 2ozv_A Hypothetical protein AT 97.6 8.1E-05 2.8E-09 66.7 6.5 77 20-96 64-171 (260)
155 3tma_A Methyltransferase; thum 97.6 8.2E-05 2.8E-09 69.5 6.7 80 18-97 230-319 (354)
156 1r18_A Protein-L-isoaspartate( 97.6 7.9E-05 2.7E-09 64.8 5.9 73 19-97 117-196 (227)
157 3gdh_A Trimethylguanosine synt 97.6 1.7E-06 5.8E-11 75.8 -4.9 77 17-94 101-180 (241)
158 1i1n_A Protein-L-isoaspartate 97.6 0.0001 3.4E-09 63.7 6.5 89 4-97 75-184 (226)
159 1dl5_A Protein-L-isoaspartate 97.6 5.3E-05 1.8E-09 69.8 4.6 87 5-96 74-176 (317)
160 3r0q_C Probable protein argini 97.5 6.4E-05 2.2E-09 71.2 5.2 88 6-95 63-169 (376)
161 2pbf_A Protein-L-isoaspartate 97.5 7.2E-05 2.5E-09 64.7 5.2 89 4-97 78-195 (227)
162 1jg1_A PIMT;, protein-L-isoasp 97.5 0.00013 4.6E-09 63.7 6.6 88 5-98 90-192 (235)
163 3id6_C Fibrillarin-like rRNA/T 97.5 0.00026 9E-09 63.1 8.5 125 4-131 74-219 (232)
164 1ixk_A Methyltransferase; open 97.5 0.00016 5.4E-09 66.9 7.1 101 19-123 146-270 (315)
165 1g8a_A Fibrillarin-like PRE-rR 97.5 0.0004 1.4E-08 60.0 9.2 88 5-95 72-178 (227)
166 3sso_A Methyltransferase; macr 97.5 2.9E-05 1E-09 75.0 2.1 57 40-97 263-326 (419)
167 1g6q_1 HnRNP arginine N-methyl 97.5 0.00012 4.2E-09 67.9 6.2 72 20-92 65-142 (328)
168 1jsx_A Glucose-inhibited divis 97.5 9.7E-05 3.3E-09 62.7 5.0 86 7-96 66-166 (207)
169 1zg3_A Isoflavanone 4'-O-methy 97.5 0.00024 8.3E-09 66.2 8.1 84 40-126 235-345 (358)
170 2esr_A Methyltransferase; stru 97.5 2.4E-05 8.4E-10 65.0 1.0 81 18-98 56-141 (177)
171 4dcm_A Ribosomal RNA large sub 97.5 0.0001 3.6E-09 70.0 5.3 80 17-97 247-336 (375)
172 2vdv_E TRNA (guanine-N(7)-)-me 97.4 0.00012 4.3E-09 64.5 5.3 77 19-95 76-173 (246)
173 3dr5_A Putative O-methyltransf 97.4 4.2E-05 1.4E-09 67.2 2.0 78 17-96 82-164 (221)
174 3adn_A Spermidine synthase; am 97.4 0.00022 7.6E-09 65.6 6.9 91 6-96 83-199 (294)
175 3u81_A Catechol O-methyltransf 97.4 5.5E-05 1.9E-09 65.6 2.7 80 17-97 84-172 (221)
176 3gjy_A Spermidine synthase; AP 97.4 0.00011 3.6E-09 68.8 4.3 80 18-97 115-202 (317)
177 1ws6_A Methyltransferase; stru 97.4 3.1E-05 1.1E-09 63.3 0.3 79 19-98 66-150 (171)
178 3ntv_A MW1564 protein; rossman 97.3 7.2E-05 2.5E-09 65.6 2.5 79 17-97 96-178 (232)
179 2b25_A Hypothetical protein; s 97.3 0.00012 4.2E-09 67.6 3.9 89 5-97 104-221 (336)
180 2b2c_A Spermidine synthase; be 97.3 0.00026 9E-09 65.7 5.8 90 6-95 108-222 (314)
181 3tfw_A Putative O-methyltransf 97.3 0.00011 3.8E-09 65.2 3.1 79 17-97 89-172 (248)
182 2xyq_A Putative 2'-O-methyl tr 97.3 0.00023 7.9E-09 65.6 5.1 78 41-126 105-195 (290)
183 1iy9_A Spermidine synthase; ro 97.3 0.00022 7.5E-09 64.7 4.9 103 19-125 102-215 (275)
184 2plw_A Ribosomal RNA methyltra 97.2 0.00036 1.2E-08 58.8 5.5 93 4-97 20-156 (201)
185 2y1w_A Histone-arginine methyl 97.2 0.00026 8.9E-09 66.2 4.9 87 6-94 50-154 (348)
186 1uir_A Polyamine aminopropyltr 97.2 0.00012 4.2E-09 67.6 2.4 90 6-95 77-195 (314)
187 2gpy_A O-methyltransferase; st 97.2 0.00019 6.6E-09 62.4 3.3 78 18-97 80-162 (233)
188 3c3p_A Methyltransferase; NP_9 97.2 0.00015 5E-09 62.2 2.5 77 17-96 82-161 (210)
189 2i7c_A Spermidine synthase; tr 97.2 0.00056 1.9E-08 62.2 6.5 91 6-96 78-193 (283)
190 1o9g_A RRNA methyltransferase; 97.2 0.00017 5.8E-09 63.7 2.9 52 45-96 149-215 (250)
191 3fzg_A 16S rRNA methylase; met 97.1 7.3E-05 2.5E-09 65.4 0.1 79 16-95 73-152 (200)
192 1inl_A Spermidine synthase; be 97.1 0.00038 1.3E-08 63.8 4.8 90 7-96 91-206 (296)
193 1xj5_A Spermidine synthase 1; 97.1 0.00022 7.7E-09 66.8 3.3 76 19-94 147-234 (334)
194 2o07_A Spermidine synthase; st 97.1 0.00016 5.4E-09 66.8 2.2 91 6-96 95-210 (304)
195 2pt6_A Spermidine synthase; tr 97.1 0.00038 1.3E-08 64.7 4.5 91 6-96 116-231 (321)
196 3a27_A TYW2, uncharacterized p 97.1 0.00038 1.3E-08 62.8 4.3 76 19-98 146-222 (272)
197 2bm8_A Cephalosporin hydroxyla 97.0 8.8E-05 3E-09 65.7 -0.0 55 40-96 129-188 (236)
198 1u2z_A Histone-lysine N-methyl 97.0 0.0009 3.1E-08 65.0 6.8 70 28-97 285-361 (433)
199 3bzb_A Uncharacterized protein 97.0 0.0012 4E-08 59.8 6.8 106 18-125 104-234 (281)
200 2yxl_A PH0851 protein, 450AA l 97.0 0.0017 5.8E-08 62.9 8.1 81 18-98 286-392 (450)
201 3tr6_A O-methyltransferase; ce 96.9 0.00015 5.1E-09 62.5 0.4 78 17-97 90-176 (225)
202 2h00_A Methyltransferase 10 do 96.9 0.00014 4.7E-09 64.2 0.0 118 7-125 66-235 (254)
203 3duw_A OMT, O-methyltransferas 96.9 0.00034 1.2E-08 60.2 2.1 79 17-97 84-169 (223)
204 3ajd_A Putative methyltransfer 96.9 0.00043 1.5E-08 62.4 2.7 80 18-97 110-213 (274)
205 3hp7_A Hemolysin, putative; st 96.8 0.00037 1.3E-08 64.3 2.2 101 18-124 110-228 (291)
206 2igt_A SAM dependent methyltra 96.8 0.00074 2.5E-08 63.1 4.2 103 18-121 177-297 (332)
207 3tm4_A TRNA (guanine N2-)-meth 96.8 0.0014 5E-08 61.8 6.3 96 18-125 243-349 (373)
208 1m6e_X S-adenosyl-L-methionnin 96.8 0.0025 8.7E-08 60.4 7.9 78 48-125 128-246 (359)
209 3b5i_A S-adenosyl-L-methionine 96.8 0.00096 3.3E-08 63.6 4.9 53 48-100 139-230 (374)
210 3b3j_A Histone-arginine methyl 96.8 0.00049 1.7E-08 67.5 2.9 73 19-93 184-261 (480)
211 1sui_A Caffeoyl-COA O-methyltr 96.8 0.00042 1.4E-08 61.7 2.2 78 17-96 105-191 (247)
212 2efj_A 3,7-dimethylxanthine me 96.8 0.00088 3E-08 64.1 4.5 76 49-124 139-257 (384)
213 2nyu_A Putative ribosomal RNA 96.7 0.0018 6.1E-08 54.2 5.2 58 41-98 70-148 (196)
214 2f8l_A Hypothetical protein LM 96.7 0.0026 8.8E-08 59.1 6.5 98 21-122 164-280 (344)
215 3cbg_A O-methyltransferase; cy 96.7 0.00072 2.4E-08 59.2 2.6 78 18-97 99-184 (232)
216 1mjf_A Spermidine synthase; sp 96.7 0.00063 2.1E-08 61.7 2.2 89 6-95 75-193 (281)
217 2cmg_A Spermidine synthase; tr 96.6 0.0008 2.8E-08 60.7 2.6 84 6-96 72-172 (262)
218 3r3h_A O-methyltransferase, SA 96.6 9.5E-05 3.2E-09 65.7 -3.6 77 19-97 88-172 (242)
219 4hc4_A Protein arginine N-meth 96.5 0.0022 7.6E-08 61.1 5.3 85 6-92 83-186 (376)
220 3opn_A Putative hemolysin; str 96.5 0.00014 4.8E-09 64.5 -3.0 100 18-124 62-180 (232)
221 1nv8_A HEMK protein; class I a 96.5 0.0032 1.1E-07 57.3 6.0 76 18-95 148-249 (284)
222 2frx_A Hypothetical protein YE 96.5 0.0031 1.1E-07 61.8 6.1 80 18-97 144-248 (479)
223 2avd_A Catechol-O-methyltransf 96.4 0.00078 2.7E-08 58.1 1.1 78 18-97 96-181 (229)
224 3lec_A NADB-rossmann superfami 96.4 0.0081 2.8E-07 53.5 7.7 114 3-126 18-147 (230)
225 1sqg_A SUN protein, FMU protei 96.4 0.0015 5.2E-08 62.7 3.1 79 19-97 273-376 (429)
226 2oxt_A Nucleoside-2'-O-methylt 96.4 0.007 2.4E-07 54.6 7.3 53 42-97 123-187 (265)
227 2wa2_A Non-structural protein 96.3 0.0066 2.3E-07 55.1 7.0 53 42-97 131-195 (276)
228 4azs_A Methyltransferase WBDD; 96.3 0.00047 1.6E-08 68.8 -0.8 83 15-97 87-175 (569)
229 1wy7_A Hypothetical protein PH 96.3 0.016 5.3E-07 48.9 8.8 92 19-122 75-169 (207)
230 2hnk_A SAM-dependent O-methylt 96.3 0.0011 3.9E-08 57.9 1.6 76 19-96 88-182 (239)
231 3c3y_A Pfomt, O-methyltransfer 96.3 0.0012 4.2E-08 58.0 1.7 77 18-96 97-182 (237)
232 1ne2_A Hypothetical protein TA 96.2 0.0038 1.3E-07 52.7 4.1 66 19-93 77-145 (200)
233 3c0k_A UPF0064 protein YCCW; P 96.1 0.0056 1.9E-07 58.0 5.3 101 18-120 245-362 (396)
234 2as0_A Hypothetical protein PH 96.0 0.0051 1.7E-07 58.2 4.8 81 18-98 242-338 (396)
235 3m6w_A RRNA methylase; rRNA me 96.0 0.0017 6E-08 63.5 1.6 80 18-97 128-231 (464)
236 3m4x_A NOL1/NOP2/SUN family pr 96.0 0.0049 1.7E-07 60.2 4.6 100 19-122 133-257 (456)
237 1wxx_A TT1595, hypothetical pr 96.0 0.0069 2.4E-07 57.1 5.4 80 19-98 234-328 (382)
238 1zq9_A Probable dimethyladenos 95.9 0.0022 7.7E-08 58.2 1.8 85 6-92 28-144 (285)
239 2p41_A Type II methyltransfera 95.9 0.0087 3E-07 55.1 5.4 56 41-98 131-194 (305)
240 3gnl_A Uncharacterized protein 95.9 0.017 5.7E-07 51.9 7.1 114 3-126 18-147 (244)
241 2b78_A Hypothetical protein SM 95.8 0.0035 1.2E-07 59.5 2.7 102 18-121 237-355 (385)
242 3v97_A Ribosomal RNA large sub 95.8 0.0029 9.8E-08 64.9 2.0 95 19-121 565-675 (703)
243 2yx1_A Hypothetical protein MJ 95.8 0.0058 2E-07 56.8 4.0 75 18-98 218-294 (336)
244 4dmg_A Putative uncharacterize 95.7 0.0093 3.2E-07 57.0 5.0 92 6-97 214-328 (393)
245 3dou_A Ribosomal RNA large sub 95.6 0.011 3.7E-07 50.4 4.7 58 41-98 62-142 (191)
246 3frh_A 16S rRNA methylase; met 95.6 0.0097 3.3E-07 53.7 4.4 77 17-95 127-206 (253)
247 3k6r_A Putative transferase PH 95.6 0.022 7.5E-07 52.0 6.8 113 4-121 123-250 (278)
248 3kr9_A SAM-dependent methyltra 95.4 0.024 8.1E-07 50.2 6.2 113 3-126 12-141 (225)
249 1uwv_A 23S rRNA (uracil-5-)-me 95.3 0.042 1.4E-06 52.8 8.2 107 7-124 287-410 (433)
250 2qy6_A UPF0209 protein YFCK; s 95.3 0.0089 3E-07 53.9 3.1 72 41-123 150-230 (257)
251 2okc_A Type I restriction enzy 94.8 0.033 1.1E-06 53.5 5.9 76 21-97 213-309 (445)
252 2jjq_A Uncharacterized RNA met 94.8 0.041 1.4E-06 53.0 6.5 74 18-95 314-387 (425)
253 3ldg_A Putative uncharacterize 94.6 0.064 2.2E-06 51.0 7.3 79 18-97 258-345 (384)
254 3k0b_A Predicted N6-adenine-sp 94.5 0.052 1.8E-06 51.7 6.2 79 18-97 265-352 (393)
255 2qfm_A Spermine synthase; sper 94.4 0.019 6.6E-07 54.5 3.0 92 6-97 188-316 (364)
256 3lcv_B Sisomicin-gentamicin re 94.3 0.075 2.6E-06 48.5 6.6 101 18-120 158-264 (281)
257 3ldu_A Putative methylase; str 94.0 0.068 2.3E-06 50.7 5.9 80 17-97 258-346 (385)
258 3o4f_A Spermidine synthase; am 93.1 0.16 5.5E-06 46.7 6.6 89 8-96 85-199 (294)
259 2h1r_A Dimethyladenosine trans 92.8 0.057 2E-06 49.2 3.1 53 18-72 66-119 (299)
260 2zig_A TTHA0409, putative modi 92.7 0.047 1.6E-06 49.6 2.4 85 40-124 19-132 (297)
261 2ih2_A Modification methylase 92.0 0.39 1.4E-05 44.8 7.9 79 41-123 81-189 (421)
262 3evf_A RNA-directed RNA polyme 91.7 0.4 1.4E-05 43.7 7.3 56 42-97 123-186 (277)
263 1yub_A Ermam, rRNA methyltrans 90.7 0.0036 1.2E-07 55.2 -7.3 88 5-94 28-144 (245)
264 3v97_A Ribosomal RNA large sub 90.6 0.32 1.1E-05 49.7 6.2 79 18-96 258-348 (703)
265 2ar0_A M.ecoki, type I restric 90.3 0.2 6.8E-06 49.6 4.2 100 20-121 215-336 (541)
266 3cvo_A Methyltransferase-like 90.1 0.42 1.4E-05 41.4 5.7 74 18-95 53-154 (202)
267 1boo_A Protein (N-4 cytosine-s 89.5 0.25 8.7E-06 45.4 4.0 83 41-123 13-115 (323)
268 2dul_A N(2),N(2)-dimethylguano 89.1 0.14 4.8E-06 48.5 1.9 74 19-95 74-164 (378)
269 2b9e_A NOL1/NOP2/SUN domain fa 88.2 0.69 2.4E-05 42.4 5.9 78 18-96 129-235 (309)
270 3gru_A Dimethyladenosine trans 88.0 0.39 1.3E-05 43.9 4.1 65 6-71 50-126 (295)
271 3vyw_A MNMC2; tRNA wobble urid 86.9 0.51 1.7E-05 43.6 4.2 72 42-124 167-244 (308)
272 3khk_A Type I restriction-modi 86.6 0.64 2.2E-05 46.1 5.0 100 22-122 289-421 (544)
273 1qam_A ERMC' methyltransferase 86.3 0.28 9.5E-06 43.1 2.0 82 6-91 30-124 (244)
274 3bt7_A TRNA (uracil-5-)-methyl 86.2 0.46 1.6E-05 44.3 3.6 74 18-96 237-327 (369)
275 3axs_A Probable N(2),N(2)-dime 85.8 0.37 1.2E-05 46.0 2.7 73 20-95 81-158 (392)
276 1g60_A Adenine-specific methyl 84.7 1.7 5.9E-05 38.3 6.4 60 56-123 20-94 (260)
277 3lkd_A Type I restriction-modi 80.0 5.7 0.0002 39.2 8.7 100 21-122 253-383 (542)
278 2wk1_A NOVP; transferase, O-me 78.4 2 6.8E-05 39.0 4.5 68 28-96 173-245 (282)
279 4gqb_A Protein arginine N-meth 74.9 4.2 0.00014 41.2 6.1 63 28-92 396-464 (637)
280 1eg2_A Modification methylase 73.9 2.2 7.4E-05 39.2 3.5 54 43-96 39-107 (319)
281 2vz8_A Fatty acid synthase; tr 72.4 1.7 5.7E-05 50.6 2.8 41 56-96 1308-1349(2512)
282 2r6z_A UPF0341 protein in RSP 70.6 1.1 3.9E-05 39.7 0.8 63 25-87 121-189 (258)
283 3ua3_A Protein arginine N-meth 68.1 5.4 0.00018 41.0 5.1 53 40-92 471-531 (745)
284 2oyr_A UPF0341 protein YHIQ; a 67.2 1 3.5E-05 40.3 -0.3 49 41-89 145-194 (258)
285 3fut_A Dimethyladenosine trans 65.2 2 6.8E-05 38.6 1.2 52 18-71 70-122 (271)
286 3gcz_A Polyprotein; flavivirus 62.4 9.6 0.00033 34.6 5.2 56 42-97 139-203 (282)
287 3tqs_A Ribosomal RNA small sub 62.3 2 7E-05 38.1 0.7 62 6-69 29-106 (255)
288 3eld_A Methyltransferase; flav 57.9 28 0.00097 31.8 7.5 54 44-97 132-193 (300)
289 1m6y_A S-adenosyl-methyltransf 56.2 2.6 8.8E-05 38.5 0.2 51 17-67 51-106 (301)
290 4auk_A Ribosomal RNA large sub 56.1 32 0.0011 32.4 7.8 79 40-121 251-333 (375)
291 4fzv_A Putative methyltransfer 56.0 13 0.00045 34.7 5.1 55 41-95 204-284 (359)
292 2hwk_A Helicase NSP2; rossman 52.3 24 0.00082 32.4 6.0 61 58-124 205-277 (320)
293 2px2_A Genome polyprotein [con 50.2 64 0.0022 29.0 8.4 52 44-97 125-185 (269)
294 3c6k_A Spermine synthase; sper 46.5 15 0.00052 34.7 3.9 89 7-95 206-331 (381)
295 3ps9_A TRNA 5-methylaminomethy 41.4 15 0.0005 36.6 3.1 69 43-122 158-235 (676)
296 3r24_A NSP16, 2'-O-methyl tran 41.0 32 0.0011 31.8 5.0 54 44-98 155-220 (344)
297 3ll7_A Putative methyltransfer 41.0 4.2 0.00014 38.9 -0.9 89 7-95 94-209 (410)
298 3trk_A Nonstructural polyprote 39.4 11 0.00036 34.4 1.5 46 53-98 205-262 (324)
299 3u8e_A Papain-like cysteine pr 39.3 8.7 0.0003 33.0 0.9 9 234-242 19-28 (222)
300 2wbf_X Serine-repeat antigen p 38.9 7.3 0.00025 34.3 0.3 7 234-240 28-34 (265)
301 3tos_A CALS11; methyltransfera 38.3 19 0.00066 32.0 3.1 57 40-97 157-219 (257)
302 3i06_A Cruzipain; autocatalyti 38.2 7.6 0.00026 33.2 0.3 7 234-240 19-25 (215)
303 8pch_A Cathepsin H; hydrolase, 37.3 7.9 0.00027 33.1 0.3 9 234-242 20-29 (220)
304 3kwz_A Cathepsin K; enzyme inh 37.2 7.8 0.00027 33.0 0.3 7 234-240 19-25 (215)
305 1o0e_A Ervatamin C; plant cyst 37.2 7.9 0.00027 33.0 0.3 7 234-240 19-25 (208)
306 3tnx_A Papain; hydrolase, cyto 37.1 7.9 0.00027 36.3 0.3 9 234-242 170-179 (363)
307 2xu3_A Cathepsin L1; hydrolase 37.0 8 0.00027 33.1 0.3 7 234-240 19-25 (220)
308 3ovx_A Cathepsin S; hydrolase, 36.9 8.1 0.00028 33.0 0.3 7 234-240 20-26 (218)
309 3ioq_A CMS1MS2; caricaceae, cy 36.7 8.1 0.00028 33.0 0.3 7 234-240 19-25 (213)
310 3qj3_A Cathepsin L-like protei 36.6 8.2 0.00028 35.6 0.3 7 234-240 134-140 (331)
311 4gua_A Non-structural polyprot 36.5 21 0.00073 35.7 3.2 44 53-97 216-271 (670)
312 2cio_A Papain; hydrolase/inhib 36.4 8.3 0.00028 32.9 0.3 7 234-240 19-25 (212)
313 3pvc_A TRNA 5-methylaminomethy 36.1 27 0.00093 34.8 4.1 70 42-122 149-227 (689)
314 3pbh_A Procathepsin B; thiol p 36.0 8.6 0.00029 35.2 0.3 7 234-240 86-92 (317)
315 3p5u_A Actinidin; SAD, cystein 35.9 8.5 0.00029 33.0 0.3 7 234-240 19-25 (220)
316 1m6d_A Cathepsin F, catsf; pap 35.9 8.5 0.00029 32.9 0.3 7 234-240 19-25 (214)
317 1iwd_A Ervatamin B; cysteine p 35.8 8.6 0.00029 32.9 0.3 7 234-240 19-25 (215)
318 1ppo_A Protease omega; hydrola 35.8 8.6 0.00029 32.9 0.3 7 234-240 19-25 (216)
319 1by8_A Protein (procathepsin K 35.7 8.8 0.0003 35.1 0.4 7 234-240 118-124 (314)
320 2zki_A 199AA long hypothetical 35.4 1.7E+02 0.0059 23.4 8.5 66 59-124 70-143 (199)
321 1cs8_A Human procathepsin L; p 35.4 8.9 0.00031 35.0 0.4 7 234-240 115-121 (316)
322 3cbj_A Cathepsin B; cathepsin 35.1 8.9 0.0003 33.9 0.3 7 234-240 29-35 (266)
323 2oul_A Falcipain 2; cysteine p 35.1 8.9 0.0003 33.5 0.3 7 234-240 36-42 (241)
324 3f5v_A DER P 1 allergen; aller 35.1 8.9 0.00031 32.8 0.3 7 234-240 28-34 (222)
325 1cqd_A Protein (protease II); 35.0 8.9 0.0003 33.0 0.3 7 234-240 21-27 (221)
326 1pci_A Procaricain; zymogen, h 34.8 9.1 0.00031 35.1 0.3 7 234-240 125-131 (322)
327 2o6x_A Procathepsin L1, secret 34.8 9.2 0.00031 34.9 0.3 7 234-240 110-116 (310)
328 3qt4_A Cathepsin-L-like midgut 34.8 9.1 0.00031 35.3 0.3 7 234-240 133-139 (329)
329 2bdz_A Mexicain; cysteine prot 34.8 9.1 0.00031 32.8 0.3 7 234-240 19-25 (214)
330 1yal_A Chymopapain; hydrolase, 34.7 9.1 0.00031 32.8 0.3 7 234-240 19-25 (218)
331 2c0y_A Procathepsin S; proenzy 34.4 9.3 0.00032 34.9 0.3 7 234-240 117-123 (315)
332 3bwk_A Cysteine protease falci 34.4 9.4 0.00032 33.3 0.3 7 234-240 38-44 (243)
333 1xkg_A DER P I, major mite fec 34.2 9.4 0.00032 34.9 0.3 7 234-240 108-114 (312)
334 1s4v_A Cysteine endopeptidase; 34.0 9.5 0.00033 33.0 0.3 7 234-240 20-26 (229)
335 3hhi_A Cathepsin B-like cystei 33.9 9.5 0.00033 35.1 0.3 7 234-240 94-100 (325)
336 2fo5_A Cysteine proteinase EP- 33.7 9.8 0.00033 33.9 0.3 7 234-240 22-28 (262)
337 2b1m_A SPE31; papain-like, sug 33.6 9.9 0.00034 33.3 0.3 7 234-240 20-26 (246)
338 3f75_A Toxopain-2, cathepsin L 33.5 10 0.00034 32.5 0.4 7 234-240 25-31 (224)
339 3ois_A Cysteine protease; alph 33.5 9.9 0.00034 34.1 0.3 9 234-242 72-81 (291)
340 3ny7_A YCHM protein, sulfate t 33.3 84 0.0029 23.6 5.7 51 62-123 49-101 (118)
341 3rht_A (gatase1)-like protein; 32.9 89 0.0031 27.6 6.6 37 58-95 49-86 (259)
342 3cdw_H Protein 3B, VPG; RNA-de 32.5 23 0.00078 20.5 1.6 20 248-267 2-21 (26)
343 3qsd_A Cathepsin B-like peptid 32.1 11 0.00037 33.1 0.3 7 234-240 25-31 (254)
344 3f6r_A Flavodoxin; FMN binding 30.8 1.8E+02 0.006 22.2 9.7 110 9-124 3-121 (148)
345 3pdf_A Cathepsin C, dipeptidyl 30.3 12 0.0004 36.1 0.3 7 234-240 228-234 (441)
346 4gi5_A Quinone reductase; prot 30.2 2E+02 0.007 25.5 8.5 44 76-122 102-145 (280)
347 3nbm_A PTS system, lactose-spe 29.7 1.8E+02 0.0062 22.0 7.9 74 9-92 8-81 (108)
348 1ydg_A Trp repressor binding p 26.9 2.3E+02 0.0078 23.0 7.9 65 59-124 78-151 (211)
349 1wg8_A Predicted S-adenosylmet 26.5 30 0.001 31.4 2.2 24 74-97 212-235 (285)
350 3tka_A Ribosomal RNA small sub 25.7 31 0.0011 32.2 2.2 24 74-97 253-276 (347)
351 3uzu_A Ribosomal RNA small sub 25.1 18 0.00063 32.2 0.6 47 19-68 71-123 (279)
352 3s1s_A Restriction endonucleas 24.0 85 0.0029 32.8 5.3 54 44-97 383-467 (878)
353 1qyr_A KSGA, high level kasuga 22.5 12 0.0004 33.0 -1.3 50 19-69 46-100 (252)
354 3pw3_A Aminopeptidase C; bleom 21.7 21 0.00072 33.7 0.3 7 234-240 28-34 (383)
355 3ftd_A Dimethyladenosine trans 21.6 73 0.0025 27.5 3.8 63 17-84 55-118 (249)
356 1gl0_I Protease inhibitor LCMI 21.6 25 0.00084 21.9 0.4 18 195-212 2-20 (35)
357 1lrv_A LRV, leucine-rich repea 21.5 25 0.00087 30.8 0.7 25 242-266 12-37 (244)
358 3ufb_A Type I restriction-modi 20.8 3.4E+02 0.012 26.1 8.8 77 44-122 283-387 (530)
359 3tvj_I Protease inhibitor SGPI 20.6 22 0.00074 22.5 0.1 19 195-213 5-24 (38)
360 1e2b_A Enzyme IIB-cellobiose; 20.3 1.6E+02 0.0054 22.1 5.0 54 9-67 5-58 (106)
No 1
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.72 E-value=4.3e-17 Score=137.87 Aligned_cols=146 Identities=22% Similarity=0.319 Sum_probs=109.5
Q ss_pred cccCceEEEeecCCccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCC---CCCcccEEEeccccCCC-C-hHHHH
Q 022411 4 GKMQSAVLALSEDKILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPV---ESFSIDTVLSISSSHEL-P-GDQLL 78 (297)
Q Consensus 4 ~~~~~~VLll~~~~~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~---~d~sfD~Vls~~~~~~~-~-~~~~L 78 (297)
++.|++||.|+.+.+. .|+++.|++.|+++... ++.+++++++.+++ ++++||+|++..++||+ + ...++
T Consensus 10 ~~~g~~vL~~~~g~v~--vD~s~~ml~~a~~~~~~---~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~l 84 (176)
T 2ld4_A 10 ISAGQFVAVVWDKSSP--VEALKGLVDKLQALTGN---EGRVSVENIKQLLQSAHKESSFDIILSGLVPGSTTLHSAEIL 84 (176)
T ss_dssp CCTTSEEEEEECTTSC--HHHHHHHHHHHHHHTTT---TSEEEEEEGGGGGGGCCCSSCEEEEEECCSTTCCCCCCHHHH
T ss_pred CCCCCEEEEecCCcee--eeCCHHHHHHHHHhccc---CcEEEEechhcCccccCCCCCEeEEEECChhhhcccCHHHHH
Confidence 4678999999998865 99999999999876532 48999999999988 89999999999999998 5 78999
Q ss_pred HHHHhcccCCcEEEEEecCCCCcc--chHHHHHHHHHHHHHCCcccccchhccccCc--------------cceeEeeee
Q 022411 79 EEISRVLKPGGTILIYKKLTSDKG--DVDKAISALEGKLLLAGFLDAQRIQLKSVVP--------------AEVVSFGVK 142 (297)
Q Consensus 79 ~ei~RvLKPGG~l~i~~~~~~~~g--~~~~~~~~l~~~L~laGFv~v~~~~~kp~~~--------------~~~~~~~i~ 142 (297)
++++|+|||||+|++..+.....+ ......+++...|..+||+++.....-|..+ +.+..+.+.
T Consensus 85 ~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGfi~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 164 (176)
T 2ld4_A 85 AEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGLVEVKELQREPLTPEEVQSVREHLGHESDNLLFVQIT 164 (176)
T ss_dssp HHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTCEEEEEEEEECCCHHHHHHHHHHTCCCCSSEEEEEEE
T ss_pred HHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCCcEeecCcccCCCHHHHHHHHHHhcccCCceEEEEEe
Confidence 999999999999999765321111 0111234788899999995433221111111 122356789
Q ss_pred ecCCCCCCCCcc
Q 022411 143 GKKPTWKIGSSF 154 (297)
Q Consensus 143 akKP~~~~gs~~ 154 (297)
++||+|++|||+
T Consensus 165 a~Kp~~~~gs~~ 176 (176)
T 2ld4_A 165 GKKPNFEVGSSR 176 (176)
T ss_dssp EECCCSSCCSCC
T ss_pred ccCCcccccCCC
Confidence 999999999984
No 2
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.20 E-value=5.2e-11 Score=108.27 Aligned_cols=93 Identities=15% Similarity=0.189 Sum_probs=75.6
Q ss_pred cccCceEEEeecCCc----------------cChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCCCCCCCcccEEEe
Q 022411 4 GKMQSAVLALSEDKI----------------LPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLS 65 (297)
Q Consensus 4 ~~~~~~VLll~~~~~----------------vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~Lp~~d~sfD~Vls 65 (297)
++.|.+||-|--|+. ++..|+++.|++.|+++++.. ..+++++++|+..+|++ .||+|++
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~--~~d~v~~ 145 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIE--NASMVVL 145 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCC--SEEEEEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccccc--cccccee
Confidence 456778888755443 445688999999999887553 45799999999998865 5999999
Q ss_pred ccccCCCCh---HHHHHHHHhcccCCcEEEEEecCC
Q 022411 66 ISSSHELPG---DQLLEEISRVLKPGGTILIYKKLT 98 (297)
Q Consensus 66 ~~~~~~~~~---~~~L~ei~RvLKPGG~l~i~~~~~ 98 (297)
++++|++++ ..+|++++|+|||||+|++.+...
T Consensus 146 ~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~ 181 (261)
T 4gek_A 146 NFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFS 181 (261)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred eeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccC
Confidence 999999983 468999999999999999988653
No 3
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.03 E-value=3.1e-10 Score=101.14 Aligned_cols=119 Identities=20% Similarity=0.235 Sum_probs=87.9
Q ss_pred cCceEEEeecCC------------ccChHHHHHHHHHHHHHHhhhc-CCCeEEEEccCCCCCCCCCcccEEEeccccCCC
Q 022411 6 MQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVESFSIDTVLSISSSHEL 72 (297)
Q Consensus 6 ~~~~VLll~~~~------------~vt~~dlse~m~~~A~~~~~~~-~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~ 72 (297)
.+.+||-|--|+ .++..|+++.|++.|+++.... ..++.++.+|++.+|+++++||+|++..++||+
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~fD~V~~~~~l~~~ 116 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHIVTCRIAAHHF 116 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEEEEEESCGGGC
T ss_pred CCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCEEEEEEhhhhHhc
Confidence 456777775544 2345577899999998876543 457999999999999999999999999999999
Q ss_pred C-hHHHHHHHHhcccCCcEEEEEecCCCCccchHH-----------------HHHHHHHHHHHCCccccc
Q 022411 73 P-GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDK-----------------AISALEGKLLLAGFLDAQ 124 (297)
Q Consensus 73 ~-~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~-----------------~~~~l~~~L~laGFv~v~ 124 (297)
+ +..++.+++|+|||||+|++.++.......... ....+...|..+||..+.
T Consensus 117 ~d~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 186 (260)
T 1vl5_A 117 PNPASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNYVEKERDYSHHRAWKKSDWLKMLEEAGFELEE 186 (260)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHHTCEEEE
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHHHHHHhcCccccCCCCHHHHHHHHHHCCCeEEE
Confidence 8 789999999999999999998654221110000 123566677888887654
No 4
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.99 E-value=8.5e-10 Score=95.34 Aligned_cols=123 Identities=20% Similarity=0.192 Sum_probs=91.5
Q ss_pred cChHHHHHHHHHHHHHHhhhc-CCCeEEEEccCCCCCCCCCcccEEEeccccCCCC-hHHHHHHHHhcccCCcEEEEEec
Q 022411 19 LPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVESFSIDTVLSISSSHELP-GDQLLEEISRVLKPGGTILIYKK 96 (297)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~-~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~-~~~~L~ei~RvLKPGG~l~i~~~ 96 (297)
++..|+++.|++.++++.... ..++.+..+++..+++++++||+|++...+++++ ...++++++|+|||||++++.++
T Consensus 65 v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 144 (219)
T 3dh0_A 65 VYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDW 144 (219)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEe
Confidence 445567788999998876543 3579999999999999999999999999999887 78999999999999999999986
Q ss_pred CCCCc--cc-hH--HHHHHHHHHHHHCCcccccchhccccCccceeEeeeeecCCC
Q 022411 97 LTSDK--GD-VD--KAISALEGKLLLAGFLDAQRIQLKSVVPAEVVSFGVKGKKPT 147 (297)
Q Consensus 97 ~~~~~--g~-~~--~~~~~l~~~L~laGFv~v~~~~~kp~~~~~~~~~~i~akKP~ 147 (297)
..... +. .. ...+++...+..+||..+......+. .+.+.++||.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~------~~~~~~~k~~ 194 (219)
T 3dh0_A 145 KKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVEVGKY------CFGVYAMIVK 194 (219)
T ss_dssp CSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEEETTT------EEEEEEECC-
T ss_pred cccccccCCchhcccCHHHHHHHHHHCCCEEEEEEeeCCc------eEEEEEEecc
Confidence 53321 11 00 12357888899999998765442221 3455666653
No 5
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.98 E-value=1.4e-09 Score=93.12 Aligned_cols=108 Identities=17% Similarity=0.229 Sum_probs=83.8
Q ss_pred cChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCCCCCCCcccEEEeccccCCCC-hHHHHHHHHhcccCCcEEEEEe
Q 022411 19 LPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSHELP-GDQLLEEISRVLKPGGTILIYK 95 (297)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~-~~~~L~ei~RvLKPGG~l~i~~ 95 (297)
++..|+++.|++.|++++... ..++.++.+++..+|+++++||+|++..+++|++ ...++++++|+|||||++++.+
T Consensus 69 v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 69 IRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEe
Confidence 345577788999998876543 3579999999999999999999999999999887 7899999999999999999986
Q ss_pred cCCCCc-------------cch---------HHHHHHHHHHHHHCCcccccch
Q 022411 96 KLTSDK-------------GDV---------DKAISALEGKLLLAGFLDAQRI 126 (297)
Q Consensus 96 ~~~~~~-------------g~~---------~~~~~~l~~~L~laGFv~v~~~ 126 (297)
...... ..+ ....+.+...|..+||..++..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~ 201 (219)
T 3dlc_A 149 GFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIGISSYEII 201 (219)
T ss_dssp CCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHTCSSEEEE
T ss_pred ccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcCCCeEEEE
Confidence 542210 000 0123567788999999887654
No 6
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.96 E-value=1.3e-09 Score=95.21 Aligned_cols=79 Identities=16% Similarity=0.198 Sum_probs=66.3
Q ss_pred ccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEeccccCCCC-hH--HHHHHHHhcccCCcEEEEE
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP-GD--QLLEEISRVLKPGGTILIY 94 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~-~~--~~L~ei~RvLKPGG~l~i~ 94 (297)
.++..|+++.|++.|+++..... ++.++.+++..++++ ++||+|++..++++++ .. .++++++|+|||||+|++.
T Consensus 70 ~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 147 (234)
T 3dtn_A 70 TFTLVDMSEKMLEIAKNRFRGNL-KVKYIEADYSKYDFE-EKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINA 147 (234)
T ss_dssp EEEEEESCHHHHHHHHHHTCSCT-TEEEEESCTTTCCCC-SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEEECCHHHHHHHHHhhccCC-CEEEEeCchhccCCC-CCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 44456778899999987754433 899999999999988 8999999999999998 33 5899999999999999999
Q ss_pred ecCC
Q 022411 95 KKLT 98 (297)
Q Consensus 95 ~~~~ 98 (297)
++..
T Consensus 148 ~~~~ 151 (234)
T 3dtn_A 148 DLVH 151 (234)
T ss_dssp EECB
T ss_pred EecC
Confidence 8653
No 7
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.92 E-value=6.1e-10 Score=101.08 Aligned_cols=75 Identities=15% Similarity=0.147 Sum_probs=65.3
Q ss_pred cChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEeccccCCCChHHHHHHHHhcccCCcEEEEEecCC
Q 022411 19 LPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKLT 98 (297)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i~~~~~ 98 (297)
|+..|+++.|++.|+ ..+++.+++++++++|+++++||+|++..++||++...+++|++|+|||||+|.+.....
T Consensus 64 v~gvD~s~~ml~~a~-----~~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~~~~~~~~~e~~rvLkpgG~l~~~~~~~ 138 (257)
T 4hg2_A 64 VHAVDPGEAQIRQAL-----RHPRVTYAVAPAEDTGLPPASVDVAIAAQAMHWFDLDRFWAELRRVARPGAVFAAVTYGL 138 (257)
T ss_dssp EEEEESCHHHHHTCC-----CCTTEEEEECCTTCCCCCSSCEEEEEECSCCTTCCHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred EEEEeCcHHhhhhhh-----hcCCceeehhhhhhhcccCCcccEEEEeeehhHhhHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 344577888887653 256899999999999999999999999999999998889999999999999999887654
No 8
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.90 E-value=1.7e-09 Score=95.65 Aligned_cols=120 Identities=13% Similarity=0.096 Sum_probs=89.0
Q ss_pred ccCceEEEeecCC-------------ccChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCCCCCCCcccEEEecccc
Q 022411 5 KMQSAVLALSEDK-------------ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSS 69 (297)
Q Consensus 5 ~~~~~VLll~~~~-------------~vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~ 69 (297)
+.+.+||-|--|+ .++..|+++.|++.|++++... ..++.++.+++..+++ +++||+|++..++
T Consensus 35 ~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~V~~~~~~ 113 (256)
T 1nkv_A 35 KPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-NEKCDVAACVGAT 113 (256)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-SSCEEEEEEESCG
T ss_pred CCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-CCCCCEEEECCCh
Confidence 3456777775443 3445577889999998876543 3579999999999988 8899999999988
Q ss_pred CCCC-hHHHHHHHHhcccCCcEEEEEecCCCCccchH--------------HHHHHHHHHHHHCCcccccc
Q 022411 70 HELP-GDQLLEEISRVLKPGGTILIYKKLTSDKGDVD--------------KAISALEGKLLLAGFLDAQR 125 (297)
Q Consensus 70 ~~~~-~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~--------------~~~~~l~~~L~laGFv~v~~ 125 (297)
++++ ...++++++|+|||||+|++.++......... .....+...|..+||..+..
T Consensus 114 ~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 184 (256)
T 1nkv_A 114 WIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPGLVGAFDDLGYDVVEM 184 (256)
T ss_dssp GGTSSSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHHHHHHHHHTTTBCCCEE
T ss_pred HhcCCHHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCCHHHHHHHHHHCCCeeEEE
Confidence 8887 78999999999999999999875321110000 01246778889999987653
No 9
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.90 E-value=3.7e-09 Score=93.45 Aligned_cols=121 Identities=16% Similarity=0.222 Sum_probs=91.2
Q ss_pred ccCceEEEeecCC-------------ccChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCCCCCCCcccEEEecccc
Q 022411 5 KMQSAVLALSEDK-------------ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSS 69 (297)
Q Consensus 5 ~~~~~VLll~~~~-------------~vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~ 69 (297)
+.+.+||-|--|+ .++..|+++.|++.|+++.... ..++.++.+|+..+|+++++||+|++..++
T Consensus 45 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 124 (257)
T 3f4k_A 45 TDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEGAI 124 (257)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEESCS
T ss_pred CCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecChH
Confidence 4456777775543 4445577888999998876543 345999999999999999999999999999
Q ss_pred CCCChHHHHHHHHhcccCCcEEEEEecC--CC-CccchHH----------HHHHHHHHHHHCCcccccc
Q 022411 70 HELPGDQLLEEISRVLKPGGTILIYKKL--TS-DKGDVDK----------AISALEGKLLLAGFLDAQR 125 (297)
Q Consensus 70 ~~~~~~~~L~ei~RvLKPGG~l~i~~~~--~~-~~g~~~~----------~~~~l~~~L~laGFv~v~~ 125 (297)
+++....+++++.|+|||||++++.++. .. ....... ....+...|..+||..+..
T Consensus 125 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~ 193 (257)
T 3f4k_A 125 YNIGFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTPTAH 193 (257)
T ss_dssp CCCCHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEEEE
T ss_pred hhcCHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEEEE
Confidence 9888888999999999999999999753 11 1111111 1246677889999988764
No 10
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.89 E-value=1.3e-09 Score=96.51 Aligned_cols=121 Identities=20% Similarity=0.251 Sum_probs=91.4
Q ss_pred ccCceEEEeecC-------------CccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEeccccCC
Q 022411 5 KMQSAVLALSED-------------KILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHE 71 (297)
Q Consensus 5 ~~~~~VLll~~~-------------~~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~ 71 (297)
+.+.+||-|--| ..++..|+++.|++.|+++.... .++.++.+|+..+|+++++||+|++..+++|
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 132 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN-NKIIFEANDILTKEFPENNFDLIYSRDAILA 132 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC-TTEEEEECCTTTCCCCTTCEEEEEEESCGGG
T ss_pred CCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC-CCeEEEECccccCCCCCCcEEEEeHHHHHHh
Confidence 345677776544 34455677889999988765443 7899999999999999999999999999999
Q ss_pred C--C-hHHHHHHHHhcccCCcEEEEEecCCCCccchHH--------------HHHHHHHHHHHCCcccccch
Q 022411 72 L--P-GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDK--------------AISALEGKLLLAGFLDAQRI 126 (297)
Q Consensus 72 ~--~-~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~--------------~~~~l~~~L~laGFv~v~~~ 126 (297)
+ . ...++++++|+|||||++++.++.......+.. ..+.+...+..+||..+...
T Consensus 133 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 204 (266)
T 3ujc_A 133 LSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNFKNVVSK 204 (266)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred cChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcCCeEEEEE
Confidence 9 4 688999999999999999999865332111110 13467788899999876543
No 11
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.89 E-value=4.9e-09 Score=92.51 Aligned_cols=121 Identities=14% Similarity=0.196 Sum_probs=89.6
Q ss_pred ccCceEEEeecCC------------ccChHHHHHHHHHHHHHHhhhc-CCCeEEEEccCCCCCCCCCcccEEEeccccCC
Q 022411 5 KMQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVESFSIDTVLSISSSHE 71 (297)
Q Consensus 5 ~~~~~VLll~~~~------------~vt~~dlse~m~~~A~~~~~~~-~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~ 71 (297)
+.+.+||-+--|+ .++..|+++.|++.++++.... ..++.++.++++.+|+++++||+|++...++|
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 99 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDIITCRYAAHH 99 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEEEEEESCGGG
T ss_pred CCCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEEEEEECCchhh
Confidence 3456777775544 3345577889999988876543 45799999999999999999999999998988
Q ss_pred CC-hHHHHHHHHhcccCCcEEEEEecCCCCccchH-----------------HHHHHHHHHHHHCCcccccc
Q 022411 72 LP-GDQLLEEISRVLKPGGTILIYKKLTSDKGDVD-----------------KAISALEGKLLLAGFLDAQR 125 (297)
Q Consensus 72 ~~-~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~-----------------~~~~~l~~~L~laGFv~v~~ 125 (297)
++ ...++.+++|+|||||++++.+.......... ....++...|..+||..+..
T Consensus 100 ~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~ 171 (239)
T 1xxl_A 100 FSDVRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVNHLNRLRDPSHVRESSLSEWQAMFSANQLAYQDI 171 (239)
T ss_dssp CSCHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHTTEEEEEE
T ss_pred ccCHHHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHHHHHHhccccccCCCCHHHHHHHHHHCCCcEEEE
Confidence 87 78999999999999999999876432111110 01245667778888886543
No 12
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=98.89 E-value=3.6e-10 Score=93.36 Aligned_cols=106 Identities=17% Similarity=0.251 Sum_probs=73.7
Q ss_pred CCccccCceEEEeecCCccChHHHHHHHHHHHHHH-hhhcCCCeEEE-EccCCCCCCCCCcccEEEeccccC-C-CC-hH
Q 022411 1 MDTGKMQSAVLALSEDKILPVSAVLNAIRDLGDEA-VEQCDPQIITQ-ASSLSQLPVESFSIDTVLSISSSH-E-LP-GD 75 (297)
Q Consensus 1 m~~~~~~~~VLll~~~~~vt~~dlse~m~~~A~~~-~~~~~~~v~~~-~~d~~~Lp~~d~sfD~Vls~~~~~-~-~~-~~ 75 (297)
|+..+ ++|||.||+++|.++.++.++....+. .......+..+ .....+|| +++||.|+.....- . .. +.
T Consensus 4 ~~~~~---~~LLL~~Psv~t~pe~le~~k~~~~~~~~~~~d~qmlDRLa~G~VsLp--~stYD~V~~lt~~~~~~~~l~r 78 (136)
T 2km1_A 4 MSQYK---TGLLLIHPAVTTTPELVENTKAQAASKKVKFVDQFLINKLNDGSITLE--NAKYETVHYLTPEAQTDIKFPK 78 (136)
T ss_dssp ---CE---EEEEEECHHHHTSHHHHHHHHHHHHHTTEEEEEEEEHHHHHHTCCCCC--SSSCCSEEEECCCSSCSCCCCH
T ss_pred cccCC---CeEEecCCcccCCHHHHHHHHHhhhccccchhhHHHHHHHhcCcccCC--cccccEEEEecCCccchhhcCH
Confidence 55555 899999999999999999999876652 00111122222 23445554 99999999887432 2 22 58
Q ss_pred HHHHHHHhcccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCccccc
Q 022411 76 QLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQ 124 (297)
Q Consensus 76 ~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~ 124 (297)
.+++.|++.|||||+|.- +.. ....++.++||+.++
T Consensus 79 ~li~~l~~aLkpgG~L~g----------l~~---~~~~EailaGfvv~~ 114 (136)
T 2km1_A 79 KLISVLADSLKPNGSLIG----------LSD---IYKVDALINGFEIIN 114 (136)
T ss_dssp HHHHHHHTTCCTTCCEEC----------CCH---HHHHHHHHHTEEEEC
T ss_pred HHHHHHHHHhCCCCEEEe----------cCc---chhhHHHhhccEecc
Confidence 999999999999999984 111 456789999999655
No 13
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.89 E-value=5.9e-09 Score=93.27 Aligned_cols=121 Identities=17% Similarity=0.212 Sum_probs=92.4
Q ss_pred ccCceEEEeecCC-------------ccChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCCCCCCCcccEEEecccc
Q 022411 5 KMQSAVLALSEDK-------------ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSS 69 (297)
Q Consensus 5 ~~~~~VLll~~~~-------------~vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~ 69 (297)
+.+.+||-|--|+ .++..|+++.|++.|+++.... ..++.++.+|+..+|+++++||+|++...+
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~ 124 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGAI 124 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSCG
T ss_pred CCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCCc
Confidence 4566777775543 4456688899999998876544 356999999999999999999999999999
Q ss_pred CCCChHHHHHHHHhcccCCcEEEEEecCCC---CccchHH----------HHHHHHHHHHHCCcccccc
Q 022411 70 HELPGDQLLEEISRVLKPGGTILIYKKLTS---DKGDVDK----------AISALEGKLLLAGFLDAQR 125 (297)
Q Consensus 70 ~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~---~~g~~~~----------~~~~l~~~L~laGFv~v~~ 125 (297)
+++....+++++.|+|||||++++.+..-. ....... ....+...+..+||..+..
T Consensus 125 ~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~ 193 (267)
T 3kkz_A 125 YNIGFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPVAT 193 (267)
T ss_dssp GGTCHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEEEE
T ss_pred eecCHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEE
Confidence 888888899999999999999999875411 1111111 1246777889999998754
No 14
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.87 E-value=1.7e-09 Score=95.71 Aligned_cols=77 Identities=13% Similarity=0.185 Sum_probs=67.3
Q ss_pred ccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEeccccCCCC-hHHHHHHHHhcccCCcEEEEEec
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP-GDQLLEEISRVLKPGGTILIYKK 96 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~-~~~~L~ei~RvLKPGG~l~i~~~ 96 (297)
.++..|+++.|++.|+++.. ..++.++.+++..+|+++++||+|++..++++++ ...++++++|+|||||+|++..+
T Consensus 69 ~v~~vD~s~~~~~~a~~~~~--~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 69 KVLGIDLSERMLTEAKRKTT--SPVVCYEQKAIEDIAIEPDAYNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp EEEEEESCHHHHHHHHHHCC--CTTEEEEECCGGGCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHhhc--cCCeEEEEcchhhCCCCCCCeEEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEEeC
Confidence 45566788899999887654 5689999999999999999999999999999987 78999999999999999999743
No 15
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.86 E-value=2.4e-09 Score=97.10 Aligned_cols=121 Identities=19% Similarity=0.251 Sum_probs=91.2
Q ss_pred ccCceEEEeecCC-------------ccChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCCCCCCCcccEEEecccc
Q 022411 5 KMQSAVLALSEDK-------------ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSS 69 (297)
Q Consensus 5 ~~~~~VLll~~~~-------------~vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~ 69 (297)
+.+.+||-+--|+ .++..|+++.|++.|+++.... ..++.++.+++..+|+++++||+|++..++
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 160 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDAF 160 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESCG
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecchh
Confidence 4566777775433 3445577788999998776443 357999999999999999999999999999
Q ss_pred CCCC-hHHHHHHHHhcccCCcEEEEEecCCCCc---cchHH-----------HHHHHHHHHHHCCcccccc
Q 022411 70 HELP-GDQLLEEISRVLKPGGTILIYKKLTSDK---GDVDK-----------AISALEGKLLLAGFLDAQR 125 (297)
Q Consensus 70 ~~~~-~~~~L~ei~RvLKPGG~l~i~~~~~~~~---g~~~~-----------~~~~l~~~L~laGFv~v~~ 125 (297)
+|++ ...++++++|+|||||+|++.++..... ..+.. ....+...|..+||..+..
T Consensus 161 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 231 (297)
T 2o57_A 161 LHSPDKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRSLAKECGLVTLRT 231 (297)
T ss_dssp GGCSCHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHHHHHHTTEEEEEE
T ss_pred hhcCCHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCCCCCCHHHHHHHHHHCCCeEEEE
Confidence 9888 7899999999999999999997643211 11111 1345677889999987654
No 16
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.85 E-value=5.9e-09 Score=90.03 Aligned_cols=103 Identities=19% Similarity=0.281 Sum_probs=78.7
Q ss_pred ccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEeccccCCCC-hHH--HHHHHHhcccCCcEEEEE
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP-GDQ--LLEEISRVLKPGGTILIY 94 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~-~~~--~L~ei~RvLKPGG~l~i~ 94 (297)
.++..|+++.|++.++++.. .++.++.+++..+|++ ++||+|++..++++++ ... +++++.|+|||||++++.
T Consensus 69 ~v~~vD~s~~~~~~a~~~~~---~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 144 (220)
T 3hnr_A 69 TVYGIEPSREMRMIAKEKLP---KEFSITEGDFLSFEVP-TSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFA 144 (220)
T ss_dssp EEEEECSCHHHHHHHHHHSC---TTCCEESCCSSSCCCC-SCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred eEEEEeCCHHHHHHHHHhCC---CceEEEeCChhhcCCC-CCeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEE
Confidence 34566778889998887643 5799999999999988 9999999999999998 544 999999999999999999
Q ss_pred ecCCCCccchH---------------H--------HHHHHHHHHHHCCccccc
Q 022411 95 KKLTSDKGDVD---------------K--------AISALEGKLLLAGFLDAQ 124 (297)
Q Consensus 95 ~~~~~~~g~~~---------------~--------~~~~l~~~L~laGFv~v~ 124 (297)
++......... . ..+.+...|..+||..+.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~ 197 (220)
T 3hnr_A 145 DTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTF 197 (220)
T ss_dssp EECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEE
T ss_pred eccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEE
Confidence 86532211110 0 124677788889996544
No 17
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.83 E-value=4.4e-09 Score=100.06 Aligned_cols=122 Identities=20% Similarity=0.212 Sum_probs=92.1
Q ss_pred ccCceEEEeecCCc---------------cChHHHHHHHHHHHHHHhhhc---------CCCeEEEEccCCCC------C
Q 022411 5 KMQSAVLALSEDKI---------------LPVSAVLNAIRDLGDEAVEQC---------DPQIITQASSLSQL------P 54 (297)
Q Consensus 5 ~~~~~VLll~~~~~---------------vt~~dlse~m~~~A~~~~~~~---------~~~v~~~~~d~~~L------p 54 (297)
..|.+||-|--|+. ++..|+++.|++.|+++++.. ..++.++.+++..+ |
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 45667887755443 345567788999998875432 26899999999988 9
Q ss_pred CCCCcccEEEeccccCCCC-hHHHHHHHHhcccCCcEEEEEecCCCCc-c-chH-------------HHHHHHHHHHHHC
Q 022411 55 VESFSIDTVLSISSSHELP-GDQLLEEISRVLKPGGTILIYKKLTSDK-G-DVD-------------KAISALEGKLLLA 118 (297)
Q Consensus 55 ~~d~sfD~Vls~~~~~~~~-~~~~L~ei~RvLKPGG~l~i~~~~~~~~-g-~~~-------------~~~~~l~~~L~la 118 (297)
+++++||+|+++.++++++ ...++++++|+|||||+|++.++..... . ... ...+++...|..+
T Consensus 162 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~a 241 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAEA 241 (383)
T ss_dssp CCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHHT
T ss_pred CCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHHC
Confidence 9999999999999999988 7899999999999999999987543211 0 000 0125788889999
Q ss_pred Ccccccch
Q 022411 119 GFLDAQRI 126 (297)
Q Consensus 119 GFv~v~~~ 126 (297)
||..+...
T Consensus 242 GF~~v~~~ 249 (383)
T 4fsd_A 242 GFRDVRLV 249 (383)
T ss_dssp TCCCEEEE
T ss_pred CCceEEEE
Confidence 99876543
No 18
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.83 E-value=3.4e-09 Score=94.68 Aligned_cols=120 Identities=21% Similarity=0.285 Sum_probs=89.5
Q ss_pred cCceEEEeecCC-------------ccChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCCCCCCCcccEEEeccccC
Q 022411 6 MQSAVLALSEDK-------------ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSH 70 (297)
Q Consensus 6 ~~~~VLll~~~~-------------~vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~ 70 (297)
.+.+||-+--|+ .++..|+++.|++.++++.... ..++.++.+++..+|+++++||+|++...++
T Consensus 61 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 140 (273)
T 3bus_A 61 SGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALESLH 140 (273)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEESCTT
T ss_pred CCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEechhh
Confidence 456777775443 3344566788999988876543 3479999999999999999999999999999
Q ss_pred CCC-hHHHHHHHHhcccCCcEEEEEecCCCC-ccch-----H-----------HHHHHHHHHHHHCCcccccc
Q 022411 71 ELP-GDQLLEEISRVLKPGGTILIYKKLTSD-KGDV-----D-----------KAISALEGKLLLAGFLDAQR 125 (297)
Q Consensus 71 ~~~-~~~~L~ei~RvLKPGG~l~i~~~~~~~-~g~~-----~-----------~~~~~l~~~L~laGFv~v~~ 125 (297)
|++ ...+++++.|+|||||++++.++.... .... . ...+.+...+..+||..+..
T Consensus 141 ~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 213 (273)
T 3bus_A 141 HMPDRGRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYESDVRQAELVVTST 213 (273)
T ss_dssp TSSCHHHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred hCCCHHHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHHhhcCccCCCCHHHHHHHHHHcCCeEEEE
Confidence 997 789999999999999999998865321 1110 0 01246677788899987654
No 19
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.83 E-value=4.4e-09 Score=96.38 Aligned_cols=108 Identities=19% Similarity=0.122 Sum_probs=82.6
Q ss_pred ccChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCCCCCCCcccEEEeccccCCCC-hH---HHHHHHHhcccCCcEE
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSHELP-GD---QLLEEISRVLKPGGTI 91 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~-~~---~~L~ei~RvLKPGG~l 91 (297)
.++..|+++.|++.|+++.... ..++.++.+|+..+|++ ++||+|+++..++|++ +. .++++++|+|||||+|
T Consensus 145 ~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 223 (305)
T 3ocj_A 145 QLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGAL 223 (305)
T ss_dssp EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEE
T ss_pred eEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEE
Confidence 4456688899999999876544 23599999999999988 9999999999899886 43 3799999999999999
Q ss_pred EEEecCCCCc----c-----chH----------------------HHHHHHHHHHHHCCcccccch
Q 022411 92 LIYKKLTSDK----G-----DVD----------------------KAISALEGKLLLAGFLDAQRI 126 (297)
Q Consensus 92 ~i~~~~~~~~----g-----~~~----------------------~~~~~l~~~L~laGFv~v~~~ 126 (297)
++.++..... . ... ...+++...|..+||..+...
T Consensus 224 ~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~ 289 (305)
T 3ocj_A 224 VTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQTRAQLEEAGFTDLRFE 289 (305)
T ss_dssp EEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred EEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHHHHHHHHCCCEEEEEE
Confidence 9988543210 0 000 124577888999999987654
No 20
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.81 E-value=4.7e-09 Score=87.19 Aligned_cols=132 Identities=17% Similarity=0.199 Sum_probs=90.7
Q ss_pred cCceEEEeecCC------------ccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEeccccCCCC
Q 022411 6 MQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP 73 (297)
Q Consensus 6 ~~~~VLll~~~~------------~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~ 73 (297)
.+.+||-+--|+ .++..|+++.|++.++++ ..++.+..++ +++++++||+|++...+++++
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~----~~~v~~~~~d---~~~~~~~~D~v~~~~~l~~~~ 89 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEK----FDSVITLSDP---KEIPDNSVDFILFANSFHDMD 89 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHHH----CTTSEEESSG---GGSCTTCEEEEEEESCSTTCS
T ss_pred CCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHHHHh----CCCcEEEeCC---CCCCCCceEEEEEccchhccc
Confidence 345666664443 234556778888888765 5689999888 788899999999999999987
Q ss_pred -hHHHHHHHHhcccCCcEEEEEecCCCCc--cch-H--HHHHHHHHHHHHCCcccccchhccccCccceeEeeeeecCCC
Q 022411 74 -GDQLLEEISRVLKPGGTILIYKKLTSDK--GDV-D--KAISALEGKLLLAGFLDAQRIQLKSVVPAEVVSFGVKGKKPT 147 (297)
Q Consensus 74 -~~~~L~ei~RvLKPGG~l~i~~~~~~~~--g~~-~--~~~~~l~~~L~laGFv~v~~~~~kp~~~~~~~~~~i~akKP~ 147 (297)
...+++++.|+|||||++++.++..... +.. . ...+++...+. ||..++.....+. .+.+.++++.
T Consensus 90 ~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~~~~~~------~~~l~~~~~~ 161 (170)
T 3i9f_A 90 DKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRFNPTPY------HFGLVLKRKT 161 (170)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEECSSTT------EEEEEEEECC
T ss_pred CHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEccCCCCc------eEEEEEecCC
Confidence 7899999999999999999998754321 111 0 11235665565 9998776543321 3455555554
Q ss_pred CCCCC
Q 022411 148 WKIGS 152 (297)
Q Consensus 148 ~~~gs 152 (297)
-..++
T Consensus 162 ~~~~~ 166 (170)
T 3i9f_A 162 SEGHH 166 (170)
T ss_dssp CCSCC
T ss_pred CCccc
Confidence 44443
No 21
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.81 E-value=3.5e-09 Score=90.52 Aligned_cols=106 Identities=13% Similarity=0.109 Sum_probs=83.8
Q ss_pred ccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEeccccCCCC---hHHHHHHHHhcccCCcEEEEE
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP---GDQLLEEISRVLKPGGTILIY 94 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~---~~~~L~ei~RvLKPGG~l~i~ 94 (297)
.++..|+++.|++.++++ ..++.++.+++..+|+++++||+|++..++++++ ...+++++.|+|||||++++.
T Consensus 65 ~v~gvD~s~~~~~~a~~~----~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 140 (203)
T 3h2b_A 65 QIEGLEPATRLVELARQT----HPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMS 140 (203)
T ss_dssp CEEEECCCHHHHHHHHHH----CTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEE
T ss_pred eEEEEeCCHHHHHHHHHh----CCCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 455667788899988765 4579999999999999999999999999998884 578999999999999999999
Q ss_pred ecCCCCccch--------HHHHHHHHHHHHHCCcccccchh
Q 022411 95 KKLTSDKGDV--------DKAISALEGKLLLAGFLDAQRIQ 127 (297)
Q Consensus 95 ~~~~~~~g~~--------~~~~~~l~~~L~laGFv~v~~~~ 127 (297)
.+.......+ ....+.+...|..+||..+....
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 181 (203)
T 3h2b_A 141 FFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHW 181 (203)
T ss_dssp EECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEE
T ss_pred EccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEe
Confidence 8664321111 01235788889999999876544
No 22
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.80 E-value=4.6e-09 Score=91.87 Aligned_cols=120 Identities=23% Similarity=0.183 Sum_probs=91.4
Q ss_pred ccCceEEEeecCC------------ccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEeccccCCC
Q 022411 5 KMQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHEL 72 (297)
Q Consensus 5 ~~~~~VLll~~~~------------~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~ 72 (297)
+.+.+||-|--|+ .++..|+++.|++.++++. ...++.++.+++..+|+++++||+|++...++|+
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~--~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 129 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKGKERG--EGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWT 129 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHTTT--CBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSS
T ss_pred CCCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhc--ccCCceEEEcchhcCCCCCCCccEEEEcChHhhc
Confidence 3456777775544 3456677888999887653 3468999999999999999999999999999998
Q ss_pred C-hHHHHHHHHhcccCCcEEEEEecCCCCccc---hH-----------HHHHHHHHHHHHCCcccccch
Q 022411 73 P-GDQLLEEISRVLKPGGTILIYKKLTSDKGD---VD-----------KAISALEGKLLLAGFLDAQRI 126 (297)
Q Consensus 73 ~-~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~---~~-----------~~~~~l~~~L~laGFv~v~~~ 126 (297)
+ +..++++++|+|||||++++..+....... .. .....+...+..+||..++..
T Consensus 130 ~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 198 (242)
T 3l8d_A 130 EEPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDGI 198 (242)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred cCHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEee
Confidence 8 789999999999999999999865432110 00 112467888999999987643
No 23
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.80 E-value=5.8e-09 Score=92.23 Aligned_cols=90 Identities=21% Similarity=0.264 Sum_probs=75.2
Q ss_pred ccCceEEEeecCCc------------cChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEeccccCCC
Q 022411 5 KMQSAVLALSEDKI------------LPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHEL 72 (297)
Q Consensus 5 ~~~~~VLll~~~~~------------vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~ 72 (297)
+.+.+||-+--|+. ++..|+++.|++.++++......++.++.+++..+|+++++||+|++...+||+
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 117 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLWHLV 117 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCGGGC
T ss_pred CCCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCchhhc
Confidence 45667887755443 334577789999998876444678999999999999999999999999999999
Q ss_pred C-hHHHHHHHHhcccCCcEEEEE
Q 022411 73 P-GDQLLEEISRVLKPGGTILIY 94 (297)
Q Consensus 73 ~-~~~~L~ei~RvLKPGG~l~i~ 94 (297)
+ ...++.+++|+|||||++++.
T Consensus 118 ~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 118 PDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp TTHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHCCCCcEEEEE
Confidence 7 788999999999999999887
No 24
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.79 E-value=8e-09 Score=89.96 Aligned_cols=116 Identities=16% Similarity=0.134 Sum_probs=87.3
Q ss_pred cCceEEEeecCC------------ccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEeccccCCCC
Q 022411 6 MQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP 73 (297)
Q Consensus 6 ~~~~VLll~~~~------------~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~ 73 (297)
.+.+||-|--|+ .++..|+++.|++.|+++... ++.++.++++.+ +++++||+|++..+++|++
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~---~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~~ 117 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRLKD---GITYIHSRFEDA-QLPRRYDNIVLTHVLEHID 117 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHHSCS---CEEEEESCGGGC-CCSSCEEEEEEESCGGGCS
T ss_pred CCCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhhhC---CeEEEEccHHHc-CcCCcccEEEEhhHHHhhc
Confidence 345666664433 345668889999999876433 799999999988 5788999999999999997
Q ss_pred -hHHHHHHHH-hcccCCcEEEEEecCCCCccc--------------h-----H------HHHHHHHHHHHHCCcccccc
Q 022411 74 -GDQLLEEIS-RVLKPGGTILIYKKLTSDKGD--------------V-----D------KAISALEGKLLLAGFLDAQR 125 (297)
Q Consensus 74 -~~~~L~ei~-RvLKPGG~l~i~~~~~~~~g~--------------~-----~------~~~~~l~~~L~laGFv~v~~ 125 (297)
+..++++++ |+|||||+|++..+....... + . ...+++...|..+||..++.
T Consensus 118 ~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 196 (250)
T 2p7i_A 118 DPVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQVTYR 196 (250)
T ss_dssp SHHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCeEEEE
Confidence 789999999 999999999999865431100 0 0 02346778889999987654
No 25
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.78 E-value=7.2e-09 Score=95.25 Aligned_cols=122 Identities=11% Similarity=0.124 Sum_probs=92.0
Q ss_pred ccCceEEEeecCC-------------ccChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCCCCCCCcccEEEecccc
Q 022411 5 KMQSAVLALSEDK-------------ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSS 69 (297)
Q Consensus 5 ~~~~~VLll~~~~-------------~vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~ 69 (297)
+.+.+||-+--|+ .++..|+++.|++.|++++... ..++.++.+|+..+|+++++||+|++...+
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 195 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNEST 195 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEESCG
T ss_pred CCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECCch
Confidence 4466777765443 3445577889999998876554 357999999999999999999999999999
Q ss_pred CCCChHHHHHHHHhcccCCcEEEEEecCCCCcc-ch----H---H-------HHHHHHHHHHHCCcccccch
Q 022411 70 HELPGDQLLEEISRVLKPGGTILIYKKLTSDKG-DV----D---K-------AISALEGKLLLAGFLDAQRI 126 (297)
Q Consensus 70 ~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~~~g-~~----~---~-------~~~~l~~~L~laGFv~v~~~ 126 (297)
++++...+++++.|+|||||+|++.++...... .. . . ..+++...+..+||..+...
T Consensus 196 ~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~ 267 (312)
T 3vc1_A 196 MYVDLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPHTIV 267 (312)
T ss_dssp GGSCHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEEEE
T ss_pred hhCCHHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEEEE
Confidence 988888999999999999999999876432211 10 0 0 13467778889999876543
No 26
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.77 E-value=1.1e-08 Score=88.69 Aligned_cols=94 Identities=16% Similarity=0.198 Sum_probs=75.3
Q ss_pred ccCceEEEeecCC------------ccChHHHHHHHHHHHHHHhhhcC------CCeEEEEccCCCCCCCCCcccEEEec
Q 022411 5 KMQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQCD------PQIITQASSLSQLPVESFSIDTVLSI 66 (297)
Q Consensus 5 ~~~~~VLll~~~~------------~vt~~dlse~m~~~A~~~~~~~~------~~v~~~~~d~~~Lp~~d~sfD~Vls~ 66 (297)
+.+.+||-+--|+ .++..|+++.|++.++++..... .++.+..+++..+++++++||+|++.
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 108 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQ 108 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEEc
Confidence 4556777775543 34455778899999988664432 26899999999999999999999999
Q ss_pred cccCCCC-hH---HHHHHHHhcccCCcEEEEEecCC
Q 022411 67 SSSHELP-GD---QLLEEISRVLKPGGTILIYKKLT 98 (297)
Q Consensus 67 ~~~~~~~-~~---~~L~ei~RvLKPGG~l~i~~~~~ 98 (297)
..+++++ +. .+++++.|+|||||++++.++..
T Consensus 109 ~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 109 AFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp SCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred chhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCc
Confidence 9999887 55 89999999999999999987654
No 27
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.76 E-value=1.1e-08 Score=92.77 Aligned_cols=80 Identities=9% Similarity=0.080 Sum_probs=69.5
Q ss_pred CccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEeccccCCCC-hHHHHHHHHhcccCCcEEEEEe
Q 022411 17 KILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP-GDQLLEEISRVLKPGGTILIYK 95 (297)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~-~~~~L~ei~RvLKPGG~l~i~~ 95 (297)
..++..|+++.|++.|+++......++.++++|+..+|++ ++||+|++...+++++ ...++++++|+|||||+|++.+
T Consensus 48 ~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 126 (284)
T 3gu3_A 48 SKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELN-DKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFE 126 (284)
T ss_dssp CEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCS-SCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcC-CCeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEe
Confidence 3455668889999999987766556899999999999985 6999999999999988 7899999999999999999988
Q ss_pred cC
Q 022411 96 KL 97 (297)
Q Consensus 96 ~~ 97 (297)
+.
T Consensus 127 ~~ 128 (284)
T 3gu3_A 127 PH 128 (284)
T ss_dssp CC
T ss_pred cc
Confidence 75
No 28
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.75 E-value=1.2e-08 Score=91.38 Aligned_cols=80 Identities=21% Similarity=0.277 Sum_probs=68.9
Q ss_pred ccChHHHHHHHHHHHHHHhhhc-CCCeEEEEccCCCCCCCCCcccEEEeccccCCCC-hHHHHHHHHhcccCCcEEEEEe
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVESFSIDTVLSISSSHELP-GDQLLEEISRVLKPGGTILIYK 95 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~-~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~-~~~~L~ei~RvLKPGG~l~i~~ 95 (297)
.++..|+++.|++.++++.... ..++.++.+++..+|+++++||+|++...+++++ +..+++++.|+|||||.+++.+
T Consensus 63 ~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 63 EITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 3445577888999988876544 3579999999999999999999999999999988 7899999999999999999987
Q ss_pred cC
Q 022411 96 KL 97 (297)
Q Consensus 96 ~~ 97 (297)
+.
T Consensus 143 ~~ 144 (276)
T 3mgg_A 143 GD 144 (276)
T ss_dssp EC
T ss_pred cC
Confidence 54
No 29
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.74 E-value=3.1e-09 Score=93.68 Aligned_cols=120 Identities=9% Similarity=0.056 Sum_probs=89.1
Q ss_pred cCceEEEeecCCc-------------cChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEeccccCCC
Q 022411 6 MQSAVLALSEDKI-------------LPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHEL 72 (297)
Q Consensus 6 ~~~~VLll~~~~~-------------vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~ 72 (297)
.+.+||-|--|+. ++..|+++.|++.|+++.... .++.++.+++..+|+++++||+|++...++|+
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 171 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM-PVGKFILASMETATLPPNTYDLIVIQWTAIYL 171 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS-SEEEEEESCGGGCCCCSSCEEEEEEESCGGGS
T ss_pred CCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC-CceEEEEccHHHCCCCCCCeEEEEEcchhhhC
Confidence 3556777654432 445567888999988765443 67999999999999999999999999999998
Q ss_pred C---hHHHHHHHHhcccCCcEEEEEecCCCCc--------cchHHHHHHHHHHHHHCCcccccch
Q 022411 73 P---GDQLLEEISRVLKPGGTILIYKKLTSDK--------GDVDKAISALEGKLLLAGFLDAQRI 126 (297)
Q Consensus 73 ~---~~~~L~ei~RvLKPGG~l~i~~~~~~~~--------g~~~~~~~~l~~~L~laGFv~v~~~ 126 (297)
+ ...++++++|+|||||+|++.++..... .......+.+...|..+||..++..
T Consensus 172 ~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 236 (254)
T 1xtp_A 172 TDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKEA 236 (254)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEee
Confidence 5 4789999999999999999988532110 0001123477888999999987643
No 30
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.74 E-value=9.5e-09 Score=89.59 Aligned_cols=89 Identities=12% Similarity=0.110 Sum_probs=71.1
Q ss_pred CceEEEeecCC------------ccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEecc-ccCCC-
Q 022411 7 QSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSIS-SSHEL- 72 (297)
Q Consensus 7 ~~~VLll~~~~------------~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~-~~~~~- 72 (297)
+.+||-|--|+ .++..|+++.|++.++++......++.++.+++..++++ ++||+|++.. +++|+
T Consensus 38 ~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~l~~~~ 116 (246)
T 1y8c_A 38 FDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNIN-RKFDLITCCLDSTNYII 116 (246)
T ss_dssp TTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCS-CCEEEEEECTTGGGGCC
T ss_pred CCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCcc-CCceEEEEcCccccccC
Confidence 45677775443 334557788999999887655444899999999999887 8999999998 88888
Q ss_pred --C-hHHHHHHHHhcccCCcEEEEEec
Q 022411 73 --P-GDQLLEEISRVLKPGGTILIYKK 96 (297)
Q Consensus 73 --~-~~~~L~ei~RvLKPGG~l~i~~~ 96 (297)
. ...++++++|+|||||+|++..+
T Consensus 117 ~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 117 DSDDLKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp SHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 3 57899999999999999998543
No 31
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.73 E-value=1.2e-08 Score=91.96 Aligned_cols=89 Identities=15% Similarity=0.152 Sum_probs=72.5
Q ss_pred cCceEEEeecCC------------ccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEeccccCCCC
Q 022411 6 MQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP 73 (297)
Q Consensus 6 ~~~~VLll~~~~------------~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~ 73 (297)
.+.+||-|--|+ .++..|+++.|++.++++. .++.++.+++..+|+ +++||+|++..+++|++
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~----~~~~~~~~d~~~~~~-~~~fD~v~~~~~l~~~~ 131 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQNY----PHLHFDVADARNFRV-DKPLDAVFSNAMLHWVK 131 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----TTSCEEECCTTTCCC-SSCEEEEEEESCGGGCS
T ss_pred CCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHhhC----CCCEEEECChhhCCc-CCCcCEEEEcchhhhCc
Confidence 455777775443 3445577889999887653 678999999999997 57999999999999987
Q ss_pred -hHHHHHHHHhcccCCcEEEEEecCCC
Q 022411 74 -GDQLLEEISRVLKPGGTILIYKKLTS 99 (297)
Q Consensus 74 -~~~~L~ei~RvLKPGG~l~i~~~~~~ 99 (297)
+..++++++|+|||||+|++..+...
T Consensus 132 d~~~~l~~~~~~LkpgG~l~~~~~~~~ 158 (279)
T 3ccf_A 132 EPEAAIASIHQALKSGGRFVAEFGGKG 158 (279)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred CHHHHHHHHHHhcCCCcEEEEEecCCc
Confidence 78999999999999999999877643
No 32
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.72 E-value=6e-09 Score=91.02 Aligned_cols=77 Identities=17% Similarity=0.197 Sum_probs=65.9
Q ss_pred ccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEeccccCCCC-hHHHHHHHHhcccCCcEEEEEec
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP-GDQLLEEISRVLKPGGTILIYKK 96 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~-~~~~L~ei~RvLKPGG~l~i~~~ 96 (297)
.++..|+++.|++.++++... .++.++.+++..+++++++||+|++..++++++ ...++++++|+|||||++++..+
T Consensus 68 ~v~~vD~s~~~~~~a~~~~~~--~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 68 YVLGLDLSEKMLARARAAGPD--TGITYERADLDKLHLPQDSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp EEEEEESCHHHHHHHHHTSCS--SSEEEEECCGGGCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eEEEEcCCHHHHHHHHHhccc--CCceEEEcChhhccCCCCCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEeC
Confidence 455667788999988875433 479999999999999899999999999999887 78999999999999999998764
No 33
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.71 E-value=5.2e-09 Score=90.73 Aligned_cols=79 Identities=9% Similarity=0.059 Sum_probs=64.1
Q ss_pred CCccChHHHHHHHHHHHHHHhhh-------------cCCCeEEEEccCCCCCCCC-CcccEEEeccccCCCCh---HHHH
Q 022411 16 DKILPVSAVLNAIRDLGDEAVEQ-------------CDPQIITQASSLSQLPVES-FSIDTVLSISSSHELPG---DQLL 78 (297)
Q Consensus 16 ~~~vt~~dlse~m~~~A~~~~~~-------------~~~~v~~~~~d~~~Lp~~d-~sfD~Vls~~~~~~~~~---~~~L 78 (297)
+..|+..|+++.|++.|+++... ...++.++++|+.++|+++ ++||+|++...+++++. ..++
T Consensus 44 g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l 123 (203)
T 1pjz_A 44 GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDIGHCAAFYDRAAMIALPADMRERYV 123 (203)
T ss_dssp CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHH
T ss_pred CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccCCCEEEEEECcchhhCCHHHHHHHH
Confidence 34456678899999999876532 2468999999999999876 89999999888888872 4689
Q ss_pred HHHHhcccCCcEEEEE
Q 022411 79 EEISRVLKPGGTILIY 94 (297)
Q Consensus 79 ~ei~RvLKPGG~l~i~ 94 (297)
++++|+|||||++++.
T Consensus 124 ~~~~r~LkpgG~~~l~ 139 (203)
T 1pjz_A 124 QHLEALMPQACSGLLI 139 (203)
T ss_dssp HHHHHHSCSEEEEEEE
T ss_pred HHHHHHcCCCcEEEEE
Confidence 9999999999994444
No 34
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.70 E-value=7.6e-09 Score=91.16 Aligned_cols=109 Identities=13% Similarity=0.116 Sum_probs=83.4
Q ss_pred ccChHHHHHHHHHHHHHHhhhc-CCCeEEEEccCCCCCCCCCcccEEEeccccCCCC-h--HHHHHHHHhcccCCcEEEE
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVESFSIDTVLSISSSHELP-G--DQLLEEISRVLKPGGTILI 93 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~-~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~-~--~~~L~ei~RvLKPGG~l~i 93 (297)
.++..|+++.|++.|+++.... ..++.++.+++..+++++++||+|++...+++++ . ..+++++.|+|||||+|++
T Consensus 104 ~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i 183 (241)
T 2ex4_A 104 EVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVI 183 (241)
T ss_dssp EEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 3446678899999998876543 4568899999999999888999999999999988 3 3799999999999999999
Q ss_pred EecCCCC-------ccchHHHHHHHHHHHHHCCcccccch
Q 022411 94 YKKLTSD-------KGDVDKAISALEGKLLLAGFLDAQRI 126 (297)
Q Consensus 94 ~~~~~~~-------~g~~~~~~~~l~~~L~laGFv~v~~~ 126 (297)
.++.... ........+++...+..+||..+...
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 223 (241)
T 2ex4_A 184 KDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEE 223 (241)
T ss_dssp EEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEE
T ss_pred EEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEee
Confidence 8753221 00111123478888999999877643
No 35
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.70 E-value=1.2e-08 Score=89.88 Aligned_cols=116 Identities=15% Similarity=0.007 Sum_probs=85.5
Q ss_pred ccCceEEEeecCC------------ccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCC--CCCCCcccEEEeccccC
Q 022411 5 KMQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQL--PVESFSIDTVLSISSSH 70 (297)
Q Consensus 5 ~~~~~VLll~~~~------------~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~L--p~~d~sfD~Vls~~~~~ 70 (297)
+.+.+||-|--|+ .++..|+++.|++.++++ +.++.+++..+ |+++++||+|++..+++
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~-------~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~ 112 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFCEGK-------FNVVKSDAIEYLKSLPDKYLDGVMISHFVE 112 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHHHTT-------SEEECSCHHHHHHTSCTTCBSEEEEESCGG
T ss_pred cCCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHHHHHhh-------cceeeccHHHHhhhcCCCCeeEEEECCchh
Confidence 4566787775544 344556677777776653 78888888775 88899999999999999
Q ss_pred CCC-h--HHHHHHHHhcccCCcEEEEEecCCCCccchH-----------HHHHHHHHHHHHCCcccccchh
Q 022411 71 ELP-G--DQLLEEISRVLKPGGTILIYKKLTSDKGDVD-----------KAISALEGKLLLAGFLDAQRIQ 127 (297)
Q Consensus 71 ~~~-~--~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~-----------~~~~~l~~~L~laGFv~v~~~~ 127 (297)
|++ + ..+++++.|+|||||++++..+.......+. ...+.+...+..+||..+....
T Consensus 113 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~ 183 (240)
T 3dli_A 113 HLDPERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDVKIEF 183 (240)
T ss_dssp GSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEEEEEE
T ss_pred hCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEEEEEE
Confidence 987 4 7899999999999999999987654311100 0125777888999999776543
No 36
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.70 E-value=1.4e-08 Score=91.40 Aligned_cols=121 Identities=17% Similarity=0.185 Sum_probs=82.6
Q ss_pred cCceEEEeecCCc-------------cChHHHHHHHHHHHHHHhhhcC------------------------------CC
Q 022411 6 MQSAVLALSEDKI-------------LPVSAVLNAIRDLGDEAVEQCD------------------------------PQ 42 (297)
Q Consensus 6 ~~~~VLll~~~~~-------------vt~~dlse~m~~~A~~~~~~~~------------------------------~~ 42 (297)
.|.+||-|--|+. |+..|+++.|++.|+++++... .+
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAA 134 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhh
Confidence 4556776655442 4456888999999887543211 12
Q ss_pred eE-EEEccCCC-CCCC---CCcccEEEeccccCCCC-----hHHHHHHHHhcccCCcEEEEEecCCCCc---cc--h---
Q 022411 43 II-TQASSLSQ-LPVE---SFSIDTVLSISSSHELP-----GDQLLEEISRVLKPGGTILIYKKLTSDK---GD--V--- 104 (297)
Q Consensus 43 v~-~~~~d~~~-Lp~~---d~sfD~Vls~~~~~~~~-----~~~~L~ei~RvLKPGG~l~i~~~~~~~~---g~--~--- 104 (297)
+. ++.+|+.. .|++ ..+||+|++++.+|++. ...++++++|+|||||+|++........ +. +
T Consensus 135 i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~~~ 214 (263)
T 2a14_A 135 VKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCV 214 (263)
T ss_dssp EEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECC
T ss_pred hheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEeecc
Confidence 33 78889887 3543 67999999999988752 3589999999999999999997543211 10 0
Q ss_pred HHHHHHHHHHHHHCCcccccch
Q 022411 105 DKAISALEGKLLLAGFLDAQRI 126 (297)
Q Consensus 105 ~~~~~~l~~~L~laGFv~v~~~ 126 (297)
.-..+.+...|..+||..++..
T Consensus 215 ~~~~~~l~~~l~~aGF~i~~~~ 236 (263)
T 2a14_A 215 ALEKGEVEQAVLDAGFDIEQLL 236 (263)
T ss_dssp CCCHHHHHHHHHHTTEEEEEEE
T ss_pred ccCHHHHHHHHHHCCCEEEEEe
Confidence 0123478888999999876543
No 37
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.69 E-value=8.4e-09 Score=93.96 Aligned_cols=103 Identities=17% Similarity=-0.008 Sum_probs=74.2
Q ss_pred ChHHHHHHHHHHHHHHhhhc--CCCeE--EEEccCCCCC------CCCCcccEEEeccccCCCC-hHHHHHHHHhcccCC
Q 022411 20 PVSAVLNAIRDLGDEAVEQC--DPQII--TQASSLSQLP------VESFSIDTVLSISSSHELP-GDQLLEEISRVLKPG 88 (297)
Q Consensus 20 t~~dlse~m~~~A~~~~~~~--~~~v~--~~~~d~~~Lp------~~d~sfD~Vls~~~~~~~~-~~~~L~ei~RvLKPG 88 (297)
+..|.+++|++.|+++++.. ..++. +..++++.++ +++++||+|++..++||++ +..+|++++|+||||
T Consensus 86 ~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lkpg 165 (292)
T 2aot_A 86 EVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTN 165 (292)
T ss_dssp EEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEE
T ss_pred EEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCC
Confidence 55677889999998876542 23444 4455665543 5689999999999999998 889999999999999
Q ss_pred cEEEEEecCCCCccchHH------------------HHHHHHHHHHHCCccccc
Q 022411 89 GTILIYKKLTSDKGDVDK------------------AISALEGKLLLAGFLDAQ 124 (297)
Q Consensus 89 G~l~i~~~~~~~~g~~~~------------------~~~~l~~~L~laGFv~v~ 124 (297)
|+|++....... .+.. ...++...|..+||..+.
T Consensus 166 G~l~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 217 (292)
T 2aot_A 166 AKMLIIVVSGSS--GWDKLWKKYGSRFPQDDLCQYITSDDLTQMLDNLGLKYEC 217 (292)
T ss_dssp EEEEEEEECTTS--HHHHHHHHHGGGSCCCTTCCCCCHHHHHHHHHHHTCCEEE
T ss_pred cEEEEEEecCCc--cHHHHHHHHHHhccCCCcccCCCHHHHHHHHHHCCCceEE
Confidence 999988654321 1110 123566778888886543
No 38
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.69 E-value=1.1e-08 Score=92.26 Aligned_cols=80 Identities=14% Similarity=0.147 Sum_probs=68.4
Q ss_pred ccChHHHHHHHHHHHHHHhhhcC--CCeEEEEccCCCCC-CCCCcccEEEeccccCCCC-hHHHHHHHHhcccCCcEEEE
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQCD--PQIITQASSLSQLP-VESFSIDTVLSISSSHELP-GDQLLEEISRVLKPGGTILI 93 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~--~~v~~~~~d~~~Lp-~~d~sfD~Vls~~~~~~~~-~~~~L~ei~RvLKPGG~l~i 93 (297)
.++..|+++.|++.|+++..... .++.++.+++..++ +.+++||+|++...++|++ +..+++++.|+|||||++++
T Consensus 92 ~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~ 171 (285)
T 4htf_A 92 QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSL 171 (285)
T ss_dssp EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchhhcccCHHHHHHHHHHHcCCCeEEEE
Confidence 44566788999999988765432 57999999999988 8889999999999999988 78999999999999999999
Q ss_pred EecC
Q 022411 94 YKKL 97 (297)
Q Consensus 94 ~~~~ 97 (297)
..+.
T Consensus 172 ~~~~ 175 (285)
T 4htf_A 172 MFYN 175 (285)
T ss_dssp EEEB
T ss_pred EEeC
Confidence 8753
No 39
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.68 E-value=2.1e-08 Score=86.14 Aligned_cols=89 Identities=20% Similarity=0.227 Sum_probs=74.9
Q ss_pred cCceEEEeecCC----------ccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEeccccCCCC-h
Q 022411 6 MQSAVLALSEDK----------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP-G 74 (297)
Q Consensus 6 ~~~~VLll~~~~----------~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~-~ 74 (297)
.+.+||-+--|+ .++..|+++.|++.++++. .++.++.+++..+|+++++||+|++..+++|++ +
T Consensus 36 ~~~~vLdiG~G~G~~~~~l~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~ 111 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRLPYPQKVGVEPSEAMLAVGRRRA----PEATWVRAWGEALPFPGESFDVVLLFTTLEFVEDV 111 (211)
T ss_dssp CCSEEEEETCTTCHHHHHCCCSEEEEECCCHHHHHHHHHHC----TTSEEECCCTTSCCSCSSCEEEEEEESCTTTCSCH
T ss_pred CCCeEEEECCCCCHhHHhCCCCeEEEEeCCHHHHHHHHHhC----CCcEEEEcccccCCCCCCcEEEEEEcChhhhcCCH
Confidence 345666664433 5567788899999988764 678999999999999999999999999999987 7
Q ss_pred HHHHHHHHhcccCCcEEEEEecCC
Q 022411 75 DQLLEEISRVLKPGGTILIYKKLT 98 (297)
Q Consensus 75 ~~~L~ei~RvLKPGG~l~i~~~~~ 98 (297)
..+++++.|+|||||++++..+..
T Consensus 112 ~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 112 ERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECT
T ss_pred HHHHHHHHHHcCCCCEEEEEecCC
Confidence 899999999999999999998764
No 40
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.66 E-value=2.7e-08 Score=85.53 Aligned_cols=116 Identities=17% Similarity=0.147 Sum_probs=85.5
Q ss_pred cCceEEEeecCC------------ccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEeccccCCCC
Q 022411 6 MQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP 73 (297)
Q Consensus 6 ~~~~VLll~~~~------------~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~ 73 (297)
.+.+||-|--|+ .++..|+++.|++.++++. ++.+..+++..++ .+++||+|++..++++++
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~ 116 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRL-----GRPVRTMLFHQLD-AIDAYDAVWAHACLLHVP 116 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----TSCCEECCGGGCC-CCSCEEEEEECSCGGGSC
T ss_pred CCCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHhc-----CCceEEeeeccCC-CCCcEEEEEecCchhhcC
Confidence 455666664433 3445577888999888764 5677889999998 789999999999999886
Q ss_pred ---hHHHHHHHHhcccCCcEEEEEecCCCCccc--h-----HHHHHHHHHHHHHCC-cccccchh
Q 022411 74 ---GDQLLEEISRVLKPGGTILIYKKLTSDKGD--V-----DKAISALEGKLLLAG-FLDAQRIQ 127 (297)
Q Consensus 74 ---~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~--~-----~~~~~~l~~~L~laG-Fv~v~~~~ 127 (297)
...++++++|+|||||+|++..+....... . ....+.+...+..+| |..+....
T Consensus 117 ~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~ 181 (211)
T 3e23_A 117 RDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVES 181 (211)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEEe
Confidence 368999999999999999998765321100 0 012357888899999 99876543
No 41
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.64 E-value=1.7e-08 Score=86.31 Aligned_cols=77 Identities=19% Similarity=0.242 Sum_probs=66.6
Q ss_pred hHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEeccccCCCC---hHHHHHHHHhcccCCcEEEEEecC
Q 022411 21 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP---GDQLLEEISRVLKPGGTILIYKKL 97 (297)
Q Consensus 21 ~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~---~~~~L~ei~RvLKPGG~l~i~~~~ 97 (297)
..|+++.|++.++++......++.++.+++..+|+++++||+|++..+++|++ ...++++++|+|||||++++.++.
T Consensus 51 ~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 130 (209)
T 2p8j_A 51 GIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLT 130 (209)
T ss_dssp EEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 44677899999988766555789999999999999999999999998888884 578999999999999999998764
No 42
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.62 E-value=3.8e-08 Score=84.57 Aligned_cols=104 Identities=17% Similarity=0.066 Sum_probs=76.3
Q ss_pred ccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCC---CCCCC-cccEEEeccccCCCChHHHHHHHHhcccCCcEEEE
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQL---PVESF-SIDTVLSISSSHELPGDQLLEEISRVLKPGGTILI 93 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~L---p~~d~-sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i 93 (297)
.++..|+++.|++.++++ .++.+..+++..+ ++... +||+|++...+++-....++++++|+|||||+|++
T Consensus 76 ~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~ 150 (227)
T 3e8s_A 76 EAVGVDGDRTLVDAARAA-----GAGEVHLASYAQLAEAKVPVGKDYDLICANFALLHQDIIELLSAMRTLLVPGGALVI 150 (227)
T ss_dssp EEEEEESCHHHHHHHHHT-----CSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCCSSCCHHHHHHHHHTEEEEEEEEE
T ss_pred EEEEEcCCHHHHHHHHHh-----cccccchhhHHhhcccccccCCCccEEEECchhhhhhHHHHHHHHHHHhCCCeEEEE
Confidence 455667888999988765 4677777777766 55555 49999999988833378999999999999999999
Q ss_pred EecCCCCccc------------------------hHHHHHHHHHHHHHCCcccccch
Q 022411 94 YKKLTSDKGD------------------------VDKAISALEGKLLLAGFLDAQRI 126 (297)
Q Consensus 94 ~~~~~~~~g~------------------------~~~~~~~l~~~L~laGFv~v~~~ 126 (297)
.++....... .....+++...|..+||..++..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 207 (227)
T 3e8s_A 151 QTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLVSLQ 207 (227)
T ss_dssp EECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEEEEE
T ss_pred EecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEEEEe
Confidence 8864321100 00134588889999999987643
No 43
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.61 E-value=9.1e-08 Score=87.10 Aligned_cols=81 Identities=15% Similarity=0.194 Sum_probs=65.9
Q ss_pred CccChHHHHHHHHHHHHHHhhhcC----CCeEEEEccCCCCCCCCCcccEEEec-cccCCCC---hHHHHHHHHhcccCC
Q 022411 17 KILPVSAVLNAIRDLGDEAVEQCD----PQIITQASSLSQLPVESFSIDTVLSI-SSSHELP---GDQLLEEISRVLKPG 88 (297)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~~----~~v~~~~~d~~~Lp~~d~sfD~Vls~-~~~~~~~---~~~~L~ei~RvLKPG 88 (297)
..++..|+++.|++.|+++..... .++.++++|+..+|+ +++||+|++. ..+++++ ...+|++++|+||||
T Consensus 105 ~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pg 183 (299)
T 3g2m_A 105 WEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-DKRFGTVVISSGSINELDEADRRGLYASVREHLEPG 183 (299)
T ss_dssp CCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEE
T ss_pred CeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCC
Confidence 345566888999999998765543 689999999999998 6899988854 5577776 378999999999999
Q ss_pred cEEEEEecCC
Q 022411 89 GTILIYKKLT 98 (297)
Q Consensus 89 G~l~i~~~~~ 98 (297)
|+|++..+..
T Consensus 184 G~l~~~~~~~ 193 (299)
T 3g2m_A 184 GKFLLSLAMS 193 (299)
T ss_dssp EEEEEEEECC
T ss_pred cEEEEEeecC
Confidence 9999987653
No 44
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.59 E-value=3.3e-07 Score=79.49 Aligned_cols=113 Identities=14% Similarity=0.132 Sum_probs=85.6
Q ss_pred CceEEEeecCCccC--------hHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEeccccCCCC-hHHH
Q 022411 7 QSAVLALSEDKILP--------VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP-GDQL 77 (297)
Q Consensus 7 ~~~VLll~~~~~vt--------~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~-~~~~ 77 (297)
+.+||-|--|+... ..|+++.|++.++++ ++.++.+++..+|+++++||+|++..++++++ +..+
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~~~vD~s~~~~~~a~~~------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~ 121 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIKIGVEPSERMAEIARKR------GVFVLKGTAENLPLKDESFDFALMVTTICFVDDPERA 121 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCCEEEESCHHHHHHHHHT------TCEEEECBTTBCCSCTTCEEEEEEESCGGGSSCHHHH
T ss_pred CCcEEEeCCCCCHHHHHHHHHhccCCCHHHHHHHHhc------CCEEEEcccccCCCCCCCeeEEEEcchHhhccCHHHH
Confidence 56788876655443 335668888888764 68899999999999999999999999999887 7899
Q ss_pred HHHHHhcccCCcEEEEEecCCCCcc-ch-----------H----HHHHHHHHHHHHCCcccccc
Q 022411 78 LEEISRVLKPGGTILIYKKLTSDKG-DV-----------D----KAISALEGKLLLAGFLDAQR 125 (297)
Q Consensus 78 L~ei~RvLKPGG~l~i~~~~~~~~g-~~-----------~----~~~~~l~~~L~laGFv~v~~ 125 (297)
++++.++|+|||.+++..+...... .. . ...+++...|..+||..++.
T Consensus 122 l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~ 185 (219)
T 1vlm_A 122 LKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKV 185 (219)
T ss_dssp HHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEE
Confidence 9999999999999999876542110 00 0 02356778888999987654
No 45
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.59 E-value=4.6e-08 Score=85.36 Aligned_cols=89 Identities=12% Similarity=0.201 Sum_probs=70.6
Q ss_pred ccCceEEEeecCC-----------ccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEecc-ccCCC
Q 022411 5 KMQSAVLALSEDK-----------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSIS-SSHEL 72 (297)
Q Consensus 5 ~~~~~VLll~~~~-----------~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~-~~~~~ 72 (297)
+.+.+||-|--|+ .++..|+++.|++.|+++......++.++.+++..++++ ++||+|++.. +++|+
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~ 110 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADHYEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELP-EPVDAITILCDSLNYL 110 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTTSEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCS-SCEEEEEECTTGGGGC
T ss_pred CCCCeEEEecCCCCHHHHHHhhCCeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCC-CCcCEEEEeCCchhhc
Confidence 3456777775544 344567789999999887665556899999999998876 7899999986 77777
Q ss_pred C----hHHHHHHHHhcccCCcEEEEE
Q 022411 73 P----GDQLLEEISRVLKPGGTILIY 94 (297)
Q Consensus 73 ~----~~~~L~ei~RvLKPGG~l~i~ 94 (297)
. ...+++++.|+|||||++++.
T Consensus 111 ~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 111 QTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp CSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 3 467899999999999999884
No 46
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.57 E-value=4.6e-08 Score=89.09 Aligned_cols=81 Identities=15% Similarity=0.117 Sum_probs=69.6
Q ss_pred CCccChHHHHHHHHHHHHHHhhhc---CCCeEEEEccCCCCCCCC------CcccEEEeccccCCCChHHHHHHHHhccc
Q 022411 16 DKILPVSAVLNAIRDLGDEAVEQC---DPQIITQASSLSQLPVES------FSIDTVLSISSSHELPGDQLLEEISRVLK 86 (297)
Q Consensus 16 ~~~vt~~dlse~m~~~A~~~~~~~---~~~v~~~~~d~~~Lp~~d------~sfD~Vls~~~~~~~~~~~~L~ei~RvLK 86 (297)
+..++..|+++.|++.|+++.... ..++.+++++++.+++++ ++||+|++..++||+....+++++.|+||
T Consensus 61 ~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~Lk 140 (299)
T 3g5t_A 61 FEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKIDMITAVECAHWFDFEKFQRSAYANLR 140 (299)
T ss_dssp CSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCEEEEEEESCGGGSCHHHHHHHHHHHEE
T ss_pred CCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCeeEEeHhhHHHHhCHHHHHHHHHHhcC
Confidence 344456677899999999877654 678999999999999888 89999999999999887899999999999
Q ss_pred CCcEEEEEec
Q 022411 87 PGGTILIYKK 96 (297)
Q Consensus 87 PGG~l~i~~~ 96 (297)
|||.|++...
T Consensus 141 pgG~l~i~~~ 150 (299)
T 3g5t_A 141 KDGTIAIWGY 150 (299)
T ss_dssp EEEEEEEEEE
T ss_pred CCcEEEEEec
Confidence 9999998543
No 47
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.56 E-value=3.4e-08 Score=86.49 Aligned_cols=108 Identities=12% Similarity=0.106 Sum_probs=82.2
Q ss_pred ccChHHHHHHHHHHHHHHhhh--cCCCeEEEEccCCCCCCCCCcccEEEeccccCCCC---hHHHHHHHHhcccCCcEEE
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQ--CDPQIITQASSLSQLPVESFSIDTVLSISSSHELP---GDQLLEEISRVLKPGGTIL 92 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~--~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~---~~~~L~ei~RvLKPGG~l~ 92 (297)
.++..|+++.|++.|+++... ...++.++.+|+..++ ++.+||+|++...+++++ ...+++++.|+|||||+|+
T Consensus 90 ~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~ 168 (235)
T 3lcc_A 90 FVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELI 168 (235)
T ss_dssp EEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEE
T ss_pred eEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEE
Confidence 445668889999999887654 3457999999999987 456999999999999886 4789999999999999999
Q ss_pred EEecCCCCc--cc-hHHHHHHHHHHHHHCCcccccch
Q 022411 93 IYKKLTSDK--GD-VDKAISALEGKLLLAGFLDAQRI 126 (297)
Q Consensus 93 i~~~~~~~~--g~-~~~~~~~l~~~L~laGFv~v~~~ 126 (297)
+........ +. .....+.+...|..+||..+...
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 205 (235)
T 3lcc_A 169 TLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVE 205 (235)
T ss_dssp EEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEE
T ss_pred EEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEE
Confidence 887653211 11 11123477888899999876543
No 48
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.56 E-value=1.8e-08 Score=90.09 Aligned_cols=114 Identities=16% Similarity=0.150 Sum_probs=84.0
Q ss_pred ccCceEEEeecCC------------ccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEeccccCCC
Q 022411 5 KMQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHEL 72 (297)
Q Consensus 5 ~~~~~VLll~~~~------------~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~ 72 (297)
+.+.+||-|--|+ .++..|+++.|++.++++ .++.++.++++.+|+++++||+|++..++||+
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~-----~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 107 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQAVVH-----PQVEWFTGYAENLALPDKSVDGVISILAIHHF 107 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSSCCC-----TTEEEECCCTTSCCSCTTCBSEEEEESCGGGC
T ss_pred CCCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHHHHHhc-----cCCEEEECchhhCCCCCCCEeEEEEcchHhhc
Confidence 3456777775543 344556777777765432 28999999999999999999999999999988
Q ss_pred C-hHHHHHHHHhcccCCcEEEEEecCCCCcc-----c-hH----------HHHHHHHHHHHHCCcccccc
Q 022411 73 P-GDQLLEEISRVLKPGGTILIYKKLTSDKG-----D-VD----------KAISALEGKLLLAGFLDAQR 125 (297)
Q Consensus 73 ~-~~~~L~ei~RvLKPGG~l~i~~~~~~~~g-----~-~~----------~~~~~l~~~L~laGFv~v~~ 125 (297)
+ ...++++++|+|| ||++++.++...... . +. .....+. .|..+||.++..
T Consensus 108 ~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~aGF~~v~~ 175 (261)
T 3ege_A 108 SHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFLWEDALRFLPLDEQIN-LLQENTKRRVEA 175 (261)
T ss_dssp SSHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHHHHHHHTSCCHHHHHH-HHHHHHCSEEEE
T ss_pred cCHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHHhhhhhhhCCCHHHHH-HHHHcCCCceeE
Confidence 8 7899999999999 999988876532110 0 00 0124566 889999987754
No 49
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.56 E-value=2e-08 Score=89.14 Aligned_cols=119 Identities=15% Similarity=0.111 Sum_probs=81.7
Q ss_pred cCceEEEeecCCc-------------cChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCC--CCCCCcccEEEec----
Q 022411 6 MQSAVLALSEDKI-------------LPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQL--PVESFSIDTVLSI---- 66 (297)
Q Consensus 6 ~~~~VLll~~~~~-------------vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~L--p~~d~sfD~Vls~---- 66 (297)
.|.+||-|--|+. ++..|+++.|++.|+++......++.++.++++.+ ++++++||.|+.-
T Consensus 60 ~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~~ 139 (236)
T 3orh_A 60 KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPL 139 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCC
T ss_pred CCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeeeec
Confidence 4567776654433 44568889999999988777777888888887643 6789999999753
Q ss_pred -cccCCCC-hHHHHHHHHhcccCCcEEEEEecCC------CCccchHHH-HHHHHHHHHHCCccccc
Q 022411 67 -SSSHELP-GDQLLEEISRVLKPGGTILIYKKLT------SDKGDVDKA-ISALEGKLLLAGFLDAQ 124 (297)
Q Consensus 67 -~~~~~~~-~~~~L~ei~RvLKPGG~l~i~~~~~------~~~g~~~~~-~~~l~~~L~laGFv~v~ 124 (297)
...++++ ...++.|++|+|||||+|++.+... ......... .+.+...|..+||....
T Consensus 140 ~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~eaGF~~~~ 206 (236)
T 3orh_A 140 SEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRREN 206 (236)
T ss_dssp BGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHHTCCGGG
T ss_pred ccchhhhcchhhhhhhhhheeCCCCEEEEEecCCchhhhhhhhhhhhhhhHHHHHHHHHHcCCeEEE
Confidence 2344444 6789999999999999998865321 111111111 23455678889998654
No 50
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.55 E-value=9.7e-08 Score=86.04 Aligned_cols=91 Identities=12% Similarity=0.079 Sum_probs=71.5
Q ss_pred ccCceEEEeecCC-------------ccChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCCCCCCCcccEEEecccc
Q 022411 5 KMQSAVLALSEDK-------------ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSS 69 (297)
Q Consensus 5 ~~~~~VLll~~~~-------------~vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~ 69 (297)
+.|.+||-|--|. .++..|+++.|++.|+++.... ..++.++.+++..+| ++||+|++...+
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~fD~v~~~~~l 139 (287)
T 1kpg_A 63 QPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD---EPVDRIVSIGAF 139 (287)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC---CCCSEEEEESCG
T ss_pred CCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC---CCeeEEEEeCch
Confidence 3456777775443 3344567789999998876543 357999999998776 889999999999
Q ss_pred CCC--C-hHHHHHHHHhcccCCcEEEEEecCC
Q 022411 70 HEL--P-GDQLLEEISRVLKPGGTILIYKKLT 98 (297)
Q Consensus 70 ~~~--~-~~~~L~ei~RvLKPGG~l~i~~~~~ 98 (297)
+|+ . ...+++++.|+|||||++++.++..
T Consensus 140 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 171 (287)
T 1kpg_A 140 EHFGHERYDAFFSLAHRLLPADGVMLLHTITG 171 (287)
T ss_dssp GGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred hhcChHHHHHHHHHHHHhcCCCCEEEEEEecC
Confidence 988 3 5789999999999999999987653
No 51
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.55 E-value=9e-08 Score=81.95 Aligned_cols=90 Identities=12% Similarity=0.151 Sum_probs=71.5
Q ss_pred ccCceEEEeecCC------------ccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEeccccCCC
Q 022411 5 KMQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHEL 72 (297)
Q Consensus 5 ~~~~~VLll~~~~------------~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~ 72 (297)
+.+.+||-|--|+ .++..|+++.|++.+++ ....++.++.+++..+ +++++||+|++..++|++
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~---~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~l~~~ 120 (218)
T 3ou2_A 45 NIRGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGR---HGLDNVEFRQQDLFDW-TPDRQWDAVFFAHWLAHV 120 (218)
T ss_dssp TSCSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGG---GCCTTEEEEECCTTSC-CCSSCEEEEEEESCGGGS
T ss_pred CCCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHh---cCCCCeEEEecccccC-CCCCceeEEEEechhhcC
Confidence 3455777775544 34455677888888765 2236799999999988 788999999999999999
Q ss_pred Ch---HHHHHHHHhcccCCcEEEEEecCC
Q 022411 73 PG---DQLLEEISRVLKPGGTILIYKKLT 98 (297)
Q Consensus 73 ~~---~~~L~ei~RvLKPGG~l~i~~~~~ 98 (297)
+. ..++++++|+|||||++++.++..
T Consensus 121 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 121 PDDRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred CHHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 83 789999999999999999997643
No 52
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.54 E-value=4.2e-08 Score=87.35 Aligned_cols=73 Identities=12% Similarity=0.200 Sum_probs=61.7
Q ss_pred ccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEecc-ccCCCC----hHHHHHHHHhcccCCcEEE
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSIS-SSHELP----GDQLLEEISRVLKPGGTIL 92 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~-~~~~~~----~~~~L~ei~RvLKPGG~l~ 92 (297)
.++..|+++.|++.|+++. .++.++.+|+..+++ +++||+|++.. +++|++ ...++++++|+|||||+|+
T Consensus 74 ~v~gvD~s~~~~~~a~~~~----~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~ 148 (263)
T 3pfg_A 74 TVEGLELSADMLAIARRRN----PDAVLHHGDMRDFSL-GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVV 148 (263)
T ss_dssp EEEEEESCHHHHHHHHHHC----TTSEEEECCTTTCCC-SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEE
T ss_pred eEEEEECCHHHHHHHHhhC----CCCEEEECChHHCCc-cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEE
Confidence 3456688899999988754 378999999999988 78999999997 888885 3578999999999999999
Q ss_pred EEe
Q 022411 93 IYK 95 (297)
Q Consensus 93 i~~ 95 (297)
+..
T Consensus 149 i~~ 151 (263)
T 3pfg_A 149 VEP 151 (263)
T ss_dssp ECC
T ss_pred EEe
Confidence 863
No 53
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.54 E-value=5.9e-08 Score=87.53 Aligned_cols=80 Identities=11% Similarity=-0.008 Sum_probs=64.8
Q ss_pred CCccChHHHHHHHHHHHHHHhhh------------------cCCCeEEEEccCCCCCCCC-CcccEEEeccccCCCC---
Q 022411 16 DKILPVSAVLNAIRDLGDEAVEQ------------------CDPQIITQASSLSQLPVES-FSIDTVLSISSSHELP--- 73 (297)
Q Consensus 16 ~~~vt~~dlse~m~~~A~~~~~~------------------~~~~v~~~~~d~~~Lp~~d-~sfD~Vls~~~~~~~~--- 73 (297)
+..|+..|+++.|++.|+++... ...++.++++|+..+++++ ++||+|++..++++++
T Consensus 90 G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~~~~~~~FD~V~~~~~l~~l~~~~ 169 (252)
T 2gb4_A 90 GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGD 169 (252)
T ss_dssp TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGGGGCCCCEEEEEESSSTTTSCGGG
T ss_pred CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCCcccCCCEEEEEEhhhhhhCCHHH
Confidence 34556679999999999765431 2368999999999999875 8999999988888887
Q ss_pred hHHHHHHHHhcccCCcEEEEEe
Q 022411 74 GDQLLEEISRVLKPGGTILIYK 95 (297)
Q Consensus 74 ~~~~L~ei~RvLKPGG~l~i~~ 95 (297)
...+++++.|+|||||+|++..
T Consensus 170 ~~~~l~~~~~~LkpGG~l~l~~ 191 (252)
T 2gb4_A 170 HDRYADIILSLLRKEFQYLVAV 191 (252)
T ss_dssp HHHHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCeEEEEEE
Confidence 2568999999999999997543
No 54
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.53 E-value=9.7e-08 Score=84.37 Aligned_cols=108 Identities=19% Similarity=0.195 Sum_probs=76.7
Q ss_pred cChHHHHHHHHHHHHHHhhhcC------------------------------CCe-EEEEccCCCCC-CCC---CcccEE
Q 022411 19 LPVSAVLNAIRDLGDEAVEQCD------------------------------PQI-ITQASSLSQLP-VES---FSIDTV 63 (297)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~~------------------------------~~v-~~~~~d~~~Lp-~~d---~sfD~V 63 (297)
++..|+++.|++.++++..... .++ .+..+++..++ +++ ++||+|
T Consensus 82 v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v 161 (265)
T 2i62_A 82 IIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRAIKQVLKCDVTQSQPLGGVSLPPADCL 161 (265)
T ss_dssp EEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEE
T ss_pred EEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhhheeEEEeeeccCCCCCccccCCccEE
Confidence 3455788899999887654321 027 88999998764 356 899999
Q ss_pred EeccccC----CCC-hHHHHHHHHhcccCCcEEEEEecCCCCc---cc-----hHHHHHHHHHHHHHCCcccccch
Q 022411 64 LSISSSH----ELP-GDQLLEEISRVLKPGGTILIYKKLTSDK---GD-----VDKAISALEGKLLLAGFLDAQRI 126 (297)
Q Consensus 64 ls~~~~~----~~~-~~~~L~ei~RvLKPGG~l~i~~~~~~~~---g~-----~~~~~~~l~~~L~laGFv~v~~~ 126 (297)
++..++| +++ ...++++++|+|||||+|++........ +. .....+.+...|..+||..+...
T Consensus 162 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 237 (265)
T 2i62_A 162 LSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKFSSLPLGWETVRDAVEEAGYTIEQFE 237 (265)
T ss_dssp EEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred EEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCccccccccCHHHHHHHHHHCCCEEEEEE
Confidence 9999888 444 5789999999999999999987543211 00 00113477788999999876543
No 55
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.53 E-value=2.3e-07 Score=87.38 Aligned_cols=107 Identities=10% Similarity=0.063 Sum_probs=78.9
Q ss_pred cChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCC--CCCCCcccEEEeccccCCCC-h--HHHHHHHHhcccCCcEE
Q 022411 19 LPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQL--PVESFSIDTVLSISSSHELP-G--DQLLEEISRVLKPGGTI 91 (297)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~L--p~~d~sfD~Vls~~~~~~~~-~--~~~L~ei~RvLKPGG~l 91 (297)
++..|+ +.|++.|++++... ..++.++.+|+... |++ ++||+|++...+|+++ . ..+|++++|+|||||+|
T Consensus 206 ~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l 283 (363)
T 3dp7_A 206 VTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKV 283 (363)
T ss_dssp EEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEE
T ss_pred EEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEE
Confidence 334455 78889988876543 25799999999875 566 7899999999999887 3 47899999999999999
Q ss_pred EEEecCCCCccchH----------------------HHHHHHHHHHHHCCcccccchh
Q 022411 92 LIYKKLTSDKGDVD----------------------KAISALEGKLLLAGFLDAQRIQ 127 (297)
Q Consensus 92 ~i~~~~~~~~g~~~----------------------~~~~~l~~~L~laGFv~v~~~~ 127 (297)
+|.+.......... .+.+++...|..+||..++...
T Consensus 284 ~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AGf~~v~~~~ 341 (363)
T 3dp7_A 284 YIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAGLEVEEIQD 341 (363)
T ss_dssp EEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTEEESCCCC
T ss_pred EEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcCCeEEEEEe
Confidence 99886532211110 0235677788889998876543
No 56
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.51 E-value=8.4e-08 Score=84.63 Aligned_cols=88 Identities=10% Similarity=0.069 Sum_probs=71.6
Q ss_pred cCceEEEeecCC--------------ccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEeccccCC
Q 022411 6 MQSAVLALSEDK--------------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHE 71 (297)
Q Consensus 6 ~~~~VLll~~~~--------------~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~ 71 (297)
.+.+||-|--|+ .++..|+++.|++.++++ ..++.++.+++..++ ++++||+|++...+||
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~----~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~ 107 (259)
T 2p35_A 33 RVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR----LPNTNFGKADLATWK-PAQKADLLYANAVFQW 107 (259)
T ss_dssp CCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH----STTSEEEECCTTTCC-CSSCEEEEEEESCGGG
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh----CCCcEEEECChhhcC-ccCCcCEEEEeCchhh
Confidence 455677765443 344556778888888765 467999999999998 7889999999999999
Q ss_pred CC-hHHHHHHHHhcccCCcEEEEEecCC
Q 022411 72 LP-GDQLLEEISRVLKPGGTILIYKKLT 98 (297)
Q Consensus 72 ~~-~~~~L~ei~RvLKPGG~l~i~~~~~ 98 (297)
++ ...++.+++|+|||||+|++..+..
T Consensus 108 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 135 (259)
T 2p35_A 108 VPDHLAVLSQLMDQLESGGVLAVQMPDN 135 (259)
T ss_dssp STTHHHHHHHHGGGEEEEEEEEEEEECC
T ss_pred CCCHHHHHHHHHHhcCCCeEEEEEeCCC
Confidence 97 7899999999999999999988643
No 57
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.49 E-value=1.2e-07 Score=85.12 Aligned_cols=93 Identities=18% Similarity=0.089 Sum_probs=73.0
Q ss_pred ccCceEEEeecCCc-------------cChHHHHHHHHHHHHHHhhhcC--CCeEEEEccCCCCCC-CCCcccEEEeccc
Q 022411 5 KMQSAVLALSEDKI-------------LPVSAVLNAIRDLGDEAVEQCD--PQIITQASSLSQLPV-ESFSIDTVLSISS 68 (297)
Q Consensus 5 ~~~~~VLll~~~~~-------------vt~~dlse~m~~~A~~~~~~~~--~~v~~~~~d~~~Lp~-~d~sfD~Vls~~~ 68 (297)
+.+.+||-+--|+. ++..|+++.|++.|+++..... .++.++.+++..+|+ ++++||+|++..+
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 142 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFS 142 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESC
T ss_pred CCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECch
Confidence 45667887755443 3355777899999988765432 468999999999988 6889999999988
Q ss_pred cCC--CC---hHHHHHHHHhcccCCcEEEEEecC
Q 022411 69 SHE--LP---GDQLLEEISRVLKPGGTILIYKKL 97 (297)
Q Consensus 69 ~~~--~~---~~~~L~ei~RvLKPGG~l~i~~~~ 97 (297)
+|+ .+ ...+++++.|+|||||+|++..+.
T Consensus 143 l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 143 FHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp GGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 877 33 478999999999999999988754
No 58
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.49 E-value=4.9e-08 Score=85.89 Aligned_cols=106 Identities=14% Similarity=0.102 Sum_probs=75.2
Q ss_pred ccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCC--CCCCCcccEEEe-cccc--CCCC---hHHHHHHHHhcccCCc
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQL--PVESFSIDTVLS-ISSS--HELP---GDQLLEEISRVLKPGG 89 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~L--p~~d~sfD~Vls-~~~~--~~~~---~~~~L~ei~RvLKPGG 89 (297)
.++..|+++.|++.|+++......++.++.+++..+ |+++++||+|++ .+.+ +..+ ...++++++|+|||||
T Consensus 85 ~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG 164 (236)
T 1zx0_A 85 EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGG 164 (236)
T ss_dssp EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEE
T ss_pred eEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCe
Confidence 344668889999999987766567899999999988 899999999999 4442 2222 2467999999999999
Q ss_pred EEEEEecCCC------CccchHHHH-HHHHHHHHHCCcccc
Q 022411 90 TILIYKKLTS------DKGDVDKAI-SALEGKLLLAGFLDA 123 (297)
Q Consensus 90 ~l~i~~~~~~------~~g~~~~~~-~~l~~~L~laGFv~v 123 (297)
+|++.+.... ........+ +.....|..+||...
T Consensus 165 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~ 205 (236)
T 1zx0_A 165 VLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRRE 205 (236)
T ss_dssp EEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHTTCCGG
T ss_pred EEEEEecCcHHHhhchhhhhhhhhccHHHHHHHHHCCCCCC
Confidence 9998764311 111111111 234457889999853
No 59
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.48 E-value=5.7e-08 Score=88.02 Aligned_cols=109 Identities=17% Similarity=0.225 Sum_probs=75.4
Q ss_pred ccChHHHHHHHHHHHHHHhhhc-----------------C--------------CCeEEEEccCCC-CCCC-----CCcc
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQC-----------------D--------------PQIITQASSLSQ-LPVE-----SFSI 60 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~-----------------~--------------~~v~~~~~d~~~-Lp~~-----d~sf 60 (297)
.|+..|+++.|++.|++++... . ..+.++.+|+.. +|++ +++|
T Consensus 96 ~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~f 175 (289)
T 2g72_A 96 DITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPA 175 (289)
T ss_dssp EEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSE
T ss_pred eEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhhhceEEecccCCCCCccccccCCCCC
Confidence 4455688899999888754321 0 014567778887 6643 4679
Q ss_pred cEEEeccccCC----CC-hHHHHHHHHhcccCCcEEEEEecCCCCc---c-----chHHHHHHHHHHHHHCCcccccch
Q 022411 61 DTVLSISSSHE----LP-GDQLLEEISRVLKPGGTILIYKKLTSDK---G-----DVDKAISALEGKLLLAGFLDAQRI 126 (297)
Q Consensus 61 D~Vls~~~~~~----~~-~~~~L~ei~RvLKPGG~l~i~~~~~~~~---g-----~~~~~~~~l~~~L~laGFv~v~~~ 126 (297)
|+|+++++++| ++ ...++++++|+|||||+|++........ + ......+.+...|..+||..+...
T Consensus 176 D~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~ 254 (289)
T 2g72_A 176 DALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRSGYKVRDLR 254 (289)
T ss_dssp EEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred CEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeeeeeccCCHHHHHHHHHHcCCeEEEee
Confidence 99999999988 44 5789999999999999999875332210 0 000123478888999999876543
No 60
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.47 E-value=9.8e-07 Score=76.71 Aligned_cols=113 Identities=17% Similarity=0.232 Sum_probs=81.6
Q ss_pred cccCceEEEeecC--------------CccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCC-CCCCCcccEEEeccc
Q 022411 4 GKMQSAVLALSED--------------KILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQL-PVESFSIDTVLSISS 68 (297)
Q Consensus 4 ~~~~~~VLll~~~--------------~~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~L-p~~d~sfD~Vls~~~ 68 (297)
.+.|.+||-+--| ..++..|+++.|++.|++++.....++.++.+|+..+ ++++++||+|+++..
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp 132 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPP 132 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCC
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCC
Confidence 3456677777666 2344567788999999988766545899999997533 566789999999866
Q ss_pred cCCCC--------------------hHHHHHHHHhcccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCccc
Q 022411 69 SHELP--------------------GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLD 122 (297)
Q Consensus 69 ~~~~~--------------------~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~ 122 (297)
+++.. ...++.++.++|||||++++..+.. ......+...+..+||..
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~------~~~~~~~~~~l~~~g~~~ 200 (230)
T 3evz_A 133 YYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDK------EKLLNVIKERGIKLGYSV 200 (230)
T ss_dssp CC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESC------HHHHHHHHHHHHHTTCEE
T ss_pred CcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEeccc------HhHHHHHHHHHHHcCCce
Confidence 55432 2678999999999999999875432 122346777889999953
No 61
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.47 E-value=1.6e-07 Score=81.09 Aligned_cols=91 Identities=22% Similarity=0.258 Sum_probs=72.0
Q ss_pred CceEEEeecCC------------ccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEecccc--CCC
Q 022411 7 QSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSS--HEL 72 (297)
Q Consensus 7 ~~~VLll~~~~------------~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~--~~~ 72 (297)
+.+||-|--|+ .++..|+++.|++.|+++......++.++.+|+..+++++++||+|++...+ ++.
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~ 118 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVHFEP 118 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGGCCH
T ss_pred CCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchHhCCH
Confidence 45677765544 3345567789999998876555578999999999999888999999999874 443
Q ss_pred C-hHHHHHHHHhcccCCcEEEEEecC
Q 022411 73 P-GDQLLEEISRVLKPGGTILIYKKL 97 (297)
Q Consensus 73 ~-~~~~L~ei~RvLKPGG~l~i~~~~ 97 (297)
. ...+++++.++|||||++++.++.
T Consensus 119 ~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 119 LELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 3 578999999999999999988764
No 62
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.46 E-value=2.3e-07 Score=85.04 Aligned_cols=118 Identities=8% Similarity=0.086 Sum_probs=86.5
Q ss_pred ccCceEEEeecCC-------------ccChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCCCCCCCcccEEEecccc
Q 022411 5 KMQSAVLALSEDK-------------ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSS 69 (297)
Q Consensus 5 ~~~~~VLll~~~~-------------~vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~ 69 (297)
+.|.+||-+--|+ .++..|+++.|++.|+++.... ..++.++.+++..+| ++||+|++..++
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~fD~v~~~~~l 165 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA---EPVDRIVSIEAF 165 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC---CCCSEEEEESCG
T ss_pred CCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC---CCcCEEEEeChH
Confidence 3466777775443 3445577789999998876543 356999999998875 789999999999
Q ss_pred CCCC---hHHHHHHHHhcccCCcEEEEEecCCCCccch---------------H------------HHHHHHHHHHHHCC
Q 022411 70 HELP---GDQLLEEISRVLKPGGTILIYKKLTSDKGDV---------------D------------KAISALEGKLLLAG 119 (297)
Q Consensus 70 ~~~~---~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~---------------~------------~~~~~l~~~L~laG 119 (297)
++++ ...+++++.|+|||||++++.++........ . ...+++...+..+|
T Consensus 166 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aG 245 (318)
T 2fk8_A 166 EHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTEMMVEHGEKAG 245 (318)
T ss_dssp GGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHHTT
T ss_pred HhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCCHHHHHHHHHhCC
Confidence 9884 5789999999999999999988764321100 0 01346677788899
Q ss_pred cccccc
Q 022411 120 FLDAQR 125 (297)
Q Consensus 120 Fv~v~~ 125 (297)
|..+..
T Consensus 246 f~~~~~ 251 (318)
T 2fk8_A 246 FTVPEP 251 (318)
T ss_dssp CBCCCC
T ss_pred CEEEEE
Confidence 987654
No 63
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.45 E-value=3.1e-07 Score=84.99 Aligned_cols=104 Identities=13% Similarity=0.164 Sum_probs=77.5
Q ss_pred hHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCCCCCCCcccEEEeccccCCCCh---HHHHHHHHhcccCCcEEEEEe
Q 022411 21 VSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIYK 95 (297)
Q Consensus 21 ~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~~---~~~L~ei~RvLKPGG~l~i~~ 95 (297)
..|+ +.|++.|+++.... ..++.++.+|+. .|++. .||+|++...+|+++. ..++++++++|||||+|+|.+
T Consensus 198 ~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~-~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 274 (332)
T 3i53_A 198 VLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPA-GAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIE 274 (332)
T ss_dssp EEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCC-SCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred EecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCC-CCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 3466 78888888766543 467999999996 45555 8999999999999883 789999999999999999998
Q ss_pred cCCCCccc---hH-----------HHHHHHHHHHHHCCcccccchh
Q 022411 96 KLTSDKGD---VD-----------KAISALEGKLLLAGFLDAQRIQ 127 (297)
Q Consensus 96 ~~~~~~g~---~~-----------~~~~~l~~~L~laGFv~v~~~~ 127 (297)
........ .+ .+.+++...|..+||..++...
T Consensus 275 ~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 320 (332)
T 3i53_A 275 AVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAAHP 320 (332)
T ss_dssp CCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred ecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEEEE
Confidence 65322111 00 1135678889999999876543
No 64
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.44 E-value=3.6e-07 Score=83.19 Aligned_cols=91 Identities=8% Similarity=0.124 Sum_probs=72.4
Q ss_pred ccCceEEEeecC-------------CccChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCCCCCCCcccEEEecccc
Q 022411 5 KMQSAVLALSED-------------KILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSS 69 (297)
Q Consensus 5 ~~~~~VLll~~~-------------~~vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~ 69 (297)
+.|.+||-|--| ..++..|+++.|++.|+++.... ..++.++.+|+..+ +++||+|++...+
T Consensus 71 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~fD~v~~~~~~ 147 (302)
T 3hem_A 71 EPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---DEPVDRIVSLGAF 147 (302)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---CCCCSEEEEESCG
T ss_pred CCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---CCCccEEEEcchH
Confidence 456677776443 34455677889999998876553 34799999999876 7899999999999
Q ss_pred CCCC-h---------HHHHHHHHhcccCCcEEEEEecCC
Q 022411 70 HELP-G---------DQLLEEISRVLKPGGTILIYKKLT 98 (297)
Q Consensus 70 ~~~~-~---------~~~L~ei~RvLKPGG~l~i~~~~~ 98 (297)
++++ + ..+++++.|+|||||++++.+...
T Consensus 148 ~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 186 (302)
T 3hem_A 148 EHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITI 186 (302)
T ss_dssp GGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEEC
T ss_pred HhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEec
Confidence 9985 3 689999999999999999988754
No 65
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.43 E-value=4.8e-07 Score=81.19 Aligned_cols=126 Identities=13% Similarity=0.037 Sum_probs=87.1
Q ss_pred cccCceEEEeecCCccC---------------hHHHHHHHHHHHHHHhhhcCCCeEEEEccCC---CCCCCCCcccEEEe
Q 022411 4 GKMQSAVLALSEDKILP---------------VSAVLNAIRDLGDEAVEQCDPQIITQASSLS---QLPVESFSIDTVLS 65 (297)
Q Consensus 4 ~~~~~~VLll~~~~~vt---------------~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~---~Lp~~d~sfD~Vls 65 (297)
+|.|++||.|--|+..+ ..|++++|++.+++++++ ..++..+.++.. ..++..++||+|++
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~-~~ni~~V~~d~~~p~~~~~~~~~vDvVf~ 153 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRD-RRNIFPILGDARFPEKYRHLVEGVDGLYA 153 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTT-CTTEEEEESCTTCGGGGTTTCCCEEEEEE
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHh-hcCeeEEEEeccCccccccccceEEEEEE
Confidence 57899999997766544 225668899988876543 468888887764 45677889999987
Q ss_pred ccccCCCChHHHHHHHHhcccCCcEEEEEecCCCC--ccchHHHHHHHHHHHHHCCcccccchhcccc
Q 022411 66 ISSSHELPGDQLLEEISRVLKPGGTILIYKKLTSD--KGDVDKAISALEGKLLLAGFLDAQRIQLKSV 131 (297)
Q Consensus 66 ~~~~~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~~--~g~~~~~~~~l~~~L~laGFv~v~~~~~kp~ 131 (297)
....++ ....++.+++|+|||||+++|....... ..+......+..+.|..+||..++.....|.
T Consensus 154 d~~~~~-~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF~l~e~i~L~pf 220 (233)
T 4df3_A 154 DVAQPE-QAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLEIKDVVHLDPF 220 (233)
T ss_dssp CCCCTT-HHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTCCEEEEEECTTT
T ss_pred eccCCh-hHHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCCEEEEEEccCCC
Confidence 653322 2568899999999999999987543211 0112233445567788999988776555443
No 66
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.42 E-value=2.4e-07 Score=78.87 Aligned_cols=105 Identities=16% Similarity=0.149 Sum_probs=75.8
Q ss_pred ccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEeccccCCC-C-hHHHHHHHHhcccCCcEEEEEe
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHEL-P-GDQLLEEISRVLKPGGTILIYK 95 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~-~-~~~~L~ei~RvLKPGG~l~i~~ 95 (297)
.++..|+++.|++.|+++......++.++.+++..+++++++||+|++.+ .|+. . ...++.++.++|||||++++..
T Consensus 53 ~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 131 (202)
T 2kw5_A 53 EVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIF-CHLPSSLRQQLYPKVYQGLKPGGVFILEG 131 (202)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEEC-CCCCHHHHHHHHHHHHTTCCSSEEEEEEE
T ss_pred eEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEEh-hcCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 34456778899999988766555589999999999999999999999864 2331 2 5789999999999999999998
Q ss_pred cCCCCc----cch-----HHHHHHHHHHHHHCCcccccc
Q 022411 96 KLTSDK----GDV-----DKAISALEGKLLLAGFLDAQR 125 (297)
Q Consensus 96 ~~~~~~----g~~-----~~~~~~l~~~L~laGFv~v~~ 125 (297)
+..... +.. ....+++...+. ||..+..
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~~ 168 (202)
T 2kw5_A 132 FAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNWLIA 168 (202)
T ss_dssp ECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCEEEE
T ss_pred eccccccCCCCCCCcceeecCHHHHHHHhc--CceEEEE
Confidence 654321 000 012345655555 9987654
No 67
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.41 E-value=2.1e-07 Score=80.12 Aligned_cols=78 Identities=15% Similarity=0.161 Sum_probs=65.9
Q ss_pred ccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEeccccCCCC-h---HHHHHHHHhcccCCcEEEE
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP-G---DQLLEEISRVLKPGGTILI 93 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~-~---~~~L~ei~RvLKPGG~l~i 93 (297)
.++..|+++.|++.++++... ..++.++.+++..++ ++++||+|++..++||++ + ..++.++.|+|||||.|++
T Consensus 75 ~v~~vD~s~~~~~~a~~~~~~-~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 152 (216)
T 3ofk_A 75 RLTVIDVMPRAIGRACQRTKR-WSHISWAATDILQFS-TAELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVF 152 (216)
T ss_dssp EEEEEESCHHHHHHHHHHTTT-CSSEEEEECCTTTCC-CSCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHhccc-CCCeEEEEcchhhCC-CCCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 344567889999999887544 448999999999998 688999999999999988 4 4679999999999999999
Q ss_pred EecC
Q 022411 94 YKKL 97 (297)
Q Consensus 94 ~~~~ 97 (297)
..+.
T Consensus 153 ~~~~ 156 (216)
T 3ofk_A 153 GSAR 156 (216)
T ss_dssp EEEC
T ss_pred EecC
Confidence 8754
No 68
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.39 E-value=5e-07 Score=77.74 Aligned_cols=79 Identities=23% Similarity=0.273 Sum_probs=64.9
Q ss_pred CeEEEEccCCCCCCCCCcccEEEeccccCCCChHHHHHHHHhcccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCcc
Q 022411 42 QIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFL 121 (297)
Q Consensus 42 ~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv 121 (297)
++.+..+++..+|+++++||+|++..++|+.....++.+++|+|+|||++++.++.... . ..+.+...+..+||.
T Consensus 98 ~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~-~----~~~~~~~~l~~~Gf~ 172 (215)
T 2zfu_A 98 DPRVTVCDMAQVPLEDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVSSRF-E----DVRTFLRAVTKLGFK 172 (215)
T ss_dssp STTEEESCTTSCSCCTTCEEEEEEESCCCSSCHHHHHHHHHHHEEEEEEEEEEECGGGC-S----CHHHHHHHHHHTTEE
T ss_pred CceEEEeccccCCCCCCCEeEEEEehhccccCHHHHHHHHHHhCCCCeEEEEEEcCCCC-C----CHHHHHHHHHHCCCE
Confidence 57788999999999999999999999888644789999999999999999998765311 1 223677889999998
Q ss_pred cccc
Q 022411 122 DAQR 125 (297)
Q Consensus 122 ~v~~ 125 (297)
.+..
T Consensus 173 ~~~~ 176 (215)
T 2zfu_A 173 IVSK 176 (215)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7653
No 69
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.39 E-value=2.5e-07 Score=78.02 Aligned_cols=91 Identities=19% Similarity=0.096 Sum_probs=71.6
Q ss_pred cCceEEEeecCC------------ccChHHHHHHHHHHHHHHhhhc-CCCeEEEEccCCCCCCCCCcccEEEeccccCCC
Q 022411 6 MQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVESFSIDTVLSISSSHEL 72 (297)
Q Consensus 6 ~~~~VLll~~~~------------~vt~~dlse~m~~~A~~~~~~~-~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~ 72 (297)
.+.+||-+--|+ .++..|+++.|++.++++.... ..++.++.+++..+++ +++||+|++...++++
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~l~~~ 110 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYDFILSTVVLMFL 110 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEEEEEEESCGGGS
T ss_pred CCCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCceEEEEcchhhhC
Confidence 345677664443 3445577788999988776543 3479999999999988 8899999999988888
Q ss_pred C---hHHHHHHHHhcccCCcEEEEEecC
Q 022411 73 P---GDQLLEEISRVLKPGGTILIYKKL 97 (297)
Q Consensus 73 ~---~~~~L~ei~RvLKPGG~l~i~~~~ 97 (297)
+ ...++.++.|+|||||++++.++.
T Consensus 111 ~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (199)
T 2xvm_A 111 EAKTIPGLIANMQRCTKPGGYNLIVAAM 138 (199)
T ss_dssp CGGGHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred CHHHHHHHHHHHHHhcCCCeEEEEEEee
Confidence 6 478999999999999998877643
No 70
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.39 E-value=2.4e-07 Score=79.62 Aligned_cols=114 Identities=15% Similarity=0.084 Sum_probs=81.5
Q ss_pred cCceEEEeecCC------------ccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCC--CCCCCCcccEEEeccccCC
Q 022411 6 MQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQ--LPVESFSIDTVLSISSSHE 71 (297)
Q Consensus 6 ~~~~VLll~~~~------------~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~--Lp~~d~sfD~Vls~~~~~~ 71 (297)
.+.+||-+-.|+ .++..|+++.|++.++++. ..+..+++.. +|+++++||+|++...++|
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~------~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~ 105 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAKEKL------DHVVLGDIETMDMPYEEEQFDCVIFGDVLEH 105 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHHHHHHTTS------SEEEESCTTTCCCCSCTTCEEEEEEESCGGG
T ss_pred CCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC------CcEEEcchhhcCCCCCCCccCEEEECChhhh
Confidence 455677664443 3445567778888776543 2677888876 6788899999999999988
Q ss_pred CC-hHHHHHHHHhcccCCcEEEEEecCCCCcc----------------c------hHHHHHHHHHHHHHCCcccccc
Q 022411 72 LP-GDQLLEEISRVLKPGGTILIYKKLTSDKG----------------D------VDKAISALEGKLLLAGFLDAQR 125 (297)
Q Consensus 72 ~~-~~~~L~ei~RvLKPGG~l~i~~~~~~~~g----------------~------~~~~~~~l~~~L~laGFv~v~~ 125 (297)
++ +..++.++.++|||||.+++..+...... . .....+++...+..+||..+..
T Consensus 106 ~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 182 (230)
T 3cc8_A 106 LFDPWAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYSISKV 182 (230)
T ss_dssp SSCHHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEEEEEE
T ss_pred cCCHHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCCeEEEE
Confidence 87 78999999999999999999876432100 0 0012346777888899987654
No 71
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.38 E-value=1.6e-07 Score=86.89 Aligned_cols=80 Identities=13% Similarity=0.076 Sum_probs=62.3
Q ss_pred ccChHHHHHHHHHHHHHHhhhcCC-------CeEEEEccC------CCC--CCCCCcccEEEeccccCCC----ChHHHH
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQCDP-------QIITQASSL------SQL--PVESFSIDTVLSISSSHEL----PGDQLL 78 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~~-------~v~~~~~d~------~~L--p~~d~sfD~Vls~~~~~~~----~~~~~L 78 (297)
.|+..|+++.|++.|+++...... ++.+.++++ +.+ ++++++||+|++.+++|++ +...++
T Consensus 73 ~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~~~FD~V~~~~~lhy~~~~~~~~~~l 152 (302)
T 2vdw_A 73 LLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYFGKFNIIDWQFAIHYSFHPRHYATVM 152 (302)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCSSCEEEEEEESCGGGTCSTTTHHHHH
T ss_pred eEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccCCCeeEEEECchHHHhCCHHHHHHHH
Confidence 345668999999999987654332 267778777 433 3567899999999988874 247899
Q ss_pred HHHHhcccCCcEEEEEecC
Q 022411 79 EEISRVLKPGGTILIYKKL 97 (297)
Q Consensus 79 ~ei~RvLKPGG~l~i~~~~ 97 (297)
++++|+|||||+|++..+.
T Consensus 153 ~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 153 NNLSELTASGGKVLITTMD 171 (302)
T ss_dssp HHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHcCCCCEEEEEeCC
Confidence 9999999999999988764
No 72
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.37 E-value=9e-07 Score=73.90 Aligned_cols=112 Identities=13% Similarity=0.061 Sum_probs=82.9
Q ss_pred ccCceEEEeecCC------------ccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEec-cccCC
Q 022411 5 KMQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSI-SSSHE 71 (297)
Q Consensus 5 ~~~~~VLll~~~~------------~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~-~~~~~ 71 (297)
+.+.+||-+-.|+ .++..|+++.|++.++++. .++.++.+++..+++++++||+|++. ..+++
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~----~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~ 120 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQDF----PEARWVVGDLSVDQISETDFDLIVSAGNVMGF 120 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----TTSEEEECCTTTSCCCCCCEEEEEECCCCGGG
T ss_pred cCCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHHhC----CCCcEEEcccccCCCCCCceeEEEECCcHHhh
Confidence 3456777775443 3445566778888877653 45889999999999888999999998 56777
Q ss_pred CC---hHHHHHHHHhcccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCcccccc
Q 022411 72 LP---GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQR 125 (297)
Q Consensus 72 ~~---~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~~ 125 (297)
++ ...++.++.++|+|||++++..+..... ....+...+..+||..+..
T Consensus 121 ~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~-----~~~~~~~~l~~~Gf~~~~~ 172 (195)
T 3cgg_A 121 LAEDGREPALANIHRALGADGRAVIGFGAGRGW-----VFGDFLEVAERVGLELENA 172 (195)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEETTSSC-----CHHHHHHHHHHHTEEEEEE
T ss_pred cChHHHHHHHHHHHHHhCCCCEEEEEeCCCCCc-----CHHHHHHHHHHcCCEEeee
Confidence 65 3789999999999999999887653211 1236777888999987654
No 73
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.37 E-value=3.5e-07 Score=77.92 Aligned_cols=93 Identities=24% Similarity=0.295 Sum_probs=72.1
Q ss_pred ccCceEEEeecCC-------------ccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEeccccCC
Q 022411 5 KMQSAVLALSEDK-------------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHE 71 (297)
Q Consensus 5 ~~~~~VLll~~~~-------------~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~ 71 (297)
+.+.+||-+--|+ .++..|+++.|++.++++... ..++.++.+++..+++++++||+|++...+++
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~-~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~ 119 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH-VPQLRWETMDVRKLDFPSASFDVVLEKGTLDA 119 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT-CTTCEEEECCTTSCCSCSSCEEEEEEESHHHH
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc-CCCcEEEEcchhcCCCCCCcccEEEECcchhh
Confidence 4456777774443 344567788999998876543 46899999999999999999999998765543
Q ss_pred CC----------------hHHHHHHHHhcccCCcEEEEEecCC
Q 022411 72 LP----------------GDQLLEEISRVLKPGGTILIYKKLT 98 (297)
Q Consensus 72 ~~----------------~~~~L~ei~RvLKPGG~l~i~~~~~ 98 (297)
+. ...++.++.|+|||||++++.++..
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 120 LLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp HTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred hccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 21 3789999999999999999998754
No 74
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.36 E-value=5.5e-07 Score=82.82 Aligned_cols=106 Identities=19% Similarity=0.198 Sum_probs=78.9
Q ss_pred cChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCCCCCCCcccEEEeccccCCCC-h--HHHHHHHHhcccCCcEEEE
Q 022411 19 LPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSHELP-G--DQLLEEISRVLKPGGTILI 93 (297)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~-~--~~~L~ei~RvLKPGG~l~i 93 (297)
++..|++ .|++.|+++.... ..++.++.+|+...+++.. ||+|++...+|+++ . ..++++++++|||||++++
T Consensus 192 ~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i 269 (335)
T 2r3s_A 192 IFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGND-YDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIV 269 (335)
T ss_dssp EEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSC-EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCCC-CcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEE
Confidence 3455667 8888888776443 3469999999988887765 99999999999886 2 6899999999999999999
Q ss_pred EecCCCCc--cchH-----------------HHHHHHHHHHHHCCcccccch
Q 022411 94 YKKLTSDK--GDVD-----------------KAISALEGKLLLAGFLDAQRI 126 (297)
Q Consensus 94 ~~~~~~~~--g~~~-----------------~~~~~l~~~L~laGFv~v~~~ 126 (297)
.++..... .... ...+++...+..+||..++..
T Consensus 270 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~~~~ 321 (335)
T 2r3s_A 270 FDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHSQLH 321 (335)
T ss_dssp EECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEEEEE
T ss_pred EeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCeeeEE
Confidence 98764321 1110 013467778889999877654
No 75
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.36 E-value=7.5e-07 Score=84.04 Aligned_cols=103 Identities=14% Similarity=0.215 Sum_probs=76.7
Q ss_pred hHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCCCCCCCcccEEEeccccCCCCh-H--HHHHHHHhcccCCcEEEEEe
Q 022411 21 VSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSHELPG-D--QLLEEISRVLKPGGTILIYK 95 (297)
Q Consensus 21 ~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~~-~--~~L~ei~RvLKPGG~l~i~~ 95 (297)
..|+ +.|++.|+++.... ..++.++.+|+. .|++. .||+|++...+|+++. . .+|++++++|||||+|+|.+
T Consensus 231 ~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p~-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e 307 (369)
T 3gwz_A 231 LLER-PPVAEEARELLTGRGLADRCEILPGDFF-ETIPD-GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVID 307 (369)
T ss_dssp EEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCCS-SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred EEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CCCCC-CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 4466 77888888766443 467999999997 56666 8999999999999883 2 69999999999999999988
Q ss_pred cCCCCccchH----------------HHHHHHHHHHHHCCcccccch
Q 022411 96 KLTSDKGDVD----------------KAISALEGKLLLAGFLDAQRI 126 (297)
Q Consensus 96 ~~~~~~g~~~----------------~~~~~l~~~L~laGFv~v~~~ 126 (297)
.......... .+.+++...|..+||..++..
T Consensus 308 ~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~ 354 (369)
T 3gwz_A 308 NLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLRVERSL 354 (369)
T ss_dssp EBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEEEEEE
T ss_pred eccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeEEEEE
Confidence 6533211110 013567778888999887654
No 76
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.36 E-value=5.2e-07 Score=77.89 Aligned_cols=79 Identities=10% Similarity=0.069 Sum_probs=66.0
Q ss_pred ccChHHHHHHHHHHHHHHhhhcC------CCeEEEEccCCCCCCCCCcccEEEeccccCCCC-h--HHHHHHHHhcccCC
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQCD------PQIITQASSLSQLPVESFSIDTVLSISSSHELP-G--DQLLEEISRVLKPG 88 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~------~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~-~--~~~L~ei~RvLKPG 88 (297)
.++..|+++.|++.|++++.... .++.++.+++..+++++++||+|++..++++++ + ..+++++.|+||||
T Consensus 55 ~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg 134 (217)
T 3jwh_A 55 QITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPK 134 (217)
T ss_dssp EEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCS
T ss_pred EEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCC
Confidence 55567888999999988764321 279999999998888889999999999999998 4 68999999999999
Q ss_pred cEEEEEec
Q 022411 89 GTILIYKK 96 (297)
Q Consensus 89 G~l~i~~~ 96 (297)
|.+++...
T Consensus 135 G~li~~~~ 142 (217)
T 3jwh_A 135 IVIVTTPN 142 (217)
T ss_dssp EEEEEEEB
T ss_pred EEEEEccC
Confidence 97776643
No 77
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=98.36 E-value=1.1e-06 Score=75.24 Aligned_cols=111 Identities=9% Similarity=0.032 Sum_probs=80.8
Q ss_pred ccCceEEEeecCC--------------ccChHHHHHHHHHHHHHHhhhc-CCCeEEEEccCCCCCCCCCcccEEEecccc
Q 022411 5 KMQSAVLALSEDK--------------ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVESFSIDTVLSISSS 69 (297)
Q Consensus 5 ~~~~~VLll~~~~--------------~vt~~dlse~m~~~A~~~~~~~-~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~ 69 (297)
+.+.+||-+--|+ .++..|+++.|++.|++++... ..++.++.+++........+||+|++....
T Consensus 39 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~ 118 (204)
T 3e05_A 39 QDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGSG 118 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCCSEEEESCCT
T ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCCCEEEECCCC
Confidence 3456677665443 3445577889999998876543 367999999996554444789999998765
Q ss_pred CCCChHHHHHHHHhcccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCcccccc
Q 022411 70 HELPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQR 125 (297)
Q Consensus 70 ~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~~ 125 (297)
+ ....++.++.++|||||++++..... .....+...+..+|| +++.
T Consensus 119 ~--~~~~~l~~~~~~LkpgG~l~~~~~~~-------~~~~~~~~~l~~~g~-~~~~ 164 (204)
T 3e05_A 119 G--MLEEIIDAVDRRLKSEGVIVLNAVTL-------DTLTKAVEFLEDHGY-MVEV 164 (204)
T ss_dssp T--CHHHHHHHHHHHCCTTCEEEEEECBH-------HHHHHHHHHHHHTTC-EEEE
T ss_pred c--CHHHHHHHHHHhcCCCeEEEEEeccc-------ccHHHHHHHHHHCCC-ceeE
Confidence 4 45789999999999999999976542 233467778899999 5443
No 78
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.34 E-value=5.5e-07 Score=77.72 Aligned_cols=80 Identities=13% Similarity=0.042 Sum_probs=65.8
Q ss_pred CccChHHHHHHHHHHHHHHhhhc-C-----CCeEEEEccCCCCCCCCCcccEEEeccccCCCC-h--HHHHHHHHhcccC
Q 022411 17 KILPVSAVLNAIRDLGDEAVEQC-D-----PQIITQASSLSQLPVESFSIDTVLSISSSHELP-G--DQLLEEISRVLKP 87 (297)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~-~-----~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~-~--~~~L~ei~RvLKP 87 (297)
..++..|+++.|++.|+++.... . .++.++.+++..+++++++||+|++..++++++ + ..+++++.|+|||
T Consensus 54 ~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~Lkp 133 (219)
T 3jwg_A 54 EQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRP 133 (219)
T ss_dssp CEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCC
T ss_pred CEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCC
Confidence 35556788899999998875432 1 289999999999998889999999999999998 3 5899999999999
Q ss_pred CcEEEEEec
Q 022411 88 GGTILIYKK 96 (297)
Q Consensus 88 GG~l~i~~~ 96 (297)
||.+++...
T Consensus 134 gG~~i~~~~ 142 (219)
T 3jwg_A 134 QTVIVSTPN 142 (219)
T ss_dssp SEEEEEEEB
T ss_pred CEEEEEccc
Confidence 997765543
No 79
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.34 E-value=9.2e-07 Score=76.79 Aligned_cols=86 Identities=13% Similarity=0.166 Sum_probs=66.2
Q ss_pred cCceEEEeecCCc------------cChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEecc-ccCCC
Q 022411 6 MQSAVLALSEDKI------------LPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSIS-SSHEL 72 (297)
Q Consensus 6 ~~~~VLll~~~~~------------vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~-~~~~~ 72 (297)
.+.+||-+--|+. ++..|+++.|++.|+++. .++.++.+++..+++ +++||+|++.. +++|+
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~----~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~ 114 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARKRL----PDATLHQGDMRDFRL-GRKFSAVVSMFSSVGYL 114 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHHHC----TTCEEEECCTTTCCC-SSCEEEEEECTTGGGGC
T ss_pred CCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhC----CCCEEEECCHHHccc-CCCCcEEEEcCchHhhc
Confidence 4567777755543 344566788888887653 568999999999887 77999999544 77777
Q ss_pred C----hHHHHHHHHhcccCCcEEEEEec
Q 022411 73 P----GDQLLEEISRVLKPGGTILIYKK 96 (297)
Q Consensus 73 ~----~~~~L~ei~RvLKPGG~l~i~~~ 96 (297)
+ ...++++++++|||||++++.++
T Consensus 115 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (239)
T 3bxo_A 115 KTTEELGAAVASFAEHLEPGGVVVVEPW 142 (239)
T ss_dssp CSHHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 4 36899999999999999998754
No 80
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.32 E-value=1.4e-06 Score=75.39 Aligned_cols=99 Identities=15% Similarity=0.019 Sum_probs=74.4
Q ss_pred cChHHHHHHHHHHHHHHhhhc-CCCeEEEEccCCCCC--CCCCcccEEEeccccCCCC---------hHHHHHHHHhccc
Q 022411 19 LPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLP--VESFSIDTVLSISSSHELP---------GDQLLEEISRVLK 86 (297)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~-~~~v~~~~~d~~~Lp--~~d~sfD~Vls~~~~~~~~---------~~~~L~ei~RvLK 86 (297)
++..|+++.|++.|++++... ..++.++.+++..++ +++++||+|++++...|.. ...++.++.++||
T Consensus 68 v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk 147 (214)
T 1yzh_A 68 YIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILP 147 (214)
T ss_dssp EEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSC
T ss_pred EEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcC
Confidence 345577889999998876544 368999999999887 7889999999987655432 1579999999999
Q ss_pred CCcEEEEEecCCCCccchHHHHHHHHHHHHHCCccccc
Q 022411 87 PGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQ 124 (297)
Q Consensus 87 PGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~ 124 (297)
|||.|++..... .....+...+..+||..+.
T Consensus 148 pgG~l~~~~~~~-------~~~~~~~~~~~~~g~~~~~ 178 (214)
T 1yzh_A 148 ENGEIHFKTDNR-------GLFEYSLVSFSQYGMKLNG 178 (214)
T ss_dssp TTCEEEEEESCH-------HHHHHHHHHHHHHTCEEEE
T ss_pred CCcEEEEEeCCH-------HHHHHHHHHHHHCCCeeee
Confidence 999999875321 1123555667778997654
No 81
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=98.32 E-value=9e-07 Score=82.20 Aligned_cols=89 Identities=9% Similarity=0.109 Sum_probs=70.9
Q ss_pred cccCceEEEeecCC--------------ccChHHHHHHHHHHHHHHhhhc-CCCeEEEEccCCCCCCCCCcccEEEeccc
Q 022411 4 GKMQSAVLALSEDK--------------ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVESFSIDTVLSISS 68 (297)
Q Consensus 4 ~~~~~~VLll~~~~--------------~vt~~dlse~m~~~A~~~~~~~-~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~ 68 (297)
++.|.+||.|-.|+ .|+..|++++|++.|+++++.. ..++.++++++..+| +++||+|++...
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--d~~FDvV~~~a~ 197 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID--GLEFDVLMVAAL 197 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG--GCCCSEEEECTT
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC--CCCcCEEEECCC
Confidence 46678888887664 2334578899999999887543 368999999998876 789999997653
Q ss_pred cCCCC-hHHHHHHHHhcccCCcEEEEEecC
Q 022411 69 SHELP-GDQLLEEISRVLKPGGTILIYKKL 97 (297)
Q Consensus 69 ~~~~~-~~~~L~ei~RvLKPGG~l~i~~~~ 97 (297)
.+ ...++++++|+|||||+|++.+..
T Consensus 198 ---~~d~~~~l~el~r~LkPGG~Lvv~~~~ 224 (298)
T 3fpf_A 198 ---AEPKRRVFRNIHRYVDTETRIIYRTYT 224 (298)
T ss_dssp ---CSCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred ---ccCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence 34 678999999999999999998753
No 82
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.28 E-value=9e-07 Score=82.31 Aligned_cols=117 Identities=16% Similarity=0.207 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCCC-CCCCcccEEEeccccCCCCh---HHHHHHHHhcccCCcEEEEEe
Q 022411 22 SAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLP-VESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIYK 95 (297)
Q Consensus 22 ~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~Lp-~~d~sfD~Vls~~~~~~~~~---~~~L~ei~RvLKPGG~l~i~~ 95 (297)
.|+ +.|++.|+++.... ..++.++.+|+...+ +....||+|++...+|+++. ..++++++++|||||+|+|.+
T Consensus 209 ~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (352)
T 3mcz_A 209 WDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILT 287 (352)
T ss_dssp EEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 344 55777777765443 346999999998775 23456999999999998883 689999999999999999988
Q ss_pred cCCCCc--cchH-----------------HHHHHHHHHHHHCCcccccchhccccCccceeEeeeeecCCC
Q 022411 96 KLTSDK--GDVD-----------------KAISALEGKLLLAGFLDAQRIQLKSVVPAEVVSFGVKGKKPT 147 (297)
Q Consensus 96 ~~~~~~--g~~~-----------------~~~~~l~~~L~laGFv~v~~~~~kp~~~~~~~~~~i~akKP~ 147 (297)
...... .+.. .+.+++...|..+||..++... .. ...+.++||+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~------g~--~~l~~a~kp~ 350 (352)
T 3mcz_A 288 MTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAVGERSI------GR--YTLLIGQRSS 350 (352)
T ss_dssp ECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCEEEEEEE------TT--EEEEEEECCC
T ss_pred eccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCceeeecc------Cc--eEEEEEecCC
Confidence 642211 1100 1134677889999999876321 11 2246677874
No 83
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.28 E-value=6.6e-07 Score=80.60 Aligned_cols=80 Identities=14% Similarity=0.065 Sum_probs=66.7
Q ss_pred CccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEeccccCCCC-h--HHHHHHHHhcccCCcEEEE
Q 022411 17 KILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP-G--DQLLEEISRVLKPGGTILI 93 (297)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~-~--~~~L~ei~RvLKPGG~l~i 93 (297)
..++..|+++.|++.+++++.....++.++.+|+..+++ +++||+|++..++||++ . ..+++++.++|||||.+++
T Consensus 143 ~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 221 (286)
T 3m70_A 143 YDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANI-QENYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLI 221 (286)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC-CSCEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEE
T ss_pred CeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccc-cCCccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 345566888999999988776554589999999999887 78999999999999886 2 5899999999999999877
Q ss_pred EecC
Q 022411 94 YKKL 97 (297)
Q Consensus 94 ~~~~ 97 (297)
....
T Consensus 222 ~~~~ 225 (286)
T 3m70_A 222 VAAM 225 (286)
T ss_dssp EEEB
T ss_pred EEec
Confidence 6543
No 84
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.27 E-value=5.3e-07 Score=77.18 Aligned_cols=132 Identities=11% Similarity=-0.003 Sum_probs=86.8
Q ss_pred ccCceEEEeecCC-------------ccChHHHHHHHHHHHHHHhhhc-CCCeEEEEccCCCCCCCCCcccEEEeccccC
Q 022411 5 KMQSAVLALSEDK-------------ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVESFSIDTVLSISSSH 70 (297)
Q Consensus 5 ~~~~~VLll~~~~-------------~vt~~dlse~m~~~A~~~~~~~-~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~ 70 (297)
+.+.+||-+--|+ .++..|+++.|++.|+++.... ..++.+..+|+... .+++||+|++...++
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~--~~~~fD~i~~~~~~~ 136 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLAD--VDGKFDLIVANILAE 136 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTT--CCSCEEEEEEESCHH
T ss_pred cCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecccccc--CCCCceEEEECCcHH
Confidence 3455676664443 3446678889999998876544 33499999999764 368999999987665
Q ss_pred CCChHHHHHHHHhcccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCcccccchhccccCccceeEeeeeecCCCCCC
Q 022411 71 ELPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQRIQLKSVVPAEVVSFGVKGKKPTWKI 150 (297)
Q Consensus 71 ~~~~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~~~~~kp~~~~~~~~~~i~akKP~~~~ 150 (297)
+ ...+++++.++|||||++++...... ....+...+..+||..+..... ... ...++.++|..+.
T Consensus 137 ~--~~~~l~~~~~~L~~gG~l~~~~~~~~-------~~~~~~~~~~~~Gf~~~~~~~~-----~~w-~~~~~~~~~~~~~ 201 (205)
T 3grz_A 137 I--LLDLIPQLDSHLNEDGQVIFSGIDYL-------QLPKIEQALAENSFQIDLKMRA-----GRW-IGLAISRKHEGHH 201 (205)
T ss_dssp H--HHHHGGGSGGGEEEEEEEEEEEEEGG-------GHHHHHHHHHHTTEEEEEEEEE-----TTE-EEEEEEECC----
T ss_pred H--HHHHHHHHHHhcCCCCEEEEEecCcc-------cHHHHHHHHHHcCCceEEeecc-----CCE-EEEEEeccccccc
Confidence 4 36789999999999999999765431 1236777888999987654321 222 2235556776665
Q ss_pred CCc
Q 022411 151 GSS 153 (297)
Q Consensus 151 gs~ 153 (297)
+++
T Consensus 202 ~~~ 204 (205)
T 3grz_A 202 HHH 204 (205)
T ss_dssp ---
T ss_pred ccC
Confidence 543
No 85
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.25 E-value=2.4e-06 Score=74.82 Aligned_cols=116 Identities=19% Similarity=0.163 Sum_probs=77.9
Q ss_pred ccCceEEEeecCCcc--------------ChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCC----CCCCCCcccEEEec
Q 022411 5 KMQSAVLALSEDKIL--------------PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQ----LPVESFSIDTVLSI 66 (297)
Q Consensus 5 ~~~~~VLll~~~~~v--------------t~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~----Lp~~d~sfD~Vls~ 66 (297)
+.+.+||-|--|+.. +..|+++.|++.+++++... .++.++.+++.. +++. .+||+|+.
T Consensus 73 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~~~~~~~~~-~~~D~v~~- 149 (230)
T 1fbn_A 73 KRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER-ENIIPILGDANKPQEYANIV-EKVDVIYE- 149 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC-TTEEEEECCTTCGGGGTTTS-CCEEEEEE-
T ss_pred CCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC-CCeEEEECCCCCcccccccC-ccEEEEEE-
Confidence 346677877655433 34466788888888775443 789999999988 7777 78999993
Q ss_pred cccCCCC-h---HHHHHHHHhcccCCcEEEEEecC-CCCcc-chHHH-HHHHHHHHHHCCcccccchhc
Q 022411 67 SSSHELP-G---DQLLEEISRVLKPGGTILIYKKL-TSDKG-DVDKA-ISALEGKLLLAGFLDAQRIQL 128 (297)
Q Consensus 67 ~~~~~~~-~---~~~L~ei~RvLKPGG~l~i~~~~-~~~~g-~~~~~-~~~l~~~L~laGFv~v~~~~~ 128 (297)
+++ + ..++.++.|+|||||++++.... ..... ..... .+++. .|..+||..++....
T Consensus 150 ----~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~~~~~~ 213 (230)
T 1fbn_A 150 ----DVAQPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGGFKIVDEVDI 213 (230)
T ss_dssp ----CCCSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEEEEEEC
T ss_pred ----ecCChhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCCCEEEEEEcc
Confidence 333 3 67799999999999999986211 11111 11111 13555 778889987665443
No 86
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.25 E-value=1.3e-06 Score=76.02 Aligned_cols=99 Identities=12% Similarity=0.027 Sum_probs=72.6
Q ss_pred ccChHHHHHHHHHHHHHHhhhc-CCCeEEEEccCCCCC--CCCCcccEEEeccccCCCC---------hHHHHHHHHhcc
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLP--VESFSIDTVLSISSSHELP---------GDQLLEEISRVL 85 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~-~~~v~~~~~d~~~Lp--~~d~sfD~Vls~~~~~~~~---------~~~~L~ei~RvL 85 (297)
.++..|+++.|++.|+++++.. ..++.++.+|+..++ +++++||.|++++...|.. ...++.++.|+|
T Consensus 64 ~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~L 143 (213)
T 2fca_A 64 NYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVM 143 (213)
T ss_dssp EEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHH
T ss_pred CEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHc
Confidence 3445678889999998877554 467999999998876 7789999999877544432 257899999999
Q ss_pred cCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCcccc
Q 022411 86 KPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDA 123 (297)
Q Consensus 86 KPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v 123 (297)
||||.|++..... .....+...+..+||...
T Consensus 144 kpgG~l~~~td~~-------~~~~~~~~~~~~~g~~~~ 174 (213)
T 2fca_A 144 GKGGSIHFKTDNR-------GLFEYSLKSFSEYGLLLT 174 (213)
T ss_dssp TTSCEEEEEESCH-------HHHHHHHHHHHHHTCEEE
T ss_pred CCCCEEEEEeCCH-------HHHHHHHHHHHHCCCccc
Confidence 9999999876321 112244455667788654
No 87
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.24 E-value=9.6e-06 Score=72.14 Aligned_cols=71 Identities=7% Similarity=-0.049 Sum_probs=55.6
Q ss_pred HHHHHHHHhhhcC--CCeEEEEcc---CCCCCCCCCcccEEEeccccCCCC-hHHHHHHHHhcccCCcEEEEEecCC
Q 022411 28 IRDLGDEAVEQCD--PQIITQASS---LSQLPVESFSIDTVLSISSSHELP-GDQLLEEISRVLKPGGTILIYKKLT 98 (297)
Q Consensus 28 m~~~A~~~~~~~~--~~v~~~~~d---~~~Lp~~d~sfD~Vls~~~~~~~~-~~~~L~ei~RvLKPGG~l~i~~~~~ 98 (297)
|++.|+++..... .++.++.++ ...+|+++++||+|++...+++++ +..+++.+.++++|||++++.++..
T Consensus 86 ~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~ 162 (275)
T 3bkx_A 86 TLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSM 162 (275)
T ss_dssp CHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECS
T ss_pred HHHHHHHHHHhcCCCCceEEEECChhhhccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence 7888887665432 579999998 567788899999999999999988 5566666666666699999987653
No 88
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.22 E-value=1.3e-06 Score=79.42 Aligned_cols=79 Identities=11% Similarity=0.207 Sum_probs=64.4
Q ss_pred cChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCC-----------CCCCcccEEEeccccCCCC---hHHHHHHHHhc
Q 022411 19 LPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLP-----------VESFSIDTVLSISSSHELP---GDQLLEEISRV 84 (297)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp-----------~~d~sfD~Vls~~~~~~~~---~~~~L~ei~Rv 84 (297)
|+..|+++.|+++|++++.. ..++.++.+|+...+ ++..+||+|++..++||++ ...++++++|+
T Consensus 107 v~~vD~sp~~l~~Ar~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~ 185 (274)
T 2qe6_A 107 VVYVDIDPMVLTHGRALLAK-DPNTAVFTADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDA 185 (274)
T ss_dssp EEEEESSHHHHHHHHHHHTT-CTTEEEEECCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHH
T ss_pred EEEEECChHHHHHHHHhcCC-CCCeEEEEeeCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHh
Confidence 34557789999999987633 467999999997531 3345899999999999987 47899999999
Q ss_pred ccCCcEEEEEecCC
Q 022411 85 LKPGGTILIYKKLT 98 (297)
Q Consensus 85 LKPGG~l~i~~~~~ 98 (297)
|||||+|++.+...
T Consensus 186 L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 186 LAPGSYLFMTSLVD 199 (274)
T ss_dssp SCTTCEEEEEEEBC
T ss_pred CCCCcEEEEEEecC
Confidence 99999999998765
No 89
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.20 E-value=1.4e-06 Score=76.86 Aligned_cols=112 Identities=12% Similarity=0.003 Sum_probs=81.1
Q ss_pred cCceEEEeecCCc--------------cChHHHHHHHHHHHHHHhhhc-CCCeEEEEccCCCCCCC---CCcccEEEecc
Q 022411 6 MQSAVLALSEDKI--------------LPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVE---SFSIDTVLSIS 67 (297)
Q Consensus 6 ~~~~VLll~~~~~--------------vt~~dlse~m~~~A~~~~~~~-~~~v~~~~~d~~~Lp~~---d~sfD~Vls~~ 67 (297)
.+.+||-|-.|+. ++..|+++.|++.|++++... ..++.++.++++.+++. +++||+|++..
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~ 149 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTARA 149 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEEC
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEec
Confidence 4556777655543 334477789999998876554 34799999999888764 67999999876
Q ss_pred ccCCCChHHHHHHHHhcccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCcccccc
Q 022411 68 SSHELPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQR 125 (297)
Q Consensus 68 ~~~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~~ 125 (297)
. .....++.++.++|||||+|++..... .......+...+..+||.....
T Consensus 150 ~---~~~~~~l~~~~~~LkpgG~l~~~~g~~-----~~~~~~~~~~~l~~~g~~~~~~ 199 (240)
T 1xdz_A 150 V---ARLSVLSELCLPLVKKNGLFVALKAAS-----AEEELNAGKKAITTLGGELENI 199 (240)
T ss_dssp C---SCHHHHHHHHGGGEEEEEEEEEEECC------CHHHHHHHHHHHHHTTEEEEEE
T ss_pred c---CCHHHHHHHHHHhcCCCCEEEEEeCCC-----chHHHHHHHHHHHHcCCeEeEE
Confidence 2 236789999999999999999875321 1223345667788899976543
No 90
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.20 E-value=3.6e-06 Score=78.68 Aligned_cols=105 Identities=15% Similarity=0.173 Sum_probs=75.7
Q ss_pred ChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCCCCCCCcccEEEeccccCCCC---hHHHHHHHHhcccCCcEEEEE
Q 022411 20 PVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSHELP---GDQLLEEISRVLKPGGTILIY 94 (297)
Q Consensus 20 t~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~---~~~~L~ei~RvLKPGG~l~i~ 94 (297)
+..|+ +.|++.|+++.... ..++.++.+|+...|+++. |+|++...+|+++ ...++++++++|||||+|+|.
T Consensus 218 ~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~--D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~ 294 (359)
T 1x19_A 218 TILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEA--DAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLIL 294 (359)
T ss_dssp EEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCC--SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred EEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCCC--CEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 34466 77888888776543 3459999999998887654 9999999999887 377899999999999999998
Q ss_pred ecCCCCc-cc-h--------------H----HHHHHHHHHHHHCCcccccchh
Q 022411 95 KKLTSDK-GD-V--------------D----KAISALEGKLLLAGFLDAQRIQ 127 (297)
Q Consensus 95 ~~~~~~~-g~-~--------------~----~~~~~l~~~L~laGFv~v~~~~ 127 (297)
+...... .. . . ...+++...+..+||..++...
T Consensus 295 e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll~~aGf~~v~~~~ 347 (359)
T 1x19_A 295 DMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYKEILESLGYKDVTMVR 347 (359)
T ss_dssp EECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHHHHHTCEEEEEEE
T ss_pred ecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHHHHHHHCCCceEEEEe
Confidence 8542110 00 0 0 1223667778888998766543
No 91
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.20 E-value=1.7e-06 Score=79.84 Aligned_cols=103 Identities=12% Similarity=0.128 Sum_probs=74.0
Q ss_pred hHHHHHHHHHHHHHHhhh--cCCCeEEEEccCCCCCCCCCcccEEEeccccCCCC-hH--HHHHHHHhcccCCcEEEEEe
Q 022411 21 VSAVLNAIRDLGDEAVEQ--CDPQIITQASSLSQLPVESFSIDTVLSISSSHELP-GD--QLLEEISRVLKPGGTILIYK 95 (297)
Q Consensus 21 ~~dlse~m~~~A~~~~~~--~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~-~~--~~L~ei~RvLKPGG~l~i~~ 95 (297)
..|+ +.|++.|+++... ...++.++.+|+.. +++ ..||+|++...+|+++ .. .++++++++|||||+|+|.+
T Consensus 196 ~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 272 (334)
T 2ip2_A 196 MLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP-SNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIE 272 (334)
T ss_dssp EEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-SSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-CCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 4455 6677888776543 24679999999977 666 6799999999999877 33 89999999999999999998
Q ss_pred cCCCCcc-chH----------------HHHHHHHHHHHHCCcccccch
Q 022411 96 KLTSDKG-DVD----------------KAISALEGKLLLAGFLDAQRI 126 (297)
Q Consensus 96 ~~~~~~g-~~~----------------~~~~~l~~~L~laGFv~v~~~ 126 (297)
......+ ... .+.+++...+..+||..++..
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~ 320 (334)
T 2ip2_A 273 RTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVERIV 320 (334)
T ss_dssp CCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEE
T ss_pred eccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCceeEEE
Confidence 6522111 110 013466777888888876654
No 92
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.20 E-value=2.3e-06 Score=80.10 Aligned_cols=104 Identities=13% Similarity=0.191 Sum_probs=74.0
Q ss_pred hHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCCCCCCCcccEEEeccccCCCC-h--HHHHHHHHhcccCCcEEEEEe
Q 022411 21 VSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSHELP-G--DQLLEEISRVLKPGGTILIYK 95 (297)
Q Consensus 21 ~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~-~--~~~L~ei~RvLKPGG~l~i~~ 95 (297)
..|+ +.|++.|+++.... ..++.++.+|+.. +++. .||+|++...+|+++ . ..++++++++|||||+|+|.+
T Consensus 211 ~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (374)
T 1qzz_A 211 LVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLPV-TADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLD 287 (374)
T ss_dssp EEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSC-CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCC-CCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 4466 78899988876543 3479999999865 4444 399999999999888 3 389999999999999999988
Q ss_pred c--CC-CCccc-hH---------------HHHHHHHHHHHHCCcccccchh
Q 022411 96 K--LT-SDKGD-VD---------------KAISALEGKLLLAGFLDAQRIQ 127 (297)
Q Consensus 96 ~--~~-~~~g~-~~---------------~~~~~l~~~L~laGFv~v~~~~ 127 (297)
. .. ..... .. ...+++...|..+||..++...
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~~~ 338 (374)
T 1qzz_A 288 RADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLALASERT 338 (374)
T ss_dssp CCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEEEEEEE
T ss_pred chhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCceEEEEE
Confidence 7 32 11000 00 0234667788889998776544
No 93
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=98.19 E-value=1e-06 Score=74.03 Aligned_cols=93 Identities=13% Similarity=0.018 Sum_probs=66.9
Q ss_pred ccCceEEEeecCC------------ccChHHHHHHHHHHHHHHhhhc-CCCeEEEEccCCCCC-CCCCcccEEEeccccC
Q 022411 5 KMQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLP-VESFSIDTVLSISSSH 70 (297)
Q Consensus 5 ~~~~~VLll~~~~------------~vt~~dlse~m~~~A~~~~~~~-~~~v~~~~~d~~~Lp-~~d~sfD~Vls~~~~~ 70 (297)
+.|.+||-+--|+ .|+..|+++.|++.|++++... ..++.++.++...++ +.+++||+|+++..+.
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~~ 100 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGYL 100 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC--
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCCC
Confidence 4566777665443 4556688999999999877543 368999998887754 5578999998874322
Q ss_pred CC--------C--hHHHHHHHHhcccCCcEEEEEecC
Q 022411 71 EL--------P--GDQLLEEISRVLKPGGTILIYKKL 97 (297)
Q Consensus 71 ~~--------~--~~~~L~ei~RvLKPGG~l~i~~~~ 97 (297)
+. + ...++.+++|+|||||++++..+.
T Consensus 101 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 101 PSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp ---------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred CCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 21 1 357889999999999999988764
No 94
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.18 E-value=1.2e-05 Score=75.40 Aligned_cols=115 Identities=23% Similarity=0.242 Sum_probs=80.1
Q ss_pred HHHHHHHHHHhhh-cCCCeEEEEccCCCCCCCCCcccEEEeccccCCCCh---HHHHHHHHhcccCCcEEEEEecCCCC-
Q 022411 26 NAIRDLGDEAVEQ-CDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIYKKLTSD- 100 (297)
Q Consensus 26 e~m~~~A~~~~~~-~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~~---~~~L~ei~RvLKPGG~l~i~~~~~~~- 100 (297)
+.+++.|++..+. ...+|+++.+|+...|++ .+|+|+....+|.++. ..+|++++++|+|||+|+|.+..-..
T Consensus 212 p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~--~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~ 289 (353)
T 4a6d_A 212 PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLP--EADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDED 289 (353)
T ss_dssp HHHHHHHHHHSCC--CCSEEEEESCTTTSCCC--CCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTT
T ss_pred HHHHHHHHHhhhhcccCceeeecCccccCCCC--CceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCC
Confidence 4567777765433 356899999999766654 4799999999998883 47899999999999999999865221
Q ss_pred -ccchHH----------------HHHHHHHHHHHCCcccccchhccccCccceeEeeeeecCCCC
Q 022411 101 -KGDVDK----------------AISALEGKLLLAGFLDAQRIQLKSVVPAEVVSFGVKGKKPTW 148 (297)
Q Consensus 101 -~g~~~~----------------~~~~l~~~L~laGFv~v~~~~~kp~~~~~~~~~~i~akKP~~ 148 (297)
.++... +.+++...|..+||..++...... .. + .|.|+|.+.
T Consensus 290 ~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~~v~v~~~~~----~~-~-~i~ArKgt~ 348 (353)
T 4a6d_A 290 RRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQFKKTGA----IY-D-AILARKGTH 348 (353)
T ss_dssp SCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCEEEEEECCSS----SC-E-EEEEECCCC
T ss_pred CCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCceEEEEEcCC----ce-E-EEEEEecCc
Confidence 111111 235778889999999887654221 11 1 366777654
No 95
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.16 E-value=1.2e-06 Score=80.20 Aligned_cols=92 Identities=16% Similarity=0.086 Sum_probs=70.0
Q ss_pred cCceEEEeecCCc-------------cChHHHHHHHHHHHHHHhhh--------cCCCeEEEEccCCCCC----CC--CC
Q 022411 6 MQSAVLALSEDKI-------------LPVSAVLNAIRDLGDEAVEQ--------CDPQIITQASSLSQLP----VE--SF 58 (297)
Q Consensus 6 ~~~~VLll~~~~~-------------vt~~dlse~m~~~A~~~~~~--------~~~~v~~~~~d~~~Lp----~~--d~ 58 (297)
.+.+||-|--|+. ++..|+++.|++.|+++... ...++.++++|+..++ ++ ++
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQM 113 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTC
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCC
Confidence 4556777754432 33446778999998876543 2347899999999886 64 45
Q ss_pred cccEEEeccccCCC--C---hHHHHHHHHhcccCCcEEEEEecC
Q 022411 59 SIDTVLSISSSHEL--P---GDQLLEEISRVLKPGGTILIYKKL 97 (297)
Q Consensus 59 sfD~Vls~~~~~~~--~---~~~~L~ei~RvLKPGG~l~i~~~~ 97 (297)
+||+|++..++||+ + ...++.++.|+|||||.|++..+.
T Consensus 114 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 114 CFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp CEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 99999999999997 2 368999999999999999998764
No 96
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.15 E-value=1.6e-06 Score=75.79 Aligned_cols=103 Identities=13% Similarity=0.120 Sum_probs=76.2
Q ss_pred cCceEEEeecCC------------ccChHHHHHHHHHHHHHHhhhcCCCeEEEEccC-CCCCCC-CCcccEEEeccccCC
Q 022411 6 MQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSL-SQLPVE-SFSIDTVLSISSSHE 71 (297)
Q Consensus 6 ~~~~VLll~~~~------------~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~-~~Lp~~-d~sfD~Vls~~~~~~ 71 (297)
.+.+||-+--|+ .++..|+++.|++.++++ ..++.++++++ +.+|++ +++||+|++..
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~----~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~---- 119 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARAN----APHADVYEWNGKGELPAGLGAPFGLIVSRR---- 119 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHH----CTTSEEEECCSCSSCCTTCCCCEEEEEEES----
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHh----CCCceEEEcchhhccCCcCCCCEEEEEeCC----
Confidence 455666664443 445668888999998875 56799999999 688998 89999999872
Q ss_pred CChHHHHHHHHhcccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCcccccc
Q 022411 72 LPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQR 125 (297)
Q Consensus 72 ~~~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~~ 125 (297)
....++++++|+|||||+|+...... .. ..+...+..+||..+..
T Consensus 120 -~~~~~l~~~~~~LkpgG~l~~~~~~~----~~----~~~~~~l~~~Gf~~~~~ 164 (226)
T 3m33_A 120 -GPTSVILRLPELAAPDAHFLYVGPRL----NV----PEVPERLAAVGWDIVAE 164 (226)
T ss_dssp -CCSGGGGGHHHHEEEEEEEEEEESSS----CC----THHHHHHHHTTCEEEEE
T ss_pred -CHHHHHHHHHHHcCCCcEEEEeCCcC----CH----HHHHHHHHHCCCeEEEE
Confidence 24568899999999999999332211 11 15677889999987654
No 97
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.14 E-value=1e-06 Score=79.36 Aligned_cols=80 Identities=15% Similarity=0.218 Sum_probs=64.9
Q ss_pred ccChHHHHHHHHHHHHHHhhh-----cCCCeEEEEccCCCCC---CCCCcccEEEec-cccCCCC--------hHHHHHH
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQ-----CDPQIITQASSLSQLP---VESFSIDTVLSI-SSSHELP--------GDQLLEE 80 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~-----~~~~v~~~~~d~~~Lp---~~d~sfD~Vls~-~~~~~~~--------~~~~L~e 80 (297)
.++..|+++.|++.|+++... ...++.+..+++..+| +++++||+|++. .+++|++ ...++++
T Consensus 81 ~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~ 160 (293)
T 3thr_A 81 SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKN 160 (293)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHH
T ss_pred eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHH
Confidence 455668889999999876422 1357888999999888 889999999997 7777765 4789999
Q ss_pred HHhcccCCcEEEEEecC
Q 022411 81 ISRVLKPGGTILIYKKL 97 (297)
Q Consensus 81 i~RvLKPGG~l~i~~~~ 97 (297)
++|+|||||+|++..+.
T Consensus 161 ~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 161 IASMVRPGGLLVIDHRN 177 (293)
T ss_dssp HHHTEEEEEEEEEEEEC
T ss_pred HHHHcCCCeEEEEEeCC
Confidence 99999999999988653
No 98
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.14 E-value=7.3e-07 Score=81.38 Aligned_cols=55 Identities=18% Similarity=0.294 Sum_probs=46.9
Q ss_pred CCeEEEEccCCCCC-----CCCCcccEEEeccccCCCC-------hHHHHHHHHhcccCCcEEEEEe
Q 022411 41 PQIITQASSLSQLP-----VESFSIDTVLSISSSHELP-------GDQLLEEISRVLKPGGTILIYK 95 (297)
Q Consensus 41 ~~v~~~~~d~~~Lp-----~~d~sfD~Vls~~~~~~~~-------~~~~L~ei~RvLKPGG~l~i~~ 95 (297)
.++.++.+|+...+ +.+++||+|++..+++|++ ...++++++|+|||||+|++..
T Consensus 154 ~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 154 NNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEP 220 (292)
T ss_dssp TTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 47999999997654 6789999999999887762 4689999999999999999864
No 99
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.12 E-value=2.2e-06 Score=75.19 Aligned_cols=92 Identities=9% Similarity=0.055 Sum_probs=71.6
Q ss_pred ccCceEEEeecCC------------ccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCC-----CcccEEEecc
Q 022411 5 KMQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVES-----FSIDTVLSIS 67 (297)
Q Consensus 5 ~~~~~VLll~~~~------------~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d-----~sfD~Vls~~ 67 (297)
+.+.+||-|.-|+ .++..|+++.|++.++++. ...++.++++|+..+++.. ..||+|++..
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~ 132 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKEN--TAANISYRLLDGLVPEQAAQIHSEIGDANIYMRT 132 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHS--CCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEES
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhC--cccCceEEECcccccccccccccccCccEEEEcc
Confidence 4456777775554 3345577889999998765 2347999999999876543 3499999999
Q ss_pred ccCCCC---hHHHHHHHHhcccCCcEEEEEecCC
Q 022411 68 SSHELP---GDQLLEEISRVLKPGGTILIYKKLT 98 (297)
Q Consensus 68 ~~~~~~---~~~~L~ei~RvLKPGG~l~i~~~~~ 98 (297)
.+|+++ ...++++++|+|||||+|++.++..
T Consensus 133 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 166 (245)
T 3ggd_A 133 GFHHIPVEKRELLGQSLRILLGKQGAMYLIELGT 166 (245)
T ss_dssp SSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECT
T ss_pred hhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 999987 3689999999999999999998764
No 100
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.10 E-value=6.9e-06 Score=68.35 Aligned_cols=92 Identities=15% Similarity=0.148 Sum_probs=69.8
Q ss_pred cCceEEEeecCC------------ccChHHHHHHHHHHHHHHhhhc-CCC--eEEEEccCCCCCCCCCcccEEEeccccC
Q 022411 6 MQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQC-DPQ--IITQASSLSQLPVESFSIDTVLSISSSH 70 (297)
Q Consensus 6 ~~~~VLll~~~~------------~vt~~dlse~m~~~A~~~~~~~-~~~--v~~~~~d~~~Lp~~d~sfD~Vls~~~~~ 70 (297)
.+.+||-+--|+ .++..|+++.|++.++++.... ..+ +.+..+++.. ++++++||+|++...+|
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~v~~~~~~~ 130 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE-NVKDRKYNKIITNPPIR 130 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT-TCTTSCEEEEEECCCST
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhc-ccccCCceEEEECCCcc
Confidence 455677665443 3445577788999988876543 334 9999999877 45578999999988777
Q ss_pred CC-C-hHHHHHHHHhcccCCcEEEEEecCC
Q 022411 71 EL-P-GDQLLEEISRVLKPGGTILIYKKLT 98 (297)
Q Consensus 71 ~~-~-~~~~L~ei~RvLKPGG~l~i~~~~~ 98 (297)
+. . ...+++++.++|+|||++++..+..
T Consensus 131 ~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 131 AGKEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp TCHHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred cchhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 63 3 5789999999999999999988764
No 101
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.09 E-value=2.5e-07 Score=88.25 Aligned_cols=119 Identities=9% Similarity=0.096 Sum_probs=81.7
Q ss_pred cCceEEEeecCCc------------cChHHHHHHHHHHHHHHhhhcC-CCeEEEEccCCCCCCCCCcccEEEeccccCCC
Q 022411 6 MQSAVLALSEDKI------------LPVSAVLNAIRDLGDEAVEQCD-PQIITQASSLSQLPVESFSIDTVLSISSSHEL 72 (297)
Q Consensus 6 ~~~~VLll~~~~~------------vt~~dlse~m~~~A~~~~~~~~-~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~ 72 (297)
.+.+||-+--|+. ++..|+++.|++.|+++ ... ....+..+++..+|+++++||+|++..+++|+
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~a~~~--~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~vl~h~ 184 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKAREK--GIRVRTDFFEKATADDVRRTEGPANVIYAANTLCHI 184 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHHHHTT--TCCEECSCCSHHHHHHHHHHHCCEEEEEEESCGGGC
T ss_pred CCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHHHHHc--CCCcceeeechhhHhhcccCCCCEEEEEECChHHhc
Confidence 4557777755433 33447778888888764 111 11123345666778889999999999999999
Q ss_pred C-hHHHHHHHHhcccCCcEEEEEecCCCC------ccch------HHHHHHHHHHHHHCCcccccch
Q 022411 73 P-GDQLLEEISRVLKPGGTILIYKKLTSD------KGDV------DKAISALEGKLLLAGFLDAQRI 126 (297)
Q Consensus 73 ~-~~~~L~ei~RvLKPGG~l~i~~~~~~~------~g~~------~~~~~~l~~~L~laGFv~v~~~ 126 (297)
+ +..++++++|+|||||+|++..+.... ...+ -...+.+...+..+||..+...
T Consensus 185 ~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~~~ 251 (416)
T 4e2x_A 185 PYVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELVDVQ 251 (416)
T ss_dssp TTHHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEEEE
T ss_pred CCHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEEEE
Confidence 8 889999999999999999998654110 0000 0123478888999999876543
No 102
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.07 E-value=5e-06 Score=77.44 Aligned_cols=103 Identities=16% Similarity=0.221 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCCCCCCCcccEEEeccccCCCC-h--HHHHHHHHhcccCCcEEEEEec
Q 022411 22 SAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSHELP-G--DQLLEEISRVLKPGGTILIYKK 96 (297)
Q Consensus 22 ~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~-~--~~~L~ei~RvLKPGG~l~i~~~ 96 (297)
.|+ +.|++.|+++.... ..++.++.+|+.. +++. .||+|++...+|+++ . ..++++++++|||||+|+|.+.
T Consensus 213 ~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 289 (360)
T 1tw3_A 213 LEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLPR-KADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHER 289 (360)
T ss_dssp EEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSS-CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred ecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCCC-CccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 345 67888888766543 3479999999865 4444 499999999999888 3 4799999999999999999986
Q ss_pred C-CCCcc--chH---------------HHHHHHHHHHHHCCcccccchh
Q 022411 97 L-TSDKG--DVD---------------KAISALEGKLLLAGFLDAQRIQ 127 (297)
Q Consensus 97 ~-~~~~g--~~~---------------~~~~~l~~~L~laGFv~v~~~~ 127 (297)
. ..... .+. ...+++...|..+||..++...
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 338 (360)
T 1tw3_A 290 DDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVEEVRQ 338 (360)
T ss_dssp CBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred eccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEEEEEe
Confidence 5 21111 110 0134677788899998776544
No 103
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.06 E-value=1.8e-06 Score=76.90 Aligned_cols=87 Identities=20% Similarity=0.248 Sum_probs=67.2
Q ss_pred cCceEEEeecCC------------ccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEecccc-CCC
Q 022411 6 MQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSS-HEL 72 (297)
Q Consensus 6 ~~~~VLll~~~~------------~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~-~~~ 72 (297)
.+.+||-|--|+ .++..|+++.|++.++++.. .+ ++.+++..+|+++++||+|++...+ |+.
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~---~~--~~~~d~~~~~~~~~~fD~v~~~~~~~~~~ 128 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAREKGV---KN--VVEAKAEDLPFPSGAFEAVLALGDVLSYV 128 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHHTC---SC--EEECCTTSCCSCTTCEEEEEECSSHHHHC
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHHHHHHHHhhcC---CC--EEECcHHHCCCCCCCEEEEEEcchhhhcc
Confidence 345677664433 34566788899999887643 12 7889999999999999999997654 444
Q ss_pred C-hHHHHHHHHhcccCCcEEEEEecC
Q 022411 73 P-GDQLLEEISRVLKPGGTILIYKKL 97 (297)
Q Consensus 73 ~-~~~~L~ei~RvLKPGG~l~i~~~~ 97 (297)
+ ...+++++.|+|||||+|++..+.
T Consensus 129 ~~~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 129 ENKDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred ccHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 5 789999999999999999998764
No 104
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.06 E-value=9.3e-06 Score=75.73 Aligned_cols=85 Identities=14% Similarity=0.159 Sum_probs=64.0
Q ss_pred CCCeEEEEccCCCCCCCCCcccEEEeccccCCCC-h--HHHHHHHHhcccCCcEEEEEecCCCCc-cc-hH---------
Q 022411 40 DPQIITQASSLSQLPVESFSIDTVLSISSSHELP-G--DQLLEEISRVLKPGGTILIYKKLTSDK-GD-VD--------- 105 (297)
Q Consensus 40 ~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~-~--~~~L~ei~RvLKPGG~l~i~~~~~~~~-g~-~~--------- 105 (297)
..++.++.+|+. .+++ +||+|++...+|+++ . ..+|++++|+|||||+|+|.+...... .. ..
T Consensus 231 ~~~v~~~~~d~~-~~~p--~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~ 307 (348)
T 3lst_A 231 AGRWKVVEGDFL-REVP--HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLA 307 (348)
T ss_dssp TTSEEEEECCTT-TCCC--CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHH
T ss_pred CCCeEEEecCCC-CCCC--CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhh
Confidence 457999999995 3455 899999999999888 4 589999999999999999988642211 11 00
Q ss_pred ------HHHHHHHHHHHHCCcccccchh
Q 022411 106 ------KAISALEGKLLLAGFLDAQRIQ 127 (297)
Q Consensus 106 ------~~~~~l~~~L~laGFv~v~~~~ 127 (297)
.+.+++...|..+||..++...
T Consensus 308 ~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 335 (348)
T 3lst_A 308 ARTGQERTAAELEPLFTAAGLRLDRVVG 335 (348)
T ss_dssp TTSCCCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred cCCCcCCCHHHHHHHHHHCCCceEEEEE
Confidence 1235677888999998876543
No 105
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.05 E-value=2.8e-06 Score=74.80 Aligned_cols=112 Identities=13% Similarity=0.054 Sum_probs=81.2
Q ss_pred ccCceEEEeecCC---------------ccChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCCCCCCCcccEEEecc
Q 022411 5 KMQSAVLALSEDK---------------ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSIS 67 (297)
Q Consensus 5 ~~~~~VLll~~~~---------------~vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~Lp~~d~sfD~Vls~~ 67 (297)
+.|.+||-+--|+ .++..|+++.+++.|+++.+.. ..++.+..+|+..+++++++||+|++..
T Consensus 95 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~~~D~v~~~~ 174 (258)
T 2pwy_A 95 APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEAAYDGVALDL 174 (258)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTTCEEEEEEES
T ss_pred CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCCcCEEEECC
Confidence 4466777775443 2334456788888888776543 4679999999998888889999999842
Q ss_pred ccCCCChHHHHHHHHhcccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCcccccchh
Q 022411 68 SSHELPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQRIQ 127 (297)
Q Consensus 68 ~~~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~~~~ 127 (297)
. .+..++.++.++|||||++++..+.. .....+...+..+||..++...
T Consensus 175 ~----~~~~~l~~~~~~L~~gG~l~~~~~~~-------~~~~~~~~~l~~~gf~~~~~~~ 223 (258)
T 2pwy_A 175 M----EPWKVLEKAALALKPDRFLVAYLPNI-------TQVLELVRAAEAHPFRLERVLE 223 (258)
T ss_dssp S----CGGGGHHHHHHHEEEEEEEEEEESCH-------HHHHHHHHHHTTTTEEEEEEEE
T ss_pred c----CHHHHHHHHHHhCCCCCEEEEEeCCH-------HHHHHHHHHHHHCCCceEEEEE
Confidence 1 24578999999999999999988642 1233555667779998776543
No 106
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.05 E-value=5e-06 Score=74.56 Aligned_cols=113 Identities=17% Similarity=0.061 Sum_probs=81.1
Q ss_pred cCceEEEeecCCc--------------cChHHHHHHHHHHHHHHhhhc-CCCeEEEEccCCCCCCC---CCcccEEEecc
Q 022411 6 MQSAVLALSEDKI--------------LPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVE---SFSIDTVLSIS 67 (297)
Q Consensus 6 ~~~~VLll~~~~~--------------vt~~dlse~m~~~A~~~~~~~-~~~v~~~~~d~~~Lp~~---d~sfD~Vls~~ 67 (297)
.+.+||-|-.|+. |+..|.++.|++.|+++++.. ..++.++.++++.++.. +++||+|++..
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~a 159 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVARA 159 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEES
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEECC
Confidence 4556776655443 345577889999999887654 34699999999988754 47999999975
Q ss_pred ccCCCChHHHHHHHHhcccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCcccccch
Q 022411 68 SSHELPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQRI 126 (297)
Q Consensus 68 ~~~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~~~ 126 (297)
.. +...++.++.++|||||+|++..... .......+...+...||......
T Consensus 160 ~~---~~~~ll~~~~~~LkpgG~l~~~~g~~-----~~~e~~~~~~~l~~~G~~~~~~~ 210 (249)
T 3g89_A 160 VA---PLCVLSELLLPFLEVGGAAVAMKGPR-----VEEELAPLPPALERLGGRLGEVL 210 (249)
T ss_dssp SC---CHHHHHHHHGGGEEEEEEEEEEECSC-----CHHHHTTHHHHHHHHTEEEEEEE
T ss_pred cC---CHHHHHHHHHHHcCCCeEEEEEeCCC-----cHHHHHHHHHHHHHcCCeEEEEE
Confidence 32 24688999999999999999876432 12223356667778899866543
No 107
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.04 E-value=3.3e-06 Score=77.33 Aligned_cols=77 Identities=10% Similarity=0.120 Sum_probs=63.1
Q ss_pred ccChHHHHHHHHHHHHHHhhh-----------------------c---------CCCeEEEEccCCCCCCC-CCcccEEE
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQ-----------------------C---------DPQIITQASSLSQLPVE-SFSIDTVL 64 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~-----------------------~---------~~~v~~~~~d~~~Lp~~-d~sfD~Vl 64 (297)
.++..|+++.|++.|++++-. . ..+|.|.++++...|++ .+.||+|+
T Consensus 139 ~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~ 218 (274)
T 1af7_A 139 KVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGLVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIF 218 (274)
T ss_dssp EEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSEEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEE
T ss_pred EEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCceeechhhcccCeEEecccCCCCCCcCCCeeEEE
Confidence 456778999999999986410 0 03699999999887776 57899999
Q ss_pred eccccCCCC-h--HHHHHHHHhcccCCcEEEEE
Q 022411 65 SISSSHELP-G--DQLLEEISRVLKPGGTILIY 94 (297)
Q Consensus 65 s~~~~~~~~-~--~~~L~ei~RvLKPGG~l~i~ 94 (297)
+.++++|++ . ..++.+++++|+|||.|++-
T Consensus 219 crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 219 CRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp ECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 999999998 3 68999999999999999873
No 108
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.03 E-value=4.3e-06 Score=73.46 Aligned_cols=78 Identities=13% Similarity=0.147 Sum_probs=62.1
Q ss_pred ccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEeccc-cCCCC---hHHHHHHHHhcccCCcEEEE
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISS-SHELP---GDQLLEEISRVLKPGGTILI 93 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~-~~~~~---~~~~L~ei~RvLKPGG~l~i 93 (297)
.++..|+++.|++.|+++......++.++++++..++++ ++||+|++... .++++ ...+++++.++|||||.+++
T Consensus 65 ~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~ 143 (252)
T 1wzn_A 65 EVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFK-NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT 143 (252)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCC-SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred eEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccC-CCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 445668889999999987766556899999999998876 68999998643 44444 46899999999999999987
Q ss_pred Eec
Q 022411 94 YKK 96 (297)
Q Consensus 94 ~~~ 96 (297)
..+
T Consensus 144 ~~~ 146 (252)
T 1wzn_A 144 DFP 146 (252)
T ss_dssp EEE
T ss_pred ecc
Confidence 643
No 109
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.02 E-value=6.1e-06 Score=76.10 Aligned_cols=119 Identities=16% Similarity=0.183 Sum_probs=81.7
Q ss_pred ccCceEEEeecCCc--------------cChHHHHHHHHHHHHHHhhh-----cCCCeEEEEccCCCCCC--CCCcccEE
Q 022411 5 KMQSAVLALSEDKI--------------LPVSAVLNAIRDLGDEAVEQ-----CDPQIITQASSLSQLPV--ESFSIDTV 63 (297)
Q Consensus 5 ~~~~~VLll~~~~~--------------vt~~dlse~m~~~A~~~~~~-----~~~~v~~~~~d~~~Lp~--~d~sfD~V 63 (297)
+++.+||.|--|.. ++..|+.+.|++.|+++... ..+++.++.+|+..++. ++++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 34567887755433 33556778899998876521 25789999999987654 47899999
Q ss_pred EeccccCCCC-----hHHHHHHHHhcccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCcccccch
Q 022411 64 LSISSSHELP-----GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQRI 126 (297)
Q Consensus 64 ls~~~~~~~~-----~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~~~ 126 (297)
++....++.+ ...+++++.|+|||||+|++....... . ......+.+.+..+||..+...
T Consensus 174 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~--~-~~~~~~~~~~l~~~GF~~v~~~ 238 (304)
T 3bwc_A 174 IIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWL--D-LELIEKMSRFIRETGFASVQYA 238 (304)
T ss_dssp EEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTT--C-HHHHHHHHHHHHHHTCSEEEEE
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCccc--c-hHHHHHHHHHHHhCCCCcEEEE
Confidence 9976554433 168899999999999999987543211 1 1234467778889999876544
No 110
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=98.02 E-value=8e-06 Score=72.86 Aligned_cols=102 Identities=11% Similarity=0.066 Sum_probs=73.5
Q ss_pred ccChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCCC--CCCCcccEEEeccccCCC--------------------C
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLP--VESFSIDTVLSISSSHEL--------------------P 73 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~Lp--~~d~sfD~Vls~~~~~~~--------------------~ 73 (297)
.++..|+.+.|++.|++++... ..++.++.+|+..++ +++++||+|+++..++.. .
T Consensus 74 ~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~ 153 (259)
T 3lpm_A 74 KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMC 153 (259)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECCCC-----------------------H
T ss_pred cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccC
Confidence 4556688889999998876543 346999999998875 567899999997554322 0
Q ss_pred -hHHHHHHHHhcccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCcccccchh
Q 022411 74 -GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQRIQ 127 (297)
Q Consensus 74 -~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~~~~ 127 (297)
...++.++.++|||||+|++..... . ..++...+...||.......
T Consensus 154 ~~~~~l~~~~~~LkpgG~l~~~~~~~----~----~~~~~~~l~~~~~~~~~~~~ 200 (259)
T 3lpm_A 154 TLEDTIRVAASLLKQGGKANFVHRPE----R----LLDIIDIMRKYRLEPKRIQF 200 (259)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEECTT----T----HHHHHHHHHHTTEEEEEEEE
T ss_pred CHHHHHHHHHHHccCCcEEEEEEcHH----H----HHHHHHHHHHCCCceEEEEE
Confidence 2568999999999999999865432 1 22566677888997655433
No 111
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.01 E-value=4.1e-06 Score=77.02 Aligned_cols=82 Identities=7% Similarity=0.018 Sum_probs=64.1
Q ss_pred CccChHHHHHHHHHHHHHHhhhc-CCCeEEEEccCCCCC------CCCCccc-----EEEeccccCCCCh----HHHHHH
Q 022411 17 KILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLP------VESFSID-----TVLSISSSHELPG----DQLLEE 80 (297)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~-~~~v~~~~~d~~~Lp------~~d~sfD-----~Vls~~~~~~~~~----~~~L~e 80 (297)
..|+..|.++.|+++|++++... ..++.|+++|+..++ ....+|| .|+++.++||++. ..++++
T Consensus 106 arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~ 185 (277)
T 3giw_A 106 SRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRR 185 (277)
T ss_dssp CEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHH
T ss_pred CEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHH
Confidence 34445688899999999876543 246999999998762 1146677 5888889999983 479999
Q ss_pred HHhcccCCcEEEEEecCC
Q 022411 81 ISRVLKPGGTILIYKKLT 98 (297)
Q Consensus 81 i~RvLKPGG~l~i~~~~~ 98 (297)
+++.|+|||+|++.....
T Consensus 186 l~~~L~PGG~Lvls~~~~ 203 (277)
T 3giw_A 186 LLEPLPSGSYLAMSIGTA 203 (277)
T ss_dssp HHTTSCTTCEEEEEEECC
T ss_pred HHHhCCCCcEEEEEeccC
Confidence 999999999999998764
No 112
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.01 E-value=9.4e-06 Score=67.40 Aligned_cols=110 Identities=15% Similarity=0.114 Sum_probs=78.3
Q ss_pred ccCceEEEeecCCc------------cChHHHHHHHHHHHHHHhhhcC--CCeEEEEccCCCCCCCC-CcccEEEecccc
Q 022411 5 KMQSAVLALSEDKI------------LPVSAVLNAIRDLGDEAVEQCD--PQIITQASSLSQLPVES-FSIDTVLSISSS 69 (297)
Q Consensus 5 ~~~~~VLll~~~~~------------vt~~dlse~m~~~A~~~~~~~~--~~v~~~~~d~~~Lp~~d-~sfD~Vls~~~~ 69 (297)
+.+.+||-+-.|+. ++..|+++.+++.++++..... .++.+..+++.. ++++ .+||+|++...+
T Consensus 32 ~~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~~~ 110 (192)
T 1l3i_A 32 GKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE-ALCKIPDIDIAVVGGSG 110 (192)
T ss_dssp CTTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-HHTTSCCEEEEEESCCT
T ss_pred CCCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-hcccCCCCCEEEECCch
Confidence 34567777755542 3345667888998887765432 579999998876 3344 589999988765
Q ss_pred CCCChHHHHHHHHhcccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCcccccc
Q 022411 70 HELPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQR 125 (297)
Q Consensus 70 ~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~~ 125 (297)
++ ...++.++.++|+|||++++..... .....+...+...|| +++.
T Consensus 111 ~~--~~~~l~~~~~~l~~gG~l~~~~~~~-------~~~~~~~~~l~~~g~-~~~~ 156 (192)
T 1l3i_A 111 GE--LQEILRIIKDKLKPGGRIIVTAILL-------ETKFEAMECLRDLGF-DVNI 156 (192)
T ss_dssp TC--HHHHHHHHHHTEEEEEEEEEEECBH-------HHHHHHHHHHHHTTC-CCEE
T ss_pred HH--HHHHHHHHHHhcCCCcEEEEEecCc-------chHHHHHHHHHHCCC-ceEE
Confidence 43 4688999999999999999887542 223466677888999 5443
No 113
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.00 E-value=5e-06 Score=79.42 Aligned_cols=93 Identities=15% Similarity=0.099 Sum_probs=73.4
Q ss_pred cCceEEEeecCC------------ccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEeccccCC--
Q 022411 6 MQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHE-- 71 (297)
Q Consensus 6 ~~~~VLll~~~~------------~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~-- 71 (297)
.+.+||-+--|+ .++..|+++.|++.|++++......+.++.+|+..++.++++||+|+++..+|+
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~~~ 312 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHVGG 312 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCCTTC
T ss_pred CCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchhhcc
Confidence 345677664443 344557788999999988766555699999999998877789999999988887
Q ss_pred ---CC-hHHHHHHHHhcccCCcEEEEEecCC
Q 022411 72 ---LP-GDQLLEEISRVLKPGGTILIYKKLT 98 (297)
Q Consensus 72 ---~~-~~~~L~ei~RvLKPGG~l~i~~~~~ 98 (297)
.. ...++.++.++|||||++++.....
T Consensus 313 ~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~ 343 (381)
T 3dmg_A 313 AVILDVAQAFVNVAAARLRPGGVFFLVSNPF 343 (381)
T ss_dssp SSCCHHHHHHHHHHHHHEEEEEEEEEEECTT
T ss_pred cccHHHHHHHHHHHHHhcCcCcEEEEEEcCC
Confidence 22 4689999999999999999986543
No 114
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=97.99 E-value=2.3e-06 Score=75.21 Aligned_cols=78 Identities=9% Similarity=-0.026 Sum_probs=61.9
Q ss_pred cChHHHHHHHHHHHHHHhhhc-CCCeEEEEccCCCC-C--CCCCcccEEEeccccCCCCh---------HHHHHHHHhcc
Q 022411 19 LPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQL-P--VESFSIDTVLSISSSHELPG---------DQLLEEISRVL 85 (297)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~-~~~v~~~~~d~~~L-p--~~d~sfD~Vls~~~~~~~~~---------~~~L~ei~RvL 85 (297)
+...|+++.|++.|++++... ..++.++.+|+..+ + +++++||.|++++...|... ..++.+++|+|
T Consensus 61 v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~L 140 (218)
T 3dxy_A 61 FLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKL 140 (218)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHE
T ss_pred EEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHc
Confidence 445588889999998876554 46799999998874 4 78999999999876555431 25999999999
Q ss_pred cCCcEEEEEec
Q 022411 86 KPGGTILIYKK 96 (297)
Q Consensus 86 KPGG~l~i~~~ 96 (297)
||||+|++...
T Consensus 141 kpGG~l~i~td 151 (218)
T 3dxy_A 141 QLGGVFHMATD 151 (218)
T ss_dssp EEEEEEEEEES
T ss_pred CCCcEEEEEeC
Confidence 99999998764
No 115
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=97.97 E-value=4.1e-06 Score=70.86 Aligned_cols=80 Identities=10% Similarity=0.052 Sum_probs=64.9
Q ss_pred cChHHHHHHHHHHHHHHhhhc-CCCeEEEEccCCCCC--CCCCcccEEEeccccCCC-C-hHHHHHHHHh--cccCCcEE
Q 022411 19 LPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLP--VESFSIDTVLSISSSHEL-P-GDQLLEEISR--VLKPGGTI 91 (297)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~-~~~v~~~~~d~~~Lp--~~d~sfD~Vls~~~~~~~-~-~~~~L~ei~R--vLKPGG~l 91 (297)
++..|+++.|++.|+++++.. ..++.++++|+..++ +++++||+|++...+++. . ...++.++.+ +|||||+|
T Consensus 70 v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l 149 (189)
T 3p9n_A 70 VLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVA 149 (189)
T ss_dssp EEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEE
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEE
Confidence 456678889999999877554 358999999998764 457899999999887775 3 5789999999 99999999
Q ss_pred EEEecCC
Q 022411 92 LIYKKLT 98 (297)
Q Consensus 92 ~i~~~~~ 98 (297)
++.....
T Consensus 150 ~~~~~~~ 156 (189)
T 3p9n_A 150 VVERATT 156 (189)
T ss_dssp EEEEETT
T ss_pred EEEecCC
Confidence 9987653
No 116
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=97.97 E-value=5.2e-06 Score=74.85 Aligned_cols=109 Identities=14% Similarity=0.147 Sum_probs=79.0
Q ss_pred ccCceEEEeecCC---------------ccChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCCCCCCCcccEEEecc
Q 022411 5 KMQSAVLALSEDK---------------ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSIS 67 (297)
Q Consensus 5 ~~~~~VLll~~~~---------------~vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~Lp~~d~sfD~Vls~~ 67 (297)
+.+.+||-+--|+ .++..|+++.+++.|+++.... ..++.+..+|+.. ++++++||+|++.
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~~~~~fD~Vi~~- 186 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-FISDQMYDAVIAD- 186 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-CCCSCCEEEEEEC-
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-cCcCCCccEEEEc-
Confidence 3456777764433 3344566788899988876543 3579999999987 6778899999983
Q ss_pred ccCCCC-hHHHHHHHHhcccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCcccccch
Q 022411 68 SSHELP-GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQRI 126 (297)
Q Consensus 68 ~~~~~~-~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~~~ 126 (297)
.+ +..++.++.++|||||++++..+.. .....+...+..+||..++..
T Consensus 187 ----~~~~~~~l~~~~~~LkpgG~l~i~~~~~-------~~~~~~~~~l~~~Gf~~~~~~ 235 (275)
T 1yb2_A 187 ----IPDPWNHVQKIASMMKPGSVATFYLPNF-------DQSEKTVLSLSASGMHHLETV 235 (275)
T ss_dssp ----CSCGGGSHHHHHHTEEEEEEEEEEESSH-------HHHHHHHHHSGGGTEEEEEEE
T ss_pred ----CcCHHHHHHHHHHHcCCCCEEEEEeCCH-------HHHHHHHHHHHHCCCeEEEEE
Confidence 33 5688999999999999999987642 123355566777899876554
No 117
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=97.97 E-value=1e-05 Score=66.90 Aligned_cols=93 Identities=9% Similarity=-0.074 Sum_probs=65.8
Q ss_pred cChHHHHHHHHHHHHHHhhhc-CC-CeEEEEccCC-CCCCCCCcccEEEeccccCCCChHHHHHHHHhcccCCcEEEEEe
Q 022411 19 LPVSAVLNAIRDLGDEAVEQC-DP-QIITQASSLS-QLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYK 95 (297)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~-~~-~v~~~~~d~~-~Lp~~d~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i~~ 95 (297)
++..|+++.|++.|++++... .. ++ ++.+++. .++..+++||+|++...+++ ..++++++++|||||++++..
T Consensus 52 v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~D~i~~~~~~~~---~~~l~~~~~~L~~gG~l~~~~ 127 (178)
T 3hm2_A 52 AVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVPDNPDVIFIGGGLTA---PGVFAAAWKRLPVGGRLVANA 127 (178)
T ss_dssp EEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCCSCCSEEEECC-TTC---TTHHHHHHHTCCTTCEEEEEE
T ss_pred EEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccCCCCCEEEECCcccH---HHHHHHHHHhcCCCCEEEEEe
Confidence 445678889999998876554 23 67 7778774 44433389999999888776 568999999999999999887
Q ss_pred cCCCCccchHHHHHHHHHHHHHCCccc
Q 022411 96 KLTSDKGDVDKAISALEGKLLLAGFLD 122 (297)
Q Consensus 96 ~~~~~~g~~~~~~~~l~~~L~laGFv~ 122 (297)
... .....+...+...|+.-
T Consensus 128 ~~~-------~~~~~~~~~~~~~~~~~ 147 (178)
T 3hm2_A 128 VTV-------ESEQMLWALRKQFGGTI 147 (178)
T ss_dssp CSH-------HHHHHHHHHHHHHCCEE
T ss_pred ecc-------ccHHHHHHHHHHcCCee
Confidence 542 12224555666667543
No 118
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=97.96 E-value=2e-05 Score=68.17 Aligned_cols=107 Identities=7% Similarity=-0.051 Sum_probs=75.9
Q ss_pred cCceEEEeecCC------------ccChHHHHHHHHHHHHHHhhhc-CC-CeEEEEccCCCCCCCCCcccEEEeccccCC
Q 022411 6 MQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQC-DP-QIITQASSLSQLPVESFSIDTVLSISSSHE 71 (297)
Q Consensus 6 ~~~~VLll~~~~------------~vt~~dlse~m~~~A~~~~~~~-~~-~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~ 71 (297)
.+.+||-|--|+ .|+..|+++.|++.|+++++.. .. ++.++.+++.........||+|++....
T Consensus 55 ~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~~-- 132 (204)
T 3njr_A 55 RGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGGGG-- 132 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECSCC--
T ss_pred CCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECCcc--
Confidence 455666664443 3445678889999999876554 34 7999999998743344689999987633
Q ss_pred CChHHHHHHHHhcccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCcccc
Q 022411 72 LPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDA 123 (297)
Q Consensus 72 ~~~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v 123 (297)
... ++.+++++|||||+|++..... .....+...+...||...
T Consensus 133 -~~~-~l~~~~~~LkpgG~lv~~~~~~-------~~~~~~~~~l~~~g~~i~ 175 (204)
T 3njr_A 133 -SQA-LYDRLWEWLAPGTRIVANAVTL-------ESETLLTQLHARHGGQLL 175 (204)
T ss_dssp -CHH-HHHHHHHHSCTTCEEEEEECSH-------HHHHHHHHHHHHHCSEEE
T ss_pred -cHH-HHHHHHHhcCCCcEEEEEecCc-------ccHHHHHHHHHhCCCcEE
Confidence 445 9999999999999999887542 223356667777786543
No 119
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=97.94 E-value=5.3e-06 Score=73.74 Aligned_cols=99 Identities=13% Similarity=0.129 Sum_probs=68.7
Q ss_pred ccChHHHHHHHHHHHHHHhhh-------cCCCeEEEEccCCC-CC--CCCCcccEEEeccccCCCC---------hHHHH
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQ-------CDPQIITQASSLSQ-LP--VESFSIDTVLSISSSHELP---------GDQLL 78 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~-------~~~~v~~~~~d~~~-Lp--~~d~sfD~Vls~~~~~~~~---------~~~~L 78 (297)
.+...|+++.|++.|++++.. ...++.++.+|+.. +| +++++||.|++.+...|.. ...++
T Consensus 72 ~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l 151 (235)
T 3ckk_A 72 LILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLTKMFFLFPDPHFKRTKHKWRIISPTLL 151 (235)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEEEEEEESCC-----------CCCHHHH
T ss_pred eEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCeeEEEEeCCCchhhhhhhhhhhhhHHHH
Confidence 344568888999998876532 24689999999986 77 8899999999877544432 14799
Q ss_pred HHHHhcccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCC-cccc
Q 022411 79 EEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAG-FLDA 123 (297)
Q Consensus 79 ~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laG-Fv~v 123 (297)
++++|+|||||.|++..... .....+...+...| |..+
T Consensus 152 ~~~~~~LkpGG~l~~~td~~-------~~~~~~~~~l~~~~~f~~~ 190 (235)
T 3ckk_A 152 AEYAYVLRVGGLVYTITDVL-------ELHDWMCTHFEEHPLFERV 190 (235)
T ss_dssp HHHHHHEEEEEEEEEEESCH-------HHHHHHHHHHHTSTTEEEE
T ss_pred HHHHHHCCCCCEEEEEeCCH-------HHHHHHHHHHHHCCCcccc
Confidence 99999999999999875421 11123444555555 6654
No 120
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=97.94 E-value=1.1e-05 Score=70.59 Aligned_cols=122 Identities=11% Similarity=0.076 Sum_probs=74.5
Q ss_pred ccCceEEEeecCCcc---------------ChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCC---CCCCCCcccEEEec
Q 022411 5 KMQSAVLALSEDKIL---------------PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQ---LPVESFSIDTVLSI 66 (297)
Q Consensus 5 ~~~~~VLll~~~~~v---------------t~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~---Lp~~d~sfD~Vls~ 66 (297)
+.|.+||-|--|+.. +..|+++.|++.+.+++.. ..++.++.+++.. +|+.+++||+|++.
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~-~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~ 154 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKK-RTNIIPVIEDARHPHKYRMLIAMVDVIFAD 154 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHH-CTTEEEECSCTTCGGGGGGGCCCEEEEEEC
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhc-cCCeEEEEcccCChhhhcccCCcEEEEEEc
Confidence 346677777555432 2334555554544443332 3689999999987 56677899999996
Q ss_pred cccCCCC-hHHHHHHHHhcccCCcEEEEEecCCC--CccchHHHHHHHHHHHHHCCcccccchhcc
Q 022411 67 SSSHELP-GDQLLEEISRVLKPGGTILIYKKLTS--DKGDVDKAISALEGKLLLAGFLDAQRIQLK 129 (297)
Q Consensus 67 ~~~~~~~-~~~~L~ei~RvLKPGG~l~i~~~~~~--~~g~~~~~~~~l~~~L~laGFv~v~~~~~k 129 (297)
.. ... ...++.++.++|||||++++...... ...............|..+||..++.....
T Consensus 155 ~~--~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 218 (233)
T 2ipx_A 155 VA--QPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQLTLE 218 (233)
T ss_dssp CC--CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEEEEEEEECT
T ss_pred CC--CccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCceEEEEecC
Confidence 54 222 34568899999999999998643210 001112212222456778899877644433
No 121
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=97.93 E-value=5.7e-06 Score=78.09 Aligned_cols=85 Identities=12% Similarity=0.160 Sum_probs=63.6
Q ss_pred CCCeEEEEccCCCCCCCCCcccEEEeccccCCCCh---HHHHHHHHhcccCCcEEEEEecCCCCc--cch--------H-
Q 022411 40 DPQIITQASSLSQLPVESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIYKKLTSDK--GDV--------D- 105 (297)
Q Consensus 40 ~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~~---~~~L~ei~RvLKPGG~l~i~~~~~~~~--g~~--------~- 105 (297)
..++.++.+|+.. |++.. |+|++...+|+++. ..+|++++|+|||||+|+|.+...... ... +
T Consensus 245 ~~~v~~~~~d~~~-~~p~~--D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~ 321 (368)
T 3reo_A 245 FSGVEHLGGDMFD-GVPKG--DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDA 321 (368)
T ss_dssp CTTEEEEECCTTT-CCCCC--SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHH
T ss_pred cCCCEEEecCCCC-CCCCC--CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhH
Confidence 4689999999986 77754 99999999998873 478999999999999999998652211 100 0
Q ss_pred -----------HHHHHHHHHHHHCCcccccchh
Q 022411 106 -----------KAISALEGKLLLAGFLDAQRIQ 127 (297)
Q Consensus 106 -----------~~~~~l~~~L~laGFv~v~~~~ 127 (297)
.+.+++...|..+||..++...
T Consensus 322 ~~~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~~ 354 (368)
T 3reo_A 322 LMLAYNPGGKERTEKEFQALAMASGFRGFKVAS 354 (368)
T ss_dssp HHHHHSSBCCCCCHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHhhcCCCccCCHHHHHHHHHHCCCeeeEEEE
Confidence 0134677888999999876543
No 122
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=97.93 E-value=9.5e-06 Score=72.60 Aligned_cols=111 Identities=15% Similarity=0.157 Sum_probs=78.6
Q ss_pred ccCceEEEeecCC---------------ccChHHHHHHHHHHHHHHhhhc----CCCeEEEEccCCCCCCCCCcccEEEe
Q 022411 5 KMQSAVLALSEDK---------------ILPVSAVLNAIRDLGDEAVEQC----DPQIITQASSLSQLPVESFSIDTVLS 65 (297)
Q Consensus 5 ~~~~~VLll~~~~---------------~vt~~dlse~m~~~A~~~~~~~----~~~v~~~~~d~~~Lp~~d~sfD~Vls 65 (297)
+.|.+||-+-.|+ .++..|+++.+++.|+++.+.. ..++.+..+|+..+++++++||+|++
T Consensus 98 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~v~~ 177 (280)
T 1i9g_A 98 FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRAVL 177 (280)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEEEE
T ss_pred CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeEEEE
Confidence 4466777775443 2334456688888888876543 46899999999988888899999998
Q ss_pred ccccCCCChHHHHHHHHhcccCCcEEEEEecCCCCccchHHHHHHHHHHHHH-CCcccccch
Q 022411 66 ISSSHELPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLL-AGFLDAQRI 126 (297)
Q Consensus 66 ~~~~~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~l-aGFv~v~~~ 126 (297)
... .+..++.++.++|+|||++++..+.. .....+...+.. .||..++..
T Consensus 178 ~~~----~~~~~l~~~~~~L~pgG~l~~~~~~~-------~~~~~~~~~l~~~~~f~~~~~~ 228 (280)
T 1i9g_A 178 DML----APWEVLDAVSRLLVAGGVLMVYVATV-------TQLSRIVEALRAKQCWTEPRAW 228 (280)
T ss_dssp ESS----CGGGGHHHHHHHEEEEEEEEEEESSH-------HHHHHHHHHHHHHSSBCCCEEE
T ss_pred CCc----CHHHHHHHHHHhCCCCCEEEEEeCCH-------HHHHHHHHHHHhcCCcCCcEEE
Confidence 432 24578999999999999999987642 112234444544 789876554
No 123
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=97.90 E-value=1.2e-05 Score=72.32 Aligned_cols=99 Identities=14% Similarity=0.154 Sum_probs=71.4
Q ss_pred ccChHHHHHHHHHHHHHHhhhc-CCCeEEEEccCCCCCCCCCcccEEEeccccCCC------------------------
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVESFSIDTVLSISSSHEL------------------------ 72 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~-~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~------------------------ 72 (297)
.++..|+++.|++.|++++... ..++.++.+|+... +++++||+|+++..++..
T Consensus 135 ~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~-~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g 213 (276)
T 2b3t_A 135 EIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSA-LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSG 213 (276)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGG-GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhh-cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcH
Confidence 3445577889999999877554 34799999998763 456799999998543322
Q ss_pred -C-hHHHHHHHHhcccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCcccccc
Q 022411 73 -P-GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQR 125 (297)
Q Consensus 73 -~-~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~~ 125 (297)
. ...++.++.++|||||++++..... . .+.+...+..+||..+..
T Consensus 214 ~~~~~~~l~~~~~~LkpgG~l~~~~~~~----~----~~~~~~~l~~~Gf~~v~~ 260 (276)
T 2b3t_A 214 MADIVHIIEQSRNALVSGGFLLLEHGWQ----Q----GEAVRQAFILAGYHDVET 260 (276)
T ss_dssp THHHHHHHHHHGGGEEEEEEEEEECCSS----C----HHHHHHHHHHTTCTTCCE
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEECch----H----HHHHHHHHHHCCCcEEEE
Confidence 1 2578899999999999999865332 1 125666788899987653
No 124
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=97.90 E-value=1.5e-05 Score=70.37 Aligned_cols=111 Identities=16% Similarity=0.249 Sum_probs=79.6
Q ss_pred ccCceEEEeecCCc---------------cChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCCCCCCCcccEEEecc
Q 022411 5 KMQSAVLALSEDKI---------------LPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSIS 67 (297)
Q Consensus 5 ~~~~~VLll~~~~~---------------vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~Lp~~d~sfD~Vls~~ 67 (297)
+.|.+||-+--|+. ++..|+++.+++.|+++.+.. ..++.+..+|+... +++.+||+|++..
T Consensus 92 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~v~~~~ 170 (255)
T 3mb5_A 92 SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG-IEEENVDHVILDL 170 (255)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-CCCCSEEEEEECS
T ss_pred CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-cCCCCcCEEEECC
Confidence 34667777755432 334466688899988876543 23499999999854 7788999999843
Q ss_pred ccCCCChHHHHHHHHhcccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCC--cccccchh
Q 022411 68 SSHELPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAG--FLDAQRIQ 127 (297)
Q Consensus 68 ~~~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laG--Fv~v~~~~ 127 (297)
. .+..++.++.++|||||++++..+.. ...+.+...+..+| |.+++...
T Consensus 171 ~----~~~~~l~~~~~~L~~gG~l~~~~~~~-------~~~~~~~~~l~~~g~~f~~~~~~e 221 (255)
T 3mb5_A 171 P----QPERVVEHAAKALKPGGFFVAYTPCS-------NQVMRLHEKLREFKDYFMKPRTIN 221 (255)
T ss_dssp S----CGGGGHHHHHHHEEEEEEEEEEESSH-------HHHHHHHHHHHHTGGGBSCCEEEC
T ss_pred C----CHHHHHHHHHHHcCCCCEEEEEECCH-------HHHHHHHHHHHHcCCCccccEEEE
Confidence 2 24578999999999999999887542 22346667888999 98876544
No 125
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=97.87 E-value=1e-05 Score=72.02 Aligned_cols=83 Identities=24% Similarity=0.290 Sum_probs=64.6
Q ss_pred cCceEEEeecCC--------------ccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEeccccCC
Q 022411 6 MQSAVLALSEDK--------------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHE 71 (297)
Q Consensus 6 ~~~~VLll~~~~--------------~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~ 71 (297)
.+.+||-+.-|+ .++..|+++.|++.|+++. .++.+..+++..+|+++++||+|++....
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~d~~~~~~~~~~fD~v~~~~~~-- 158 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY----PQVTFCVASSHRLPFSDTSMDAIIRIYAP-- 158 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC----TTSEEEECCTTSCSBCTTCEEEEEEESCC--
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC----CCcEEEEcchhhCCCCCCceeEEEEeCCh--
Confidence 456777775443 3445567788888886643 56889999999999999999999987642
Q ss_pred CChHHHHHHHHhcccCCcEEEEEecCC
Q 022411 72 LPGDQLLEEISRVLKPGGTILIYKKLT 98 (297)
Q Consensus 72 ~~~~~~L~ei~RvLKPGG~l~i~~~~~ 98 (297)
..+.++.|+|||||+|++..+..
T Consensus 159 ----~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 159 ----CKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp ----CCHHHHHHHEEEEEEEEEEEECT
T ss_pred ----hhHHHHHHhcCCCcEEEEEEcCH
Confidence 24899999999999999998765
No 126
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=97.87 E-value=1.2e-05 Score=68.82 Aligned_cols=88 Identities=14% Similarity=0.123 Sum_probs=69.2
Q ss_pred ccCceEEEeecCC------------ccChHHHHHHHHHHHHHHhhhc-CCCeEEEEccCCCCCCCCCcccEEEeccccCC
Q 022411 5 KMQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVESFSIDTVLSISSSHE 71 (297)
Q Consensus 5 ~~~~~VLll~~~~------------~vt~~dlse~m~~~A~~~~~~~-~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~ 71 (297)
+.+.+||-+-.|+ .++..|+++.|++.|+++.... ..++.++.+|+...+.++++||+|++...+++
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~~ 155 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPE 155 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEESSBCSS
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCccEEEEccchhh
Confidence 3466777775554 3445577889999998876553 45799999999887777889999999988888
Q ss_pred CChHHHHHHHHhcccCCcEEEEEecC
Q 022411 72 LPGDQLLEEISRVLKPGGTILIYKKL 97 (297)
Q Consensus 72 ~~~~~~L~ei~RvLKPGG~l~i~~~~ 97 (297)
++. ++.++|||||+|++....
T Consensus 156 ~~~-----~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 156 IPT-----ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CCT-----HHHHTEEEEEEEEEEECS
T ss_pred hhH-----HHHHhcccCcEEEEEEcC
Confidence 773 689999999999988764
No 127
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=97.85 E-value=6.6e-05 Score=64.51 Aligned_cols=105 Identities=16% Similarity=0.116 Sum_probs=68.1
Q ss_pred cChHHHHHHHHHHHHH----Hhhh-cCCCeEEEEccCCCCCCCCCcccEEEeccc---c--CCCC-hHHHHHHHHhcccC
Q 022411 19 LPVSAVLNAIRDLGDE----AVEQ-CDPQIITQASSLSQLPVESFSIDTVLSISS---S--HELP-GDQLLEEISRVLKP 87 (297)
Q Consensus 19 vt~~dlse~m~~~A~~----~~~~-~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~---~--~~~~-~~~~L~ei~RvLKP 87 (297)
++..|+++.|++.+.+ +... ...++.++++|+.++|+++++ |.|+..+. . |+++ +..++++++|+|||
T Consensus 54 v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp 132 (218)
T 3mq2_A 54 VVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRP 132 (218)
T ss_dssp EEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEE
T ss_pred EEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCC
Confidence 3444666776665322 2212 245899999999999998887 88775442 2 2444 57899999999999
Q ss_pred CcEEEEEecCCCC---------c--cchHHHHHHHHHHHHHCCccccc
Q 022411 88 GGTILIYKKLTSD---------K--GDVDKAISALEGKLLLAGFLDAQ 124 (297)
Q Consensus 88 GG~l~i~~~~~~~---------~--g~~~~~~~~l~~~L~laGFv~v~ 124 (297)
||+|++....... . .......+.+...+..+||....
T Consensus 133 gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~ 180 (218)
T 3mq2_A 133 GASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLAD 180 (218)
T ss_dssp EEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEE
T ss_pred CcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCcee
Confidence 9999986432110 0 01111223477788999998654
No 128
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=97.85 E-value=6.4e-06 Score=76.89 Aligned_cols=83 Identities=16% Similarity=0.217 Sum_probs=61.4
Q ss_pred CCeEEEEccCCCCCCCCCcccEEEeccccCCCC-hH--HHHHHHHhcccC---CcEEEEEecCCCCccch------H---
Q 022411 41 PQIITQASSLSQLPVESFSIDTVLSISSSHELP-GD--QLLEEISRVLKP---GGTILIYKKLTSDKGDV------D--- 105 (297)
Q Consensus 41 ~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~-~~--~~L~ei~RvLKP---GG~l~i~~~~~~~~g~~------~--- 105 (297)
.++.++.+|+.. +++. ||+|++...+|+++ .. .+|++++|+||| ||+|+|.+......... .
T Consensus 231 ~~v~~~~~d~~~-~~p~--~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~ 307 (352)
T 1fp2_A 231 NNLTYVGGDMFT-SIPN--ADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLM 307 (352)
T ss_dssp TTEEEEECCTTT-CCCC--CSEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHH
T ss_pred CCcEEEeccccC-CCCC--ccEEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhc
Confidence 469999999965 6653 99999999999888 44 899999999999 99999998642211110 0
Q ss_pred -----------HHHHHHHHHHHHCCcccccch
Q 022411 106 -----------KAISALEGKLLLAGFLDAQRI 126 (297)
Q Consensus 106 -----------~~~~~l~~~L~laGFv~v~~~ 126 (297)
.+.+++...+..+||..++..
T Consensus 308 d~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~ 339 (352)
T 1fp2_A 308 DVNMACLNGKERNEEEWKKLFIEAGFQHYKIS 339 (352)
T ss_dssp HHHGGGGTCCCEEHHHHHHHHHHTTCCEEEEE
T ss_pred cHHHHhccCCCCCHHHHHHHHHHCCCCeeEEE
Confidence 012467777888999876644
No 129
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=97.84 E-value=1.7e-05 Score=74.36 Aligned_cols=87 Identities=15% Similarity=0.142 Sum_probs=64.9
Q ss_pred cCceEEEeecCC-------------ccChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCCCCCCCcccEEEeccccC
Q 022411 6 MQSAVLALSEDK-------------ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSH 70 (297)
Q Consensus 6 ~~~~VLll~~~~-------------~vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~ 70 (297)
.+.+||-|--|+ .|+..|++ +|++.|++++... ..++.++.++++.+++++++||+|++....+
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~~ 144 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKAGARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGY 144 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHTTCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCBB
T ss_pred CCCEEEEEeccchHHHHHHHHCCCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEccccc
Confidence 345666665544 34445666 4888888876543 3459999999999999999999999976433
Q ss_pred ---CCC-hHHHHHHHHhcccCCcEEEE
Q 022411 71 ---ELP-GDQLLEEISRVLKPGGTILI 93 (297)
Q Consensus 71 ---~~~-~~~~L~ei~RvLKPGG~l~i 93 (297)
+.. ...++.++.|+|||||+++.
T Consensus 145 ~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 145 CLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp TBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred cccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 333 67899999999999999873
No 130
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=97.82 E-value=4e-06 Score=81.30 Aligned_cols=79 Identities=10% Similarity=0.002 Sum_probs=59.6
Q ss_pred cChHHHHHHHHHHHHHHhh-------h--c-CCCeEEEEccCCCCCCCC--CcccEEEeccccCCCChHHHHHHHHhccc
Q 022411 19 LPVSAVLNAIRDLGDEAVE-------Q--C-DPQIITQASSLSQLPVES--FSIDTVLSISSSHELPGDQLLEEISRVLK 86 (297)
Q Consensus 19 vt~~dlse~m~~~A~~~~~-------~--~-~~~v~~~~~d~~~Lp~~d--~sfD~Vls~~~~~~~~~~~~L~ei~RvLK 86 (297)
+...|+++.|+++|+++++ . . ..+|.++++|+.++|+.+ ..||+|+++..+++-.....|.+++|+||
T Consensus 200 VvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~~~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLK 279 (438)
T 3uwp_A 200 HYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRERIANTSVIFVNNFAFGPEVDHQLKERFANMK 279 (438)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHHHHTCSEEEECCTTCCHHHHHHHHHHHTTSC
T ss_pred EEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCccccccCCccEEEEcccccCchHHHHHHHHHHcCC
Confidence 3344567778888776432 1 1 257999999999999865 57999999876543236788999999999
Q ss_pred CCcEEEEEecC
Q 022411 87 PGGTILIYKKL 97 (297)
Q Consensus 87 PGG~l~i~~~~ 97 (297)
|||+|++.+..
T Consensus 280 PGGrIVssE~f 290 (438)
T 3uwp_A 280 EGGRIVSSKPF 290 (438)
T ss_dssp TTCEEEESSCS
T ss_pred CCcEEEEeecc
Confidence 99999988754
No 131
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=97.82 E-value=9.4e-06 Score=68.69 Aligned_cols=93 Identities=10% Similarity=0.021 Sum_probs=68.1
Q ss_pred ccCceEEEeecCC---------------ccChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCCC-CCCCcccEEEec
Q 022411 5 KMQSAVLALSEDK---------------ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLP-VESFSIDTVLSI 66 (297)
Q Consensus 5 ~~~~~VLll~~~~---------------~vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~Lp-~~d~sfD~Vls~ 66 (297)
+.|.+||-+--|+ .++..|+++.|++.|+++.... ..++.++.+|+..++ +.+++||+|++.
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~ 100 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFN 100 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEc
Confidence 4456677664443 3345566788999998876554 357999999998876 667899999987
Q ss_pred cccC-----CC-C----hHHHHHHHHhcccCCcEEEEEecC
Q 022411 67 SSSH-----EL-P----GDQLLEEISRVLKPGGTILIYKKL 97 (297)
Q Consensus 67 ~~~~-----~~-~----~~~~L~ei~RvLKPGG~l~i~~~~ 97 (297)
..+. ++ . ...+++++.++|||||++++..+.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 101 LGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp ESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 6441 11 1 247999999999999999988754
No 132
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=97.81 E-value=2.3e-05 Score=74.10 Aligned_cols=102 Identities=12% Similarity=0.061 Sum_probs=68.4
Q ss_pred cChHHHHHHHHHHHHHHhhhcC-CCeEEEEccCCC-CCC-CCCcccEEEeccccCCCChHHHHHHHHhcccCCcEEEEEe
Q 022411 19 LPVSAVLNAIRDLGDEAVEQCD-PQIITQASSLSQ-LPV-ESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYK 95 (297)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~~-~~v~~~~~d~~~-Lp~-~d~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i~~ 95 (297)
++..|+++.|++.|+++++... .++.++.+|+.. +|. .+++||+|+++..++......++.+++++|||||++++..
T Consensus 198 v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p~~~~~~~~~l~~~~~~LkpgG~~~~~~ 277 (373)
T 2qm3_A 198 IAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPPETLEAIRAFVGRGIATLKGPRCAGYFG 277 (373)
T ss_dssp EEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCCSSHHHHHHHHHHHHHTBCSTTCEEEEE
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCCCchHHHHHHHHHHHHHcccCCeEEEEE
Confidence 3345778899999998876542 389999999988 774 4578999999876543335788999999999999653333
Q ss_pred cCCCCccchHHHHHHHHHHHH-HCCccc
Q 022411 96 KLTSDKGDVDKAISALEGKLL-LAGFLD 122 (297)
Q Consensus 96 ~~~~~~g~~~~~~~~l~~~L~-laGFv~ 122 (297)
.... .+.. ..+..+...+. ..||..
T Consensus 278 ~~~~-~~~~-~~~~~~~~~l~~~~g~~~ 303 (373)
T 2qm3_A 278 ITRR-ESSL-DKWREIQKLLLNEFNVVI 303 (373)
T ss_dssp ECTT-TCCH-HHHHHHHHHHHHTSCCEE
T ss_pred EecC-cCCH-HHHHHHHHHHHHhcCcch
Confidence 3220 0111 11224555555 678754
No 133
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=97.80 E-value=3.7e-05 Score=66.92 Aligned_cols=122 Identities=15% Similarity=0.057 Sum_probs=71.6
Q ss_pred ccCceEEEeecCCc--------------cChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCC----CCCCCcccEEEec
Q 022411 5 KMQSAVLALSEDKI--------------LPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQL----PVESFSIDTVLSI 66 (297)
Q Consensus 5 ~~~~~VLll~~~~~--------------vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~L----p~~d~sfD~Vls~ 66 (297)
+.|.+||-|--|+. |+..|+++.|++...+.+.. ..++.++.+|+... ++. ++||+|++.
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~-~~~v~~~~~d~~~~~~~~~~~-~~fD~V~~~ 133 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRE-RNNIIPLLFDASKPWKYSGIV-EKVDLIYQD 133 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHH-CSSEEEECSCTTCGGGTTTTC-CCEEEEEEC
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhc-CCCeEEEEcCCCCchhhcccc-cceeEEEEe
Confidence 45677887755443 33445566665544433322 34788888888763 555 789999997
Q ss_pred cccCCCChHHHHHHHHhcccCCcEEEEEecCCC--CccchHHHHHHHHHHHHHCCcccccchhccc
Q 022411 67 SSSHELPGDQLLEEISRVLKPGGTILIYKKLTS--DKGDVDKAISALEGKLLLAGFLDAQRIQLKS 130 (297)
Q Consensus 67 ~~~~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~--~~g~~~~~~~~l~~~L~laGFv~v~~~~~kp 130 (297)
.. +......++.+++|+|||||+|++...... ....+..........+..+ |..++.....|
T Consensus 134 ~~-~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~-f~~~~~~~~~p 197 (210)
T 1nt2_A 134 IA-QKNQIEILKANAEFFLKEKGEVVIMVKARSIDSTAEPEEVFKSVLKEMEGD-FKIVKHGSLMP 197 (210)
T ss_dssp CC-STTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCTTSCHHHHHHHHHHHHHTT-SEEEEEEECTT
T ss_pred cc-ChhHHHHHHHHHHHHhCCCCEEEEEEecCCccccCCHHHHHHHHHHHHHhh-cEEeeeecCCC
Confidence 42 221134568999999999999998842210 0011222111122336667 88776554433
No 134
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=97.79 E-value=2.6e-05 Score=81.27 Aligned_cols=80 Identities=5% Similarity=0.012 Sum_probs=66.7
Q ss_pred CccChHHHHHHHHHHHHHHhhh-------cCCCeEEEEccCCCCCCCCCcccEEEeccccCCCCh---HHHHHHHHhccc
Q 022411 17 KILPVSAVLNAIRDLGDEAVEQ-------CDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG---DQLLEEISRVLK 86 (297)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~-------~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~~---~~~L~ei~RvLK 86 (297)
..++..|+++.|++.|++++.. ...++.++++|+..+|+.+++||+|++..+++|++. ..++.+++|+||
T Consensus 747 a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLK 826 (950)
T 3htx_A 747 QTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFH 826 (950)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTC
T ss_pred CeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcC
Confidence 3566779999999999875432 235799999999999999999999999999999983 358999999999
Q ss_pred CCcEEEEEecC
Q 022411 87 PGGTILIYKKL 97 (297)
Q Consensus 87 PGG~l~i~~~~ 97 (297)
|| .++|..+.
T Consensus 827 PG-~LIISTPN 836 (950)
T 3htx_A 827 PK-LLIVSTPN 836 (950)
T ss_dssp CS-EEEEEECB
T ss_pred CC-EEEEEecC
Confidence 99 77777654
No 135
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=97.79 E-value=2.3e-05 Score=65.62 Aligned_cols=103 Identities=10% Similarity=0.010 Sum_probs=74.4
Q ss_pred CceEEEeecCCc-----------cChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEeccccCCCC-h
Q 022411 7 QSAVLALSEDKI-----------LPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP-G 74 (297)
Q Consensus 7 ~~~VLll~~~~~-----------vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~-~ 74 (297)
+.+||-+--|+. ++..|+++.|++. ..++.++++|+.. ++++++||+|+++..+++.+ .
T Consensus 24 ~~~vLD~GcG~G~~~~~l~~~~~v~gvD~s~~~~~~--------~~~~~~~~~d~~~-~~~~~~fD~i~~n~~~~~~~~~ 94 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLRKRNTVVSTDLNIRALES--------HRGGNLVRADLLC-SINQESVDVVVFNPPYVPDTDD 94 (170)
T ss_dssp SCEEEEETCTTCHHHHHHTTTSEEEEEESCHHHHHT--------CSSSCEEECSTTT-TBCGGGCSEEEECCCCBTTCCC
T ss_pred CCeEEEeccCccHHHHHHHhcCcEEEEECCHHHHhc--------ccCCeEEECChhh-hcccCCCCEEEECCCCccCCcc
Confidence 456666655443 3344566666664 4578999999987 67779999999998887644 2
Q ss_pred ---------HHHHHHHHhcccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCcccccch
Q 022411 75 ---------DQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQRI 126 (297)
Q Consensus 75 ---------~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~~~ 126 (297)
..++.++.+.| |||++++..+... ..+.+...+..+||..+...
T Consensus 95 ~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~-------~~~~l~~~l~~~gf~~~~~~ 147 (170)
T 3q87_B 95 PIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEAN-------RPKEVLARLEERGYGTRILK 147 (170)
T ss_dssp TTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGG-------CHHHHHHHHHHTTCEEEEEE
T ss_pred ccccCCcchHHHHHHHHhhC-CCCEEEEEEecCC-------CHHHHHHHHHHCCCcEEEEE
Confidence 57889999999 9999999875431 12267778889999876543
No 136
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=97.78 E-value=2.4e-05 Score=70.32 Aligned_cols=109 Identities=10% Similarity=0.094 Sum_probs=78.1
Q ss_pred cCceEEEeecCC---------------ccChHHHHHHHHHHHHHHhhhcC--CCeEEEEccCCCCCCCCCcccEEEeccc
Q 022411 6 MQSAVLALSEDK---------------ILPVSAVLNAIRDLGDEAVEQCD--PQIITQASSLSQLPVESFSIDTVLSISS 68 (297)
Q Consensus 6 ~~~~VLll~~~~---------------~vt~~dlse~m~~~A~~~~~~~~--~~v~~~~~d~~~Lp~~d~sfD~Vls~~~ 68 (297)
.|.+||-+-.|+ .++..|+++.+++.|+++.+... .++.+..+|+... +++++||+|++...
T Consensus 112 ~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~V~~~~~ 190 (277)
T 1o54_A 112 EGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-FDEKDVDALFLDVP 190 (277)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-CSCCSEEEEEECCS
T ss_pred CCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-ccCCccCEEEECCc
Confidence 466777775443 23344567888888888765433 4799999999876 67789999998431
Q ss_pred cCCCChHHHHHHHHhcccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCcccccch
Q 022411 69 SHELPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQRI 126 (297)
Q Consensus 69 ~~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~~~ 126 (297)
.+..++.++.++|+|||+|++..+.. .....+...|..+||..++..
T Consensus 191 ----~~~~~l~~~~~~L~pgG~l~~~~~~~-------~~~~~~~~~l~~~gf~~~~~~ 237 (277)
T 1o54_A 191 ----DPWNYIDKCWEALKGGGRFATVCPTT-------NQVQETLKKLQELPFIRIEVW 237 (277)
T ss_dssp ----CGGGTHHHHHHHEEEEEEEEEEESSH-------HHHHHHHHHHHHSSEEEEEEE
T ss_pred ----CHHHHHHHHHHHcCCCCEEEEEeCCH-------HHHHHHHHHHHHCCCceeEEE
Confidence 14578999999999999999987542 122355566777999877654
No 137
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=97.77 E-value=2.7e-05 Score=72.81 Aligned_cols=86 Identities=13% Similarity=0.076 Sum_probs=64.4
Q ss_pred cCceEEEeecCC-------------ccChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCCCCCCCcccEEEecc---
Q 022411 6 MQSAVLALSEDK-------------ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSIS--- 67 (297)
Q Consensus 6 ~~~~VLll~~~~-------------~vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~Lp~~d~sfD~Vls~~--- 67 (297)
.+.+||-|--|+ .++..|+++ |++.|+++++.. ..++.++.+++..+++++++||+|++..
T Consensus 64 ~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~ 142 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMGY 142 (340)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCCBT
T ss_pred CCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCchh
Confidence 455677765444 233445664 888888766543 3689999999999999989999999876
Q ss_pred ccCCCC-hHHHHHHHHhcccCCcEEE
Q 022411 68 SSHELP-GDQLLEEISRVLKPGGTIL 92 (297)
Q Consensus 68 ~~~~~~-~~~~L~ei~RvLKPGG~l~ 92 (297)
.+++.. ...++.++.|+|||||+++
T Consensus 143 ~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 143 FLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp TBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 233344 5779999999999999997
No 138
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=97.76 E-value=3.3e-05 Score=72.65 Aligned_cols=84 Identities=17% Similarity=0.219 Sum_probs=61.8
Q ss_pred CCCeEEEEccCCCCCCCCCcccEEEeccccCCCC-hH--HHHHHHHhcccCCcEEEEEecCCCCc--cch----H-----
Q 022411 40 DPQIITQASSLSQLPVESFSIDTVLSISSSHELP-GD--QLLEEISRVLKPGGTILIYKKLTSDK--GDV----D----- 105 (297)
Q Consensus 40 ~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~-~~--~~L~ei~RvLKPGG~l~i~~~~~~~~--g~~----~----- 105 (297)
..++.++.+|+.. |++. ||+|++...+|+++ .. .+|++++|+|||||+|+|.+...... ... .
T Consensus 251 ~~~v~~~~~d~~~-~~~~--~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~ 327 (372)
T 1fp1_D 251 LSGIEHVGGDMFA-SVPQ--GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDN 327 (372)
T ss_dssp CTTEEEEECCTTT-CCCC--EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHH
T ss_pred cCCCEEEeCCccc-CCCC--CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhH
Confidence 3579999999977 7665 99999999999988 44 89999999999999999987532111 110 0
Q ss_pred ----------HHHHHHHHHHHHCCcccccch
Q 022411 106 ----------KAISALEGKLLLAGFLDAQRI 126 (297)
Q Consensus 106 ----------~~~~~l~~~L~laGFv~v~~~ 126 (297)
...+++...|..+||..++..
T Consensus 328 ~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~ 358 (372)
T 1fp1_D 328 LMFITVGGRERTEKQYEKLSKLSGFSKFQVA 358 (372)
T ss_dssp HHHHHHSCCCEEHHHHHHHHHHTTCSEEEEE
T ss_pred HHHhccCCccCCHHHHHHHHHHCCCceEEEE
Confidence 012456677888888876543
No 139
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=97.75 E-value=5.5e-05 Score=71.23 Aligned_cols=85 Identities=18% Similarity=0.198 Sum_probs=63.3
Q ss_pred CCCeEEEEccCCCCCCCCCcccEEEeccccCCCCh---HHHHHHHHhcccCCcEEEEEecCCCCc--cc-h-------H-
Q 022411 40 DPQIITQASSLSQLPVESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIYKKLTSDK--GD-V-------D- 105 (297)
Q Consensus 40 ~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~~---~~~L~ei~RvLKPGG~l~i~~~~~~~~--g~-~-------~- 105 (297)
..++.++.+|+.. |++.. |+|++...+|+++. ..+|++++|+|||||+|+|.+...... .. . +
T Consensus 243 ~~~v~~~~~D~~~-~~p~~--D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~ 319 (364)
T 3p9c_A 243 FPGVTHVGGDMFK-EVPSG--DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDM 319 (364)
T ss_dssp CTTEEEEECCTTT-CCCCC--SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHH
T ss_pred cCCeEEEeCCcCC-CCCCC--CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHH
Confidence 4689999999987 77765 99999999998872 578999999999999999998652211 00 0 0
Q ss_pred -----------HHHHHHHHHHHHCCcccccchh
Q 022411 106 -----------KAISALEGKLLLAGFLDAQRIQ 127 (297)
Q Consensus 106 -----------~~~~~l~~~L~laGFv~v~~~~ 127 (297)
.+.+++...|..+||..++...
T Consensus 320 ~m~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~~ 352 (364)
T 3p9c_A 320 IMLAHNPGGRERYEREFQALARGAGFTGVKSTY 352 (364)
T ss_dssp HHHHHCSSCCCCBHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHhcccCCccCCHHHHHHHHHHCCCceEEEEE
Confidence 0124577788889998876543
No 140
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=97.75 E-value=4e-05 Score=66.40 Aligned_cols=87 Identities=13% Similarity=0.073 Sum_probs=66.2
Q ss_pred ccCceEEEeecCCc------------cChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEeccccCCC
Q 022411 5 KMQSAVLALSEDKI------------LPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHEL 72 (297)
Q Consensus 5 ~~~~~VLll~~~~~------------vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~ 72 (297)
+.+.+||-+-.|+. ++..|+++.|++.++++..... ++.++.+++......+++||+|++...++++
T Consensus 69 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~ 147 (231)
T 1vbf_A 69 HKGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLSYYN-NIKLILGDGTLGYEEEKPYDRVVVWATAPTL 147 (231)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHTTCS-SEEEEESCGGGCCGGGCCEEEEEESSBBSSC
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHHhhcC-CeEEEECCcccccccCCCccEEEECCcHHHH
Confidence 34667888766543 3445667889999887765444 8999999998733356899999999988887
Q ss_pred ChHHHHHHHHhcccCCcEEEEEecC
Q 022411 73 PGDQLLEEISRVLKPGGTILIYKKL 97 (297)
Q Consensus 73 ~~~~~L~ei~RvLKPGG~l~i~~~~ 97 (297)
+ .++.++|||||++++....
T Consensus 148 ~-----~~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 148 L-----CKPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp C-----HHHHHTEEEEEEEEEEECS
T ss_pred H-----HHHHHHcCCCcEEEEEEcC
Confidence 6 3689999999999988754
No 141
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=97.74 E-value=1.1e-05 Score=69.40 Aligned_cols=81 Identities=12% Similarity=0.076 Sum_probs=62.0
Q ss_pred ccChHHHHHHHHHHHHHHhhhcC---CCeEEEEccCCCCCC--CCCc-ccEEEeccccCCCChHHHHHHH--HhcccCCc
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQCD---PQIITQASSLSQLPV--ESFS-IDTVLSISSSHELPGDQLLEEI--SRVLKPGG 89 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~---~~v~~~~~d~~~Lp~--~d~s-fD~Vls~~~~~~~~~~~~L~ei--~RvLKPGG 89 (297)
.|+..|+++.|++.|++++.... .++.++.+|+..+.. ++++ ||+|++...++.-....++.++ .|+|||||
T Consensus 78 ~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~~~~~~~~~~l~~~~~~~~LkpgG 157 (201)
T 2ift_A 78 KVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDPPFHFNLAEQAISLLCENNWLKPNA 157 (201)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEECCCSSSCHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEECCCCCCccHHHHHHHHHhcCccCCCc
Confidence 45566888999999998876543 589999999876532 3678 9999998775522257788888 77899999
Q ss_pred EEEEEecCC
Q 022411 90 TILIYKKLT 98 (297)
Q Consensus 90 ~l~i~~~~~ 98 (297)
.|++.....
T Consensus 158 ~l~i~~~~~ 166 (201)
T 2ift_A 158 LIYVETEKD 166 (201)
T ss_dssp EEEEEEESS
T ss_pred EEEEEECCC
Confidence 999876543
No 142
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=97.72 E-value=1.7e-05 Score=70.96 Aligned_cols=111 Identities=14% Similarity=0.094 Sum_probs=78.5
Q ss_pred ccCceEEEeecCC------------ccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEeccccCCC
Q 022411 5 KMQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHEL 72 (297)
Q Consensus 5 ~~~~~VLll~~~~------------~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~ 72 (297)
+.+.+||-+--|+ .++..|+++.+++.|++++......+.+..+++... +++.+||+|+++...++
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~-~~~~~fD~Vv~n~~~~~- 196 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA-LPFGPFDLLVANLYAEL- 196 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH-GGGCCEEEEEEECCHHH-
T ss_pred CCCCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhc-CcCCCCCEEEECCcHHH-
Confidence 3466777775544 334456667888888887654433388888888752 55789999998764433
Q ss_pred ChHHHHHHHHhcccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCcccccc
Q 022411 73 PGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQR 125 (297)
Q Consensus 73 ~~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~~ 125 (297)
...++.++.++|||||++++...... ....+...+..+||..+..
T Consensus 197 -~~~~l~~~~~~LkpgG~lils~~~~~-------~~~~v~~~l~~~Gf~~~~~ 241 (254)
T 2nxc_A 197 -HAALAPRYREALVPGGRALLTGILKD-------RAPLVREAMAGAGFRPLEE 241 (254)
T ss_dssp -HHHHHHHHHHHEEEEEEEEEEEEEGG-------GHHHHHHHHHHTTCEEEEE
T ss_pred -HHHHHHHHHHHcCCCCEEEEEeeccC-------CHHHHHHHHHHCCCEEEEE
Confidence 45789999999999999999765431 1236777888899987654
No 143
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=97.72 E-value=1.3e-06 Score=74.18 Aligned_cols=99 Identities=6% Similarity=-0.065 Sum_probs=53.7
Q ss_pred cChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCC-----CcccEEEeccccCCCC-h------------------
Q 022411 19 LPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVES-----FSIDTVLSISSSHELP-G------------------ 74 (297)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d-----~sfD~Vls~~~~~~~~-~------------------ 74 (297)
++..|+++.|++.|+++......++.++++|+.. ++++ ++||+|+++..+++.. .
T Consensus 57 v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (215)
T 4dzr_A 57 VTAVDLSMDALAVARRNAERFGAVVDWAAADGIE-WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDG 135 (215)
T ss_dssp EEEEECC-------------------CCHHHHHH-HHHHHHHTTCCBSEEEECCCCCC----------------------
T ss_pred EEEEECCHHHHHHHHHHHHHhCCceEEEEcchHh-hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccC
Confidence 3345667788888887654433378888888877 6666 8999999975443221 0
Q ss_pred --------HHHHHHHHhcccCCcEEEEEecCCCCccchHHHHHHHHHHHH--HCCcccccc
Q 022411 75 --------DQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLL--LAGFLDAQR 125 (297)
Q Consensus 75 --------~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~--laGFv~v~~ 125 (297)
..+++++.++|||||++++...... .. +.+...+. .+||..+..
T Consensus 136 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---~~----~~~~~~l~~~~~gf~~~~~ 189 (215)
T 4dzr_A 136 GEDGLQFYRRMAALPPYVLARGRAGVFLEVGHN---QA----DEVARLFAPWRERGFRVRK 189 (215)
T ss_dssp --CTTHHHHHHHTCCGGGBCSSSEEEEEECTTS---CH----HHHHHHTGGGGGGTEECCE
T ss_pred CCcHHHHHHHHHHHHHHHhcCCCeEEEEEECCc---cH----HHHHHHHHHhhcCCceEEE
Confidence 6788899999999999555554321 11 24555666 789977654
No 144
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=97.71 E-value=2e-05 Score=67.76 Aligned_cols=80 Identities=8% Similarity=-0.045 Sum_probs=62.3
Q ss_pred ccChHHHHHHHHHHHHHHhhhcC-CCeEEEEccCCC-CCCCCCcccEEEeccccCCCChHHHHHHHHh--cccCCcEEEE
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQCD-PQIITQASSLSQ-LPVESFSIDTVLSISSSHELPGDQLLEEISR--VLKPGGTILI 93 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~-~~v~~~~~d~~~-Lp~~d~sfD~Vls~~~~~~~~~~~~L~ei~R--vLKPGG~l~i 93 (297)
.|+..|+++.|++.|+++++... .++.++++|+.. ++..+++||+|++...++.-....++.++.+ +|+|||+|++
T Consensus 79 ~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~~~~~~~~~l~~l~~~~~L~pgG~l~i 158 (202)
T 2fpo_A 79 GATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYV 158 (202)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSSSTTTHHHHHHHHHHTTCEEEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCCCCCcHHHHHHHHHhcCccCCCcEEEE
Confidence 45566888999999998775543 589999999876 5666789999999877554335678888865 5999999998
Q ss_pred EecC
Q 022411 94 YKKL 97 (297)
Q Consensus 94 ~~~~ 97 (297)
....
T Consensus 159 ~~~~ 162 (202)
T 2fpo_A 159 ESEV 162 (202)
T ss_dssp EEEG
T ss_pred EECC
Confidence 7654
No 145
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=97.68 E-value=0.0001 Score=64.27 Aligned_cols=110 Identities=8% Similarity=0.046 Sum_probs=76.3
Q ss_pred ccCceEEEeecCCc------------cChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCCCCCCCcccEEEeccccC
Q 022411 5 KMQSAVLALSEDKI------------LPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSH 70 (297)
Q Consensus 5 ~~~~~VLll~~~~~------------vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~ 70 (297)
+.|.+||.+-.|+. ++..|+++.+++.|+++.+.. ..++.+..+++....+++..||+|++...
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~-- 167 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVDVR-- 167 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEECSS--
T ss_pred CCCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEECCc--
Confidence 45678888866542 334567788999988876543 36799999999875446788999998432
Q ss_pred CCChHHHHHHHHhcccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCcccccch
Q 022411 71 ELPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQRI 126 (297)
Q Consensus 71 ~~~~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~~~ 126 (297)
.+..++.++.++|+|||++++..+.. .....+...+... |.+++..
T Consensus 168 --~~~~~l~~~~~~L~~gG~l~~~~~~~-------~~~~~~~~~l~~~-f~~~~~~ 213 (248)
T 2yvl_A 168 --EPWHYLEKVHKSLMEGAPVGFLLPTA-------NQVIKLLESIENY-FGNLEVV 213 (248)
T ss_dssp --CGGGGHHHHHHHBCTTCEEEEEESSH-------HHHHHHHHHSTTT-EEEEEEE
T ss_pred --CHHHHHHHHHHHcCCCCEEEEEeCCH-------HHHHHHHHHHHhh-CCcceEE
Confidence 24578999999999999999987642 1122344444445 7766543
No 146
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=97.66 E-value=3e-05 Score=70.49 Aligned_cols=86 Identities=16% Similarity=0.072 Sum_probs=61.1
Q ss_pred cCceEEEeecC------------CccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCC-----CCCcccEEEeccc
Q 022411 6 MQSAVLALSED------------KILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPV-----ESFSIDTVLSISS 68 (297)
Q Consensus 6 ~~~~VLll~~~------------~~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~-----~d~sfD~Vls~~~ 68 (297)
.|.+||-|--| ..|+..|+++.|++.|++++.... +..++..++. .+++||+|++...
T Consensus 45 ~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~~~~-----v~~~~~~~~~~~~~~~~~~fD~Vv~~~~ 119 (261)
T 3iv6_A 45 PGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALADRC-----VTIDLLDITAEIPKELAGHFDFVLNDRL 119 (261)
T ss_dssp TTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTSSSC-----CEEEECCTTSCCCGGGTTCCSEEEEESC
T ss_pred CcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcc-----ceeeeeecccccccccCCCccEEEEhhh
Confidence 45566665443 345567889999999998764432 2223333322 2578999999998
Q ss_pred cCCCC---hHHHHHHHHhcccCCcEEEEEecC
Q 022411 69 SHELP---GDQLLEEISRVLKPGGTILIYKKL 97 (297)
Q Consensus 69 ~~~~~---~~~~L~ei~RvLKPGG~l~i~~~~ 97 (297)
+||+. ...++.++.++| |||+|++....
T Consensus 120 l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 120 INRFTTEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp GGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred hHhCCHHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 88876 357899999999 99999988654
No 147
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=97.66 E-value=3.4e-05 Score=71.94 Aligned_cols=78 Identities=17% Similarity=0.132 Sum_probs=62.7
Q ss_pred ccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEeccccCCC-----C-hHHHHHHHHhcccCCcEE
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHEL-----P-GDQLLEEISRVLKPGGTI 91 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~-----~-~~~~L~ei~RvLKPGG~l 91 (297)
.++..|+++.|++.++++.......+.+..+++...+ +++||+|+++..+|+. . ...++.+++|+|||||.|
T Consensus 222 ~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~--~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l 299 (343)
T 2pjd_A 222 RLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEV--KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGEL 299 (343)
T ss_dssp BCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTC--CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccc--cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEE
Confidence 5667788899999999887665555777888886543 7799999999888752 2 478999999999999999
Q ss_pred EEEecC
Q 022411 92 LIYKKL 97 (297)
Q Consensus 92 ~i~~~~ 97 (297)
++....
T Consensus 300 ~i~~~~ 305 (343)
T 2pjd_A 300 RIVANA 305 (343)
T ss_dssp EEEEET
T ss_pred EEEEcC
Confidence 998764
No 148
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=97.66 E-value=7e-05 Score=64.10 Aligned_cols=88 Identities=15% Similarity=0.188 Sum_probs=64.9
Q ss_pred ccCceEEEeecCC---------------ccChHHHHHHHHHHHHHHhhhc-CCCeEEEEccCCCCCCCCCcccEEEeccc
Q 022411 5 KMQSAVLALSEDK---------------ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVESFSIDTVLSISS 68 (297)
Q Consensus 5 ~~~~~VLll~~~~---------------~vt~~dlse~m~~~A~~~~~~~-~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~ 68 (297)
+.+.+||-+-.|+ .++..|.++.|++.++++.... ..++.+..+++......+.+||+|++...
T Consensus 76 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~ 155 (215)
T 2yxe_A 76 KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAPYDRIYTTAA 155 (215)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCCEEEEEESSB
T ss_pred CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCCeeEEEECCc
Confidence 3466788775543 3444566788888888766543 35699999988543223678999999998
Q ss_pred cCCCChHHHHHHHHhcccCCcEEEEEecC
Q 022411 69 SHELPGDQLLEEISRVLKPGGTILIYKKL 97 (297)
Q Consensus 69 ~~~~~~~~~L~ei~RvLKPGG~l~i~~~~ 97 (297)
+++++ .++.++|||||++++....
T Consensus 156 ~~~~~-----~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 156 GPKIP-----EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp BSSCC-----HHHHHTEEEEEEEEEEESS
T ss_pred hHHHH-----HHHHHHcCCCcEEEEEECC
Confidence 88876 4889999999999988754
No 149
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=97.65 E-value=8.4e-05 Score=61.18 Aligned_cols=103 Identities=5% Similarity=0.071 Sum_probs=76.4
Q ss_pred cCceEEEeecCC------------ccChHHHHHHHHHHHHHHhhhc-CCCeEEEEccCCCCCCCCCcccEEEeccccCCC
Q 022411 6 MQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVESFSIDTVLSISSSHEL 72 (297)
Q Consensus 6 ~~~~VLll~~~~------------~vt~~dlse~m~~~A~~~~~~~-~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~ 72 (297)
.+.+||-+--|+ .++..|+++.|++.++++.... ..++.++.+++.. ++++++||+|++... .
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~i~~~~~---~ 110 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-VLDKLEFNKAFIGGT---K 110 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-HGGGCCCSEEEECSC---S
T ss_pred CCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-cccCCCCcEEEECCc---c
Confidence 345666664443 3445577889999998876544 3579999999987 777889999999876 2
Q ss_pred ChHHHHHHHHhcccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCcc
Q 022411 73 PGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFL 121 (297)
Q Consensus 73 ~~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv 121 (297)
....++.++.++ |||.+++..+.. .....+...+..+||.
T Consensus 111 ~~~~~l~~~~~~--~gG~l~~~~~~~-------~~~~~~~~~l~~~g~~ 150 (183)
T 2yxd_A 111 NIEKIIEILDKK--KINHIVANTIVL-------ENAAKIINEFESRGYN 150 (183)
T ss_dssp CHHHHHHHHHHT--TCCEEEEEESCH-------HHHHHHHHHHHHTTCE
T ss_pred cHHHHHHHHhhC--CCCEEEEEeccc-------ccHHHHHHHHHHcCCe
Confidence 357889999999 999999987542 2234667788889975
No 150
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=97.63 E-value=7e-05 Score=60.84 Aligned_cols=93 Identities=17% Similarity=0.060 Sum_probs=63.9
Q ss_pred cccCceEEEeecCCccChHHHHHHHHHHHHHHhhh-------cCCCeEEEEccCCCCC--------CCCCcccEEEeccc
Q 022411 4 GKMQSAVLALSEDKILPVSAVLNAIRDLGDEAVEQ-------CDPQIITQASSLSQLP--------VESFSIDTVLSISS 68 (297)
Q Consensus 4 ~~~~~~VLll~~~~~vt~~dlse~m~~~A~~~~~~-------~~~~v~~~~~d~~~Lp--------~~d~sfD~Vls~~~ 68 (297)
.+.+.+||-+-.|+......+...+- ....+-. ...++.+..+++..++ +++++||+|++...
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~--~~~~v~~~D~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~~~ 97 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIG--GKGRIIACDLLPMDPIVGVDFLQGDFRDELVMKALLERVGDSKVQVVMSDMA 97 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHC--TTCEEEEEESSCCCCCTTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhC--CCCeEEEEECccccccCcEEEEEcccccchhhhhhhccCCCCceeEEEECCC
Confidence 35567888886666443333322210 0000000 1256889999998877 78889999999887
Q ss_pred cCCCC-h-----------HHHHHHHHhcccCCcEEEEEecCC
Q 022411 69 SHELP-G-----------DQLLEEISRVLKPGGTILIYKKLT 98 (297)
Q Consensus 69 ~~~~~-~-----------~~~L~ei~RvLKPGG~l~i~~~~~ 98 (297)
+++.. . ..++.++.++|+|||.+++..+..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 98 PNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred ccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 77765 3 588999999999999999987754
No 151
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=97.63 E-value=1.8e-05 Score=65.85 Aligned_cols=81 Identities=14% Similarity=0.006 Sum_probs=61.3
Q ss_pred ccChHHHHHHHHHHHHHHhhhcC--CCeEEEEccCCCC----CCCCCcccEEEeccccCCCChHHHHHHH--HhcccCCc
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQCD--PQIITQASSLSQL----PVESFSIDTVLSISSSHELPGDQLLEEI--SRVLKPGG 89 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~--~~v~~~~~d~~~L----p~~d~sfD~Vls~~~~~~~~~~~~L~ei--~RvLKPGG 89 (297)
.++..|+++.|++.|++++.... .++.++.+|+... ++.+++||+|++...++.......+..+ .|+|||||
T Consensus 69 ~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG 148 (187)
T 2fhp_A 69 KSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLDPPYAKQEIVSQLEKMLERQLLTNEA 148 (187)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCGGGCCHHHHHHHHHHTTCEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEECCCCCchhHHHHHHHHHHhcccCCCC
Confidence 34556788899999988765443 4799999998763 2236899999998775544456777888 99999999
Q ss_pred EEEEEecCC
Q 022411 90 TILIYKKLT 98 (297)
Q Consensus 90 ~l~i~~~~~ 98 (297)
.+++.....
T Consensus 149 ~l~~~~~~~ 157 (187)
T 2fhp_A 149 VIVCETDKT 157 (187)
T ss_dssp EEEEEEETT
T ss_pred EEEEEeCCc
Confidence 999887654
No 152
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=97.61 E-value=1.3e-05 Score=70.61 Aligned_cols=106 Identities=12% Similarity=0.172 Sum_probs=63.9
Q ss_pred cChHHHH-HHHHHHH---HHHhhhc-CCCeEEEEccCCCCCCC-CCcccEEEeccccCC-----C-ChHHHHHHHHhccc
Q 022411 19 LPVSAVL-NAIRDLG---DEAVEQC-DPQIITQASSLSQLPVE-SFSIDTVLSISSSHE-----L-PGDQLLEEISRVLK 86 (297)
Q Consensus 19 vt~~dls-e~m~~~A---~~~~~~~-~~~v~~~~~d~~~Lp~~-d~sfD~Vls~~~~~~-----~-~~~~~L~ei~RvLK 86 (297)
|+..|++ +.|+++| ++++... ..++.++.++++.+|.. ...||.|++++...+ . ....++.+++|+||
T Consensus 51 v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~Lk 130 (225)
T 3p2e_A 51 YIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSISILFPWGTLLEYVIKPNRDILSNVADLAK 130 (225)
T ss_dssp EEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEE
T ss_pred EEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcC
Confidence 4455777 7888776 5554433 46899999999988632 134455554432111 1 13568999999999
Q ss_pred CCcEEEEEecCCCCccc----------hHHH--H-HHHHHHHHHCCccccc
Q 022411 87 PGGTILIYKKLTSDKGD----------VDKA--I-SALEGKLLLAGFLDAQ 124 (297)
Q Consensus 87 PGG~l~i~~~~~~~~g~----------~~~~--~-~~l~~~L~laGFv~v~ 124 (297)
|||+|++.......... +... . .++...+..+||....
T Consensus 131 pGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~aGf~v~~ 181 (225)
T 3p2e_A 131 KEAHFEFVTTYSDSYEEAEIKKRGLPLLSKAYFLSEQYKAELSNSGFRIDD 181 (225)
T ss_dssp EEEEEEEEECCCC--------------CCHHHHHSHHHHHHHHHHTCEEEE
T ss_pred CCcEEEEEEeccccchhchhhhcCCCCCChhhcchHHHHHHHHHcCCCeee
Confidence 99999983322111000 0011 1 1377788889998554
No 153
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=97.61 E-value=6.5e-05 Score=68.10 Aligned_cols=99 Identities=8% Similarity=-0.011 Sum_probs=72.2
Q ss_pred cChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCCCCCCCcccEEEeccccCCCChHHHHHHHHhcccCCcEEEEEec
Q 022411 19 LPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKK 96 (297)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i~~~ 96 (297)
|+..|+++.|++.|+++++.. ..++.++.+|+..++. +.+||+|++..... ...++.+++++|||||.|++.+.
T Consensus 151 V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p~~---~~~~l~~~~~~LkpgG~l~~~~~ 226 (278)
T 2frn_A 151 VIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYVVR---THEFIPKALSIAKDGAIIHYHNT 226 (278)
T ss_dssp EEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCCSS---GGGGHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCchh---HHHHHHHHHHHCCCCeEEEEEEe
Confidence 556688889999999876543 3359999999998876 78999999865422 35789999999999999999876
Q ss_pred CCCCccchHHHHHHHHHHHHHCCccc
Q 022411 97 LTSDKGDVDKAISALEGKLLLAGFLD 122 (297)
Q Consensus 97 ~~~~~g~~~~~~~~l~~~L~laGFv~ 122 (297)
..... ......+.+...+..+||..
T Consensus 227 ~~~~~-~~~~~~~~i~~~~~~~G~~~ 251 (278)
T 2frn_A 227 VPEKL-MPREPFETFKRITKEYGYDV 251 (278)
T ss_dssp EEGGG-TTTTTHHHHHHHHHHTTCEE
T ss_pred ecccc-ccccHHHHHHHHHHHcCCee
Confidence 53110 00112336677788899964
No 154
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=97.60 E-value=8.1e-05 Score=66.72 Aligned_cols=77 Identities=8% Similarity=0.154 Sum_probs=57.9
Q ss_pred ChHHHHHHHHHHHHHHhhh---cC--CCeEEEEccCCCC-------CCCCCcccEEEeccccCCC---------------
Q 022411 20 PVSAVLNAIRDLGDEAVEQ---CD--PQIITQASSLSQL-------PVESFSIDTVLSISSSHEL--------------- 72 (297)
Q Consensus 20 t~~dlse~m~~~A~~~~~~---~~--~~v~~~~~d~~~L-------p~~d~sfD~Vls~~~~~~~--------------- 72 (297)
+..|+.+.|++.|++++.. .. .++.++.+|+..+ ++++++||+|+++..++..
T Consensus 64 ~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~ 143 (260)
T 2ozv_A 64 TLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHA 143 (260)
T ss_dssp EEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTCEEEEEECCCC------------------
T ss_pred EEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhh
Confidence 3456778999999887654 32 2599999999877 3668899999998543322
Q ss_pred ----ChHHHHHHHHhcccCCcEEEEEec
Q 022411 73 ----PGDQLLEEISRVLKPGGTILIYKK 96 (297)
Q Consensus 73 ----~~~~~L~ei~RvLKPGG~l~i~~~ 96 (297)
....++.++.++|||||+|++...
T Consensus 144 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 144 MTEGLFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp ---CCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 146789999999999999988654
No 155
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=97.60 E-value=8.2e-05 Score=69.49 Aligned_cols=80 Identities=16% Similarity=0.078 Sum_probs=62.8
Q ss_pred ccChHHHHHHHHHHHHHHhhhcC-CCeEEEEccCCCCCCCCCcccEEEeccccCCCC---------hHHHHHHHHhcccC
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQCD-PQIITQASSLSQLPVESFSIDTVLSISSSHELP---------GDQLLEEISRVLKP 87 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~-~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~---------~~~~L~ei~RvLKP 87 (297)
.+...|+.+.|++.|+++++... .++.+.++|+..++.+...||+|+++..+.+.. ...++.++.++|||
T Consensus 230 ~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~Lkp 309 (354)
T 3tma_A 230 PVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPP 309 (354)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCT
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCC
Confidence 34455677889999998876543 379999999999988888899999986654322 15788999999999
Q ss_pred CcEEEEEecC
Q 022411 88 GGTILIYKKL 97 (297)
Q Consensus 88 GG~l~i~~~~ 97 (297)
||++++..+.
T Consensus 310 gG~l~i~t~~ 319 (354)
T 3tma_A 310 GGRVALLTLR 319 (354)
T ss_dssp TCEEEEEESC
T ss_pred CcEEEEEeCC
Confidence 9999998764
No 156
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=97.58 E-value=7.9e-05 Score=64.76 Aligned_cols=73 Identities=8% Similarity=0.086 Sum_probs=56.4
Q ss_pred cChHHHHHHHHHHHHHHhhhc------CCCeEEEEccCCCCCCCC-CcccEEEeccccCCCChHHHHHHHHhcccCCcEE
Q 022411 19 LPVSAVLNAIRDLGDEAVEQC------DPQIITQASSLSQLPVES-FSIDTVLSISSSHELPGDQLLEEISRVLKPGGTI 91 (297)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~------~~~v~~~~~d~~~Lp~~d-~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l 91 (297)
++..|+++.|++.|+++.... ..++.+..+++.. ++++ ++||+|++....++++ .++.+.|||||+|
T Consensus 117 v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~fD~I~~~~~~~~~~-----~~~~~~LkpgG~l 190 (227)
T 1r18_A 117 IVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-GYPPNAPYNAIHVGAAAPDTP-----TELINQLASGGRL 190 (227)
T ss_dssp EEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-CCGGGCSEEEEEECSCBSSCC-----HHHHHTEEEEEEE
T ss_pred EEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-CCCcCCCccEEEECCchHHHH-----HHHHHHhcCCCEE
Confidence 344456678888888765442 4579999999886 4555 7899999998887765 6889999999999
Q ss_pred EEEecC
Q 022411 92 LIYKKL 97 (297)
Q Consensus 92 ~i~~~~ 97 (297)
++....
T Consensus 191 vi~~~~ 196 (227)
T 1r18_A 191 IVPVGP 196 (227)
T ss_dssp EEEESC
T ss_pred EEEEec
Confidence 987654
No 157
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=97.58 E-value=1.7e-06 Score=75.82 Aligned_cols=77 Identities=12% Similarity=0.034 Sum_probs=62.6
Q ss_pred CccChHHHHHHHHHHHHHHhhhcC--CCeEEEEccCCCCCCCCCcccEEEeccccCCCC-hHHHHHHHHhcccCCcEEEE
Q 022411 17 KILPVSAVLNAIRDLGDEAVEQCD--PQIITQASSLSQLPVESFSIDTVLSISSSHELP-GDQLLEEISRVLKPGGTILI 93 (297)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~~--~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~-~~~~L~ei~RvLKPGG~l~i 93 (297)
..++..|+++.|++.|++++.... .++.++++|+..++ ++.+||+|++...+++.. ....+.+++++|+|||.+++
T Consensus 101 ~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~L~pgG~~i~ 179 (241)
T 3gdh_A 101 MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPPWGGPDYATAETFDIRTMMSPDGFEIF 179 (241)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCCCSSGGGGGSSSBCTTTSCSSCHHHHH
T ss_pred CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCCcCCcchhhhHHHHHHhhcCCcceeHH
Confidence 345566888999999998876554 48999999998887 678999999998888876 44577889999999999764
Q ss_pred E
Q 022411 94 Y 94 (297)
Q Consensus 94 ~ 94 (297)
.
T Consensus 180 ~ 180 (241)
T 3gdh_A 180 R 180 (241)
T ss_dssp H
T ss_pred H
Confidence 4
No 158
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=97.58 E-value=0.0001 Score=63.73 Aligned_cols=89 Identities=12% Similarity=0.088 Sum_probs=66.6
Q ss_pred cccCceEEEeecCC---------------ccChHHHHHHHHHHHHHHhhhc------CCCeEEEEccCCCCCCCCCcccE
Q 022411 4 GKMQSAVLALSEDK---------------ILPVSAVLNAIRDLGDEAVEQC------DPQIITQASSLSQLPVESFSIDT 62 (297)
Q Consensus 4 ~~~~~~VLll~~~~---------------~vt~~dlse~m~~~A~~~~~~~------~~~v~~~~~d~~~Lp~~d~sfD~ 62 (297)
.+.+.+||-+-.|+ .++..|+++.|++.++++.... ..++.+..+++...+..+++||+
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 154 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDA 154 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCE
Confidence 44567788775443 3445566788888888776542 35799999999877666789999
Q ss_pred EEeccccCCCChHHHHHHHHhcccCCcEEEEEecC
Q 022411 63 VLSISSSHELPGDQLLEEISRVLKPGGTILIYKKL 97 (297)
Q Consensus 63 Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i~~~~ 97 (297)
|++....+++. .+++++|||||+|++....
T Consensus 155 i~~~~~~~~~~-----~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 155 IHVGAAAPVVP-----QALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp EEECSBBSSCC-----HHHHHTEEEEEEEEEEESC
T ss_pred EEECCchHHHH-----HHHHHhcCCCcEEEEEEec
Confidence 99988776543 6889999999999988654
No 159
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=97.56 E-value=5.3e-05 Score=69.82 Aligned_cols=87 Identities=17% Similarity=0.140 Sum_probs=66.7
Q ss_pred ccCceEEEeecCCc---------------cChHHHHHHHHHHHHHHhhhc-CCCeEEEEccCCCCCCCCCcccEEEeccc
Q 022411 5 KMQSAVLALSEDKI---------------LPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVESFSIDTVLSISS 68 (297)
Q Consensus 5 ~~~~~VLll~~~~~---------------vt~~dlse~m~~~A~~~~~~~-~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~ 68 (297)
+.|.+||-+--|+. |+..|++++|++.|+++.... ..++.++.+|+...+..+++||+|++...
T Consensus 74 ~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~fD~Iv~~~~ 153 (317)
T 1dl5_A 74 DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDVIFVTVG 153 (317)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEECSB
T ss_pred CCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCCCeEEEEEcCC
Confidence 34667777754432 444566788899988876543 35699999999886656789999999998
Q ss_pred cCCCChHHHHHHHHhcccCCcEEEEEec
Q 022411 69 SHELPGDQLLEEISRVLKPGGTILIYKK 96 (297)
Q Consensus 69 ~~~~~~~~~L~ei~RvLKPGG~l~i~~~ 96 (297)
+++++ .++.++|||||++++...
T Consensus 154 ~~~~~-----~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 154 VDEVP-----ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp BSCCC-----HHHHHHEEEEEEEEEEBC
T ss_pred HHHHH-----HHHHHhcCCCcEEEEEEC
Confidence 88876 578999999999998754
No 160
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=97.55 E-value=6.4e-05 Score=71.25 Aligned_cols=88 Identities=17% Similarity=0.171 Sum_probs=66.3
Q ss_pred cCceEEEeecCC-------------ccChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCCCCCCCcccEEEeccccC
Q 022411 6 MQSAVLALSEDK-------------ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSH 70 (297)
Q Consensus 6 ~~~~VLll~~~~-------------~vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~ 70 (297)
.+.+||-|--|+ .|+..|++ .|++.|++++... ..++.++.++++.++++ ++||+|++....+
T Consensus 63 ~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~Iv~~~~~~ 140 (376)
T 3r0q_C 63 EGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLP-EKVDVIISEWMGY 140 (376)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS-SCEEEEEECCCBT
T ss_pred CCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC-CcceEEEEcChhh
Confidence 456777775554 34455667 8888888776543 34599999999999887 8999999966444
Q ss_pred CC---C-hHHHHHHHHhcccCCcEEEEEe
Q 022411 71 EL---P-GDQLLEEISRVLKPGGTILIYK 95 (297)
Q Consensus 71 ~~---~-~~~~L~ei~RvLKPGG~l~i~~ 95 (297)
.+ . ...++.++.|+|||||.|++..
T Consensus 141 ~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 141 FLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp TBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred cccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 43 2 5678999999999999997653
No 161
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=97.55 E-value=7.2e-05 Score=64.70 Aligned_cols=89 Identities=16% Similarity=0.119 Sum_probs=66.9
Q ss_pred cccCceEEEeecCC-------------------ccChHHHHHHHHHHHHHHhhhc------CCCeEEEEccCCCCC----
Q 022411 4 GKMQSAVLALSEDK-------------------ILPVSAVLNAIRDLGDEAVEQC------DPQIITQASSLSQLP---- 54 (297)
Q Consensus 4 ~~~~~~VLll~~~~-------------------~vt~~dlse~m~~~A~~~~~~~------~~~v~~~~~d~~~Lp---- 54 (297)
.+.+.+||-+-.|+ .++..|+++.|++.|+++.... ..++.++.+|+...+
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 157 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEK 157 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccC
Confidence 34566777775443 3445566788888888776543 357999999998765
Q ss_pred CCCCcccEEEeccccCCCChHHHHHHHHhcccCCcEEEEEecC
Q 022411 55 VESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKL 97 (297)
Q Consensus 55 ~~d~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i~~~~ 97 (297)
+..++||+|++....+++. .++.+.|||||++++..+.
T Consensus 158 ~~~~~fD~I~~~~~~~~~~-----~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 158 KELGLFDAIHVGASASELP-----EILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp HHHCCEEEEEECSBBSSCC-----HHHHHHEEEEEEEEEEEEE
T ss_pred ccCCCcCEEEECCchHHHH-----HHHHHhcCCCcEEEEEEcc
Confidence 6678999999988777653 7889999999999988653
No 162
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=97.52 E-value=0.00013 Score=63.71 Aligned_cols=88 Identities=13% Similarity=0.162 Sum_probs=64.6
Q ss_pred ccCceEEEeecCC-------------ccChHHHHHHHHHHHHHHhhhc-CCCeEEEEccCCCCCCCCCc-ccEEEecccc
Q 022411 5 KMQSAVLALSEDK-------------ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVESFS-IDTVLSISSS 69 (297)
Q Consensus 5 ~~~~~VLll~~~~-------------~vt~~dlse~m~~~A~~~~~~~-~~~v~~~~~d~~~Lp~~d~s-fD~Vls~~~~ 69 (297)
+.+.+||-+-.|+ .++..|+++.+++.|+++.... ..++.+..+++ ..++++.. ||+|++...+
T Consensus 90 ~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~Ii~~~~~ 168 (235)
T 1jg1_A 90 KPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDG-SKGFPPKAPYDVIIVTAGA 168 (235)
T ss_dssp CTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG-GGCCGGGCCEEEEEECSBB
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCc-ccCCCCCCCccEEEECCcH
Confidence 3466788776553 3344456778888888876543 35699999987 44555554 9999999888
Q ss_pred CCCChHHHHHHHHhcccCCcEEEEEecCC
Q 022411 70 HELPGDQLLEEISRVLKPGGTILIYKKLT 98 (297)
Q Consensus 70 ~~~~~~~~L~ei~RvLKPGG~l~i~~~~~ 98 (297)
++++ .++.++|||||++++.....
T Consensus 169 ~~~~-----~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 169 PKIP-----EPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp SSCC-----HHHHHTEEEEEEEEEEECSS
T ss_pred HHHH-----HHHHHhcCCCcEEEEEEecC
Confidence 8766 37899999999999887643
No 163
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=97.52 E-value=0.00026 Score=63.11 Aligned_cols=125 Identities=16% Similarity=0.054 Sum_probs=72.5
Q ss_pred cccCceEEEeecCCccC---------------hHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCC---CCCcccEEEe
Q 022411 4 GKMQSAVLALSEDKILP---------------VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPV---ESFSIDTVLS 65 (297)
Q Consensus 4 ~~~~~~VLll~~~~~vt---------------~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~---~d~sfD~Vls 65 (297)
++.|.+||-|--++... ..|+++.|++...+.+.. ..++.++.+|+..... ..++||+|++
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~-r~nv~~i~~Da~~~~~~~~~~~~~D~I~~ 152 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR-RPNIFPLLADARFPQSYKSVVENVDVLYV 152 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH-CTTEEEEECCTTCGGGTTTTCCCEEEEEE
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh-cCCeEEEEcccccchhhhccccceEEEEe
Confidence 45678888886554332 224455554333222222 3689999999876431 2468999999
Q ss_pred ccccCCCChHHHHHHHHhcccCCcEEEEEecCCC---CccchHHHHHHHHHHHHHCCcccccchhcccc
Q 022411 66 ISSSHELPGDQLLEEISRVLKPGGTILIYKKLTS---DKGDVDKAISALEGKLLLAGFLDAQRIQLKSV 131 (297)
Q Consensus 66 ~~~~~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~---~~g~~~~~~~~l~~~L~laGFv~v~~~~~kp~ 131 (297)
..+... ....++..+.+.|||||+|++...... +.. +..........|..+||...+.....|.
T Consensus 153 d~a~~~-~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~-~~e~~~~~~~~L~~~gf~~~~~~~l~p~ 219 (232)
T 3id6_C 153 DIAQPD-QTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKD-PKEIYKTEVEKLENSNFETIQIINLDPY 219 (232)
T ss_dssp CCCCTT-HHHHHHHHHHHHEEEEEEEEEEEC-------CC-SSSSTTHHHHHHHHTTEEEEEEEECTTT
T ss_pred cCCChh-HHHHHHHHHHHhCCCCeEEEEEEccCCcccCCC-HHHHHHHHHHHHHHCCCEEEEEeccCCC
Confidence 865311 123345556669999999998742211 100 0001124556777889998776665554
No 164
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=97.50 E-value=0.00016 Score=66.89 Aligned_cols=101 Identities=18% Similarity=0.073 Sum_probs=67.7
Q ss_pred cChHHHHHHHHHHHHHHhhhc-CCCeEEEEccCCCCCCCCCcccEEEeccc------cCCCC-----------------h
Q 022411 19 LPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVESFSIDTVLSISS------SHELP-----------------G 74 (297)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~-~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~------~~~~~-----------------~ 74 (297)
++..|+++.|++.++++++.. ..++.++.+|+..++..+++||+|++... ++..+ .
T Consensus 146 v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q 225 (315)
T 1ixk_A 146 IYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQ 225 (315)
T ss_dssp EEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHH
T ss_pred EEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHH
Confidence 445577788999998877654 34799999999988765678999998532 11111 0
Q ss_pred HHHHHHHHhcccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCcccc
Q 022411 75 DQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDA 123 (297)
Q Consensus 75 ~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v 123 (297)
..+|.+++++|||||+|++.+..-...+. .. .+...+...||..+
T Consensus 226 ~~~L~~~~~~LkpGG~lv~stcs~~~~En-e~---~v~~~l~~~~~~~~ 270 (315)
T 1ixk_A 226 MRLLEKGLEVLKPGGILVYSTCSLEPEEN-EF---VIQWALDNFDVELL 270 (315)
T ss_dssp HHHHHHHHHHEEEEEEEEEEESCCCGGGT-HH---HHHHHHHHSSEEEE
T ss_pred HHHHHHHHHhCCCCCEEEEEeCCCChHHh-HH---HHHHHHhcCCCEEe
Confidence 47899999999999999987654321111 11 23344555777644
No 165
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=97.50 E-value=0.0004 Score=60.05 Aligned_cols=88 Identities=16% Similarity=0.049 Sum_probs=61.1
Q ss_pred ccCceEEEeecCCcc---------------ChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCC---CCCCcccEEEec
Q 022411 5 KMQSAVLALSEDKIL---------------PVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLP---VESFSIDTVLSI 66 (297)
Q Consensus 5 ~~~~~VLll~~~~~v---------------t~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp---~~d~sfD~Vls~ 66 (297)
+.|.+||-+.-|+.. +..|+++.|++.+++++... .++.++.+++.... ....+||+|++.
T Consensus 72 ~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~D~v~~~ 150 (227)
T 1g8a_A 72 KPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER-RNIVPILGDATKPEEYRALVPKVDVIFED 150 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC-TTEEEEECCTTCGGGGTTTCCCEEEEEEC
T ss_pred CCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc-CCCEEEEccCCCcchhhcccCCceEEEEC
Confidence 456678877655432 23355677877777765443 78999999998632 123589999986
Q ss_pred cccCCCC-hHHHHHHHHhcccCCcEEEEEe
Q 022411 67 SSSHELP-GDQLLEEISRVLKPGGTILIYK 95 (297)
Q Consensus 67 ~~~~~~~-~~~~L~ei~RvLKPGG~l~i~~ 95 (297)
.. ... ...++.+++++|||||+|++..
T Consensus 151 ~~--~~~~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 151 VA--QPTQAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp CC--STTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CC--CHhHHHHHHHHHHHhcCCCCEEEEEE
Confidence 54 112 2355999999999999998873
No 166
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=97.50 E-value=2.9e-05 Score=74.98 Aligned_cols=57 Identities=18% Similarity=0.138 Sum_probs=49.2
Q ss_pred CCCeEEEEccCCCCCCC------CCcccEEEeccccCCCC-hHHHHHHHHhcccCCcEEEEEecC
Q 022411 40 DPQIITQASSLSQLPVE------SFSIDTVLSISSSHELP-GDQLLEEISRVLKPGGTILIYKKL 97 (297)
Q Consensus 40 ~~~v~~~~~d~~~Lp~~------d~sfD~Vls~~~~~~~~-~~~~L~ei~RvLKPGG~l~i~~~~ 97 (297)
..++.++++|+.++|+. +++||+|++.. .|++. ...+|++++|+|||||+|++.+..
T Consensus 263 ~~rI~fv~GDa~dlpf~~~l~~~d~sFDlVisdg-sH~~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 263 ELRIRTIQGDQNDAEFLDRIARRYGPFDIVIDDG-SHINAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp BTTEEEEECCTTCHHHHHHHHHHHCCEEEEEECS-CCCHHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred CCCcEEEEecccccchhhhhhcccCCccEEEECC-cccchhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 46899999999999988 78999999875 45554 678999999999999999998764
No 167
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=97.49 E-value=0.00012 Score=67.89 Aligned_cols=72 Identities=19% Similarity=0.152 Sum_probs=55.4
Q ss_pred ChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCCCCCCCcccEEEeccccC---CCC-hHHHHHHHHhcccCCcEEE
Q 022411 20 PVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSH---ELP-GDQLLEEISRVLKPGGTIL 92 (297)
Q Consensus 20 t~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~---~~~-~~~~L~ei~RvLKPGG~l~ 92 (297)
+..|++ .|++.|+++++.. ..++.++.+++..+++++++||+|++....+ +.. ...++.++.|+|||||+++
T Consensus 65 ~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 65 IGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp EEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred EEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEE
Confidence 344555 5788888766443 3569999999999998889999999875322 223 5788999999999999997
No 168
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=97.48 E-value=9.7e-05 Score=62.72 Aligned_cols=86 Identities=12% Similarity=0.075 Sum_probs=63.7
Q ss_pred CceEEEeecCCcc--------------ChHHHHHHHHHHHHHHhhhc-CCCeEEEEccCCCCCCCCCcccEEEeccccCC
Q 022411 7 QSAVLALSEDKIL--------------PVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVESFSIDTVLSISSSHE 71 (297)
Q Consensus 7 ~~~VLll~~~~~v--------------t~~dlse~m~~~A~~~~~~~-~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~ 71 (297)
+.+||-+-.|+.. +..|+++.|++.+++++... ..++.+..+++..++ +.++||+|++...
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~D~i~~~~~--- 141 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP-SEPPFDGVISRAF--- 141 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC-CCSCEEEEECSCS---
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC-ccCCcCEEEEecc---
Confidence 4567766544433 34456788999988876554 345999999998876 5678999997542
Q ss_pred CChHHHHHHHHhcccCCcEEEEEec
Q 022411 72 LPGDQLLEEISRVLKPGGTILIYKK 96 (297)
Q Consensus 72 ~~~~~~L~ei~RvLKPGG~l~i~~~ 96 (297)
.+...++.++.++|+|||.+++...
T Consensus 142 ~~~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 142 ASLNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp SSHHHHHHHHTTSEEEEEEEEEEES
T ss_pred CCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 2257899999999999999998754
No 169
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=97.48 E-value=0.00024 Score=66.22 Aligned_cols=84 Identities=15% Similarity=0.220 Sum_probs=62.0
Q ss_pred CCCeEEEEccCCCCCCCCCcccEEEeccccCCCC-hH--HHHHHHHhcccC---CcEEEEEecCCCCccc------hHH-
Q 022411 40 DPQIITQASSLSQLPVESFSIDTVLSISSSHELP-GD--QLLEEISRVLKP---GGTILIYKKLTSDKGD------VDK- 106 (297)
Q Consensus 40 ~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~-~~--~~L~ei~RvLKP---GG~l~i~~~~~~~~g~------~~~- 106 (297)
..++.++.+|+.. |++ .||+|++...+|+++ .. .+|++++|+||| ||+|+|.+........ ...
T Consensus 235 ~~~v~~~~~d~~~-~~~--~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~ 311 (358)
T 1zg3_A 235 NENLNFVGGDMFK-SIP--SADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLD 311 (358)
T ss_dssp CSSEEEEECCTTT-CCC--CCSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHH
T ss_pred CCCcEEEeCccCC-CCC--CceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHh
Confidence 3569999999987 766 499999999999888 45 899999999999 9999998764221111 000
Q ss_pred --------------HHHHHHHHHHHCCcccccch
Q 022411 107 --------------AISALEGKLLLAGFLDAQRI 126 (297)
Q Consensus 107 --------------~~~~l~~~L~laGFv~v~~~ 126 (297)
..+++...|..+||..++..
T Consensus 312 ~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~ 345 (358)
T 1zg3_A 312 YDLVMLTMFLGKERTKQEWEKLIYDAGFSSYKIT 345 (358)
T ss_dssp HHHHHHHHHSCCCEEHHHHHHHHHHTTCCEEEEE
T ss_pred hCHHHhccCCCCCCCHHHHHHHHHHcCCCeeEEE
Confidence 12456677888888876543
No 170
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=97.47 E-value=2.4e-05 Score=64.97 Aligned_cols=81 Identities=6% Similarity=-0.035 Sum_probs=60.4
Q ss_pred ccChHHHHHHHHHHHHHHhhhcC--CCeEEEEccCCC-CCCCCCcccEEEeccccCCCChHHHHHHHH--hcccCCcEEE
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQCD--PQIITQASSLSQ-LPVESFSIDTVLSISSSHELPGDQLLEEIS--RVLKPGGTIL 92 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~--~~v~~~~~d~~~-Lp~~d~sfD~Vls~~~~~~~~~~~~L~ei~--RvLKPGG~l~ 92 (297)
.++..|+++.|++.|++++.... .++.++.+|+.. ++..++.||+|++...++.......+..+. ++|||||.++
T Consensus 56 ~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~ 135 (177)
T 2esr_A 56 AAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPPYAKETIVATIEALAAKNLLSEQVMVV 135 (177)
T ss_dssp EEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCSSHHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCCCCcchHHHHHHHHHhCCCcCCCcEEE
Confidence 34455788899999988765542 469999999876 454557799999986654322456777777 9999999999
Q ss_pred EEecCC
Q 022411 93 IYKKLT 98 (297)
Q Consensus 93 i~~~~~ 98 (297)
+.....
T Consensus 136 ~~~~~~ 141 (177)
T 2esr_A 136 CETDKT 141 (177)
T ss_dssp EEEETT
T ss_pred EEECCc
Confidence 887654
No 171
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=97.45 E-value=0.0001 Score=70.00 Aligned_cols=80 Identities=16% Similarity=0.100 Sum_probs=60.8
Q ss_pred CccChHHHHHHHHHHHHHHhhhcC----CCeEEEEccCCCCCCCCCcccEEEeccccCCC---C---hHHHHHHHHhccc
Q 022411 17 KILPVSAVLNAIRDLGDEAVEQCD----PQIITQASSLSQLPVESFSIDTVLSISSSHEL---P---GDQLLEEISRVLK 86 (297)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~~----~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~---~---~~~~L~ei~RvLK 86 (297)
..++..|+++.|++.|++++.... .++.+..+|+.. ++++++||+|+++..+|+. . ...++.++.++||
T Consensus 247 ~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~Lk 325 (375)
T 4dcm_A 247 AKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLK 325 (375)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-TCCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEE
T ss_pred CEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-cCCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCC
Confidence 345566788899999988765432 358889999987 5678899999999887752 2 2468999999999
Q ss_pred CCcEEEEEecC
Q 022411 87 PGGTILIYKKL 97 (297)
Q Consensus 87 PGG~l~i~~~~ 97 (297)
|||+|++....
T Consensus 326 pgG~l~iv~n~ 336 (375)
T 4dcm_A 326 INGELYIVANR 336 (375)
T ss_dssp EEEEEEEEEET
T ss_pred CCcEEEEEEEC
Confidence 99999987654
No 172
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=97.44 E-value=0.00012 Score=64.53 Aligned_cols=77 Identities=16% Similarity=0.189 Sum_probs=58.1
Q ss_pred cChHHHHHHHHHHHHHHhhh---------cCCCeEEEEccCCC-CC--CCCCcccEEEeccccCCCC---------hHHH
Q 022411 19 LPVSAVLNAIRDLGDEAVEQ---------CDPQIITQASSLSQ-LP--VESFSIDTVLSISSSHELP---------GDQL 77 (297)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~---------~~~~v~~~~~d~~~-Lp--~~d~sfD~Vls~~~~~~~~---------~~~~ 77 (297)
++..|+++.|++.+++++.. ...++.++.+|+.. ++ +++++||.|+..+.-.|.. ...+
T Consensus 76 v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~ 155 (246)
T 2vdv_E 76 ILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQLSKMFFCFPDPHFKQRKHKARIITNTL 155 (246)
T ss_dssp EEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTCEEEEEEESCCCC------CSSCCCHHH
T ss_pred EEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccccCEEEEECCCcccccchhHHhhccHHH
Confidence 44557788888888876543 23589999999986 67 7889999999776433321 1479
Q ss_pred HHHHHhcccCCcEEEEEe
Q 022411 78 LEEISRVLKPGGTILIYK 95 (297)
Q Consensus 78 L~ei~RvLKPGG~l~i~~ 95 (297)
+.++.++|||||.|++..
T Consensus 156 l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 156 LSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp HHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHcCCCCEEEEEe
Confidence 999999999999999864
No 173
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=97.42 E-value=4.2e-05 Score=67.19 Aligned_cols=78 Identities=12% Similarity=0.125 Sum_probs=59.2
Q ss_pred CccChHHHHHHHHHHHHHHhhhc--C-CCeEEEEccCCCC-C-CCCCcccEEEeccccCCCChHHHHHHHHhcccCCcEE
Q 022411 17 KILPVSAVLNAIRDLGDEAVEQC--D-PQIITQASSLSQL-P-VESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTI 91 (297)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~--~-~~v~~~~~d~~~L-p-~~d~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l 91 (297)
..++..|++++|++.|+++.+.. . .++.++.+++..+ + +++++||+|++...... ...++.+++|+|||||.|
T Consensus 82 ~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d~~~~~--~~~~l~~~~~~LkpGG~l 159 (221)
T 3dr5_A 82 TTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQVSPMD--LKALVDAAWPLLRRGGAL 159 (221)
T ss_dssp SEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEECCCTTT--HHHHHHHHHHHEEEEEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEcCcHHH--HHHHHHHHHHHcCCCcEE
Confidence 45566788899999999877654 2 4799999988654 2 44789999998653221 356899999999999999
Q ss_pred EEEec
Q 022411 92 LIYKK 96 (297)
Q Consensus 92 ~i~~~ 96 (297)
++.+.
T Consensus 160 v~dn~ 164 (221)
T 3dr5_A 160 VLADA 164 (221)
T ss_dssp EETTT
T ss_pred EEeCC
Confidence 98654
No 174
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=97.42 E-value=0.00022 Score=65.55 Aligned_cols=91 Identities=15% Similarity=0.205 Sum_probs=63.0
Q ss_pred cCceEEEeecCCc--------------cChHHHHHHHHHHHHHHhhh------cCCCeEEEEccCCCC-CCCCCcccEEE
Q 022411 6 MQSAVLALSEDKI--------------LPVSAVLNAIRDLGDEAVEQ------CDPQIITQASSLSQL-PVESFSIDTVL 64 (297)
Q Consensus 6 ~~~~VLll~~~~~--------------vt~~dlse~m~~~A~~~~~~------~~~~v~~~~~d~~~L-p~~d~sfD~Vl 64 (297)
+..+||.|-.|+. ++..|+.+.|++.|+++... ..+++.++.+|+... +..+++||+|+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi 162 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEE
Confidence 3457777755433 34557778899999886543 256899999998653 44578999999
Q ss_pred eccccCCCC-----hHHHHHHHHhcccCCcEEEEEec
Q 022411 65 SISSSHELP-----GDQLLEEISRVLKPGGTILIYKK 96 (297)
Q Consensus 65 s~~~~~~~~-----~~~~L~ei~RvLKPGG~l~i~~~ 96 (297)
+.....+.+ ...+++++.|+|||||+|++...
T Consensus 163 ~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 199 (294)
T 3adn_A 163 SDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp ECC----------CCHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecC
Confidence 976443322 26799999999999999998753
No 175
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=97.42 E-value=5.5e-05 Score=65.57 Aligned_cols=80 Identities=13% Similarity=0.140 Sum_probs=58.8
Q ss_pred CccChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCC-CCCCC-----CcccEEEeccccCCCC-hHHHHHHHHhcccC
Q 022411 17 KILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQ-LPVES-----FSIDTVLSISSSHELP-GDQLLEEISRVLKP 87 (297)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~-Lp~~d-----~sfD~Vls~~~~~~~~-~~~~L~ei~RvLKP 87 (297)
..++..|+++.|++.|+++++.. ..++.++.+++.. ++... ++||+|++....++.. ...++.++ ++|||
T Consensus 84 ~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~Lkp 162 (221)
T 3u81_A 84 ARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRK 162 (221)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCT
T ss_pred CEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEEEEEcCCcccchHHHHHHHhc-cccCC
Confidence 34556688899999999876554 2469999999754 33222 7899999987666554 44567667 99999
Q ss_pred CcEEEEEecC
Q 022411 88 GGTILIYKKL 97 (297)
Q Consensus 88 GG~l~i~~~~ 97 (297)
||+|++.+..
T Consensus 163 gG~lv~~~~~ 172 (221)
T 3u81_A 163 GTVLLADNVI 172 (221)
T ss_dssp TCEEEESCCC
T ss_pred CeEEEEeCCC
Confidence 9999987655
No 176
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=97.39 E-value=0.00011 Score=68.79 Aligned_cols=80 Identities=15% Similarity=0.140 Sum_probs=60.2
Q ss_pred ccChHHHHHHHHHHHHHHhhhc-CCCeEEEEccCCCC--CCCCCcccEEEeccccCCC-----ChHHHHHHHHhcccCCc
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQL--PVESFSIDTVLSISSSHEL-----PGDQLLEEISRVLKPGG 89 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~-~~~v~~~~~d~~~L--p~~d~sfD~Vls~~~~~~~-----~~~~~L~ei~RvLKPGG 89 (297)
.++..++.++|++.|+++.... ..++.++.+|+..+ .+++++||+|++....++. ....++++++|+|+|||
T Consensus 115 ~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~~~~~~~L~t~efl~~~~r~LkpgG 194 (317)
T 3gjy_A 115 RNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPGG 194 (317)
T ss_dssp EEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEEE
T ss_pred EEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCCccccchhhhHHHHHHHHHHhcCCCc
Confidence 3455677789999998865432 56899999998654 3457899999987543322 13789999999999999
Q ss_pred EEEEEecC
Q 022411 90 TILIYKKL 97 (297)
Q Consensus 90 ~l~i~~~~ 97 (297)
+|++....
T Consensus 195 vlv~~~~~ 202 (317)
T 3gjy_A 195 LYVANCGD 202 (317)
T ss_dssp EEEEEEEE
T ss_pred EEEEEecC
Confidence 99988754
No 177
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=97.35 E-value=3.1e-05 Score=63.33 Aligned_cols=79 Identities=11% Similarity=0.081 Sum_probs=58.2
Q ss_pred cChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCC-C-CC--CCcccEEEeccccCCCChHHHHHHHH--hcccCCcEEE
Q 022411 19 LPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQL-P-VE--SFSIDTVLSISSSHELPGDQLLEEIS--RVLKPGGTIL 92 (297)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~L-p-~~--d~sfD~Vls~~~~~~~~~~~~L~ei~--RvLKPGG~l~ 92 (297)
++..|+++.|++.|+++......++.++.+++... + ++ ..+||+|++...++ ......+..+. ++|||||.++
T Consensus 66 v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~~~-~~~~~~~~~~~~~~~L~~gG~~~ 144 (171)
T 1ws6_A 66 AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAPPYA-MDLAALFGELLASGLVEAGGLYV 144 (171)
T ss_dssp EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECCCTT-SCTTHHHHHHHHHTCEEEEEEEE
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECCCCc-hhHHHHHHHHHhhcccCCCcEEE
Confidence 44557778999999887655433899999988763 3 11 24899999987665 23456777777 9999999999
Q ss_pred EEecCC
Q 022411 93 IYKKLT 98 (297)
Q Consensus 93 i~~~~~ 98 (297)
+.....
T Consensus 145 ~~~~~~ 150 (171)
T 1ws6_A 145 LQHPKD 150 (171)
T ss_dssp EEEETT
T ss_pred EEeCCc
Confidence 887654
No 178
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=97.34 E-value=7.2e-05 Score=65.58 Aligned_cols=79 Identities=10% Similarity=0.106 Sum_probs=59.6
Q ss_pred CccChHHHHHHHHHHHHHHhhhcC--CCeEEEEccCCCC-C-CCCCcccEEEeccccCCCChHHHHHHHHhcccCCcEEE
Q 022411 17 KILPVSAVLNAIRDLGDEAVEQCD--PQIITQASSLSQL-P-VESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTIL 92 (297)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~~--~~v~~~~~d~~~L-p-~~d~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~ 92 (297)
..++..|+++.|++.|+++.+... .++.++.+++... + ..+++||+|++..... ....++.++.++|||||+|+
T Consensus 96 ~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~~~--~~~~~l~~~~~~LkpgG~lv 173 (232)
T 3ntv_A 96 IHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDAAKA--QSKKFFEIYTPLLKHQGLVI 173 (232)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEETTSS--SHHHHHHHHGGGEEEEEEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcCcHH--HHHHHHHHHHHhcCCCeEEE
Confidence 344566788899999998775543 4799999999754 4 3478999999764322 24678999999999999998
Q ss_pred EEecC
Q 022411 93 IYKKL 97 (297)
Q Consensus 93 i~~~~ 97 (297)
+.+..
T Consensus 174 ~d~~~ 178 (232)
T 3ntv_A 174 TDNVL 178 (232)
T ss_dssp EECTT
T ss_pred EeeCC
Confidence 86543
No 179
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=97.32 E-value=0.00012 Score=67.62 Aligned_cols=89 Identities=17% Similarity=0.121 Sum_probs=60.6
Q ss_pred ccCceEEEeecCC---------------ccChHHHHHHHHHHHHHHhhhc------------CCCeEEEEccCCCC--CC
Q 022411 5 KMQSAVLALSEDK---------------ILPVSAVLNAIRDLGDEAVEQC------------DPQIITQASSLSQL--PV 55 (297)
Q Consensus 5 ~~~~~VLll~~~~---------------~vt~~dlse~m~~~A~~~~~~~------------~~~v~~~~~d~~~L--p~ 55 (297)
+.|.+||-+-.|+ .+...|+++.+++.|+++.... ..++.+..+|+..+ ++
T Consensus 104 ~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~ 183 (336)
T 2b25_A 104 NPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDI 183 (336)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC---
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccccc
Confidence 4466777765443 2334466788888888876531 35799999999876 56
Q ss_pred CCCcccEEEeccccCCCChHHHHHHHHhcccCCcEEEEEecC
Q 022411 56 ESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKL 97 (297)
Q Consensus 56 ~d~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i~~~~ 97 (297)
++++||+|++..... ..++.+++++|||||+|++..+.
T Consensus 184 ~~~~fD~V~~~~~~~----~~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 184 KSLTFDAVALDMLNP----HVTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp ----EEEEEECSSST----TTTHHHHGGGEEEEEEEEEEESS
T ss_pred CCCCeeEEEECCCCH----HHHHHHHHHhcCCCcEEEEEeCC
Confidence 778999999865322 34789999999999999988764
No 180
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=97.29 E-value=0.00026 Score=65.70 Aligned_cols=90 Identities=16% Similarity=0.175 Sum_probs=62.2
Q ss_pred cCceEEEeecCC--------------ccChHHHHHHHHHHHHHHhhhc-----CCCeEEEEccCCC-CCCCCCcccEEEe
Q 022411 6 MQSAVLALSEDK--------------ILPVSAVLNAIRDLGDEAVEQC-----DPQIITQASSLSQ-LPVESFSIDTVLS 65 (297)
Q Consensus 6 ~~~~VLll~~~~--------------~vt~~dlse~m~~~A~~~~~~~-----~~~v~~~~~d~~~-Lp~~d~sfD~Vls 65 (297)
+..+||.|-.|+ .++..|+.+.|++.|+++.... .+++.++.+|+.. ++..+++||+|++
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 187 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIIT 187 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEE
Confidence 345677775443 3345577789999999876432 5689999999865 4445688999998
Q ss_pred ccccCCCC-----hHHHHHHHHhcccCCcEEEEEe
Q 022411 66 ISSSHELP-----GDQLLEEISRVLKPGGTILIYK 95 (297)
Q Consensus 66 ~~~~~~~~-----~~~~L~ei~RvLKPGG~l~i~~ 95 (297)
....++-+ ...+++++.++|+|||.|++..
T Consensus 188 d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 188 DSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp CCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred cCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 76433222 1688999999999999999875
No 181
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=97.28 E-value=0.00011 Score=65.17 Aligned_cols=79 Identities=14% Similarity=0.093 Sum_probs=58.4
Q ss_pred CccChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCC-CCCC--CCcccEEEeccccCCCChHHHHHHHHhcccCCcEE
Q 022411 17 KILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQ-LPVE--SFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTI 91 (297)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~-Lp~~--d~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l 91 (297)
..++..|+++.|++.|+++.+.. ..++.++.+++.. ++.. .++||+|++..... ....++.++.++|||||+|
T Consensus 89 ~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~d~~~~--~~~~~l~~~~~~LkpGG~l 166 (248)
T 3tfw_A 89 GQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFIDADKP--NNPHYLRWALRYSRPGTLI 166 (248)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEECSCGG--GHHHHHHHHHHTCCTTCEE
T ss_pred CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEECCchH--HHHHHHHHHHHhcCCCeEE
Confidence 34556677889999999877543 3479999999865 4432 34899999865321 1457899999999999999
Q ss_pred EEEecC
Q 022411 92 LIYKKL 97 (297)
Q Consensus 92 ~i~~~~ 97 (297)
++.+..
T Consensus 167 v~~~~~ 172 (248)
T 3tfw_A 167 IGDNVV 172 (248)
T ss_dssp EEECCS
T ss_pred EEeCCC
Confidence 987654
No 182
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=97.27 E-value=0.00023 Score=65.62 Aligned_cols=78 Identities=14% Similarity=-0.046 Sum_probs=56.4
Q ss_pred CCeEE-EEccCCCCCCCCCcccEEEeccccCC-----------CC-hHHHHHHHHhcccCCcEEEEEecCCCCccchHHH
Q 022411 41 PQIIT-QASSLSQLPVESFSIDTVLSISSSHE-----------LP-GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKA 107 (297)
Q Consensus 41 ~~v~~-~~~d~~~Lp~~d~sfD~Vls~~~~~~-----------~~-~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~ 107 (297)
.++.+ +++|+..++++ ++||+|+++...++ .. ...+++++.|+|||||+|++..+.... ..
T Consensus 105 ~~v~~~i~gD~~~~~~~-~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~---~~-- 178 (290)
T 2xyq_A 105 SDADSTLIGDCATVHTA-NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW---NA-- 178 (290)
T ss_dssp CSSSEEEESCGGGCCCS-SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC---CH--
T ss_pred CCCEEEEECccccCCcc-CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCC---HH--
Confidence 36888 99999988765 68999999753222 11 247899999999999999997765421 11
Q ss_pred HHHHHHHHHHCCcccccch
Q 022411 108 ISALEGKLLLAGFLDAQRI 126 (297)
Q Consensus 108 ~~~l~~~L~laGFv~v~~~ 126 (297)
++...+...||..+...
T Consensus 179 --~l~~~l~~~GF~~v~~~ 195 (290)
T 2xyq_A 179 --DLYKLMGHFSWWTAFVT 195 (290)
T ss_dssp --HHHHHHTTEEEEEEEEE
T ss_pred --HHHHHHHHcCCcEEEEE
Confidence 45566777889776544
No 183
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=97.27 E-value=0.00022 Score=64.72 Aligned_cols=103 Identities=12% Similarity=0.105 Sum_probs=67.7
Q ss_pred cChHHHHHHHHHHHHHHhhh-----cCCCeEEEEccCCC-CCCCCCcccEEEeccccCCCC-----hHHHHHHHHhcccC
Q 022411 19 LPVSAVLNAIRDLGDEAVEQ-----CDPQIITQASSLSQ-LPVESFSIDTVLSISSSHELP-----GDQLLEEISRVLKP 87 (297)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~-----~~~~v~~~~~d~~~-Lp~~d~sfD~Vls~~~~~~~~-----~~~~L~ei~RvLKP 87 (297)
++..|+.+.|++.|+++... ..+++.++.+|+.. ++..+++||+|++....++.+ ...+++++.|+|||
T Consensus 102 v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~p 181 (275)
T 1iy9_A 102 ATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKE 181 (275)
T ss_dssp EEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEE
T ss_pred EEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCC
Confidence 33456778899999876532 25689999999865 444467899999976544322 36899999999999
Q ss_pred CcEEEEEecCCCCccchHHHHHHHHHHHHHCCcccccc
Q 022411 88 GGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQR 125 (297)
Q Consensus 88 GG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~~ 125 (297)
||.+++....... . ......+.+.+... |..+..
T Consensus 182 gG~lv~~~~~~~~--~-~~~~~~~~~~l~~~-F~~v~~ 215 (275)
T 1iy9_A 182 DGIFVAQTDNPWF--T-PELITNVQRDVKEI-FPITKL 215 (275)
T ss_dssp EEEEEEECCCTTT--C-HHHHHHHHHHHHTT-CSEEEE
T ss_pred CcEEEEEcCCccc--c-HHHHHHHHHHHHHh-CCCeEE
Confidence 9999987532210 1 12223444444443 665543
No 184
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=97.22 E-value=0.00036 Score=58.84 Aligned_cols=93 Identities=13% Similarity=0.138 Sum_probs=60.0
Q ss_pred cccCceEEEeecCCccChHHHHHHHHHHHHHHh---h----hcCCCeEEEEccCCCCC----------------------
Q 022411 4 GKMQSAVLALSEDKILPVSAVLNAIRDLGDEAV---E----QCDPQIITQASSLSQLP---------------------- 54 (297)
Q Consensus 4 ~~~~~~VLll~~~~~vt~~dlse~m~~~A~~~~---~----~~~~~v~~~~~d~~~Lp---------------------- 54 (297)
.+.+.+||-|--|+..-...+...+-.. ...+ . ....++.++++|+..++
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~-~~~v~gvD~s~~~~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~~~~ 98 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNY-KNKIIGIDKKIMDPIPNVYFIQGEIGKDNMNNIKNINYIDNMNNNSVDYKL 98 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTS-CEEEEEEESSCCCCCTTCEEEECCTTTTSSCCC-----------CHHHHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCC-CceEEEEeCCccCCCCCceEEEccccchhhhhhccccccccccchhhHHHH
Confidence 3556778888666554333332221100 0001 0 01246889999998877
Q ss_pred ---CCCCcccEEEeccccCCCC-----h-------HHHHHHHHhcccCCcEEEEEecC
Q 022411 55 ---VESFSIDTVLSISSSHELP-----G-------DQLLEEISRVLKPGGTILIYKKL 97 (297)
Q Consensus 55 ---~~d~sfD~Vls~~~~~~~~-----~-------~~~L~ei~RvLKPGG~l~i~~~~ 97 (297)
+++.+||+|++....++.. . ..++.+++|+|||||.|++..+.
T Consensus 99 ~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 156 (201)
T 2plw_A 99 KEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYL 156 (201)
T ss_dssp HHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeC
Confidence 6778999999987766631 1 13788999999999999987654
No 185
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=97.21 E-value=0.00026 Score=66.20 Aligned_cols=87 Identities=13% Similarity=0.130 Sum_probs=62.1
Q ss_pred cCceEEEeecCCc-------------cChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCCCCCCCcccEEEeccccC
Q 022411 6 MQSAVLALSEDKI-------------LPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSH 70 (297)
Q Consensus 6 ~~~~VLll~~~~~-------------vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~ 70 (297)
.+.+||-|--|+. |+..|+++ |.+.|+++++.. ..++.++.+++..++++ ++||+|++....+
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~-~~~D~Ivs~~~~~ 127 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMGY 127 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEEECCCBT
T ss_pred CcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCC-CceeEEEEeCchh
Confidence 4556777655442 33334553 777777765443 36799999999998876 5799999987655
Q ss_pred CCC---hHHHHHHHHhcccCCcEEEEE
Q 022411 71 ELP---GDQLLEEISRVLKPGGTILIY 94 (297)
Q Consensus 71 ~~~---~~~~L~ei~RvLKPGG~l~i~ 94 (297)
++. ....+.++.|+|||||.+++.
T Consensus 128 ~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 128 MLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp TBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred cCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 443 357788999999999999854
No 186
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=97.18 E-value=0.00012 Score=67.64 Aligned_cols=90 Identities=13% Similarity=0.177 Sum_probs=66.5
Q ss_pred cCceEEEeecCC--------------ccChHHHHHHHHHHHHHHhhh-----c-CCCeEEEEccCCC-CCCCCCcccEEE
Q 022411 6 MQSAVLALSEDK--------------ILPVSAVLNAIRDLGDEAVEQ-----C-DPQIITQASSLSQ-LPVESFSIDTVL 64 (297)
Q Consensus 6 ~~~~VLll~~~~--------------~vt~~dlse~m~~~A~~~~~~-----~-~~~v~~~~~d~~~-Lp~~d~sfD~Vl 64 (297)
++.+||.|--|+ .++..|+.+.|++.|+++... . .+++.++.+|+.. ++..+++||+|+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVI 156 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEE
Confidence 345677775443 234557778899999876543 2 5789999999876 454578999999
Q ss_pred eccccCC---CC-----hHHHHHHHHhcccCCcEEEEEe
Q 022411 65 SISSSHE---LP-----GDQLLEEISRVLKPGGTILIYK 95 (297)
Q Consensus 65 s~~~~~~---~~-----~~~~L~ei~RvLKPGG~l~i~~ 95 (297)
+....++ -+ ...+++++.|+|||||.|++..
T Consensus 157 ~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 157 IDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp EECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred ECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 9876554 21 3688999999999999999874
No 187
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=97.17 E-value=0.00019 Score=62.39 Aligned_cols=78 Identities=15% Similarity=0.101 Sum_probs=58.7
Q ss_pred ccChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCC-CCC--CCcccEEEeccccCCCChHHHHHHHHhcccCCcEEE
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQL-PVE--SFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTIL 92 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~L-p~~--d~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~ 92 (297)
.++..|+++.+++.|+++.... ..++.++.+++... +.. +++||+|++....+ ....++.++.++|||||+++
T Consensus 80 ~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~~~--~~~~~l~~~~~~L~pgG~lv 157 (233)
T 2gpy_A 80 TIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFIDAAKG--QYRRFFDMYSPMVRPGGLIL 157 (233)
T ss_dssp EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEEGGGS--CHHHHHHHHGGGEEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEECCCHH--HHHHHHHHHHHHcCCCeEEE
Confidence 3445567788899988876543 24699999998764 433 57899999876543 24678999999999999999
Q ss_pred EEecC
Q 022411 93 IYKKL 97 (297)
Q Consensus 93 i~~~~ 97 (297)
+.+..
T Consensus 158 ~~~~~ 162 (233)
T 2gpy_A 158 SDNVL 162 (233)
T ss_dssp EETTT
T ss_pred EEcCC
Confidence 87643
No 188
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=97.17 E-value=0.00015 Score=62.16 Aligned_cols=77 Identities=10% Similarity=0.081 Sum_probs=57.1
Q ss_pred CccChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCC-CCCCCcccEEEeccccCCCChHHHHHHHHhcccCCcEEEE
Q 022411 17 KILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQL-PVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILI 93 (297)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~L-p~~d~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i 93 (297)
..++..|+++.|++.|+++.+.. ..++.++.+++..+ +..++ ||+|++... ......++.++.++|||||+|++
T Consensus 82 ~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~~--~~~~~~~l~~~~~~LkpgG~lv~ 158 (210)
T 3c3p_A 82 SRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDCD--VFNGADVLERMNRCLAKNALLIA 158 (210)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEETT--TSCHHHHHHHHGGGEEEEEEEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcCC--hhhhHHHHHHHHHhcCCCeEEEE
Confidence 34556677889999998876543 34699999988643 54456 999998742 12256889999999999999998
Q ss_pred Eec
Q 022411 94 YKK 96 (297)
Q Consensus 94 ~~~ 96 (297)
.+.
T Consensus 159 ~~~ 161 (210)
T 3c3p_A 159 VNA 161 (210)
T ss_dssp ESS
T ss_pred ECc
Confidence 654
No 189
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=97.16 E-value=0.00056 Score=62.18 Aligned_cols=91 Identities=15% Similarity=0.194 Sum_probs=65.6
Q ss_pred cCceEEEeecCC--------------ccChHHHHHHHHHHHHHHhhhc-----CCCeEEEEccCCCC-CCCCCcccEEEe
Q 022411 6 MQSAVLALSEDK--------------ILPVSAVLNAIRDLGDEAVEQC-----DPQIITQASSLSQL-PVESFSIDTVLS 65 (297)
Q Consensus 6 ~~~~VLll~~~~--------------~vt~~dlse~m~~~A~~~~~~~-----~~~v~~~~~d~~~L-p~~d~sfD~Vls 65 (297)
++.+||.|--|. .++..|+.+.|++.|+++.... .+++.++.+|+... +..+++||+|++
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 157 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 157 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEE
Confidence 455788775543 3345567788999998865432 57899999998653 333678999998
Q ss_pred ccccCCCC-----hHHHHHHHHhcccCCcEEEEEec
Q 022411 66 ISSSHELP-----GDQLLEEISRVLKPGGTILIYKK 96 (297)
Q Consensus 66 ~~~~~~~~-----~~~~L~ei~RvLKPGG~l~i~~~ 96 (297)
....++.+ ...+++++.|+|+|||.+++...
T Consensus 158 d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 158 DSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp ECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred cCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 65433322 16899999999999999998753
No 190
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=97.16 E-value=0.00017 Score=63.66 Aligned_cols=52 Identities=15% Similarity=0.131 Sum_probs=39.2
Q ss_pred EEEccCCCCCC-----CCCcccEEEeccccCCCC----------hHHHHHHHHhcccCCcEEEEEec
Q 022411 45 TQASSLSQLPV-----ESFSIDTVLSISSSHELP----------GDQLLEEISRVLKPGGTILIYKK 96 (297)
Q Consensus 45 ~~~~d~~~Lp~-----~d~sfD~Vls~~~~~~~~----------~~~~L~ei~RvLKPGG~l~i~~~ 96 (297)
+..+|+..... ...+||+|+++..++... ...++.+++++|||||+|++...
T Consensus 149 ~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 215 (250)
T 1o9g_A 149 IRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVIAVTDR 215 (250)
T ss_dssp EEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEEEEEES
T ss_pred eeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEEEEeCc
Confidence 88999876321 345899999986544332 24899999999999999998544
No 191
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=97.12 E-value=7.3e-05 Score=65.42 Aligned_cols=79 Identities=10% Similarity=0.024 Sum_probs=59.2
Q ss_pred CCccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEeccccCCCC-hHHHHHHHHhcccCCcEEEEE
Q 022411 16 DKILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP-GDQLLEEISRVLKPGGTILIY 94 (297)
Q Consensus 16 ~~~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~-~~~~L~ei~RvLKPGG~l~i~ 94 (297)
.+.+..-|+.+.|++.++++++.......+..++.... .+...||+|++...+|++. .+..+..+++.|||||.|+-.
T Consensus 73 ~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~-~~~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pggvfISf 151 (200)
T 3fzg_A 73 KIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESD-VYKGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVISF 151 (200)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHH-HTTSEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEEEEEEE
T ss_pred CCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEeccccc-CCCCCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEEEe
Confidence 33444668999999999998766544323333555433 4578899999999999986 456677999999999999877
Q ss_pred e
Q 022411 95 K 95 (297)
Q Consensus 95 ~ 95 (297)
.
T Consensus 152 p 152 (200)
T 3fzg_A 152 P 152 (200)
T ss_dssp E
T ss_pred C
Confidence 6
No 192
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=97.11 E-value=0.00038 Score=63.82 Aligned_cols=90 Identities=12% Similarity=0.115 Sum_probs=62.6
Q ss_pred CceEEEeecCC--------------ccChHHHHHHHHHHHHHHhhh----c-CCCeEEEEccCCC-CCCCCCcccEEEec
Q 022411 7 QSAVLALSEDK--------------ILPVSAVLNAIRDLGDEAVEQ----C-DPQIITQASSLSQ-LPVESFSIDTVLSI 66 (297)
Q Consensus 7 ~~~VLll~~~~--------------~vt~~dlse~m~~~A~~~~~~----~-~~~v~~~~~d~~~-Lp~~d~sfD~Vls~ 66 (297)
+.+||.|--|+ .++..|+.+.|++.|+++... . .+++.++.+|+.. ++..+++||+|++.
T Consensus 91 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d 170 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIIID 170 (296)
T ss_dssp CCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEEc
Confidence 45677775543 234557778899998876532 2 5789999999765 44456789999986
Q ss_pred cccCCCC------hHHHHHHHHhcccCCcEEEEEec
Q 022411 67 SSSHELP------GDQLLEEISRVLKPGGTILIYKK 96 (297)
Q Consensus 67 ~~~~~~~------~~~~L~ei~RvLKPGG~l~i~~~ 96 (297)
...+++. ...+++++.++|||||.|++...
T Consensus 171 ~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 206 (296)
T 1inl_A 171 STDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETE 206 (296)
T ss_dssp C----------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred CCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEcc
Confidence 5433221 26889999999999999998743
No 193
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=97.10 E-value=0.00022 Score=66.78 Aligned_cols=76 Identities=18% Similarity=0.283 Sum_probs=57.2
Q ss_pred cChHHHHHHHHHHHHHHhhh-----cCCCeEEEEccCCCC--CCCCCcccEEEeccccCCCC-----hHHHHHHHHhccc
Q 022411 19 LPVSAVLNAIRDLGDEAVEQ-----CDPQIITQASSLSQL--PVESFSIDTVLSISSSHELP-----GDQLLEEISRVLK 86 (297)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~-----~~~~v~~~~~d~~~L--p~~d~sfD~Vls~~~~~~~~-----~~~~L~ei~RvLK 86 (297)
++..|+++.|++.|+++... ...++.++.+|+... .+++++||+|++.....+.+ ...+++++.|+|+
T Consensus 147 V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~Lk 226 (334)
T 1xj5_A 147 IDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALR 226 (334)
T ss_dssp EEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEE
T ss_pred EEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcC
Confidence 44567888999999887543 256899999998653 23467999999865422211 3689999999999
Q ss_pred CCcEEEEE
Q 022411 87 PGGTILIY 94 (297)
Q Consensus 87 PGG~l~i~ 94 (297)
|||.|++.
T Consensus 227 pgG~lv~~ 234 (334)
T 1xj5_A 227 PGGVVCTQ 234 (334)
T ss_dssp EEEEEEEE
T ss_pred CCcEEEEe
Confidence 99999986
No 194
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=97.10 E-value=0.00016 Score=66.76 Aligned_cols=91 Identities=10% Similarity=0.129 Sum_probs=64.5
Q ss_pred cCceEEEeecCC--------------ccChHHHHHHHHHHHHHHhhh-----cCCCeEEEEccCCC-CCCCCCcccEEEe
Q 022411 6 MQSAVLALSEDK--------------ILPVSAVLNAIRDLGDEAVEQ-----CDPQIITQASSLSQ-LPVESFSIDTVLS 65 (297)
Q Consensus 6 ~~~~VLll~~~~--------------~vt~~dlse~m~~~A~~~~~~-----~~~~v~~~~~d~~~-Lp~~d~sfD~Vls 65 (297)
++.+||.|--|+ .++..|+.+.|++.|+++... ...++.++.+|+.. ++..+++||+|++
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~ 174 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIIT 174 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEE
Confidence 455777775543 334557778999999886543 25789999999865 4545789999998
Q ss_pred ccccCCCC-----hHHHHHHHHhcccCCcEEEEEec
Q 022411 66 ISSSHELP-----GDQLLEEISRVLKPGGTILIYKK 96 (297)
Q Consensus 66 ~~~~~~~~-----~~~~L~ei~RvLKPGG~l~i~~~ 96 (297)
....++.+ ...+++++.|+|+|||.|++...
T Consensus 175 d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 210 (304)
T 2o07_A 175 DSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGE 210 (304)
T ss_dssp ECC-----------CHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecC
Confidence 76543322 25689999999999999998763
No 195
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=97.07 E-value=0.00038 Score=64.68 Aligned_cols=91 Identities=16% Similarity=0.204 Sum_probs=65.3
Q ss_pred cCceEEEeecCC--------------ccChHHHHHHHHHHHHHHhhh----c-CCCeEEEEccCCC-CCCCCCcccEEEe
Q 022411 6 MQSAVLALSEDK--------------ILPVSAVLNAIRDLGDEAVEQ----C-DPQIITQASSLSQ-LPVESFSIDTVLS 65 (297)
Q Consensus 6 ~~~~VLll~~~~--------------~vt~~dlse~m~~~A~~~~~~----~-~~~v~~~~~d~~~-Lp~~d~sfD~Vls 65 (297)
++.+||.|-.|+ .++..|+.+.|++.|+++... . .+++.++.+|+.. ++..+++||+|++
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~ 195 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 195 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEE
Confidence 345677775543 344557788999999887543 1 5689999999865 3334678999998
Q ss_pred ccccCCCC-----hHHHHHHHHhcccCCcEEEEEec
Q 022411 66 ISSSHELP-----GDQLLEEISRVLKPGGTILIYKK 96 (297)
Q Consensus 66 ~~~~~~~~-----~~~~L~ei~RvLKPGG~l~i~~~ 96 (297)
....++-+ ...+++++.++|||||.+++...
T Consensus 196 d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 231 (321)
T 2pt6_A 196 DSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 231 (321)
T ss_dssp ECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 75322211 26899999999999999998754
No 196
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=97.06 E-value=0.00038 Score=62.83 Aligned_cols=76 Identities=12% Similarity=0.030 Sum_probs=59.6
Q ss_pred cChHHHHHHHHHHHHHHhhhc-CCCeEEEEccCCCCCCCCCcccEEEeccccCCCChHHHHHHHHhcccCCcEEEEEecC
Q 022411 19 LPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKL 97 (297)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~-~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i~~~~ 97 (297)
|+..|+++.+++.|+++++.. ..++.++.+|+..++. ..+||+|++.... ....++.++.+.|||||.+++....
T Consensus 146 V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~p~---~~~~~l~~~~~~LkpgG~l~~s~~~ 221 (272)
T 3a27_A 146 VYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVEL-KDVADRVIMGYVH---KTHKFLDKTFEFLKDRGVIHYHETV 221 (272)
T ss_dssp EEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCC-TTCEEEEEECCCS---SGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCc-cCCceEEEECCcc---cHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 445567788999998876543 3578999999988754 6789999988653 3456889999999999999988765
Q ss_pred C
Q 022411 98 T 98 (297)
Q Consensus 98 ~ 98 (297)
.
T Consensus 222 ~ 222 (272)
T 3a27_A 222 A 222 (272)
T ss_dssp E
T ss_pred c
Confidence 3
No 197
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=97.05 E-value=8.8e-05 Score=65.66 Aligned_cols=55 Identities=13% Similarity=0.100 Sum_probs=43.3
Q ss_pred CCCeEEEEccCCCC---CCCC-CcccEEEeccccCCCChHHHHHHHHh-cccCCcEEEEEec
Q 022411 40 DPQIITQASSLSQL---PVES-FSIDTVLSISSSHELPGDQLLEEISR-VLKPGGTILIYKK 96 (297)
Q Consensus 40 ~~~v~~~~~d~~~L---p~~d-~sfD~Vls~~~~~~~~~~~~L~ei~R-vLKPGG~l~i~~~ 96 (297)
..++.++++|+..+ ++.. .+||+|++... | .....++.+++| +|||||+|++.+.
T Consensus 129 ~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~~-~-~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 129 MENITLHQGDCSDLTTFEHLREMAHPLIFIDNA-H-ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp CTTEEEEECCSSCSGGGGGGSSSCSSEEEEESS-C-SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred CCceEEEECcchhHHHHHhhccCCCCEEEECCc-h-HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 35799999999874 6544 47999998664 3 345678999998 9999999998764
No 198
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=97.03 E-value=0.0009 Score=65.02 Aligned_cols=70 Identities=14% Similarity=-0.019 Sum_probs=47.8
Q ss_pred HHHHHHHHhhhc---CCCeEEEEccCCCC--CC--CCCcccEEEeccccCCCChHHHHHHHHhcccCCcEEEEEecC
Q 022411 28 IRDLGDEAVEQC---DPQIITQASSLSQL--PV--ESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKL 97 (297)
Q Consensus 28 m~~~A~~~~~~~---~~~v~~~~~d~~~L--p~--~d~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i~~~~ 97 (297)
|++.+++++... ..++.++.++.... ++ ..++||+|+++..++.-....+|.+++|+|||||+|++.+..
T Consensus 285 Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~~~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~d~f 361 (433)
T 1u2z_A 285 QYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAELIPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLKSL 361 (433)
T ss_dssp HHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHHHGGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESSCS
T ss_pred hHHHHHHHHHHcCCCCCceEEEEcCccccccccccccCCCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEeecc
Confidence 444447766543 26899988754322 22 357899999875543222567889999999999999987543
No 199
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=96.99 E-value=0.0012 Score=59.76 Aligned_cols=106 Identities=10% Similarity=0.030 Sum_probs=66.4
Q ss_pred ccChHHH-HHHHHHHHHHHh-----hhcC------CCeEEEEccCCCC--CC----CCCcccEEEeccccCCCC-hHHHH
Q 022411 18 ILPVSAV-LNAIRDLGDEAV-----EQCD------PQIITQASSLSQL--PV----ESFSIDTVLSISSSHELP-GDQLL 78 (297)
Q Consensus 18 ~vt~~dl-se~m~~~A~~~~-----~~~~------~~v~~~~~d~~~L--p~----~d~sfD~Vls~~~~~~~~-~~~~L 78 (297)
.|+..|+ ++.|++.|++++ .... .++.+...+.... .+ ++.+||+|++...+++.+ ...++
T Consensus 104 ~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll 183 (281)
T 3bzb_A 104 QVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALL 183 (281)
T ss_dssp EEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHH
T ss_pred EEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhhccCCCCCEEEEeCcccChHHHHHHH
Confidence 4556677 789999988876 2221 3677775443321 11 367899999977777766 68899
Q ss_pred HHHHhccc---C--CcEEEEEecCCCCccchHHHHHHHHHHHHHCC-cccccc
Q 022411 79 EEISRVLK---P--GGTILIYKKLTSDKGDVDKAISALEGKLLLAG-FLDAQR 125 (297)
Q Consensus 79 ~ei~RvLK---P--GG~l~i~~~~~~~~g~~~~~~~~l~~~L~laG-Fv~v~~ 125 (297)
+++.++|+ | ||++++.-.... .........+...+..+| |.....
T Consensus 184 ~~l~~~Lk~~~p~~gG~l~v~~~~~~--~~~~~~~~~~~~~l~~~G~f~v~~~ 234 (281)
T 3bzb_A 184 RSVKMLLALPANDPTAVALVTFTHHR--PHLAERDLAFFRLVNADGALIAEPW 234 (281)
T ss_dssp HHHHHHBCCTTTCTTCEEEEEECC----------CTHHHHHHHHSTTEEEEEE
T ss_pred HHHHHHhcccCCCCCCEEEEEEEeee--cccchhHHHHHHHHHhcCCEEEEEe
Confidence 99999999 9 999876533211 000111124555678899 876543
No 200
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=96.95 E-value=0.0017 Score=62.87 Aligned_cols=81 Identities=20% Similarity=0.161 Sum_probs=59.3
Q ss_pred ccChHHHHHHHHHHHHHHhhhc-CCCeEEEEccCCCCC--CCCCcccEEEecc------ccCCCC-h-------------
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLP--VESFSIDTVLSIS------SSHELP-G------------- 74 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~-~~~v~~~~~d~~~Lp--~~d~sfD~Vls~~------~~~~~~-~------------- 74 (297)
.++..|+++.+++.++++++.. ..++.++.+|+..++ +++++||+|++.. .++..+ .
T Consensus 286 ~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~ 365 (450)
T 2yxl_A 286 KIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMS 365 (450)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHH
T ss_pred EEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHH
Confidence 3445567788888888877654 347999999998876 6668899999732 122222 1
Q ss_pred ---HHHHHHHHhcccCCcEEEEEecCC
Q 022411 75 ---DQLLEEISRVLKPGGTILIYKKLT 98 (297)
Q Consensus 75 ---~~~L~ei~RvLKPGG~l~i~~~~~ 98 (297)
..++.++.++|||||+|++.+...
T Consensus 366 ~~q~~iL~~a~~~LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 366 QLQRELLESAARLVKPGGRLLYTTCSI 392 (450)
T ss_dssp HHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 468999999999999999887543
No 201
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=96.94 E-value=0.00015 Score=62.49 Aligned_cols=78 Identities=21% Similarity=0.192 Sum_probs=57.6
Q ss_pred CccChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCC-C-CCC----CcccEEEeccccCCCC-hHHHHHHHHhcccC
Q 022411 17 KILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQL-P-VES----FSIDTVLSISSSHELP-GDQLLEEISRVLKP 87 (297)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~L-p-~~d----~sfD~Vls~~~~~~~~-~~~~L~ei~RvLKP 87 (297)
..++..|+++.|++.|+++.+.. ..++.++.+++... + +.. ++||+|++... .. ...++.+++++|||
T Consensus 90 ~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v~~~~~---~~~~~~~l~~~~~~L~p 166 (225)
T 3tr6_A 90 GTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLIYIDAD---KANTDLYYEESLKLLRE 166 (225)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEEEEECSC---GGGHHHHHHHHHHHEEE
T ss_pred CEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccEEEECCC---HHHHHHHHHHHHHhcCC
Confidence 34556677889999998876544 34599999988543 2 221 78999996543 22 46789999999999
Q ss_pred CcEEEEEecC
Q 022411 88 GGTILIYKKL 97 (297)
Q Consensus 88 GG~l~i~~~~ 97 (297)
||+|++.+..
T Consensus 167 gG~lv~~~~~ 176 (225)
T 3tr6_A 167 GGLIAVDNVL 176 (225)
T ss_dssp EEEEEEECSS
T ss_pred CcEEEEeCCC
Confidence 9999987654
No 202
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=96.92 E-value=0.00014 Score=64.22 Aligned_cols=118 Identities=13% Similarity=0.140 Sum_probs=69.1
Q ss_pred CceEEEeecCCc--------------cChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCC---CCC---CCcccEEE
Q 022411 7 QSAVLALSEDKI--------------LPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQL---PVE---SFSIDTVL 64 (297)
Q Consensus 7 ~~~VLll~~~~~--------------vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~L---p~~---d~sfD~Vl 64 (297)
+.+||-|-.|+. ++..|+++.|++.|++++... ..++.++.+|+... +++ +++||+|+
T Consensus 66 ~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i~ 145 (254)
T 2h00_A 66 LRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFCM 145 (254)
T ss_dssp CCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEEE
T ss_pred CCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEEE
Confidence 457777765543 233466789999999877554 23599999997652 455 36899999
Q ss_pred eccccCCCC----------------hHHHHHHHHhcccCCcEEEEEecC---------C-CC----ccchHHHHHHHHHH
Q 022411 65 SISSSHELP----------------GDQLLEEISRVLKPGGTILIYKKL---------T-SD----KGDVDKAISALEGK 114 (297)
Q Consensus 65 s~~~~~~~~----------------~~~~L~ei~RvLKPGG~l~i~~~~---------~-~~----~g~~~~~~~~l~~~ 114 (297)
++..+++.. ...++.+++|+|||||.+.+.... . +. .+. ......+...
T Consensus 146 ~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~~~~~~l~~~g~~~~~~~~-~~~~~~~~~~ 224 (254)
T 2h00_A 146 CNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLGK-KCSLAPLKEE 224 (254)
T ss_dssp ECCCCC-------------------------CTTTTHHHHTHHHHHHHHHHHHHHHGGGBSCEEEEESS-TTSHHHHHHH
T ss_pred ECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHHHHHhcccceEEEEECCCC-hhHHHHHHHH
Confidence 986544321 124567788888888877544210 0 00 000 0112356667
Q ss_pred HHHCCcccccc
Q 022411 115 LLLAGFLDAQR 125 (297)
Q Consensus 115 L~laGFv~v~~ 125 (297)
+..+||.+++.
T Consensus 225 l~~~Gf~~v~~ 235 (254)
T 2h00_A 225 LRIQGVPKVTY 235 (254)
T ss_dssp HHHTTCSEEEE
T ss_pred HHHcCCCceEE
Confidence 88889987654
No 203
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=96.87 E-value=0.00034 Score=60.17 Aligned_cols=79 Identities=10% Similarity=0.129 Sum_probs=57.3
Q ss_pred CccChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCC-C-CC---CCcccEEEeccccCCCChHHHHHHHHhcccCCc
Q 022411 17 KILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQL-P-VE---SFSIDTVLSISSSHELPGDQLLEEISRVLKPGG 89 (297)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~L-p-~~---d~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG 89 (297)
..++..|+.+.|++.|+++.... ..++.++.+++... + ++ ..+||+|++.....+ ...++.++.++|||||
T Consensus 84 ~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v~~d~~~~~--~~~~l~~~~~~L~pgG 161 (223)
T 3duw_A 84 GRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFIFIDADKQN--NPAYFEWALKLSRPGT 161 (223)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEEEECSCGGG--HHHHHHHHHHTCCTTC
T ss_pred CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEEEEcCCcHH--HHHHHHHHHHhcCCCc
Confidence 34556678889999998876543 34699999988643 2 21 167999998654221 3578999999999999
Q ss_pred EEEEEecC
Q 022411 90 TILIYKKL 97 (297)
Q Consensus 90 ~l~i~~~~ 97 (297)
.+++.+..
T Consensus 162 ~lv~~~~~ 169 (223)
T 3duw_A 162 VIIGDNVV 169 (223)
T ss_dssp EEEEESCS
T ss_pred EEEEeCCC
Confidence 99887654
No 204
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=96.85 E-value=0.00043 Score=62.42 Aligned_cols=80 Identities=9% Similarity=0.059 Sum_probs=59.5
Q ss_pred ccChHHHHHHHHHHHHHHhhhc-CCCeEEEEccCCCCCC----CCCcccEEEeccccCC------------------CC-
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPV----ESFSIDTVLSISSSHE------------------LP- 73 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~-~~~v~~~~~d~~~Lp~----~d~sfD~Vls~~~~~~------------------~~- 73 (297)
.++..|+++.+++.++++++.. ..++.++.+|+..++. ..++||+|++...... ..
T Consensus 110 ~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~ 189 (274)
T 3ajd_A 110 TIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLR 189 (274)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEEEEECCC------------HHHHTGGGTC
T ss_pred EEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHH
Confidence 4455677788889888877654 3489999999987765 2678999998732211 02
Q ss_pred hHHHHHHHHhcccCCcEEEEEecC
Q 022411 74 GDQLLEEISRVLKPGGTILIYKKL 97 (297)
Q Consensus 74 ~~~~L~ei~RvLKPGG~l~i~~~~ 97 (297)
...++.+++++|||||+|++....
T Consensus 190 ~~~~l~~~~~~LkpgG~lv~stcs 213 (274)
T 3ajd_A 190 QKELIDIGIDLLKKDGELVYSTCS 213 (274)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEESC
T ss_pred HHHHHHHHHHhCCCCCEEEEEECC
Confidence 367899999999999999987654
No 205
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=96.84 E-value=0.00037 Score=64.33 Aligned_cols=101 Identities=12% Similarity=0.043 Sum_probs=62.2
Q ss_pred ccChHHHHHHHHHHHHHHhhhcCCCeEEE-EccCCCCC---CCCCcccEEEeccccCCCChHHHHHHHHhcccCCcEEEE
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQCDPQIITQ-ASSLSQLP---VESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILI 93 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~~~v~~~-~~d~~~Lp---~~d~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i 93 (297)
.|+..|+++.|++++.++ ++++... ..++..++ ++..+||+|++..+++++ ..+|.+++|+|||||+|++
T Consensus 110 ~V~aVDvs~~mL~~a~r~----~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~sl--~~vL~e~~rvLkpGG~lv~ 183 (291)
T 3hp7_A 110 LVYAVDVGTNQLVWKLRQ----DDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFISL--NLILPALAKILVDGGQVVA 183 (291)
T ss_dssp EEEEECSSSSCSCHHHHT----CTTEEEECSCCGGGCCGGGCTTCCCSEEEECCSSSCG--GGTHHHHHHHSCTTCEEEE
T ss_pred EEEEEECCHHHHHHHHHh----CcccceecccCceecchhhCCCCCCCEEEEEeeHhhH--HHHHHHHHHHcCcCCEEEE
Confidence 344557777777775332 2233322 22333332 345579999998777654 5789999999999999988
Q ss_pred Ee---cCCC--C---ccc---hH---HHHHHHHHHHHHCCccccc
Q 022411 94 YK---KLTS--D---KGD---VD---KAISALEGKLLLAGFLDAQ 124 (297)
Q Consensus 94 ~~---~~~~--~---~g~---~~---~~~~~l~~~L~laGFv~v~ 124 (297)
.. +..+ . .|. +. ...+++...+..+||....
T Consensus 184 lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~ 228 (291)
T 3hp7_A 184 LVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKG 228 (291)
T ss_dssp EECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEE
T ss_pred EECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEE
Confidence 72 2111 0 111 11 2345677788999998654
No 206
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=96.83 E-value=0.00074 Score=63.07 Aligned_cols=103 Identities=10% Similarity=0.015 Sum_probs=66.5
Q ss_pred ccChHHHHHHHHHHHHHHhhhcC-C--CeEEEEccCCCCCCC----CCcccEEEecccc----------CCCC-hHHHHH
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQCD-P--QIITQASSLSQLPVE----SFSIDTVLSISSS----------HELP-GDQLLE 79 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~-~--~v~~~~~d~~~Lp~~----d~sfD~Vls~~~~----------~~~~-~~~~L~ 79 (297)
.|+..|+++.|++.|+++++... . ++.++++|+..+... ..+||+|++.... ++.. ...++.
T Consensus 177 ~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~ 256 (332)
T 2igt_A 177 EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLD 256 (332)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHH
Confidence 45566888999999998765432 2 489999998765321 5689999995431 1122 357899
Q ss_pred HHHhcccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCcc
Q 022411 80 EISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFL 121 (297)
Q Consensus 80 ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv 121 (297)
++.++|||||.|++........ ........+...+..+|+.
T Consensus 257 ~~~~~LkpgG~lli~~~~~~~~-~~~~~~~~l~~a~~~~g~~ 297 (332)
T 2igt_A 257 ICREILSPKALGLVLTAYSIRA-SFYSMHELMRETMRGAGGV 297 (332)
T ss_dssp HHHHTBCTTCCEEEEEECCTTS-CHHHHHHHHHHHTTTSCSE
T ss_pred HHHHhcCcCcEEEEEECCCCCC-CHHHHHHHHHHHHHHcCCe
Confidence 9999999999988776543221 1111112333345567775
No 207
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=96.83 E-value=0.0014 Score=61.77 Aligned_cols=96 Identities=14% Similarity=-0.013 Sum_probs=69.7
Q ss_pred ccChHHHHHHHHHHHHHHhhhcC--CCeEEEEccCCCCCCCCCcccEEEeccccCCCC---------hHHHHHHHHhccc
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQCD--PQIITQASSLSQLPVESFSIDTVLSISSSHELP---------GDQLLEEISRVLK 86 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~--~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~---------~~~~L~ei~RvLK 86 (297)
.++..|+++.|++.|++++.... .++.+.++|+..+|+++++||+|+++..+.... ...++.++.|+|
T Consensus 243 ~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l- 321 (373)
T 3tm4_A 243 EIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL- 321 (373)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE-
T ss_pred eEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc-
Confidence 45566888999999998876543 479999999999998889999999986544211 156788889988
Q ss_pred CCcEEEEEecCCCCccchHHHHHHHHHHHHHCCcccccc
Q 022411 87 PGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQR 125 (297)
Q Consensus 87 PGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~~ 125 (297)
+|.+++..... ..+.+.+...||.....
T Consensus 322 -~g~~~~i~~~~----------~~~~~~~~~~G~~~~~~ 349 (373)
T 3tm4_A 322 -EKRGVFITTEK----------KAIEEAIAENGFEIIHH 349 (373)
T ss_dssp -EEEEEEEESCH----------HHHHHHHHHTTEEEEEE
T ss_pred -CCeEEEEECCH----------HHHHHHHHHcCCEEEEE
Confidence 56655554321 14556777889986553
No 208
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=96.82 E-value=0.0025 Score=60.38 Aligned_cols=78 Identities=12% Similarity=0.122 Sum_probs=54.4
Q ss_pred ccCCCCCCCCCcccEEEeccccCCCC--hH--------------------------------HHHHHHHhcccCCcEEEE
Q 022411 48 SSLSQLPVESFSIDTVLSISSSHELP--GD--------------------------------QLLEEISRVLKPGGTILI 93 (297)
Q Consensus 48 ~d~~~Lp~~d~sfD~Vls~~~~~~~~--~~--------------------------------~~L~ei~RvLKPGG~l~i 93 (297)
++...-.|++++||+|+|++++||+. +. .+|+-.++.|+|||++++
T Consensus 128 gSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl 207 (359)
T 1m6e_X 128 GSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVL 207 (359)
T ss_dssp SCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEE
T ss_pred hhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEE
Confidence 45555679999999999999999986 21 127788999999999999
Q ss_pred EecCCCCccc-------hHHHHHHHHHHHHHCCcccccc
Q 022411 94 YKKLTSDKGD-------VDKAISALEGKLLLAGFLDAQR 125 (297)
Q Consensus 94 ~~~~~~~~g~-------~~~~~~~l~~~L~laGFv~v~~ 125 (297)
...+.++... +-..+...-+.+..-|.++.+.
T Consensus 208 ~~~gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek 246 (359)
T 1m6e_X 208 TILGRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEK 246 (359)
T ss_dssp EEEECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCST
T ss_pred EEecCCCCCccccchHHHHHHHHHHHHHHHHccccchhh
Confidence 9876544321 1122233334567778876543
No 209
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=96.81 E-value=0.00096 Score=63.62 Aligned_cols=53 Identities=21% Similarity=0.192 Sum_probs=42.4
Q ss_pred ccCCCCCCCCCcccEEEeccccCCCC--hH-------------------------------------HHHHHHHhcccCC
Q 022411 48 SSLSQLPVESFSIDTVLSISSSHELP--GD-------------------------------------QLLEEISRVLKPG 88 (297)
Q Consensus 48 ~d~~~Lp~~d~sfD~Vls~~~~~~~~--~~-------------------------------------~~L~ei~RvLKPG 88 (297)
++...-.||+++||+|+|++++||+. +. .+|+..+|.|+||
T Consensus 139 gSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra~eL~pG 218 (374)
T 3b5i_A 139 GSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAAEVKRG 218 (374)
T ss_dssp SCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred hhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 34444568899999999999999986 32 2477889999999
Q ss_pred cEEEEEecCCCC
Q 022411 89 GTILIYKKLTSD 100 (297)
Q Consensus 89 G~l~i~~~~~~~ 100 (297)
|++++...+..+
T Consensus 219 G~mvl~~~gr~~ 230 (374)
T 3b5i_A 219 GAMFLVCLGRTS 230 (374)
T ss_dssp EEEEEEEEECCC
T ss_pred CEEEEEEecCCC
Confidence 999999876543
No 210
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=96.81 E-value=0.00049 Score=67.52 Aligned_cols=73 Identities=12% Similarity=0.172 Sum_probs=55.4
Q ss_pred cChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCCCCCCCcccEEEeccccCCC-C--hHHHHHHHHhcccCCcEEEE
Q 022411 19 LPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSHEL-P--GDQLLEEISRVLKPGGTILI 93 (297)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~-~--~~~~L~ei~RvLKPGG~l~i 93 (297)
|+..|+++ |++.|++++... ..++.++.+++..++++ +.||+|++....+++ . ....+.++.|+|||||++++
T Consensus 184 V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~-~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 184 IYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp EEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred EEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccC-CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 44557777 888888776543 35799999999988776 589999998654433 2 34567788999999999985
No 211
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=96.80 E-value=0.00042 Score=61.66 Aligned_cols=78 Identities=13% Similarity=0.092 Sum_probs=57.5
Q ss_pred CccChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCC-C-C-----CCCcccEEEeccccCCCChHHHHHHHHhcccC
Q 022411 17 KILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQL-P-V-----ESFSIDTVLSISSSHELPGDQLLEEISRVLKP 87 (297)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~L-p-~-----~d~sfD~Vls~~~~~~~~~~~~L~ei~RvLKP 87 (297)
..++..|+++.|++.|+++.+.. ..++.++.+++..+ + + ++++||+|++..... ....++.+++++|||
T Consensus 105 ~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~V~~d~~~~--~~~~~l~~~~~~Lkp 182 (247)
T 1sui_A 105 GKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYDFIFVDADKD--NYLNYHKRLIDLVKV 182 (247)
T ss_dssp CEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBSEEEECSCST--THHHHHHHHHHHBCT
T ss_pred CEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEEEEEEcCchH--HHHHHHHHHHHhCCC
Confidence 34455567788999998876554 34799999988643 3 2 267899999865321 246789999999999
Q ss_pred CcEEEEEec
Q 022411 88 GGTILIYKK 96 (297)
Q Consensus 88 GG~l~i~~~ 96 (297)
||.|++.+.
T Consensus 183 GG~lv~d~~ 191 (247)
T 1sui_A 183 GGVIGYDNT 191 (247)
T ss_dssp TCCEEEECT
T ss_pred CeEEEEecC
Confidence 999998763
No 212
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=96.79 E-value=0.00088 Score=64.14 Aligned_cols=76 Identities=18% Similarity=0.145 Sum_probs=50.5
Q ss_pred cCCCCCCCCCcccEEEeccccCCCC--hHH-----------------------H---------------HHHHHhcccCC
Q 022411 49 SLSQLPVESFSIDTVLSISSSHELP--GDQ-----------------------L---------------LEEISRVLKPG 88 (297)
Q Consensus 49 d~~~Lp~~d~sfD~Vls~~~~~~~~--~~~-----------------------~---------------L~ei~RvLKPG 88 (297)
+...-.|++++||+|+|++++||+. +.. + |+-.+|.|+||
T Consensus 139 SFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra~eL~pG 218 (384)
T 2efj_A 139 SFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHSEELISR 218 (384)
T ss_dssp CTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred hhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 4444578999999999999999986 211 2 44448999999
Q ss_pred cEEEEEecCCCCc--cchH-HHHHHHHHHHHHCCccccc
Q 022411 89 GTILIYKKLTSDK--GDVD-KAISALEGKLLLAGFLDAQ 124 (297)
Q Consensus 89 G~l~i~~~~~~~~--g~~~-~~~~~l~~~L~laGFv~v~ 124 (297)
|++++...+.++. .... .......+.+..-|.++.+
T Consensus 219 G~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~e 257 (384)
T 2efj_A 219 GRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEE 257 (384)
T ss_dssp EEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHH
T ss_pred CeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchh
Confidence 9999998876554 2110 0222333455556766544
No 213
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=96.70 E-value=0.0018 Score=54.18 Aligned_cols=58 Identities=19% Similarity=0.159 Sum_probs=42.9
Q ss_pred CCeEEE-EccCCCCC--------CCCCcccEEEeccccCC----CC-h-------HHHHHHHHhcccCCcEEEEEecCC
Q 022411 41 PQIITQ-ASSLSQLP--------VESFSIDTVLSISSSHE----LP-G-------DQLLEEISRVLKPGGTILIYKKLT 98 (297)
Q Consensus 41 ~~v~~~-~~d~~~Lp--------~~d~sfD~Vls~~~~~~----~~-~-------~~~L~ei~RvLKPGG~l~i~~~~~ 98 (297)
.++.++ .+++...+ +++++||+|++....++ .. . ..++.+++|+|||||+|++..+..
T Consensus 70 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 148 (196)
T 2nyu_A 70 EGATFLCPADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAG 148 (196)
T ss_dssp TTCEEECSCCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred CCCeEEEeccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 457888 88876653 34678999999664432 12 1 378999999999999999987653
No 214
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=96.65 E-value=0.0026 Score=59.07 Aligned_cols=98 Identities=13% Similarity=0.066 Sum_probs=66.8
Q ss_pred hHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEeccccCCCC-h------------------HHHHHHH
Q 022411 21 VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP-G------------------DQLLEEI 81 (297)
Q Consensus 21 ~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~-~------------------~~~L~ei 81 (297)
..|+.+.+.+.|+.++.....++.+..+|.... .....||+|+++..+++++ . ..++.++
T Consensus 164 GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~-~~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~ 242 (344)
T 2f8l_A 164 GVDVDDLLISLALVGADLQRQKMTLLHQDGLAN-LLVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQG 242 (344)
T ss_dssp EEESCHHHHHHHHHHHHHHTCCCEEEESCTTSC-CCCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHH
T ss_pred EEECCHHHHHHHHHHHHhCCCCceEEECCCCCc-cccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHH
Confidence 445567788888876654444688889887653 3467899999997765543 1 1579999
Q ss_pred HhcccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCccc
Q 022411 82 SRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLD 122 (297)
Q Consensus 82 ~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~ 122 (297)
.+.|||||++++..+..--.+. ....+++.+...|++.
T Consensus 243 ~~~Lk~gG~~~~v~p~~~~~~~---~~~~ir~~l~~~~~~~ 280 (344)
T 2f8l_A 243 MRYTKPGGYLFFLVPDAMFGTS---DFAKVDKFIKKNGHIE 280 (344)
T ss_dssp HHTEEEEEEEEEEEEGGGGGST---THHHHHHHHHHHEEEE
T ss_pred HHHhCCCCEEEEEECchhcCCc---hHHHHHHHHHhCCeEE
Confidence 9999999999888754210011 1236677777778764
No 215
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=96.65 E-value=0.00072 Score=59.21 Aligned_cols=78 Identities=12% Similarity=0.072 Sum_probs=56.4
Q ss_pred ccChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCC----CCCCC--CcccEEEeccccCCCChHHHHHHHHhcccCCc
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQ----LPVES--FSIDTVLSISSSHELPGDQLLEEISRVLKPGG 89 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~----Lp~~d--~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG 89 (297)
.++..|+++.+++.|+++.+.. ..++.++.+++.. ++..+ ++||+|++..... ....++.++.++|+|||
T Consensus 99 ~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V~~d~~~~--~~~~~l~~~~~~LkpgG 176 (232)
T 3cbg_A 99 QIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDLIFIDADKR--NYPRYYEIGLNLLRRGG 176 (232)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEEEEECSCGG--GHHHHHHHHHHTEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEEEECCCHH--HHHHHHHHHHHHcCCCe
Confidence 3445677788999988776443 2469999998643 33334 7899999865321 14678999999999999
Q ss_pred EEEEEecC
Q 022411 90 TILIYKKL 97 (297)
Q Consensus 90 ~l~i~~~~ 97 (297)
.|++.+..
T Consensus 177 ~lv~~~~~ 184 (232)
T 3cbg_A 177 LMVIDNVL 184 (232)
T ss_dssp EEEEECTT
T ss_pred EEEEeCCC
Confidence 99987654
No 216
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=96.65 E-value=0.00063 Score=61.74 Aligned_cols=89 Identities=8% Similarity=0.083 Sum_probs=63.3
Q ss_pred cCceEEEeecCC-------------ccChHHHHHHHHHHHHHHhh----h-------cCCCeEEEEccCCCC-CCCCCcc
Q 022411 6 MQSAVLALSEDK-------------ILPVSAVLNAIRDLGDEAVE----Q-------CDPQIITQASSLSQL-PVESFSI 60 (297)
Q Consensus 6 ~~~~VLll~~~~-------------~vt~~dlse~m~~~A~~~~~----~-------~~~~v~~~~~d~~~L-p~~d~sf 60 (297)
++.+||.|--|+ .++..|+.+.|++.|+++.. . ..+++.++.+|+... +. +++|
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~f 153 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRGF 153 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCCE
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cCCe
Confidence 345777775543 34455777889999987651 1 246799999987642 33 6789
Q ss_pred cEEEeccccCCCC-----hHHHHHHHHhcccCCcEEEEEe
Q 022411 61 DTVLSISSSHELP-----GDQLLEEISRVLKPGGTILIYK 95 (297)
Q Consensus 61 D~Vls~~~~~~~~-----~~~~L~ei~RvLKPGG~l~i~~ 95 (297)
|+|++....++.+ ...+++++.++|+|||.+++..
T Consensus 154 D~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 154 DVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp EEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 9999876543221 2678999999999999999874
No 217
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=96.61 E-value=0.0008 Score=60.73 Aligned_cols=84 Identities=14% Similarity=0.107 Sum_probs=61.6
Q ss_pred cCceEEEeecCC------------ccChHHHHHHHHHHHHHHhhh-----cCCCeEEEEccCCCCCCCCCcccEEEeccc
Q 022411 6 MQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQ-----CDPQIITQASSLSQLPVESFSIDTVLSISS 68 (297)
Q Consensus 6 ~~~~VLll~~~~------------~vt~~dlse~m~~~A~~~~~~-----~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~ 68 (297)
++.+||.+-.|+ .++..|+.+.|++.|+++... ..+++.++.+|+.... ++||+|++...
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d~~ 148 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCLQE 148 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEESSC
T ss_pred CCCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEECCC
Confidence 345677776553 344556778899988765422 2568999999988764 78999998742
Q ss_pred cCCCChHHHHHHHHhcccCCcEEEEEec
Q 022411 69 SHELPGDQLLEEISRVLKPGGTILIYKK 96 (297)
Q Consensus 69 ~~~~~~~~~L~ei~RvLKPGG~l~i~~~ 96 (297)
.+..+++++.|+|||||.|++...
T Consensus 149 ----dp~~~~~~~~~~L~pgG~lv~~~~ 172 (262)
T 2cmg_A 149 ----PDIHRIDGLKRMLKEDGVFISVAK 172 (262)
T ss_dssp ----CCHHHHHHHHTTEEEEEEEEEEEE
T ss_pred ----ChHHHHHHHHHhcCCCcEEEEEcC
Confidence 234589999999999999998743
No 218
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=96.60 E-value=9.5e-05 Score=65.71 Aligned_cols=77 Identities=9% Similarity=0.041 Sum_probs=55.3
Q ss_pred cChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCC-CCC-----CCcccEEEeccccCCCChHHHHHHHHhcccCCcE
Q 022411 19 LPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQL-PVE-----SFSIDTVLSISSSHELPGDQLLEEISRVLKPGGT 90 (297)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~L-p~~-----d~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~ 90 (297)
++..|+++.|++.|+++.+.. ..++.++.+++..+ +.. +++||+|++..... ....++.+++++|||||.
T Consensus 88 v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V~~d~~~~--~~~~~l~~~~~~LkpGG~ 165 (242)
T 3r3h_A 88 VITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFIFIDADKT--NYLNYYELALKLVTPKGL 165 (242)
T ss_dssp EEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEEEEESCGG--GHHHHHHHHHHHEEEEEE
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEEEEcCChH--HhHHHHHHHHHhcCCCeE
Confidence 334455667777777766543 35799999998654 321 57899999875311 145789999999999999
Q ss_pred EEEEecC
Q 022411 91 ILIYKKL 97 (297)
Q Consensus 91 l~i~~~~ 97 (297)
|++.+..
T Consensus 166 lv~d~~~ 172 (242)
T 3r3h_A 166 IAIDNIF 172 (242)
T ss_dssp EEEECSS
T ss_pred EEEECCc
Confidence 9997654
No 219
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=96.53 E-value=0.0022 Score=61.08 Aligned_cols=85 Identities=16% Similarity=0.160 Sum_probs=59.7
Q ss_pred cCceEEEeecCCc-------------cChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCCCCCCCcccEEEeccc--
Q 022411 6 MQSAVLALSEDKI-------------LPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISS-- 68 (297)
Q Consensus 6 ~~~~VLll~~~~~-------------vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~-- 68 (297)
.|.+||-|--|+. |...+.+ .|.+.|++.++.. ..+|.++.++++.+.++ ..||+|++-..
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s-~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~~ 160 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAGARRVYAVEAS-AIWQQAREVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWMGY 160 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECS-TTHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCBT
T ss_pred CCCEEEEeCCCccHHHHHHHHhCCCEEEEEeCh-HHHHHHHHHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeecccc
Confidence 3667888866553 2222333 3677777655432 45799999999998877 67999998542
Q ss_pred -cCCCC-hHHHHHHHHhcccCCcEEE
Q 022411 69 -SHELP-GDQLLEEISRVLKPGGTIL 92 (297)
Q Consensus 69 -~~~~~-~~~~L~ei~RvLKPGG~l~ 92 (297)
+.+-. ...++....|.|||||.++
T Consensus 161 ~l~~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 161 GLLHESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp TBTTTCSHHHHHHHHHHHEEEEEEEE
T ss_pred cccccchhhhHHHHHHhhCCCCceEC
Confidence 33332 5788888999999999986
No 220
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=96.52 E-value=0.00014 Score=64.49 Aligned_cols=100 Identities=16% Similarity=0.098 Sum_probs=57.7
Q ss_pred ccChHHHHHHHHHHHHHHhhhc----CCCeEEEE-ccCCCCCCCCCcccEEEeccccCCCChHHHHHHHHhcccCCcEEE
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQC----DPQIITQA-SSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTIL 92 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~----~~~v~~~~-~d~~~Lp~~d~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~ 92 (297)
.|+..|+++.|++.|+++.... ..++.+.. .++...+++..+||++++.. ..++.+++|+|||||+|+
T Consensus 62 ~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v~~~l-------~~~l~~i~rvLkpgG~lv 134 (232)
T 3opn_A 62 LVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDVSFISL-------DLILPPLYEILEKNGEVA 134 (232)
T ss_dssp EEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECCSSSCG-------GGTHHHHHHHSCTTCEEE
T ss_pred EEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCCCCEEEEEEEhhhH-------HHHHHHHHHhccCCCEEE
Confidence 4455677777888776543221 12333333 33332223445666665442 578999999999999998
Q ss_pred EEecC---CCC-----cc---chH---HHHHHHHHHHHHCCccccc
Q 022411 93 IYKKL---TSD-----KG---DVD---KAISALEGKLLLAGFLDAQ 124 (297)
Q Consensus 93 i~~~~---~~~-----~g---~~~---~~~~~l~~~L~laGFv~v~ 124 (297)
+.... ... .+ ... ...+++...+..+||....
T Consensus 135 ~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~ 180 (232)
T 3opn_A 135 ALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKG 180 (232)
T ss_dssp EEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEE
T ss_pred EEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEE
Confidence 86311 100 00 011 2345777888999998654
No 221
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=96.51 E-value=0.0032 Score=57.26 Aligned_cols=76 Identities=14% Similarity=0.181 Sum_probs=55.8
Q ss_pred ccChHHHHHHHHHHHHHHhhhcC--CCeEEEEccCCCCCCCCCcc---cEEEeccccC-----------CCCh-------
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQCD--PQIITQASSLSQLPVESFSI---DTVLSISSSH-----------ELPG------- 74 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~--~~v~~~~~d~~~Lp~~d~sf---D~Vls~~~~~-----------~~~~------- 74 (297)
.++..|+++.+++.|++++.... .++.++++|+.. +++ ++| |+|+++..+. |.+.
T Consensus 148 ~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~-~~~-~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~ 225 (284)
T 1nv8_A 148 IVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLE-PFK-EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGE 225 (284)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTG-GGG-GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTT
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchh-hcc-cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCC
Confidence 44566888999999998876542 259999999976 233 579 9999984221 2221
Q ss_pred --HHHHHHHH-hcccCCcEEEEEe
Q 022411 75 --DQLLEEIS-RVLKPGGTILIYK 95 (297)
Q Consensus 75 --~~~L~ei~-RvLKPGG~l~i~~ 95 (297)
..+++++. +.|+|||.|++..
T Consensus 226 dgl~~~~~i~~~~l~pgG~l~~e~ 249 (284)
T 1nv8_A 226 DGLDFYREFFGRYDTSGKIVLMEI 249 (284)
T ss_dssp TSCHHHHHHHHHCCCTTCEEEEEC
T ss_pred cHHHHHHHHHHhcCCCCCEEEEEE
Confidence 26899999 9999999999753
No 222
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=96.48 E-value=0.0031 Score=61.84 Aligned_cols=80 Identities=11% Similarity=0.156 Sum_probs=58.5
Q ss_pred ccChHHHHHHHHHHHHHHhhhc-CCCeEEEEccCCCCCC-CCCcccEEEeccc------cCC-------CC---------
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPV-ESFSIDTVLSISS------SHE-------LP--------- 73 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~-~~~v~~~~~d~~~Lp~-~d~sfD~Vls~~~------~~~-------~~--------- 73 (297)
.|+..|+++.|++.++++++.. ..++.++.+|+..++. .+++||+|++... ++. +.
T Consensus 144 ~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~ 223 (479)
T 2frx_A 144 AILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAA 223 (479)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHH
Confidence 3445577889999998887654 3479999999988764 5678999998321 111 11
Q ss_pred -hHHHHHHHHhcccCCcEEEEEecC
Q 022411 74 -GDQLLEEISRVLKPGGTILIYKKL 97 (297)
Q Consensus 74 -~~~~L~ei~RvLKPGG~l~i~~~~ 97 (297)
...+|.+++++|||||+|++.+-.
T Consensus 224 ~q~~iL~~a~~~LkpGG~LvysTcs 248 (479)
T 2frx_A 224 TQRELIDSAFHALRPGGTLVYSTCT 248 (479)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred HHHHHHHHHHHhcCCCCEEEEeccc
Confidence 136789999999999999987654
No 223
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=96.40 E-value=0.00078 Score=58.05 Aligned_cols=78 Identities=15% Similarity=0.191 Sum_probs=56.0
Q ss_pred ccChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCC--CCCC----CcccEEEeccccCCCChHHHHHHHHhcccCCc
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQL--PVES----FSIDTVLSISSSHELPGDQLLEEISRVLKPGG 89 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~L--p~~d----~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG 89 (297)
.++..|+++.|++.|+++.+.. ..++.++.+++... .+.+ ++||+|++..... ....++.++.++|+|||
T Consensus 96 ~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~v~~d~~~~--~~~~~l~~~~~~L~pgG 173 (229)
T 2avd_A 96 RVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVAVVDADKE--NCSAYYERCLQLLRPGG 173 (229)
T ss_dssp EEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEEEEECSCST--THHHHHHHHHHHEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccEEEECCCHH--HHHHHHHHHHHHcCCCe
Confidence 3445566788888888876543 35799999987543 1222 7899999865311 24678999999999999
Q ss_pred EEEEEecC
Q 022411 90 TILIYKKL 97 (297)
Q Consensus 90 ~l~i~~~~ 97 (297)
.+++.+..
T Consensus 174 ~lv~~~~~ 181 (229)
T 2avd_A 174 ILAVLRVL 181 (229)
T ss_dssp EEEEECCS
T ss_pred EEEEECCC
Confidence 99987643
No 224
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=96.38 E-value=0.0081 Score=53.46 Aligned_cols=114 Identities=14% Similarity=0.012 Sum_probs=80.0
Q ss_pred ccccCceEEEeecCCc--------------cChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCCCCCCCcccEEEec
Q 022411 3 TGKMQSAVLALSEDKI--------------LPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSI 66 (297)
Q Consensus 3 ~~~~~~~VLll~~~~~--------------vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~Lp~~d~sfD~Vls~ 66 (297)
.++.|.+||-+-.|+. |..-|+.+.+++.|+++++.. ..++.++.+|+.....++..||+|+..
T Consensus 18 ~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~Ivia 97 (230)
T 3lec_A 18 YVPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITIC 97 (230)
T ss_dssp TSCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEE
T ss_pred hCCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEe
Confidence 4556667777644332 234588889999999887654 346999999998776555589998753
Q ss_pred cccCCCChHHHHHHHHhcccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCcccccch
Q 022411 67 SSSHELPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQRI 126 (297)
Q Consensus 67 ~~~~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~~~ 126 (297)
-..-. ....++.+..+.|+++|+|++..... ...+++.|..+||.-++..
T Consensus 98 GmGg~-lI~~IL~~~~~~l~~~~~lIlqp~~~---------~~~lr~~L~~~Gf~i~~E~ 147 (230)
T 3lec_A 98 GMGGR-LIADILNNDIDKLQHVKTLVLQPNNR---------EDDLRKWLAANDFEIVAED 147 (230)
T ss_dssp EECHH-HHHHHHHHTGGGGTTCCEEEEEESSC---------HHHHHHHHHHTTEEEEEEE
T ss_pred CCchH-HHHHHHHHHHHHhCcCCEEEEECCCC---------hHHHHHHHHHCCCEEEEEE
Confidence 21110 12467888899999999999876432 2367888999999977654
No 225
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=96.38 E-value=0.0015 Score=62.74 Aligned_cols=79 Identities=13% Similarity=0.099 Sum_probs=57.0
Q ss_pred cChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCC--CCCCcccEEEeccc------cCCCCh----------------
Q 022411 19 LPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLP--VESFSIDTVLSISS------SHELPG---------------- 74 (297)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp--~~d~sfD~Vls~~~------~~~~~~---------------- 74 (297)
++..|+++.+++.+++++.....++.++.+|+..++ +++++||+|++... ++..+.
T Consensus 273 v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~ 352 (429)
T 1sqg_A 273 VVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQL 352 (429)
T ss_dssp EEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHH
T ss_pred EEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHH
Confidence 334455667788888776655556889999998876 66789999997421 122221
Q ss_pred -HHHHHHHHhcccCCcEEEEEecC
Q 022411 75 -DQLLEEISRVLKPGGTILIYKKL 97 (297)
Q Consensus 75 -~~~L~ei~RvLKPGG~l~i~~~~ 97 (297)
..++.++++.|||||+|++.+-.
T Consensus 353 q~~~L~~a~~~LkpGG~lvystcs 376 (429)
T 1sqg_A 353 QSEILDAIWPHLKTGGTLVYATCS 376 (429)
T ss_dssp HHHHHHHHGGGEEEEEEEEEEESC
T ss_pred HHHHHHHHHHhcCCCCEEEEEECC
Confidence 37899999999999999988743
No 226
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=96.36 E-value=0.007 Score=54.62 Aligned_cols=53 Identities=13% Similarity=0.184 Sum_probs=42.1
Q ss_pred CeEEE--EccCCCCCCCCCcccEEEeccccCCCC-h----H---HHHHHHHhcccCCc--EEEEEecC
Q 022411 42 QIITQ--ASSLSQLPVESFSIDTVLSISSSHELP-G----D---QLLEEISRVLKPGG--TILIYKKL 97 (297)
Q Consensus 42 ~v~~~--~~d~~~Lp~~d~sfD~Vls~~~~~~~~-~----~---~~L~ei~RvLKPGG--~l~i~~~~ 97 (297)
++.++ ++|+..+| +++||+|++... ++.. . . .+|.++.|+||||| .|++..+.
T Consensus 123 ~v~~~~~~~D~~~l~--~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 123 NIVKFKSRVDIHTLP--VERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp GGEEEECSCCTTTSC--CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred CeEEEecccCHhHCC--CCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 68888 88998876 789999999876 3322 1 1 37899999999999 99987765
No 227
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=96.33 E-value=0.0066 Score=55.15 Aligned_cols=53 Identities=25% Similarity=0.274 Sum_probs=42.2
Q ss_pred CeEEE--EccCCCCCCCCCcccEEEeccccCCCC-h----H---HHHHHHHhcccCCc--EEEEEecC
Q 022411 42 QIITQ--ASSLSQLPVESFSIDTVLSISSSHELP-G----D---QLLEEISRVLKPGG--TILIYKKL 97 (297)
Q Consensus 42 ~v~~~--~~d~~~Lp~~d~sfD~Vls~~~~~~~~-~----~---~~L~ei~RvLKPGG--~l~i~~~~ 97 (297)
++.++ ++|+..+| +++||+|++... ++.. . . .+|.++.|+||||| .|++..+.
T Consensus 131 ~v~~~~~~~D~~~l~--~~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 131 NLITFKSKVDVTKME--PFQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp GGEEEECSCCGGGCC--CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred CeEEEeccCcHhhCC--CCCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 68889 89998876 789999999876 3322 1 1 37899999999999 99987765
No 228
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=96.33 E-value=0.00047 Score=68.82 Aligned_cols=83 Identities=10% Similarity=0.033 Sum_probs=67.6
Q ss_pred cCCccChHHHHHHHHHHHHHHhhhc-CCCeEEEEccCCCC--CCCCCcccEEEeccccCCCC-h--HHHHHHHHhcccCC
Q 022411 15 EDKILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQL--PVESFSIDTVLSISSSHELP-G--DQLLEEISRVLKPG 88 (297)
Q Consensus 15 ~~~~vt~~dlse~m~~~A~~~~~~~-~~~v~~~~~d~~~L--p~~d~sfD~Vls~~~~~~~~-~--~~~L~ei~RvLKPG 88 (297)
.|+.|+..|+++.+++.|+..+.+. ..+|.|++++++.+ ++.+++||+|++.-.++|++ + -..+..+++.|+++
T Consensus 87 ~ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~ehv~~~~~~~~~~~~~~tl~~~ 166 (569)
T 4azs_A 87 KGATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSVFHHIVHLHGIDEVKRLLSRLADV 166 (569)
T ss_dssp TTCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESCHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcchhcCCCHHHHHHHHHHHHHhccc
Confidence 3777888899999999999876554 36899999999988 56788999999999999987 3 23456788889999
Q ss_pred cEEEEEecC
Q 022411 89 GTILIYKKL 97 (297)
Q Consensus 89 G~l~i~~~~ 97 (297)
|+.++....
T Consensus 167 ~~~~~~~~~ 175 (569)
T 4azs_A 167 TQAVILELA 175 (569)
T ss_dssp SSEEEEECC
T ss_pred cceeeEEec
Confidence 998877654
No 229
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=96.31 E-value=0.016 Score=48.90 Aligned_cols=92 Identities=11% Similarity=0.002 Sum_probs=64.7
Q ss_pred cChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEeccccCCCC---hHHHHHHHHhcccCCcEEEEEe
Q 022411 19 LPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP---GDQLLEEISRVLKPGGTILIYK 95 (297)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~---~~~~L~ei~RvLKPGG~l~i~~ 95 (297)
++..|+++.|++.++++......++.++.+|+..+| .+||+|+++..+++.. ...++.++.++| ||.+ +..
T Consensus 75 v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l--~~~~-~~~ 148 (207)
T 1wy7_A 75 VICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFN---SRVDIVIMNPPFGSQRKHADRPFLLKAFEIS--DVVY-SIH 148 (207)
T ss_dssp EEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCC---CCCSEEEECCCCSSSSTTTTHHHHHHHHHHC--SEEE-EEE
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcC---CCCCEEEEcCCCccccCCchHHHHHHHHHhc--CcEE-EEE
Confidence 455677889999998876554448999999999875 4899999998877654 367899999999 5544 433
Q ss_pred cCCCCccchHHHHHHHHHHHHHCCccc
Q 022411 96 KLTSDKGDVDKAISALEGKLLLAGFLD 122 (297)
Q Consensus 96 ~~~~~~g~~~~~~~~l~~~L~laGFv~ 122 (297)
... ....+.+.+.+...||.-
T Consensus 149 ~~~------~~~~~~~~~~l~~~g~~~ 169 (207)
T 1wy7_A 149 LAK------PEVRRFIEKFSWEHGFVV 169 (207)
T ss_dssp ECC------HHHHHHHHHHHHHTTEEE
T ss_pred eCC------cCCHHHHHHHHHHCCCeE
Confidence 211 112234556677889864
No 230
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=96.30 E-value=0.0011 Score=57.86 Aligned_cols=76 Identities=17% Similarity=0.197 Sum_probs=54.4
Q ss_pred cChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCC-CC--------------CCC--CcccEEEeccccCCCChHHHHH
Q 022411 19 LPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQ-LP--------------VES--FSIDTVLSISSSHELPGDQLLE 79 (297)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~-Lp--------------~~d--~sfD~Vls~~~~~~~~~~~~L~ 79 (297)
++..|.++.+++.|+++.... ..++.++.+++.. ++ |++ ++||+|++...... ...++.
T Consensus 88 v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~--~~~~l~ 165 (239)
T 2hnk_A 88 ILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADKEN--YPNYYP 165 (239)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCGGG--HHHHHH
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccccccccCCCCCcCEEEEeCCHHH--HHHHHH
Confidence 344566688888888776543 2348999988754 22 222 78999998753222 357899
Q ss_pred HHHhcccCCcEEEEEec
Q 022411 80 EISRVLKPGGTILIYKK 96 (297)
Q Consensus 80 ei~RvLKPGG~l~i~~~ 96 (297)
++.++|||||+|++.+.
T Consensus 166 ~~~~~L~pgG~lv~~~~ 182 (239)
T 2hnk_A 166 LILKLLKPGGLLIADNV 182 (239)
T ss_dssp HHHHHEEEEEEEEEECS
T ss_pred HHHHHcCCCeEEEEEcc
Confidence 99999999999998763
No 231
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=96.28 E-value=0.0012 Score=58.04 Aligned_cols=77 Identities=12% Similarity=0.053 Sum_probs=55.6
Q ss_pred ccChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCC-C-C-----CCCcccEEEeccccCCCChHHHHHHHHhcccCC
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQL-P-V-----ESFSIDTVLSISSSHELPGDQLLEEISRVLKPG 88 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~L-p-~-----~d~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPG 88 (297)
.++..|+.+.+++.|+++.+.. ..++.++.+++..+ + + ++++||+|++..... .....+.++.++||||
T Consensus 97 ~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~I~~d~~~~--~~~~~l~~~~~~L~pG 174 (237)
T 3c3y_A 97 KITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYDFGFVDADKP--NYIKYHERLMKLVKVG 174 (237)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEEEEEECSCGG--GHHHHHHHHHHHEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcCEEEECCchH--HHHHHHHHHHHhcCCC
Confidence 3344466788999998876544 23699999988643 3 2 257899999864211 1467899999999999
Q ss_pred cEEEEEec
Q 022411 89 GTILIYKK 96 (297)
Q Consensus 89 G~l~i~~~ 96 (297)
|.+++.+.
T Consensus 175 G~lv~d~~ 182 (237)
T 3c3y_A 175 GIVAYDNT 182 (237)
T ss_dssp EEEEEECT
T ss_pred eEEEEecC
Confidence 99988764
No 232
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=96.17 E-value=0.0038 Score=52.69 Aligned_cols=66 Identities=6% Similarity=-0.036 Sum_probs=48.9
Q ss_pred cChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEeccccCCCC---hHHHHHHHHhcccCCcEEEE
Q 022411 19 LPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP---GDQLLEEISRVLKPGGTILI 93 (297)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~---~~~~L~ei~RvLKPGG~l~i 93 (297)
++..|+++.|++.|+++.. ++.++.+|+..+| ++||+|+++..+|++. ...+++++.++| |+.+++
T Consensus 77 v~~vD~~~~~~~~a~~~~~----~~~~~~~d~~~~~---~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~--g~~~~~ 145 (200)
T 1ne2_A 77 VTAFDIDPDAIETAKRNCG----GVNFMVADVSEIS---GKYDTWIMNPPFGSVVKHSDRAFIDKAFETS--MWIYSI 145 (200)
T ss_dssp EEEEESCHHHHHHHHHHCT----TSEEEECCGGGCC---CCEEEEEECCCC-------CHHHHHHHHHHE--EEEEEE
T ss_pred EEEEECCHHHHHHHHHhcC----CCEEEECcHHHCC---CCeeEEEECCCchhccCchhHHHHHHHHHhc--CcEEEE
Confidence 4456778889998887654 7899999998875 6899999999888875 357899999999 443333
No 233
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=96.07 E-value=0.0056 Score=58.00 Aligned_cols=101 Identities=12% Similarity=0.038 Sum_probs=66.7
Q ss_pred ccChHHHHHHHHHHHHHHhhhcCC---CeEEEEccCCCCCC----CCCcccEEEeccccC---------CCC-hHHHHHH
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQCDP---QIITQASSLSQLPV----ESFSIDTVLSISSSH---------ELP-GDQLLEE 80 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~~---~v~~~~~d~~~Lp~----~d~sfD~Vls~~~~~---------~~~-~~~~L~e 80 (297)
.|+..|+++.+++.|+++++.... ++.++.+|+..+.. ....||+|++..... ... ...++.+
T Consensus 245 ~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~ 324 (396)
T 3c0k_A 245 QVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINML 324 (396)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHH
Confidence 344567888999999887754432 79999999876521 146899999975321 112 3678899
Q ss_pred HHhcccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCc
Q 022411 81 ISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGF 120 (297)
Q Consensus 81 i~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGF 120 (297)
+.+.|+|||.+++....... ..+.-...+...+..+|+
T Consensus 325 ~~~~LkpgG~l~~~~~~~~~--~~~~~~~~i~~~~~~~g~ 362 (396)
T 3c0k_A 325 AIQLLNEGGILLTFSCSGLM--TSDLFQKIIADAAIDAGR 362 (396)
T ss_dssp HHHTEEEEEEEEEEECCTTC--CHHHHHHHHHHHHHHHTC
T ss_pred HHHhcCCCcEEEEEeCCCcC--CHHHHHHHHHHHHHHcCC
Confidence 99999999999988754321 111112234445666664
No 234
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=96.04 E-value=0.0051 Score=58.22 Aligned_cols=81 Identities=9% Similarity=-0.102 Sum_probs=58.8
Q ss_pred ccChHHHHHHHHHHHHHHhhhcC--CCeEEEEccCCCCCC----CCCcccEEEeccccCCC---------C-hHHHHHHH
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQCD--PQIITQASSLSQLPV----ESFSIDTVLSISSSHEL---------P-GDQLLEEI 81 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~--~~v~~~~~d~~~Lp~----~d~sfD~Vls~~~~~~~---------~-~~~~L~ei 81 (297)
.|+..|+++.+++.|++++.... .++.++.+|+..+.. ...+||+|++....... . ...++.++
T Consensus 242 ~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~ 321 (396)
T 2as0_A 242 EVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAG 321 (396)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 35566788899999988765432 279999999876532 25789999996533211 1 35688999
Q ss_pred HhcccCCcEEEEEecCC
Q 022411 82 SRVLKPGGTILIYKKLT 98 (297)
Q Consensus 82 ~RvLKPGG~l~i~~~~~ 98 (297)
.++|+|||.|++.....
T Consensus 322 ~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 322 LNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp HTTEEEEEEEEEEECCT
T ss_pred HHhcCCCcEEEEEECCC
Confidence 99999999998887543
No 235
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=96.04 E-value=0.0017 Score=63.50 Aligned_cols=80 Identities=20% Similarity=0.138 Sum_probs=58.0
Q ss_pred ccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCC-CCCCcccEEEeccc------cCCCC-----------------
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLP-VESFSIDTVLSISS------SHELP----------------- 73 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp-~~d~sfD~Vls~~~------~~~~~----------------- 73 (297)
.|+..|+++.|++.++++++.....+.++.+|+..++ +.+++||+|++... ++..+
T Consensus 128 ~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~ 207 (464)
T 3m6w_A 128 LLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEV 207 (464)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHH
Confidence 3445578889999999887665333889999988776 34689999996321 11111
Q ss_pred hHHHHHHHHhcccCCcEEEEEecC
Q 022411 74 GDQLLEEISRVLKPGGTILIYKKL 97 (297)
Q Consensus 74 ~~~~L~ei~RvLKPGG~l~i~~~~ 97 (297)
...+|.+++++|||||+|++.+-.
T Consensus 208 Q~~iL~~a~~~LkpGG~LvysTCs 231 (464)
T 3m6w_A 208 QKALLAQASRLLGPGGVLVYSTCT 231 (464)
T ss_dssp HHHHHHHHHTTEEEEEEEEEEESC
T ss_pred HHHHHHHHHHhcCCCcEEEEEecc
Confidence 156899999999999999987643
No 236
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=96.00 E-value=0.0049 Score=60.15 Aligned_cols=100 Identities=11% Similarity=0.074 Sum_probs=65.4
Q ss_pred cChHHHHHHHHHHHHHHhhhc-CCCeEEEEccCCCCC-CCCCcccEEEeccc---cCCC-----------C---------
Q 022411 19 LPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLP-VESFSIDTVLSISS---SHEL-----------P--------- 73 (297)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~-~~~v~~~~~d~~~Lp-~~d~sfD~Vls~~~---~~~~-----------~--------- 73 (297)
|+..|+++.+++.++++++.. ..++.++.+|+..++ +.+++||+|++... ...+ +
T Consensus 133 V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~ 212 (456)
T 3m4x_A 133 LVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKR 212 (456)
T ss_dssp EEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHH
Confidence 345577888899988887654 457899999988765 34679999998542 1111 0
Q ss_pred hHHHHHHHHhcccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCccc
Q 022411 74 GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLD 122 (297)
Q Consensus 74 ~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~ 122 (297)
...+|.++.++|||||+|++.+-.-...++ .. .+...+...||.-
T Consensus 213 Q~~iL~~a~~~LkpGG~LvYsTCs~~~eEn-e~---vv~~~l~~~~~~l 257 (456)
T 3m4x_A 213 QQEILSSAIKMLKNKGQLIYSTCTFAPEEN-EE---IISWLVENYPVTI 257 (456)
T ss_dssp HHHHHHHHHHTEEEEEEEEEEESCCCGGGT-HH---HHHHHHHHSSEEE
T ss_pred HHHHHHHHHHhcCCCcEEEEEEeecccccC-HH---HHHHHHHhCCCEE
Confidence 126799999999999999887643221111 11 3444556667543
No 237
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=95.97 E-value=0.0069 Score=57.14 Aligned_cols=80 Identities=11% Similarity=-0.005 Sum_probs=57.7
Q ss_pred cChHHHHHHHHHHHHHHhhhc-CCCeEEEEccCCCCCC----CCCcccEEEeccccCCC---------C-hHHHHHHHHh
Q 022411 19 LPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPV----ESFSIDTVLSISSSHEL---------P-GDQLLEEISR 83 (297)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~-~~~v~~~~~d~~~Lp~----~d~sfD~Vls~~~~~~~---------~-~~~~L~ei~R 83 (297)
|+..|+++.+++.|+++++.. ..++.++.+|+..+.. ...+||+|++....... . ...++.++.+
T Consensus 234 v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~ 313 (382)
T 1wxx_A 234 VVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIK 313 (382)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECCCCCCCChhHHHHHHHHHHHHHHHHHH
Confidence 345577889999998876543 3459999999876532 15789999986532211 1 2568889999
Q ss_pred cccCCcEEEEEecCC
Q 022411 84 VLKPGGTILIYKKLT 98 (297)
Q Consensus 84 vLKPGG~l~i~~~~~ 98 (297)
+|+|||.|++.....
T Consensus 314 ~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 314 LLKEGGILATASCSH 328 (382)
T ss_dssp TEEEEEEEEEEECCT
T ss_pred hcCCCCEEEEEECCC
Confidence 999999999887653
No 238
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=95.94 E-value=0.0022 Score=58.22 Aligned_cols=85 Identities=14% Similarity=0.108 Sum_probs=58.7
Q ss_pred cCceEEEeecCCc------------cChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCCCCCCCcccEEEeccccCC
Q 022411 6 MQSAVLALSEDKI------------LPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSHE 71 (297)
Q Consensus 6 ~~~~VLll~~~~~------------vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~ 71 (297)
.+.+||-+--|+. ++..|+.+.|++.++++.... ..++.++.+|+..++++ +||+|+++..+++
T Consensus 28 ~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~--~fD~vv~nlpy~~ 105 (285)
T 1zq9_A 28 PTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP--FFDTCVANLPYQI 105 (285)
T ss_dssp TTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC--CCSEEEEECCGGG
T ss_pred CCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch--hhcEEEEecCccc
Confidence 4566776655433 334467788999988776433 25799999999988766 7999999877665
Q ss_pred CCh--HHHH--------------HHH--HhcccCCcEEE
Q 022411 72 LPG--DQLL--------------EEI--SRVLKPGGTIL 92 (297)
Q Consensus 72 ~~~--~~~L--------------~ei--~RvLKPGG~l~ 92 (297)
..+ ..++ +|+ .++|+|||+++
T Consensus 106 ~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 106 SSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp HHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred chHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 431 2222 233 36999999986
No 239
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=95.87 E-value=0.0087 Score=55.11 Aligned_cols=56 Identities=13% Similarity=0.069 Sum_probs=41.8
Q ss_pred CCeEEEEc-cCCCCCCCCCcccEEEeccccC---CCC-hH---HHHHHHHhcccCCcEEEEEecCC
Q 022411 41 PQIITQAS-SLSQLPVESFSIDTVLSISSSH---ELP-GD---QLLEEISRVLKPGGTILIYKKLT 98 (297)
Q Consensus 41 ~~v~~~~~-d~~~Lp~~d~sfD~Vls~~~~~---~~~-~~---~~L~ei~RvLKPGG~l~i~~~~~ 98 (297)
.++.++++ |+..+| ..+||+|++....+ +.. .. .+|.++.|+|||||.|++..+..
T Consensus 131 ~~v~~~~~~D~~~l~--~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 131 NLVRLQSGVDVFFIP--PERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp GGEEEECSCCTTTSC--CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred CCeEEEeccccccCC--cCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 46888888 887765 67999999976543 221 11 47889999999999999876543
No 240
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=95.87 E-value=0.017 Score=51.87 Aligned_cols=114 Identities=12% Similarity=0.043 Sum_probs=78.8
Q ss_pred ccccCceEEEeecCCc--------------cChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCCCCCCCcccEEEec
Q 022411 3 TGKMQSAVLALSEDKI--------------LPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSI 66 (297)
Q Consensus 3 ~~~~~~~VLll~~~~~--------------vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~Lp~~d~sfD~Vls~ 66 (297)
.++.|.+||-+-.|+. |..-|+.+.+++.|+++++.. ..+|.++.+|+.....++..||+|++.
T Consensus 18 ~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Ivia 97 (244)
T 3gnl_A 18 YITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIA 97 (244)
T ss_dssp TCCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEE
T ss_pred hCCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEe
Confidence 4556667777644332 234588889999999887654 346999999988765554569998764
Q ss_pred cccCCCChHHHHHHHHhcccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCcccccch
Q 022411 67 SSSHELPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQRI 126 (297)
Q Consensus 67 ~~~~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~~~ 126 (297)
-..-. ....++.+..+.|+++|+|++.-... ...+++.|..+||.-++..
T Consensus 98 gmGg~-lI~~IL~~~~~~L~~~~~lIlq~~~~---------~~~lr~~L~~~Gf~i~~E~ 147 (244)
T 3gnl_A 98 GMGGT-LIRTILEEGAAKLAGVTKLILQPNIA---------AWQLREWSEQNNWLITSEA 147 (244)
T ss_dssp EECHH-HHHHHHHHTGGGGTTCCEEEEEESSC---------HHHHHHHHHHHTEEEEEEE
T ss_pred CCchH-HHHHHHHHHHHHhCCCCEEEEEcCCC---------hHHHHHHHHHCCCEEEEEE
Confidence 21110 02467888899999999999876431 1267788999999976544
No 241
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=95.83 E-value=0.0035 Score=59.47 Aligned_cols=102 Identities=12% Similarity=0.061 Sum_probs=66.1
Q ss_pred ccChHHHHHHHHHHHHHHhhhcC--C-CeEEEEccCCC-CCC---CCCcccEEEecccc-----CCCC-h----HHHHHH
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQCD--P-QIITQASSLSQ-LPV---ESFSIDTVLSISSS-----HELP-G----DQLLEE 80 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~--~-~v~~~~~d~~~-Lp~---~d~sfD~Vls~~~~-----~~~~-~----~~~L~e 80 (297)
.|+..|+++.|++.|+++++... . ++.++.+|+.. ++. ...+||+|++.... .... . ..++.+
T Consensus 237 ~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~ 316 (385)
T 2b78_A 237 ATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQ 316 (385)
T ss_dssp EEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEEECCCCCCCChhhHHHHHHHHHHHHHH
Confidence 34566788899999998875432 2 79999999865 331 24589999986543 1222 2 346778
Q ss_pred HHhcccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCcc
Q 022411 81 ISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFL 121 (297)
Q Consensus 81 i~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv 121 (297)
+.++|+|||.|++....... ..+.-...+...+..+|+.
T Consensus 317 ~~~~L~pgG~l~~~~~~~~~--~~~~~~~~i~~~~~~~g~~ 355 (385)
T 2b78_A 317 GLEILSENGLIIASTNAANM--TVSQFKKQIEKGFGKQKHT 355 (385)
T ss_dssp HHHTEEEEEEEEEEECCTTS--CHHHHHHHHHHHHTTCCCE
T ss_pred HHHhcCCCcEEEEEeCCCcC--CHHHHHHHHHHHHHHcCCc
Confidence 89999999999988754321 1222223444556666665
No 242
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=95.81 E-value=0.0029 Score=64.95 Aligned_cols=95 Identities=13% Similarity=0.134 Sum_probs=67.0
Q ss_pred cChHHHHHHHHHHHHHHhhhcC---CCeEEEEccCCC-CCCCCCcccEEEeccccC-----------CCC-hHHHHHHHH
Q 022411 19 LPVSAVLNAIRDLGDEAVEQCD---PQIITQASSLSQ-LPVESFSIDTVLSISSSH-----------ELP-GDQLLEEIS 82 (297)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~~---~~v~~~~~d~~~-Lp~~d~sfD~Vls~~~~~-----------~~~-~~~~L~ei~ 82 (297)
|+..|+++.+++.|+++++... .++.++++|+.. ++....+||+|++..... ... ...++.++.
T Consensus 565 V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~ 644 (703)
T 3v97_A 565 TTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLK 644 (703)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHH
Confidence 5567889999999998875432 479999999875 455568999999865321 111 256788999
Q ss_pred hcccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCcc
Q 022411 83 RVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFL 121 (297)
Q Consensus 83 RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv 121 (297)
++|+|||.|++......-. .. ...+...||.
T Consensus 645 ~~LkpgG~L~~s~~~~~~~--~~------~~~l~~~g~~ 675 (703)
T 3v97_A 645 RLLRAGGTIMFSNNKRGFR--MD------LDGLAKLGLK 675 (703)
T ss_dssp HHEEEEEEEEEEECCTTCC--CC------HHHHHHTTEE
T ss_pred HhcCCCcEEEEEECCcccc--cC------HHHHHHcCCc
Confidence 9999999999877542211 11 2345667887
No 243
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=95.80 E-value=0.0058 Score=56.76 Aligned_cols=75 Identities=12% Similarity=0.172 Sum_probs=58.9
Q ss_pred ccChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCCCCCCCcccEEEeccccCCCChHHHHHHHHhcccCCcEEEEEe
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYK 95 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i~~ 95 (297)
.|+..|+++.+++.|+++++.. ..++.++.+|+..+. .+||+|++..... ...++.++.++|+|||.+++..
T Consensus 218 ~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP~~---~~~~l~~~~~~L~~gG~l~~~~ 291 (336)
T 2yx1_A 218 KIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLPKF---AHKFIDKALDIVEEGGVIHYYT 291 (336)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCTTT---GGGGHHHHHHHEEEEEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCcHh---HHHHHHHHHHHcCCCCEEEEEE
Confidence 3556788889999998876544 247999999998775 7899999864322 2468899999999999999887
Q ss_pred cCC
Q 022411 96 KLT 98 (297)
Q Consensus 96 ~~~ 98 (297)
...
T Consensus 292 ~~~ 294 (336)
T 2yx1_A 292 IGK 294 (336)
T ss_dssp EES
T ss_pred eec
Confidence 654
No 244
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=95.70 E-value=0.0093 Score=56.96 Aligned_cols=92 Identities=12% Similarity=-0.076 Sum_probs=61.9
Q ss_pred cCceEEEeecCC------------ccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCC-CCCCCcccEEEeccccCCC
Q 022411 6 MQSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQL-PVESFSIDTVLSISSSHEL 72 (297)
Q Consensus 6 ~~~~VLll~~~~------------~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~L-p~~d~sfD~Vls~~~~~~~ 72 (297)
.|.+||-+..++ .|+..|+++.|++.|+++++.......+.++|+..+ +...+.||+|++.......
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f~~ 293 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTLVK 293 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCCCS
T ss_pred CCCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcCCC
Confidence 366777665443 355668889999999988765443345668887653 2213349999987543111
Q ss_pred ---------C-hHHHHHHHHhcccCCcEEEEEecC
Q 022411 73 ---------P-GDQLLEEISRVLKPGGTILIYKKL 97 (297)
Q Consensus 73 ---------~-~~~~L~ei~RvLKPGG~l~i~~~~ 97 (297)
. ...++.++.++|||||.|++....
T Consensus 294 ~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s 328 (393)
T 4dmg_A 294 RPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCS 328 (393)
T ss_dssp SGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 1 147888899999999999877654
No 245
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=95.63 E-value=0.011 Score=50.39 Aligned_cols=58 Identities=17% Similarity=0.219 Sum_probs=42.4
Q ss_pred CCeEEEEccCCCCCCCC-----------CcccEEEeccccCCC-----C-------hHHHHHHHHhcccCCcEEEEEecC
Q 022411 41 PQIITQASSLSQLPVES-----------FSIDTVLSISSSHEL-----P-------GDQLLEEISRVLKPGGTILIYKKL 97 (297)
Q Consensus 41 ~~v~~~~~d~~~Lp~~d-----------~sfD~Vls~~~~~~~-----~-------~~~~L~ei~RvLKPGG~l~i~~~~ 97 (297)
.++.++++|+...+... ++||+|++....... . ...++.++.++|||||.|++..+.
T Consensus 62 ~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~ 141 (191)
T 3dou_A 62 AGVRFIRCDIFKETIFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQ 141 (191)
T ss_dssp TTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCeEEEEccccCHHHHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcC
Confidence 47899999998765211 489999997532211 0 146788899999999999988765
Q ss_pred C
Q 022411 98 T 98 (297)
Q Consensus 98 ~ 98 (297)
.
T Consensus 142 ~ 142 (191)
T 3dou_A 142 G 142 (191)
T ss_dssp S
T ss_pred C
Confidence 3
No 246
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=95.58 E-value=0.0097 Score=53.72 Aligned_cols=77 Identities=9% Similarity=0.011 Sum_probs=62.0
Q ss_pred CccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEeccccCCCC---hHHHHHHHHhcccCCcEEEE
Q 022411 17 KILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP---GDQLLEEISRVLKPGGTILI 93 (297)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~---~~~~L~ei~RvLKPGG~l~i 93 (297)
..+..-|+...|++.+++.+.....+..+.++|...-|++. +||+|+++-++|++. ....+ .++..|+++|.++-
T Consensus 127 ~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~-~~DvvLllk~lh~LE~q~~~~~~-~ll~aL~~~~vvVs 204 (253)
T 3frh_A 127 ASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAE-AGDLALIFKLLPLLEREQAGSAM-ALLQSLNTPRMAVS 204 (253)
T ss_dssp SEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCC-BCSEEEEESCHHHHHHHSTTHHH-HHHHHCBCSEEEEE
T ss_pred CeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCC-CcchHHHHHHHHHhhhhchhhHH-HHHHHhcCCCEEEE
Confidence 34446688999999999887666788899999998887665 899999998888875 23444 89999999988876
Q ss_pred Ee
Q 022411 94 YK 95 (297)
Q Consensus 94 ~~ 95 (297)
..
T Consensus 205 fP 206 (253)
T 3frh_A 205 FP 206 (253)
T ss_dssp EE
T ss_pred cC
Confidence 65
No 247
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=95.57 E-value=0.022 Score=51.98 Aligned_cols=113 Identities=9% Similarity=0.005 Sum_probs=74.0
Q ss_pred cccCceEEEeecCCc-------------cChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCCCCCCCcccEEEeccc
Q 022411 4 GKMQSAVLALSEDKI-------------LPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISS 68 (297)
Q Consensus 4 ~~~~~~VLll~~~~~-------------vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~ 68 (297)
++.|.+||-+..|+. |...|+.+...+.++++++.. ..++.+..+|+..++ ....||.|+.+..
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~-~~~~~D~Vi~~~p 201 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP-GENIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC-CCSCEEEEEECCC
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhc-cccCCCEEEECCC
Confidence 456777777655433 233466677788888776543 456999999998875 4578999998753
Q ss_pred cCCCChHHHHHHHHhcccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCcc
Q 022411 69 SHELPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFL 121 (297)
Q Consensus 69 ~~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv 121 (297)
.. ...++....++|||||.++++....... ......+.+.+.+...||.
T Consensus 202 ~~---~~~~l~~a~~~lk~gG~ih~~~~~~e~~-~~~~~~e~i~~~~~~~g~~ 250 (278)
T 3k6r_A 202 VR---THEFIPKALSIAKDGAIIHYHNTVPEKL-MPREPFETFKRITKEYGYD 250 (278)
T ss_dssp SS---GGGGHHHHHHHEEEEEEEEEEEEEEGGG-TTTTTHHHHHHHHHHTTCE
T ss_pred Cc---HHHHHHHHHHHcCCCCEEEEEeeecccc-cchhHHHHHHHHHHHcCCc
Confidence 22 3467888899999999998876543210 0011123455667778875
No 248
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=95.40 E-value=0.024 Score=50.22 Aligned_cols=113 Identities=12% Similarity=0.008 Sum_probs=76.5
Q ss_pred ccccCceEEEeecCCc--------------cChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCC-CCCCCCCcccEEEe
Q 022411 3 TGKMQSAVLALSEDKI--------------LPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLS-QLPVESFSIDTVLS 65 (297)
Q Consensus 3 ~~~~~~~VLll~~~~~--------------vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~-~Lp~~d~sfD~Vls 65 (297)
.++.|.+||-+-.|+. |..-|+.+.+++.|+++++.. ..++.++.+|+. .++.. ..||+|+.
T Consensus 12 ~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~-~~~D~Ivi 90 (225)
T 3kr9_A 12 FVSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEET-DQVSVITI 90 (225)
T ss_dssp TSCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGG-GCCCEEEE
T ss_pred hCCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccC-cCCCEEEE
Confidence 3455666776644332 234588889999999887654 336999999984 55422 26998886
Q ss_pred ccccCCCChHHHHHHHHhcccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCcccccch
Q 022411 66 ISSSHELPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQRI 126 (297)
Q Consensus 66 ~~~~~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~~~ 126 (297)
.-.-.. ....++.+..+.|+|+|+|++.-... ...+++.|..+||..++..
T Consensus 91 aG~Gg~-~i~~Il~~~~~~L~~~~~lVlq~~~~---------~~~vr~~L~~~Gf~i~~e~ 141 (225)
T 3kr9_A 91 AGMGGR-LIARILEEGLGKLANVERLILQPNNR---------EDDLRIWLQDHGFQIVAES 141 (225)
T ss_dssp EEECHH-HHHHHHHHTGGGCTTCCEEEEEESSC---------HHHHHHHHHHTTEEEEEEE
T ss_pred cCCChH-HHHHHHHHHHHHhCCCCEEEEECCCC---------HHHHHHHHHHCCCEEEEEE
Confidence 432111 03568888999999999998865421 1267788999999977654
No 249
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=95.33 E-value=0.042 Score=52.77 Aligned_cols=107 Identities=17% Similarity=0.137 Sum_probs=70.0
Q ss_pred CceEEEeecCCc------------cChHHHHHHHHHHHHHHhhhc-CCCeEEEEccCCC----CCCCCCcccEEEecccc
Q 022411 7 QSAVLALSEDKI------------LPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQ----LPVESFSIDTVLSISSS 69 (297)
Q Consensus 7 ~~~VLll~~~~~------------vt~~dlse~m~~~A~~~~~~~-~~~v~~~~~d~~~----Lp~~d~sfD~Vls~~~~ 69 (297)
+.+||-|--|+. |+..|+++.|++.|+++++.. ..++.++.+|+.. +|+.+++||+|++....
T Consensus 287 ~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~dPPr 366 (433)
T 1uwv_A 287 EDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPAR 366 (433)
T ss_dssp TCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEECCCT
T ss_pred CCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEECCCC
Confidence 456666654433 335578889999999887544 3489999999976 45677899999997644
Q ss_pred CCCChHHHHHHHHhcccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCccccc
Q 022411 70 HELPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQ 124 (297)
Q Consensus 70 ~~~~~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~ 124 (297)
... ..++..+. .++|++.+++... +.. +..-...|...||.-..
T Consensus 367 ~g~--~~~~~~l~-~~~p~~ivyvsc~-------p~t-lard~~~l~~~Gy~~~~ 410 (433)
T 1uwv_A 367 AGA--AGVMQQII-KLEPIRIVYVSCN-------PAT-LARDSEALLKAGYTIAR 410 (433)
T ss_dssp TCC--HHHHHHHH-HHCCSEEEEEESC-------HHH-HHHHHHHHHHTTCEEEE
T ss_pred ccH--HHHHHHHH-hcCCCeEEEEECC-------hHH-HHhhHHHHHHCCcEEEE
Confidence 332 24555554 4899999887642 221 21223456668987544
No 250
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=95.29 E-value=0.0089 Score=53.85 Aligned_cols=72 Identities=17% Similarity=0.254 Sum_probs=49.8
Q ss_pred CCeEEEEccCCC-CCCCCC----cccEEEec-cccCCCC---hHHHHHHHHhcccCCcEEEEEecCCCCccchHHHHHHH
Q 022411 41 PQIITQASSLSQ-LPVESF----SIDTVLSI-SSSHELP---GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISAL 111 (297)
Q Consensus 41 ~~v~~~~~d~~~-Lp~~d~----sfD~Vls~-~~~~~~~---~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l 111 (297)
.++.++.+|+.. +|.-+. .||+|+.- ++....| ...++.+++|.|+|||+|+.+... ..+
T Consensus 150 ~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tysaa-----------~~v 218 (257)
T 2qy6_A 150 VTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTSA-----------GFV 218 (257)
T ss_dssp EEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEESCCB-----------HHH
T ss_pred eEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEEEeCC-----------HHH
Confidence 457788999865 453222 79999984 3221111 367999999999999999853321 156
Q ss_pred HHHHHHCCcccc
Q 022411 112 EGKLLLAGFLDA 123 (297)
Q Consensus 112 ~~~L~laGFv~v 123 (297)
++.|..+||...
T Consensus 219 rr~L~~aGF~v~ 230 (257)
T 2qy6_A 219 RRGLQEAGFTMQ 230 (257)
T ss_dssp HHHHHHHTEEEE
T ss_pred HHHHHHCCCEEE
Confidence 788999999854
No 251
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=94.84 E-value=0.033 Score=53.54 Aligned_cols=76 Identities=12% Similarity=0.017 Sum_probs=54.0
Q ss_pred hHHHHHHHHHHHHHHhhhcCC---CeEEEEccCCCCCCCCCcccEEEeccccCCCC---h---------------HHHHH
Q 022411 21 VSAVLNAIRDLGDEAVEQCDP---QIITQASSLSQLPVESFSIDTVLSISSSHELP---G---------------DQLLE 79 (297)
Q Consensus 21 ~~dlse~m~~~A~~~~~~~~~---~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~---~---------------~~~L~ 79 (297)
..|+.+.+.++|+.+...... ++.+.++|....+.. ..||+|+++..++... . ..+++
T Consensus 213 G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 291 (445)
T 2okc_A 213 GVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQ 291 (445)
T ss_dssp EEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHH
T ss_pred EEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHH
Confidence 445556778888766543222 677888888776644 3899999986554321 1 37899
Q ss_pred HHHhcccCCcEEEEEecC
Q 022411 80 EISRVLKPGGTILIYKKL 97 (297)
Q Consensus 80 ei~RvLKPGG~l~i~~~~ 97 (297)
++++.|||||++.+..+.
T Consensus 292 ~~~~~Lk~gG~~a~V~p~ 309 (445)
T 2okc_A 292 HMMLMLKTGGRAAVVLPD 309 (445)
T ss_dssp HHHHHEEEEEEEEEEEEH
T ss_pred HHHHHhccCCEEEEEECC
Confidence 999999999999887753
No 252
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=94.83 E-value=0.041 Score=52.97 Aligned_cols=74 Identities=16% Similarity=0.136 Sum_probs=52.6
Q ss_pred ccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEeccccCCCChHHHHHHHHhcccCCcEEEEEe
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYK 95 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i~~ 95 (297)
.|+..|+++.|++.|++++......+.++.+|+..+.. . +||+|++........ ..++..+ +.|+|+|.+++..
T Consensus 314 ~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~-~-~fD~Vv~dPPr~g~~-~~~~~~l-~~l~p~givyvsc 387 (425)
T 2jjq_A 314 NVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVSV-K-GFDTVIVDPPRAGLH-PRLVKRL-NREKPGVIVYVSC 387 (425)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCC-T-TCSEEEECCCTTCSC-HHHHHHH-HHHCCSEEEEEES
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcCc-c-CCCEEEEcCCccchH-HHHHHHH-HhcCCCcEEEEEC
Confidence 34455788899999988775433239999999988752 2 899999976433222 3456555 4599999999864
No 253
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=94.64 E-value=0.064 Score=50.97 Aligned_cols=79 Identities=11% Similarity=0.111 Sum_probs=61.0
Q ss_pred ccChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCCCCCCCcccEEEeccccCC-CC----hHHHHHHHHhcccC--C
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSHE-LP----GDQLLEEISRVLKP--G 88 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~-~~----~~~~L~ei~RvLKP--G 88 (297)
.+...|+.+.|++.|+++++.. ...+.+.++|+..++.+. +||+|+++..+.. +. ...++.++.+.||+ |
T Consensus 258 ~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~~-~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g 336 (384)
T 3ldg_A 258 DISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNK-INGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKT 336 (384)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCCC-CSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTT
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCccC-CcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCC
Confidence 3556788899999999887654 346999999999988664 8999999976542 21 35677778888887 9
Q ss_pred cEEEEEecC
Q 022411 89 GTILIYKKL 97 (297)
Q Consensus 89 G~l~i~~~~ 97 (297)
|++++....
T Consensus 337 ~~~~iit~~ 345 (384)
T 3ldg_A 337 WSQFILTND 345 (384)
T ss_dssp SEEEEEESC
T ss_pred cEEEEEECC
Confidence 999988764
No 254
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=94.46 E-value=0.052 Score=51.67 Aligned_cols=79 Identities=13% Similarity=0.120 Sum_probs=59.7
Q ss_pred ccChHHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCCCCCCCcccEEEeccccCC-CC----hHHHHHHHHhcccC--C
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSHE-LP----GDQLLEEISRVLKP--G 88 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~-~~----~~~~L~ei~RvLKP--G 88 (297)
.+...|+.+.|++.|++++... ..++.+.++|+..++.+ .+||+|+++..+.. +. ...++.++.++||+ |
T Consensus 265 ~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g 343 (393)
T 3k0b_A 265 NIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPT 343 (393)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCC
Confidence 4567788899999999887654 34699999999998865 48999999965532 11 24567777777776 9
Q ss_pred cEEEEEecC
Q 022411 89 GTILIYKKL 97 (297)
Q Consensus 89 G~l~i~~~~ 97 (297)
|.+++....
T Consensus 344 ~~~~iit~~ 352 (393)
T 3k0b_A 344 WSVYVLTSY 352 (393)
T ss_dssp CEEEEEECC
T ss_pred CEEEEEECC
Confidence 999988764
No 255
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=94.41 E-value=0.019 Score=54.45 Aligned_cols=92 Identities=15% Similarity=0.111 Sum_probs=62.4
Q ss_pred cCceEEEeecCC-------------ccChHHHHHHHHHHHHHHhhhc------C---CCeEEEEccCCCCCC----CCCc
Q 022411 6 MQSAVLALSEDK-------------ILPVSAVLNAIRDLGDEAVEQC------D---PQIITQASSLSQLPV----ESFS 59 (297)
Q Consensus 6 ~~~~VLll~~~~-------------~vt~~dlse~m~~~A~~~~~~~------~---~~v~~~~~d~~~Lp~----~d~s 59 (297)
++.+||.|-.|+ .++..++.+.+++.|++..... . .++.++.+|+...-- ..+.
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~ 267 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 267 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCC
Confidence 355788886553 3445677789999998865321 1 268999999875421 3578
Q ss_pred ccEEEecccc-C------CCChHHHHHHH----HhcccCCcEEEEEecC
Q 022411 60 IDTVLSISSS-H------ELPGDQLLEEI----SRVLKPGGTILIYKKL 97 (297)
Q Consensus 60 fD~Vls~~~~-~------~~~~~~~L~ei----~RvLKPGG~l~i~~~~ 97 (297)
||+|+.-... . ++....+++.+ .++|+|||.+++....
T Consensus 268 fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s 316 (364)
T 2qfm_A 268 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 316 (364)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred ceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCC
Confidence 9999987532 1 12235667776 8999999999987543
No 256
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=94.35 E-value=0.075 Score=48.54 Aligned_cols=101 Identities=12% Similarity=0.090 Sum_probs=71.0
Q ss_pred ccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEeccccCCCCh---HHHHHHHHhcccCCcEEEEE
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIY 94 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~~---~~~L~ei~RvLKPGG~l~i~ 94 (297)
.+..-|+.+.|++.+++++........+.+.|...-+ +...||+|+++-++|++.. ...+ +++..|+|+|.++-.
T Consensus 158 ~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~-p~~~~DvaL~lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSf 235 (281)
T 3lcv_B 158 VYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDR-LDEPADVTLLLKTLPCLETQQRGSGW-EVIDIVNSPNIVVTF 235 (281)
T ss_dssp EEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSC-CCSCCSEEEETTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccC-CCCCcchHHHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEEec
Confidence 4446689999999999988776777888888887554 4678999999999888862 3566 999999999999876
Q ss_pred ec--CCCCccchHHHH-HHHHHHHHHCCc
Q 022411 95 KK--LTSDKGDVDKAI-SALEGKLLLAGF 120 (297)
Q Consensus 95 ~~--~~~~~g~~~~~~-~~l~~~L~laGF 120 (297)
+. ..+....+.... ..++..+...|.
T Consensus 236 p~ksl~Grs~gm~~~Y~~~~e~~~~~~g~ 264 (281)
T 3lcv_B 236 PTKSLGQRSKGMFQNYSQSFESQARERSC 264 (281)
T ss_dssp ECC-------CHHHHHHHHHHHHHHHHTC
T ss_pred cchhhcCCCcchhhHHHHHHHHHHHhcCC
Confidence 65 222111223222 345555666776
No 257
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=94.01 E-value=0.068 Score=50.69 Aligned_cols=80 Identities=13% Similarity=0.057 Sum_probs=61.1
Q ss_pred CccChHHHHHHHHHHHHHHhhhcC--CCeEEEEccCCCCCCCCCcccEEEeccccCCCC-----hHHHHHHHHhcccC--
Q 022411 17 KILPVSAVLNAIRDLGDEAVEQCD--PQIITQASSLSQLPVESFSIDTVLSISSSHELP-----GDQLLEEISRVLKP-- 87 (297)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~~--~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~-----~~~~L~ei~RvLKP-- 87 (297)
..+...|+.+.|++.|++++.... .++.+.++|+..++.+ .+||+|+++-.+..-. ...+++++.++||+
T Consensus 258 ~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~ 336 (385)
T 3ldu_A 258 FKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLK 336 (385)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSB
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCC
Confidence 345677888999999998876543 3699999999988765 5899999987654321 25677778888887
Q ss_pred CcEEEEEecC
Q 022411 88 GGTILIYKKL 97 (297)
Q Consensus 88 GG~l~i~~~~ 97 (297)
||.+++....
T Consensus 337 g~~~~iit~~ 346 (385)
T 3ldu_A 337 NWSYYLITSY 346 (385)
T ss_dssp SCEEEEEESC
T ss_pred CCEEEEEECC
Confidence 9999888764
No 258
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=93.12 E-value=0.16 Score=46.71 Aligned_cols=89 Identities=16% Similarity=0.184 Sum_probs=60.0
Q ss_pred ceEEEeecCCccC--------------hHHHHHHHHHHHHHHh------hhcCCCeEEEEccCCC-CCCCCCcccEEEec
Q 022411 8 SAVLALSEDKILP--------------VSAVLNAIRDLGDEAV------EQCDPQIITQASSLSQ-LPVESFSIDTVLSI 66 (297)
Q Consensus 8 ~~VLll~~~~~vt--------------~~dlse~m~~~A~~~~------~~~~~~v~~~~~d~~~-Lp~~d~sfD~Vls~ 66 (297)
.+||++--|...+ +-++-+++++.+++-. ...++++..+.+|+.. +.-..++||+|+.-
T Consensus 85 k~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi~D 164 (294)
T 3o4f_A 85 KHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISD 164 (294)
T ss_dssp CEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEEES
T ss_pred CeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEEEe
Confidence 4677775544433 3344456777776532 1236899999998864 34456789999976
Q ss_pred cccC-----CCChHHHHHHHHhcccCCcEEEEEec
Q 022411 67 SSSH-----ELPGDQLLEEISRVLKPGGTILIYKK 96 (297)
Q Consensus 67 ~~~~-----~~~~~~~L~ei~RvLKPGG~l~i~~~ 96 (297)
..-. .+-...+++.+.|+|+|||.++.+..
T Consensus 165 ~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~ 199 (294)
T 3o4f_A 165 CTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp CCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecC
Confidence 5311 12246899999999999999998753
No 259
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=92.79 E-value=0.057 Score=49.19 Aligned_cols=53 Identities=2% Similarity=-0.191 Sum_probs=36.6
Q ss_pred ccChHHHHHHHHHHHHHHhhhc-CCCeEEEEccCCCCCCCCCcccEEEeccccCCC
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVESFSIDTVLSISSSHEL 72 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~-~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~ 72 (297)
.++..|+.+.|++.++++.... ..++.++.+|+..++++ +||+|+++..+++.
T Consensus 66 ~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~~--~~D~Vv~n~py~~~ 119 (299)
T 2h1r_A 66 KVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVFP--KFDVCTANIPYKIS 119 (299)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCCC--CCSEEEEECCGGGH
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCcc--cCCEEEEcCCcccc
Confidence 3445577889999998876433 36899999999988764 89999998766653
No 260
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=92.72 E-value=0.047 Score=49.59 Aligned_cols=85 Identities=19% Similarity=0.184 Sum_probs=52.0
Q ss_pred CCCeEEEEccCCC-CC-CCCCcccEEEeccccCCC--------------------C-hHHHHHHHHhcccCCcEEEEEec
Q 022411 40 DPQIITQASSLSQ-LP-VESFSIDTVLSISSSHEL--------------------P-GDQLLEEISRVLKPGGTILIYKK 96 (297)
Q Consensus 40 ~~~v~~~~~d~~~-Lp-~~d~sfD~Vls~~~~~~~--------------------~-~~~~L~ei~RvLKPGG~l~i~~~ 96 (297)
...+.++++|... ++ +++++||+|++.-.+... . ...++.++.|+|||||.+++...
T Consensus 19 ~~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 19 FGVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp --CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 3467888998765 32 568899999998654311 0 13567899999999999987754
Q ss_pred CCC----Cccc--hHHHHHHHHHHHHHCCccccc
Q 022411 97 LTS----DKGD--VDKAISALEGKLLLAGFLDAQ 124 (297)
Q Consensus 97 ~~~----~~g~--~~~~~~~l~~~L~laGFv~v~ 124 (297)
... ..+. .-.....+...+..+||....
T Consensus 99 d~~~~~~~~g~~~~~~~~~~l~~~~~~~Gf~~~~ 132 (297)
T 2zig_A 99 DVAVARRRFGRHLVFPLHADIQVRCRKLGFDNLN 132 (297)
T ss_dssp CEEEECC----EEEECHHHHHHHHHHHTTCEEEE
T ss_pred CCccccccCCcccccccHHHHHHHHHHcCCeeec
Confidence 210 0010 000112455667789997544
No 261
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=91.97 E-value=0.39 Score=44.83 Aligned_cols=79 Identities=19% Similarity=0.146 Sum_probs=51.5
Q ss_pred CCeEEEEccCCCCCCCCCcccEEEeccccCC----------CCh--------------------HHHHHHHHhcccCCcE
Q 022411 41 PQIITQASSLSQLPVESFSIDTVLSISSSHE----------LPG--------------------DQLLEEISRVLKPGGT 90 (297)
Q Consensus 41 ~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~----------~~~--------------------~~~L~ei~RvLKPGG~ 90 (297)
.++.++++|+...+ +...||+|+++-.+.. +.. ..++.++.++|+|||+
T Consensus 81 ~~~~~~~~D~~~~~-~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~ 159 (421)
T 2ih2_A 81 PWAEGILADFLLWE-PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGV 159 (421)
T ss_dssp TTEEEEESCGGGCC-CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEE
T ss_pred CCCcEEeCChhhcC-ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCE
Confidence 36888899988765 3468999999743221 211 1568899999999999
Q ss_pred EEEEecCCCCccchHHHHHHHHHHHHHCCcccc
Q 022411 91 ILIYKKLTSDKGDVDKAISALEGKLLLAGFLDA 123 (297)
Q Consensus 91 l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v 123 (297)
+.+..+...-... ....+++.+...|+..+
T Consensus 160 ~~~i~p~~~l~~~---~~~~lr~~l~~~~~~~i 189 (421)
T 2ih2_A 160 LVFVVPATWLVLE---DFALLREFLAREGKTSV 189 (421)
T ss_dssp EEEEEEGGGGTCG---GGHHHHHHHHHHSEEEE
T ss_pred EEEEEChHHhcCc---cHHHHHHHHHhcCCeEE
Confidence 9888764211011 12256666777777433
No 262
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=91.72 E-value=0.4 Score=43.69 Aligned_cols=56 Identities=18% Similarity=0.152 Sum_probs=41.9
Q ss_pred CeEEEEccCCCCCCCCCcccEEEeccccC----CCC-h--HHHHHHHHhcccCC-cEEEEEecC
Q 022411 42 QIITQASSLSQLPVESFSIDTVLSISSSH----ELP-G--DQLLEEISRVLKPG-GTILIYKKL 97 (297)
Q Consensus 42 ~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~----~~~-~--~~~L~ei~RvLKPG-G~l~i~~~~ 97 (297)
++.+...+++...++...||+|++..+.+ +.. . -.+|..+.++|||| |.|++..+.
T Consensus 123 ~ii~~~~~~dv~~l~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 123 NIITFKDKTDIHRLEPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp GGEEEECSCCTTTSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred CeEEEeccceehhcCCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 55666676666678889999999987555 332 1 23568889999999 999997765
No 263
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=90.71 E-value=0.0036 Score=55.20 Aligned_cols=88 Identities=14% Similarity=0.098 Sum_probs=51.7
Q ss_pred ccCceEEEeecCCccC------------hHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCC-CcccEEEeccccCC
Q 022411 5 KMQSAVLALSEDKILP------------VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVES-FSIDTVLSISSSHE 71 (297)
Q Consensus 5 ~~~~~VLll~~~~~vt------------~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d-~sfD~Vls~~~~~~ 71 (297)
+.+.+||-+--|+..- ..|+++.|++.++++.. ...++.++.+|+..+++++ ++| .|+++..++.
T Consensus 28 ~~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~-~~~~v~~~~~D~~~~~~~~~~~f-~vv~n~Py~~ 105 (245)
T 1yub_A 28 KETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLK-LNTRVTLIHQDILQFQFPNKQRY-KIVGNIPYHL 105 (245)
T ss_dssp CSSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTT-TCSEEEECCSCCTTTTCCCSSEE-EEEEECCSSS
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhc-cCCceEEEECChhhcCcccCCCc-EEEEeCCccc
Confidence 3456777776554433 22334445444443322 2357899999999998874 689 6777654332
Q ss_pred CC------------hHHHH----HHHHhcccCCcEEEEE
Q 022411 72 LP------------GDQLL----EEISRVLKPGGTILIY 94 (297)
Q Consensus 72 ~~------------~~~~L----~ei~RvLKPGG~l~i~ 94 (297)
.. ....+ ..+.|+|+|||+|++.
T Consensus 106 ~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~ 144 (245)
T 1yub_A 106 STQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLL 144 (245)
T ss_dssp CHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHH
T ss_pred cHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhh
Confidence 11 12223 5577888888776543
No 264
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=90.63 E-value=0.32 Score=49.72 Aligned_cols=79 Identities=19% Similarity=0.102 Sum_probs=54.7
Q ss_pred ccChHHHHHHHHHHHHHHhhhcC--CCeEEEEccCCCC--CCCCCcccEEEeccccCC-CC----hHHH---HHHHHhcc
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQCD--PQIITQASSLSQL--PVESFSIDTVLSISSSHE-LP----GDQL---LEEISRVL 85 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~--~~v~~~~~d~~~L--p~~d~sfD~Vls~~~~~~-~~----~~~~---L~ei~RvL 85 (297)
.+...|+.+.|++.|+.++.... ..+.+.++|+..+ |...+.||+|+++-.+.. +. ...+ +.++++.+
T Consensus 258 ~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~ 337 (703)
T 3v97_A 258 HFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQ 337 (703)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHH
T ss_pred cEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhh
Confidence 34466788899999998876543 3489999999887 444458999999965432 11 2333 44455556
Q ss_pred cCCcEEEEEec
Q 022411 86 KPGGTILIYKK 96 (297)
Q Consensus 86 KPGG~l~i~~~ 96 (297)
.|||++++...
T Consensus 338 ~~g~~~~ilt~ 348 (703)
T 3v97_A 338 FGGWNLSLFSA 348 (703)
T ss_dssp CTTCEEEEEES
T ss_pred CCCCeEEEEeC
Confidence 68999998755
No 265
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=90.29 E-value=0.2 Score=49.65 Aligned_cols=100 Identities=11% Similarity=-0.041 Sum_probs=61.3
Q ss_pred ChHHHHHHHHHHHHHHhhhcC-CC-----eEEEEccCCCCC-CCCCcccEEEeccccCCCC---------------hHHH
Q 022411 20 PVSAVLNAIRDLGDEAVEQCD-PQ-----IITQASSLSQLP-VESFSIDTVLSISSSHELP---------------GDQL 77 (297)
Q Consensus 20 t~~dlse~m~~~A~~~~~~~~-~~-----v~~~~~d~~~Lp-~~d~sfD~Vls~~~~~~~~---------------~~~~ 77 (297)
...++.+.+.++|+.++.... .. +.+..+|....+ .....||+|+++..+.... ...+
T Consensus 215 ~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~F 294 (541)
T 2ar0_A 215 IGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCF 294 (541)
T ss_dssp EEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHH
T ss_pred EEEcCCHHHHHHHHHHHHHhCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHH
Confidence 344566777788876543222 22 667788776543 4467899999986543211 1368
Q ss_pred HHHHHhcccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCcc
Q 022411 78 LEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFL 121 (297)
Q Consensus 78 L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv 121 (297)
+.++.+.|||||++.+..+...-... .....+++.|...+.+
T Consensus 295 l~~~l~~Lk~gGr~a~V~p~~~L~~~--~~~~~iR~~L~~~~~l 336 (541)
T 2ar0_A 295 MQHIIETLHPGGRAAVVVPDNVLFEG--GKGTDIRRDLMDKCHL 336 (541)
T ss_dssp HHHHHHHEEEEEEEEEEEEHHHHHCC--THHHHHHHHHHHHEEE
T ss_pred HHHHHHHhCCCCEEEEEecCcceecC--cHHHHHHHHHhhcCCE
Confidence 99999999999999887653200000 0123566666655543
No 266
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=90.14 E-value=0.42 Score=41.43 Aligned_cols=74 Identities=9% Similarity=-0.063 Sum_probs=47.9
Q ss_pred ccChHHHHHHHHHHHHHHhhhc----CCCeEEEEccCCC---------------CC--------C-CCCcccEEEecccc
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQC----DPQIITQASSLSQ---------------LP--------V-ESFSIDTVLSISSS 69 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~----~~~v~~~~~d~~~---------------Lp--------~-~d~sfD~Vls~~~~ 69 (297)
.++..+.-+++.+.|+++.++. ..+|.++.+++.. ++ + ..++||+|+.-...
T Consensus 53 ~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k 132 (202)
T 3cvo_A 53 HVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRF 132 (202)
T ss_dssp EEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSS
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCCC
Confidence 3333344456677777665543 3478899998643 22 2 23689999987632
Q ss_pred CCCChHHHHHHHHhcccCCcEEEEEe
Q 022411 70 HELPGDQLLEEISRVLKPGGTILIYK 95 (297)
Q Consensus 70 ~~~~~~~~L~ei~RvLKPGG~l~i~~ 95 (297)
. ...+..+.+.|+|||++++-+
T Consensus 133 ~----~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 133 R----VGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp H----HHHHHHHHHHCSSCEEEEETT
T ss_pred c----hhHHHHHHHhcCCCeEEEEeC
Confidence 2 355666789999999997544
No 267
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=89.53 E-value=0.25 Score=45.41 Aligned_cols=83 Identities=17% Similarity=0.049 Sum_probs=51.2
Q ss_pred CCeEEEEccCCC-CC-CCCCcccEEEeccccCCC--------------C-hHHHHHHHHhcccCCcEEEEEecCCCCccc
Q 022411 41 PQIITQASSLSQ-LP-VESFSIDTVLSISSSHEL--------------P-GDQLLEEISRVLKPGGTILIYKKLTSDKGD 103 (297)
Q Consensus 41 ~~v~~~~~d~~~-Lp-~~d~sfD~Vls~~~~~~~--------------~-~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~ 103 (297)
....++.+|... |. +++++||+|++.-.+... . ....+.++.|+|||||.+++........+.
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~~~~g~ 92 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYMKGV 92 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEETTE
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCEecCCC
Confidence 456777887643 43 568899999987543211 1 367889999999999999887543200010
Q ss_pred ---hHHHHHHHHHHHHHCCcccc
Q 022411 104 ---VDKAISALEGKLLLAGFLDA 123 (297)
Q Consensus 104 ---~~~~~~~l~~~L~laGFv~v 123 (297)
....+..+...+...||.-.
T Consensus 93 ~~~~~~~~~~i~~~~~~~Gf~~~ 115 (323)
T 1boo_A 93 PARSIYNFRVLIRMIDEVGFFLA 115 (323)
T ss_dssp EEECCHHHHHHHHHHHTTCCEEE
T ss_pred cccccchHHHHHHHHHhCCCEEE
Confidence 00112233345677898654
No 268
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=89.11 E-value=0.14 Score=48.47 Aligned_cols=74 Identities=11% Similarity=0.015 Sum_probs=52.2
Q ss_pred cChHHHHHHHHHHHHHHhhhc---------------C-CCeEEEEccCCCCCC-CCCcccEEEeccccCCCChHHHHHHH
Q 022411 19 LPVSAVLNAIRDLGDEAVEQC---------------D-PQIITQASSLSQLPV-ESFSIDTVLSISSSHELPGDQLLEEI 81 (297)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~---------------~-~~v~~~~~d~~~Lp~-~d~sfD~Vls~~~~~~~~~~~~L~ei 81 (297)
|+.-|+.+.+++.++++++.. . .++.+..+|+..+.. ....||+|+..- . .....++..+
T Consensus 74 V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~~~~~~fD~I~lDP-~--~~~~~~l~~a 150 (378)
T 2dul_A 74 VWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAERHRYFHFIDLDP-F--GSPMEFLDTA 150 (378)
T ss_dssp EEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHHSTTCEEEEEECC-S--SCCHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHHhccCCCCEEEeCC-C--CCHHHHHHHH
Confidence 445567778888888876543 2 238889999865531 135799999643 1 1236789999
Q ss_pred HhcccCCcEEEEEe
Q 022411 82 SRVLKPGGTILIYK 95 (297)
Q Consensus 82 ~RvLKPGG~l~i~~ 95 (297)
.+.|||||.+++.-
T Consensus 151 ~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 151 LRSAKRRGILGVTA 164 (378)
T ss_dssp HHHEEEEEEEEEEE
T ss_pred HHhcCCCCEEEEEe
Confidence 99999999888764
No 269
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=88.20 E-value=0.69 Score=42.39 Aligned_cols=78 Identities=5% Similarity=-0.121 Sum_probs=51.5
Q ss_pred ccChHHHHHHHHHHHHHHhhhc-CCCeEEEEccCCCCCCCC---CcccEEEeccc------cC------C----CC--h-
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVES---FSIDTVLSISS------SH------E----LP--G- 74 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~-~~~v~~~~~d~~~Lp~~d---~sfD~Vls~~~------~~------~----~~--~- 74 (297)
.|...|+.+.+++.++++++.. ..++.++.+|+..++... .+||.|++... +. | -+ .
T Consensus 129 ~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~ 208 (309)
T 2b9e_A 129 KIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLH 208 (309)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEEECCCCCC------------------CCHH
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHH
Confidence 3445577788889888887654 357999999998775432 57999997321 10 1 00 0
Q ss_pred ------HHHHHHHHhcccCCcEEEEEec
Q 022411 75 ------DQLLEEISRVLKPGGTILIYKK 96 (297)
Q Consensus 75 ------~~~L~ei~RvLKPGG~l~i~~~ 96 (297)
..+|...++.|+ ||+|++..-
T Consensus 209 ~l~~~Q~~iL~~a~~~l~-gG~lvYsTC 235 (309)
T 2b9e_A 209 ALAGFQQRALCHALTFPS-LQRLVYSTC 235 (309)
T ss_dssp HHHHHHHHHHHHHTTCTT-CCEEEEEES
T ss_pred HHHHHHHHHHHHHHhccC-CCEEEEECC
Confidence 245777777787 998887653
No 270
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=87.99 E-value=0.39 Score=43.92 Aligned_cols=65 Identities=11% Similarity=0.069 Sum_probs=48.5
Q ss_pred cCceEEEeecCCc------------cChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEeccccCC
Q 022411 6 MQSAVLALSEDKI------------LPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHE 71 (297)
Q Consensus 6 ~~~~VLll~~~~~------------vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~ 71 (297)
.+++||-+-.|+. |+..|+.+.|++.++++.. ...++.++.+|+..+++++.+||+|+++..+++
T Consensus 50 ~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~-~~~~v~vi~gD~l~~~~~~~~fD~Iv~NlPy~i 126 (295)
T 3gru_A 50 KDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKE-LYNNIEIIWGDALKVDLNKLDFNKVVANLPYQI 126 (295)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHH-HCSSEEEEESCTTTSCGGGSCCSEEEEECCGGG
T ss_pred CcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhc-cCCCeEEEECchhhCCcccCCccEEEEeCcccc
Confidence 4566776655433 3344666788888877654 456899999999999999989999999876654
No 271
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=86.95 E-value=0.51 Score=43.64 Aligned_cols=72 Identities=21% Similarity=0.246 Sum_probs=49.5
Q ss_pred CeEEEEccCC-CCC-CCCCcccEEEec-cccCCCC---hHHHHHHHHhcccCCcEEEEEecCCCCccchHHHHHHHHHHH
Q 022411 42 QIITQASSLS-QLP-VESFSIDTVLSI-SSSHELP---GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKL 115 (297)
Q Consensus 42 ~v~~~~~d~~-~Lp-~~d~sfD~Vls~-~~~~~~~---~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L 115 (297)
.+.+..+|+. .++ +++..||+|+.- ++...-| ...++++|+|.++|||+|.-+... ..+++.|
T Consensus 167 ~L~l~~GDa~~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laTYtaa-----------g~VRR~L 235 (308)
T 3vyw_A 167 SLKVLLGDARKRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVSYSSS-----------LSVRKSL 235 (308)
T ss_dssp EEEEEESCHHHHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEESCCC-----------HHHHHHH
T ss_pred EEEEEechHHHHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEEEeCc-----------HHHHHHH
Confidence 3556678874 344 345689999974 3222222 378999999999999999733221 1678899
Q ss_pred HHCCccccc
Q 022411 116 LLAGFLDAQ 124 (297)
Q Consensus 116 ~laGFv~v~ 124 (297)
..+||....
T Consensus 236 ~~aGF~V~k 244 (308)
T 3vyw_A 236 LTLGFKVGS 244 (308)
T ss_dssp HHTTCEEEE
T ss_pred HHCCCEEEe
Confidence 999998543
No 272
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=86.65 E-value=0.64 Score=46.09 Aligned_cols=100 Identities=10% Similarity=0.032 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHHhhhc--CCCeEEEEccCCCCC-CCCCcccEEEeccccCC-------------------------CC
Q 022411 22 SAVLNAIRDLGDEAVEQC--DPQIITQASSLSQLP-VESFSIDTVLSISSSHE-------------------------LP 73 (297)
Q Consensus 22 ~dlse~m~~~A~~~~~~~--~~~v~~~~~d~~~Lp-~~d~sfD~Vls~~~~~~-------------------------~~ 73 (297)
.++...+..+|+.++... ..++.+..+|....+ +....||+|+++-.+.. ++
T Consensus 289 ~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~ 368 (544)
T 3khk_A 289 QESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTP 368 (544)
T ss_dssp CCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCC
T ss_pred EeCCHHHHHHHHHHHHHhCCCcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccC
Confidence 344556666666554322 223333666654433 55679999999864431 22
Q ss_pred h-----HHHHHHHHhcccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCccc
Q 022411 74 G-----DQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLD 122 (297)
Q Consensus 74 ~-----~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~ 122 (297)
+ -.++.++.+.|||||++.+..+...-... ......+++.|...+.+.
T Consensus 369 ~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g~L~~~-~~~~~~iRk~Lle~~~l~ 421 (544)
T 3khk_A 369 PTGNANFAWMLHMLYHLAPTGSMALLLANGSMSSN-TNNEGEIRKTLVEQDLVE 421 (544)
T ss_dssp CTTCTHHHHHHHHHHTEEEEEEEEEEEETHHHHCC-GGGHHHHHHHHHHTTCEE
T ss_pred CCcchhHHHHHHHHHHhccCceEEEEecchhhhcC-cchHHHHHHHHHhCCcHh
Confidence 1 25899999999999999887654210000 012236777888888764
No 273
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=86.30 E-value=0.28 Score=43.11 Aligned_cols=82 Identities=5% Similarity=0.037 Sum_probs=51.3
Q ss_pred cCceEEEeecCCc------------cChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCC-CcccEEEeccccCCC
Q 022411 6 MQSAVLALSEDKI------------LPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVES-FSIDTVLSISSSHEL 72 (297)
Q Consensus 6 ~~~~VLll~~~~~------------vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d-~sfD~Vls~~~~~~~ 72 (297)
.+.+||-+--|+. ++..|+.+.|++.++++... ..++.++.+|+..+++++ ..| .|+++..+++
T Consensus 30 ~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~v~~~~~D~~~~~~~~~~~~-~vv~nlPy~~- 106 (244)
T 1qam_A 30 EHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLVD-HDNFQVLNKDILQFKFPKNQSY-KIFGNIPYNI- 106 (244)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTTT-CCSEEEECCCGGGCCCCSSCCC-EEEEECCGGG-
T ss_pred CCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHHHhhcc-CCCeEEEEChHHhCCcccCCCe-EEEEeCCccc-
Confidence 4566777755543 33457778899988876543 468999999999998875 456 5666665543
Q ss_pred ChHHHHHHHHhcccCCcEE
Q 022411 73 PGDQLLEEISRVLKPGGTI 91 (297)
Q Consensus 73 ~~~~~L~ei~RvLKPGG~l 91 (297)
....+..+.+....++.+
T Consensus 107 -~~~~l~~~l~~~~~~~~~ 124 (244)
T 1qam_A 107 -STDIIRKIVFDSIADEIY 124 (244)
T ss_dssp -HHHHHHHHHHSCCCSEEE
T ss_pred -CHHHHHHHHhcCCCCeEE
Confidence 223444444443333333
No 274
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=86.21 E-value=0.46 Score=44.31 Aligned_cols=74 Identities=7% Similarity=0.066 Sum_probs=51.9
Q ss_pred ccChHHHHHHHHHHHHHHhhhc-CCCeEEEEccCCCCC--CCC--------------CcccEEEeccccCCCChHHHHHH
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQC-DPQIITQASSLSQLP--VES--------------FSIDTVLSISSSHELPGDQLLEE 80 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~-~~~v~~~~~d~~~Lp--~~d--------------~sfD~Vls~~~~~~~~~~~~L~e 80 (297)
.|+..|+++.|++.|+++++.. ..++.++.+|+..+. +.. .+||+|+...... .+..+
T Consensus 237 ~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~-----g~~~~ 311 (369)
T 3bt7_A 237 RVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDPPRS-----GLDSE 311 (369)
T ss_dssp EEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEECCCTT-----CCCHH
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhccccccccccccccCCCCEEEECcCcc-----ccHHH
Confidence 3456688899999999877543 358999999987542 222 3799999764322 13456
Q ss_pred HHhcccCCcEEEEEec
Q 022411 81 ISRVLKPGGTILIYKK 96 (297)
Q Consensus 81 i~RvLKPGG~l~i~~~ 96 (297)
+.+.|+|+|++++..-
T Consensus 312 ~~~~l~~~g~ivyvsc 327 (369)
T 3bt7_A 312 TEKMVQAYPRILYISC 327 (369)
T ss_dssp HHHHHTTSSEEEEEES
T ss_pred HHHHHhCCCEEEEEEC
Confidence 7788889999987654
No 275
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=85.82 E-value=0.37 Score=45.95 Aligned_cols=73 Identities=12% Similarity=0.092 Sum_probs=50.9
Q ss_pred ChHHHHHHHHHHHHHHhhhcC-C-C-eEEEEccCCCCC--CCCCcccEEEeccccCCCChHHHHHHHHhcccCCcEEEEE
Q 022411 20 PVSAVLNAIRDLGDEAVEQCD-P-Q-IITQASSLSQLP--VESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIY 94 (297)
Q Consensus 20 t~~dlse~m~~~A~~~~~~~~-~-~-v~~~~~d~~~Lp--~~d~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i~ 94 (297)
+..|+.+...+.++++++... . + +.++.+|+..+- .-...||+|+... + -....++..+.+.|+|||.|++.
T Consensus 81 ~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~lDP-~--g~~~~~l~~a~~~Lk~gGll~~t 157 (392)
T 3axs_A 81 YANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDLDP-F--GTPVPFIESVALSMKRGGILSLT 157 (392)
T ss_dssp EEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEECC-S--SCCHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEECC-C--cCHHHHHHHHHHHhCCCCEEEEE
Confidence 344556777888888765432 2 3 899999885431 1145799999875 1 11356899999999999988876
Q ss_pred e
Q 022411 95 K 95 (297)
Q Consensus 95 ~ 95 (297)
-
T Consensus 158 ~ 158 (392)
T 3axs_A 158 A 158 (392)
T ss_dssp E
T ss_pred e
Confidence 5
No 276
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=84.70 E-value=1.7 Score=38.29 Aligned_cols=60 Identities=12% Similarity=0.160 Sum_probs=37.9
Q ss_pred CCCcccEEEeccccCCC--------------C-hHHHHHHHHhcccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCc
Q 022411 56 ESFSIDTVLSISSSHEL--------------P-GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGF 120 (297)
Q Consensus 56 ~d~sfD~Vls~~~~~~~--------------~-~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGF 120 (297)
++++||+|+.--.+..- . ....+.++.|+|+|+|.+++... .. ....+...+...||
T Consensus 20 ~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~~------d~--~~~~~~~~~~~~gf 91 (260)
T 1g60_A 20 ENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFNT------PF--NCAFICQYLVSKGM 91 (260)
T ss_dssp CTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC------HH--HHHHHHHHHHHTTC
T ss_pred cccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEcC------cH--HHHHHHHHHHhhcc
Confidence 46678888876433211 1 35678899999999999988641 11 11234445667888
Q ss_pred ccc
Q 022411 121 LDA 123 (297)
Q Consensus 121 v~v 123 (297)
.-.
T Consensus 92 ~~~ 94 (260)
T 1g60_A 92 IFQ 94 (260)
T ss_dssp EEE
T ss_pred cee
Confidence 643
No 277
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=79.95 E-value=5.7 Score=39.22 Aligned_cols=100 Identities=17% Similarity=0.060 Sum_probs=64.6
Q ss_pred hHHHHHHHHHHHHHHhhhcC---CCeEEEEccCCCC--C-CCCCcccEEEeccccC--C-----------------CC--
Q 022411 21 VSAVLNAIRDLGDEAVEQCD---PQIITQASSLSQL--P-VESFSIDTVLSISSSH--E-----------------LP-- 73 (297)
Q Consensus 21 ~~dlse~m~~~A~~~~~~~~---~~v~~~~~d~~~L--p-~~d~sfD~Vls~~~~~--~-----------------~~-- 73 (297)
..++...+..+|+.+..... .++.+..+|.... | +....||+|+++-.+. | ++
T Consensus 253 G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~ 332 (542)
T 3lkd_A 253 GQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPK 332 (542)
T ss_dssp EEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCT
T ss_pred EEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCC
Confidence 34556677788876653322 3577888887655 3 4567899999985321 1 11
Q ss_pred ---hHHHHHHHHhccc-CCcEEEEEecCCCCccchHHHHHHHHHHHHHCCccc
Q 022411 74 ---GDQLLEEISRVLK-PGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLD 122 (297)
Q Consensus 74 ---~~~~L~ei~RvLK-PGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~ 122 (297)
.-.++.++.+.|| |||++.+..+...-... .....+++.|...+.+.
T Consensus 333 s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g~Lf~~--~~~~~iRk~Lle~~~l~ 383 (542)
T 3lkd_A 333 SKADFAFLLHGYYHLKQDNGVMAIVLPHGVLFRG--NAEGTIRKALLEEGAID 383 (542)
T ss_dssp TCCHHHHHHHHHHTBCTTTCEEEEEEETHHHHCC--THHHHHHHHHHHTTCEE
T ss_pred chhhHHHHHHHHHHhCCCceeEEEEecchHhhCC--chhHHHHHHHHhCCcee
Confidence 1247999999999 99999887764210000 12346778888888765
No 278
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=78.42 E-value=2 Score=39.00 Aligned_cols=68 Identities=10% Similarity=0.044 Sum_probs=48.6
Q ss_pred HHHHHHHHhhhc---CCCeEEEEccCC-CCC-CCCCcccEEEeccccCCCChHHHHHHHHhcccCCcEEEEEec
Q 022411 28 IRDLGDEAVEQC---DPQIITQASSLS-QLP-VESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKK 96 (297)
Q Consensus 28 m~~~A~~~~~~~---~~~v~~~~~d~~-~Lp-~~d~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i~~~ 96 (297)
+.+.++++.++. ..+|.++.|++. .|| ++...||+|+.-... +-+....|..+++.|+|||.+++-+.
T Consensus 173 ~~~~ar~n~~~~gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~-y~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 173 SEEEVRRNFRNYDLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL-YESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp CHHHHHHHHHHTTCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS-HHHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred HHHHHHHHHHHcCCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc-cccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 455666665543 267999999875 444 445789999987642 12235689999999999999987765
No 279
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=74.86 E-value=4.2 Score=41.16 Aligned_cols=63 Identities=17% Similarity=0.144 Sum_probs=43.9
Q ss_pred HHHHHHHHhhh--cCCCeEEEEccCCCCCCCCCcccEEEeccc----cCCCChHHHHHHHHhcccCCcEEE
Q 022411 28 IRDLGDEAVEQ--CDPQIITQASSLSQLPVESFSIDTVLSISS----SHELPGDQLLEEISRVLKPGGTIL 92 (297)
Q Consensus 28 m~~~A~~~~~~--~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~----~~~~~~~~~L~ei~RvLKPGG~l~ 92 (297)
|...+++.... ....|+++.++++.+.+| +.+|+|+|-.. +++.-+ ..|...-|.|||||.++
T Consensus 396 ~A~~a~~~v~~N~~~dkVtVI~gd~eev~LP-EKVDIIVSEwMG~fLl~E~ml-evL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 396 NAVVTLENWQFEEWGSQVTVVSSDMREWVAP-EKADIIVSELLGSFADNELSP-ECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp HHHHHHHHHHHHTTGGGEEEEESCTTTCCCS-SCEEEEECCCCBTTBGGGCHH-HHHHHHGGGEEEEEEEE
T ss_pred HHHHHHHHHHhccCCCeEEEEeCcceeccCC-cccCEEEEEcCcccccccCCH-HHHHHHHHhcCCCcEEc
Confidence 44455543322 245799999999988776 67999999642 222213 57778889999999986
No 280
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=73.87 E-value=2.2 Score=39.25 Aligned_cols=54 Identities=20% Similarity=0.270 Sum_probs=37.9
Q ss_pred eEEE-EccCCC-C-CCCCCcccEEEeccccCC-----------CC-hHHHHHHHHhcccCCcEEEEEec
Q 022411 43 IITQ-ASSLSQ-L-PVESFSIDTVLSISSSHE-----------LP-GDQLLEEISRVLKPGGTILIYKK 96 (297)
Q Consensus 43 v~~~-~~d~~~-L-p~~d~sfD~Vls~~~~~~-----------~~-~~~~L~ei~RvLKPGG~l~i~~~ 96 (297)
...+ .+|... | .+++++||+|+.--.+.. +. ....+.++.|+|+|||.+++...
T Consensus 39 ~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~ 107 (319)
T 1eg2_A 39 RHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGG 107 (319)
T ss_dssp EEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 4455 777642 2 245789999998754321 11 35778899999999999988754
No 281
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=72.43 E-value=1.7 Score=50.64 Aligned_cols=41 Identities=17% Similarity=0.169 Sum_probs=16.1
Q ss_pred CCCcccEEEeccccCCCC-hHHHHHHHHhcccCCcEEEEEec
Q 022411 56 ESFSIDTVLSISSSHELP-GDQLLEEISRVLKPGGTILIYKK 96 (297)
Q Consensus 56 ~d~sfD~Vls~~~~~~~~-~~~~L~ei~RvLKPGG~l~i~~~ 96 (297)
...+||+|++..++|-.+ ....|.++.++|||||++++.+.
T Consensus 1308 ~~~~ydlvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1308 SLGKADLLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp ----CCEEEEECC--------------------CCEEEEEEC
T ss_pred CCCceeEEEEcccccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence 456799999998888665 67789999999999999988764
No 282
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=70.57 E-value=1.1 Score=39.73 Aligned_cols=63 Identities=11% Similarity=-0.073 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHhhhc--CCCeEEEEccCCCC-C-CCC--CcccEEEeccccCCCChHHHHHHHHhcccC
Q 022411 25 LNAIRDLGDEAVEQC--DPQIITQASSLSQL-P-VES--FSIDTVLSISSSHELPGDQLLEEISRVLKP 87 (297)
Q Consensus 25 se~m~~~A~~~~~~~--~~~v~~~~~d~~~L-p-~~d--~sfD~Vls~~~~~~~~~~~~L~ei~RvLKP 87 (297)
++.+++.|+++++.. ..++.++.+|+..+ + +++ ++||+|++...+++......+++..+.|++
T Consensus 121 l~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~~fD~V~~dP~~~~~~~sa~vkk~~~~l~~ 189 (258)
T 2r6z_A 121 LSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQGKPDIVYLDPMYPERRKSAAVKKEMAYFHR 189 (258)
T ss_dssp HHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHCCCSEEEECCCC-------------HHHHH
T ss_pred HHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCCCccEEEECCCCCCcccchHHHHHHHHhhh
Confidence 338888887765432 23599999999864 3 455 789999998765543222233344444444
No 283
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=68.07 E-value=5.4 Score=41.01 Aligned_cols=53 Identities=17% Similarity=0.125 Sum_probs=40.1
Q ss_pred CCCeEEEEccCCCCCCC-----CCcccEEEeccccCCC---ChHHHHHHHHhcccCCcEEE
Q 022411 40 DPQIITQASSLSQLPVE-----SFSIDTVLSISSSHEL---PGDQLLEEISRVLKPGGTIL 92 (297)
Q Consensus 40 ~~~v~~~~~d~~~Lp~~-----d~sfD~Vls~~~~~~~---~~~~~L~ei~RvLKPGG~l~ 92 (297)
...|+++.++++.+.++ .+.+|+|+|-..-... .....|.-+.|.|||||.++
T Consensus 471 ~d~VtVI~gd~eev~lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 471 KRRVTIIESDMRSLPGIAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp TTCSEEEESCGGGHHHHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred CCeEEEEeCchhhcccccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 45699999999988774 5789999997632111 12457777889999999876
No 284
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=67.19 E-value=1 Score=40.26 Aligned_cols=49 Identities=12% Similarity=-0.068 Sum_probs=31.6
Q ss_pred CCeEEEEccCCC-CCCCCCcccEEEeccccCCCChHHHHHHHHhcccCCc
Q 022411 41 PQIITQASSLSQ-LPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPGG 89 (297)
Q Consensus 41 ~~v~~~~~d~~~-Lp~~d~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG 89 (297)
.+++++.+|... ++.-...||+|+....+++-....++++..++|++.+
T Consensus 145 ~~i~~~~~D~~~~L~~~~~~fDvV~lDP~y~~~~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 145 ERLQLIHASSLTALTDITPRPQVVYLDPMFPHKQKSALVKKEMRVFQSLV 194 (258)
T ss_dssp HHEEEEESCHHHHSTTCSSCCSEEEECCCCCCCCC-----HHHHHHHHHS
T ss_pred cCEEEEECCHHHHHHhCcccCCEEEEcCCCCCcccchHHHHHHHHHHHhh
Confidence 468999998865 3422247999999876665433456778888888866
No 285
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=65.19 E-value=2 Score=38.62 Aligned_cols=52 Identities=10% Similarity=-0.025 Sum_probs=39.6
Q ss_pred ccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCC-cccEEEeccccCC
Q 022411 18 ILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESF-SIDTVLSISSSHE 71 (297)
Q Consensus 18 ~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~-sfD~Vls~~~~~~ 71 (297)
.|+..|+.+.|++.++++.. ..++.++.+|+..+++++. .||.|+++..++.
T Consensus 70 ~V~avEid~~~~~~l~~~~~--~~~v~vi~~D~l~~~~~~~~~~~~iv~NlPy~i 122 (271)
T 3fut_A 70 EVTAIEKDLRLRPVLEETLS--GLPVRLVFQDALLYPWEEVPQGSLLVANLPYHI 122 (271)
T ss_dssp CEEEEESCGGGHHHHHHHTT--TSSEEEEESCGGGSCGGGSCTTEEEEEEECSSC
T ss_pred EEEEEECCHHHHHHHHHhcC--CCCEEEEECChhhCChhhccCccEEEecCcccc
Confidence 34455677788888887654 3589999999999988764 7899999876553
No 286
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=62.42 E-value=9.6 Score=34.63 Aligned_cols=56 Identities=16% Similarity=0.115 Sum_probs=37.2
Q ss_pred CeEEEEccCCCCCCCCCcccEEEeccccC----CCC-h--HHHHHHHHhcccCC--cEEEEEecC
Q 022411 42 QIITQASSLSQLPVESFSIDTVLSISSSH----ELP-G--DQLLEEISRVLKPG--GTILIYKKL 97 (297)
Q Consensus 42 ~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~----~~~-~--~~~L~ei~RvLKPG--G~l~i~~~~ 97 (297)
++.+...++.-..++...||+|+|-.+.+ +.. . -.+|.-..++|+|| |.|++..+.
T Consensus 139 ~ii~~~~~~dv~~l~~~~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 139 NLIRFKDKTDVFNMEVIPGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp GGEEEECSCCGGGSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred ceEEeeCCcchhhcCCCCcCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 33444433333445678999999977655 222 1 23566667999999 999998876
No 287
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=62.32 E-value=2 Score=38.08 Aligned_cols=62 Identities=10% Similarity=0.089 Sum_probs=43.4
Q ss_pred cCceEEEeecCCc------------cChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCC----CcccEEEecccc
Q 022411 6 MQSAVLALSEDKI------------LPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVES----FSIDTVLSISSS 69 (297)
Q Consensus 6 ~~~~VLll~~~~~------------vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d----~sfD~Vls~~~~ 69 (297)
.|++||=+-.|+. |+..|+.+.|++.++++... ..++.++.+|+..+++++ ..|| |+++..+
T Consensus 29 ~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~-~~~v~~i~~D~~~~~~~~~~~~~~~~-vv~NlPY 106 (255)
T 3tqs_A 29 KTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQ-QKNITIYQNDALQFDFSSVKTDKPLR-VVGNLPY 106 (255)
T ss_dssp TTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTT-CTTEEEEESCTTTCCGGGSCCSSCEE-EEEECCH
T ss_pred CcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhh-CCCcEEEEcchHhCCHHHhccCCCeE-EEecCCc
Confidence 3556666644433 33457788999999887654 568999999999998764 4688 6666543
No 288
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=57.89 E-value=28 Score=31.81 Aligned_cols=54 Identities=11% Similarity=0.047 Sum_probs=35.3
Q ss_pred EEEEccCCCCCCCCCcccEEEeccccC----CCC---hHHHHHHHHhcccCC-cEEEEEecC
Q 022411 44 ITQASSLSQLPVESFSIDTVLSISSSH----ELP---GDQLLEEISRVLKPG-GTILIYKKL 97 (297)
Q Consensus 44 ~~~~~d~~~Lp~~d~sfD~Vls~~~~~----~~~---~~~~L~ei~RvLKPG-G~l~i~~~~ 97 (297)
......+.-..+....||+|++-.+.+ ... ...+|.-..++|+|| |.|++..+.
T Consensus 132 v~~~~~~di~~l~~~~~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 132 VKFKDKSNVFTMPTEPSDTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp EEEECSCCTTTSCCCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred EEeecCceeeecCCCCcCEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 333333333345578999999976544 111 124566668999999 999998776
No 289
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=56.21 E-value=2.6 Score=38.47 Aligned_cols=51 Identities=10% Similarity=0.067 Sum_probs=38.9
Q ss_pred CccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCC--CCC---CcccEEEecc
Q 022411 17 KILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLP--VES---FSIDTVLSIS 67 (297)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp--~~d---~sfD~Vls~~ 67 (297)
..|+..|.++.|++.|+++++....++.++++++..++ +.. .+||.|++..
T Consensus 51 ~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~~~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 51 CRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDGILMDL 106 (301)
T ss_dssp CEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEEEEEEEC
T ss_pred CEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHHhcCCCCCCEEEEcC
Confidence 34556688899999999877554468999999998876 222 5899999865
No 290
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=56.12 E-value=32 Score=32.37 Aligned_cols=79 Identities=13% Similarity=0.082 Sum_probs=49.7
Q ss_pred CCCeEEEEccCCCCCCCCCcccEEEeccccCCCChHHHHHHHHhcccCC---cEEEEEec-CCCCccchHHHHHHHHHHH
Q 022411 40 DPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPG---GTILIYKK-LTSDKGDVDKAISALEGKL 115 (297)
Q Consensus 40 ~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPG---G~l~i~~~-~~~~~g~~~~~~~~l~~~L 115 (297)
.++|.++++|+..+..+...||+|+|-.+.. +...+.-+.+.|..+ +.++.... .......+......+...+
T Consensus 251 ~~~V~~~~~d~~~~~~~~~~~D~vvsDm~~~---p~~~~~l~~~wl~~~~~~~aI~~lKL~mk~~~~~l~~~~~~i~~~l 327 (375)
T 4auk_A 251 TGQVTWLREDGFKFRPTRSNISWMVCDMVEK---PAKVAALMAQWLVNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQL 327 (375)
T ss_dssp TTCEEEECSCTTTCCCCSSCEEEEEECCSSC---HHHHHHHHHHHHHTTSCSEEEEEEECCSSSHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEeCccccccCCCCCcCEEEEcCCCC---hHHhHHHHHHHHhccccceEEEEEEecccchHHHHHHHHHHHHHHH
Confidence 4689999999988877788999999976543 344444444544444 55443332 2221222334455667788
Q ss_pred HHCCcc
Q 022411 116 LLAGFL 121 (297)
Q Consensus 116 ~laGFv 121 (297)
..+||.
T Consensus 328 ~~~g~~ 333 (375)
T 4auk_A 328 DEHGIN 333 (375)
T ss_dssp HHTTCC
T ss_pred HhcCcc
Confidence 889986
No 291
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=55.95 E-value=13 Score=34.69 Aligned_cols=55 Identities=22% Similarity=0.141 Sum_probs=37.7
Q ss_pred CCeEEEEccCCCCC-CCCCcccEEEeccc-------c-------CC-CC----------hHHHHHHHHhcccCCcEEEEE
Q 022411 41 PQIITQASSLSQLP-VESFSIDTVLSISS-------S-------HE-LP----------GDQLLEEISRVLKPGGTILIY 94 (297)
Q Consensus 41 ~~v~~~~~d~~~Lp-~~d~sfD~Vls~~~-------~-------~~-~~----------~~~~L~ei~RvLKPGG~l~i~ 94 (297)
.++.+...|...++ +..+.||.|+.-.. . .| .. ...+|....+.|||||+|+..
T Consensus 204 ~~v~v~~~D~~~~~~~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYs 283 (359)
T 4fzv_A 204 NQVRVTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYS 283 (359)
T ss_dssp SSEEEECCCGGGHHHHSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred CceEEEeCchhhcchhccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEE
Confidence 46788888877664 45678999996321 0 01 00 035778889999999999877
Q ss_pred e
Q 022411 95 K 95 (297)
Q Consensus 95 ~ 95 (297)
+
T Consensus 284 T 284 (359)
T 4fzv_A 284 T 284 (359)
T ss_dssp E
T ss_pred e
Confidence 5
No 292
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=52.26 E-value=24 Score=32.36 Aligned_cols=61 Identities=18% Similarity=0.140 Sum_probs=38.7
Q ss_pred CcccEEEeccc----cCC-C---C----hHHHHHHHHhcccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCccccc
Q 022411 58 FSIDTVLSISS----SHE-L---P----GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQ 124 (297)
Q Consensus 58 ~sfD~Vls~~~----~~~-~---~----~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~ 124 (297)
..||+|++... .|+ - + ..-++.-..++|+|||.|++..+..+ +...+.+. .....-|..+.
T Consensus 205 ~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvygga-----Dr~se~lv-~~LaR~F~~Vr 277 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGYA-----DRASESII-GAIARQFKFSR 277 (320)
T ss_dssp CCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCCC-----SHHHHHHH-HHHHTTEEEEE
T ss_pred CcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecCC-----cccHHHHH-HHHHHhcceee
Confidence 56999999763 333 1 1 13366778899999999999988753 11122343 34456676654
No 293
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=50.15 E-value=64 Score=29.01 Aligned_cols=52 Identities=21% Similarity=0.137 Sum_probs=34.2
Q ss_pred EEEEc-cCCCCCCCCCcccEEEeccccC---C-CC-h--HHHHHHHHhcccCCc-EEEEEecC
Q 022411 44 ITQAS-SLSQLPVESFSIDTVLSISSSH---E-LP-G--DQLLEEISRVLKPGG-TILIYKKL 97 (297)
Q Consensus 44 ~~~~~-d~~~Lp~~d~sfD~Vls~~~~~---~-~~-~--~~~L~ei~RvLKPGG-~l~i~~~~ 97 (297)
.++++ |+..++ ...||+|+|-.+-. + .+ . -.+|.-..+.|+||| .|++..+.
T Consensus 125 ~~~~G~Df~~~~--~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 125 TMKSGVDVFYKP--SEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp EEECSCCGGGSC--CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred EeeccCCccCCC--CCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 44446 887643 56899999976432 1 11 1 124555568999999 99988776
No 294
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=46.46 E-value=15 Score=34.72 Aligned_cols=89 Identities=15% Similarity=0.038 Sum_probs=55.4
Q ss_pred CceEEEeecCCccChH-------------HHHHHHHHHHHHHhhh---------cCCCeEEEEccCCCC----CCCCCcc
Q 022411 7 QSAVLALSEDKILPVS-------------AVLNAIRDLGDEAVEQ---------CDPQIITQASSLSQL----PVESFSI 60 (297)
Q Consensus 7 ~~~VLll~~~~~vt~~-------------dlse~m~~~A~~~~~~---------~~~~v~~~~~d~~~L----p~~d~sf 60 (297)
..+||++--|...+.. ++-+++++.+++-... ..+++..+.+|+... .-....|
T Consensus 206 pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~y 285 (381)
T 3c6k_A 206 GKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREF 285 (381)
T ss_dssp TCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCCE
T ss_pred CCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCce
Confidence 3478888666544433 4445777777763211 124578888887532 1134679
Q ss_pred cEEEeccccC-------CCC----hHHHHHHHHhcccCCcEEEEEe
Q 022411 61 DTVLSISSSH-------ELP----GDQLLEEISRVLKPGGTILIYK 95 (297)
Q Consensus 61 D~Vls~~~~~-------~~~----~~~~L~ei~RvLKPGG~l~i~~ 95 (297)
|+|+.-..-. ... ...+++.+.++|+|||.++.+.
T Consensus 286 DvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 286 DYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp EEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred eEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 9999764211 111 2567888999999999998764
No 295
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=41.36 E-value=15 Score=36.65 Aligned_cols=69 Identities=17% Similarity=0.290 Sum_probs=44.5
Q ss_pred eEEEEccCCC-CC-C--C-CCcccEEEec-cccCCCC---hHHHHHHHHhcccCCcEEEEEecCCCCccchHHHHHHHHH
Q 022411 43 IITQASSLSQ-LP-V--E-SFSIDTVLSI-SSSHELP---GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEG 113 (297)
Q Consensus 43 v~~~~~d~~~-Lp-~--~-d~sfD~Vls~-~~~~~~~---~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~ 113 (297)
+....+|+.. ++ + . ...||+|+.- ++...-| ...++.+++|.++|||++.-.... ..+++
T Consensus 158 l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~~~-----------~~vr~ 226 (676)
T 3ps9_A 158 LDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTSA-----------GFVRR 226 (676)
T ss_dssp EEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEESCCC-----------HHHHH
T ss_pred EEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEeccCc-----------HHHHH
Confidence 4455666642 22 1 1 4679999873 2211111 468999999999999998733221 16778
Q ss_pred HHHHCCccc
Q 022411 114 KLLLAGFLD 122 (297)
Q Consensus 114 ~L~laGFv~ 122 (297)
.|..+||..
T Consensus 227 ~L~~aGf~v 235 (676)
T 3ps9_A 227 GLQDAGFTM 235 (676)
T ss_dssp HHHHHTCEE
T ss_pred HHHhCCeEE
Confidence 899999964
No 296
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=41.03 E-value=32 Score=31.82 Aligned_cols=54 Identities=19% Similarity=0.082 Sum_probs=37.1
Q ss_pred EEEEccCCCCCCCCCcccEEEecccc----C-------CCC-hHHHHHHHHhcccCCcEEEEEecCC
Q 022411 44 ITQASSLSQLPVESFSIDTVLSISSS----H-------ELP-GDQLLEEISRVLKPGGTILIYKKLT 98 (297)
Q Consensus 44 ~~~~~d~~~Lp~~d~sfD~Vls~~~~----~-------~~~-~~~~L~ei~RvLKPGG~l~i~~~~~ 98 (297)
.++++|...+. ....||+|+|-.+- + ... -+.++.=+.+.|+|||.|++..+..
T Consensus 155 ~~IqGD~~~~~-~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQG 220 (344)
T 3r24_A 155 STLIGDCATVH-TANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH 220 (344)
T ss_dssp EEEESCGGGEE-ESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS
T ss_pred eEEEccccccc-cCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecC
Confidence 44788876543 34789999996531 1 112 2556666778999999999998764
No 297
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=40.98 E-value=4.2 Score=38.87 Aligned_cols=89 Identities=11% Similarity=0.095 Sum_probs=55.5
Q ss_pred CceEEEeecCC------------ccChHHHHHHHHHHHHHHhhhc--C-CCeEEEEccCCCC-CC-CCCcccEEEecccc
Q 022411 7 QSAVLALSEDK------------ILPVSAVLNAIRDLGDEAVEQC--D-PQIITQASSLSQL-PV-ESFSIDTVLSISSS 69 (297)
Q Consensus 7 ~~~VLll~~~~------------~vt~~dlse~m~~~A~~~~~~~--~-~~v~~~~~d~~~L-p~-~d~sfD~Vls~~~~ 69 (297)
|.+||-|.-|+ .|+..|.++.|++.|+++++.. . .++.++++|+... +. ++.+||+|++.-..
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lDPPr 173 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVDPAR 173 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEECCEE
T ss_pred CCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEECCCC
Confidence 56677665543 3445577889999999887643 2 5799999999864 42 34689999996421
Q ss_pred C--------CCC-hHHHHHHHHhcccCC-cEEEEEe
Q 022411 70 H--------ELP-GDQLLEEISRVLKPG-GTILIYK 95 (297)
Q Consensus 70 ~--------~~~-~~~~L~ei~RvLKPG-G~l~i~~ 95 (297)
. .+. ...-+.++.+.|... ..++|..
T Consensus 174 r~~~~grv~~led~~P~l~~~~~~l~~~~~~~~vK~ 209 (410)
T 3ll7_A 174 RSGADKRVYAIADCEPDLIPLATELLPFCSSILAKL 209 (410)
T ss_dssp C-----CCCCGGGEESCHHHHHHHHGGGSSEEEEEE
T ss_pred cCCCCceEEehhhcCCCHHHHHHHHHhhCCcEEEEc
Confidence 1 111 122356677755544 4444433
No 298
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=39.43 E-value=11 Score=34.43 Aligned_cols=46 Identities=30% Similarity=0.285 Sum_probs=32.3
Q ss_pred CCCCCCcccEEEeccc----cCCCC--------hHHHHHHHHhcccCCcEEEEEecCC
Q 022411 53 LPVESFSIDTVLSISS----SHELP--------GDQLLEEISRVLKPGGTILIYKKLT 98 (297)
Q Consensus 53 Lp~~d~sfD~Vls~~~----~~~~~--------~~~~L~ei~RvLKPGG~l~i~~~~~ 98 (297)
+|-.-+.||+|+.+.. .||.. .+.+-....+.|+|||.+++.-.+-
T Consensus 205 ~P~~~grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGy 262 (324)
T 3trk_A 205 LPATLGRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGY 262 (324)
T ss_dssp CCGGGCCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCC
T ss_pred CCCcCCceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeecc
Confidence 3544579999999853 34432 1345566789999999999887653
No 299
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0
Probab=39.27 E-value=8.7 Score=33.01 Aligned_cols=9 Identities=56% Similarity=1.150 Sum_probs=7.3
Q ss_pred CCCCCcc-cc
Q 022411 234 QSACGMW-TW 242 (297)
Q Consensus 234 ~ssCGnC-AF 242 (297)
++.|||| ||
T Consensus 19 Qg~cGSCWAf 28 (222)
T 3u8e_A 19 QGACGMCWAF 28 (222)
T ss_dssp CCSCSSCTTT
T ss_pred CCCCccHHHH
Confidence 6899999 54
No 300
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X
Probab=38.85 E-value=7.3 Score=34.33 Aligned_cols=7 Identities=29% Similarity=0.501 Sum_probs=6.3
Q ss_pred CCCCCcc
Q 022411 234 QSACGMW 240 (297)
Q Consensus 234 ~ssCGnC 240 (297)
+++||||
T Consensus 28 Qg~CGSC 34 (265)
T 2wbf_X 28 QGNCDTS 34 (265)
T ss_dssp CTTSSCH
T ss_pred CCCChhH
Confidence 6899999
No 301
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=38.31 E-value=19 Score=32.03 Aligned_cols=57 Identities=14% Similarity=0.095 Sum_probs=42.2
Q ss_pred CCCeEEEEccCC-CCC-----CCCCcccEEEeccccCCCChHHHHHHHHhcccCCcEEEEEecC
Q 022411 40 DPQIITQASSLS-QLP-----VESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKL 97 (297)
Q Consensus 40 ~~~v~~~~~d~~-~Lp-----~~d~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPGG~l~i~~~~ 97 (297)
..+|.++.|++. .|| .+...||+|+.-... +-+....+..++..|+|||.+++-+..
T Consensus 157 ~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~-Y~~t~~~le~~~p~l~~GGvIv~DD~~ 219 (257)
T 3tos_A 157 TQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL-YEPTKAVLEAIRPYLTKGSIVAFDELD 219 (257)
T ss_dssp CCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC-HHHHHHHHHHHGGGEEEEEEEEESSTT
T ss_pred CCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc-cchHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 468999999885 344 235579999887632 222456789999999999999987764
No 302
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ...
Probab=38.16 E-value=7.6 Score=33.21 Aligned_cols=7 Identities=43% Similarity=0.885 Sum_probs=6.3
Q ss_pred CCCCCcc
Q 022411 234 QSACGMW 240 (297)
Q Consensus 234 ~ssCGnC 240 (297)
++.||||
T Consensus 19 Qg~cGsC 25 (215)
T 3i06_A 19 QGQCGSC 25 (215)
T ss_dssp CCSSCCH
T ss_pred CCCCccH
Confidence 6899999
No 303
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A*
Probab=37.33 E-value=7.9 Score=33.09 Aligned_cols=9 Identities=44% Similarity=0.962 Sum_probs=7.2
Q ss_pred CCCCCcc-cc
Q 022411 234 QSACGMW-TW 242 (297)
Q Consensus 234 ~ssCGnC-AF 242 (297)
+++||+| ||
T Consensus 20 Qg~cGsCWAf 29 (220)
T 8pch_A 20 QGSCGSCWTF 29 (220)
T ss_dssp CTTSCCHHHH
T ss_pred cCCCchHHHH
Confidence 6899999 44
No 304
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ...
Probab=37.21 E-value=7.8 Score=32.99 Aligned_cols=7 Identities=43% Similarity=0.885 Sum_probs=6.3
Q ss_pred CCCCCcc
Q 022411 234 QSACGMW 240 (297)
Q Consensus 234 ~ssCGnC 240 (297)
+++||||
T Consensus 19 Qg~cGsC 25 (215)
T 3kwz_A 19 QGQCGSC 25 (215)
T ss_dssp CTTSBCH
T ss_pred CCCCcHH
Confidence 6899999
No 305
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A*
Probab=37.17 E-value=7.9 Score=33.00 Aligned_cols=7 Identities=43% Similarity=0.947 Sum_probs=6.3
Q ss_pred CCCCCcc
Q 022411 234 QSACGMW 240 (297)
Q Consensus 234 ~ssCGnC 240 (297)
+++||||
T Consensus 19 Qg~cGsC 25 (208)
T 1o0e_A 19 QGSCGSC 25 (208)
T ss_dssp CCSSBCH
T ss_pred CCCCccH
Confidence 6899999
No 306
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya}
Probab=37.10 E-value=7.9 Score=36.35 Aligned_cols=9 Identities=33% Similarity=0.796 Sum_probs=7.4
Q ss_pred CCCCCcc-cc
Q 022411 234 QSACGMW-TW 242 (297)
Q Consensus 234 ~ssCGnC-AF 242 (297)
+++|||| ||
T Consensus 170 QG~CGSCWAF 179 (363)
T 3tnx_A 170 QGSCGSAWAF 179 (363)
T ss_dssp CCSSBCHHHH
T ss_pred CCcCCchhhh
Confidence 6899999 54
No 307
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ...
Probab=36.98 E-value=8 Score=33.15 Aligned_cols=7 Identities=43% Similarity=0.885 Sum_probs=6.3
Q ss_pred CCCCCcc
Q 022411 234 QSACGMW 240 (297)
Q Consensus 234 ~ssCGnC 240 (297)
+++||||
T Consensus 19 Qg~cGsC 25 (220)
T 2xu3_A 19 QGQCGSC 25 (220)
T ss_dssp CCSSBCH
T ss_pred cCcccHH
Confidence 6899999
No 308
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ...
Probab=36.93 E-value=8.1 Score=32.97 Aligned_cols=7 Identities=43% Similarity=0.980 Sum_probs=6.3
Q ss_pred CCCCCcc
Q 022411 234 QSACGMW 240 (297)
Q Consensus 234 ~ssCGnC 240 (297)
+++||+|
T Consensus 20 Qg~cGsC 26 (218)
T 3ovx_A 20 QGSCGAC 26 (218)
T ss_dssp CTTSCCH
T ss_pred CCCCccH
Confidence 6899999
No 309
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1
Probab=36.66 E-value=8.1 Score=32.98 Aligned_cols=7 Identities=43% Similarity=0.918 Sum_probs=6.4
Q ss_pred CCCCCcc
Q 022411 234 QSACGMW 240 (297)
Q Consensus 234 ~ssCGnC 240 (297)
+++||+|
T Consensus 19 Qg~cGsC 25 (213)
T 3ioq_A 19 QGGCGSC 25 (213)
T ss_dssp CTTSBCH
T ss_pred CCCChhH
Confidence 6899999
No 310
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0
Probab=36.65 E-value=8.2 Score=35.59 Aligned_cols=7 Identities=43% Similarity=0.838 Sum_probs=6.4
Q ss_pred CCCCCcc
Q 022411 234 QSACGMW 240 (297)
Q Consensus 234 ~ssCGnC 240 (297)
+++||||
T Consensus 134 Qg~CGSC 140 (331)
T 3qj3_A 134 QGSCGSS 140 (331)
T ss_dssp CCSSCCH
T ss_pred Ccccchh
Confidence 6899999
No 311
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=36.49 E-value=21 Score=35.69 Aligned_cols=44 Identities=23% Similarity=0.314 Sum_probs=31.2
Q ss_pred CCCCCCcccEEEeccc----cCCCC--------hHHHHHHHHhcccCCcEEEEEecC
Q 022411 53 LPVESFSIDTVLSISS----SHELP--------GDQLLEEISRVLKPGGTILIYKKL 97 (297)
Q Consensus 53 Lp~~d~sfD~Vls~~~----~~~~~--------~~~~L~ei~RvLKPGG~l~i~~~~ 97 (297)
+| +...||+|+.+.. .||.. ...+-....+.|+|||.+++.-.+
T Consensus 216 ~p-~~~ryDlvfvn~~t~yr~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~YG 271 (670)
T 4gua_A 216 FP-PQARYDLVFINIGTKYRNHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVKSYG 271 (670)
T ss_dssp CC-CCCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESC
T ss_pred CC-CCCcccEEEEecCCCcccchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEEee
Confidence 45 3468999998853 34432 134556678999999999988765
No 312
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ...
Probab=36.44 E-value=8.3 Score=32.94 Aligned_cols=7 Identities=43% Similarity=0.947 Sum_probs=6.4
Q ss_pred CCCCCcc
Q 022411 234 QSACGMW 240 (297)
Q Consensus 234 ~ssCGnC 240 (297)
++.||||
T Consensus 19 Qg~CGsC 25 (212)
T 2cio_A 19 QGSCGSC 25 (212)
T ss_dssp CCSSBCH
T ss_pred CCccchH
Confidence 6899999
No 313
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=36.08 E-value=27 Score=34.85 Aligned_cols=70 Identities=21% Similarity=0.348 Sum_probs=46.2
Q ss_pred CeEEEEccCC-CCC-CC---CCcccEEEec-cccCCCC---hHHHHHHHHhcccCCcEEEEEecCCCCccchHHHHHHHH
Q 022411 42 QIITQASSLS-QLP-VE---SFSIDTVLSI-SSSHELP---GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALE 112 (297)
Q Consensus 42 ~v~~~~~d~~-~Lp-~~---d~sfD~Vls~-~~~~~~~---~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~ 112 (297)
.+..+.||+. .|+ +. +..||+|+.- ++...-+ ...++.+++|+++|||++.-.... ..++
T Consensus 149 ~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~~~-----------~~vr 217 (689)
T 3pvc_A 149 TLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTFTAA-----------GFVR 217 (689)
T ss_dssp EEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEESCCC-----------HHHH
T ss_pred EEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEeccCc-----------HHHH
Confidence 4556677774 233 21 4689999873 2222212 478999999999999998733211 1677
Q ss_pred HHHHHCCccc
Q 022411 113 GKLLLAGFLD 122 (297)
Q Consensus 113 ~~L~laGFv~ 122 (297)
+.|..+||..
T Consensus 218 ~~l~~aGf~~ 227 (689)
T 3pvc_A 218 RGLQQAGFNV 227 (689)
T ss_dssp HHHHHTTCEE
T ss_pred HHHHhCCeEE
Confidence 8899999964
No 314
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A
Probab=35.97 E-value=8.6 Score=35.18 Aligned_cols=7 Identities=43% Similarity=0.947 Sum_probs=6.4
Q ss_pred CCCCCcc
Q 022411 234 QSACGMW 240 (297)
Q Consensus 234 ~ssCGnC 240 (297)
+++||||
T Consensus 86 Qg~CGSC 92 (317)
T 3pbh_A 86 QGSCGSC 92 (317)
T ss_dssp CCSSCCH
T ss_pred cCCccch
Confidence 6899999
No 315
>3p5u_A Actinidin; SAD, cysteine proteinases, hydrolase; 1.50A {Actinidia arguta} SCOP: d.3.1.1 PDB: 3p5v_A 3p5w_A 3p5x_A 1aec_A* 2act_A
Probab=35.92 E-value=8.5 Score=32.97 Aligned_cols=7 Identities=43% Similarity=0.762 Sum_probs=6.3
Q ss_pred CCCCCcc
Q 022411 234 QSACGMW 240 (297)
Q Consensus 234 ~ssCGnC 240 (297)
++.||+|
T Consensus 19 Qg~cGsC 25 (220)
T 3p5u_A 19 QGQCGSA 25 (220)
T ss_dssp CCSSBCH
T ss_pred CCCChhH
Confidence 6899999
No 316
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1
Probab=35.86 E-value=8.5 Score=32.85 Aligned_cols=7 Identities=43% Similarity=0.861 Sum_probs=6.3
Q ss_pred CCCCCcc
Q 022411 234 QSACGMW 240 (297)
Q Consensus 234 ~ssCGnC 240 (297)
++.||||
T Consensus 19 Qg~cGsC 25 (214)
T 1m6d_A 19 QGMCGSC 25 (214)
T ss_dssp CCSSBCH
T ss_pred CCCCchH
Confidence 6899999
No 317
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1
Probab=35.77 E-value=8.6 Score=32.95 Aligned_cols=7 Identities=43% Similarity=0.871 Sum_probs=6.3
Q ss_pred CCCCCcc
Q 022411 234 QSACGMW 240 (297)
Q Consensus 234 ~ssCGnC 240 (297)
+++||||
T Consensus 19 Qg~cGsC 25 (215)
T 1iwd_A 19 QKQCGSC 25 (215)
T ss_dssp CCSSBCH
T ss_pred CCCCchH
Confidence 6899999
No 318
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A*
Probab=35.76 E-value=8.6 Score=32.93 Aligned_cols=7 Identities=43% Similarity=0.947 Sum_probs=6.3
Q ss_pred CCCCCcc
Q 022411 234 QSACGMW 240 (297)
Q Consensus 234 ~ssCGnC 240 (297)
+++||||
T Consensus 19 Qg~cGsC 25 (216)
T 1ppo_A 19 QGSCGSC 25 (216)
T ss_dssp CCSSBCH
T ss_pred CCcCccH
Confidence 6899999
No 319
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A
Probab=35.69 E-value=8.8 Score=35.06 Aligned_cols=7 Identities=43% Similarity=0.885 Sum_probs=6.4
Q ss_pred CCCCCcc
Q 022411 234 QSACGMW 240 (297)
Q Consensus 234 ~ssCGnC 240 (297)
+++||||
T Consensus 118 Qg~CGSC 124 (314)
T 1by8_A 118 QGQCGSC 124 (314)
T ss_dssp CCSSSCH
T ss_pred CCCCCCc
Confidence 6899999
No 320
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=35.39 E-value=1.7e+02 Score=23.42 Aligned_cols=66 Identities=11% Similarity=0.010 Sum_probs=31.8
Q ss_pred cccEEEeccccCCCChHHHHHHHHhcc-------cCCcE-EEEEecCCCCccchHHHHHHHHHHHHHCCccccc
Q 022411 59 SIDTVLSISSSHELPGDQLLEEISRVL-------KPGGT-ILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQ 124 (297)
Q Consensus 59 sfD~Vls~~~~~~~~~~~~L~ei~RvL-------KPGG~-l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~ 124 (297)
.+|.|+..+..+|......++.+...+ .-.|+ +.+.....+..+....+...+...+...||..+.
T Consensus 70 ~aD~ii~gsP~y~~~~~~~lk~~ld~~~~~~~~~~l~gK~~~~~~t~g~~~~g~~~~~~~l~~~l~~~g~~~~~ 143 (199)
T 2zki_A 70 WADGFAIGSPTRYGNMAGGLKTFLDTTAILWKDNVLYGKPVTFFTEASTVHGGHETTILTMSTYAYHFGMIIVP 143 (199)
T ss_dssp HCSEEEEEEECBTTBCCHHHHHHHHTTHHHHHTTSSTTCEEEEEEEBSSTTSSSSHHHHHHTHHHHHHTCEECC
T ss_pred hCCEEEEECCccccCccHHHHHHHHHhhhcccccccCCCEEEEEEeCCCCCCCHHHHHHHHHHHHHHCCeEEeC
Confidence 478888777655543222233333332 12232 2222222111111233455777788888987664
No 321
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A*
Probab=35.36 E-value=8.9 Score=35.04 Aligned_cols=7 Identities=43% Similarity=0.885 Sum_probs=6.4
Q ss_pred CCCCCcc
Q 022411 234 QSACGMW 240 (297)
Q Consensus 234 ~ssCGnC 240 (297)
+++||||
T Consensus 115 Qg~CGSC 121 (316)
T 1cs8_A 115 QGQCGSC 121 (316)
T ss_dssp CCSSSCH
T ss_pred ccCCccH
Confidence 6899999
No 322
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ...
Probab=35.13 E-value=8.9 Score=33.94 Aligned_cols=7 Identities=43% Similarity=0.824 Sum_probs=6.3
Q ss_pred CCCCCcc
Q 022411 234 QSACGMW 240 (297)
Q Consensus 234 ~ssCGnC 240 (297)
+++||||
T Consensus 29 Qg~CGSC 35 (266)
T 3cbj_A 29 QGSCGSA 35 (266)
T ss_dssp CCSSBCH
T ss_pred CCCcchH
Confidence 6899999
No 323
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A
Probab=35.11 E-value=8.9 Score=33.45 Aligned_cols=7 Identities=43% Similarity=0.866 Sum_probs=6.3
Q ss_pred CCCCCcc
Q 022411 234 QSACGMW 240 (297)
Q Consensus 234 ~ssCGnC 240 (297)
+++||||
T Consensus 36 Qg~CGsC 42 (241)
T 2oul_A 36 QKNCGSC 42 (241)
T ss_dssp CCSSBCH
T ss_pred CccchHH
Confidence 6899999
No 324
>3f5v_A DER P 1 allergen; allergy, asthma, DUST mites, glycoprotein, hydrola protease, secreted, thiol protease; HET: P6G; 1.36A {Dermatophagoides pteronyssinus} PDB: 2as8_A 3rvw_A* 3rvx_A 3rvv_A* 3d6s_A*
Probab=35.08 E-value=8.9 Score=32.84 Aligned_cols=7 Identities=43% Similarity=0.795 Sum_probs=6.4
Q ss_pred CCCCCcc
Q 022411 234 QSACGMW 240 (297)
Q Consensus 234 ~ssCGnC 240 (297)
+++||+|
T Consensus 28 Qg~cGsC 34 (222)
T 3f5v_A 28 QGGCGSA 34 (222)
T ss_dssp CCSSBCH
T ss_pred CCCChhH
Confidence 6899999
No 325
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1
Probab=35.04 E-value=8.9 Score=32.95 Aligned_cols=7 Identities=43% Similarity=0.918 Sum_probs=6.3
Q ss_pred CCCCCcc
Q 022411 234 QSACGMW 240 (297)
Q Consensus 234 ~ssCGnC 240 (297)
++.||||
T Consensus 21 Qg~cGsC 27 (221)
T 1cqd_A 21 QGGCGSC 27 (221)
T ss_dssp CTTSBCH
T ss_pred CCCCccH
Confidence 6899999
No 326
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1
Probab=34.82 E-value=9.1 Score=35.11 Aligned_cols=7 Identities=43% Similarity=0.947 Sum_probs=6.4
Q ss_pred CCCCCcc
Q 022411 234 QSACGMW 240 (297)
Q Consensus 234 ~ssCGnC 240 (297)
+++||||
T Consensus 125 Qg~CGSC 131 (322)
T 1pci_A 125 QGSCGSC 131 (322)
T ss_dssp CTTSCCH
T ss_pred cccCCcc
Confidence 6899999
No 327
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica}
Probab=34.79 E-value=9.2 Score=34.86 Aligned_cols=7 Identities=43% Similarity=0.738 Sum_probs=6.4
Q ss_pred CCCCCcc
Q 022411 234 QSACGMW 240 (297)
Q Consensus 234 ~ssCGnC 240 (297)
+++||||
T Consensus 110 Qg~CGSC 116 (310)
T 2o6x_A 110 QGNCGSG 116 (310)
T ss_dssp CCSSCCH
T ss_pred CCCCCcc
Confidence 6899999
No 328
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor}
Probab=34.77 E-value=9.1 Score=35.32 Aligned_cols=7 Identities=43% Similarity=0.776 Sum_probs=6.3
Q ss_pred CCCCCcc
Q 022411 234 QSACGMW 240 (297)
Q Consensus 234 ~ssCGnC 240 (297)
+++||||
T Consensus 133 Qg~CGSC 139 (329)
T 3qt4_A 133 QGQCGSS 139 (329)
T ss_dssp CCSSBCH
T ss_pred CCCCcCh
Confidence 5899999
No 329
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana}
Probab=34.76 E-value=9.1 Score=32.77 Aligned_cols=7 Identities=43% Similarity=0.933 Sum_probs=6.3
Q ss_pred CCCCCcc
Q 022411 234 QSACGMW 240 (297)
Q Consensus 234 ~ssCGnC 240 (297)
++.||||
T Consensus 19 Qg~cGsC 25 (214)
T 2bdz_A 19 QNPCGSC 25 (214)
T ss_dssp CTTSBCH
T ss_pred CCCCccH
Confidence 6899999
No 330
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E*
Probab=34.70 E-value=9.1 Score=32.80 Aligned_cols=7 Identities=57% Similarity=1.009 Sum_probs=6.3
Q ss_pred CCCCCcc
Q 022411 234 QSACGMW 240 (297)
Q Consensus 234 ~ssCGnC 240 (297)
++.||+|
T Consensus 19 Qg~cGsC 25 (218)
T 1yal_A 19 QGACGSC 25 (218)
T ss_dssp CCSSBCH
T ss_pred CccchhH
Confidence 6899999
No 331
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens}
Probab=34.43 E-value=9.3 Score=34.90 Aligned_cols=7 Identities=43% Similarity=0.857 Sum_probs=6.4
Q ss_pred CCCCCcc
Q 022411 234 QSACGMW 240 (297)
Q Consensus 234 ~ssCGnC 240 (297)
+++||||
T Consensus 117 Qg~CGSC 123 (315)
T 2c0y_A 117 QGSCGAA 123 (315)
T ss_dssp CTTSCCH
T ss_pred cccCCCc
Confidence 6899999
No 332
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A*
Probab=34.41 E-value=9.4 Score=33.33 Aligned_cols=7 Identities=43% Similarity=0.871 Sum_probs=6.3
Q ss_pred CCCCCcc
Q 022411 234 QSACGMW 240 (297)
Q Consensus 234 ~ssCGnC 240 (297)
++.||||
T Consensus 38 Qg~cGsC 44 (243)
T 3bwk_A 38 QALCGSC 44 (243)
T ss_dssp CCSSCCH
T ss_pred CCCCchH
Confidence 6899999
No 333
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1
Probab=34.19 E-value=9.4 Score=34.92 Aligned_cols=7 Identities=43% Similarity=0.795 Sum_probs=6.3
Q ss_pred CCCCCcc
Q 022411 234 QSACGMW 240 (297)
Q Consensus 234 ~ssCGnC 240 (297)
+++||||
T Consensus 108 Qg~CGSC 114 (312)
T 1xkg_A 108 QGGCGSA 114 (312)
T ss_dssp CCSSBCH
T ss_pred cCCCCcc
Confidence 6889999
No 334
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1
Probab=34.05 E-value=9.5 Score=33.00 Aligned_cols=7 Identities=43% Similarity=0.885 Sum_probs=6.4
Q ss_pred CCCCCcc
Q 022411 234 QSACGMW 240 (297)
Q Consensus 234 ~ssCGnC 240 (297)
+++||+|
T Consensus 20 Qg~cGsC 26 (229)
T 1s4v_A 20 QGQCGSC 26 (229)
T ss_dssp CCSSBCH
T ss_pred CccchHH
Confidence 6899999
No 335
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A*
Probab=33.93 E-value=9.5 Score=35.06 Aligned_cols=7 Identities=71% Similarity=1.094 Sum_probs=6.4
Q ss_pred CCCCCcc
Q 022411 234 QSACGMW 240 (297)
Q Consensus 234 ~ssCGnC 240 (297)
+++||||
T Consensus 94 Qg~CGSC 100 (325)
T 3hhi_A 94 QSACGSC 100 (325)
T ss_dssp CCSSBCH
T ss_pred CCCcccc
Confidence 6899999
No 336
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare}
Probab=33.72 E-value=9.8 Score=33.88 Aligned_cols=7 Identities=43% Similarity=0.876 Sum_probs=6.4
Q ss_pred CCCCCcc
Q 022411 234 QSACGMW 240 (297)
Q Consensus 234 ~ssCGnC 240 (297)
+++||||
T Consensus 22 Qg~CGSC 28 (262)
T 2fo5_A 22 QGKCGSC 28 (262)
T ss_dssp CTTSCCH
T ss_pred CCCCchH
Confidence 6899999
No 337
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A*
Probab=33.58 E-value=9.9 Score=33.33 Aligned_cols=7 Identities=43% Similarity=0.743 Sum_probs=6.3
Q ss_pred CCCCCcc
Q 022411 234 QSACGMW 240 (297)
Q Consensus 234 ~ssCGnC 240 (297)
+++||+|
T Consensus 20 Qg~CGsC 26 (246)
T 2b1m_A 20 QGQCGSG 26 (246)
T ss_dssp CCSSCCH
T ss_pred CCCCchH
Confidence 6899999
No 338
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0
Probab=33.54 E-value=10 Score=32.46 Aligned_cols=7 Identities=43% Similarity=0.852 Sum_probs=6.3
Q ss_pred CCCCCcc
Q 022411 234 QSACGMW 240 (297)
Q Consensus 234 ~ssCGnC 240 (297)
++.||+|
T Consensus 25 Qg~cGsC 31 (224)
T 3f75_A 25 QRDCGSC 31 (224)
T ss_dssp CCSSSCH
T ss_pred CCCCccH
Confidence 5899999
No 339
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa}
Probab=33.50 E-value=9.9 Score=34.13 Aligned_cols=9 Identities=22% Similarity=0.099 Sum_probs=7.1
Q ss_pred CCCCCcc-cc
Q 022411 234 QSACGMW-TW 242 (297)
Q Consensus 234 ~ssCGnC-AF 242 (297)
++.|||| ||
T Consensus 72 QG~CGSCWAF 81 (291)
T 3ois_A 72 QGRIGSCTAN 81 (291)
T ss_dssp CTTSSCHHHH
T ss_pred CCCCccHHHH
Confidence 5789999 44
No 340
>3ny7_A YCHM protein, sulfate transporter; fatty acid biosynthesis(FAB), bicarbonate transport, anion T membrane protein, STAS domain, SLC26; HET: SXM; 1.92A {Escherichia coli}
Probab=33.28 E-value=84 Score=23.63 Aligned_cols=51 Identities=14% Similarity=0.121 Sum_probs=33.4
Q ss_pred EEEeccccCCCC--hHHHHHHHHhcccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCcccc
Q 022411 62 TVLSISSSHELP--GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDA 123 (297)
Q Consensus 62 ~Vls~~~~~~~~--~~~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v 123 (297)
+|+-.....++. .-..|.++++.++.|+.+++....+ .+.+.|..+||.+.
T Consensus 49 vilDl~~v~~iDssgl~~L~~~~~~~~~g~~l~l~~~~~-----------~v~~~l~~~gl~~~ 101 (118)
T 3ny7_A 49 VILKWDAVPVLDAGGLDAFQRFVKRLPEGCELRVCNVEF-----------QPLRTMARAGIQPI 101 (118)
T ss_dssp EEEEEEECCCBCHHHHHHHHHHHHHCCTTCEEEEECCCH-----------HHHHHHHHTTCCCB
T ss_pred EEEEcCCCCeecHHHHHHHHHHHHHHHCCCEEEEecCCH-----------HHHHHHHHcCChhh
Confidence 344333344555 3456777777777788888876542 56678999999753
No 341
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=32.87 E-value=89 Score=27.59 Aligned_cols=37 Identities=14% Similarity=0.278 Sum_probs=25.1
Q ss_pred CcccEEEecccc-CCCChHHHHHHHHhcccCCcEEEEEe
Q 022411 58 FSIDTVLSISSS-HELPGDQLLEEISRVLKPGGTILIYK 95 (297)
Q Consensus 58 ~sfD~Vls~~~~-~~~~~~~~L~ei~RvLKPGG~l~i~~ 95 (297)
+.||+|+..... .++. ...++.|.+..+-||-|++.-
T Consensus 49 ~~yDvIIl~d~~~~~l~-~~~~~~L~~yV~~GGgLi~~g 86 (259)
T 3rht_A 49 AKQDLVILSDYPAERMT-AQAIDQLVTMVKAGCGLVMLG 86 (259)
T ss_dssp HTCSEEEEESCCGGGBC-HHHHHHHHHHHHTTCEEEEEC
T ss_pred hcCCEEEEcCCccccCC-HHHHHHHHHHHHhCCeEEEec
Confidence 479999876432 2344 455667777777899988774
No 342
>3cdw_H Protein 3B, VPG; RNA-dependent RNA polymerase, protein primer vizier viral enzymes involved in replication, transferase-V protein complex; 2.50A {Coxsackievirus B3} PDB: 2bbl_A 2bbp_A
Probab=32.49 E-value=23 Score=20.55 Aligned_cols=20 Identities=10% Similarity=0.054 Sum_probs=13.1
Q ss_pred CCCCCCCCCCCCCCCCCceE
Q 022411 248 RYMPLQGSASIQTGREGVTV 267 (297)
Q Consensus 248 PYlGlPaF~~~~~~~~~~~~ 267 (297)
||-|||--++-.|---.++|
T Consensus 2 ~YsG~p~~~~k~P~lR~a~v 21 (26)
T 3cdw_H 2 AYTGVPNQKPRVPTLRQAKV 21 (26)
T ss_pred CccCCCcccCCCCeeEEEEE
Confidence 89999977766554333333
No 343
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A*
Probab=32.09 E-value=11 Score=33.13 Aligned_cols=7 Identities=57% Similarity=0.952 Sum_probs=6.3
Q ss_pred CCCCCcc
Q 022411 234 QSACGMW 240 (297)
Q Consensus 234 ~ssCGnC 240 (297)
++.||||
T Consensus 25 Qg~CGSC 31 (254)
T 3qsd_A 25 QSRCGSC 31 (254)
T ss_dssp CCSSBCH
T ss_pred cccCccH
Confidence 6899999
No 344
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=30.85 E-value=1.8e+02 Score=22.17 Aligned_cols=110 Identities=12% Similarity=0.066 Sum_probs=52.1
Q ss_pred eEEEeecCCccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCC-CC-cccEEEeccccCCC---ChHHHHHHHHh
Q 022411 9 AVLALSEDKILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVE-SF-SIDTVLSISSSHEL---PGDQLLEEISR 83 (297)
Q Consensus 9 ~VLll~~~~~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~-d~-sfD~Vls~~~~~~~---~~~~~L~ei~R 83 (297)
+|+++.....=+-..+.+.+.+... .....+... ++...+.. -. .+|.|+..+..+.. ..+..+..+++
T Consensus 3 ki~I~y~S~tGnT~~~A~~ia~~l~----~~g~~v~~~--~~~~~~~~~l~~~~d~ii~g~pty~~~~G~~p~~~~~fl~ 76 (148)
T 3f6r_A 3 KVLIVFGSSTGNTESIAQKLEELIA----AGGHEVTLL--NAADASAENLADGYDAVLFGCSAWGMEDLEMQDDFLSLFE 76 (148)
T ss_dssp EEEEEEECSSSHHHHHHHHHHHHHH----TTTCEEEEE--ETTTBCCTTTTTTCSEEEEEECEECSSSCEECHHHHHHHT
T ss_pred eEEEEEECCCchHHHHHHHHHHHHH----hCCCeEEEE--ehhhCCHhHhcccCCEEEEEecccCCCCCCCcHHHHHHHH
Confidence 5666644333234455555544332 212223333 33333221 23 78988877655443 22233445555
Q ss_pred ccc----CCcEEEEEecCCCCccchHHHHHHHHHHHHHCCccccc
Q 022411 84 VLK----PGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQ 124 (297)
Q Consensus 84 vLK----PGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~ 124 (297)
.|+ .|=.+.+...+.+..+....+...+...|...|+..+.
T Consensus 77 ~l~~~~l~~k~~~vfg~G~~~y~~~~~a~~~l~~~l~~~G~~~~~ 121 (148)
T 3f6r_A 77 EFDRIGLAGRKVAAFASGDQEYEHFCGAVPAIEERAKELGATIIA 121 (148)
T ss_dssp TGGGTCCTTCEEEEEEEECTTSSSTTTHHHHHHHHHHHTTCEECS
T ss_pred HhhccCCCCCEEEEEEeCCCCHHHHHHHHHHHHHHHHHcCCEEee
Confidence 543 23333333333222222233455788888889987653
No 345
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C*
Probab=30.34 E-value=12 Score=36.08 Aligned_cols=7 Identities=43% Similarity=0.980 Sum_probs=6.4
Q ss_pred CCCCCcc
Q 022411 234 QSACGMW 240 (297)
Q Consensus 234 ~ssCGnC 240 (297)
+++||||
T Consensus 228 QG~CGSC 234 (441)
T 3pdf_A 228 QASCGSC 234 (441)
T ss_dssp CTTSBCH
T ss_pred cCCCchH
Confidence 6899999
No 346
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=30.18 E-value=2e+02 Score=25.48 Aligned_cols=44 Identities=11% Similarity=0.139 Sum_probs=24.2
Q ss_pred HHHHHHHhcccCCcEEEEEecCCCCccchHHHHHHHHHHHHHCCccc
Q 022411 76 QLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLD 122 (297)
Q Consensus 76 ~~L~ei~RvLKPGG~l~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~ 122 (297)
.+..+..+++.....+++.-.-- ......+..+.......||.-
T Consensus 102 dv~~~~~~l~~aD~iv~~~P~~w---~~~Pa~lK~~iDrv~~~g~ay 145 (280)
T 4gi5_A 102 DIVAEQEKLLWADTVIFQFPLWW---FSMPAIMKGWIDRVYAWGFAY 145 (280)
T ss_dssp HHHHHHHHHHHCSEEEEEEECBT---TBCCHHHHHHHHHHSCBTTTB
T ss_pred HHHHHHHHHHhCCEEEEEecccc---ccCcHHHHHHHHHhcccCcee
Confidence 45566666666776666554322 122233446666666677763
No 347
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=29.72 E-value=1.8e+02 Score=21.97 Aligned_cols=74 Identities=14% Similarity=0.097 Sum_probs=44.3
Q ss_pred eEEEeecCCccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEeccccCCCChHHHHHHHHhcccCC
Q 022411 9 AVLALSEDKILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLKPG 88 (297)
Q Consensus 9 ~VLll~~~~~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~~~~~~~~~~~L~ei~RvLKPG 88 (297)
+|||+..+.-.|.. ++..|.+.|.++ ...+.........+.-....||+|+..--.. -.+.++.....+-
T Consensus 8 kIlL~C~aGmSTsl-lv~km~~~a~~~----gi~v~i~a~~~~~~~~~~~~~DvvLLgPQV~-----y~~~~ik~~~~~~ 77 (108)
T 3nbm_A 8 KVLVLCAGSGTSAQ-LANAINEGANLT----EVRVIANSGAYGAHYDIMGVYDLIILAPQVR-----SYYREMKVDAERL 77 (108)
T ss_dssp EEEEEESSSSHHHH-HHHHHHHHHHHH----TCSEEEEEEETTSCTTTGGGCSEEEECGGGG-----GGHHHHHHHHTTT
T ss_pred eEEEECCCCCCHHH-HHHHHHHHHHHC----CCceEEEEcchHHHHhhccCCCEEEEChHHH-----HHHHHHHHHhhhc
Confidence 68999886655544 888999887653 2345554333333322234599999864222 2356666667776
Q ss_pred cEEE
Q 022411 89 GTIL 92 (297)
Q Consensus 89 G~l~ 92 (297)
|.=+
T Consensus 78 ~ipV 81 (108)
T 3nbm_A 78 GIQI 81 (108)
T ss_dssp TCEE
T ss_pred CCcE
Confidence 6543
No 348
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=26.90 E-value=2.3e+02 Score=23.01 Aligned_cols=65 Identities=11% Similarity=0.051 Sum_probs=32.4
Q ss_pred cccEEEeccccCCCChHHHHHHHHhcc-------cCCc-EE-EEEecCCCCccchHHHHHHHHHHHHHCCccccc
Q 022411 59 SIDTVLSISSSHELPGDQLLEEISRVL-------KPGG-TI-LIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQ 124 (297)
Q Consensus 59 sfD~Vls~~~~~~~~~~~~L~ei~RvL-------KPGG-~l-~i~~~~~~~~g~~~~~~~~l~~~L~laGFv~v~ 124 (297)
.+|.|+..+...|......++.+...+ .-.| .+ ++..... ..+....+...+...+...||..+.
T Consensus 78 ~aD~ii~gsP~y~~~~~~~lk~~ld~~~~~~~~~~l~gK~~~~~~t~g~-~~~~~~~~~~~l~~~l~~~g~~~v~ 151 (211)
T 1ydg_A 78 WAEAIVFSSPTRFGGATSQMRAFIDTLGGLWSSGKLANKTFSAMTSAQN-VNGGQETTLQTLYMTAMHWGAVLTP 151 (211)
T ss_dssp HCSEEEEEEEEETTEECHHHHHHHHTTHHHHHTTTTTTCEEEEEEEESS-TTSSTTHHHHHHHHHHHTTTCEECC
T ss_pred HCCEEEEEcCccccCccHHHHHHHHHhccccccccCCCCEEEEEEeCCC-CCCChHHHHHHHHHHHHHCCCEEeC
Confidence 578888877665544222233333332 1122 22 2222221 1122234555777788888887664
No 349
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=26.49 E-value=30 Score=31.40 Aligned_cols=24 Identities=29% Similarity=0.540 Sum_probs=20.8
Q ss_pred hHHHHHHHHhcccCCcEEEEEecC
Q 022411 74 GDQLLEEISRVLKPGGTILIYKKL 97 (297)
Q Consensus 74 ~~~~L~ei~RvLKPGG~l~i~~~~ 97 (297)
...+|....++|+|||+|.|..+.
T Consensus 212 L~~~L~~a~~~L~~gGrl~visfH 235 (285)
T 1wg8_A 212 LKEFLEQAAEVLAPGGRLVVIAFH 235 (285)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEECS
T ss_pred HHHHHHHHHHHhcCCCEEEEEecC
Confidence 578899999999999999887763
No 350
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=25.73 E-value=31 Score=32.21 Aligned_cols=24 Identities=33% Similarity=0.390 Sum_probs=20.8
Q ss_pred hHHHHHHHHhcccCCcEEEEEecC
Q 022411 74 GDQLLEEISRVLKPGGTILIYKKL 97 (297)
Q Consensus 74 ~~~~L~ei~RvLKPGG~l~i~~~~ 97 (297)
...+|..+.++|+|||+|.|..+-
T Consensus 253 L~~~L~~a~~~L~~gGRl~VISFH 276 (347)
T 3tka_A 253 IEQALKSSLNVLAPGGRLSIISFH 276 (347)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEESS
T ss_pred HHHHHHHHHHHhCCCCEEEEEecC
Confidence 468899999999999999988763
No 351
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=25.12 E-value=18 Score=32.21 Aligned_cols=47 Identities=6% Similarity=-0.024 Sum_probs=33.2
Q ss_pred cChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCc------ccEEEeccc
Q 022411 19 LPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFS------IDTVLSISS 68 (297)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~s------fD~Vls~~~ 68 (297)
|+..|+.+.|++.++++. ..++.++.+|+..+++++-. ...|+++..
T Consensus 71 V~avDid~~~l~~a~~~~---~~~v~~i~~D~~~~~~~~~~~~~~~~~~~vv~NlP 123 (279)
T 3uzu_A 71 LHAVELDRDLIGRLEQRF---GELLELHAGDALTFDFGSIARPGDEPSLRIIGNLP 123 (279)
T ss_dssp EEEEECCHHHHHHHHHHH---GGGEEEEESCGGGCCGGGGSCSSSSCCEEEEEECC
T ss_pred EEEEECCHHHHHHHHHhc---CCCcEEEECChhcCChhHhcccccCCceEEEEccC
Confidence 444566778999888762 56799999999999876531 235666653
No 352
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=24.04 E-value=85 Score=32.83 Aligned_cols=54 Identities=13% Similarity=0.158 Sum_probs=36.2
Q ss_pred EEEEccCCCC-CCCCCcccEEEeccccCC--CC----------------------------hHHHHHHHHhcccCCcEEE
Q 022411 44 ITQASSLSQL-PVESFSIDTVLSISSSHE--LP----------------------------GDQLLEEISRVLKPGGTIL 92 (297)
Q Consensus 44 ~~~~~d~~~L-p~~d~sfD~Vls~~~~~~--~~----------------------------~~~~L~ei~RvLKPGG~l~ 92 (297)
.....++... +.....||+|+++-.+.. .. ...++..+.+.|+|||++.
T Consensus 383 ~I~~dD~L~~~~~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLA 462 (878)
T 3s1s_A 383 TITGEDVCSLNPEDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVIS 462 (878)
T ss_dssp EEECCCGGGCCGGGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEE
T ss_pred eEEecchhcccccccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEE
Confidence 4445555442 334678999999875421 11 1236788999999999998
Q ss_pred EEecC
Q 022411 93 IYKKL 97 (297)
Q Consensus 93 i~~~~ 97 (297)
+..+.
T Consensus 463 fIlP~ 467 (878)
T 3s1s_A 463 AIMPK 467 (878)
T ss_dssp EEEET
T ss_pred EEECh
Confidence 88765
No 353
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=22.51 E-value=12 Score=32.97 Aligned_cols=50 Identities=8% Similarity=-0.038 Sum_probs=36.0
Q ss_pred cChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCC-----cccEEEecccc
Q 022411 19 LPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESF-----SIDTVLSISSS 69 (297)
Q Consensus 19 vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~-----sfD~Vls~~~~ 69 (297)
|+..|+.+.|++.++++... ..++.++.+|+..+++++. ..+.|+++..+
T Consensus 46 v~avEid~~~~~~a~~~~~~-~~~v~~i~~D~~~~~~~~~~~~~~~~~~vvsNlPY 100 (252)
T 1qyr_A 46 LTVIELDRDLAARLQTHPFL-GPKLTIYQQDAMTFNFGELAEKMGQPLRVFGNLPY 100 (252)
T ss_dssp EEEECCCHHHHHHHHTCTTT-GGGEEEECSCGGGCCHHHHHHHHTSCEEEEEECCT
T ss_pred EEEEECCHHHHHHHHHHhcc-CCceEEEECchhhCCHHHhhcccCCceEEEECCCC
Confidence 55667778888888765433 3589999999999887642 34678887654
No 354
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis}
Probab=21.69 E-value=21 Score=33.74 Aligned_cols=7 Identities=29% Similarity=0.406 Sum_probs=6.4
Q ss_pred CCCCCcc
Q 022411 234 QSACGMW 240 (297)
Q Consensus 234 ~ssCGnC 240 (297)
+++||+|
T Consensus 28 Qg~cGsC 34 (383)
T 3pw3_A 28 QNRAGTC 34 (383)
T ss_dssp CCBSSCH
T ss_pred CCCCcHH
Confidence 6899999
No 355
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=21.65 E-value=73 Score=27.54 Aligned_cols=63 Identities=14% Similarity=0.052 Sum_probs=40.9
Q ss_pred CccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCc-ccEEEeccccCCCChHHHHHHHHhc
Q 022411 17 KILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFS-IDTVLSISSSHELPGDQLLEEISRV 84 (297)
Q Consensus 17 ~~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~s-fD~Vls~~~~~~~~~~~~L~ei~Rv 84 (297)
..++..|+.+.|++.++++ ...++.++.+|+..+++++.. ...|+++..++. ...++.++.+.
T Consensus 55 ~~v~avEid~~~~~~~~~~---~~~~v~~i~~D~~~~~~~~~~~~~~vv~NlPy~i--~~~il~~ll~~ 118 (249)
T 3ftd_A 55 KKLYVIELDREMVENLKSI---GDERLEVINEDASKFPFCSLGKELKVVGNLPYNV--ASLIIENTVYN 118 (249)
T ss_dssp SEEEEECCCHHHHHHHTTS---CCTTEEEECSCTTTCCGGGSCSSEEEEEECCTTT--HHHHHHHHHHT
T ss_pred CeEEEEECCHHHHHHHHhc---cCCCeEEEEcchhhCChhHccCCcEEEEECchhc--cHHHHHHHHhc
Confidence 3455667888899888765 345799999999999887642 225666654432 23344455443
No 356
>1gl0_I Protease inhibitor LCMI I; hydrolase/inhibitor, complex (protease/inhibitor), hydrolase, serine protease, serine protease inhibitor; 3.0A {Locusta migratoria} SCOP: g.4.1.1
Probab=21.55 E-value=25 Score=21.86 Aligned_cols=18 Identities=28% Similarity=0.981 Sum_probs=13.7
Q ss_pred CCCCCCC-CccCCCCCccc
Q 022411 195 GDCEVGS-TRKACKNCICG 212 (297)
Q Consensus 195 ~~C~~~~-krkACknCtCG 212 (297)
..|.+|. ++.-|-.|+|.
T Consensus 2 ~~C~PG~~~k~~CN~C~C~ 20 (35)
T 1gl0_I 2 EKCTPGQVKQQDCNTCTCT 20 (35)
T ss_dssp -CCCTTCEEECSSCEEEEC
T ss_pred CccCCCcccccCCCccCCC
Confidence 4688876 57889999996
No 357
>1lrv_A LRV, leucine-rich repeat variant; leucine-rich repeats, repetitive structure, iron sulfur proteins, nitrogen fixation; 2.60A {Azotobacter vinelandii} SCOP: a.118.1.5
Probab=21.53 E-value=25 Score=30.79 Aligned_cols=25 Identities=16% Similarity=0.117 Sum_probs=16.5
Q ss_pred cccCCCCCCC-CCCCCCCCCCCCCce
Q 022411 242 WRCFPLRYMP-LQGSASIQTGREGVT 266 (297)
Q Consensus 242 FRC~~CPYlG-lPaF~~~~~~~~~~~ 266 (297)
.+|++|||.+ +.+=--=.||+-=+.
T Consensus 12 ~~c~~c~~~~~~~~~~~c~~~~~c~~ 37 (244)
T 1lrv_A 12 GDCRVCSFRMSLLLTGRCTPGDACVA 37 (244)
T ss_dssp CCTTTSTTTTTTGGGTSSBTTTBCSS
T ss_pred ccccCCCCcccchhcCCCCCCchHhh
Confidence 6899999999 885533344444433
No 358
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=20.85 E-value=3.4e+02 Score=26.14 Aligned_cols=77 Identities=19% Similarity=0.182 Sum_probs=44.5
Q ss_pred EEEEccCCCCCCC----CCcccEEEeccccC--C-----------CC----hHHHHHHHHhccc-------CCcEEEEEe
Q 022411 44 ITQASSLSQLPVE----SFSIDTVLSISSSH--E-----------LP----GDQLLEEISRVLK-------PGGTILIYK 95 (297)
Q Consensus 44 ~~~~~d~~~Lp~~----d~sfD~Vls~~~~~--~-----------~~----~~~~L~ei~RvLK-------PGG~l~i~~ 95 (297)
....++....|+. ...||+|+++-.+. + .+ .-.+++.+.+.|| |||++.+..
T Consensus 283 ~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVl 362 (530)
T 3ufb_A 283 RIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVV 362 (530)
T ss_dssp EEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEE
T ss_pred cccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEe
Confidence 3445555444432 34799999986542 1 11 1346788888887 799998876
Q ss_pred cCCCCccchHHHHHHHHHHHHHCCccc
Q 022411 96 KLTSDKGDVDKAISALEGKLLLAGFLD 122 (297)
Q Consensus 96 ~~~~~~g~~~~~~~~l~~~L~laGFv~ 122 (297)
+...-... .....+++.|...+.+.
T Consensus 363 P~g~Lf~~--~~~~~iRk~Lle~~~l~ 387 (530)
T 3ufb_A 363 PNGTLFSD--GISARIKEELLKNFNLH 387 (530)
T ss_dssp EHHHHHCC--THHHHHHHHHHHHSEEE
T ss_pred cchhhhcc--chHHHHHHHHhhcCEEE
Confidence 64100000 11235677777666654
No 359
>3tvj_I Protease inhibitor SGPI-2; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Schistocerca gregaria} PDB: 4djz_H 1kgm_A 1gl1_I 1pmc_A
Probab=20.56 E-value=22 Score=22.51 Aligned_cols=19 Identities=42% Similarity=1.108 Sum_probs=15.5
Q ss_pred CCCCCCCC-ccCCCCCccch
Q 022411 195 GDCEVGST-RKACKNCICGR 213 (297)
Q Consensus 195 ~~C~~~~k-rkACknCtCGl 213 (297)
..|.||.. ++-|.-|+|+-
T Consensus 5 ~~C~Pg~tFk~~CNtC~C~~ 24 (38)
T 3tvj_I 5 VTCEPGTTFKDKCNTCRCGS 24 (38)
T ss_dssp CCCCTTCEEEETTEEEEECT
T ss_pred cccCCCCeeeccCceeECCC
Confidence 46988875 88999999974
No 360
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=20.27 E-value=1.6e+02 Score=22.05 Aligned_cols=54 Identities=13% Similarity=0.138 Sum_probs=36.1
Q ss_pred eEEEeecCCccChHHHHHHHHHHHHHHhhhcCCCeEEEEccCCCCCCCCCcccEEEecc
Q 022411 9 AVLALSEDKILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSIS 67 (297)
Q Consensus 9 ~VLll~~~~~vt~~dlse~m~~~A~~~~~~~~~~v~~~~~d~~~Lp~~d~sfD~Vls~~ 67 (297)
+||++......|. -+++.|.+.+++ ....++..+.++..+.-....||+|+...
T Consensus 5 kIll~Cg~G~sTS-~l~~k~~~~~~~----~gi~~~i~a~~~~~~~~~~~~~Dvil~~p 58 (106)
T 1e2b_A 5 HIYLFSSAGMSTS-LLVSKMRAQAEK----YEVPVIIEAFPETLAGEKGQNADVVLLGP 58 (106)
T ss_dssp EEEEECSSSTTTH-HHHHHHHHHHHH----SCCSEEEEEECSSSTTHHHHHCSEEEECT
T ss_pred EEEEECCCchhHH-HHHHHHHHHHHH----CCCCeEEEEecHHHHHhhccCCCEEEEcc
Confidence 6899987766666 566677777653 23456777777766642235689998765
Done!